##gff-version 3
##feature-ontology https://github.com/The-Sequence-Ontology/SO-Ontologies/blob/v3.1/so.obo
# organism Staphylococcus aureus M64191
# Annotated with Bakta
# Software: v1.11.4
# Database: v6.0, full
# DOI: 10.1099/mgen.0.000685
# URL: github.com/oschwengers/bakta
##sequence-region contig_1 1 2870833
contig_1	Bakta	region	1	2870833	.	+	.	ID=contig_1;Name=contig_1
contig_1	Pyrodigal	gene	544	1905	.	+	.	ID=GCA000560365_00001_gene;locus_tag=GCA000560365_00001;gene=dnaA
contig_1	Pyrodigal	CDS	544	1905	.	+	0	ID=GCA000560365_00001;Name=chromosomal replication initiator protein DnaA;locus_tag=GCA000560365_00001;product=chromosomal replication initiator protein DnaA;Dbxref=GO:0003677,GO:0003688,GO:0005524,GO:0005737,GO:0005886,GO:0006270,GO:0006275,GO:0016887;gene=dnaA;Parent=GCA000560365_00001_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0593,COG:L,KEGG:K02313,RefSeq:WP_001290433.1,SO:0001217,UniParc:UPI000005498B,UniRef:UniRef100_Q2G2H5,UniRef:UniRef50_Q2G2H5,UniRef:UniRef90_Q2G2H5;ec_number=3.6.4.-
contig_1	BLAST+	rep_origin	1917	2182	.	?	.	ID=KMHODOBJJH_2861;Name=origin of replication;Note=origin of replication
contig_1	Pyrodigal	gene	2183	3316	.	+	.	ID=GCA000560365_00002_gene;locus_tag=GCA000560365_00002;gene=dnaN
contig_1	Pyrodigal	CDS	2183	3316	.	+	0	ID=GCA000560365_00002;Name=DNA polymerase III subunit beta;locus_tag=GCA000560365_00002;product=DNA polymerase III subunit beta;Dbxref=GO:0003677,GO:0003887,GO:0005737,GO:0006260,GO:0006271,GO:0008408,GO:0009360;gene=dnaN;Parent=GCA000560365_00002_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0592,COG:L,KEGG:K02338,RefSeq:WP_000969811.1,SO:0001217,UniParc:UPI0000050CC9,UniRef:UniRef100_Q5HJZ4,UniRef:UniRef50_Q9RCA1,UniRef:UniRef90_Q5HK00;ec_number=2.7.7.7
contig_1	Pyrodigal	gene	3706	3942	.	+	.	ID=GCA000560365_00003_gene;locus_tag=GCA000560365_00003;gene=ybcJ
contig_1	Pyrodigal	CDS	3706	3942	.	+	0	ID=GCA000560365_00003;Name=S4 domain-containing protein YaaA;locus_tag=GCA000560365_00003;product=S4 domain-containing protein YaaA;gene=ybcJ;Parent=GCA000560365_00003_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2501,COG:J,KEGG:K14761,RefSeq:WP_000249647.1,SO:0001217,UniParc:UPI00006E4540,UniRef:UniRef100_A0A7Z7QWA9,UniRef:UniRef50_A0A028ZHC3,UniRef:UniRef90_A0A7Z7YU32
contig_1	Pyrodigal	gene	3939	5051	.	+	.	ID=GCA000560365_00004_gene;locus_tag=GCA000560365_00004;gene=recF
contig_1	Pyrodigal	CDS	3939	5051	.	+	0	ID=GCA000560365_00004;Name=DNA replication/repair protein RecF;locus_tag=GCA000560365_00004;product=DNA replication/repair protein RecF;Dbxref=GO:0000731,GO:0003697,GO:0005524,GO:0005737,GO:0006260,GO:0006281,GO:0006302,GO:0006310,GO:0009432;gene=recF;Parent=GCA000560365_00004_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1195,COG:L,RefSeq:WP_000775113.1,SO:0001217,UniParc:UPI000005498D,UniRef:UniRef100_Q2G275,UniRef:UniRef50_Q9CE70,UniRef:UniRef90_Q2G275
contig_1	Pyrodigal	gene	5061	6995	.	+	.	ID=GCA000560365_00005_gene;locus_tag=GCA000560365_00005;gene=gyrB
contig_1	Pyrodigal	CDS	5061	6995	.	+	0	ID=GCA000560365_00005;Name=DNA topoisomerase (ATP-hydrolyzing) subunit B;locus_tag=GCA000560365_00005;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;Dbxref=GO:0003677,GO:0003918,GO:0005524,GO:0005694,GO:0005737,GO:0006261,GO:0006265,GO:0034335,GO:0046872;gene=gyrB;Parent=GCA000560365_00005_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0187,COG:L,KEGG:K02470,RefSeq:WP_000255586.1,SO:0001217,UniParc:UPI000005498E,UniRef:UniRef100_Q2FKQ1,UniRef:UniRef50_Q6GKU0,UniRef:UniRef90_Q6GKU0;ec_number=5.6.2.2
contig_1	Pyrodigal	gene	7032	9695	.	+	.	ID=GCA000560365_00006_gene;locus_tag=GCA000560365_00006;gene=gyrA
contig_1	Pyrodigal	CDS	7032	9695	.	+	0	ID=GCA000560365_00006;Name=DNA gyrase subunit A;locus_tag=GCA000560365_00006;product=DNA gyrase subunit A;Dbxref=GO:0003677,GO:0003916,GO:0003918,GO:0005524,GO:0005694,GO:0005737,GO:0006259,GO:0006261,GO:0006265,GO:0009330,GO:0034335,GO:0046677;gene=gyrA;Parent=GCA000560365_00006_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0188,COG:L,KEGG:K02469,RefSeq:WP_000819066.1,SO:0001217,UniParc:UPI0000696B5F,UniRef:UniRef100_Q2FKQ0,UniRef:UniRef50_Q2FKQ0,UniRef:UniRef90_Q2FKQ0;ec_number=5.6.2.2
contig_1	Pyrodigal	gene	9782	10594	.	-	.	ID=GCA000560365_00007_gene;locus_tag=GCA000560365_00007;gene=nnrD
contig_1	Pyrodigal	CDS	9782	10594	.	-	0	ID=GCA000560365_00007;Name=ADP-dependent (S)-NAD(P)H-hydrate dehydratase;locus_tag=GCA000560365_00007;product=ADP-dependent (S)-NAD(P)H-hydrate dehydratase;Dbxref=GO:0005524,GO:0046496,GO:0052855,GO:0052856,GO:0110051;gene=nnrD;Parent=GCA000560365_00007_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0063,COG:F,RefSeq:WP_000449218.1,SO:0001217,UniParc:UPI00000D9B7B,UniRef:UniRef100_Q2G2P8,UniRef:UniRef50_Q2G2P8,UniRef:UniRef90_Q2G2P8;ec_number=4.2.1.136
contig_1	Pyrodigal	gene	10920	12434	.	+	.	ID=GCA000560365_00008_gene;locus_tag=GCA000560365_00008;gene=hutH
contig_1	Pyrodigal	CDS	10920	12434	.	+	0	ID=GCA000560365_00008;Name=histidine ammonia-lyase;locus_tag=GCA000560365_00008;product=histidine ammonia-lyase;Dbxref=GO:0004397,GO:0005737,GO:0006548,GO:0019556,GO:0019557;gene=hutH;Parent=GCA000560365_00008_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2986,COG:E,KEGG:K01745,RefSeq:WP_000177464.1,SO:0001217,UniParc:UPI0000054993,UniRef:UniRef100_Q2G2P7,UniRef:UniRef50_P10944,UniRef:UniRef90_P64415;ec_number=4.3.1.3
contig_1	Infernal	regulatory_region	12514	12723	3.1e-15	+	.	ID=KMHODOBJJH_174;Name=T-box leader;product=T-box leader;Dbxref=RFAM:RF00230;inference=profile:Rfam:RF00230;Note=SO:0000140;regulatory_class=attenuator
contig_1	Pyrodigal	gene	12813	14099	.	+	.	ID=GCA000560365_00009_gene;locus_tag=GCA000560365_00009;gene=serS
contig_1	Pyrodigal	CDS	12813	14099	.	+	0	ID=GCA000560365_00009;Name=serine--tRNA ligase;locus_tag=GCA000560365_00009;product=serine--tRNA ligase;Dbxref=GO:0000166,GO:0004828,GO:0005524,GO:0005737,GO:0006434,GO:0016260,GO:0016740;gene=serS;Parent=GCA000560365_00009_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0172,COG:J,KEGG:K01875,RefSeq:WP_000884334.1,SO:0001217,UniParc:UPI0000054994,UniRef:UniRef100_P95689,UniRef:UniRef50_P95689,UniRef:UniRef90_P95689;ec_number=6.1.1.11
contig_1	Pyrodigal	gene	14749	15444	.	+	.	ID=GCA000560365_00010_gene;locus_tag=GCA000560365_00010;gene=azlC
contig_1	Pyrodigal	CDS	14749	15444	.	+	0	ID=GCA000560365_00010;Name=Branched-chain amino acid ABC transporter permease;locus_tag=GCA000560365_00010;product=Branched-chain amino acid ABC transporter permease;gene=azlC;Parent=GCA000560365_00010_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1296,COG:E,KEGG:K26605,RefSeq:WP_000207105.1,SO:0001217,UniParc:UPI0000696B60,UniRef:UniRef100_Q2G2P6,UniRef:UniRef50_Q2G2P6,UniRef:UniRef90_Q2G2P6
contig_1	Pyrodigal	gene	15441	15770	.	+	.	ID=GCA000560365_00011_gene;locus_tag=GCA000560365_00011;gene=azlD2
contig_1	Pyrodigal	CDS	15441	15770	.	+	0	ID=GCA000560365_00011;Name=AzlD domain-containing protein;locus_tag=GCA000560365_00011;product=AzlD domain-containing protein;gene=azlD2;Parent=GCA000560365_00011_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4392,COG:E,RefSeq:WP_000628050.1,SO:0001217,UniParc:UPI0000054996,UniRef:UniRef100_Q2G2T5,UniRef:UniRef50_Q2G2T5,UniRef:UniRef90_Q2G2T5
contig_1	Infernal	regulatory_region	15975	16073	9.9e-14	+	.	ID=KMHODOBJJH_179;Name=SAM riboswitch aptamer (S box leader);product=SAM riboswitch aptamer (S box leader);Dbxref=RFAM:RF00162;inference=profile:Rfam:RF00162;Note=SO:0000140;regulatory_class=attenuator
contig_1	Pyrodigal	gene	16133	17101	.	+	.	ID=GCA000560365_00012_gene;locus_tag=GCA000560365_00012;gene=mET2
contig_1	Pyrodigal	CDS	16133	17101	.	+	0	ID=GCA000560365_00012;Name=Alpha/beta fold hydrolase;locus_tag=GCA000560365_00012;product=Alpha/beta fold hydrolase;gene=mET2;Parent=GCA000560365_00012_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2021,COG:E,RefSeq:WP_000186481.1,SO:0001217,UniParc:UPI0000696B61,UniRef:UniRef100_Q2G2T4,UniRef:UniRef50_A0A0Z4IRW6,UniRef:UniRef90_A0A0Z4IRW6
contig_1	Pyrodigal	gene	17407	18330	.	+	.	ID=GCA000560365_00013_gene;locus_tag=GCA000560365_00013;gene=yybS
contig_1	Pyrodigal	CDS	17407	18330	.	+	0	ID=GCA000560365_00013;Name=DUF2232 domain-containing protein;locus_tag=GCA000560365_00013;product=DUF2232 domain-containing protein;gene=yybS;Parent=GCA000560365_00013_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4241,COG:S,RefSeq:WP_000491722.1,SO:0001217,UniParc:UPI00004B5A70,UniRef:UniRef100_A0A0H2WXE2,UniRef:UniRef50_Q2G2T2,UniRef:UniRef90_Q2G2T2
contig_1	Pyrodigal	gene	18345	20312	.	+	.	ID=GCA000560365_00014_gene;locus_tag=GCA000560365_00014;gene=gdpP
contig_1	Pyrodigal	CDS	18345	20312	.	+	0	ID=GCA000560365_00014;Name=cyclic-di-AMP phosphodiesterase GdpP;locus_tag=GCA000560365_00014;product=cyclic-di-AMP phosphodiesterase GdpP;gene=gdpP;Parent=GCA000560365_00014_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001081643,BlastRules:WP_003242517,COG:COG3887,COG:T,KEGG:K22927,RefSeq:WP_001081634.1,SO:0001217,UniParc:UPI00004B5A71,UniRef:UniRef100_Q2G2T6,UniRef:UniRef50_A0A389PUT3,UniRef:UniRef90_A0A389PUT3;ec_number=3.1.4.59
contig_1	Pyrodigal	gene	20309	20755	.	+	.	ID=GCA000560365_00015_gene;locus_tag=GCA000560365_00015;gene=rplI
contig_1	Pyrodigal	CDS	20309	20755	.	+	0	ID=GCA000560365_00015;Name=50S ribosomal protein L9;locus_tag=GCA000560365_00015;product=50S ribosomal protein L9;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:1990904;gene=rplI;Parent=GCA000560365_00015_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0359,COG:J,RefSeq:WP_000864305.1,SO:0001217,UniParc:UPI0000134207,UniRef:UniRef100_Q2FKP1,UniRef:UniRef50_B9DPY3,UniRef:UniRef90_Q2FKP1
contig_1	Pyrodigal	gene	20787	22187	.	+	.	ID=GCA000560365_00016_gene;locus_tag=GCA000560365_00016;gene=dnaB
contig_1	Pyrodigal	CDS	20787	22187	.	+	0	ID=GCA000560365_00016;Name=replicative DNA helicase;locus_tag=GCA000560365_00016;product=replicative DNA helicase;Dbxref=GO:0003677,GO:0003678,GO:0005524,GO:0006260;gene=dnaB;Parent=GCA000560365_00016_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0305,COG:L,KEGG:K02314,RefSeq:WP_000375647.1,SO:0001217,UniParc:UPI00000D7863,UniRef:UniRef100_A0A7Z7QW95,UniRef:UniRef50_A0A5R9B465,UniRef:UniRef90_A0A5R9B465;ec_number=5.6.2.3
contig_1	Pyrodigal	gene	22465	23748	.	+	.	ID=GCA000560365_00017_gene;locus_tag=GCA000560365_00017;gene=purA
contig_1	Pyrodigal	CDS	22465	23748	.	+	0	ID=GCA000560365_00017;Name=adenylosuccinate synthase;locus_tag=GCA000560365_00017;product=adenylosuccinate synthase;Dbxref=GO:0000287,GO:0004019,GO:0005525,GO:0005737,GO:0006164,GO:0044208,GO:0046040;gene=purA;Parent=GCA000560365_00017_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0104,COG:F,KEGG:K01939,RefSeq:WP_000095327.1,SO:0001217,UniParc:UPI000005499C,UniRef:UniRef100_Q5HJX8,UniRef:UniRef50_Q03ET4,UniRef:UniRef90_Q5HK16;ec_number=6.3.4.4
contig_1	tRNAscan-SE	gene	24178	24252	.	+	.	ID=GCA000560365_00018_gene;locus_tag=GCA000560365_00018;gene=trnE
contig_1	tRNAscan-SE	tRNA	24178	24252	.	+	.	ID=GCA000560365_00018;Name=tRNA-Glu(ttc);locus_tag=GCA000560365_00018;product=tRNA-Glu(ttc);gene=trnE;anti_codon=ttc;amino_acid=Glu;Parent=GCA000560365_00018_gene;inference=profile:tRNAscan:2.0;Note=SO:0000259
contig_1	tRNAscan-SE	gene	24260	24332	.	+	.	ID=GCA000560365_00019_gene;locus_tag=GCA000560365_00019;gene=trnD
contig_1	tRNAscan-SE	tRNA	24260	24332	.	+	.	ID=GCA000560365_00019;Name=tRNA-Asp(gtc);locus_tag=GCA000560365_00019;product=tRNA-Asp(gtc);gene=trnD;anti_codon=gtc;amino_acid=Asp;Parent=GCA000560365_00019_gene;inference=profile:tRNAscan:2.0;Note=SO:0000256
contig_1	Pyrodigal	gene	24952	25653	.	+	.	ID=GCA000560365_00020_gene;locus_tag=GCA000560365_00020;gene=yycF
contig_1	Pyrodigal	CDS	24952	25653	.	+	0	ID=GCA000560365_00020;Name=response regulator YycF;locus_tag=GCA000560365_00020;product=response regulator YycF;Dbxref=GO:0000156,GO:0000976,GO:0005829,GO:0006355,GO:0032993;gene=yycF;Parent=GCA000560365_00020_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0745,COG:TK,RefSeq:WP_000101976.1,SO:0001217,UniParc:UPI00000D7820,UniRef:UniRef100_Q2G2U6,UniRef:UniRef50_P37478,UniRef:UniRef90_Q2G2U6
contig_1	Pyrodigal	gene	25666	27492	.	+	.	ID=GCA000560365_00021_gene;locus_tag=GCA000560365_00021;gene=walK
contig_1	Pyrodigal	CDS	25666	27492	.	+	0	ID=GCA000560365_00021;Name=cell wall metabolism sensor histidine kinase WalK;locus_tag=GCA000560365_00021;product=cell wall metabolism sensor histidine kinase WalK;Dbxref=GO:0000155,GO:0000156,GO:0005524,GO:0005886,GO:0006355,GO:0007165,GO:0007234,GO:0016020,GO:0016310,GO:0030295;gene=walK;Parent=GCA000560365_00021_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5002,COG:T,RefSeq:WP_000871607.1,SO:0001217,UniParc:UPI000005499E,UniRef:UniRef100_Q2G2U4,UniRef:UniRef50_Q2G2U4,UniRef:UniRef90_Q2G2U4;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	27485	28819	.	+	.	ID=GCA000560365_00022_gene;locus_tag=GCA000560365_00022;gene=yycH
contig_1	Pyrodigal	CDS	27485	28819	.	+	0	ID=GCA000560365_00022;Name=Regulatory protein YycH domain-containing protein;locus_tag=GCA000560365_00022;product=Regulatory protein YycH domain-containing protein;gene=yycH;Parent=GCA000560365_00022_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001060131.1,SO:0001217,UniParc:UPI00004B5A73,UniRef:UniRef100_Q2G2U3,UniRef:UniRef90_A0A6B1RUA2
contig_1	Pyrodigal	gene	28820	29608	.	+	.	ID=GCA000560365_00023_gene;locus_tag=GCA000560365_00023;gene=yycI
contig_1	Pyrodigal	CDS	28820	29608	.	+	0	ID=GCA000560365_00023;Name=Regulatory protein YycH-like domain-containing protein;locus_tag=GCA000560365_00023;product=Regulatory protein YycH-like domain-containing protein;gene=yycI;Parent=GCA000560365_00023_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4853,COG:T,RefSeq:WP_001104172.1,SO:0001217,UniParc:UPI00000549A0,UniRef:UniRef100_Q2G2U2,UniRef:UniRef50_Q2G2U2,UniRef:UniRef90_Q2G2U2
contig_1	Pyrodigal	gene	29998	30798	.	+	.	ID=GCA000560365_00024_gene;locus_tag=GCA000560365_00024
contig_1	Pyrodigal	CDS	29998	30798	.	+	0	ID=GCA000560365_00024;Name=Metallo-beta-lactamase domain-containing protein;locus_tag=GCA000560365_00024;product=Metallo-beta-lactamase domain-containing protein;Parent=GCA000560365_00024_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000088648.1,SO:0001217,UniParc:UPI00000549A1,UniRef:UniRef100_Q2G2U5,UniRef:UniRef90_Q2G2U5
contig_1	Pyrodigal	gene	31026	33344	.	+	.	ID=GCA000560365_00025_gene;locus_tag=GCA000560365_00025;gene=adsA
contig_1	Pyrodigal	CDS	31026	33344	.	+	0	ID=GCA000560365_00025;Name=LPXTG-anchored adenosine synthase AdsA;locus_tag=GCA000560365_00025;product=LPXTG-anchored adenosine synthase AdsA;gene=adsA;Parent=GCA000560365_00025_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000645780,COG:COG0737,COG:FV,RefSeq:WP_000645780.1,SO:0001217,UniParc:UPI000005230E,UniRef:UniRef100_Q2G253,UniRef:UniRef50_A0AAE8TKC7,UniRef:UniRef90_A0AAE8TKC7
contig_1	Pyrodigal	gene	33712	34191	.	+	.	ID=GCA000560365_00026_gene;locus_tag=GCA000560365_00026;gene=rlmH
contig_1	Pyrodigal	CDS	33712	34191	.	+	0	ID=GCA000560365_00026;Name=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;locus_tag=GCA000560365_00026;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;Dbxref=GO:0005737,GO:0006364,GO:0008168,GO:0070038;gene=rlmH;Parent=GCA000560365_00026_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1576,COG:J,KEGG:K00783,RefSeq:WP_000704775.1,SO:0001217,UniParc:UPI0000006C89,UniRef:UniRef100_Q2G252,UniRef:UniRef50_Q45601,UniRef:UniRef90_Q2G252;ec_number=2.1.1.177
contig_1	Pyrodigal	gene	34513	35769	.	+	.	ID=GCA000560365_00027_gene;locus_tag=GCA000560365_00027
contig_1	Pyrodigal	CDS	34513	35769	.	+	0	ID=GCA000560365_00027;Name=Protein NO VEIN%2C C-terminal;locus_tag=GCA000560365_00027;product=Protein NO VEIN%2C C-terminal;Parent=GCA000560365_00027_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000566670.1,SO:0001217,UniParc:UPI00000D9B85,UniRef:UniRef100_Q5HK24,UniRef:UniRef50_I2FI09,UniRef:UniRef90_I2FI09
contig_1	Pyrodigal	gene	35877	36551	.	-	.	ID=GCA000560365_00028_gene;locus_tag=GCA000560365_00028;gene=tnp
contig_1	Pyrodigal	CDS	35877	36551	.	-	0	ID=GCA000560365_00028;Name=IS6 family IS257R1 transposase;locus_tag=GCA000560365_00028;product=IS6 family IS257R1 transposase;Dbxref=GO:0003677,GO:0004803,GO:0006310,GO:0015074,GO:0032196;gene=tnp;Parent=GCA000560365_00028_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3316,COG:X,IS:IS257R1,RefSeq:WP_001105956.1,SO:0001217,UniParc:UPI00015FD75D,UniRef:UniRef100_D2J799,UniRef:UniRef50_P0C1L0,UniRef:UniRef90_P0C1L0
contig_1	Pyrodigal	gene	36809	36976	.	+	.	ID=GCA000560365_00029_gene;locus_tag=GCA000560365_00029;gene=pksG
contig_1	Pyrodigal	CDS	36809	36976	.	+	0	ID=GCA000560365_00029;Name=hydroxymethylglutaryl-CoA synthase;locus_tag=GCA000560365_00029;product=hydroxymethylglutaryl-CoA synthase;Dbxref=GO:0004421;gene=pksG;Parent=GCA000560365_00029_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3425,COG:I,KEGG:K01641,RefSeq:WP_000894158.1,SO:0001217,UniParc:UPI00000D76B1,UniRef:UniRef100_Q5HK27,UniRef:UniRef50_R3WMN8,UniRef:UniRef90_E0D4Z2;ec_number=2.3.3.10
contig_1	Pyrodigal	gene	37813	38556	.	+	.	ID=GCA000560365_00030_gene;locus_tag=GCA000560365_00030;gene=ugpQ
contig_1	Pyrodigal	CDS	37813	38556	.	+	0	ID=GCA000560365_00030;Name=Glycerophosphoryl diester phosphodiesterase;locus_tag=GCA000560365_00030;product=Glycerophosphoryl diester phosphodiesterase;gene=ugpQ;Parent=GCA000560365_00030_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0584,COG:I,RefSeq:WP_000958858.1,SO:0001217,UniParc:UPI0000006C77,UniRef:UniRef100_Q5HK29,UniRef:UniRef50_S2XRR6,UniRef:UniRef90_A0A386R0S6
contig_1	Pyrodigal	gene	38653	39081	.	+	.	ID=GCA000560365_00031_gene;locus_tag=GCA000560365_00031;gene=maoC
contig_1	Pyrodigal	CDS	38653	39081	.	+	0	ID=GCA000560365_00031;Name=Acyl dehydratase;locus_tag=GCA000560365_00031;product=Acyl dehydratase;gene=maoC;Parent=GCA000560365_00031_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2030,COG:I,RefSeq:WP_000872606.1,SO:0001217,UniParc:UPI0000006C78,UniRef:UniRef100_Q5HK30,UniRef:UniRef50_P96670,UniRef:UniRef90_A0AAJ5CUA4
contig_1	Pyrodigal	gene	39127	41133	.	-	.	ID=GCA000560365_00032_gene;locus_tag=GCA000560365_00032;gene=mecA
contig_1	Pyrodigal	CDS	39127	41133	.	-	0	ID=GCA000560365_00032;Name=PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA;locus_tag=GCA000560365_00032;product=PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA;Dbxref=GO:0008658,GO:0046677;gene=mecA;Parent=GCA000560365_00032_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0768,COG:DM,KEGG:K02545,NCBIProtein:WP_000721310.1,RefSeq:WP_000721310.1,SO:0001217,UniParc:UPI00000DA0B7,UniRef:UniRef100_Q5HK31,UniRef:UniRef50_P07944,UniRef:UniRef90_Q93IC2;ec_number=3.4.16.4
contig_1	Pyrodigal	gene	41233	42219	.	+	.	ID=GCA000560365_00033_gene;locus_tag=GCA000560365_00033;gene=mecR1
contig_1	Pyrodigal	CDS	41233	42219	.	+	0	ID=GCA000560365_00033;Name=beta-lactam sensor/signal transducer MecR1;locus_tag=GCA000560365_00033;product=beta-lactam sensor/signal transducer MecR1;gene=mecR1;Parent=GCA000560365_00033_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=NCBIProtein:WP_000952923.1,RefSeq:WP_001549960.1,SO:0001217,UniParc:UPI00000D7692,UniRef:UniRef100_D9Z681,UniRef:UniRef50_D9Z681,UniRef:UniRef90_D9Z681
contig_1	Pyrodigal	gene	42191	42451	.	+	.	ID=GCA000560365_00034_gene;locus_tag=GCA000560365_00034
contig_1	Pyrodigal	CDS	42191	42451	.	+	0	ID=GCA000560365_00034;Name=Type I restriction-modification system%2C restriction subunit R;locus_tag=GCA000560365_00034;product=Type I restriction-modification system%2C restriction subunit R;Parent=GCA000560365_00034_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001549961.1,SO:0001217,UniParc:UPI00004B5A75,UniRef:UniRef100_A0A1W5ZMK8,UniRef:UniRef50_A0A1W5ZMK8,UniRef:UniRef90_A0A1W5ZMK8
contig_1	Pyrodigal	gene	42442	43965	.	-	.	ID=GCA000560365_00035_gene;locus_tag=GCA000560365_00035;gene=tnp
contig_1	Pyrodigal	CDS	42442	43965	.	-	0	ID=GCA000560365_00035;Name=IS1182 family transposase;locus_tag=GCA000560365_00035;product=IS1182 family transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000560365_00035_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3666,COG:X,KEGG:K07487,SO:0001217,UniParc:UPI00000D7792,UniRef:UniRef100_Q3YK41,UniRef:UniRef50_A0A9P2Z0V2,UniRef:UniRef90_Q3YK41
contig_1	Pyrodigal	gene	44101	44607	.	-	.	ID=GCA000560365_00036_gene;locus_tag=GCA000560365_00036
contig_1	Pyrodigal	CDS	44101	44607	.	-	0	ID=GCA000560365_00036;Name=Ribosomal RNA large subunit methyltransferase e;locus_tag=GCA000560365_00036;product=Ribosomal RNA large subunit methyltransferase e;Parent=GCA000560365_00036_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4333,COG:S,RefSeq:WP_031808128.1,SO:0001217,UniParc:UPI00044C9331,UniRef:UniRef100_UPI00044C9331,UniRef:UniRef50_A0A6B9V013,UniRef:UniRef90_M1XJN4
contig_1	Pyrodigal	gene	44622	44933	.	-	.	ID=GCA000560365_00037_gene;locus_tag=GCA000560365_00037
contig_1	Pyrodigal	CDS	44622	44933	.	-	0	ID=GCA000560365_00037;Name=Pyridoxal phosphate-dependent enzyme;locus_tag=GCA000560365_00037;product=Pyridoxal phosphate-dependent enzyme;Parent=GCA000560365_00037_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000700851.1,SO:0001217,UniParc:UPI00000D76ED,UniRef:UniRef100_A0A060PLE8,UniRef:UniRef50_A0A0H2VE41,UniRef:UniRef90_A0A060PLE8
contig_1	Pyrodigal	gene	44935	45027	.	-	.	ID=GCA000560365_00038_gene;locus_tag=GCA000560365_00038
contig_1	Pyrodigal	CDS	44935	45027	.	-	0	ID=GCA000560365_00038;Name=Phage protein;locus_tag=GCA000560365_00038;product=Phage protein;Parent=GCA000560365_00038_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00015FD6DD,UniRef:UniRef100_U5NZD5,UniRef:UniRef50_X5IHY2,UniRef:UniRef90_U5NZD5
contig_1	Pyrodigal	gene	45020	45370	.	-	.	ID=GCA000560365_00039_gene;locus_tag=GCA000560365_00039
contig_1	Pyrodigal	CDS	45020	45370	.	-	0	ID=GCA000560365_00039;Name=hypothetical protein;locus_tag=GCA000560365_00039;product=hypothetical protein;Parent=GCA000560365_00039_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000849672.1,SO:0001217,UniParc:UPI00000D779F,UniRef:UniRef100_A0A060PNX9,UniRef:UniRef50_A0A0H2VDZ4,UniRef:UniRef90_A0A0H2VE21,PFAM:PF06106.16
contig_1	Pyrodigal	gene	45892	47520	.	-	.	ID=GCA000560365_00040_gene;locus_tag=GCA000560365_00040;gene=ccrB
contig_1	Pyrodigal	CDS	45892	47520	.	-	0	ID=GCA000560365_00040;Name=cassette chromosome recombinase CcrB;locus_tag=GCA000560365_00040;product=cassette chromosome recombinase CcrB;Dbxref=GO:0006310,GO:0009009;gene=ccrB;Parent=GCA000560365_00040_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1961,COG:L,KEGG:K06400,RefSeq:WP_001186608.1,SO:0001217,UniParc:UPI00001833ED,UniRef:UniRef100_Q83ZD2,UniRef:UniRef50_M1XHI0,UniRef:UniRef90_M1XHI0
contig_1	Pyrodigal	gene	47542	48891	.	-	.	ID=GCA000560365_00041_gene;locus_tag=GCA000560365_00041;gene=ccrA
contig_1	Pyrodigal	CDS	47542	48891	.	-	0	ID=GCA000560365_00041;Name=cassette chromosome recombinase CcrA;locus_tag=GCA000560365_00041;product=cassette chromosome recombinase CcrA;Dbxref=GO:0006310,GO:0009009;gene=ccrA;Parent=GCA000560365_00041_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1961,COG:L,KEGG:K06400,RefSeq:WP_000815640.1,SO:0001217,UniParc:UPI00001833EC,UniRef:UniRef100_G5EL93,UniRef:UniRef50_A0A1S2MMY8,UniRef:UniRef90_A5YT64
contig_1	Pyrodigal	gene	49125	50912	.	-	.	ID=GCA000560365_00042_gene;locus_tag=GCA000560365_00042;gene=cch1
contig_1	Pyrodigal	CDS	49125	50912	.	-	0	ID=GCA000560365_00042;Name=cassette chromosome replicative helicase;locus_tag=GCA000560365_00042;product=cassette chromosome replicative helicase;Dbxref=GO:0043138;gene=cch1;Parent=GCA000560365_00042_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000122620.1,SO:0001217,UniParc:UPI00000D9B8A,UniRef:UniRef100_M1XH74,UniRef:UniRef50_A0A0H2VE26,UniRef:UniRef90_A0A221KKM5
contig_1	Pyrodigal	gene	50912	51202	.	-	.	ID=GCA000560365_00043_gene;locus_tag=GCA000560365_00043;gene=ssb
contig_1	Pyrodigal	CDS	50912	51202	.	-	0	ID=GCA000560365_00043;Name=cassette chromosome ssDNA-binding protein;locus_tag=GCA000560365_00043;product=cassette chromosome ssDNA-binding protein;gene=ssb;Parent=GCA000560365_00043_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001036438.1,SO:0001217,UniParc:UPI00000D9B8B,UniRef:UniRef100_D9Z688,UniRef:UniRef50_A0A1B1UYE3,UniRef:UniRef90_D9Z688
contig_1	Pyrodigal	gene	51341	52390	.	+	.	ID=GCA000560365_00044_gene;locus_tag=GCA000560365_00044
contig_1	Pyrodigal	CDS	51341	52390	.	+	0	ID=GCA000560365_00044;Name=ACP synthase;locus_tag=GCA000560365_00044;product=ACP synthase;Parent=GCA000560365_00044_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000613248.1,SO:0001217,UniParc:UPI00000D77AC,UniRef:UniRef100_A0A168PIJ2,UniRef:UniRef50_G5JK78,UniRef:UniRef90_A0A168PIJ2
contig_1	Pyrodigal	gene	53063	54553	.	+	.	ID=GCA000560365_00045_gene;locus_tag=GCA000560365_00045
contig_1	Pyrodigal	CDS	53063	54553	.	+	0	ID=GCA000560365_00045;Name=Transcriptional regulator;locus_tag=GCA000560365_00045;product=Transcriptional regulator;Parent=GCA000560365_00045_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000554504.1,SO:0001217,UniParc:UPI00000D7890,UniRef:UniRef100_D9Z690,UniRef:UniRef50_G5JK79,UniRef:UniRef90_D9Z690
contig_1	Pyrodigal	gene	55177	56181	.	-	.	ID=GCA000560365_00046_gene;locus_tag=GCA000560365_00046
contig_1	Pyrodigal	CDS	55177	56181	.	-	0	ID=GCA000560365_00046;Name=Rhodanese domain-containing protein;locus_tag=GCA000560365_00046;product=Rhodanese domain-containing protein;Parent=GCA000560365_00046_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D7868,UniRef:UniRef100_A0A1W5ZMM1,UniRef:UniRef50_D9Z6D1,UniRef:UniRef90_D9Z6D1
contig_1	Pyrodigal	gene	56434	56805	.	+	.	ID=GCA000560365_00047_gene;locus_tag=GCA000560365_00047
contig_1	Pyrodigal	CDS	56434	56805	.	+	0	ID=GCA000560365_00047;Name=5-methylcytosine-specific restriction enzyme a;locus_tag=GCA000560365_00047;product=5-methylcytosine-specific restriction enzyme a;Parent=GCA000560365_00047_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001549968.1,SO:0001217,UniParc:UPI00000D9B8D,UniRef:UniRef100_A0A1W5ZMN8,UniRef:UniRef50_M1XJK9,UniRef:UniRef90_M1XJK9
contig_1	Pyrodigal	gene	56934	57554	.	+	.	ID=GCA000560365_00048_gene;locus_tag=GCA000560365_00048
contig_1	Pyrodigal	CDS	56934	57554	.	+	0	ID=GCA000560365_00048;Name=Restriction endonuclease;locus_tag=GCA000560365_00048;product=Restriction endonuclease;Parent=GCA000560365_00048_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000673114.1,SO:0001217,UniParc:UPI00000D773F,UniRef:UniRef100_A0A1W5ZMN6,UniRef:UniRef50_A0AAI8DKK5,UniRef:UniRef90_A0AAI8DKK5
contig_1	Pyrodigal	gene	58471	58641	.	-	.	ID=GCA000560365_00049_gene;locus_tag=GCA000560365_00049
contig_1	Pyrodigal	CDS	58471	58641	.	-	0	ID=GCA000560365_00049;Name=Phage protein;locus_tag=GCA000560365_00049;product=Phage protein;Parent=GCA000560365_00049_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001141152.1,SO:0001217,UniParc:UPI00015FD6DF,UniRef:UniRef100_U5NZA1,UniRef:UniRef50_U5NZA1,UniRef:UniRef90_U5NZA1
contig_1	Pyrodigal	gene	59043	60008	.	+	.	ID=GCA000560365_00050_gene;locus_tag=GCA000560365_00050
contig_1	Pyrodigal	CDS	59043	60008	.	+	0	ID=GCA000560365_00050;Name=HNH nuclease domain-containing protein;locus_tag=GCA000560365_00050;product=HNH nuclease domain-containing protein;Parent=GCA000560365_00050_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07454,RefSeq:WP_000027972.1,SO:0001217,UniParc:UPI0000696B68,UniRef:UniRef100_A0A161JQX5,UniRef:UniRef50_A0A161JQX5,UniRef:UniRef90_A0A161JQX5
contig_1	Pyrodigal	gene	60388	60717	.	+	.	ID=GCA000560365_00051_gene;locus_tag=GCA000560365_00051
contig_1	Pyrodigal	CDS	60388	60717	.	+	0	ID=GCA000560365_00051;Name=hypothetical protein;locus_tag=GCA000560365_00051;product=hypothetical protein;Parent=GCA000560365_00051_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000124775.1,SO:0001217,UniParc:UPI0000696B6A,UniRef:UniRef100_A0A169SZA9,UniRef:UniRef50_A0A169SZA9,UniRef:UniRef90_A0A169SZA9
contig_1	Pyrodigal	gene	60794	61153	.	-	.	ID=GCA000560365_00052_gene;locus_tag=GCA000560365_00052
contig_1	Pyrodigal	CDS	60794	61153	.	-	0	ID=GCA000560365_00052;Name=DUF4870 domain-containing protein;locus_tag=GCA000560365_00052;product=DUF4870 domain-containing protein;Parent=GCA000560365_00052_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000432278.1,SO:0001217,UniParc:UPI0001EFF132,UniRef:UniRef100_A0A169SZC0,UniRef:UniRef50_A0A0H2XEJ2,UniRef:UniRef90_A0A0H2XEJ2
contig_1	Pyrodigal	gene	61724	62533	.	-	.	ID=GCA000560365_00053_gene;locus_tag=GCA000560365_00053
contig_1	Pyrodigal	CDS	61724	62533	.	-	0	ID=GCA000560365_00053;Name=IS3 family transposase;locus_tag=GCA000560365_00053;product=IS3 family transposase;Dbxref=GO:0004803;Parent=GCA000560365_00053_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00015FD6E2,UniRef:UniRef100_A0A844RG85,UniRef:UniRef50_Q0GQB4,UniRef:UniRef90_A0A2R3SYR0
contig_1	Infernal	gene	61781	61878	.	+	.	ID=GCA000560365_00054_gene;locus_tag=GCA000560365_00054;gene=rli23
contig_1	Infernal	ncRNA	61781	61878	3.3e-16	+	.	ID=GCA000560365_00054;Name=Listeria snRNA rli23;locus_tag=GCA000560365_00054;product=Listeria snRNA rli23;Dbxref=RFAM:RF01458;Parent=GCA000560365_00054_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01458
contig_1	Pyrodigal	gene	63046	63543	.	-	.	ID=GCA000560365_00055_gene;locus_tag=GCA000560365_00055;gene=rimL
contig_1	Pyrodigal	CDS	63046	63543	.	-	0	ID=GCA000560365_00055;Name=GNAT family N-acetyltransferase;locus_tag=GCA000560365_00055;product=GNAT family N-acetyltransferase;gene=rimL;Parent=GCA000560365_00055_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1670,COG:JO,RefSeq:WP_000776433.1,SO:0001217,UniParc:UPI00000E4C62,UniRef:UniRef100_A0A169SZH3,UniRef:UniRef50_A0A0D0SMX0,UniRef:UniRef90_A0A418J858
contig_1	Pyrodigal	gene	64041	65168	.	+	.	ID=GCA000560365_00056_gene;locus_tag=GCA000560365_00056
contig_1	Pyrodigal	CDS	64041	65168	.	+	0	ID=GCA000560365_00056;Name=Alcohol dehydrogenase;locus_tag=GCA000560365_00056;product=Alcohol dehydrogenase;Parent=GCA000560365_00056_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_031808129.1,SO:0001217,UniParc:UPI00044DB804,UniRef:UniRef100_UPI00044DB804,UniRef:UniRef50_G9QHN4,UniRef:UniRef90_A0A6B9V093
contig_1	Infernal	regulatory_region	65199	65300	2.4e-06	-	.	ID=KMHODOBJJH_191;Name=azaaromatic riboswitch aptamer (yjdF RNA);product=azaaromatic riboswitch aptamer (yjdF RNA);Dbxref=RFAM:RF01764;inference=profile:Rfam:RF01764;Note=SO:0000035;regulatory_class=riboswitch
contig_1	Pyrodigal	gene	65423	65647	.	-	.	ID=GCA000560365_00057_gene;locus_tag=GCA000560365_00057
contig_1	Pyrodigal	CDS	65423	65647	.	-	0	ID=GCA000560365_00057;Name=Transcriptional regulator;locus_tag=GCA000560365_00057;product=Transcriptional regulator;Parent=GCA000560365_00057_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001015130.1,SO:0001217,UniParc:UPI00015FD6E3,UniRef:UniRef100_A0A161JQX9,UniRef:UniRef50_A0A6N0I2N9,UniRef:UniRef90_A0A161JQX9
contig_1	Pyrodigal	gene	65661	66164	.	-	.	ID=GCA000560365_00058_gene;locus_tag=GCA000560365_00058
contig_1	Pyrodigal	CDS	65661	66164	.	-	0	ID=GCA000560365_00058;Name=Ribosomal RNA large subunit methyltransferase e;locus_tag=GCA000560365_00058;product=Ribosomal RNA large subunit methyltransferase e;Parent=GCA000560365_00058_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4333,COG:S,RefSeq:WP_001092187.1,SO:0001217,UniParc:UPI0000696B6F,UniRef:UniRef100_A0A161JQQ7,UniRef:UniRef50_A0A6B9V013,UniRef:UniRef90_M1XJN4
contig_1	Pyrodigal	gene	66180	66491	.	-	.	ID=GCA000560365_00059_gene;locus_tag=GCA000560365_00059
contig_1	Pyrodigal	CDS	66180	66491	.	-	0	ID=GCA000560365_00059;Name=Pyridoxal phosphate-dependent enzyme;locus_tag=GCA000560365_00059;product=Pyridoxal phosphate-dependent enzyme;Parent=GCA000560365_00059_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000700852.1,SO:0001217,UniParc:UPI0000696B70,UniRef:UniRef100_U5NZ17,UniRef:UniRef50_A0A0H2VE41,UniRef:UniRef90_A0A221KKM4
contig_1	Pyrodigal	gene	66493	66585	.	-	.	ID=GCA000560365_00060_gene;locus_tag=GCA000560365_00060
contig_1	Pyrodigal	CDS	66493	66585	.	-	0	ID=GCA000560365_00060;Name=hypothetical protein;locus_tag=GCA000560365_00060;product=hypothetical protein;Parent=GCA000560365_00060_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000E5500,UniRef:UniRef100_U5NZF6,UniRef:UniRef50_Q5HK49,UniRef:UniRef90_U5NZF6
contig_1	Pyrodigal	gene	66578	66928	.	-	.	ID=GCA000560365_00061_gene;locus_tag=GCA000560365_00061
contig_1	Pyrodigal	CDS	66578	66928	.	-	0	ID=GCA000560365_00061;Name=hypothetical protein;locus_tag=GCA000560365_00061;product=hypothetical protein;Parent=GCA000560365_00061_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000859159.1,SO:0001217,UniParc:UPI0000696B71,UniRef:UniRef100_A0A169SZN4,UniRef:UniRef50_A0A0H2VDZ4,UniRef:UniRef90_A0A7Z1SB89,PFAM:PF06106.16
contig_1	Pyrodigal	gene	67885	68739	.	+	.	ID=GCA000560365_00062_gene;locus_tag=GCA000560365_00062;gene=tnp
contig_1	Pyrodigal	CDS	67885	68739	.	+	0	ID=GCA000560365_00062;Name=IS3 family transposase ORF B;locus_tag=GCA000560365_00062;product=IS3 family transposase ORF B;Dbxref=GO:0004803;gene=tnp;Parent=GCA000560365_00062_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_R2RXM0,UniRef:UniRef90_Q3YK49
contig_1	Infernal	gene	68531	68628	.	-	.	ID=GCA000560365_00063_gene;locus_tag=GCA000560365_00063;gene=rli23
contig_1	Infernal	ncRNA	68531	68628	1.3e-16	-	.	ID=GCA000560365_00063;Name=Listeria snRNA rli23;locus_tag=GCA000560365_00063;product=Listeria snRNA rli23;Dbxref=RFAM:RF01458;Parent=GCA000560365_00063_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01458
contig_1	Pyrodigal	gene	68839	69768	.	-	.	ID=GCA000560365_00064_gene;locus_tag=GCA000560365_00064;gene=arcC
contig_1	Pyrodigal	CDS	68839	69768	.	-	0	ID=GCA000560365_00064;Name=carbamate kinase;locus_tag=GCA000560365_00064;product=carbamate kinase;Dbxref=GO:0005524,GO:0005829,GO:0006520,GO:0008804,GO:0019546;gene=arcC;Parent=GCA000560365_00064_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0549,COG:E,RefSeq:WP_000036757.1,SO:0001217,UniParc:UPI0000696B73,UniRef:UniRef100_Q2FKJ8,UniRef:UniRef50_Q4L9V7,UniRef:UniRef90_Q8CU42;ec_number=2.7.2.2
contig_1	Pyrodigal	gene	69788	70786	.	-	.	ID=GCA000560365_00065_gene;locus_tag=GCA000560365_00065;gene=argF
contig_1	Pyrodigal	CDS	69788	70786	.	-	0	ID=GCA000560365_00065;Name=ornithine carbamoyltransferase;locus_tag=GCA000560365_00065;product=ornithine carbamoyltransferase;Dbxref=GO:0004585,GO:0005737,GO:0006526,GO:0016597,GO:0019240,GO:0042450;gene=argF;Parent=GCA000560365_00065_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0078,COG:E,RefSeq:WP_000793596.1,SO:0001217,UniParc:UPI00000E4C89,UniRef:UniRef100_Q8CU41,UniRef:UniRef50_P08308,UniRef:UniRef90_Q8CU41;ec_number=2.1.3.3
contig_1	Pyrodigal	gene	70824	71513	.	-	.	ID=GCA000560365_00066_gene;locus_tag=GCA000560365_00066;gene=arcR
contig_1	Pyrodigal	CDS	70824	71513	.	-	0	ID=GCA000560365_00066;Name=HTH-type transcriptional regulator ArcR;locus_tag=GCA000560365_00066;product=HTH-type transcriptional regulator ArcR;gene=arcR;Parent=GCA000560365_00066_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0664,COG:T,KEGG:K21828,RefSeq:WP_000272781.1,SO:0001217,UniParc:UPI000003B4ED,UniRef:UniRef100_E9KNS2,UniRef:UniRef50_A0A380FVB6,UniRef:UniRef90_A0A4U9TT91
contig_1	Pyrodigal	gene	71555	72976	.	-	.	ID=GCA000560365_00067_gene;locus_tag=GCA000560365_00067;gene=arcD
contig_1	Pyrodigal	CDS	71555	72976	.	-	0	ID=GCA000560365_00067;Name=arginine-ornithine antiporter;locus_tag=GCA000560365_00067;product=arginine-ornithine antiporter;Dbxref=GO:0005886,GO:0006527,GO:0043858,GO:1903826;gene=arcD;Parent=GCA000560365_00067_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0531,COG:E,RefSeq:WP_000344142.1,SO:0001217,UniParc:UPI000003B4EC,UniRef:UniRef100_A0A918RMY5,UniRef:UniRef50_J9W5S1,UniRef:UniRef90_A0A0D6XQA8
contig_1	Pyrodigal	gene	73062	74297	.	-	.	ID=GCA000560365_00068_gene;locus_tag=GCA000560365_00068;gene=arcA
contig_1	Pyrodigal	CDS	73062	74297	.	-	0	ID=GCA000560365_00068;Name=arginine deiminase;locus_tag=GCA000560365_00068;product=arginine deiminase;Dbxref=GO:0005737,GO:0016990,GO:0019546,GO:0019547;gene=arcA;Parent=GCA000560365_00068_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2235,COG:E,RefSeq:WP_000249804.1,SO:0001217,UniParc:UPI0000696B74,UniRef:UniRef100_E9KNS4,UniRef:UniRef50_O86131,UniRef:UniRef90_Q8CQG5;ec_number=3.5.3.6
contig_1	Pyrodigal	gene	74566	75012	.	-	.	ID=GCA000560365_00069_gene;locus_tag=GCA000560365_00069;gene=argR
contig_1	Pyrodigal	CDS	74566	75012	.	-	0	ID=GCA000560365_00069;Name=Arginine repressor;locus_tag=GCA000560365_00069;product=Arginine repressor;gene=argR;Parent=GCA000560365_00069_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1438,COG:K,KEGG:K03402,RefSeq:WP_000711814.1,SO:0001217,UniParc:UPI0000696B75,UniRef:UniRef100_U5NW14,UniRef:UniRef50_A0A0D6XNL2,UniRef:UniRef90_U5NW14
contig_1	Pyrodigal	gene	75514	75945	.	+	.	ID=GCA000560365_00070_gene;locus_tag=GCA000560365_00070;gene=uspA
contig_1	Pyrodigal	CDS	75514	75945	.	+	0	ID=GCA000560365_00070;Name=UspA domain-containing protein;locus_tag=GCA000560365_00070;product=UspA domain-containing protein;gene=uspA;Parent=GCA000560365_00070_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0589,COG:T,RefSeq:WP_000475805.1,SO:0001217,UniParc:UPI000003B4E9,UniRef:UniRef100_U6C408,UniRef:UniRef50_U6C408,UniRef:UniRef90_U6C408
contig_1	Pyrodigal	gene	76218	76463	.	+	.	ID=GCA000560365_00071_gene;locus_tag=GCA000560365_00071
contig_1	Pyrodigal	CDS	76218	76463	.	+	0	ID=GCA000560365_00071;Name=IS6 family transposase;locus_tag=GCA000560365_00071;product=IS6 family transposase;Parent=GCA000560365_00071_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A133S0U9,UniRef:UniRef90_A0A133S0U9
contig_1	Pyrodigal	gene	77078	77893	.	+	.	ID=GCA000560365_00072_gene;locus_tag=GCA000560365_00072
contig_1	Pyrodigal	CDS	77078	77893	.	+	0	ID=GCA000560365_00072;Name=Lysophospholipase;locus_tag=GCA000560365_00072;product=Lysophospholipase;Parent=GCA000560365_00072_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000558975.1,SO:0001217,UniParc:UPI000003B9D2,UniRef:UniRef100_A0A3G1RLK6,UniRef:UniRef50_A0A0D0SKE5,UniRef:UniRef90_A0A3G1RLU2
contig_1	Pyrodigal	gene	78320	79393	.	+	.	ID=GCA000560365_00073_gene;locus_tag=GCA000560365_00073;gene=tnp
contig_1	Pyrodigal	CDS	78320	79393	.	+	0	ID=GCA000560365_00073;Name=IS110 family ISSep2 transposase;locus_tag=GCA000560365_00073;product=IS110 family ISSep2 transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000560365_00073_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3547,COG:X,IS:ISSep2,SO:0001217,UniParc:UPI00024E49A6,UniRef:UniRef100_A0A221KKV0,UniRef:UniRef50_U6C1M0,UniRef:UniRef90_U6C1M0
contig_1	Pyrodigal	gene	79653	80345	.	+	.	ID=GCA000560365_00074_gene;locus_tag=GCA000560365_00074;gene=ubiE
contig_1	Pyrodigal	CDS	79653	80345	.	+	0	ID=GCA000560365_00074;Name=Class I SAM-dependent methyltransferase;locus_tag=GCA000560365_00074;product=Class I SAM-dependent methyltransferase;gene=ubiE;Parent=GCA000560365_00074_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2226,COG:HJ,RefSeq:WP_000169584.1,SO:0001217,UniParc:UPI00015FD6E8,UniRef:UniRef100_A0A3G1RMQ0,UniRef:UniRef50_A0A380FWJ4,UniRef:UniRef90_A0AAX0ZEX8
contig_1	Pyrodigal	gene	80342	81895	.	+	.	ID=GCA000560365_00075_gene;locus_tag=GCA000560365_00075
contig_1	Pyrodigal	CDS	80342	81895	.	+	0	ID=GCA000560365_00075;Name=Peptide ABC transporter peptide-binding protein;locus_tag=GCA000560365_00075;product=Peptide ABC transporter peptide-binding protein;Parent=GCA000560365_00075_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001224176.1,SO:0001217,UniParc:UPI0000696B78,UniRef:UniRef100_U6C3J8,UniRef:UniRef50_A0A5B2Z578,UniRef:UniRef90_U6C3J8
contig_1	Pyrodigal	gene	81898	82854	.	+	.	ID=GCA000560365_00076_gene;locus_tag=GCA000560365_00076
contig_1	Pyrodigal	CDS	81898	82854	.	+	0	ID=GCA000560365_00076;Name=Oligopeptide permease%2C channel-forming protein;locus_tag=GCA000560365_00076;product=Oligopeptide permease%2C channel-forming protein;Parent=GCA000560365_00076_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000920052.1,SO:0001217,UniParc:UPI000003B6A9,UniRef:UniRef100_U6C414,UniRef:UniRef50_Q4LA68,UniRef:UniRef90_U6C3L4
contig_1	Pyrodigal	gene	82854	83621	.	+	.	ID=GCA000560365_00077_gene;locus_tag=GCA000560365_00077;gene=dppC
contig_1	Pyrodigal	CDS	82854	83621	.	+	0	ID=GCA000560365_00077;Name=ABC transmembrane type-1 domain-containing protein;locus_tag=GCA000560365_00077;product=ABC transmembrane type-1 domain-containing protein;gene=dppC;Parent=GCA000560365_00077_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1173,COG:EP,RefSeq:WP_000760756.1,SO:0001217,UniParc:UPI0000696B79,UniRef:UniRef100_U6C1K7,UniRef:UniRef50_A0A853V2J3,UniRef:UniRef90_A0A2K0AXZ2
contig_1	Pyrodigal	gene	83588	84355	.	+	.	ID=GCA000560365_00078_gene;locus_tag=GCA000560365_00078
contig_1	Pyrodigal	CDS	83588	84355	.	+	0	ID=GCA000560365_00078;Name=ABC transporter;locus_tag=GCA000560365_00078;product=ABC transporter;Parent=GCA000560365_00078_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000073898.1,SO:0001217,UniParc:UPI0000696B7A,UniRef:UniRef100_A0A3G1RMI9,UniRef:UniRef50_A0A380FWY4,UniRef:UniRef90_A0A3G1RMI9
contig_1	Pyrodigal	gene	84348	84983	.	+	.	ID=GCA000560365_00079_gene;locus_tag=GCA000560365_00079
contig_1	Pyrodigal	CDS	84348	84983	.	+	0	ID=GCA000560365_00079;Name=ABC transporter ATP-binding protein;locus_tag=GCA000560365_00079;product=ABC transporter ATP-binding protein;Parent=GCA000560365_00079_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000912324.1,SO:0001217,UniParc:UPI0000696B7B,UniRef:UniRef100_A0A3G1RMG9,UniRef:UniRef50_A0A380FXX1,UniRef:UniRef90_A0A221KKV6
contig_1	Pyrodigal	gene	86003	88066	.	+	.	ID=GCA000560365_00080_gene;locus_tag=GCA000560365_00080;gene=copB
contig_1	Pyrodigal	CDS	86003	88066	.	+	0	ID=GCA000560365_00080;Name=putative copper-transporting P-type ATPase B;locus_tag=GCA000560365_00080;product=putative copper-transporting P-type ATPase B;Dbxref=GO:0005507,GO:0005524,GO:0005886,GO:0016887,GO:0043682,GO:0055070,GO:0140581;gene=copB;Parent=GCA000560365_00080_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2217,COG:P,RefSeq:WP_001063476.1,SO:0001217,UniParc:UPI0001EFF118,UniRef:UniRef100_Q2FKI2,UniRef:UniRef50_Q5HKB0,UniRef:UniRef90_Q5HKB0;ec_number=7.2.2.8
contig_1	Pyrodigal	gene	88084	88629	.	+	.	ID=GCA000560365_00081_gene;locus_tag=GCA000560365_00081
contig_1	Pyrodigal	CDS	88084	88629	.	+	0	ID=GCA000560365_00081;Name=DUF1541 domain-containing protein;locus_tag=GCA000560365_00081;product=DUF1541 domain-containing protein;Parent=GCA000560365_00081_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000592150.1,SO:0001217,UniParc:UPI0000696B7D,UniRef:UniRef100_U5NZ39,UniRef:UniRef50_A0A0B5KSV7,UniRef:UniRef90_A0A0B5KSV7
contig_1	Pyrodigal	gene	89394	91145	.	+	.	ID=GCA000560365_00082_gene;locus_tag=GCA000560365_00082
contig_1	Pyrodigal	CDS	89394	91145	.	+	0	ID=GCA000560365_00082;Name=TIGR04141 family sporadically distributed protein;locus_tag=GCA000560365_00082;product=TIGR04141 family sporadically distributed protein;Parent=GCA000560365_00082_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000700191.1,SO:0001217,UniParc:UPI0000696B7E,UniRef:UniRef100_A0A5P6T026,UniRef:UniRef50_Q2G2E9,UniRef:UniRef90_Q2G2E9
contig_1	Pyrodigal	gene	91239	91691	.	-	.	ID=GCA000560365_00083_gene;locus_tag=GCA000560365_00083;gene=dus
contig_1	Pyrodigal	CDS	91239	91691	.	-	0	ID=GCA000560365_00083;Name=putative tRNA-dihydrouridine synthase;locus_tag=GCA000560365_00083;product=putative tRNA-dihydrouridine synthase;Dbxref=GO:0000049,GO:0017150,GO:0050660;gene=dus;Parent=GCA000560365_00083_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0042,COG:J,RefSeq:WP_000048258.1,SO:0001217,UniParc:UPI0000054A9F,UniRef:UniRef100_Q2G2E8,UniRef:UniRef50_O31546,UniRef:UniRef90_Q5HJT5;ec_number=1.3.1.-
contig_1	Pyrodigal	gene	91906	92661	.	-	.	ID=GCA000560365_00084_gene;locus_tag=GCA000560365_00084;gene=tauE
contig_1	Pyrodigal	CDS	91906	92661	.	-	0	ID=GCA000560365_00084;Name=putative membrane transporter protein;locus_tag=GCA000560365_00084;product=putative membrane transporter protein;gene=tauE;Parent=GCA000560365_00084_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0730,COG:P,RefSeq:WP_000355845.1,SO:0001217,UniParc:UPI0000054A9E,UniRef:UniRef100_Q2G2E7,UniRef:UniRef50_A0A0H2G7M4,UniRef:UniRef90_A0A0H2G7M4
contig_1	Pyrodigal	gene	92661	92921	.	-	.	ID=GCA000560365_00085_gene;locus_tag=GCA000560365_00085;gene=cstR
contig_1	Pyrodigal	CDS	92661	92921	.	-	0	ID=GCA000560365_00085;Name=persulfide-sensing transcriptional repressor CstR;locus_tag=GCA000560365_00085;product=persulfide-sensing transcriptional repressor CstR;gene=cstR;Parent=GCA000560365_00085_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001105087,RefSeq:WP_001105087.1,SO:0001217,UniParc:UPI00000D9B94,UniRef:UniRef100_Q2G1R8,UniRef:UniRef50_Q2G1R8,UniRef:UniRef90_Q2G1R8
contig_1	Pyrodigal	gene	93058	94125	.	+	.	ID=GCA000560365_00086_gene;locus_tag=GCA000560365_00086;gene=cstA
contig_1	Pyrodigal	CDS	93058	94125	.	+	0	ID=GCA000560365_00086;Name=persulfide response sulfurtransferase CstA;locus_tag=GCA000560365_00086;product=persulfide response sulfurtransferase CstA;gene=cstA;Parent=GCA000560365_00086_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001837745,COG:C,COG:COG2210,RefSeq:WP_000816129.1,SO:0001217,UniParc:UPI0000054A9C,UniRef:UniRef100_Q2G1R7,UniRef:UniRef50_B9DJV1,UniRef:UniRef90_A0A380DHL7
contig_1	Pyrodigal	gene	94156	95490	.	+	.	ID=GCA000560365_00087_gene;locus_tag=GCA000560365_00087;gene=cstB
contig_1	Pyrodigal	CDS	94156	95490	.	+	0	ID=GCA000560365_00087;Name=persulfide dioxygenase-sulfurtransferase CstB;locus_tag=GCA000560365_00087;product=persulfide dioxygenase-sulfurtransferase CstB;gene=cstB;Parent=GCA000560365_00087_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000465472,COG:COG0607,COG:P,RefSeq:WP_000465472.1,SO:0001217,UniParc:UPI00000D7846,UniRef:UniRef100_G5ELA4,UniRef:UniRef50_G5ELA4,UniRef:UniRef90_G5ELA4
contig_1	Pyrodigal	gene	95509	95763	.	+	.	ID=GCA000560365_00088_gene;locus_tag=GCA000560365_00088;gene=fadH2
contig_1	Pyrodigal	CDS	95509	95763	.	+	0	ID=GCA000560365_00088;Name=FAD-dependent pyridine nucleotide-disulfide oxidoreductase;locus_tag=GCA000560365_00088;product=FAD-dependent pyridine nucleotide-disulfide oxidoreductase;gene=fadH2;Parent=GCA000560365_00088_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0446,COG:I,SO:0001217,UniParc:UPI00024E41D9,UniRef:UniRef100_Q2G1R5,UniRef:UniRef50_A0A1D4R4A9,UniRef:UniRef90_A0A380DIU2
contig_1	Pyrodigal	gene	96013	96702	.	+	.	ID=GCA000560365_00089_gene;locus_tag=GCA000560365_00089;gene=fadH2
contig_1	Pyrodigal	CDS	96013	96702	.	+	0	ID=GCA000560365_00089;Name=FAD-dependent pyridine nucleotide-disulfide oxidoreductase;locus_tag=GCA000560365_00089;product=FAD-dependent pyridine nucleotide-disulfide oxidoreductase;gene=fadH2;Parent=GCA000560365_00089_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0446,COG:I,SO:0001217,UniParc:UPI0001B3B48D,UniRef:UniRef100_Q2G1R5,UniRef:UniRef50_A0A1D4R4A9,UniRef:UniRef90_A0A380DIU2
contig_1	Pyrodigal	gene	97369	98355	.	-	.	ID=GCA000560365_00090_gene;locus_tag=GCA000560365_00090;gene=dus
contig_1	Pyrodigal	CDS	97369	98355	.	-	0	ID=GCA000560365_00090;Name=putative tRNA-dihydrouridine synthase;locus_tag=GCA000560365_00090;product=putative tRNA-dihydrouridine synthase;Dbxref=GO:0000049,GO:0017150,GO:0050660;gene=dus;Parent=GCA000560365_00090_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0042,COG:J,RefSeq:WP_000662031.1,SO:0001217,UniParc:UPI0000054A97,UniRef:UniRef100_Q5HJT5,UniRef:UniRef50_O31546,UniRef:UniRef90_Q5HJT5;ec_number=1.3.1.-
contig_1	Pyrodigal	gene	98916	99212	.	+	.	ID=GCA000560365_00091_gene;locus_tag=GCA000560365_00091;gene=tfoX
contig_1	Pyrodigal	CDS	98916	99212	.	+	0	ID=GCA000560365_00091;Name=TfoX N-terminal domain-containing protein;locus_tag=GCA000560365_00091;product=TfoX N-terminal domain-containing protein;gene=tfoX;Parent=GCA000560365_00091_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000201638.1,SO:0001217,UniParc:UPI0000696B7F,UniRef:UniRef100_A0A5A8VU47,UniRef:UniRef50_Q2G1R1,UniRef:UniRef90_Q2G1R1
contig_1	Pyrodigal	gene	99284	100504	.	-	.	ID=GCA000560365_00092_gene;locus_tag=GCA000560365_00092
contig_1	Pyrodigal	CDS	99284	100504	.	-	0	ID=GCA000560365_00092;Name=Major facilitator superfamily (MFS) profile domain-containing protein;locus_tag=GCA000560365_00092;product=Major facilitator superfamily (MFS) profile domain-containing protein;Parent=GCA000560365_00092_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000130765.1,SO:0001217,UniParc:UPI0000696B80,UniRef:UniRef100_A0A0E8JC85,UniRef:UniRef50_Q2G1R0,UniRef:UniRef90_Q2G1R0
contig_1	Pyrodigal	gene	100497	100982	.	-	.	ID=GCA000560365_00093_gene;locus_tag=GCA000560365_00093
contig_1	Pyrodigal	CDS	100497	100982	.	-	0	ID=GCA000560365_00093;Name=Flavodoxin;locus_tag=GCA000560365_00093;product=Flavodoxin;Parent=GCA000560365_00093_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000157444E,UniRef:UniRef100_A0A2C9TJP4,UniRef:UniRef50_A0A9Q9BMX3,UniRef:UniRef90_A0A2C9TJP4
contig_1	Pyrodigal	gene	101160	102020	.	+	.	ID=GCA000560365_00094_gene;locus_tag=GCA000560365_00094
contig_1	Pyrodigal	CDS	101160	102020	.	+	0	ID=GCA000560365_00094;Name=HTH lysR-type domain-containing protein;locus_tag=GCA000560365_00094;product=HTH lysR-type domain-containing protein;Parent=GCA000560365_00094_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001052510.1,SO:0001217,UniParc:UPI00000D9B98,UniRef:UniRef100_Q2G1Q8,UniRef:UniRef50_W1Y6F5,UniRef:UniRef90_Q2G1Q8
contig_1	Pyrodigal	gene	102375	102908	.	-	.	ID=GCA000560365_00095_gene;locus_tag=GCA000560365_00095
contig_1	Pyrodigal	CDS	102375	102908	.	-	0	ID=GCA000560365_00095;Name=DUF4865 domain-containing protein;locus_tag=GCA000560365_00095;product=DUF4865 domain-containing protein;Parent=GCA000560365_00095_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000543163.1,SO:0001217,UniParc:UPI0000054A91,UniRef:UniRef100_Q2G1Q7,UniRef:UniRef50_Q2G1Q7,UniRef:UniRef90_Q2G1Q7
contig_1	Pyrodigal	gene	103008	103742	.	+	.	ID=GCA000560365_00096_gene;locus_tag=GCA000560365_00096
contig_1	Pyrodigal	CDS	103008	103742	.	+	0	ID=GCA000560365_00096;Name=HTH lysR-type domain-containing protein;locus_tag=GCA000560365_00096;product=HTH lysR-type domain-containing protein;Parent=GCA000560365_00096_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D9B99,UniRef:UniRef100_A0A2C9TJ04,UniRef:UniRef50_Q2G1Q6,UniRef:UniRef90_Q2G1Q6
contig_1	Pyrodigal	gene	104176	104778	.	+	.	ID=GCA000560365_00097_gene;locus_tag=GCA000560365_00097
contig_1	Pyrodigal	CDS	104176	104778	.	+	0	ID=GCA000560365_00097;Name=DUF5079 domain-containing protein;locus_tag=GCA000560365_00097;product=DUF5079 domain-containing protein;Parent=GCA000560365_00097_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000908952.1,SO:0001217,UniParc:UPI00004B5A84,UniRef:UniRef100_Q2G1Q5,UniRef:UniRef50_A0A6G4N7I9,UniRef:UniRef90_A0A6G4N7I9
contig_1	Pyrodigal	gene	105045	108197	.	+	.	ID=GCA000560365_00098_gene;locus_tag=GCA000560365_00098;gene=dNA2
contig_1	Pyrodigal	CDS	105045	108197	.	+	0	ID=GCA000560365_00098;Name=RecBCD enzyme subunit RecD;locus_tag=GCA000560365_00098;product=RecBCD enzyme subunit RecD;gene=dNA2;Parent=GCA000560365_00098_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1112,COG:L,RefSeq:WP_000080557.1,SO:0001217,UniParc:UPI0000696B82,UniRef:UniRef100_A0A1S5ZQD2,UniRef:UniRef50_Q4A109,UniRef:UniRef90_A0A6N3FDN4
contig_1	Pyrodigal	gene	108254	108736	.	+	.	ID=GCA000560365_00099_gene;locus_tag=GCA000560365_00099
contig_1	Pyrodigal	CDS	108254	108736	.	+	0	ID=GCA000560365_00099;Name=DUF3278 domain-containing protein;locus_tag=GCA000560365_00099;product=DUF3278 domain-containing protein;Parent=GCA000560365_00099_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000410568.1,SO:0001217,UniParc:UPI0000054A8C,UniRef:UniRef100_Q2G1Q3,UniRef:UniRef50_Q2G1Q3,UniRef:UniRef90_Q2G1Q3
contig_1	Pyrodigal	gene	108941	109927	.	+	.	ID=GCA000560365_00100_gene;locus_tag=GCA000560365_00100;gene=plc
contig_1	Pyrodigal	CDS	108941	109927	.	+	0	ID=GCA000560365_00100;Name=1-phosphatidylinositol phosphodiesterase;locus_tag=GCA000560365_00100;product=1-phosphatidylinositol phosphodiesterase;Dbxref=GO:0004436,GO:0005576,GO:0008081,GO:0016042;gene=plc;Parent=GCA000560365_00100_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000710576.1,SO:0001217,UniParc:UPI0000054A8B,UniRef:UniRef100_Q2G1Q2,UniRef:UniRef50_Q2G1Q2,UniRef:UniRef90_Q2G1Q2;ec_number=4.6.1.13
contig_1	Pyrodigal	gene	110148	110918	.	+	.	ID=GCA000560365_00101_gene;locus_tag=GCA000560365_00101
contig_1	Pyrodigal	CDS	110148	110918	.	+	0	ID=GCA000560365_00101;Name=putative lipoprotein SAS0072;locus_tag=GCA000560365_00101;product=putative lipoprotein SAS0072;Dbxref=GO:0005886;Parent=GCA000560365_00101_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000977774.1,SO:0001217,UniParc:UPI0000054A8A,UniRef:UniRef100_Q2G1Q1,UniRef:UniRef50_Q2G1Q1,UniRef:UniRef90_Q2G1Q1
contig_1	Pyrodigal	gene	110937	111740	.	+	.	ID=GCA000560365_00102_gene;locus_tag=GCA000560365_00102
contig_1	Pyrodigal	CDS	110937	111740	.	+	0	ID=GCA000560365_00102;Name=putative lipoprotein MW0072;locus_tag=GCA000560365_00102;product=putative lipoprotein MW0072;Dbxref=GO:0005886;Parent=GCA000560365_00102_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000054A89,UniRef:UniRef100_A0A133PUY2,UniRef:UniRef50_Q2YVQ6,UniRef:UniRef90_Q8NYU1
contig_1	Pyrodigal	gene	111804	112574	.	+	.	ID=GCA000560365_00103_gene;locus_tag=GCA000560365_00103
contig_1	Pyrodigal	CDS	111804	112574	.	+	0	ID=GCA000560365_00103;Name=putative lipoprotein SAUSA300_0102;locus_tag=GCA000560365_00103;product=putative lipoprotein SAUSA300_0102;Dbxref=GO:0005886;Parent=GCA000560365_00103_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000977781.1,SO:0001217,UniParc:UPI0000054A88,UniRef:UniRef100_Q2G1P9,UniRef:UniRef50_Q2G1P9,UniRef:UniRef90_Q2G1P9
contig_1	Pyrodigal	gene	112641	113408	.	+	.	ID=GCA000560365_00104_gene;locus_tag=GCA000560365_00104
contig_1	Pyrodigal	CDS	112641	113408	.	+	0	ID=GCA000560365_00104;Name=putative lipoprotein SACOL0083;locus_tag=GCA000560365_00104;product=putative lipoprotein SACOL0083;Dbxref=GO:0005886;Parent=GCA000560365_00104_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000826311.1,SO:0001217,UniParc:UPI0000054A87,UniRef:UniRef100_Q2G1P8,UniRef:UniRef50_Q2G1Q1,UniRef:UniRef90_Q2G1P8
contig_1	Pyrodigal	gene	113502	115739	.	+	.	ID=GCA000560365_00105_gene;locus_tag=GCA000560365_00105;gene=aryK
contig_1	Pyrodigal	CDS	113502	115739	.	+	0	ID=GCA000560365_00105;Name=transcriptional regulator AryK;locus_tag=GCA000560365_00105;product=transcriptional regulator AryK;Dbxref=GO:0003700,GO:0043565;gene=aryK;Parent=GCA000560365_00105_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3664,COG:G,RefSeq:WP_001188495.1,SO:0001217,UniParc:UPI0000054A86,UniRef:UniRef100_Q5HJR8,UniRef:UniRef50_Q5HJR8,UniRef:UniRef90_Q5HJR8
contig_1	Pyrodigal	gene	115890	117068	.	+	.	ID=GCA000560365_00106_gene;locus_tag=GCA000560365_00106;gene=abgB
contig_1	Pyrodigal	CDS	115890	117068	.	+	0	ID=GCA000560365_00106;Name=Peptidase M20 dimerisation domain-containing protein;locus_tag=GCA000560365_00106;product=Peptidase M20 dimerisation domain-containing protein;gene=abgB;Parent=GCA000560365_00106_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1473,COG:R,RefSeq:WP_001075826.1,SO:0001217,UniParc:UPI00004B5A89,UniRef:UniRef100_Q2G1P6,UniRef:UniRef50_A0A380FVH8,UniRef:UniRef90_Q2G1P6
contig_1	Pyrodigal	gene	117070	118458	.	+	.	ID=GCA000560365_00107_gene;locus_tag=GCA000560365_00107;gene=uhpC
contig_1	Pyrodigal	CDS	117070	118458	.	+	0	ID=GCA000560365_00107;Name=Quinolone resistance protein NorB;locus_tag=GCA000560365_00107;product=Quinolone resistance protein NorB;gene=uhpC;Parent=GCA000560365_00107_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2271,COG:G,RefSeq:WP_001006445.1,SO:0001217,UniParc:UPI00004B5A8A,UniRef:UniRef100_A0A0E7VUI8,UniRef:UniRef50_Q2FYJ5,UniRef:UniRef90_Q9F0Z2
contig_1	Pyrodigal	gene	118951	120618	.	-	.	ID=GCA000560365_00108_gene;locus_tag=GCA000560365_00108;gene=nptA
contig_1	Pyrodigal	CDS	118951	120618	.	-	0	ID=GCA000560365_00108;Name=PhoU domain-containing protein;locus_tag=GCA000560365_00108;product=PhoU domain-containing protein;gene=nptA;Parent=GCA000560365_00108_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1283,COG:P,SO:0001217,UniParc:UPI0000054A82,UniRef:UniRef100_Q2G1P4,UniRef:UniRef50_Q2G1P4,UniRef:UniRef90_Q2G1P4
contig_1	Pyrodigal	gene	120938	122713	.	-	.	ID=GCA000560365_00109_gene;locus_tag=GCA000560365_00109
contig_1	Pyrodigal	CDS	120938	122713	.	-	0	ID=GCA000560365_00109;Name=oleate hydratase;locus_tag=GCA000560365_00109;product=oleate hydratase;Dbxref=GO:0006631,GO:0050151,GO:0071949;Parent=GCA000560365_00109_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4716,COG:S,RefSeq:WP_000291842.1,SO:0001217,UniParc:UPI00004B5A8D,UniRef:UniRef100_Q2G1P3,UniRef:UniRef50_B5XK69,UniRef:UniRef90_Q2G1P3;ec_number=4.2.1.53
contig_1	Pyrodigal	gene	122887	123759	.	-	.	ID=GCA000560365_00110_gene;locus_tag=GCA000560365_00110;gene=rhaT
contig_1	Pyrodigal	CDS	122887	123759	.	-	0	ID=GCA000560365_00110;Name=EamA domain-containing protein;locus_tag=GCA000560365_00110;product=EamA domain-containing protein;gene=rhaT;Parent=GCA000560365_00110_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0697,COG:GER,RefSeq:WP_001038026.1,SO:0001217,UniParc:UPI0000696B83,UniRef:UniRef100_A0A5A8VS45,UniRef:UniRef50_Q2G1P2,UniRef:UniRef90_Q2G1P2
contig_1	Pyrodigal	gene	123872	125269	.	+	.	ID=GCA000560365_00111_gene;locus_tag=GCA000560365_00111;gene=norG
contig_1	Pyrodigal	CDS	123872	125269	.	+	0	ID=GCA000560365_00111;Name=HTH-type transcriptional regulator NorG;locus_tag=GCA000560365_00111;product=HTH-type transcriptional regulator NorG;Dbxref=GO:0003677,GO:0003700,GO:0008483,GO:0009058,GO:0030170,GO:1901605;gene=norG;Parent=GCA000560365_00111_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1167,COG:KE,KEGG:K18907,RefSeq:WP_001151814.1,SO:0001217,UniParc:UPI00004B5A8E,UniRef:UniRef100_Q2G1P1,UniRef:UniRef50_Q2G1P1,UniRef:UniRef90_Q2G1P1
contig_1	Pyrodigal	gene	125459	125932	.	+	.	ID=GCA000560365_00112_gene;locus_tag=GCA000560365_00112
contig_1	Pyrodigal	CDS	125459	125932	.	+	0	ID=GCA000560365_00112;Name=DUF1648 domain-containing protein;locus_tag=GCA000560365_00112;product=DUF1648 domain-containing protein;Parent=GCA000560365_00112_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000036327.1,SO:0001217,UniParc:UPI00004B5A8F,UniRef:UniRef100_Q2G1P0,UniRef:UniRef50_Q2G1P0,UniRef:UniRef90_Q2G1P0
contig_1	Pyrodigal	gene	126194	127786	.	+	.	ID=GCA000560365_00113_gene;locus_tag=GCA000560365_00113;gene=lldP
contig_1	Pyrodigal	CDS	126194	127786	.	+	0	ID=GCA000560365_00113;Name=L-lactate permease;locus_tag=GCA000560365_00113;product=L-lactate permease;gene=lldP;Parent=GCA000560365_00113_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1620,KEGG:K03303,RefSeq:WP_000173902.1,SO:0001217,UniParc:UPI0000054A7C,UniRef:UniRef100_Q2G1N9,UniRef:UniRef50_Q9K5Z9,UniRef:UniRef90_A0A2K4AMZ7
contig_1	Pyrodigal	gene	128115	129593	.	-	.	ID=GCA000560365_00114_gene;locus_tag=GCA000560365_00114;gene=spa
contig_1	Pyrodigal	CDS	128115	129593	.	-	0	ID=GCA000560365_00114;Name=Immunoglobulin G binding protein A precursor;locus_tag=GCA000560365_00114;product=Immunoglobulin G binding protein A precursor;Dbxref=GO:0005576,GO:0019865;gene=spa;Parent=GCA000560365_00114_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K14196,RefSeq:WP_000728761.1,SO:0001217,UniParc:UPI0002C94430,UniRef:UniRef100_UPI0002C94430,UniRef:UniRef50_P02976,UniRef:UniRef90_P02976,VFDB:VFC0235,VFDB:VFG001313
contig_1	Pyrodigal	gene	130014	130766	.	-	.	ID=GCA000560365_00115_gene;locus_tag=GCA000560365_00115;gene=sarS
contig_1	Pyrodigal	CDS	130014	130766	.	-	0	ID=GCA000560365_00115;Name=HTH-type transcriptional regulator SarS;locus_tag=GCA000560365_00115;product=HTH-type transcriptional regulator SarS;Dbxref=GO:0003677,GO:0003700,GO:0005737,GO:0006950;gene=sarS;Parent=GCA000560365_00115_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000876756,COG:COG1846,COG:K,RefSeq:WP_000876756.1,SO:0001217,UniParc:UPI00000D76F7,UniRef:UniRef100_Q2G1N7,UniRef:UniRef50_Q2G1N7,UniRef:UniRef90_Q2G1N7
contig_1	Pyrodigal	gene	131135	132133	.	-	.	ID=GCA000560365_00116_gene;locus_tag=GCA000560365_00116;gene=fepD
contig_1	Pyrodigal	CDS	131135	132133	.	-	0	ID=GCA000560365_00116;Name=staphyloferrin B ABC transporter permease subunit SirC;locus_tag=GCA000560365_00116;product=staphyloferrin B ABC transporter permease subunit SirC;gene=fepD;Parent=GCA000560365_00116_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000136636,COG:COG0609,COG:P,RefSeq:WP_000136636.1,SO:0001217,UniParc:UPI00000B6FE6,UniRef:UniRef100_Q2G1N6,UniRef:UniRef50_A0A389V9I4,UniRef:UniRef90_A0A389V9I4
contig_1	Pyrodigal	gene	132130	133125	.	-	.	ID=GCA000560365_00117_gene;locus_tag=GCA000560365_00117;gene=fepD
contig_1	Pyrodigal	CDS	132130	133125	.	-	0	ID=GCA000560365_00117;Name=staphyloferrin B ABC transporter permease subunit SirB;locus_tag=GCA000560365_00117;product=staphyloferrin B ABC transporter permease subunit SirB;gene=fepD;Parent=GCA000560365_00117_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000925002,COG:COG0609,COG:P,RefSeq:WP_000924997.1,SO:0001217,UniParc:UPI0000054A78,UniRef:UniRef100_Q2G1N5,UniRef:UniRef50_A0A0H2WZW5,UniRef:UniRef90_A0A0H2WZW5
contig_1	Pyrodigal	gene	133141	134133	.	-	.	ID=GCA000560365_00118_gene;locus_tag=GCA000560365_00118;gene=fepB
contig_1	Pyrodigal	CDS	133141	134133	.	-	0	ID=GCA000560365_00118;Name=staphyloferrin B ABC transporter substrate-binding protein SirA;locus_tag=GCA000560365_00118;product=staphyloferrin B ABC transporter substrate-binding protein SirA;gene=fepB;Parent=GCA000560365_00118_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001045111,COG:COG0614,COG:P,RefSeq:WP_001045111.1,SO:0001217,UniParc:UPI00000522E5,UniRef:UniRef100_Q2G1N4,UniRef:UniRef50_S2XE72,UniRef:UniRef90_A0A7U7IE32
contig_1	Pyrodigal	gene	134364	135344	.	+	.	ID=GCA000560365_00119_gene;locus_tag=GCA000560365_00119;gene=sbnA
contig_1	Pyrodigal	CDS	134364	135344	.	+	0	ID=GCA000560365_00119;Name=2%2C3-diaminopropionate biosynthesis protein SbnA;locus_tag=GCA000560365_00119;product=2%2C3-diaminopropionate biosynthesis protein SbnA;Dbxref=GO:0006535,GO:0009058,GO:0016765,GO:0030170;gene=sbnA;Parent=GCA000560365_00119_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000570808,COG:COG0031,COG:E,RefSeq:WP_000570808.1,SO:0001217,UniParc:UPI00000D7883,UniRef:UniRef100_Q2G1N3,UniRef:UniRef50_Q2G1N3,UniRef:UniRef90_Q2G1N3;ec_number=2.5.1.140
contig_1	Pyrodigal	gene	135341	136351	.	+	.	ID=GCA000560365_00120_gene;locus_tag=GCA000560365_00120;gene=sbnB
contig_1	Pyrodigal	CDS	135341	136351	.	+	0	ID=GCA000560365_00120;Name=N-[(2S)-2-amino-2-carboxyethyl]-L-glutamate dehydrogenase SbnB;locus_tag=GCA000560365_00120;product=N-[(2S)-2-amino-2-carboxyethyl]-L-glutamate dehydrogenase SbnB;Dbxref=GO:0016491,GO:0016639,GO:0019290;gene=sbnB;Parent=GCA000560365_00120_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001078456,COG:COG2423,COG:E,KEGG:K21721,RefSeq:WP_001078456.1,SO:0001217,UniParc:UPI00000522AC,UniRef:UniRef100_Q2G1N2,UniRef:UniRef50_Q2G1N2,UniRef:UniRef90_Q2G1N2;ec_number=1.5.1.51
contig_1	Pyrodigal	gene	136372	138126	.	+	.	ID=GCA000560365_00121_gene;locus_tag=GCA000560365_00121;gene=sbnC
contig_1	Pyrodigal	CDS	136372	138126	.	+	0	ID=GCA000560365_00121;Name=staphyloferrin B biosynthesis protein SbnC;locus_tag=GCA000560365_00121;product=staphyloferrin B biosynthesis protein SbnC;Dbxref=GO:0005524,GO:0016881,GO:0019290;gene=sbnC;Parent=GCA000560365_00121_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4264,COG:P,KEGG:K23375,RefSeq:WP_001179384.1,SO:0001217,UniParc:UPI000022FC5D,UniRef:UniRef100_Q2G1N1,UniRef:UniRef50_Q2G1N1,UniRef:UniRef90_Q2G1N1;ec_number=6.3.2.56
contig_1	Pyrodigal	gene	138203	139375	.	+	.	ID=GCA000560365_00122_gene;locus_tag=GCA000560365_00122;gene=sbnD
contig_1	Pyrodigal	CDS	138203	139375	.	+	0	ID=GCA000560365_00122;Name=staphyloferrin B export MFS transporter;locus_tag=GCA000560365_00122;product=staphyloferrin B export MFS transporter;Dbxref=GO:0005886,GO:0022857;gene=sbnD;Parent=GCA000560365_00122_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000572580,COG:COG2814,COG:G,KEGG:K23361,SO:0001217,UniParc:UPI0002506763,UniRef:UniRef100_A0A380E472,UniRef:UniRef50_Q2G1N0,UniRef:UniRef90_Q2G1N0
contig_1	Pyrodigal	gene	139365	141101	.	+	.	ID=GCA000560365_00123_gene;locus_tag=GCA000560365_00123;gene=sbnE
contig_1	Pyrodigal	CDS	139365	141101	.	+	0	ID=GCA000560365_00123;Name=L-2%2C3-diaminopropanoate--citrate ligase SbnE;locus_tag=GCA000560365_00123;product=L-2%2C3-diaminopropanoate--citrate ligase SbnE;Dbxref=GO:0005524,GO:0016881,GO:0019290;gene=sbnE;Parent=GCA000560365_00123_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001179886,COG:COG4264,COG:P,KEGG:K23372,RefSeq:WP_001179888.1,SO:0001217,UniParc:UPI00000D9BAC,UniRef:UniRef100_Q2G1M9,UniRef:UniRef50_Q2G1M9,UniRef:UniRef90_Q2G1M9;ec_number=6.3.2.54
contig_1	Pyrodigal	gene	141082	142860	.	+	.	ID=GCA000560365_00124_gene;locus_tag=GCA000560365_00124;gene=sbnF
contig_1	Pyrodigal	CDS	141082	142860	.	+	0	ID=GCA000560365_00124;Name=3-(L-alanin-3-ylcarbamoyl)-2-[(2-aminoethylcarbamoyl)methyl]-2-hydroxypropanoate synthase SbnF;locus_tag=GCA000560365_00124;product=3-(L-alanin-3-ylcarbamoyl)-2-[(2-aminoethylcarbamoyl)methyl]-2-hydroxypropanoate synthase SbnF;Dbxref=GO:0005524,GO:0016881,GO:0019290;gene=sbnF;Parent=GCA000560365_00124_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001795559,COG:COG4264,COG:P,KEGG:K23374,SO:0001217,UniParc:UPI00004B5A94,UniRef:UniRef100_A0A0D6GJC0,UniRef:UniRef50_Q2G1M8,UniRef:UniRef90_Q2G1M8;ec_number=6.3.2.55
contig_1	Pyrodigal	gene	142832	143611	.	+	.	ID=GCA000560365_00125_gene;locus_tag=GCA000560365_00125;gene=sbnG
contig_1	Pyrodigal	CDS	142832	143611	.	+	0	ID=GCA000560365_00125;Name=staphyloferrin B biosynthesis citrate synthase SbnG;locus_tag=GCA000560365_00125;product=staphyloferrin B biosynthesis citrate synthase SbnG;gene=sbnG;Parent=GCA000560365_00125_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001549999,COG:COG3836,COG:G,SO:0001217,UniParc:UPI0000054710,UniRef:UniRef100_Q2G1M7,UniRef:UniRef50_Q2G1M7,UniRef:UniRef90_Q2G1M7
contig_1	Pyrodigal	gene	143611	144813	.	+	.	ID=GCA000560365_00126_gene;locus_tag=GCA000560365_00126;gene=sbnH
contig_1	Pyrodigal	CDS	143611	144813	.	+	0	ID=GCA000560365_00126;Name=staphyloferrin B biosynthesis decarboxylase SbnH;locus_tag=GCA000560365_00126;product=staphyloferrin B biosynthesis decarboxylase SbnH;Dbxref=GO:0006596,GO:0008836,GO:0009089,GO:0016831,GO:0019290;gene=sbnH;Parent=GCA000560365_00126_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001223700,COG:COG0019,COG:E,KEGG:K01586,RefSeq:WP_001223700.1,SO:0001217,UniParc:UPI000005470F,UniRef:UniRef100_Q2G1M6,UniRef:UniRef50_Q2G1M6,UniRef:UniRef90_Q2G1M6;ec_number=4.1.1.117
contig_1	Pyrodigal	gene	144817	145581	.	+	.	ID=GCA000560365_00127_gene;locus_tag=GCA000560365_00127;gene=sbnI
contig_1	Pyrodigal	CDS	144817	145581	.	+	0	ID=GCA000560365_00127;Name=L-serine kinase SbnI;locus_tag=GCA000560365_00127;product=L-serine kinase SbnI;Dbxref=GO:0003677,GO:0005524,GO:0005694,GO:0007059,GO:0016301,GO:0016773,GO:0019290,GO:0045881;gene=sbnI;Parent=GCA000560365_00127_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001015549,COG:COG1475,COG:D,KEGG:K23371,RefSeq:WP_001015549.1,SO:0001217,UniParc:UPI00000D772E,UniRef:UniRef100_Q2G1M5,UniRef:UniRef50_Q2G1M5,UniRef:UniRef90_Q2G1M5;ec_number=2.7.1.225
contig_1	Pyrodigal	gene	145777	146184	.	+	.	ID=GCA000560365_00128_gene;locus_tag=GCA000560365_00128
contig_1	Pyrodigal	CDS	145777	146184	.	+	0	ID=GCA000560365_00128;Name=MFS transporter;locus_tag=GCA000560365_00128;product=MFS transporter;Parent=GCA000560365_00128_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000094899.1,SO:0001217,UniParc:UPI00004B5A96,UniRef:UniRef100_Q2G1M3,UniRef:UniRef50_A0AAP8CQG4,UniRef:UniRef90_Q2G1M3
contig_1	Pyrodigal	gene	146234	146860	.	+	.	ID=GCA000560365_00129_gene;locus_tag=GCA000560365_00129
contig_1	Pyrodigal	CDS	146234	146860	.	+	0	ID=GCA000560365_00129;Name=MFS transporter;locus_tag=GCA000560365_00129;product=MFS transporter;Parent=GCA000560365_00129_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000414628.1,SO:0001217,UniParc:UPI000005470C,UniRef:UniRef100_Q2G1M2,UniRef:UniRef50_Q2G1M2,UniRef:UniRef90_Q2G1M2
contig_1	Pyrodigal	gene	147072	147848	.	+	.	ID=GCA000560365_00130_gene;locus_tag=GCA000560365_00130;gene=butA
contig_1	Pyrodigal	CDS	147072	147848	.	+	0	ID=GCA000560365_00130;Name=(S)-acetoin forming diacetyl reductase;locus_tag=GCA000560365_00130;product=(S)-acetoin forming diacetyl reductase;Dbxref=GO:0019152,GO:0045150,GO:0052588;gene=butA;Parent=GCA000560365_00130_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1028,COG:I,RefSeq:WP_000183771.1,SO:0001217,UniParc:UPI00000D7675,UniRef:UniRef100_Q5HJP2,UniRef:UniRef50_Q5HJP2,UniRef:UniRef90_Q5HJP2;ec_number=1.1.1.304
contig_1	Pyrodigal	gene	148193	149164	.	+	.	ID=GCA000560365_00131_gene;locus_tag=GCA000560365_00131;gene=wcaG
contig_1	Pyrodigal	CDS	148193	149164	.	+	0	ID=GCA000560365_00131;Name=NAD-dependent dehydratase;locus_tag=GCA000560365_00131;product=NAD-dependent dehydratase;gene=wcaG;Parent=GCA000560365_00131_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0451,COG:M,SO:0001217,UniParc:UPI00004B5A97,UniRef:UniRef100_A0A266CPK4,UniRef:UniRef50_Q2MGY5,UniRef:UniRef90_Q2MGY5
contig_1	Pyrodigal	gene	149127	149819	.	+	.	ID=GCA000560365_00132_gene;locus_tag=GCA000560365_00132;gene=wcaJ
contig_1	Pyrodigal	CDS	149127	149819	.	+	0	ID=GCA000560365_00132;Name=Bacterial sugar transferase domain-containing protein;locus_tag=GCA000560365_00132;product=Bacterial sugar transferase domain-containing protein;gene=wcaJ;Parent=GCA000560365_00132_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2148,COG:M,RefSeq:WP_000736084.1,SO:0001217,UniParc:UPI00000D9BB2,UniRef:UniRef100_Q2G287,UniRef:UniRef50_Q2G287,UniRef:UniRef90_Q2G287
contig_1	Pyrodigal	gene	150029	151195	.	+	.	ID=GCA000560365_00133_gene;locus_tag=GCA000560365_00133;gene=rfaB
contig_1	Pyrodigal	CDS	150029	151195	.	+	0	ID=GCA000560365_00133;Name=Exopolysaccharide biosynthesis glycosyltransferase EpsF;locus_tag=GCA000560365_00133;product=Exopolysaccharide biosynthesis glycosyltransferase EpsF;gene=rfaB;Parent=GCA000560365_00133_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0438,COG:M,RefSeq:WP_000692515.1,SO:0001217,UniParc:UPI0000696B86,UniRef:UniRef100_A0A5A8VQG2,UniRef:UniRef50_A0AAJ4YWB0,UniRef:UniRef90_A0AAJ4YWB0
contig_1	Pyrodigal	gene	151176	152414	.	+	.	ID=GCA000560365_00134_gene;locus_tag=GCA000560365_00134
contig_1	Pyrodigal	CDS	151176	152414	.	+	0	ID=GCA000560365_00134;Name=O-antigen ligase-related domain-containing protein;locus_tag=GCA000560365_00134;product=O-antigen ligase-related domain-containing protein;Parent=GCA000560365_00134_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000431234.1,SO:0001217,UniParc:UPI0000054703,UniRef:UniRef100_Q2G288,UniRef:UniRef50_Q2G288,UniRef:UniRef90_Q2G288
contig_1	Pyrodigal	gene	152404	153834	.	+	.	ID=GCA000560365_00135_gene;locus_tag=GCA000560365_00135;gene=rfbX
contig_1	Pyrodigal	CDS	152404	153834	.	+	0	ID=GCA000560365_00135;Name=Polysaccharide biosynthesis protein C-terminal domain-containing protein;locus_tag=GCA000560365_00135;product=Polysaccharide biosynthesis protein C-terminal domain-containing protein;gene=rfbX;Parent=GCA000560365_00135_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2244,COG:M,RefSeq:WP_000834084.1,SO:0001217,UniParc:UPI00003D0D8A,UniRef:UniRef100_Q2G262,UniRef:UniRef50_Q2G262,UniRef:UniRef90_Q2G262
contig_1	Pyrodigal	gene	154102	154701	.	+	.	ID=GCA000560365_00136_gene;locus_tag=GCA000560365_00136;gene=sodM
contig_1	Pyrodigal	CDS	154102	154701	.	+	0	ID=GCA000560365_00136;Name=Superoxide dismutase [Mn/Fe] 2;locus_tag=GCA000560365_00136;product=Superoxide dismutase [Mn/Fe] 2;Dbxref=GO:0004784,GO:0005737,GO:0046872;gene=sodM;Parent=GCA000560365_00136_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0605,COG:P,KEGG:K04564,RefSeq:WP_000874681.1,SO:0001217,UniParc:UPI0000054701,UniRef:UniRef100_Q2G261,UniRef:UniRef50_Q2G261,UniRef:UniRef90_Q2G261;ec_number=1.15.1.1
contig_1	Pyrodigal	gene	155069	155794	.	+	.	ID=GCA000560365_00137_gene;locus_tag=GCA000560365_00137;gene=sasD
contig_1	Pyrodigal	CDS	155069	155794	.	+	0	ID=GCA000560365_00137;Name=cell-wall-anchored protein SasD;locus_tag=GCA000560365_00137;product=cell-wall-anchored protein SasD;gene=sasD;Parent=GCA000560365_00137_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_070002951,SO:0001217,UniParc:UPI0000052296,UniRef:UniRef100_A0A0D6GL01,UniRef:UniRef50_Q2G260,UniRef:UniRef90_A0A6B0CXZ7
contig_1	Pyrodigal	gene	155986	156726	.	-	.	ID=GCA000560365_00138_gene;locus_tag=GCA000560365_00138;gene=mngR
contig_1	Pyrodigal	CDS	155986	156726	.	-	0	ID=GCA000560365_00138;Name=GntR family transcriptional regulator;locus_tag=GCA000560365_00138;product=GntR family transcriptional regulator;gene=mngR;Parent=GCA000560365_00138_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2188,COG:K,RefSeq:WP_000195132.1,SO:0001217,UniParc:UPI00000D9BB7,UniRef:UniRef100_A0A1M3SHM6,UniRef:UniRef50_S2XH22,UniRef:UniRef90_A0A380DIC9
contig_1	Pyrodigal	gene	156977	157684	.	+	.	ID=GCA000560365_00139_gene;locus_tag=GCA000560365_00139;gene=deoD
contig_1	Pyrodigal	CDS	156977	157684	.	+	0	ID=GCA000560365_00139;Name=purine-nucleoside phosphorylase;locus_tag=GCA000560365_00139;product=purine-nucleoside phosphorylase;Dbxref=GO:0004731,GO:0006139;gene=deoD;Parent=GCA000560365_00139_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0813,COG:F,KEGG:K03784,RefSeq:WP_000843292.1,SO:0001217,UniParc:UPI00000CAD09,UniRef:UniRef100_Q2G228,UniRef:UniRef50_Q894Z3,UniRef:UniRef90_Q2G228;ec_number=2.4.2.1
contig_1	Pyrodigal	gene	157685	159043	.	+	.	ID=GCA000560365_00140_gene;locus_tag=GCA000560365_00140;gene=tet(38)
contig_1	Pyrodigal	CDS	157685	159043	.	+	0	ID=GCA000560365_00140;Name=tetracycline efflux MFS transporter Tet(38);locus_tag=GCA000560365_00140;product=tetracycline efflux MFS transporter Tet(38);Dbxref=GO:0008493,GO:0015904;gene=tet(38);Parent=GCA000560365_00140_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2814,COG:G,KEGG:K08168,NCBIProtein:WP_001100300.1,SO:0001217,UniParc:UPI00000546FC,UniRef:UniRef100_Q2G226,UniRef:UniRef50_A0A658WD55,UniRef:UniRef90_A0A658WD55
contig_1	Pyrodigal	gene	159124	159786	.	+	.	ID=GCA000560365_00141_gene;locus_tag=GCA000560365_00141;gene=deoC
contig_1	Pyrodigal	CDS	159124	159786	.	+	0	ID=GCA000560365_00141;Name=deoxyribose-phosphate aldolase;locus_tag=GCA000560365_00141;product=deoxyribose-phosphate aldolase;Dbxref=GO:0004139,GO:0005737,GO:0009264;gene=deoC;Parent=GCA000560365_00141_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01619,RefSeq:WP_000667275.1,SO:0001217,UniParc:UPI0000696B87,UniRef:UniRef100_A0A5A8W133,UniRef:UniRef50_Q4L819,UniRef:UniRef90_A0A5A8W133;ec_number=4.1.2.4
contig_1	Pyrodigal	gene	159814	160992	.	+	.	ID=GCA000560365_00142_gene;locus_tag=GCA000560365_00142;gene=deoB
contig_1	Pyrodigal	CDS	159814	160992	.	+	0	ID=GCA000560365_00142;Name=phosphopentomutase;locus_tag=GCA000560365_00142;product=phosphopentomutase;Dbxref=GO:0000287,GO:0005737,GO:0005829,GO:0006015,GO:0006018,GO:0008973,GO:0009117,GO:0030145,GO:0043094;gene=deoB;Parent=GCA000560365_00142_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1015,COG:G,RefSeq:WP_000197806.1,SO:0001217,UniParc:UPI00000D773B,UniRef:UniRef100_Q2G227,UniRef:UniRef50_Q8DQD0,UniRef:UniRef90_Q2G227;ec_number=5.4.2.7
contig_1	Pyrodigal	gene	161123	161938	.	-	.	ID=GCA000560365_00143_gene;locus_tag=GCA000560365_00143;gene=phnE
contig_1	Pyrodigal	CDS	161123	161938	.	-	0	ID=GCA000560365_00143;Name=phosphonate ABC transporter%2C permease protein PhnE;locus_tag=GCA000560365_00143;product=phosphonate ABC transporter%2C permease protein PhnE;Dbxref=GO:0005886,GO:0015416,GO:0015716,GO:0055052;gene=phnE;Parent=GCA000560365_00143_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3639,COG:P,KEGG:K02042,RefSeq:WP_000191092.1,SO:0001217,UniParc:UPI00000546F9,UniRef:UniRef100_Q2G225,UniRef:UniRef50_A0A7Z1N8X5,UniRef:UniRef90_A0A2K4ALN9;ec_number=7.3.2.2
contig_1	Pyrodigal	gene	161935	162735	.	-	.	ID=GCA000560365_00144_gene;locus_tag=GCA000560365_00144;gene=phnE
contig_1	Pyrodigal	CDS	161935	162735	.	-	0	ID=GCA000560365_00144;Name=phosphonate ABC transporter%2C permease protein PhnE;locus_tag=GCA000560365_00144;product=phosphonate ABC transporter%2C permease protein PhnE;Dbxref=GO:0005886,GO:0015416,GO:0015716,GO:0055052;gene=phnE;Parent=GCA000560365_00144_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3639,COG:P,KEGG:K02042,RefSeq:WP_001127689.1,SO:0001217,UniParc:UPI00000546F8,UniRef:UniRef100_Q2G1L9,UniRef:UniRef50_E3EAH8,UniRef:UniRef90_A0A0Z4EPE7;ec_number=7.3.2.2
contig_1	Pyrodigal	gene	162737	163510	.	-	.	ID=GCA000560365_00145_gene;locus_tag=GCA000560365_00145;gene=phnC
contig_1	Pyrodigal	CDS	162737	163510	.	-	0	ID=GCA000560365_00145;Name=phosphonate ABC transporter ATP-binding protein;locus_tag=GCA000560365_00145;product=phosphonate ABC transporter ATP-binding protein;Dbxref=GO:0005524,GO:0005886,GO:0015416,GO:0015716,GO:0016020,GO:0016887;gene=phnC;Parent=GCA000560365_00145_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3638,COG:P,RefSeq:WP_000078092.1,SO:0001217,UniParc:UPI00000D77F7,UniRef:UniRef100_Q2G1L8,UniRef:UniRef50_Q2G1L8,UniRef:UniRef90_Q2G1L8;ec_number=7.3.2.2
contig_1	Pyrodigal	gene	163724	164680	.	-	.	ID=GCA000560365_00146_gene;locus_tag=GCA000560365_00146;gene=phnD
contig_1	Pyrodigal	CDS	163724	164680	.	-	0	ID=GCA000560365_00146;Name=Phosphonate ABC transporter phosphate-binding periplasmic component;locus_tag=GCA000560365_00146;product=Phosphonate ABC transporter phosphate-binding periplasmic component;gene=phnD;Parent=GCA000560365_00146_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3221,COG:P,KEGG:K02044,RefSeq:WP_000787672.1,SO:0001217,UniParc:UPI00000546F6,UniRef:UniRef100_Q2G1L7,UniRef:UniRef50_D3EDC2,UniRef:UniRef90_A0A077UPS7
contig_1	Pyrodigal	gene	164909	166453	.	+	.	ID=GCA000560365_00147_gene;locus_tag=GCA000560365_00147
contig_1	Pyrodigal	CDS	164909	166453	.	+	0	ID=GCA000560365_00147;Name=DNA-binding protein;locus_tag=GCA000560365_00147;product=DNA-binding protein;Parent=GCA000560365_00147_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000725596.1,SO:0001217,UniParc:UPI00000546F5,UniRef:UniRef100_Q2G1L6,UniRef:UniRef50_Q2G1L6,UniRef:UniRef90_Q2G1L6
contig_1	Pyrodigal	gene	166504	168039	.	+	.	ID=GCA000560365_00148_gene;locus_tag=GCA000560365_00148;gene=ushA
contig_1	Pyrodigal	CDS	166504	168039	.	+	0	ID=GCA000560365_00148;Name=2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase;locus_tag=GCA000560365_00148;product=2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase;gene=ushA;Parent=GCA000560365_00148_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0737,COG:FV,RefSeq:WP_000065035.1,SO:0001217,UniParc:UPI00004B5A9B,UniRef:UniRef100_Q2G1L5,UniRef:UniRef50_A0A390ZG35,UniRef:UniRef90_A0A390ZG35
contig_1	Pyrodigal	gene	168387	168485	.	-	.	ID=GCA000560365_00149_gene;locus_tag=GCA000560365_00149
contig_1	Pyrodigal	CDS	168387	168485	.	-	0	ID=GCA000560365_00149;Name=hypothetical protein;locus_tag=GCA000560365_00149;product=hypothetical protein;Parent=GCA000560365_00149_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002B22E85,UniRef:UniRef100_A0A1D4MRA9,UniRef:UniRef50_A0A1D4MRA9,UniRef:UniRef90_A0A1D4MRA9
contig_1	Pyrodigal	gene	168699	169184	.	+	.	ID=GCA000560365_00150_gene;locus_tag=GCA000560365_00150
contig_1	Pyrodigal	CDS	168699	169184	.	+	0	ID=GCA000560365_00150;Name=Replication initiation protein%2C putative;locus_tag=GCA000560365_00150;product=Replication initiation protein%2C putative;Parent=GCA000560365_00150_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001550007.1,SO:0001217,UniParc:UPI000069AA36,UniRef:UniRef100_Q2G1L3,UniRef:UniRef50_A0A9N9KMZ1,UniRef:UniRef90_Q2G1L3
contig_1	Pyrodigal	gene	169169	169459	.	+	.	ID=GCA000560365_00151_gene;locus_tag=GCA000560365_00151
contig_1	Pyrodigal	CDS	169169	169459	.	+	0	ID=GCA000560365_00151;Name=Truncated replication initiation protein%2C putative;locus_tag=GCA000560365_00151;product=Truncated replication initiation protein%2C putative;Parent=GCA000560365_00151_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D9BC0,UniRef:UniRef100_Q2G1L2,UniRef:UniRef50_A0A141RL29,UniRef:UniRef90_Q2G1L2
contig_1	Infernal	gene	169819	170087	.	-	.	ID=GCA000560365_00152_gene;locus_tag=GCA000560365_00152;gene=S35
contig_1	Infernal	ncRNA	169819	170087	5.3e-39	-	.	ID=GCA000560365_00152;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000560365_00152;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000560365_00152_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	170436	170657	.	+	.	ID=GCA000560365_00153_gene;locus_tag=GCA000560365_00153;gene=tnp
contig_1	Pyrodigal	CDS	170436	170657	.	+	0	ID=GCA000560365_00153;Name=IS200/IS605 family transposase;locus_tag=GCA000560365_00153;product=IS200/IS605 family transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000560365_00153_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1943,COG:X,RefSeq:WP_001550009.1,SO:0001217,UniParc:UPI00000546EE,UniRef:UniRef100_Q2G1L0,UniRef:UniRef50_E6LCX5,UniRef:UniRef90_A0AAE2ZW92
contig_1	Pyrodigal	gene	171107	173716	.	+	.	ID=GCA000560365_00154_gene;locus_tag=GCA000560365_00154;gene=adhE
contig_1	Pyrodigal	CDS	171107	173716	.	+	0	ID=GCA000560365_00154;Name=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;locus_tag=GCA000560365_00154;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;Dbxref=GO:0004022,GO:0006066,GO:0015976,GO:0016620,GO:0046872;gene=adhE;Parent=GCA000560365_00154_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1454,RefSeq:WP_000955777.1,SO:0001217,UniParc:UPI00004B5A9C,UniRef:UniRef100_Q2G1K9,UniRef:UniRef50_A0A0H2ZM56,UniRef:UniRef90_A0A0U1MVV5;ec_number=1.2.1.10
contig_1	Pyrodigal	gene	174061	174729	.	+	.	ID=GCA000560365_00155_gene;locus_tag=GCA000560365_00155;gene=capA
contig_1	Pyrodigal	CDS	174061	174729	.	+	0	ID=GCA000560365_00155;Name=capsular polysaccharide type 5/8 biosynthesis protein CapA;locus_tag=GCA000560365_00155;product=capsular polysaccharide type 5/8 biosynthesis protein CapA;Dbxref=GO:0000271,GO:0004713,GO:0005351,GO:0005886,GO:0015774;gene=capA;Parent=GCA000560365_00155_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000446300,COG:COG3944,COG:M,RefSeq:WP_000446299.1,SO:0001217,UniParc:UPI00000546EC,UniRef:UniRef100_P95695,UniRef:UniRef50_P72367,UniRef:UniRef90_P72367
contig_1	Pyrodigal	gene	174745	175431	.	+	.	ID=GCA000560365_00156_gene;locus_tag=GCA000560365_00156;gene=cap8B
contig_1	Pyrodigal	CDS	174745	175431	.	+	0	ID=GCA000560365_00156;Name=type 8 capsular polysaccharide synthesis protein Cap8B;locus_tag=GCA000560365_00156;product=type 8 capsular polysaccharide synthesis protein Cap8B;gene=cap8B;Parent=GCA000560365_00156_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000037328,COG:COG0489,COG:D,RefSeq:WP_000037332.1,SO:0001217,UniParc:UPI00000CA9FE,UniRef:UniRef100_Q2G1K7,UniRef:UniRef50_P39851,UniRef:UniRef90_A8YPQ8
contig_1	Pyrodigal	gene	175434	176198	.	+	.	ID=GCA000560365_00157_gene;locus_tag=GCA000560365_00157;gene=cap8C
contig_1	Pyrodigal	CDS	175434	176198	.	+	0	ID=GCA000560365_00157;Name=type 8 capsular polysaccharide synthesis protein Cap8C;locus_tag=GCA000560365_00157;product=type 8 capsular polysaccharide synthesis protein Cap8C;gene=cap8C;Parent=GCA000560365_00157_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000565297,COG:COG4464,COG:T,RefSeq:WP_000565302.1,SO:0001217,UniParc:UPI00000546EA,UniRef:UniRef100_Q2G1K6,UniRef:UniRef50_P72369,UniRef:UniRef90_P72369
contig_1	Pyrodigal	gene	176218	177222	.	+	.	ID=GCA000560365_00158_gene;locus_tag=GCA000560365_00158
contig_1	Pyrodigal	CDS	176218	177222	.	+	0	ID=GCA000560365_00158;Name=nucleoside-diphosphate sugar epimerase/dehydratase;locus_tag=GCA000560365_00158;product=nucleoside-diphosphate sugar epimerase/dehydratase;Parent=GCA000560365_00158_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_UPI000FF5EE58
contig_1	Pyrodigal	gene	177188	178042	.	+	.	ID=GCA000560365_00159_gene;locus_tag=GCA000560365_00159;gene=flaA1;pseudogene=unitary
contig_1	Pyrodigal	CDS	177188	178042	.	+	0	ID=GCA000560365_00159;Name=Polysaccharide biosynthesis protein;locus_tag=GCA000560365_00159;product=Polysaccharide biosynthesis protein;pseudogene=unitary;gene=flaA1;Parent=GCA000560365_00159_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1086,COG:MO,SO:0001217,UniRef:UniRef50_P39853,UniRef:UniRef90_A0AAE8PB03
contig_1	Pyrodigal	gene	178032	179060	.	+	.	ID=GCA000560365_00160_gene;locus_tag=GCA000560365_00160;gene=cap8E
contig_1	Pyrodigal	CDS	178032	179060	.	+	0	ID=GCA000560365_00160;Name=type 8 capsular polysaccharide synthesis protein Cap8E;locus_tag=GCA000560365_00160;product=type 8 capsular polysaccharide synthesis protein Cap8E;gene=cap8E;Parent=GCA000560365_00160_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000459062,COG:COG1086,COG:MO,KEGG:K15894,RefSeq:WP_000459057.1,SO:0001217,UniParc:UPI0000696B88,UniRef:UniRef100_A0A5A8VUN8,UniRef:UniRef50_P95699,UniRef:UniRef90_A0A0Y9S337;ec_number=5.1.3.-
contig_1	Pyrodigal	gene	179073	180182	.	+	.	ID=GCA000560365_00161_gene;locus_tag=GCA000560365_00161;gene=cap8F
contig_1	Pyrodigal	CDS	179073	180182	.	+	0	ID=GCA000560365_00161;Name=type 8 capsular polysaccharide synthesis protein Cap8F;locus_tag=GCA000560365_00161;product=type 8 capsular polysaccharide synthesis protein Cap8F;gene=cap8F;Parent=GCA000560365_00161_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001028293,COG:COG1898,COG:M,KEGG:K19068,RefSeq:WP_001028293.1,SO:0001217,UniParc:UPI00000D9BC5,UniRef:UniRef100_Q2G1K3,UniRef:UniRef50_A0A1V4SI62,UniRef:UniRef90_A0A390ZI88;ec_number=1.1.1.367
contig_1	Pyrodigal	gene	180186	181310	.	+	.	ID=GCA000560365_00162_gene;locus_tag=GCA000560365_00162;gene=cap8G
contig_1	Pyrodigal	CDS	180186	181310	.	+	0	ID=GCA000560365_00162;Name=type 8 capsular polysaccharide synthesis protein Cap8G;locus_tag=GCA000560365_00162;product=type 8 capsular polysaccharide synthesis protein Cap8G;Dbxref=GO:0008761;gene=cap8G;Parent=GCA000560365_00162_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000413169,COG:COG0381,COG:M,KEGG:K24258,RefSeq:WP_000413173.1,SO:0001217,UniParc:UPI0000696B89,UniRef:UniRef100_A0A0E8H824,UniRef:UniRef50_A0A9X2B7Q1,UniRef:UniRef90_A0A077UEL0;ec_number=5.1.3.28
contig_1	Pyrodigal	gene	181313	181939	.	+	.	ID=GCA000560365_00163_gene;locus_tag=GCA000560365_00163;gene=wbbJ
contig_1	Pyrodigal	CDS	181313	181939	.	+	0	ID=GCA000560365_00163;Name=Acetyltransferase;locus_tag=GCA000560365_00163;product=Acetyltransferase;gene=wbbJ;Parent=GCA000560365_00163_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0110,COG:R,RefSeq:WP_001216898.1,SO:0001217,UniParc:UPI00000D472C,UniRef:UniRef100_Q2G1K1,UniRef:UniRef50_A0A2K4AME3,UniRef:UniRef90_A0A2K4AME3
contig_1	Pyrodigal	gene	181944	183053	.	+	.	ID=GCA000560365_00164_gene;locus_tag=GCA000560365_00164;gene=rfaB
contig_1	Pyrodigal	CDS	181944	183053	.	+	0	ID=GCA000560365_00164;Name=Capsular biosynthesis protein;locus_tag=GCA000560365_00164;product=Capsular biosynthesis protein;gene=rfaB;Parent=GCA000560365_00164_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0438,COG:M,RefSeq:WP_001221639.1,SO:0001217,UniParc:UPI00000546E2,UniRef:UniRef100_Q2G1K0,UniRef:UniRef50_D7UYF1,UniRef:UniRef90_A0AAE2ZVF1
contig_1	Pyrodigal	gene	183067	184233	.	+	.	ID=GCA000560365_00165_gene;locus_tag=GCA000560365_00165;gene=rfaL
contig_1	Pyrodigal	CDS	183067	184233	.	+	0	ID=GCA000560365_00165;Name=Capsular polysaccharide synthesis enzyme Cap5J;locus_tag=GCA000560365_00165;product=Capsular polysaccharide synthesis enzyme Cap5J;gene=rfaL;Parent=GCA000560365_00165_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3307,COG:M,RefSeq:WP_000668180.1,SO:0001217,UniParc:UPI00000546E1,UniRef:UniRef100_Q2G1J9,UniRef:UniRef50_A0A391FAD1,UniRef:UniRef90_A0A391FAD1
contig_1	Pyrodigal	gene	184226	185431	.	+	.	ID=GCA000560365_00166_gene;locus_tag=GCA000560365_00166
contig_1	Pyrodigal	CDS	184226	185431	.	+	0	ID=GCA000560365_00166;Name=Cap5K;locus_tag=GCA000560365_00166;product=Cap5K;Parent=GCA000560365_00166_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001085819.1,SO:0001217,UniParc:UPI00004B5A9D,UniRef:UniRef100_Q2G1J8,UniRef:UniRef50_P95704,UniRef:UniRef90_P95704
contig_1	Pyrodigal	gene	185432	186637	.	+	.	ID=GCA000560365_00167_gene;locus_tag=GCA000560365_00167;gene=cap8L
contig_1	Pyrodigal	CDS	185432	186637	.	+	0	ID=GCA000560365_00167;Name=type 8 capsular polysaccharide synthesis protein Cap8L;locus_tag=GCA000560365_00167;product=type 8 capsular polysaccharide synthesis protein Cap8L;gene=cap8L;Parent=GCA000560365_00167_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001291010,COG:COG0438,COG:M,KEGG:K03208,RefSeq:WP_001291022.1,SO:0001217,UniParc:UPI00000546DF,UniRef:UniRef100_Q2G1J7,UniRef:UniRef50_P95705,UniRef:UniRef90_P95705
contig_1	Pyrodigal	gene	186648	187205	.	+	.	ID=GCA000560365_00168_gene;locus_tag=GCA000560365_00168;gene=cap8M
contig_1	Pyrodigal	CDS	186648	187205	.	+	0	ID=GCA000560365_00168;Name=type 8 capsular polysaccharide synthesis protein Cap8M;locus_tag=GCA000560365_00168;product=type 8 capsular polysaccharide synthesis protein Cap8M;gene=cap8M;Parent=GCA000560365_00168_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000825101,COG:COG2148,COG:M,KEGG:K13012,RefSeq:WP_000825098.1,SO:0001217,UniParc:UPI00000522E7,UniRef:UniRef100_Q2G1J6,UniRef:UniRef50_A0A2D7LN21,UniRef:UniRef90_A0A7U7JS51
contig_1	Pyrodigal	gene	187205	188092	.	+	.	ID=GCA000560365_00169_gene;locus_tag=GCA000560365_00169;gene=capN
contig_1	Pyrodigal	CDS	187205	188092	.	+	0	ID=GCA000560365_00169;Name=capsular polysaccharide type 5/8 biosynthesis epimerase CapN;locus_tag=GCA000560365_00169;product=capsular polysaccharide type 5/8 biosynthesis epimerase CapN;gene=capN;Parent=GCA000560365_00169_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001230668,COG:COG0451,COG:M,RefSeq:WP_001230670.1,SO:0001217,UniParc:UPI00000546DD,UniRef:UniRef100_Q2G1J5,UniRef:UniRef50_A0A390B3T4,UniRef:UniRef90_P95707
contig_1	Pyrodigal	gene	188146	189408	.	+	.	ID=GCA000560365_00170_gene;locus_tag=GCA000560365_00170;gene=cap8O
contig_1	Pyrodigal	CDS	188146	189408	.	+	0	ID=GCA000560365_00170;Name=type 8 capsular polysaccharide synthesis protein Cap8O;locus_tag=GCA000560365_00170;product=type 8 capsular polysaccharide synthesis protein Cap8O;gene=cap8O;Parent=GCA000560365_00170_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000779494,COG:COG0677,COG:M,KEGG:K02472,RefSeq:WP_000779497.1,SO:0001217,UniParc:UPI00000546DC,UniRef:UniRef100_Q2G1J4,UniRef:UniRef50_A0A239ZQS7,UniRef:UniRef90_A0A9N8IHJ7;ec_number=1.1.1.336
contig_1	Pyrodigal	gene	189485	190630	.	+	.	ID=GCA000560365_00171_gene;locus_tag=GCA000560365_00171;gene=cap8P
contig_1	Pyrodigal	CDS	189485	190630	.	+	0	ID=GCA000560365_00171;Name=type 8 capsular polysaccharide synthesis protein Cap8P;locus_tag=GCA000560365_00171;product=type 8 capsular polysaccharide synthesis protein Cap8P;Dbxref=GO:0008761;gene=cap8P;Parent=GCA000560365_00171_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000723452,COG:COG0381,COG:M,RefSeq:WP_000723454.1,SO:0001217,UniParc:UPI00000522AD,UniRef:UniRef100_A0A0H2WXI3,UniRef:UniRef50_A0A847MAJ7,UniRef:UniRef90_A0AAE8PBV8;ec_number=5.1.3.14
contig_1	Pyrodigal	gene	190695	191021	.	-	.	ID=GCA000560365_00172_gene;locus_tag=GCA000560365_00172;gene=isdI
contig_1	Pyrodigal	CDS	190695	191021	.	-	0	ID=GCA000560365_00172;Name=staphylobilin-forming heme oxygenase IsdI;locus_tag=GCA000560365_00172;product=staphylobilin-forming heme oxygenase IsdI;Dbxref=GO:0004392,GO:0005506,GO:0005737,GO:0020037,GO:0033212,GO:0042167;gene=isdI;Parent=GCA000560365_00172_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000480603,COG:COG2329,COG:H,KEGG:K07145,RefSeq:WP_000480603.1,SO:0001217,UniParc:UPI00000D77A8,UniRef:UniRef100_Q2G1J2,UniRef:UniRef50_Q2FZE2,UniRef:UniRef90_Q2G1J2;ec_number=1.14.99.48
contig_1	Pyrodigal	gene	191028	191411	.	-	.	ID=GCA000560365_00173_gene;locus_tag=GCA000560365_00173;gene=ybaN
contig_1	Pyrodigal	CDS	191028	191411	.	-	0	ID=GCA000560365_00173;Name=DUF454 domain-containing protein;locus_tag=GCA000560365_00173;product=DUF454 domain-containing protein;gene=ybaN;Parent=GCA000560365_00173_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2832,COG:S,RefSeq:WP_001237004.1,SO:0001217,UniParc:UPI00000546D9,UniRef:UniRef100_Q2G1J1,UniRef:UniRef50_Q2G1J1,UniRef:UniRef90_Q2G1J1
contig_1	Pyrodigal	gene	191838	193325	.	+	.	ID=GCA000560365_00174_gene;locus_tag=GCA000560365_00174;gene=aldA
contig_1	Pyrodigal	CDS	191838	193325	.	+	0	ID=GCA000560365_00174;Name=Putative aldehyde dehydrogenase AldA;locus_tag=GCA000560365_00174;product=Putative aldehyde dehydrogenase AldA;Dbxref=GO:0004029;gene=aldA;Parent=GCA000560365_00174_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1012,COG:I,RefSeq:WP_000290400.1,SO:0001217,UniParc:UPI00000546D8,UniRef:UniRef100_Q2G1J0,UniRef:UniRef50_Q2G1J0,UniRef:UniRef90_Q2G1J0;ec_number=1.2.1.3
contig_1	Pyrodigal	gene	193971	194930	.	+	.	ID=GCA000560365_00175_gene;locus_tag=GCA000560365_00175;gene=czcD
contig_1	Pyrodigal	CDS	193971	194930	.	+	0	ID=GCA000560365_00175;Name=Cation transporter;locus_tag=GCA000560365_00175;product=Cation transporter;gene=czcD;Parent=GCA000560365_00175_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1230,COG:P,RefSeq:WP_001013484.1,SO:0001217,UniParc:UPI00000546D7,UniRef:UniRef100_Q2G1I9,UniRef:UniRef50_Q2G1I9,UniRef:UniRef90_Q2G1I9
contig_1	Pyrodigal	gene	194992	195195	.	-	.	ID=GCA000560365_00176_gene;locus_tag=GCA000560365_00176
contig_1	Pyrodigal	CDS	194992	195195	.	-	0	ID=GCA000560365_00176;Name=hypothetical protein;locus_tag=GCA000560365_00176;product=hypothetical protein;Parent=GCA000560365_00176_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000356963.1,SO:0001217,UniParc:UPI00000546D6,UniRef:UniRef100_Q2G1I8,UniRef:UniRef50_Q2G1I8,UniRef:UniRef90_Q2G1I8
contig_1	Pyrodigal	gene	195374	195886	.	+	.	ID=GCA000560365_00177_gene;locus_tag=GCA000560365_00177
contig_1	Pyrodigal	CDS	195374	195886	.	+	0	ID=GCA000560365_00177;Name=DUF4242 domain-containing protein;locus_tag=GCA000560365_00177;product=DUF4242 domain-containing protein;Parent=GCA000560365_00177_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000171919.1,SO:0001217,UniParc:UPI00000546D4,UniRef:UniRef100_Q2G1I7,UniRef:UniRef50_A0A0A8JHF4,UniRef:UniRef90_Q2G1I7
contig_1	Pyrodigal	gene	196228	196968	.	+	.	ID=GCA000560365_00178_gene;locus_tag=GCA000560365_00178;gene=tauB
contig_1	Pyrodigal	CDS	196228	196968	.	+	0	ID=GCA000560365_00178;Name=ABC transporter ATP-binding protein;locus_tag=GCA000560365_00178;product=ABC transporter ATP-binding protein;gene=tauB;Parent=GCA000560365_00178_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1116,COG:P,RefSeq:WP_000590850.1,SO:0001217,UniParc:UPI0000696B8B,UniRef:UniRef100_A0A5A8W1A5,UniRef:UniRef50_A0A0U1MVC7,UniRef:UniRef90_A0A0U1MVC7
contig_1	Pyrodigal	gene	196982	197956	.	+	.	ID=GCA000560365_00179_gene;locus_tag=GCA000560365_00179;gene=tauA
contig_1	Pyrodigal	CDS	196982	197956	.	+	0	ID=GCA000560365_00179;Name=ABC transporter substrate-binding protein;locus_tag=GCA000560365_00179;product=ABC transporter substrate-binding protein;gene=tauA;Parent=GCA000560365_00179_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0715,COG:P,RefSeq:WP_000826685.1,SO:0001217,UniParc:UPI00003DAF88,UniRef:UniRef100_Q2G1I5,UniRef:UniRef50_A0A380C0S7,UniRef:UniRef90_Q2G1I5
contig_1	Pyrodigal	gene	197953	198714	.	+	.	ID=GCA000560365_00180_gene;locus_tag=GCA000560365_00180;gene=tauC
contig_1	Pyrodigal	CDS	197953	198714	.	+	0	ID=GCA000560365_00180;Name=ABC transmembrane type-1 domain-containing protein;locus_tag=GCA000560365_00180;product=ABC transmembrane type-1 domain-containing protein;gene=tauC;Parent=GCA000560365_00180_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0600,COG:P,RefSeq:WP_000197958.1,SO:0001217,UniParc:UPI00000546D1,UniRef:UniRef100_Q2G1I4,UniRef:UniRef50_Q2G1I4,UniRef:UniRef90_Q2G1I4
contig_1	Pyrodigal	gene	198724	199758	.	+	.	ID=GCA000560365_00181_gene;locus_tag=GCA000560365_00181;gene=caiA
contig_1	Pyrodigal	CDS	198724	199758	.	+	0	ID=GCA000560365_00181;Name=Acyl-CoA dehydrogenase;locus_tag=GCA000560365_00181;product=Acyl-CoA dehydrogenase;gene=caiA;Parent=GCA000560365_00181_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1960,COG:I,SO:0001217,UniParc:UPI0001AE9CEE,UniRef:UniRef100_A0A0D6GIG3,UniRef:UniRef50_A0A0E1XC01,UniRef:UniRef90_A0A0E1XC01
contig_1	Pyrodigal	gene	199975	200334	.	+	.	ID=GCA000560365_00182_gene;locus_tag=GCA000560365_00182;gene=mpsC
contig_1	Pyrodigal	CDS	199975	200334	.	+	0	ID=GCA000560365_00182;Name=Na+-translocating membrane putative-generating system MpsC domain-containing protein;locus_tag=GCA000560365_00182;product=Na+-translocating membrane putative-generating system MpsC domain-containing protein;gene=mpsC;Parent=GCA000560365_00182_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG5609,RefSeq:WP_001092004.1,SO:0001217,UniParc:UPI00000D9BD5,UniRef:UniRef100_Q2G1I2,UniRef:UniRef50_Q2G1I2,UniRef:UniRef90_Q2G1I2
contig_1	Pyrodigal	gene	200507	201532	.	+	.	ID=GCA000560365_00183_gene;locus_tag=GCA000560365_00183;gene=ldhA
contig_1	Pyrodigal	CDS	200507	201532	.	+	0	ID=GCA000560365_00183;Name=NAD-dependent formate dehydrogenase;locus_tag=GCA000560365_00183;product=NAD-dependent formate dehydrogenase;Dbxref=GO:0008863,GO:0051287;gene=ldhA;Parent=GCA000560365_00183_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CHR,COG:COG1052,RefSeq:WP_000706137.1,SO:0001217,UniParc:UPI00004B5AA0,UniRef:UniRef100_Q2G1I1,UniRef:UniRef50_Q2G1I1,UniRef:UniRef90_Q2G1I1
contig_1	Pyrodigal	gene	201918	203168	.	+	.	ID=GCA000560365_00184_gene;locus_tag=GCA000560365_00184
contig_1	Pyrodigal	CDS	201918	203168	.	+	0	ID=GCA000560365_00184;Name=Major facilitator superfamily (MFS) profile domain-containing protein;locus_tag=GCA000560365_00184;product=Major facilitator superfamily (MFS) profile domain-containing protein;Parent=GCA000560365_00184_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K08152,RefSeq:WP_000826862.1,SO:0001217,UniParc:UPI00000546CD,UniRef:UniRef100_Q2G1I0,UniRef:UniRef50_Q2G1I0,UniRef:UniRef90_Q2G1I0
contig_1	Pyrodigal	gene	203615	210790	.	+	.	ID=GCA000560365_00185_gene;locus_tag=GCA000560365_00185;gene=ausA
contig_1	Pyrodigal	CDS	203615	210790	.	+	0	ID=GCA000560365_00185;Name=aureusimine non-ribosomal peptide synthetase AusA;locus_tag=GCA000560365_00185;product=aureusimine non-ribosomal peptide synthetase AusA;gene=ausA;Parent=GCA000560365_00185_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3320,COG:Q,RefSeq:WP_000605282.1,SO:0001217,UniParc:UPI0000696B8C,UniRef:UniRef100_A0A380EB68,UniRef:UniRef50_A0A4U9TAP6,UniRef:UniRef90_A0AAE2ZS18
contig_1	Pyrodigal	gene	210803	211447	.	+	.	ID=GCA000560365_00186_gene;locus_tag=GCA000560365_00186;gene=ausB
contig_1	Pyrodigal	CDS	210803	211447	.	+	0	ID=GCA000560365_00186;Name=aureusimine biosynthesis 4'-phosphopantetheinyl transferase AusB;locus_tag=GCA000560365_00186;product=aureusimine biosynthesis 4'-phosphopantetheinyl transferase AusB;Dbxref=GO:0016780;gene=ausB;Parent=GCA000560365_00186_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2091,COG:H,RefSeq:WP_000215724.1,SO:0001217,UniParc:UPI00000546CB,UniRef:UniRef100_Q2G1H8,UniRef:UniRef50_Q2G1H8,UniRef:UniRef90_Q2G1H8;ec_number=2.7.8.-
contig_1	Pyrodigal	gene	211775	212269	.	-	.	ID=GCA000560365_00187_gene;locus_tag=GCA000560365_00187;gene=yagU
contig_1	Pyrodigal	CDS	211775	212269	.	-	0	ID=GCA000560365_00187;Name=DUF1440 domain-containing protein;locus_tag=GCA000560365_00187;product=DUF1440 domain-containing protein;gene=yagU;Parent=GCA000560365_00187_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3477,COG:S,KEGG:K08996,RefSeq:WP_000166932.1,SO:0001217,UniParc:UPI00000D9BD8,UniRef:UniRef100_Q2G1H7,UniRef:UniRef50_Q2G1H7,UniRef:UniRef90_Q2G1H7
contig_1	Pyrodigal	gene	212524	213288	.	-	.	ID=GCA000560365_00188_gene;locus_tag=GCA000560365_00188;gene=argB
contig_1	Pyrodigal	CDS	212524	213288	.	-	0	ID=GCA000560365_00188;Name=Acetylglutamate kinase;locus_tag=GCA000560365_00188;product=Acetylglutamate kinase;Dbxref=GO:0003991,GO:0005524,GO:0005737,GO:0006526,GO:0042450;gene=argB;Parent=GCA000560365_00188_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0548,COG:E,RefSeq:WP_000668894.1,SO:0001217,UniParc:UPI00000546C9,UniRef:UniRef100_Q2G1H6,UniRef:UniRef50_Q2G1H6,UniRef:UniRef90_Q2G1H6;ec_number=2.7.2.8
contig_1	Pyrodigal	gene	213304	214545	.	-	.	ID=GCA000560365_00189_gene;locus_tag=GCA000560365_00189;gene=argJ
contig_1	Pyrodigal	CDS	213304	214545	.	-	0	ID=GCA000560365_00189;Name=bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ;locus_tag=GCA000560365_00189;product=bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ;Dbxref=GO:0004042,GO:0004358,GO:0005737,GO:0006526,GO:0006592;gene=argJ;Parent=GCA000560365_00189_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1364,COG:E,KEGG:K00620,RefSeq:WP_000682611.1,SO:0001217,UniParc:UPI00000546C8,UniRef:UniRef100_Q5HJJ0,UniRef:UniRef50_P63575,UniRef:UniRef90_P63575;ec_number=2.3.1.35
contig_1	Pyrodigal	gene	214557	215591	.	-	.	ID=GCA000560365_00190_gene;locus_tag=GCA000560365_00190;gene=argC
contig_1	Pyrodigal	CDS	214557	215591	.	-	0	ID=GCA000560365_00190;Name=N-acetyl-gamma-glutamyl-phosphate reductase;locus_tag=GCA000560365_00190;product=N-acetyl-gamma-glutamyl-phosphate reductase;Dbxref=GO:0003942,GO:0005737,GO:0006526,GO:0006592,GO:0051287,GO:0070401;gene=argC;Parent=GCA000560365_00190_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0002,COG:E,SO:0001217,UniParc:UPI00000546C7,UniRef:UniRef100_A0A0H3K5P8,UniRef:UniRef50_Q6GKC2,UniRef:UniRef90_Q6GKC2;ec_number=1.2.1.38
contig_1	Infernal	gene	215149	215340	.	+	.	ID=GCA000560365_00191_gene;locus_tag=GCA000560365_00191;gene=sau-53
contig_1	Infernal	ncRNA	215149	215340	1.2e-35	+	.	ID=GCA000560365_00191;Name=Staphylococcus sRNA sau-53;locus_tag=GCA000560365_00191;product=Staphylococcus sRNA sau-53;Dbxref=RFAM:RF02392;Parent=GCA000560365_00191_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02392
contig_1	Pyrodigal	gene	215627	216811	.	-	.	ID=GCA000560365_00192_gene;locus_tag=GCA000560365_00192;gene=rocD
contig_1	Pyrodigal	CDS	215627	216811	.	-	0	ID=GCA000560365_00192;Name=ornithine--oxo-acid transaminase;locus_tag=GCA000560365_00192;product=ornithine--oxo-acid transaminase;Dbxref=GO:0004587,GO:0005737,GO:0006526,GO:0030170,GO:0042802,GO:0055129;gene=rocD;Parent=GCA000560365_00192_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4992,COG:E,KEGG:K00819,RefSeq:WP_001084436.1,SO:0001217,UniParc:UPI0000125EA7,UniRef:UniRef100_Q5HJI8,UniRef:UniRef50_P60295,UniRef:UniRef90_P60295;ec_number=2.6.1.13
contig_1	Pyrodigal	gene	217064	218419	.	-	.	ID=GCA000560365_00193_gene;locus_tag=GCA000560365_00193;gene=brnQ
contig_1	Pyrodigal	CDS	217064	218419	.	-	0	ID=GCA000560365_00193;Name=branched-chain amino acid transport system II carrier protein;locus_tag=GCA000560365_00193;product=branched-chain amino acid transport system II carrier protein;Dbxref=GO:0015658,GO:0015803,GO:0016020;gene=brnQ;Parent=GCA000560365_00193_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1114,COG:E,KEGG:K03311,RefSeq:WP_000728173.1,SO:0001217,UniParc:UPI00000546C5,UniRef:UniRef100_Q2G1H2,UniRef:UniRef50_A0A133CF62,UniRef:UniRef90_A0A380EB78
contig_1	Pyrodigal	gene	218695	219252	.	-	.	ID=GCA000560365_00194_gene;locus_tag=GCA000560365_00194;gene=pncA
contig_1	Pyrodigal	CDS	218695	219252	.	-	0	ID=GCA000560365_00194;Name=Isochorismatase-like domain-containing protein;locus_tag=GCA000560365_00194;product=Isochorismatase-like domain-containing protein;gene=pncA;Parent=GCA000560365_00194_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1335,COG:HR,RefSeq:WP_000606890.1,SO:0001217,UniParc:UPI00003B1A3C,UniRef:UniRef100_A0A0D6GIX1,UniRef:UniRef50_Q2G1H1,UniRef:UniRef90_Q2G1H1
contig_1	Pyrodigal	gene	219319	220959	.	-	.	ID=GCA000560365_00195_gene;locus_tag=GCA000560365_00195;gene=pDC1
contig_1	Pyrodigal	CDS	219319	220959	.	-	0	ID=GCA000560365_00195;Name=Alpha-keto acid decarboxylase family protein;locus_tag=GCA000560365_00195;product=Alpha-keto acid decarboxylase family protein;gene=pDC1;Parent=GCA000560365_00195_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3961,COG:GHR,KEGG:K27601,RefSeq:WP_000813555.1,SO:0001217,UniParc:UPI00004B5AA2,UniRef:UniRef100_Q2G1H0,UniRef:UniRef50_A0A239YDI9,UniRef:UniRef90_A0A0Y9AAE9;ec_number=4.1.1.72
contig_1	Pyrodigal	gene	221233	223278	.	-	.	ID=GCA000560365_00196_gene;locus_tag=GCA000560365_00196;gene=ptsG
contig_1	Pyrodigal	CDS	221233	223278	.	-	0	ID=GCA000560365_00196;Name=PTS system glucose-specific EIICBA component;locus_tag=GCA000560365_00196;product=PTS system glucose-specific EIICBA component;Dbxref=GO:0005886,GO:0008982,GO:0009401,GO:0016301,GO:0055056,GO:0090563,GO:1904659;gene=ptsG;Parent=GCA000560365_00196_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2190,COG:G,RefSeq:WP_001227724.1,SO:0001217,UniParc:UPI00000D9BDC,UniRef:UniRef100_Q2G1G8,UniRef:UniRef50_P20166,UniRef:UniRef90_Q2G1G8;ec_number=2.7.1.199
contig_1	Pyrodigal	gene	223864	224919	.	+	.	ID=GCA000560365_00197_gene;locus_tag=GCA000560365_00197;gene=mupG
contig_1	Pyrodigal	CDS	223864	224919	.	+	0	ID=GCA000560365_00197;Name=6-phospho-N-acetylmuramidase;locus_tag=GCA000560365_00197;product=6-phospho-N-acetylmuramidase;Dbxref=GO:0005737,GO:0009254,GO:0016798;gene=mupG;Parent=GCA000560365_00197_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3589,COG:M,KEGG:K09963,RefSeq:WP_000145555.1,SO:0001217,UniParc:UPI00004B5AA4,UniRef:UniRef100_A0A0H2XHV5,UniRef:UniRef50_A0A0H2XHV5,UniRef:UniRef90_A0A0H2XHV5;ec_number=3.2.1.-
contig_1	Pyrodigal	gene	224919	225815	.	+	.	ID=GCA000560365_00198_gene;locus_tag=GCA000560365_00198;gene=murQ
contig_1	Pyrodigal	CDS	224919	225815	.	+	0	ID=GCA000560365_00198;Name=N-acetylmuramic acid 6-phosphate etherase;locus_tag=GCA000560365_00198;product=N-acetylmuramic acid 6-phosphate etherase;Dbxref=GO:0009254,GO:0016803,GO:0016835,GO:0046348,GO:0097173,GO:0097367;gene=murQ;Parent=GCA000560365_00198_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2103,COG:M,KEGG:K07106,RefSeq:WP_000432017.1,SO:0001217,UniParc:UPI0000696B8D,UniRef:UniRef100_Q2G1G6,UniRef:UniRef50_Q2G1G6,UniRef:UniRef90_Q2G1G6;ec_number=4.2.1.126
contig_1	Pyrodigal	gene	225827	227281	.	+	.	ID=GCA000560365_00199_gene;locus_tag=GCA000560365_00199;gene=murP
contig_1	Pyrodigal	CDS	225827	227281	.	+	0	ID=GCA000560365_00199;Name=PTS system MurNAc-GlcNAc-specific EIIBC component;locus_tag=GCA000560365_00199;product=PTS system MurNAc-GlcNAc-specific EIIBC component;Dbxref=GO:0005886,GO:0008982,GO:0009254,GO:0009401,GO:0016301,GO:0090588;gene=murP;Parent=GCA000560365_00199_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1264,COG:G,RefSeq:WP_000159750.1,SO:0001217,UniParc:UPI00000522AF,UniRef:UniRef100_Q2G1G5,UniRef:UniRef50_Q4L8H5,UniRef:UniRef90_Q2G1G5
contig_1	Pyrodigal	gene	227281	228159	.	+	.	ID=GCA000560365_00200_gene;locus_tag=GCA000560365_00200;gene=rpiR
contig_1	Pyrodigal	CDS	227281	228159	.	+	0	ID=GCA000560365_00200;Name=MurR/RpiR family transcriptional regulator;locus_tag=GCA000560365_00200;product=MurR/RpiR family transcriptional regulator;gene=rpiR;Parent=GCA000560365_00200_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1737,COG:K,SO:0001217,UniParc:UPI00000546BD,UniRef:UniRef100_Q2G1G4,UniRef:UniRef50_Q2FVV2,UniRef:UniRef90_Q2G1G4
contig_1	Pyrodigal	gene	228353	228634	.	-	.	ID=GCA000560365_00201_gene;locus_tag=GCA000560365_00201
contig_1	Pyrodigal	CDS	228353	228634	.	-	0	ID=GCA000560365_00201;Name=hypothetical protein;locus_tag=GCA000560365_00201;product=hypothetical protein;Parent=GCA000560365_00201_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001550030.1,SO:0001217,UniParc:UPI00000D777D,UniRef:UniRef100_Q2G1G3,UniRef:UniRef50_Q2G1G3,UniRef:UniRef90_Q2G1G3
contig_1	Pyrodigal	gene	228847	231636	.	+	.	ID=GCA000560365_00202_gene;locus_tag=GCA000560365_00202;gene=hsdR
contig_1	Pyrodigal	CDS	228847	231636	.	+	0	ID=GCA000560365_00202;Name=Type I restriction enzyme SauMW2ORF169P endonuclease subunit;locus_tag=GCA000560365_00202;product=Type I restriction enzyme SauMW2ORF169P endonuclease subunit;Dbxref=GO:0003677,GO:0005524,GO:0009035,GO:0009307;gene=hsdR;Parent=GCA000560365_00202_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0610,COG:V,KEGG:K01153,RefSeq:WP_000331347.1,SO:0001217,UniParc:UPI00000546BC,UniRef:UniRef100_Q5HJH8,UniRef:UniRef50_Q4A127,UniRef:UniRef90_Q99X26;ec_number=3.1.21.3
contig_1	Pyrodigal	gene	231841	232683	.	+	.	ID=GCA000560365_00203_gene;locus_tag=GCA000560365_00203
contig_1	Pyrodigal	CDS	231841	232683	.	+	0	ID=GCA000560365_00203;Name=Sce7726 family protein;locus_tag=GCA000560365_00203;product=Sce7726 family protein;Parent=GCA000560365_00203_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000370334.1,SO:0001217,UniParc:UPI00000BC1B8,UniRef:UniRef100_Q2G1G1,UniRef:UniRef50_Q2G1G1,UniRef:UniRef90_Q2G1G1
contig_1	Pyrodigal	gene	232685	233608	.	+	.	ID=GCA000560365_00204_gene;locus_tag=GCA000560365_00204
contig_1	Pyrodigal	CDS	232685	233608	.	+	0	ID=GCA000560365_00204;Name=Sce7725 family protein;locus_tag=GCA000560365_00204;product=Sce7725 family protein;Parent=GCA000560365_00204_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000291761.1,SO:0001217,UniParc:UPI00000546BA,UniRef:UniRef100_Q2G1G0,UniRef:UniRef50_Q2G1G0,UniRef:UniRef90_Q2G1G0
contig_1	Pyrodigal	gene	233595	234707	.	+	.	ID=GCA000560365_00205_gene;locus_tag=GCA000560365_00205
contig_1	Pyrodigal	CDS	233595	234707	.	+	0	ID=GCA000560365_00205;Name=RES domain-containing protein;locus_tag=GCA000560365_00205;product=RES domain-containing protein;Parent=GCA000560365_00205_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000686457.1,SO:0001217,UniParc:UPI00004B5AA5,UniRef:UniRef100_A0A0E7YMP8,UniRef:UniRef50_Q2G1F9,UniRef:UniRef90_Q2G1F9
contig_1	Pyrodigal	gene	234972	236564	.	-	.	ID=GCA000560365_00206_gene;locus_tag=GCA000560365_00206;gene=cntF
contig_1	Pyrodigal	CDS	234972	236564	.	-	0	ID=GCA000560365_00206;Name=staphylopine uptake ABC transporter ATP-binding protein CntF;locus_tag=GCA000560365_00206;product=staphylopine uptake ABC transporter ATP-binding protein CntF;gene=cntF;Parent=GCA000560365_00206_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4172,COG:Q,RefSeq:WP_000067349.1,SO:0001217,UniParc:UPI00000546B8,UniRef:UniRef100_Q2G1F8,UniRef:UniRef50_A0A0Y9RYS1,UniRef:UniRef90_A0A0Y9RYS1
contig_1	Pyrodigal	gene	236566	237999	.	+	.	ID=GCA000560365_00207_gene;locus_tag=GCA000560365_00207;gene=dppB
contig_1	Pyrodigal	CDS	236566	237999	.	+	0	ID=GCA000560365_00207;Name=ABC transmembrane type-1 domain-containing protein;locus_tag=GCA000560365_00207;product=ABC transmembrane type-1 domain-containing protein;gene=dppB;Parent=GCA000560365_00207_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0601,COG:EP,SO:0001217,UniParc:UPI0002CAF6AE,UniRef:UniRef100_Q2G1F7,UniRef:UniRef50_Q2G1F7,UniRef:UniRef90_Q2G1F7
contig_1	Pyrodigal	gene	238005	239168	.	+	.	ID=GCA000560365_00208_gene;locus_tag=GCA000560365_00208;gene=dppC
contig_1	Pyrodigal	CDS	238005	239168	.	+	0	ID=GCA000560365_00208;Name=ABC transporter permease;locus_tag=GCA000560365_00208;product=ABC transporter permease;gene=dppC;Parent=GCA000560365_00208_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1173,COG:EP,RefSeq:WP_000057899.1,SO:0001217,UniParc:UPI00000522E8,UniRef:UniRef100_Q2G1F6,UniRef:UniRef50_A0A0D0SFB5,UniRef:UniRef90_A0A390VWI1
contig_1	Pyrodigal	gene	239185	240960	.	+	.	ID=GCA000560365_00209_gene;locus_tag=GCA000560365_00209;gene=oppA
contig_1	Pyrodigal	CDS	239185	240960	.	+	0	ID=GCA000560365_00209;Name=Solute-binding protein family 5 domain-containing protein;locus_tag=GCA000560365_00209;product=Solute-binding protein family 5 domain-containing protein;gene=oppA;Parent=GCA000560365_00209_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4166,COG:E,RefSeq:WP_000720804.1,SO:0001217,UniParc:UPI00000D9BE7,UniRef:UniRef100_Q2G1F5,UniRef:UniRef50_Q2G1F5,UniRef:UniRef90_Q2G1F5
contig_1	Pyrodigal	gene	240998	243004	.	+	.	ID=GCA000560365_00210_gene;locus_tag=GCA000560365_00210;gene=ggt
contig_1	Pyrodigal	CDS	240998	243004	.	+	0	ID=GCA000560365_00210;Name=gamma-glutamyltransferase;locus_tag=GCA000560365_00210;product=gamma-glutamyltransferase;Dbxref=GO:0006750,GO:0006751,GO:0036374;gene=ggt;Parent=GCA000560365_00210_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0405,COG:E,RefSeq:WP_000236397.1,SO:0001217,UniParc:UPI0000696B90,UniRef:UniRef100_A0A0E8H648,UniRef:UniRef50_A0A151A3J0,UniRef:UniRef90_A0A0U1MVT3;ec_number=2.3.2.2
contig_1	Pyrodigal	gene	243302	244075	.	-	.	ID=GCA000560365_00211_gene;locus_tag=GCA000560365_00211
contig_1	Pyrodigal	CDS	243302	244075	.	-	0	ID=GCA000560365_00211;Name=putative protein SAUSA300_0205;locus_tag=GCA000560365_00211;product=putative protein SAUSA300_0205;Dbxref=GO:0005886;Parent=GCA000560365_00211_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000643615.1,SO:0001217,UniParc:UPI00004B5AA7,UniRef:UniRef100_Q5HJG9,UniRef:UniRef50_Q2G1F3,UniRef:UniRef90_Q2G1F3
contig_1	Pyrodigal	gene	244265	244891	.	-	.	ID=GCA000560365_00212_gene;locus_tag=GCA000560365_00212;gene=azoR
contig_1	Pyrodigal	CDS	244265	244891	.	-	0	ID=GCA000560365_00212;Name=FMN-dependent NADH:quinone oxidoreductase;locus_tag=GCA000560365_00212;product=FMN-dependent NADH:quinone oxidoreductase;Dbxref=GO:0009055,GO:0010181,GO:0016652,GO:0016655;gene=azoR;Parent=GCA000560365_00212_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1182,KEGG:K01118,RefSeq:WP_001151451.1,SO:0001217,UniParc:UPI000012530F,UniRef:UniRef100_Q2G1F2,UniRef:UniRef50_O32224,UniRef:UniRef90_Q2YV20;ec_number=1.6.5.-
contig_1	Pyrodigal	gene	245100	245678	.	+	.	ID=GCA000560365_00213_gene;locus_tag=GCA000560365_00213
contig_1	Pyrodigal	CDS	245100	245678	.	+	0	ID=GCA000560365_00213;Name=lysostaphin;locus_tag=GCA000560365_00213;product=lysostaphin;Parent=GCA000560365_00213_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000166917.1,SO:0001217,UniParc:UPI00004B5AA8,UniRef:UniRef100_Q2G1F1,UniRef:UniRef50_A0AAP8TTY0,UniRef:UniRef90_A0A181EW64
contig_1	Pyrodigal	gene	246061	247158	.	+	.	ID=GCA000560365_00214_gene;locus_tag=GCA000560365_00214;gene=malK
contig_1	Pyrodigal	CDS	246061	247158	.	+	0	ID=GCA000560365_00214;Name=Maltose/maltodextrin ABC superfamily ATP binding cassette transporter%2C ABC protein;locus_tag=GCA000560365_00214;product=Maltose/maltodextrin ABC superfamily ATP binding cassette transporter%2C ABC protein;gene=malK;Parent=GCA000560365_00214_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3839,COG:G,RefSeq:WP_000818914.1,SO:0001217,UniParc:UPI00000546AE,UniRef:UniRef100_Q2G1F0,UniRef:UniRef50_A0A3A3AX25,UniRef:UniRef90_A0A3A3AX25
contig_1	Pyrodigal	gene	247171	248442	.	+	.	ID=GCA000560365_00215_gene;locus_tag=GCA000560365_00215;gene=malE
contig_1	Pyrodigal	CDS	247171	248442	.	+	0	ID=GCA000560365_00215;Name=Maltodextrin-binding protein;locus_tag=GCA000560365_00215;product=Maltodextrin-binding protein;gene=malE;Parent=GCA000560365_00215_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2182,COG:G,RefSeq:WP_000034961.1,SO:0001217,UniParc:UPI00000522B0,UniRef:UniRef100_Q2G1E9,UniRef:UniRef50_A0A380G462,UniRef:UniRef90_Q2G1E9
contig_1	Pyrodigal	gene	248445	249713	.	+	.	ID=GCA000560365_00216_gene;locus_tag=GCA000560365_00216;gene=ugpA
contig_1	Pyrodigal	CDS	248445	249713	.	+	0	ID=GCA000560365_00216;Name=Maltose/maltodextrin transport system permease protein;locus_tag=GCA000560365_00216;product=Maltose/maltodextrin transport system permease protein;gene=ugpA;Parent=GCA000560365_00216_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1175,COG:G,RefSeq:WP_000166888.1,SO:0001217,UniParc:UPI00000546AD,UniRef:UniRef100_Q2G1E8,UniRef:UniRef50_A0A0C2H8L9,UniRef:UniRef90_A0A0C2H8L9
contig_1	Pyrodigal	gene	249715	250554	.	+	.	ID=GCA000560365_00217_gene;locus_tag=GCA000560365_00217;gene=malG
contig_1	Pyrodigal	CDS	249715	250554	.	+	0	ID=GCA000560365_00217;Name=Maltose ABC transporter%2C permease protein;locus_tag=GCA000560365_00217;product=Maltose ABC transporter%2C permease protein;gene=malG;Parent=GCA000560365_00217_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3833,COG:G,RefSeq:WP_000162661.1,SO:0001217,UniParc:UPI0000052279,UniRef:UniRef100_Q2G1E7,UniRef:UniRef50_H3NDB5,UniRef:UniRef90_Q2G1E7
contig_1	Pyrodigal	gene	250628	251704	.	+	.	ID=GCA000560365_00218_gene;locus_tag=GCA000560365_00218;gene=mviM
contig_1	Pyrodigal	CDS	250628	251704	.	+	0	ID=GCA000560365_00218;Name=NADH-dependent dehydrogenase;locus_tag=GCA000560365_00218;product=NADH-dependent dehydrogenase;gene=mviM;Parent=GCA000560365_00218_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0673,COG:R,RefSeq:WP_000153466.1,SO:0001217,UniParc:UPI00004B5AA9,UniRef:UniRef100_Q2G1E6,UniRef:UniRef50_A0A660A233,UniRef:UniRef90_A0A660A233
contig_1	Pyrodigal	gene	251729	252769	.	+	.	ID=GCA000560365_00219_gene;locus_tag=GCA000560365_00219;gene=mviM
contig_1	Pyrodigal	CDS	251729	252769	.	+	0	ID=GCA000560365_00219;Name=Gfo/Idh/MocA family oxidoreductase;locus_tag=GCA000560365_00219;product=Gfo/Idh/MocA family oxidoreductase;gene=mviM;Parent=GCA000560365_00219_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0673,COG:R,RefSeq:WP_000163809.1,SO:0001217,UniParc:UPI00000546AA,UniRef:UniRef100_Q2G1E5,UniRef:UniRef50_A0A2Y2IEY6,UniRef:UniRef90_A0A2Y2IEY6
contig_1	Pyrodigal	gene	252824	253792	.	+	.	ID=GCA000560365_00220_gene;locus_tag=GCA000560365_00220;gene=ycjR
contig_1	Pyrodigal	CDS	252824	253792	.	+	0	ID=GCA000560365_00220;Name=Xylose isomerase-like TIM barrel domain-containing protein;locus_tag=GCA000560365_00220;product=Xylose isomerase-like TIM barrel domain-containing protein;gene=ycjR;Parent=GCA000560365_00220_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1082,COG:G,RefSeq:WP_000690419.1,SO:0001217,UniParc:UPI00000D9BEC,UniRef:UniRef100_Q2G1E4,UniRef:UniRef50_K8EEE9,UniRef:UniRef90_Q2G1E4
contig_1	Pyrodigal	gene	254154	254648	.	-	.	ID=GCA000560365_00221_gene;locus_tag=GCA000560365_00221;gene=ypbQ
contig_1	Pyrodigal	CDS	254154	254648	.	-	0	ID=GCA000560365_00221;Name=Isoprenylcysteine carboxyl methyltransferase family protein;locus_tag=GCA000560365_00221;product=Isoprenylcysteine carboxyl methyltransferase family protein;gene=ypbQ;Parent=GCA000560365_00221_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1755,COG:S,RefSeq:WP_000603755.1,SO:0001217,UniParc:UPI00000D7830,UniRef:UniRef100_Q2G1E3,UniRef:UniRef50_Q2G1E3,UniRef:UniRef90_Q2G1E3
contig_1	Pyrodigal	gene	254881	256260	.	+	.	ID=GCA000560365_00222_gene;locus_tag=GCA000560365_00222;gene=uhpT
contig_1	Pyrodigal	CDS	254881	256260	.	+	0	ID=GCA000560365_00222;Name=hexose phosphate transporter UhpT;locus_tag=GCA000560365_00222;product=hexose phosphate transporter UhpT;Dbxref=GO:0022857,GO:0055085;gene=uhpT;Parent=GCA000560365_00222_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2271,COG:G,KEGG:K07784,RefSeq:WP_001008722.1,SO:0001217,UniParc:UPI00000D772F,UniRef:UniRef100_Q2G1E2,UniRef:UniRef50_A0A9D7FSA6,UniRef:UniRef90_Q2G1E2
contig_1	Pyrodigal	gene	256619	257377	.	-	.	ID=GCA000560365_00223_gene;locus_tag=GCA000560365_00223;gene=hptR
contig_1	Pyrodigal	CDS	256619	257377	.	-	0	ID=GCA000560365_00223;Name=Transcriptional regulatory protein HptR;locus_tag=GCA000560365_00223;product=Transcriptional regulatory protein HptR;Dbxref=GO:0000160,GO:0003700,GO:0005737,GO:0043565;gene=hptR;Parent=GCA000560365_00223_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4753,COG:TK,KEGG:K07720,RefSeq:WP_000477521.1,SO:0001217,UniParc:UPI00000546A7,UniRef:UniRef100_Q2G1E1,UniRef:UniRef50_Q2G1E1,UniRef:UniRef90_Q2G1E1
contig_1	Pyrodigal	gene	257370	258926	.	-	.	ID=GCA000560365_00224_gene;locus_tag=GCA000560365_00224;gene=hptS
contig_1	Pyrodigal	CDS	257370	258926	.	-	0	ID=GCA000560365_00224;Name=Sensor protein kinase HptS;locus_tag=GCA000560365_00224;product=Sensor protein kinase HptS;Dbxref=GO:0000155,GO:0005524,GO:0005886;gene=hptS;Parent=GCA000560365_00224_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2972,COG:T,KEGG:K25212,RefSeq:WP_000127982.1,SO:0001217,UniParc:UPI00000546A6,UniRef:UniRef100_Q2G1E0,UniRef:UniRef50_Q2G1E0,UniRef:UniRef90_Q2G1E0;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	258923	259891	.	-	.	ID=GCA000560365_00225_gene;locus_tag=GCA000560365_00225;gene=afuA
contig_1	Pyrodigal	CDS	258923	259891	.	-	0	ID=GCA000560365_00225;Name=Lipoprotein%2C putative;locus_tag=GCA000560365_00225;product=Lipoprotein%2C putative;gene=afuA;Parent=GCA000560365_00225_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1840,COG:GH,KEGG:K25211,RefSeq:WP_000837105.1,SO:0001217,UniParc:UPI00000546A5,UniRef:UniRef100_Q2G1D9,UniRef:UniRef50_S2XG35,UniRef:UniRef90_Q2G1D9
contig_1	Pyrodigal	gene	260479	262728	.	+	.	ID=GCA000560365_00226_gene;locus_tag=GCA000560365_00226;gene=pflB
contig_1	Pyrodigal	CDS	260479	262728	.	+	0	ID=GCA000560365_00226;Name=formate C-acetyltransferase;locus_tag=GCA000560365_00226;product=formate C-acetyltransferase;Dbxref=GO:0005737,GO:0005829,GO:0005975,GO:0006006,GO:0008861;gene=pflB;Parent=GCA000560365_00226_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1882,KEGG:K00656,RefSeq:WP_000894660.1,SO:0001217,UniParc:UPI00000D789B,UniRef:UniRef100_Q2G1D8,UniRef:UniRef50_Q2G1D8,UniRef:UniRef90_Q2G1D8;ec_number=2.3.1.54
contig_1	Pyrodigal	gene	262751	263506	.	+	.	ID=GCA000560365_00227_gene;locus_tag=GCA000560365_00227;gene=pflA
contig_1	Pyrodigal	CDS	262751	263506	.	+	0	ID=GCA000560365_00227;Name=pyruvate formate-lyase-activating protein;locus_tag=GCA000560365_00227;product=pyruvate formate-lyase-activating protein;Dbxref=GO:0005737,GO:0006006,GO:0043365,GO:0046872,GO:0051539;gene=pflA;Parent=GCA000560365_00227_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1180,COG:O,RefSeq:WP_000911657.1,SO:0001217,UniParc:UPI00000546A2,UniRef:UniRef100_Q2G1D7,UniRef:UniRef50_P0A442,UniRef:UniRef90_Q2G1D7;ec_number=1.97.1.4
contig_1	Pyrodigal	gene	263842	265605	.	+	.	ID=GCA000560365_00228_gene;locus_tag=GCA000560365_00228;gene=ugpQ1
contig_1	Pyrodigal	CDS	263842	265605	.	+	0	ID=GCA000560365_00228;Name=GP-PDE domain-containing protein;locus_tag=GCA000560365_00228;product=GP-PDE domain-containing protein;gene=ugpQ1;Parent=GCA000560365_00228_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4781,COG:I,KEGG:K01126,RefSeq:WP_000822608.1,SO:0001217,UniParc:UPI00004B5AAC,UniRef:UniRef100_Q2G1D5,UniRef:UniRef50_Q2G1D5,UniRef:UniRef90_Q2G1D5;ec_number=3.1.4.46
contig_1	Pyrodigal	gene	265769	266113	.	-	.	ID=GCA000560365_00229_gene;locus_tag=GCA000560365_00229
contig_1	Pyrodigal	CDS	265769	266113	.	-	0	ID=GCA000560365_00229;Name=Staphylococcal complement inhibitor;locus_tag=GCA000560365_00229;product=Staphylococcal complement inhibitor;Parent=GCA000560365_00229_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K14199,RefSeq:WP_000211597.1,SO:0001217,UniParc:UPI00000546A0,UniRef:UniRef100_Q2G1D4,UniRef:UniRef50_Q4W8K4,UniRef:UniRef90_Q4W8K4
contig_1	Pyrodigal	gene	266303	268132	.	+	.	ID=GCA000560365_00230_gene;locus_tag=GCA000560365_00230;gene=coa
contig_1	Pyrodigal	CDS	266303	268132	.	+	0	ID=GCA000560365_00230;Name=staphylocoagulase;locus_tag=GCA000560365_00230;product=staphylocoagulase;gene=coa;Parent=GCA000560365_00230_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000744073.1,SO:0001217,UniParc:UPI0000696B91,UniRef:UniRef100_C4B834,UniRef:UniRef50_P17855,UniRef:UniRef90_C4B834
contig_1	Pyrodigal	gene	268735	269919	.	-	.	ID=GCA000560365_00231_gene;locus_tag=GCA000560365_00231;gene=paaJ
contig_1	Pyrodigal	CDS	268735	269919	.	-	0	ID=GCA000560365_00231;Name=putative acetyl-CoA acyltransferase;locus_tag=GCA000560365_00231;product=putative acetyl-CoA acyltransferase;gene=paaJ;Parent=GCA000560365_00231_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0183,COG:I,RefSeq:WP_001154618.1,SO:0001217,UniParc:UPI00004B5AAE,UniRef:UniRef100_Q93SM1,UniRef:UniRef50_O32177,UniRef:UniRef90_Q2G1D0
contig_1	Pyrodigal	gene	269949	272210	.	-	.	ID=GCA000560365_00232_gene;locus_tag=GCA000560365_00232;gene=fadB
contig_1	Pyrodigal	CDS	269949	272210	.	-	0	ID=GCA000560365_00232;Name=enoyl-CoA hydratase;locus_tag=GCA000560365_00232;product=enoyl-CoA hydratase;gene=fadB;Parent=GCA000560365_00232_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1250,COG:I,RefSeq:WP_000154514.1,SO:0001217,UniParc:UPI000005469D,UniRef:UniRef100_Q2G1C9,UniRef:UniRef50_Q2G1C9,UniRef:UniRef90_Q2G1C9
contig_1	Pyrodigal	gene	272396	273607	.	-	.	ID=GCA000560365_00233_gene;locus_tag=GCA000560365_00233;gene=caiA
contig_1	Pyrodigal	CDS	272396	273607	.	-	0	ID=GCA000560365_00233;Name=Glutaryl-CoA dehydrogenase;locus_tag=GCA000560365_00233;product=Glutaryl-CoA dehydrogenase;gene=caiA;Parent=GCA000560365_00233_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1960,COG:I,RefSeq:WP_000142189.1,SO:0001217,UniParc:UPI00003B136C,UniRef:UniRef100_Q2G1C8,UniRef:UniRef50_A0A2S6D7L1,UniRef:UniRef90_A0A2S6D7L1
contig_1	Pyrodigal	gene	273719	275224	.	-	.	ID=GCA000560365_00234_gene;locus_tag=GCA000560365_00234;gene=menE
contig_1	Pyrodigal	CDS	273719	275224	.	-	0	ID=GCA000560365_00234;Name=Putative long chain fatty acid-CoA ligase VraA;locus_tag=GCA000560365_00234;product=Putative long chain fatty acid-CoA ligase VraA;gene=menE;Parent=GCA000560365_00234_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0318,COG:I,RefSeq:WP_001008401.1,SO:0001217,UniParc:UPI00000AF2FC,UniRef:UniRef100_Q2G1C7,UniRef:UniRef50_A0AAP7IER6,UniRef:UniRef90_A0A390WIJ0
contig_1	Pyrodigal	gene	275250	276812	.	-	.	ID=GCA000560365_00235_gene;locus_tag=GCA000560365_00235;gene=ydiF
contig_1	Pyrodigal	CDS	275250	276812	.	-	0	ID=GCA000560365_00235;Name=Acetyl-CoA/acetoacetyl-CoA transferase;locus_tag=GCA000560365_00235;product=Acetyl-CoA/acetoacetyl-CoA transferase;gene=ydiF;Parent=GCA000560365_00235_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4670,COG:I,SO:0001217,UniParc:UPI0001698E14,UniRef:UniRef100_A0A1S5YIC4,UniRef:UniRef50_A0A9N8IHE7,UniRef:UniRef90_A0A9N8IHE7
contig_1	Pyrodigal	gene	277181	278410	.	+	.	ID=GCA000560365_00236_gene;locus_tag=GCA000560365_00236;gene=prsW
contig_1	Pyrodigal	CDS	277181	278410	.	+	0	ID=GCA000560365_00236;Name=Protease PrsW;locus_tag=GCA000560365_00236;product=Protease PrsW;gene=prsW;Parent=GCA000560365_00236_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2339,COG:T,SO:0001217,UniParc:UPI00015FD742,UniRef:UniRef100_Q2G1C5,UniRef:UniRef50_S2YE33,UniRef:UniRef90_A0A5S9C588
contig_1	Pyrodigal	gene	278724	280199	.	-	.	ID=GCA000560365_00237_gene;locus_tag=GCA000560365_00237;gene=nikA
contig_1	Pyrodigal	CDS	278724	280199	.	-	0	ID=GCA000560365_00237;Name=nickel ABC transporter substrate-binding protein;locus_tag=GCA000560365_00237;product=nickel ABC transporter substrate-binding protein;Dbxref=GO:0015675,GO:0015833,GO:0042597,GO:0043190,GO:0140359,GO:1904680;gene=nikA;Parent=GCA000560365_00237_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0747,COG:E,RefSeq:WP_000669653.1,SO:0001217,UniParc:UPI0000054698,UniRef:UniRef100_Q2G2P5,UniRef:UniRef50_Q2G2P5,UniRef:UniRef90_Q2G2P5
contig_1	Pyrodigal	gene	280397	280753	.	-	.	ID=GCA000560365_00238_gene;locus_tag=GCA000560365_00238;gene=yeaO
contig_1	Pyrodigal	CDS	280397	280753	.	-	0	ID=GCA000560365_00238;Name=DUF488 domain-containing protein;locus_tag=GCA000560365_00238;product=DUF488 domain-containing protein;gene=yeaO;Parent=GCA000560365_00238_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3189,COG:S,RefSeq:WP_000215216.1,SO:0001217,UniParc:UPI00000D7851,UniRef:UniRef100_Q2G2P4,UniRef:UniRef50_Q4A0G8,UniRef:UniRef90_Q2G2P4
contig_1	Pyrodigal	gene	280910	281083	.	-	.	ID=GCA000560365_00239_gene;locus_tag=GCA000560365_00239
contig_1	Pyrodigal	CDS	280910	281083	.	-	0	ID=GCA000560365_00239;Name=hypothetical protein;locus_tag=GCA000560365_00239;product=hypothetical protein;Parent=GCA000560365_00239_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000773989.1,SO:0001217,UniParc:UPI0000054696,UniRef:UniRef100_Q2G2P3,UniRef:UniRef50_Q2G2P3,UniRef:UniRef90_Q2G2P3
contig_1	Pyrodigal	gene	281109	282254	.	-	.	ID=GCA000560365_00240_gene;locus_tag=GCA000560365_00240;gene=fpr
contig_1	Pyrodigal	CDS	281109	282254	.	-	0	ID=GCA000560365_00240;Name=nitric oxide dioxygenase;locus_tag=GCA000560365_00240;product=nitric oxide dioxygenase;gene=fpr;Parent=GCA000560365_00240_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1018,KEGG:K05916,RefSeq:WP_000954810.1,SO:0001217,UniParc:UPI0000054695,UniRef:UniRef100_Q2G2P2,UniRef:UniRef50_Q2G2P2,UniRef:UniRef90_Q2G2P2;ec_number=1.14.12.17
contig_1	Pyrodigal	gene	282827	283780	.	+	.	ID=GCA000560365_00241_gene;locus_tag=GCA000560365_00241;gene=ldh1
contig_1	Pyrodigal	CDS	282827	283780	.	+	0	ID=GCA000560365_00241;Name=L-lactate dehydrogenase;locus_tag=GCA000560365_00241;product=L-lactate dehydrogenase;Dbxref=GO:0004459,GO:0005737,GO:0006089,GO:0006096;gene=ldh1;Parent=GCA000560365_00241_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0039,RefSeq:WP_001031882.1,SO:0001217,UniParc:UPI0000054693,UniRef:UniRef100_Q2G218,UniRef:UniRef50_Q2G218,UniRef:UniRef90_Q2G218;ec_number=1.1.1.27
contig_1	Pyrodigal	gene	284100	285629	.	-	.	ID=GCA000560365_00242_gene;locus_tag=GCA000560365_00242;gene=ptsG2
contig_1	Pyrodigal	CDS	284100	285629	.	-	0	ID=GCA000560365_00242;Name=PTS glucose transporter subunit IIB;locus_tag=GCA000560365_00242;product=PTS glucose transporter subunit IIB;gene=ptsG2;Parent=GCA000560365_00242_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1264,COG:G,RefSeq:WP_000838204.1,SO:0001217,UniParc:UPI00000D9BFA,UniRef:UniRef100_Q2G219,UniRef:UniRef50_A0A0G9G6Y5,UniRef:UniRef90_A0A2S6D7K1
contig_1	Pyrodigal	gene	285991	286926	.	+	.	ID=GCA000560365_00243_gene;locus_tag=GCA000560365_00243;gene=uRH1
contig_1	Pyrodigal	CDS	285991	286926	.	+	0	ID=GCA000560365_00243;Name=Nucleoside hydrolase;locus_tag=GCA000560365_00243;product=Nucleoside hydrolase;gene=uRH1;Parent=GCA000560365_00243_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1957,COG:F,RefSeq:WP_000823215.1,SO:0001217,UniParc:UPI0000054690,UniRef:UniRef100_Q2G217,UniRef:UniRef50_A0A389XQD2,UniRef:UniRef90_A0A389XQD2
contig_1	Pyrodigal	gene	287265	289361	.	+	.	ID=GCA000560365_00244_gene;locus_tag=GCA000560365_00244;gene=bglG
contig_1	Pyrodigal	CDS	287265	289361	.	+	0	ID=GCA000560365_00244;Name=PTS system mannitol (Cryptic)-specific transporter subunit IIA;locus_tag=GCA000560365_00244;product=PTS system mannitol (Cryptic)-specific transporter subunit IIA;gene=bglG;Parent=GCA000560365_00244_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3711,COG:K,RefSeq:WP_001012747.1,SO:0001217,UniParc:UPI000005468D,UniRef:UniRef100_Q2G2B8,UniRef:UniRef50_A0A0Z0QCU8,UniRef:UniRef90_A0A0Z0QCU8
contig_1	Pyrodigal	gene	289346	289813	.	+	.	ID=GCA000560365_00245_gene;locus_tag=GCA000560365_00245;gene=ptsN
contig_1	Pyrodigal	CDS	289346	289813	.	+	0	ID=GCA000560365_00245;Name=PTS sugar transporter subunit IIA;locus_tag=GCA000560365_00245;product=PTS sugar transporter subunit IIA;gene=ptsN;Parent=GCA000560365_00245_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1762,COG:GT,RefSeq:WP_000531476.1,SO:0001217,UniParc:UPI000005468C,UniRef:UniRef100_Q2G2B7,UniRef:UniRef50_A0A380G592,UniRef:UniRef90_A0A2S6DBD2
contig_1	Pyrodigal	gene	289836	290114	.	+	.	ID=GCA000560365_00246_gene;locus_tag=GCA000560365_00246;gene=sgaB
contig_1	Pyrodigal	CDS	289836	290114	.	+	0	ID=GCA000560365_00246;Name=PTS system galactitol-specific transporter subunit IIB;locus_tag=GCA000560365_00246;product=PTS system galactitol-specific transporter subunit IIB;gene=sgaB;Parent=GCA000560365_00246_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3414,COG:G,RefSeq:WP_000815795.1,SO:0001217,UniParc:UPI00000D765E,UniRef:UniRef100_Q2G2B6,UniRef:UniRef50_Q9KGB5,UniRef:UniRef90_A0A239YB06
contig_1	Pyrodigal	gene	290341	291600	.	+	.	ID=GCA000560365_00247_gene;locus_tag=GCA000560365_00247;gene=sgcC
contig_1	Pyrodigal	CDS	290341	291600	.	+	0	ID=GCA000560365_00247;Name=PTS galactitol transporter subunit IIC;locus_tag=GCA000560365_00247;product=PTS galactitol transporter subunit IIC;gene=sgcC;Parent=GCA000560365_00247_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3775,COG:G,KEGG:K02775,RefSeq:WP_000120104.1,SO:0001217,UniParc:UPI000005468A,UniRef:UniRef100_Q2G2C8,UniRef:UniRef50_A0A2Y1NYM9,UniRef:UniRef90_A0A2Y1NYM9
contig_1	Pyrodigal	gene	291618	292673	.	+	.	ID=GCA000560365_00248_gene;locus_tag=GCA000560365_00248;gene=tdh
contig_1	Pyrodigal	CDS	291618	292673	.	+	0	ID=GCA000560365_00248;Name=Sorbitol dehydrogenase;locus_tag=GCA000560365_00248;product=Sorbitol dehydrogenase;gene=tdh;Parent=GCA000560365_00248_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1063,COG:ER,RefSeq:WP_000646207.1,SO:0001217,UniParc:UPI0001B8384B,UniRef:UniRef100_A0A2C9TWF1,UniRef:UniRef50_Q9Z9U1,UniRef:UniRef90_A0A2I7Y3H3
contig_1	Pyrodigal	gene	292675	292821	.	+	.	ID=GCA000560365_00249_gene;locus_tag=GCA000560365_00249
contig_1	Pyrodigal	CDS	292675	292821	.	+	0	ID=GCA000560365_00249;Name=hypothetical protein;locus_tag=GCA000560365_00249;product=hypothetical protein;Parent=GCA000560365_00249_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000230358.1,SO:0001217,UniParc:UPI0000054688,UniRef:UniRef100_Q2G2C6,UniRef:UniRef50_Q2G2C6,UniRef:UniRef90_Q2G2C6
contig_1	Pyrodigal	gene	292845	293888	.	+	.	ID=GCA000560365_00250_gene;locus_tag=GCA000560365_00250;gene=tdh
contig_1	Pyrodigal	CDS	292845	293888	.	+	0	ID=GCA000560365_00250;Name=Enoyl reductase (ER) domain-containing protein;locus_tag=GCA000560365_00250;product=Enoyl reductase (ER) domain-containing protein;gene=tdh;Parent=GCA000560365_00250_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1063,COG:ER,RefSeq:WP_000645604.1,SO:0001217,UniParc:UPI00004B5AB4,UniRef:UniRef100_Q2G2C5,UniRef:UniRef50_A0A9X8RLC9,UniRef:UniRef90_Q2G2C5
contig_1	Pyrodigal	gene	294416	295132	.	+	.	ID=GCA000560365_00251_gene;locus_tag=GCA000560365_00251;gene=tarI2
contig_1	Pyrodigal	CDS	294416	295132	.	+	0	ID=GCA000560365_00251;Name=Ribitol-5-phosphate cytidylyltransferase 2;locus_tag=GCA000560365_00251;product=Ribitol-5-phosphate cytidylyltransferase 2;Dbxref=GO:0008299,GO:0047349,GO:0050518,GO:0071555,GO:1902012;gene=tarI2;Parent=GCA000560365_00251_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1211,COG:I,RefSeq:WP_000638475.1,SO:0001217,UniParc:UPI00000CAC55,UniRef:UniRef100_Q2G2C4,UniRef:UniRef50_Q2G2C4,UniRef:UniRef90_Q2G2C4;ec_number=2.7.7.40
contig_1	Pyrodigal	gene	295125	296150	.	+	.	ID=GCA000560365_00252_gene;locus_tag=GCA000560365_00252;gene=tarJ'
contig_1	Pyrodigal	CDS	295125	296150	.	+	0	ID=GCA000560365_00252;Name=Ribulose-5-phosphate reductase 2;locus_tag=GCA000560365_00252;product=Ribulose-5-phosphate reductase 2;Dbxref=GO:0008270,GO:0050256,GO:0071555,GO:1902012;gene=tarJ';Parent=GCA000560365_00252_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1063,COG:ER,KEGG:K05352,RefSeq:WP_000610189.1,SO:0001217,UniParc:UPI00004B5AB5,UniRef:UniRef100_Q2G1C4,UniRef:UniRef50_Q2G1B9,UniRef:UniRef90_Q2G1C4;ec_number=1.1.1.405
contig_1	Pyrodigal	gene	296172	297866	.	+	.	ID=GCA000560365_00253_gene;locus_tag=GCA000560365_00253;gene=tarL
contig_1	Pyrodigal	CDS	296172	297866	.	+	0	ID=GCA000560365_00253;Name=teichoic acid ribitol-phosphate polymerase TarL;locus_tag=GCA000560365_00253;product=teichoic acid ribitol-phosphate polymerase TarL;Dbxref=GO:0005886,GO:0019350,GO:0047355,GO:0047356,GO:0071555;gene=tarL;Parent=GCA000560365_00253_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1887,COG:MI,RefSeq:WP_000167985.1,SO:0001217,UniParc:UPI0000054684,UniRef:UniRef100_Q2G1C2,UniRef:UniRef50_Q2G1B8,UniRef:UniRef90_Q2G1C2;ec_number=2.7.8.14
contig_1	Pyrodigal	gene	298294	299463	.	+	.	ID=GCA000560365_00254_gene;locus_tag=GCA000560365_00254;gene=tarF
contig_1	Pyrodigal	CDS	298294	299463	.	+	0	ID=GCA000560365_00254;Name=teichoic acid glycerol-phosphate transferase TarF;locus_tag=GCA000560365_00254;product=teichoic acid glycerol-phosphate transferase TarF;Dbxref=GO:0005886,GO:0019350,GO:0047355,GO:0071555;gene=tarF;Parent=GCA000560365_00254_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1887,COG:MI,RefSeq:WP_000594815.1,SO:0001217,UniParc:UPI00003D0D84,UniRef:UniRef100_Q2G1C1,UniRef:UniRef50_Q2G1C1,UniRef:UniRef90_Q2G1C1;ec_number=2.7.8.45
contig_1	Pyrodigal	gene	299739	300455	.	+	.	ID=GCA000560365_00255_gene;locus_tag=GCA000560365_00255;gene=tarI1
contig_1	Pyrodigal	CDS	299739	300455	.	+	0	ID=GCA000560365_00255;Name=Ribitol-5-phosphate cytidylyltransferase 1;locus_tag=GCA000560365_00255;product=Ribitol-5-phosphate cytidylyltransferase 1;Dbxref=GO:0008299,GO:0047349,GO:0050518,GO:0071555,GO:1902012;gene=tarI1;Parent=GCA000560365_00255_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1211,COG:I,RefSeq:WP_000872486.1,SO:0001217,UniParc:UPI0000054682,UniRef:UniRef100_Q2G1C0,UniRef:UniRef50_Q2G2C4,UniRef:UniRef90_Q2G1C0;ec_number=2.7.7.40
contig_1	Pyrodigal	gene	300448	301473	.	+	.	ID=GCA000560365_00256_gene;locus_tag=GCA000560365_00256;gene=tarJ
contig_1	Pyrodigal	CDS	300448	301473	.	+	0	ID=GCA000560365_00256;Name=Ribulose-5-phosphate reductase 1;locus_tag=GCA000560365_00256;product=Ribulose-5-phosphate reductase 1;Dbxref=GO:0008270,GO:0050256,GO:0071555,GO:1902012;gene=tarJ;Parent=GCA000560365_00256_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1063,COG:ER,KEGG:K05352,RefSeq:WP_000610203.1,SO:0001217,UniParc:UPI00000D9C01,UniRef:UniRef100_Q2G1B9,UniRef:UniRef50_Q2G1B9,UniRef:UniRef90_Q2G1B9;ec_number=1.1.1.405
contig_1	Pyrodigal	gene	301495	303183	.	+	.	ID=GCA000560365_00257_gene;locus_tag=GCA000560365_00257;gene=tarL
contig_1	Pyrodigal	CDS	301495	303183	.	+	0	ID=GCA000560365_00257;Name=teichoic acid ribitol-phosphate polymerase TarL;locus_tag=GCA000560365_00257;product=teichoic acid ribitol-phosphate polymerase TarL;Dbxref=GO:0005886,GO:0019350,GO:0047355,GO:0047356,GO:0071555;gene=tarL;Parent=GCA000560365_00257_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1887,COG:MI,RefSeq:WP_000240920.1,SO:0001217,UniParc:UPI00000D789A,UniRef:UniRef100_Q2G1B8,UniRef:UniRef50_Q2G1B8,UniRef:UniRef90_Q2G1B8;ec_number=2.7.8.14
contig_1	Pyrodigal	gene	303216	304940	.	+	.	ID=GCA000560365_00258_gene;locus_tag=GCA000560365_00258;gene=tarS
contig_1	Pyrodigal	CDS	303216	304940	.	+	0	ID=GCA000560365_00258;Name=poly(ribitol-phosphate) beta-N-acetylglucosaminyltransferase;locus_tag=GCA000560365_00258;product=poly(ribitol-phosphate) beta-N-acetylglucosaminyltransferase;Dbxref=GO:0016757,GO:0019350,GO:0046677,GO:0046872,GO:0071555;gene=tarS;Parent=GCA000560365_00258_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000975351,COG:COG0463,COG:M,RefSeq:WP_000975357.1,SO:0001217,UniParc:UPI000005467F,UniRef:UniRef100_Q2G1B7,UniRef:UniRef50_A0A0H3JPC6,UniRef:UniRef90_A0A0H3JPC6;ec_number=2.4.1.355
contig_1	Pyrodigal	gene	305080	305754	.	+	.	ID=GCA000560365_00259_gene;locus_tag=GCA000560365_00259;gene=scdA
contig_1	Pyrodigal	CDS	305080	305754	.	+	0	ID=GCA000560365_00259;Name=iron-sulfur cluster repair di-iron protein ScdA;locus_tag=GCA000560365_00259;product=iron-sulfur cluster repair di-iron protein ScdA;Dbxref=GO:0005737,GO:0006979,GO:0030091,GO:0046872,GO:0051409;gene=scdA;Parent=GCA000560365_00259_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2846,COG:O,RefSeq:WP_000608826.1,SO:0001217,UniParc:UPI00004B5AB7,UniRef:UniRef100_P72360,UniRef:UniRef50_P72360,UniRef:UniRef90_P72360
contig_1	Pyrodigal	gene	306001	307755	.	+	.	ID=GCA000560365_00260_gene;locus_tag=GCA000560365_00260;gene=lytS
contig_1	Pyrodigal	CDS	306001	307755	.	+	0	ID=GCA000560365_00260;Name=Sensor histidine kinase/phosphatase LytS;locus_tag=GCA000560365_00260;product=Sensor histidine kinase/phosphatase LytS;Dbxref=GO:0000155,GO:0005524,GO:0005886,GO:0016787,GO:0071555;gene=lytS;Parent=GCA000560365_00260_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3275,COG:T,KEGG:K07704,RefSeq:WP_000950281.1,SO:0001217,UniParc:UPI00000D775C,UniRef:UniRef100_Q53705,UniRef:UniRef50_Q53705,UniRef:UniRef90_Q53705;ec_number=3.1.3.-
contig_1	Pyrodigal	gene	307758	308498	.	+	.	ID=GCA000560365_00261_gene;locus_tag=GCA000560365_00261;gene=lytR
contig_1	Pyrodigal	CDS	307758	308498	.	+	0	ID=GCA000560365_00261;Name=response regulator transcription factor LytR;locus_tag=GCA000560365_00261;product=response regulator transcription factor LytR;Dbxref=GO:0000156,GO:0003677,GO:0005737;gene=lytR;Parent=GCA000560365_00261_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3279,COG:KT,RefSeq:WP_000645452.1,SO:0001217,UniParc:UPI000005467B,UniRef:UniRef100_P60611,UniRef:UniRef50_P60611,UniRef:UniRef90_P60611
contig_1	Pyrodigal	gene	308617	309054	.	+	.	ID=GCA000560365_00262_gene;locus_tag=GCA000560365_00262;gene=lrgA
contig_1	Pyrodigal	CDS	308617	309054	.	+	0	ID=GCA000560365_00262;Name=antiholin-like murein hydrolase modulator LrgA;locus_tag=GCA000560365_00262;product=antiholin-like murein hydrolase modulator LrgA;Dbxref=GO:0005886,GO:0012501,GO:0019835,GO:0031640;gene=lrgA;Parent=GCA000560365_00262_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001792906,COG:COG1380,COG:R,KEGG:K05338,SO:0001217,UniParc:UPI00000CABD5,UniRef:UniRef100_P60649,UniRef:UniRef50_P72358,UniRef:UniRef90_P72358
contig_1	Pyrodigal	gene	309047	309748	.	+	.	ID=GCA000560365_00263_gene;locus_tag=GCA000560365_00263;gene=lrgB
contig_1	Pyrodigal	CDS	309047	309748	.	+	0	ID=GCA000560365_00263;Name=antiholin-like protein LrgB;locus_tag=GCA000560365_00263;product=antiholin-like protein LrgB;Dbxref=GO:0005886,GO:0012501,GO:0019835,GO:0031640;gene=lrgB;Parent=GCA000560365_00263_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1346,COG:M,KEGG:K05339,RefSeq:WP_000607067.1,SO:0001217,UniParc:UPI0000054679,UniRef:UniRef100_P60643,UniRef:UniRef50_P60643,UniRef:UniRef90_P60643
contig_1	Pyrodigal	gene	309856	310560	.	-	.	ID=GCA000560365_00264_gene;locus_tag=GCA000560365_00264;gene=mngR
contig_1	Pyrodigal	CDS	309856	310560	.	-	0	ID=GCA000560365_00264;Name=HTH gntR-type domain-containing protein;locus_tag=GCA000560365_00264;product=HTH gntR-type domain-containing protein;gene=mngR;Parent=GCA000560365_00264_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2188,COG:K,KEGG:K03489,RefSeq:WP_000922329.1,SO:0001217,UniParc:UPI00004B5AB8,UniRef:UniRef100_Q2G1B1,UniRef:UniRef50_Q2G1B1,UniRef:UniRef90_Q2G1B1
contig_1	Pyrodigal	gene	310709	311500	.	+	.	ID=GCA000560365_00265_gene;locus_tag=GCA000560365_00265;gene=nagE
contig_1	Pyrodigal	CDS	310709	311500	.	+	0	ID=GCA000560365_00265;Name=PTS system glucose-specific EIIA component;locus_tag=GCA000560365_00265;product=PTS system glucose-specific EIIA component;gene=nagE;Parent=GCA000560365_00265_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2190,COG:G,RefSeq:WP_000066937.1,SO:0001217,UniParc:UPI0000696B97,UniRef:UniRef100_A0A1S6AFM4,UniRef:UniRef50_A0A389V698,UniRef:UniRef90_A0A389V698
contig_1	Pyrodigal	gene	311516	312952	.	+	.	ID=GCA000560365_00266_gene;locus_tag=GCA000560365_00266;gene=bglB
contig_1	Pyrodigal	CDS	311516	312952	.	+	0	ID=GCA000560365_00266;Name=6-phospho-beta-glucosidase%2C putative;locus_tag=GCA000560365_00266;product=6-phospho-beta-glucosidase%2C putative;gene=bglB;Parent=GCA000560365_00266_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2723,COG:G,RefSeq:WP_000163988.1,SO:0001217,UniParc:UPI0000054676,UniRef:UniRef100_Q2G1A9,UniRef:UniRef50_Q46829,UniRef:UniRef90_Q2G1A9
contig_1	Infernal	gene	312945	313189	.	-	.	ID=GCA000560365_00267_gene;locus_tag=GCA000560365_00267;gene=S35
contig_1	Infernal	ncRNA	312945	313189	9.7e-17	-	.	ID=GCA000560365_00267;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000560365_00267;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000560365_00267_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	313386	314147	.	-	.	ID=GCA000560365_00268_gene;locus_tag=GCA000560365_00268;gene=ubiE
contig_1	Pyrodigal	CDS	313386	314147	.	-	0	ID=GCA000560365_00268;Name=SAM-dependent methyltransferase;locus_tag=GCA000560365_00268;product=SAM-dependent methyltransferase;gene=ubiE;Parent=GCA000560365_00268_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2226,COG:HJ,RefSeq:WP_000031268.1,SO:0001217,UniParc:UPI0000054675,UniRef:UniRef100_Q2G1A8,UniRef:UniRef50_A0A131JTX0,UniRef:UniRef90_A0A131JTX0
contig_1	Pyrodigal	gene	314398	315312	.	-	.	ID=GCA000560365_00269_gene;locus_tag=GCA000560365_00269;gene=rbsK
contig_1	Pyrodigal	CDS	314398	315312	.	-	0	ID=GCA000560365_00269;Name=ribokinase;locus_tag=GCA000560365_00269;product=ribokinase;Dbxref=GO:0004747,GO:0005524,GO:0005829,GO:0006014,GO:0019303,GO:0046872;gene=rbsK;Parent=GCA000560365_00269_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0524,COG:G,KEGG:K00852,RefSeq:WP_000182751.1,SO:0001217,UniParc:UPI0000054674,UniRef:UniRef100_A0A0H2WZY4,UniRef:UniRef50_A0A0H2WZY4,UniRef:UniRef90_A0A0H2WZY4;ec_number=2.7.1.15
contig_1	Pyrodigal	gene	315340	315744	.	-	.	ID=GCA000560365_00270_gene;locus_tag=GCA000560365_00270;gene=rbsD
contig_1	Pyrodigal	CDS	315340	315744	.	-	0	ID=GCA000560365_00270;Name=D-ribose pyranase;locus_tag=GCA000560365_00270;product=D-ribose pyranase;Dbxref=GO:0005829,GO:0016872,GO:0019303,GO:0048029,GO:0062193;gene=rbsD;Parent=GCA000560365_00270_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1869,COG:G,KEGG:K06726,RefSeq:WP_000747850.1,SO:0001217,UniParc:UPI0000696B98,UniRef:UniRef100_Q2FK01,UniRef:UniRef50_Q2G1A5,UniRef:UniRef90_Q2G1A5;ec_number=5.4.99.62
contig_1	Pyrodigal	gene	315759	316640	.	-	.	ID=GCA000560365_00271_gene;locus_tag=GCA000560365_00271;gene=rbsU
contig_1	Pyrodigal	CDS	315759	316640	.	-	0	ID=GCA000560365_00271;Name=ribose transporter RbsU;locus_tag=GCA000560365_00271;product=ribose transporter RbsU;Dbxref=GO:0005886,GO:0015144,GO:0015591,GO:0015752;gene=rbsU;Parent=GCA000560365_00271_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000029204,COG:COG4975,COG:G,KEGG:K06216,RefSeq:WP_031808132.1,SO:0001217,UniParc:UPI00044C17EB,UniRef:UniRef100_UPI00044C17EB,UniRef:UniRef50_Q8CN16,UniRef:UniRef90_P60946
contig_1	Pyrodigal	gene	316872	317870	.	-	.	ID=GCA000560365_00272_gene;locus_tag=GCA000560365_00272;gene=rbsR
contig_1	Pyrodigal	CDS	316872	317870	.	-	0	ID=GCA000560365_00272;Name=ribose utilization transcriptional repressor RbsR;locus_tag=GCA000560365_00272;product=ribose utilization transcriptional repressor RbsR;gene=rbsR;Parent=GCA000560365_00272_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1609,COG:K,RefSeq:WP_000757880.1,SO:0001217,UniParc:UPI0000054670,UniRef:UniRef100_Q2G1A3,UniRef:UniRef50_Q2G1A3,UniRef:UniRef90_Q2G1A3
contig_1	Pyrodigal	gene	318250	318642	.	+	.	ID=GCA000560365_00273_gene;locus_tag=GCA000560365_00273
contig_1	Pyrodigal	CDS	318250	318642	.	+	0	ID=GCA000560365_00273;Name=Phage protein;locus_tag=GCA000560365_00273;product=Phage protein;Parent=GCA000560365_00273_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001159765.1,SO:0001217,UniParc:UPI000005466E,UniRef:UniRef100_Q2G1A1,UniRef:UniRef50_Q5HRD5,UniRef:UniRef90_A0A7U7JSC9
contig_1	Infernal	gene	318731	318952	.	-	.	ID=GCA000560365_00274_gene;locus_tag=GCA000560365_00274;gene=tsr24
contig_1	Infernal	ncRNA	318731	318952	4.8e-28	-	.	ID=GCA000560365_00274;Name=S. aureus tsr24 small RNA;locus_tag=GCA000560365_00274;product=S. aureus tsr24 small RNA;Dbxref=RFAM:RF02577;Parent=GCA000560365_00274_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02577
contig_1	Pyrodigal	gene	318870	319274	.	+	.	ID=GCA000560365_00275_gene;locus_tag=GCA000560365_00275
contig_1	Pyrodigal	CDS	318870	319274	.	+	0	ID=GCA000560365_00275;Name=Truncated transposase;locus_tag=GCA000560365_00275;product=Truncated transposase;Parent=GCA000560365_00275_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00004B5ABA,UniRef:UniRef100_Q2G1A0,UniRef:UniRef50_Q2G1A0,UniRef:UniRef90_Q2G1A0
contig_1	Pyrodigal	gene	319315	320691	.	-	.	ID=GCA000560365_00276_gene;locus_tag=GCA000560365_00276;gene=uhpC
contig_1	Pyrodigal	CDS	319315	320691	.	-	0	ID=GCA000560365_00276;Name=Quinolone resistance protein NorB;locus_tag=GCA000560365_00276;product=Quinolone resistance protein NorB;gene=uhpC;Parent=GCA000560365_00276_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2271,COG:G,RefSeq:WP_001066545.1,SO:0001217,UniParc:UPI00004B5ABB,UniRef:UniRef100_A0A266CW33,UniRef:UniRef50_A0A115E5S9,UniRef:UniRef90_A0A115E5S9
contig_1	Pyrodigal	gene	320925	321917	.	+	.	ID=GCA000560365_00277_gene;locus_tag=GCA000560365_00277;gene=yxeI
contig_1	Pyrodigal	CDS	320925	321917	.	+	0	ID=GCA000560365_00277;Name=Choloylglycine hydrolase/NAAA C-terminal domain-containing protein;locus_tag=GCA000560365_00277;product=Choloylglycine hydrolase/NAAA C-terminal domain-containing protein;gene=yxeI;Parent=GCA000560365_00277_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3049,COG:MR,RefSeq:WP_000337364.1,SO:0001217,UniParc:UPI0000696B9A,UniRef:UniRef100_A0A266CX41,UniRef:UniRef50_Q2G198,UniRef:UniRef90_Q2G198
contig_1	Pyrodigal	gene	322243	323193	.	+	.	ID=GCA000560365_00278_gene;locus_tag=GCA000560365_00278;gene=lytM
contig_1	Pyrodigal	CDS	322243	323193	.	+	0	ID=GCA000560365_00278;Name=glycine-glycine endopeptidase LytM;locus_tag=GCA000560365_00278;product=glycine-glycine endopeptidase LytM;Dbxref=GO:0004222,GO:0005576,GO:0006508,GO:0046872,GO:0071555;gene=lytM;Parent=GCA000560365_00278_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000736798,COG:COG0739,COG:M,KEGG:K08259,RefSeq:WP_000736798.1,SO:0001217,UniParc:UPI000052A499,UniRef:UniRef100_O33599,UniRef:UniRef50_O33599,UniRef:UniRef90_O33599;ec_number=3.4.24.75
contig_1	Pyrodigal	gene	323245	323904	.	-	.	ID=GCA000560365_00279_gene;locus_tag=GCA000560365_00279;gene=rbbA
contig_1	Pyrodigal	CDS	323245	323904	.	-	0	ID=GCA000560365_00279;Name=ABC transporter domain-containing protein;locus_tag=GCA000560365_00279;product=ABC transporter domain-containing protein;gene=rbbA;Parent=GCA000560365_00279_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1131,COG:JV,RefSeq:WP_000570071.1,SO:0001217,UniParc:UPI0000054669,UniRef:UniRef100_Q2G196,UniRef:UniRef50_Q2G196,UniRef:UniRef90_Q2G196
contig_1	Pyrodigal	gene	323918	324838	.	-	.	ID=GCA000560365_00280_gene;locus_tag=GCA000560365_00280
contig_1	Pyrodigal	CDS	323918	324838	.	-	0	ID=GCA000560365_00280;Name=ABC-2 type transporter transmembrane domain-containing protein;locus_tag=GCA000560365_00280;product=ABC-2 type transporter transmembrane domain-containing protein;Parent=GCA000560365_00280_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000806113.1,SO:0001217,UniParc:UPI00004B5ABD,UniRef:UniRef100_Q2G195,UniRef:UniRef50_Q2G195,UniRef:UniRef90_Q2G195
contig_1	Pyrodigal	gene	324835	326001	.	-	.	ID=GCA000560365_00281_gene;locus_tag=GCA000560365_00281
contig_1	Pyrodigal	CDS	324835	326001	.	-	0	ID=GCA000560365_00281;Name=ABC-2 type transporter transmembrane domain-containing protein;locus_tag=GCA000560365_00281;product=ABC-2 type transporter transmembrane domain-containing protein;Parent=GCA000560365_00281_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000848764.1,SO:0001217,UniParc:UPI00000522E9,UniRef:UniRef100_Q2G194,UniRef:UniRef50_Q2G194,UniRef:UniRef90_Q2G194
contig_1	Pyrodigal	gene	326069	327592	.	-	.	ID=GCA000560365_00282_gene;locus_tag=GCA000560365_00282
contig_1	Pyrodigal	CDS	326069	327592	.	-	0	ID=GCA000560365_00282;Name=hypothetical protein;locus_tag=GCA000560365_00282;product=hypothetical protein;Parent=GCA000560365_00282_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000038517.1,SO:0001217,UniParc:UPI0000696B9B,UniRef:UniRef100_Q2G193,UniRef:UniRef50_Q2G193,UniRef:UniRef90_Q2G193
contig_1	Pyrodigal	gene	327863	328516	.	+	.	ID=GCA000560365_00283_gene;locus_tag=GCA000560365_00283
contig_1	Pyrodigal	CDS	327863	328516	.	+	0	ID=GCA000560365_00283;Name=DUF5079 domain-containing protein;locus_tag=GCA000560365_00283;product=DUF5079 domain-containing protein;Parent=GCA000560365_00283_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000421225.1,SO:0001217,UniParc:UPI0000054665,UniRef:UniRef100_Q2G192,UniRef:UniRef50_Q2G192,UniRef:UniRef90_Q2G192
contig_1	Pyrodigal	gene	328550	329137	.	+	.	ID=GCA000560365_00284_gene;locus_tag=GCA000560365_00284
contig_1	Pyrodigal	CDS	328550	329137	.	+	0	ID=GCA000560365_00284;Name=DUF5080 domain-containing protein;locus_tag=GCA000560365_00284;product=DUF5080 domain-containing protein;Parent=GCA000560365_00284_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000583198.1,SO:0001217,UniParc:UPI0000054664,UniRef:UniRef100_Q2G191,UniRef:UniRef50_Q2G191,UniRef:UniRef90_Q2G191
contig_1	Pyrodigal	gene	329280	330182	.	-	.	ID=GCA000560365_00285_gene;locus_tag=GCA000560365_00285
contig_1	Pyrodigal	CDS	329280	330182	.	-	0	ID=GCA000560365_00285;Name=Secretory antigen;locus_tag=GCA000560365_00285;product=Secretory antigen;Parent=GCA000560365_00285_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3942,COG:M,SO:0001217,UniParc:UPI0000052276,UniRef:UniRef100_Q2G190,UniRef:UniRef50_A0A658WJQ6,UniRef:UniRef90_A0A658WJQ6
contig_1	Pyrodigal	gene	330421	330714	.	+	.	ID=GCA000560365_00286_gene;locus_tag=GCA000560365_00286;gene=esxA
contig_1	Pyrodigal	CDS	330421	330714	.	+	0	ID=GCA000560365_00286;Name=WXG100 family type VII secretion effector EsxA;locus_tag=GCA000560365_00286;product=WXG100 family type VII secretion effector EsxA;Dbxref=GO:0005576;gene=esxA;Parent=GCA000560365_00286_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001240826,COG:COG4842,COG:V,RefSeq:WP_001240826.1,SO:0001217,UniParc:UPI00000D7884,UniRef:UniRef100_Q2G189,UniRef:UniRef50_Q2G189,UniRef:UniRef90_Q2G189
contig_1	Pyrodigal	gene	330798	333827	.	+	.	ID=GCA000560365_00287_gene;locus_tag=GCA000560365_00287;gene=esaA
contig_1	Pyrodigal	CDS	330798	333827	.	+	0	ID=GCA000560365_00287;Name=type VII secretion system protein EsaA;locus_tag=GCA000560365_00287;product=type VII secretion system protein EsaA;Dbxref=GO:0005886;gene=esaA;Parent=GCA000560365_00287_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1511,COG:S,KEGG:K01421,RefSeq:WP_000728949.1,SO:0001217,UniParc:UPI0000054662,UniRef:UniRef100_Q2G188,UniRef:UniRef50_Q2G188,UniRef:UniRef90_Q2G188,VFDB:VFC0086,VFDB:VFG002406
contig_1	Pyrodigal	gene	333827	334285	.	+	.	ID=GCA000560365_00288_gene;locus_tag=GCA000560365_00288;gene=essA
contig_1	Pyrodigal	CDS	333827	334285	.	+	0	ID=GCA000560365_00288;Name=type VII secretion system protein EssA%2C monotopic membrane protein;locus_tag=GCA000560365_00288;product=type VII secretion system protein EssA%2C monotopic membrane protein;Dbxref=GO:0005886,GO:0009306;gene=essA;Parent=GCA000560365_00288_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000928935.1,SO:0001217,UniParc:UPI0000054661,UniRef:UniRef100_Q5HJ89,UniRef:UniRef50_P0C052,UniRef:UniRef90_P0C052,VFDB:VFC0086,VFDB:VFG002404
contig_1	Pyrodigal	gene	334257	334499	.	+	.	ID=GCA000560365_00289_gene;locus_tag=GCA000560365_00289;gene=esaB
contig_1	Pyrodigal	CDS	334257	334499	.	+	0	ID=GCA000560365_00289;Name=type VII secretion protein EsaB;locus_tag=GCA000560365_00289;product=type VII secretion protein EsaB;Dbxref=GO:0005737;gene=esaB;Parent=GCA000560365_00289_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001071606,COG:COG5417,COG:U,RefSeq:WP_001071606.1,SO:0001217,UniParc:UPI0000054660,UniRef:UniRef100_Q5HJ88,UniRef:UniRef50_Q5HJ88,UniRef:UniRef90_Q5HJ88
contig_1	Pyrodigal	gene	334512	335846	.	+	.	ID=GCA000560365_00290_gene;locus_tag=GCA000560365_00290;gene=essB
contig_1	Pyrodigal	CDS	334512	335846	.	+	0	ID=GCA000560365_00290;Name=type VII secretion protein EssB;locus_tag=GCA000560365_00290;product=type VII secretion protein EssB;Dbxref=GO:0005886,GO:0009306;gene=essB;Parent=GCA000560365_00290_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4499,COG:U,RefSeq:WP_000240338.1,SO:0001217,UniParc:UPI000005465F,UniRef:UniRef100_Q2G185,UniRef:UniRef50_Q2G185,UniRef:UniRef90_Q2G185
contig_1	Pyrodigal	gene	335868	340307	.	+	.	ID=GCA000560365_00291_gene;locus_tag=GCA000560365_00291;gene=essC
contig_1	Pyrodigal	CDS	335868	340307	.	+	0	ID=GCA000560365_00291;Name=type VII secretion system protein EssC%2C FtsK/SpoIIIE family ATPase;locus_tag=GCA000560365_00291;product=type VII secretion system protein EssC%2C FtsK/SpoIIIE family ATPase;Dbxref=GO:0003677,GO:0005524,GO:0005886,GO:0009306;gene=essC;Parent=GCA000560365_00291_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1674,COG:D,RefSeq:WP_000549278.1,SO:0001217,UniParc:UPI000005465D,UniRef:UniRef100_Q2G184,UniRef:UniRef50_Q2G184,UniRef:UniRef90_Q2G184,VFDB:VFC0086,VFDB:VFG002409
contig_1	Pyrodigal	gene	340337	340729	.	+	.	ID=GCA000560365_00292_gene;locus_tag=GCA000560365_00292;gene=esxC
contig_1	Pyrodigal	CDS	340337	340729	.	+	0	ID=GCA000560365_00292;Name=type VII secretion system secreted protein EsxC;locus_tag=GCA000560365_00292;product=type VII secretion system secreted protein EsxC;Dbxref=GO:0005576;gene=esxC;Parent=GCA000560365_00292_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001010289.1,SO:0001217,UniParc:UPI000005465C,UniRef:UniRef100_A0A0H2XIK2,UniRef:UniRef50_Q99WT8,UniRef:UniRef90_Q99WT8,VFDB:VFC0086,VFDB:VFG002410
contig_1	Pyrodigal	gene	340745	341059	.	+	.	ID=GCA000560365_00293_gene;locus_tag=GCA000560365_00293;gene=esxB
contig_1	Pyrodigal	CDS	340745	341059	.	+	0	ID=GCA000560365_00293;Name=WXG100 family type VII secretion effector EsxB;locus_tag=GCA000560365_00293;product=WXG100 family type VII secretion effector EsxB;Dbxref=GO:0005576;gene=esxB;Parent=GCA000560365_00293_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000509668,RefSeq:WP_000509668.1,SO:0001217,UniParc:UPI000005465B,UniRef:UniRef100_Q2G182,UniRef:UniRef50_Q2G182,UniRef:UniRef90_Q2G182
contig_1	Pyrodigal	gene	341056	341733	.	+	.	ID=GCA000560365_00294_gene;locus_tag=GCA000560365_00294;gene=essE
contig_1	Pyrodigal	CDS	341056	341733	.	+	0	ID=GCA000560365_00294;Name=type VII secretion system chaperone protein;locus_tag=GCA000560365_00294;product=type VII secretion system chaperone protein;Dbxref=GO:0005576;gene=essE;Parent=GCA000560365_00294_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000005465A,UniRef:UniRef100_Q2G181,UniRef:UniRef50_Q2G181,UniRef:UniRef90_Q2G181,VFDB:VFC0086,VFDB:VFG049701
contig_1	Pyrodigal	gene	341739	342050	.	+	.	ID=GCA000560365_00295_gene;locus_tag=GCA000560365_00295;gene=esxD
contig_1	Pyrodigal	CDS	341739	342050	.	+	0	ID=GCA000560365_00295;Name=type VII secretion system secreted protein EsxD;locus_tag=GCA000560365_00295;product=type VII secretion system secreted protein EsxD;Dbxref=GO:0005576;gene=esxD;Parent=GCA000560365_00295_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001F24552,UniRef:UniRef100_A0A1Q4GZ01,UniRef:UniRef50_A0A0H2XDF9,UniRef:UniRef90_A0A0H2XDF9,VFDB:VFC0086,VFDB:VFG049714
contig_1	Pyrodigal	gene	342051	343904	.	+	.	ID=GCA000560365_00296_gene;locus_tag=GCA000560365_00296;gene=esaD
contig_1	Pyrodigal	CDS	342051	343904	.	+	0	ID=GCA000560365_00296;Name=type VII secretion system secreted protein%2C a nuclease toxin EsaD;locus_tag=GCA000560365_00296;product=type VII secretion system secreted protein%2C a nuclease toxin EsaD;Dbxref=GO:0005576,GO:0005886;gene=esaD;Parent=GCA000560365_00296_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5444,COG:V,SO:0001217,UniParc:UPI000157442A,UniRef:UniRef100_Q2G179,UniRef:UniRef50_Q2G179,UniRef:UniRef90_Q2G179,VFDB:VFC0086,VFDB:VFG049727
contig_1	Pyrodigal	gene	343915	344406	.	+	.	ID=GCA000560365_00297_gene;locus_tag=GCA000560365_00297;gene=esaG
contig_1	Pyrodigal	CDS	343915	344406	.	+	0	ID=GCA000560365_00297;Name=Type VII secretion system protein EsaG;locus_tag=GCA000560365_00297;product=Type VII secretion system protein EsaG;Dbxref=GO:0005737;gene=esaG;Parent=GCA000560365_00297_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000142049.1,SO:0001217,UniParc:UPI00000547D8,UniRef:UniRef100_Q2G178,UniRef:UniRef50_Q2G178,UniRef:UniRef90_Q2G178
contig_1	Pyrodigal	gene	344614	345297	.	+	.	ID=GCA000560365_00298_gene;locus_tag=GCA000560365_00298
contig_1	Pyrodigal	CDS	344614	345297	.	+	0	ID=GCA000560365_00298;Name=DUF5079 domain-containing protein;locus_tag=GCA000560365_00298;product=DUF5079 domain-containing protein;Parent=GCA000560365_00298_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000208414.1,SO:0001217,UniParc:UPI00004B5AC2,UniRef:UniRef100_A0A0D6GEJ4,UniRef:UniRef50_Q2G177,UniRef:UniRef90_Q2G177
contig_1	Pyrodigal	gene	345444	346055	.	+	.	ID=GCA000560365_00299_gene;locus_tag=GCA000560365_00299
contig_1	Pyrodigal	CDS	345444	346055	.	+	0	ID=GCA000560365_00299;Name=DUF5080 domain-containing protein;locus_tag=GCA000560365_00299;product=DUF5080 domain-containing protein;Parent=GCA000560365_00299_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000394915.1,SO:0001217,UniParc:UPI00004B5AC3,UniRef:UniRef100_Q2G176,UniRef:UniRef50_Q2G176,UniRef:UniRef90_Q2G176
contig_1	Pyrodigal	gene	346191	346409	.	+	.	ID=GCA000560365_00300_gene;locus_tag=GCA000560365_00300
contig_1	Pyrodigal	CDS	346191	346409	.	+	0	ID=GCA000560365_00300;Name=Mid2-like cell wall stress sensor domain protein;locus_tag=GCA000560365_00300;product=Mid2-like cell wall stress sensor domain protein;Parent=GCA000560365_00300_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000431307.1,SO:0001217,UniParc:UPI000005490C,UniRef:UniRef100_Q2G175,UniRef:UniRef50_A0A1D4LJZ2,UniRef:UniRef90_A0A2K4AI94
contig_1	Pyrodigal	gene	346541	347041	.	+	.	ID=GCA000560365_00301_gene;locus_tag=GCA000560365_00301
contig_1	Pyrodigal	CDS	346541	347041	.	+	0	ID=GCA000560365_00301;Name=TIGR01741 family protein;locus_tag=GCA000560365_00301;product=TIGR01741 family protein;Parent=GCA000560365_00301_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000142036.1,SO:0001217,UniParc:UPI00004B5AC4,UniRef:UniRef100_A0A266CYE9,UniRef:UniRef50_Q2G178,UniRef:UniRef90_A0A266CYE9
contig_1	Pyrodigal	gene	347052	347552	.	+	.	ID=GCA000560365_00302_gene;locus_tag=GCA000560365_00302
contig_1	Pyrodigal	CDS	347052	347552	.	+	0	ID=GCA000560365_00302;Name=TIGR01741 family protein;locus_tag=GCA000560365_00302;product=TIGR01741 family protein;Parent=GCA000560365_00302_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001008475.1,SO:0001217,UniParc:UPI000157442B,UniRef:UniRef100_A0A2C9TVT7,UniRef:UniRef50_Q2G2Q5,UniRef:UniRef90_A0A0H2X107
contig_1	Pyrodigal	gene	347563	347715	.	+	.	ID=GCA000560365_00303_gene;locus_tag=GCA000560365_00303
contig_1	Pyrodigal	CDS	347563	347715	.	+	0	ID=GCA000560365_00303;Name=TIGR01741 family protein;locus_tag=GCA000560365_00303;product=TIGR01741 family protein;Parent=GCA000560365_00303_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000575670.1,SO:0001217,UniParc:UPI00000545B4,UniRef:UniRef100_UPI00000545B4,UniRef:UniRef50_A0A7I8NL17,UniRef:UniRef90_UPI0011D25C7E
contig_1	Pyrodigal	gene	347759	348058	.	+	.	ID=GCA000560365_00304_gene;locus_tag=GCA000560365_00304
contig_1	Pyrodigal	CDS	347759	348058	.	+	0	ID=GCA000560365_00304;Name=TIGR01741 family protein;locus_tag=GCA000560365_00304;product=TIGR01741 family protein;Parent=GCA000560365_00304_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A380DK83,UniRef:UniRef90_UPI000A2491A1
contig_1	Pyrodigal	gene	348069	348560	.	+	.	ID=GCA000560365_00305_gene;locus_tag=GCA000560365_00305
contig_1	Pyrodigal	CDS	348069	348560	.	+	0	ID=GCA000560365_00305;Name=TIGR01741 family protein;locus_tag=GCA000560365_00305;product=TIGR01741 family protein;Parent=GCA000560365_00305_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000142033.1,SO:0001217,UniParc:UPI0000696B9D,UniRef:UniRef100_A0A266CXZ5,UniRef:UniRef50_Q2G2Q9,UniRef:UniRef90_A0A0H2X0D4
contig_1	Pyrodigal	gene	348770	349453	.	+	.	ID=GCA000560365_00306_gene;locus_tag=GCA000560365_00306
contig_1	Pyrodigal	CDS	348770	349453	.	+	0	ID=GCA000560365_00306;Name=DUF5079 domain-containing protein;locus_tag=GCA000560365_00306;product=DUF5079 domain-containing protein;Parent=GCA000560365_00306_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000208389.1,SO:0001217,UniParc:UPI00000545B1,UniRef:UniRef100_A0A2C9TLI8,UniRef:UniRef50_Q2G177,UniRef:UniRef90_Q2G177
contig_1	Pyrodigal	gene	350039	350539	.	+	.	ID=GCA000560365_00307_gene;locus_tag=GCA000560365_00307
contig_1	Pyrodigal	CDS	350039	350539	.	+	0	ID=GCA000560365_00307;Name=TIGR01741 family protein;locus_tag=GCA000560365_00307;product=TIGR01741 family protein;Parent=GCA000560365_00307_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000141982.1,SO:0001217,UniParc:UPI00000545B0,UniRef:UniRef100_A0A2C9TLT0,UniRef:UniRef50_Q2G178,UniRef:UniRef90_A0A2C9TLT0
contig_1	Pyrodigal	gene	350551	351051	.	+	.	ID=GCA000560365_00308_gene;locus_tag=GCA000560365_00308
contig_1	Pyrodigal	CDS	350551	351051	.	+	0	ID=GCA000560365_00308;Name=Cytosolic protein;locus_tag=GCA000560365_00308;product=Cytosolic protein;Parent=GCA000560365_00308_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000142145.1,SO:0001217,UniParc:UPI00004B5AC7,UniRef:UniRef100_A0A2C9TRD9,UniRef:UniRef50_Q2G2Q5,UniRef:UniRef90_A0A2C9TRD9
contig_1	Pyrodigal	gene	351062	351562	.	+	.	ID=GCA000560365_00309_gene;locus_tag=GCA000560365_00309
contig_1	Pyrodigal	CDS	351062	351562	.	+	0	ID=GCA000560365_00309;Name=TIGR01741 family protein;locus_tag=GCA000560365_00309;product=TIGR01741 family protein;Parent=GCA000560365_00309_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000142176.1,SO:0001217,UniParc:UPI00004B5AC8,UniRef:UniRef100_A0A2C9TR44,UniRef:UniRef50_Q2G2Q9,UniRef:UniRef90_Q2G2Q9
contig_1	Pyrodigal	gene	351573	352073	.	+	.	ID=GCA000560365_00310_gene;locus_tag=GCA000560365_00310;gene=esaG
contig_1	Pyrodigal	CDS	351573	352073	.	+	0	ID=GCA000560365_00310;Name=TIGR01741 family protein;locus_tag=GCA000560365_00310;product=TIGR01741 family protein;gene=esaG;Parent=GCA000560365_00310_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000141942.1,SO:0001217,UniParc:UPI00000545AD,UniRef:UniRef100_Q2G2Q8,UniRef:UniRef50_Q2G2Q8,UniRef:UniRef90_Q2G2Q8,VFDB:VFC0086,VFDB:VFG049753
contig_1	Pyrodigal	gene	352084	352572	.	+	.	ID=GCA000560365_00311_gene;locus_tag=GCA000560365_00311
contig_1	Pyrodigal	CDS	352084	352572	.	+	0	ID=GCA000560365_00311;Name=TIGR01741 family protein;locus_tag=GCA000560365_00311;product=TIGR01741 family protein;Parent=GCA000560365_00311_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000142094.1,SO:0001217,UniParc:UPI00004B5ACC,UniRef:UniRef100_Q2G2Q5,UniRef:UniRef50_Q2G2Q5,UniRef:UniRef90_Q2G2Q5
contig_1	Pyrodigal	gene	353195	353569	.	+	.	ID=GCA000560365_00312_gene;locus_tag=GCA000560365_00312
contig_1	Pyrodigal	CDS	353195	353569	.	+	0	ID=GCA000560365_00312;Name=DUF4467 domain-containing protein;locus_tag=GCA000560365_00312;product=DUF4467 domain-containing protein;Parent=GCA000560365_00312_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000822161.1,SO:0001217,UniParc:UPI00000D786E,UniRef:UniRef100_Q2G174,UniRef:UniRef50_Q2G174,UniRef:UniRef90_Q2G174
contig_1	Pyrodigal	gene	353722	354120	.	+	.	ID=GCA000560365_00313_gene;locus_tag=GCA000560365_00313
contig_1	Pyrodigal	CDS	353722	354120	.	+	0	ID=GCA000560365_00313;Name=DUF4064 domain-containing protein;locus_tag=GCA000560365_00313;product=DUF4064 domain-containing protein;Parent=GCA000560365_00313_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000415675.1,SO:0001217,UniParc:UPI00000545A6,UniRef:UniRef100_Q2G173,UniRef:UniRef50_Q2G173,UniRef:UniRef90_Q2G173
contig_1	Pyrodigal	gene	354336	355160	.	-	.	ID=GCA000560365_00314_gene;locus_tag=GCA000560365_00314;gene=focA
contig_1	Pyrodigal	CDS	354336	355160	.	-	0	ID=GCA000560365_00314;Name=Formate/nitrite transporter;locus_tag=GCA000560365_00314;product=Formate/nitrite transporter;gene=focA;Parent=GCA000560365_00314_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2116,COG:P,RefSeq:WP_000659770.1,SO:0001217,UniParc:UPI00000D7745,UniRef:UniRef100_Q2G172,UniRef:UniRef50_Q2G172,UniRef:UniRef90_Q2G172
contig_1	Pyrodigal	gene	355397	356704	.	-	.	ID=GCA000560365_00315_gene;locus_tag=GCA000560365_00315;gene=brnQ
contig_1	Pyrodigal	CDS	355397	356704	.	-	0	ID=GCA000560365_00315;Name=branched-chain amino acid transport system II carrier protein;locus_tag=GCA000560365_00315;product=branched-chain amino acid transport system II carrier protein;Dbxref=GO:0015658,GO:0015803,GO:0016020;gene=brnQ;Parent=GCA000560365_00315_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1114,COG:E,RefSeq:WP_000745099.1,SO:0001217,UniParc:UPI00000522EA,UniRef:UniRef100_Q2G171,UniRef:UniRef50_A0A391ES74,UniRef:UniRef90_A0A391ES74
contig_1	Pyrodigal	gene	357288	358178	.	+	.	ID=GCA000560365_00316_gene;locus_tag=GCA000560365_00316
contig_1	Pyrodigal	CDS	357288	358178	.	+	0	ID=GCA000560365_00316;Name=5'-nucleotidase%2C lipoprotein e(P4) family;locus_tag=GCA000560365_00316;product=5'-nucleotidase%2C lipoprotein e(P4) family;Dbxref=GO:0009279;Parent=GCA000560365_00316_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2503,COG:R,RefSeq:WP_001033876.1,SO:0001217,UniParc:UPI00000545A3,UniRef:UniRef100_Q2G170,UniRef:UniRef50_B9DL66,UniRef:UniRef90_A0A077UG02
contig_1	Pyrodigal	gene	358427	359476	.	+	.	ID=GCA000560365_00317_gene;locus_tag=GCA000560365_00317;gene=hrtB
contig_1	Pyrodigal	CDS	358427	359476	.	+	0	ID=GCA000560365_00317;Name=Putative hemin transport system permease protein HrtB;locus_tag=GCA000560365_00317;product=Putative hemin transport system permease protein HrtB;gene=hrtB;Parent=GCA000560365_00317_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4591,COG:M,RefSeq:WP_000477934.1,SO:0001217,UniParc:UPI00000545A1,UniRef:UniRef100_Q2G168,UniRef:UniRef50_Q2G168,UniRef:UniRef90_Q2G168
contig_1	Pyrodigal	gene	359489	360166	.	+	.	ID=GCA000560365_00318_gene;locus_tag=GCA000560365_00318;gene=hrtA
contig_1	Pyrodigal	CDS	359489	360166	.	+	0	ID=GCA000560365_00318;Name=Putative hemin import ATP-binding protein HrtA;locus_tag=GCA000560365_00318;product=Putative hemin import ATP-binding protein HrtA;gene=hrtA;Parent=GCA000560365_00318_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1136,COG:M,RefSeq:WP_000911019.1,SO:0001217,UniParc:UPI00000545A0,UniRef:UniRef100_A0A1D4ZP35,UniRef:UniRef50_A0A0Y9VH18,UniRef:UniRef90_A0A0Y9VH18
contig_1	Pyrodigal	gene	360374	361405	.	+	.	ID=GCA000560365_00319_gene;locus_tag=GCA000560365_00319;gene=frwC
contig_1	Pyrodigal	CDS	360374	361405	.	+	0	ID=GCA000560365_00319;Name=Phosphotransferase system EIIC domain-containing protein;locus_tag=GCA000560365_00319;product=Phosphotransferase system EIIC domain-containing protein;gene=frwC;Parent=GCA000560365_00319_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1299,COG:G,SO:0001217,UniParc:UPI00000D9C2A,UniRef:UniRef100_A0A0H3K6N4,UniRef:UniRef50_Q2G165,UniRef:UniRef90_Q2G165
contig_1	Pyrodigal	gene	361748	362866	.	+	.	ID=GCA000560365_00320_gene;locus_tag=GCA000560365_00320
contig_1	Pyrodigal	CDS	361748	362866	.	+	0	ID=GCA000560365_00320;Name=Ribokinase;locus_tag=GCA000560365_00320;product=Ribokinase;Parent=GCA000560365_00320_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001283977.1,SO:0001217,UniParc:UPI00000D9C2B,UniRef:UniRef100_Q2G164,UniRef:UniRef50_K1L4B1,UniRef:UniRef90_A0A7I8NL06
contig_1	Pyrodigal	gene	362841	363764	.	+	.	ID=GCA000560365_00321_gene;locus_tag=GCA000560365_00321;gene=psuG
contig_1	Pyrodigal	CDS	362841	363764	.	+	0	ID=GCA000560365_00321;Name=Pseudouridine-5'-phosphate glycosidase;locus_tag=GCA000560365_00321;product=Pseudouridine-5'-phosphate glycosidase;Dbxref=GO:0004730,GO:0005737,GO:0016798,GO:0046113,GO:0046872;gene=psuG;Parent=GCA000560365_00321_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2313,COG:F,RefSeq:WP_000002068.1,SO:0001217,UniParc:UPI000005459C,UniRef:UniRef100_Q2G163,UniRef:UniRef50_Q28PY7,UniRef:UniRef90_Q8NYD0;ec_number=4.2.1.70
contig_1	Pyrodigal	gene	363775	364995	.	+	.	ID=GCA000560365_00322_gene;locus_tag=GCA000560365_00322;gene=nupC
contig_1	Pyrodigal	CDS	363775	364995	.	+	0	ID=GCA000560365_00322;Name=NupC/NupG family nucleoside CNT transporter;locus_tag=GCA000560365_00322;product=NupC/NupG family nucleoside CNT transporter;gene=nupC;Parent=GCA000560365_00322_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1972,COG:F,KEGG:K11535,RefSeq:WP_001022961.1,SO:0001217,UniParc:UPI000005459B,UniRef:UniRef100_Q2G162,UniRef:UniRef50_Q2G162,UniRef:UniRef90_Q2G162
contig_1	Pyrodigal	gene	365100	366632	.	-	.	ID=GCA000560365_00323_gene;locus_tag=GCA000560365_00323;gene=putP
contig_1	Pyrodigal	CDS	365100	366632	.	-	0	ID=GCA000560365_00323;Name=Na+/proline symporter;locus_tag=GCA000560365_00323;product=Na+/proline symporter;gene=putP;Parent=GCA000560365_00323_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0591,COG:E,RefSeq:WP_000665736.1,SO:0001217,UniParc:UPI00004B5ACD,UniRef:UniRef100_Q2G161,UniRef:UniRef50_Q2G161,UniRef:UniRef90_Q2G161
contig_1	Pyrodigal	gene	366672	367553	.	-	.	ID=GCA000560365_00324_gene;locus_tag=GCA000560365_00324;gene=nanA
contig_1	Pyrodigal	CDS	366672	367553	.	-	0	ID=GCA000560365_00324;Name=N-acetylneuraminate lyase;locus_tag=GCA000560365_00324;product=N-acetylneuraminate lyase;Dbxref=GO:0005829,GO:0005975,GO:0008747,GO:0019262;gene=nanA;Parent=GCA000560365_00324_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0329,COG:EM,RefSeq:WP_001030738.1,SO:0001217,UniParc:UPI0000054599,UniRef:UniRef100_Q2G160,UniRef:UniRef50_Q2G160,UniRef:UniRef90_Q2G160;ec_number=4.1.3.3
contig_1	Pyrodigal	gene	367711	368571	.	+	.	ID=GCA000560365_00325_gene;locus_tag=GCA000560365_00325;gene=nagC
contig_1	Pyrodigal	CDS	367711	368571	.	+	0	ID=GCA000560365_00325;Name=Glucokinase;locus_tag=GCA000560365_00325;product=Glucokinase;gene=nagC;Parent=GCA000560365_00325_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1940,COG:GK,RefSeq:WP_000291445.1,SO:0001217,UniParc:UPI00000D9C2F,UniRef:UniRef100_Q2G159,UniRef:UniRef50_A0A2K4AIW7,UniRef:UniRef90_A0A2K4AIW7
contig_1	Pyrodigal	gene	368849	369649	.	-	.	ID=GCA000560365_00326_gene;locus_tag=GCA000560365_00326;gene=rpiR
contig_1	Pyrodigal	CDS	368849	369649	.	-	0	ID=GCA000560365_00326;Name=MurR/RpiR family transcriptional regulator;locus_tag=GCA000560365_00326;product=MurR/RpiR family transcriptional regulator;gene=rpiR;Parent=GCA000560365_00326_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1737,COG:K,RefSeq:WP_000667382.1,SO:0001217,UniParc:UPI0000054596,UniRef:UniRef100_Q2G158,UniRef:UniRef50_Q2G158,UniRef:UniRef90_Q2G158
contig_1	Pyrodigal	gene	369789	370457	.	+	.	ID=GCA000560365_00327_gene;locus_tag=GCA000560365_00327;gene=nanE
contig_1	Pyrodigal	CDS	369789	370457	.	+	0	ID=GCA000560365_00327;Name=Putative N-acetylmannosamine-6-phosphate 2-epimerase;locus_tag=GCA000560365_00327;product=Putative N-acetylmannosamine-6-phosphate 2-epimerase;Dbxref=GO:0005829,GO:0005975,GO:0006053,GO:0019262,GO:0047465;gene=nanE;Parent=GCA000560365_00327_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3010,COG:G,KEGG:K01788,RefSeq:WP_000936720.1,SO:0001217,UniParc:UPI0000054595,UniRef:UniRef100_Q2G157,UniRef:UniRef50_Q8XNZ3,UniRef:UniRef90_Q2G157;ec_number=5.1.3.9
contig_1	Pyrodigal	gene	370584	371945	.	-	.	ID=GCA000560365_00328_gene;locus_tag=GCA000560365_00328;gene=spoVV
contig_1	Pyrodigal	CDS	370584	371945	.	-	0	ID=GCA000560365_00328;Name=Nucleoside transporter/FeoB GTPase Gate domain-containing protein;locus_tag=GCA000560365_00328;product=Nucleoside transporter/FeoB GTPase Gate domain-containing protein;gene=spoVV;Parent=GCA000560365_00328_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3314,COG:DE,SO:0001217,UniParc:UPI0001574440,UniRef:UniRef100_A0A0H3K5Z9,UniRef:UniRef50_Q2G156,UniRef:UniRef90_Q2G156
contig_1	Pyrodigal	gene	372315	374387	.	+	.	ID=GCA000560365_00329_gene;locus_tag=GCA000560365_00329;gene=geh
contig_1	Pyrodigal	CDS	372315	374387	.	+	0	ID=GCA000560365_00329;Name=glycerol ester hydrolase;locus_tag=GCA000560365_00329;product=glycerol ester hydrolase;Dbxref=GO:0004806,GO:0005509,GO:0005576,GO:0016042,GO:0016298,GO:0046872;gene=geh;Parent=GCA000560365_00329_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1075,COG:I,KEGG:K01046,RefSeq:WP_000943832.1,SO:0001217,UniParc:UPI0000696BA0,UniRef:UniRef100_A0A1S5ZZI3,UniRef:UniRef50_Q99WQ6,UniRef:UniRef90_Q99WQ6,VFDB:VFC0251,VFDB:VFG001316;ec_number=3.1.1.3
contig_1	Pyrodigal	gene	374629	375456	.	-	.	ID=GCA000560365_00330_gene;locus_tag=GCA000560365_00330;gene=aes
contig_1	Pyrodigal	CDS	374629	375456	.	-	0	ID=GCA000560365_00330;Name=BD-FAE-like domain-containing protein;locus_tag=GCA000560365_00330;product=BD-FAE-like domain-containing protein;gene=aes;Parent=GCA000560365_00330_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0657,COG:I,RefSeq:WP_000136020.1,SO:0001217,UniParc:UPI00004B5AF3,UniRef:UniRef100_Q2G154,UniRef:UniRef50_Q2G154,UniRef:UniRef90_Q2G154
contig_1	Pyrodigal	gene	375529	376728	.	-	.	ID=GCA000560365_00331_gene;locus_tag=GCA000560365_00331;gene=fadH
contig_1	Pyrodigal	CDS	375529	376728	.	-	0	ID=GCA000560365_00331;Name=NADH-dependent flavin oxidoreductase;locus_tag=GCA000560365_00331;product=NADH-dependent flavin oxidoreductase;gene=fadH;Parent=GCA000560365_00331_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1902,RefSeq:WP_000286484.1,SO:0001217,UniParc:UPI0000054592,UniRef:UniRef100_Q2G153,UniRef:UniRef50_P0DN73,UniRef:UniRef90_A0A2K4AJN2
contig_1	Bakta	gene	376851	376916	.	+	.	ID=GCA000560365_00332_gene;locus_tag=GCA000560365_00332;inference=ab initio prediction:Bakta
contig_1	Bakta	CDS	376851	376916	.	+	0	ID=GCA000560365_00332;Name=Transposase;locus_tag=GCA000560365_00332;product=Transposase;Parent=GCA000560365_00332_gene;Note=RefSeq:WP_031888542.1,SO:0001217,UniParc:UPI0004F35158,UniRef:UniRef100_A0A2U0IHN5,UniRef:UniRef50_A0A2I7Y8Q6,UniRef:UniRef90_Q2G152
contig_1	Pyrodigal	gene	377030	378031	.	+	.	ID=GCA000560365_00333_gene;locus_tag=GCA000560365_00333;gene=ssuD
contig_1	Pyrodigal	CDS	377030	378031	.	+	0	ID=GCA000560365_00333;Name=LLM class flavin-dependent oxidoreductase;locus_tag=GCA000560365_00333;product=LLM class flavin-dependent oxidoreductase;gene=ssuD;Parent=GCA000560365_00333_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2141,COG:HR,RefSeq:WP_000240058.1,SO:0001217,UniParc:UPI00000D9C36,UniRef:UniRef100_A0A0D6GE99,UniRef:UniRef50_A0A390B198,UniRef:UniRef90_A0A390B198
contig_1	Pyrodigal	gene	378065	378397	.	+	.	ID=GCA000560365_00334_gene;locus_tag=GCA000560365_00334;gene=gcvH
contig_1	Pyrodigal	CDS	378065	378397	.	+	0	ID=GCA000560365_00334;Name=Glycine cleavage system H-like protein;locus_tag=GCA000560365_00334;product=Glycine cleavage system H-like protein;Dbxref=GO:0005829,GO:0005960,GO:0019464;gene=gcvH;Parent=GCA000560365_00334_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0509,COG:E,RefSeq:WP_000731878.1,SO:0001217,UniParc:UPI000005458F,UniRef:UniRef100_A0A0H3JT43,UniRef:UniRef50_P0DN69,UniRef:UniRef90_A0A0H3JT43
contig_1	Pyrodigal	gene	378398	379198	.	+	.	ID=GCA000560365_00335_gene;locus_tag=GCA000560365_00335
contig_1	Pyrodigal	CDS	378398	379198	.	+	0	ID=GCA000560365_00335;Name=protein-ADP-ribose hydrolase;locus_tag=GCA000560365_00335;product=protein-ADP-ribose hydrolase;Dbxref=GO:0016798;Parent=GCA000560365_00335_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000449061.1,SO:0001217,UniParc:UPI00004B5AF4,UniRef:UniRef100_Q5HIW9,UniRef:UniRef50_P67343,UniRef:UniRef90_Q6GJZ1;ec_number=3.2.1.-
contig_1	Pyrodigal	gene	379188	380132	.	+	.	ID=GCA000560365_00336_gene;locus_tag=GCA000560365_00336;gene=sIR2
contig_1	Pyrodigal	CDS	379188	380132	.	+	0	ID=GCA000560365_00336;Name=Protein ADP-ribosyltransferase;locus_tag=GCA000560365_00336;product=Protein ADP-ribosyltransferase;Dbxref=GO:0016779,GO:0046872,GO:0140806,GO:1990404;gene=sIR2;Parent=GCA000560365_00336_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0846,COG:O,RefSeq:WP_001191946.1,SO:0001217,UniParc:UPI00004B5AF5,UniRef:UniRef100_Q2G148,UniRef:UniRef50_A0A0H3JQ59,UniRef:UniRef90_A0A0H3JQ59;ec_number=2.4.2.-
contig_1	Pyrodigal	gene	380110	381132	.	+	.	ID=GCA000560365_00337_gene;locus_tag=GCA000560365_00337;gene=lplA
contig_1	Pyrodigal	CDS	380110	381132	.	+	0	ID=GCA000560365_00337;Name=Lipoate--protein ligase 2;locus_tag=GCA000560365_00337;product=Lipoate--protein ligase 2;Dbxref=GO:0005524,GO:0005737,GO:0009249,GO:0016979,GO:0017118;gene=lplA;Parent=GCA000560365_00337_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0095,COG:H,KEGG:K03800,RefSeq:WP_031808133.1,SO:0001217,UniParc:UPI0004526608,UniRef:UniRef100_UPI0004526608,UniRef:UniRef50_A0A0H3JX98,UniRef:UniRef90_A0A0H3JX98;ec_number=6.3.1.20
contig_1	Pyrodigal	gene	381447	382472	.	+	.	ID=GCA000560365_00338_gene;locus_tag=GCA000560365_00338;gene=wcaG
contig_1	Pyrodigal	CDS	381447	382472	.	+	0	ID=GCA000560365_00338;Name=3-beta hydroxysteroid dehydrogenase/isomerase domain-containing protein;locus_tag=GCA000560365_00338;product=3-beta hydroxysteroid dehydrogenase/isomerase domain-containing protein;gene=wcaG;Parent=GCA000560365_00338_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0451,COG:M,RefSeq:WP_031808134.1,SO:0001217,UniParc:UPI000446548C,UniRef:UniRef100_UPI000446548C,UniRef:UniRef50_A0A0R2AZ52,UniRef:UniRef90_Q2G146
contig_1	Pyrodigal	gene	382565	383911	.	-	.	ID=GCA000560365_00339_gene;locus_tag=GCA000560365_00339;gene=ulaA
contig_1	Pyrodigal	CDS	382565	383911	.	-	0	ID=GCA000560365_00339;Name=PTS ascorbate transporter subunit IIC;locus_tag=GCA000560365_00339;product=PTS ascorbate transporter subunit IIC;Dbxref=GO:0009401;gene=ulaA;Parent=GCA000560365_00339_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3037,COG:G,KEGG:K03475,RefSeq:WP_001147970.1,SO:0001217,UniParc:UPI0000054589,UniRef:UniRef100_Q2G145,UniRef:UniRef50_A0A088T0Z9,UniRef:UniRef90_A0A454H3A5
contig_1	Pyrodigal	gene	383926	384210	.	-	.	ID=GCA000560365_00340_gene;locus_tag=GCA000560365_00340;gene=sgaB
contig_1	Pyrodigal	CDS	383926	384210	.	-	0	ID=GCA000560365_00340;Name=PTS lactose transporter subunit IIB;locus_tag=GCA000560365_00340;product=PTS lactose transporter subunit IIB;gene=sgaB;Parent=GCA000560365_00340_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3414,COG:G,RefSeq:WP_000699538.1,SO:0001217,UniParc:UPI00000D7893,UniRef:UniRef100_Q2G144,UniRef:UniRef50_A0A2S6D6E6,UniRef:UniRef90_A0A2S6D6E6
contig_1	Pyrodigal	gene	384212	384655	.	-	.	ID=GCA000560365_00341_gene;locus_tag=GCA000560365_00341;gene=ptsN
contig_1	Pyrodigal	CDS	384212	384655	.	-	0	ID=GCA000560365_00341;Name=Ascorbate-specific PTS system EIIA component;locus_tag=GCA000560365_00341;product=Ascorbate-specific PTS system EIIA component;gene=ptsN;Parent=GCA000560365_00341_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1762,COG:GT,RefSeq:WP_000050762.1,SO:0001217,UniParc:UPI00000D9C3C,UniRef:UniRef100_Q2G143,UniRef:UniRef50_A0A391DBH8,UniRef:UniRef90_A0A391DBH8
contig_1	Pyrodigal	gene	384660	386615	.	-	.	ID=GCA000560365_00342_gene;locus_tag=GCA000560365_00342;gene=bglG
contig_1	Pyrodigal	CDS	384660	386615	.	-	0	ID=GCA000560365_00342;Name=BglG family transcription antiterminator;locus_tag=GCA000560365_00342;product=BglG family transcription antiterminator;gene=bglG;Parent=GCA000560365_00342_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3711,COG:K,RefSeq:WP_000954261.1,SO:0001217,UniParc:UPI00000D9C3D,UniRef:UniRef100_Q2G142,UniRef:UniRef50_A0A391EL22,UniRef:UniRef90_A0A391EL22
contig_1	Pyrodigal	gene	386827	387246	.	+	.	ID=GCA000560365_00343_gene;locus_tag=GCA000560365_00343;gene=mepR
contig_1	Pyrodigal	CDS	386827	387246	.	+	0	ID=GCA000560365_00343;Name=multidrug efflux transporter transcriptional repressor MepR;locus_tag=GCA000560365_00343;product=multidrug efflux transporter transcriptional repressor MepR;gene=mepR;Parent=GCA000560365_00343_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000397416,COG:COG1846,COG:K,KEGG:K18909,RefSeq:WP_000397416.1,SO:0001217,UniParc:UPI0000054585,UniRef:UniRef100_Q2G141,UniRef:UniRef50_Q2G141,UniRef:UniRef90_Q2G141
contig_1	Pyrodigal	gene	387353	388708	.	+	.	ID=GCA000560365_00344_gene;locus_tag=GCA000560365_00344;gene=mepA
contig_1	Pyrodigal	CDS	387353	388708	.	+	0	ID=GCA000560365_00344;Name=multidrug efflux MATE transporter MepA;locus_tag=GCA000560365_00344;product=multidrug efflux MATE transporter MepA;Dbxref=GO:0005886,GO:0015297,GO:0042910,GO:0046677;gene=mepA;Parent=GCA000560365_00344_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0534,COG:V,KEGG:K18908,NCBIProtein:AAU95768.1,RefSeq:WP_000651060.1,SO:0001217,UniParc:UPI0000054584,UniRef:UniRef100_Q2G140,UniRef:UniRef50_Q2G140,UniRef:UniRef90_Q2G140
contig_1	Pyrodigal	gene	388812	389252	.	+	.	ID=GCA000560365_00345_gene;locus_tag=GCA000560365_00345
contig_1	Pyrodigal	CDS	388812	389252	.	+	0	ID=GCA000560365_00345;Name=Multidrug transporter;locus_tag=GCA000560365_00345;product=Multidrug transporter;Parent=GCA000560365_00345_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000335332.1,SO:0001217,UniParc:UPI0000054582,UniRef:UniRef100_Q2G139,UniRef:UniRef50_Q2G139,UniRef:UniRef90_Q2G139
contig_1	Pyrodigal	gene	389335	390693	.	-	.	ID=GCA000560365_00346_gene;locus_tag=GCA000560365_00346;gene=glpT
contig_1	Pyrodigal	CDS	389335	390693	.	-	0	ID=GCA000560365_00346;Name=glycerol-3-phosphate transporter GlpT;locus_tag=GCA000560365_00346;product=glycerol-3-phosphate transporter GlpT;Dbxref=GO:0015169,GO:0015794,GO:0016020;gene=glpT;Parent=GCA000560365_00346_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2271,COG:G,KEGG:K02445,RefSeq:WP_001010111.1,SO:0001217,UniParc:UPI0000054581,UniRef:UniRef100_Q2G138,UniRef:UniRef50_Q9HTV5,UniRef:UniRef90_Q2G138
contig_1	Pyrodigal	gene	391001	391927	.	+	.	ID=GCA000560365_00347_gene;locus_tag=GCA000560365_00347;gene=gloA
contig_1	Pyrodigal	CDS	391001	391927	.	+	0	ID=GCA000560365_00347;Name=Lactoylglutathione lyase;locus_tag=GCA000560365_00347;product=Lactoylglutathione lyase;gene=gloA;Parent=GCA000560365_00347_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0346,COG:Q,RefSeq:WP_001028221.1,SO:0001217,UniParc:UPI0000696BA3,UniRef:UniRef100_Q2G137,UniRef:UniRef50_A0A077UG87,UniRef:UniRef90_A0A077UG87
contig_1	Pyrodigal	gene	391941	393002	.	+	.	ID=GCA000560365_00348_gene;locus_tag=GCA000560365_00348;gene=ssuD
contig_1	Pyrodigal	CDS	391941	393002	.	+	0	ID=GCA000560365_00348;Name=LLM class flavin-dependent oxidoreductase;locus_tag=GCA000560365_00348;product=LLM class flavin-dependent oxidoreductase;gene=ssuD;Parent=GCA000560365_00348_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2141,COG:HR,RefSeq:WP_001096116.1,SO:0001217,UniParc:UPI00004B5AFA,UniRef:UniRef100_Q2G136,UniRef:UniRef50_A0A391E2C4,UniRef:UniRef90_A0A391E2C4
contig_1	Pyrodigal	gene	393016	393582	.	+	.	ID=GCA000560365_00349_gene;locus_tag=GCA000560365_00349;gene=ssuE
contig_1	Pyrodigal	CDS	393016	393582	.	+	0	ID=GCA000560365_00349;Name=FMN-dependent NADPH-azoreductase;locus_tag=GCA000560365_00349;product=FMN-dependent NADPH-azoreductase;gene=ssuE;Parent=GCA000560365_00349_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0431,RefSeq:WP_001028431.1,SO:0001217,UniParc:UPI00000D9C42,UniRef:UniRef100_Q2G135,UniRef:UniRef50_A0A390B1M0,UniRef:UniRef90_A0A390B1M0
contig_1	Pyrodigal	gene	393642	394637	.	-	.	ID=GCA000560365_00350_gene;locus_tag=GCA000560365_00350;gene=yeiH
contig_1	Pyrodigal	CDS	393642	394637	.	-	0	ID=GCA000560365_00350;Name=UPF0324 membrane protein SACOL0411;locus_tag=GCA000560365_00350;product=UPF0324 membrane protein SACOL0411;Dbxref=GO:0005886;gene=yeiH;Parent=GCA000560365_00350_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2855,COG:S,RefSeq:WP_000157629.1,SO:0001217,UniParc:UPI000005457D,UniRef:UniRef100_Q5HIV4,UniRef:UniRef50_Q5HRT2,UniRef:UniRef90_Q7A7M5
contig_1	Infernal	gene	394763	395016	.	-	.	ID=GCA000560365_00351_gene;locus_tag=GCA000560365_00351;gene=S35
contig_1	Infernal	ncRNA	394763	395016	2.7e-11	-	.	ID=GCA000560365_00351;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000560365_00351;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000560365_00351_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	395056	395601	.	+	.	ID=GCA000560365_00352_gene;locus_tag=GCA000560365_00352;gene=rimL
contig_1	Pyrodigal	CDS	395056	395601	.	+	0	ID=GCA000560365_00352;Name=50S ribosomal protein L7 serine acetyltransferase;locus_tag=GCA000560365_00352;product=50S ribosomal protein L7 serine acetyltransferase;gene=rimL;Parent=GCA000560365_00352_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1670,COG:JO,RefSeq:WP_000467652.1,SO:0001217,UniParc:UPI000005457B,UniRef:UniRef100_Q2G132,UniRef:UniRef50_A0A2S6DUP1,UniRef:UniRef90_A0A2S6DUP1
contig_1	Pyrodigal	gene	395869	396723	.	+	.	ID=GCA000560365_00353_gene;locus_tag=GCA000560365_00353;gene=efeO
contig_1	Pyrodigal	CDS	395869	396723	.	+	0	ID=GCA000560365_00353;Name=iron uptake system protein EfeO;locus_tag=GCA000560365_00353;product=iron uptake system protein EfeO;Dbxref=GO:0005886,GO:0006826;gene=efeO;Parent=GCA000560365_00353_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2822,COG:P,KEGG:K07224,RefSeq:WP_000737193.1,SO:0001217,UniParc:UPI0000696BA5,UniRef:UniRef100_Q2FJS0,UniRef:UniRef50_Q4L8N2,UniRef:UniRef90_Q2G131
contig_1	Pyrodigal	gene	396720	397949	.	+	.	ID=GCA000560365_00354_gene;locus_tag=GCA000560365_00354;gene=efeB
contig_1	Pyrodigal	CDS	396720	397949	.	+	0	ID=GCA000560365_00354;Name=iron uptake transporter deferrochelatase/peroxidase subunit;locus_tag=GCA000560365_00354;product=iron uptake transporter deferrochelatase/peroxidase subunit;Dbxref=GO:0004601,GO:0020037,GO:0033212;gene=efeB;Parent=GCA000560365_00354_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2837,COG:P,KEGG:K16301,RefSeq:WP_000186217.1,SO:0001217,UniParc:UPI00004B5AFC,UniRef:UniRef100_Q2G130,UniRef:UniRef50_A0A390V9S3,UniRef:UniRef90_A0A390V9S3;ec_number=4.98.1.1
contig_1	Pyrodigal	gene	397930	399642	.	+	.	ID=GCA000560365_00355_gene;locus_tag=GCA000560365_00355;gene=fTR1
contig_1	Pyrodigal	CDS	397930	399642	.	+	0	ID=GCA000560365_00355;Name=FTR1 family iron permease;locus_tag=GCA000560365_00355;product=FTR1 family iron permease;gene=fTR1;Parent=GCA000560365_00355_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0672,COG:P,RefSeq:WP_000683699.1,SO:0001217,UniParc:UPI00000522EB,UniRef:UniRef100_Q2G129,UniRef:UniRef50_A0A4Z1BRH1,UniRef:UniRef90_Q2G129
contig_1	Pyrodigal	gene	399734	400339	.	-	.	ID=GCA000560365_00356_gene;locus_tag=GCA000560365_00356;gene=tatC
contig_1	Pyrodigal	CDS	399734	400339	.	-	0	ID=GCA000560365_00356;Name=twin-arginine translocase subunit TatC;locus_tag=GCA000560365_00356;product=twin-arginine translocase subunit TatC;Dbxref=GO:0005886,GO:0015628;gene=tatC;Parent=GCA000560365_00356_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0805,COG:U,KEGG:K03118,SO:0001217,UniParc:UPI0001E071DB,UniRef:UniRef100_A0A2I7Y8N3,UniRef:UniRef50_A0A2S6D619,UniRef:UniRef90_A0A6B5BEK4
contig_1	Pyrodigal	gene	400452	400667	.	-	.	ID=GCA000560365_00357_gene;locus_tag=GCA000560365_00357;gene=tatA
contig_1	Pyrodigal	CDS	400452	400667	.	-	0	ID=GCA000560365_00357;Name=Sec-independent protein translocase protein TatA;locus_tag=GCA000560365_00357;product=Sec-independent protein translocase protein TatA;gene=tatA;Parent=GCA000560365_00357_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1826,COG:U,RefSeq:WP_000632271.1,SO:0001217,UniParc:UPI00000D78AF,UniRef:UniRef100_Q2G127,UniRef:UniRef50_A0A380FX86,UniRef:UniRef90_A0AAN1ZPU7
contig_1	Pyrodigal	gene	400776	401165	.	-	.	ID=GCA000560365_00358_gene;locus_tag=GCA000560365_00358;gene=ybcV
contig_1	Pyrodigal	CDS	400776	401165	.	-	0	ID=GCA000560365_00358;Name=DUF1398 domain-containing protein;locus_tag=GCA000560365_00358;product=DUF1398 domain-containing protein;gene=ybcV;Parent=GCA000560365_00358_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5562,COG:X,RefSeq:WP_000886005.1,SO:0001217,UniParc:UPI0000054574,UniRef:UniRef100_Q2G126,UniRef:UniRef50_Q2G126,UniRef:UniRef90_Q2G126
contig_1	Pyrodigal	gene	401406	401609	.	+	.	ID=GCA000560365_00359_gene;locus_tag=GCA000560365_00359;gene=xRE
contig_1	Pyrodigal	CDS	401406	401609	.	+	0	ID=GCA000560365_00359;Name=HTH cro/C1-type domain-containing protein;locus_tag=GCA000560365_00359;product=HTH cro/C1-type domain-containing protein;gene=xRE;Parent=GCA000560365_00359_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1476,COG:K,RefSeq:WP_001246013.1,SO:0001217,UniParc:UPI00004B5AFE,UniRef:UniRef100_Q2G1V7,UniRef:UniRef50_Q2G1V7,UniRef:UniRef90_Q2G1V7
contig_1	Pyrodigal	gene	401606	402319	.	+	.	ID=GCA000560365_00360_gene;locus_tag=GCA000560365_00360
contig_1	Pyrodigal	CDS	401606	402319	.	+	0	ID=GCA000560365_00360;Name=DUF3169 domain-containing protein;locus_tag=GCA000560365_00360;product=DUF3169 domain-containing protein;Parent=GCA000560365_00360_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000698752.1,SO:0001217,UniParc:UPI0000054572,UniRef:UniRef100_Q2G1V5,UniRef:UniRef50_Q2G1V5,UniRef:UniRef90_Q2G1V5
contig_1	Pyrodigal	gene	402344	403186	.	+	.	ID=GCA000560365_00361_gene;locus_tag=GCA000560365_00361;gene=rbbA
contig_1	Pyrodigal	CDS	402344	403186	.	+	0	ID=GCA000560365_00361;Name=ABC superfamily ATP binding cassette transporter%2C ABC protein;locus_tag=GCA000560365_00361;product=ABC superfamily ATP binding cassette transporter%2C ABC protein;gene=rbbA;Parent=GCA000560365_00361_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1131,COG:JV,RefSeq:WP_000209565.1,SO:0001217,UniParc:UPI00004B5AFF,UniRef:UniRef100_Q2G1V4,UniRef:UniRef50_A0A1D4LL40,UniRef:UniRef90_A0A390TZ70
contig_1	Pyrodigal	gene	403186	403815	.	+	.	ID=GCA000560365_00362_gene;locus_tag=GCA000560365_00362
contig_1	Pyrodigal	CDS	403186	403815	.	+	0	ID=GCA000560365_00362;Name=ABC-2 transporter permease;locus_tag=GCA000560365_00362;product=ABC-2 transporter permease;Parent=GCA000560365_00362_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000677714.1,SO:0001217,UniParc:UPI00004B5B00,UniRef:UniRef100_A0A0D3Q4P4,UniRef:UniRef50_Q2G1V6,UniRef:UniRef90_Q2G1V6
contig_1	Pyrodigal	gene	404182	405315	.	-	.	ID=GCA000560365_00363_gene;locus_tag=GCA000560365_00363;gene=ltrA
contig_1	Pyrodigal	CDS	404182	405315	.	-	0	ID=GCA000560365_00363;Name=Low temperature requirement protein A;locus_tag=GCA000560365_00363;product=Low temperature requirement protein A;gene=ltrA;Parent=GCA000560365_00363_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4292,COG:S,RefSeq:WP_031808135.1,SO:0001217,UniParc:UPI00044730AE,UniRef:UniRef100_UPI00044730AE,UniRef:UniRef50_Q2G1V3,UniRef:UniRef90_Q2G1V3
contig_1	Pyrodigal	gene	405854	407035	.	+	.	ID=GCA000560365_00364_gene;locus_tag=GCA000560365_00364;gene=paaJ
contig_1	Pyrodigal	CDS	405854	407035	.	+	0	ID=GCA000560365_00364;Name=putative acetyl-CoA acyltransferase;locus_tag=GCA000560365_00364;product=putative acetyl-CoA acyltransferase;Dbxref=GO:0003985,GO:0005737;gene=paaJ;Parent=GCA000560365_00364_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0183,COG:I,RefSeq:WP_000199070.1,SO:0001217,UniParc:UPI000005456C,UniRef:UniRef100_Q2G124,UniRef:UniRef50_Q2G124,UniRef:UniRef90_Q2G124;ec_number=2.3.1.9
contig_1	Pyrodigal	gene	407118	407870	.	-	.	ID=GCA000560365_00365_gene;locus_tag=GCA000560365_00365
contig_1	Pyrodigal	CDS	407118	407870	.	-	0	ID=GCA000560365_00365;Name=Cyclase family protein;locus_tag=GCA000560365_00365;product=Cyclase family protein;Parent=GCA000560365_00365_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1878,COG:E,RefSeq:WP_000195907.1,SO:0001217,UniParc:UPI000005456B,UniRef:UniRef100_Q2G123,UniRef:UniRef50_Q2G123,UniRef:UniRef90_Q2G123
contig_1	Pyrodigal	gene	407913	410141	.	-	.	ID=GCA000560365_00366_gene;locus_tag=GCA000560365_00366;gene=metE
contig_1	Pyrodigal	CDS	407913	410141	.	-	0	ID=GCA000560365_00366;Name=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;locus_tag=GCA000560365_00366;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;Dbxref=GO:0003871,GO:0008270,GO:0009086,GO:0032259;gene=metE;Parent=GCA000560365_00366_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0620,COG:E,KEGG:K00549,RefSeq:WP_000207614.1,SO:0001217,UniParc:UPI0000052272,UniRef:UniRef100_Q2G122,UniRef:UniRef50_Q8CWX6,UniRef:UniRef90_Q2G122;ec_number=2.1.1.14
contig_1	Pyrodigal	gene	410138	411979	.	-	.	ID=GCA000560365_00367_gene;locus_tag=GCA000560365_00367;gene=metF
contig_1	Pyrodigal	CDS	410138	411979	.	-	0	ID=GCA000560365_00367;Name=bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase;locus_tag=GCA000560365_00367;product=bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase;gene=metF;Parent=GCA000560365_00367_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0685,COG:E,RefSeq:WP_000077318.1,SO:0001217,UniParc:UPI000005456A,UniRef:UniRef100_Q2G121,UniRef:UniRef50_A0A7U7JSP7,UniRef:UniRef90_A0A7U7JSP7;ec_number=2.1.1.10
contig_1	Pyrodigal	gene	411948	413108	.	-	.	ID=GCA000560365_00368_gene;locus_tag=GCA000560365_00368;gene=metC
contig_1	Pyrodigal	CDS	411948	413108	.	-	0	ID=GCA000560365_00368;Name=cystathionine beta-lyase MetC;locus_tag=GCA000560365_00368;product=cystathionine beta-lyase MetC;Dbxref=GO:0009086,GO:0030170,GO:0047804;gene=metC;Parent=GCA000560365_00368_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0626,COG:E,RefSeq:WP_000175846.1,SO:0001217,UniParc:UPI0000054569,UniRef:UniRef100_Q2G120,UniRef:UniRef50_Q4L332,UniRef:UniRef90_A0A7U7JSH1;ec_number=4.4.1.13
contig_1	Pyrodigal	gene	413105	414208	.	-	.	ID=GCA000560365_00369_gene;locus_tag=GCA000560365_00369;gene=metC
contig_1	Pyrodigal	CDS	413105	414208	.	-	0	ID=GCA000560365_00369;Name=Cystathionine gamma-synthase and O-acetylhomoserine thiolyase;locus_tag=GCA000560365_00369;product=Cystathionine gamma-synthase and O-acetylhomoserine thiolyase;gene=metC;Parent=GCA000560365_00369_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0626,COG:E,RefSeq:WP_000655692.1,SO:0001217,UniParc:UPI0000054568,UniRef:UniRef100_Q2G119,UniRef:UniRef50_A0A7U7JSJ6,UniRef:UniRef90_A0A7U7JSJ6
contig_1	Infernal	regulatory_region	414274	414643	6.3e-14	-	.	ID=KMHODOBJJH_178;Name=T-box leader;product=T-box leader;Dbxref=RFAM:RF00230;inference=profile:Rfam:RF00230;Note=SO:0000140;regulatory_class=attenuator
contig_1	Pyrodigal	gene	414872	415717	.	+	.	ID=GCA000560365_00370_gene;locus_tag=GCA000560365_00370;gene=spo0J
contig_1	Pyrodigal	CDS	414872	415717	.	+	0	ID=GCA000560365_00370;Name=Chromosome/plasmid partitioning protein ParB;locus_tag=GCA000560365_00370;product=Chromosome/plasmid partitioning protein ParB;gene=spo0J;Parent=GCA000560365_00370_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1475,COG:D,KEGG:K03497,RefSeq:WP_001550052.1,SO:0001217,UniParc:UPI00004B5B02,UniRef:UniRef100_Q2G118,UniRef:UniRef50_A0A390ZJY4,UniRef:UniRef90_A0A390ZJY4
contig_1	Pyrodigal	gene	415874	416755	.	+	.	ID=GCA000560365_00371_gene;locus_tag=GCA000560365_00371;gene=mscS
contig_1	Pyrodigal	CDS	415874	416755	.	+	0	ID=GCA000560365_00371;Name=Mechanosensitive ion channel family protein;locus_tag=GCA000560365_00371;product=Mechanosensitive ion channel family protein;gene=mscS;Parent=GCA000560365_00371_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0668,COG:M,RefSeq:WP_001077602.1,SO:0001217,UniParc:UPI0000054565,UniRef:UniRef100_Q2G117,UniRef:UniRef50_Q2G117,UniRef:UniRef90_Q2G117
contig_1	Pyrodigal	gene	416785	416988	.	+	.	ID=GCA000560365_00372_gene;locus_tag=GCA000560365_00372
contig_1	Pyrodigal	CDS	416785	416988	.	+	0	ID=GCA000560365_00372;Name=Cytosolic protein;locus_tag=GCA000560365_00372;product=Cytosolic protein;Parent=GCA000560365_00372_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4481,COG:S,RefSeq:WP_000157345.1,SO:0001217,UniParc:UPI0000054563,UniRef:UniRef100_Q2G116,UniRef:UniRef50_Q2G116,UniRef:UniRef90_Q2G116
contig_1	Pyrodigal	gene	417000	418097	.	+	.	ID=GCA000560365_00373_gene;locus_tag=GCA000560365_00373;gene=ychF
contig_1	Pyrodigal	CDS	417000	418097	.	+	0	ID=GCA000560365_00373;Name=redox-regulated ATPase YchF;locus_tag=GCA000560365_00373;product=redox-regulated ATPase YchF;Dbxref=GO:0005524,GO:0005525,GO:0016887;gene=ychF;Parent=GCA000560365_00373_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0012,COG:J,RefSeq:WP_001218732.1,SO:0001217,UniParc:UPI0000054562,UniRef:UniRef100_Q2G115,UniRef:UniRef50_P0ABU2,UniRef:UniRef90_A0A654CN84
contig_1	Pyrodigal	gene	418183	418374	.	-	.	ID=GCA000560365_00374_gene;locus_tag=GCA000560365_00374
contig_1	Pyrodigal	CDS	418183	418374	.	-	0	ID=GCA000560365_00374;Name=hypothetical protein;locus_tag=GCA000560365_00374;product=hypothetical protein;Parent=GCA000560365_00374_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001052483.1,SO:0001217,UniParc:UPI0000054561,UniRef:UniRef100_Q2G114,UniRef:UniRef50_Q2G114,UniRef:UniRef90_Q2G114
contig_1	Pyrodigal	gene	418618	418914	.	+	.	ID=GCA000560365_00375_gene;locus_tag=GCA000560365_00375;gene=rpsF
contig_1	Pyrodigal	CDS	418618	418914	.	+	0	ID=GCA000560365_00375;Name=30S ribosomal protein S6;locus_tag=GCA000560365_00375;product=30S ribosomal protein S6;Dbxref=GO:0000314,GO:0003735,GO:0005737,GO:0005840,GO:0006412,GO:0022627,GO:0070181,GO:1990904;gene=rpsF;Parent=GCA000560365_00375_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0360,COG:J,KEGG:K02990,RefSeq:WP_001261460.1,SO:0001217,UniParc:UPI0000048022,UniRef:UniRef100_Q2G113,UniRef:UniRef50_P21468,UniRef:UniRef90_Q2G113
contig_1	Pyrodigal	gene	418935	419438	.	+	.	ID=GCA000560365_00376_gene;locus_tag=GCA000560365_00376;gene=ssb
contig_1	Pyrodigal	CDS	418935	419438	.	+	0	ID=GCA000560365_00376;Name=Single-stranded DNA-binding protein 1;locus_tag=GCA000560365_00376;product=Single-stranded DNA-binding protein 1;Dbxref=GO:0003697,GO:0006260,GO:0006281,GO:0006310,GO:0009295;gene=ssb;Parent=GCA000560365_00376_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0629,COG:L,RefSeq:WP_000934799.1,SO:0001217,UniParc:UPI0000054560,UniRef:UniRef100_Q5HIS8,UniRef:UniRef50_Q5HIS8,UniRef:UniRef90_Q5HIS8
contig_1	Pyrodigal	gene	419490	419732	.	+	.	ID=GCA000560365_00377_gene;locus_tag=GCA000560365_00377;gene=rpsR
contig_1	Pyrodigal	CDS	419490	419732	.	+	0	ID=GCA000560365_00377;Name=30S ribosomal protein S18;locus_tag=GCA000560365_00377;product=30S ribosomal protein S18;Dbxref=GO:0000314,GO:0003735,GO:0006412,GO:0022627,GO:0070181;gene=rpsR;Parent=GCA000560365_00377_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0238,COG:J,KEGG:K02963,RefSeq:WP_000897044.1,SO:0001217,UniParc:UPI000004802A,UniRef:UniRef100_Q2G111,UniRef:UniRef50_P21475,UniRef:UniRef90_Q2G111
contig_1	Infernal	gene	419892	419987	.	-	.	ID=GCA000560365_00378_gene;locus_tag=GCA000560365_00378;gene=sau-5971
contig_1	Infernal	ncRNA	419892	419987	1.1e-20	-	.	ID=GCA000560365_00378;Name=Staphylococcus sRNA sau-5971;locus_tag=GCA000560365_00378;product=Staphylococcus sRNA sau-5971;Dbxref=RFAM:RF02397;Parent=GCA000560365_00378_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02397
contig_1	Pyrodigal	gene	419998	420972	.	-	.	ID=GCA000560365_00379_gene;locus_tag=GCA000560365_00379;gene=abiF
contig_1	Pyrodigal	CDS	419998	420972	.	-	0	ID=GCA000560365_00379;Name=Abi family protein;locus_tag=GCA000560365_00379;product=Abi family protein;gene=abiF;Parent=GCA000560365_00379_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4823,COG:V,SO:0001217,UniParc:UPI00015743DE,UniRef:UniRef100_Q2G110,UniRef:UniRef50_Q2G110,UniRef:UniRef90_Q2G110
contig_1	Pyrodigal	gene	420975	421265	.	-	.	ID=GCA000560365_00380_gene;locus_tag=GCA000560365_00380
contig_1	Pyrodigal	CDS	420975	421265	.	-	0	ID=GCA000560365_00380;Name=Integrase-like protein;locus_tag=GCA000560365_00380;product=Integrase-like protein;Parent=GCA000560365_00380_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001699014,UniRef:UniRef100_A0A2X3R8A2,UniRef:UniRef50_A0A2X3R8A2,UniRef:UniRef90_A0A2X3R8A2
contig_1	Pyrodigal	gene	421882	422493	.	+	.	ID=GCA000560365_00381_gene;locus_tag=GCA000560365_00381;gene=selX
contig_1	Pyrodigal	CDS	421882	422493	.	+	0	ID=GCA000560365_00381;Name=staphylococcal enterotoxin-like toxin X;locus_tag=GCA000560365_00381;product=staphylococcal enterotoxin-like toxin X;Dbxref=GO:0005576;gene=selX;Parent=GCA000560365_00381_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=NCBIProtein:AEI60187.1,RefSeq:WP_000475326.1,SO:0001217,UniParc:UPI000005455C,UniRef:UniRef100_Q2G107,UniRef:UniRef50_G0Z026,UniRef:UniRef90_G0Z026
contig_1	Pyrodigal	gene	422862	423230	.	+	.	ID=GCA000560365_00382_gene;locus_tag=GCA000560365_00382;gene=yxeA
contig_1	Pyrodigal	CDS	422862	423230	.	+	0	ID=GCA000560365_00382;Name=YxeA family protein;locus_tag=GCA000560365_00382;product=YxeA family protein;gene=yxeA;Parent=GCA000560365_00382_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000849177.1,SO:0001217,UniParc:UPI00004B5B05,UniRef:UniRef100_Q2G106,UniRef:UniRef50_Q2G106,UniRef:UniRef90_Q2G106
contig_1	Pyrodigal	gene	423411	423983	.	+	.	ID=GCA000560365_00383_gene;locus_tag=GCA000560365_00383;gene=ykoI
contig_1	Pyrodigal	CDS	423411	423983	.	+	0	ID=GCA000560365_00383;Name=PepSY domain-containing protein;locus_tag=GCA000560365_00383;product=PepSY domain-containing protein;gene=ykoI;Parent=GCA000560365_00383_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3212,COG:O,RefSeq:WP_000769720.1,SO:0001217,UniParc:UPI00000522B3,UniRef:UniRef100_Q2G105,UniRef:UniRef50_Q2G105,UniRef:UniRef90_Q2G105
contig_1	Pyrodigal	gene	424121	424384	.	-	.	ID=GCA000560365_00384_gene;locus_tag=GCA000560365_00384
contig_1	Pyrodigal	CDS	424121	424384	.	-	0	ID=GCA000560365_00384;Name=HTH cro/C1-type domain-containing protein;locus_tag=GCA000560365_00384;product=HTH cro/C1-type domain-containing protein;Parent=GCA000560365_00384_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001055897.1,SO:0001217,UniParc:UPI0000054559,UniRef:UniRef100_Q2G104,UniRef:UniRef50_Q2G104,UniRef:UniRef90_Q2G104
contig_1	Pyrodigal	gene	424684	424935	.	+	.	ID=GCA000560365_00385_gene;locus_tag=GCA000560365_00385;gene=yeaQ
contig_1	Pyrodigal	CDS	424684	424935	.	+	0	ID=GCA000560365_00385;Name=GlsB/YeaQ/YmgE family stress response membrane protein;locus_tag=GCA000560365_00385;product=GlsB/YeaQ/YmgE family stress response membrane protein;gene=yeaQ;Parent=GCA000560365_00385_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2261,COG:R,RefSeq:WP_000466748.1,SO:0001217,UniParc:UPI0000054558,UniRef:UniRef100_Q2G103,UniRef:UniRef50_Q2G103,UniRef:UniRef90_Q2G103
contig_1	Infernal	gene	425111	425214	.	-	.	ID=GCA000560365_00386_gene;locus_tag=GCA000560365_00386;gene=sRNA71
contig_1	Infernal	ncRNA	425111	425214	5.5e-16	-	.	ID=GCA000560365_00386;Name=Staphylococcus sRNA71 small RNA;locus_tag=GCA000560365_00386;product=Staphylococcus sRNA71 small RNA;Dbxref=RFAM:RF03534;Parent=GCA000560365_00386_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF03534
contig_1	Pyrodigal	gene	425361	425942	.	+	.	ID=GCA000560365_00387_gene;locus_tag=GCA000560365_00387;gene=phoE
contig_1	Pyrodigal	CDS	425361	425942	.	+	0	ID=GCA000560365_00387;Name=phosphoglycerate mutase (2%2C3-diphosphoglycerate-dependent);locus_tag=GCA000560365_00387;product=phosphoglycerate mutase (2%2C3-diphosphoglycerate-dependent);gene=phoE;Parent=GCA000560365_00387_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0406,COG:G,RefSeq:WP_000158371.1,SO:0001217,UniParc:UPI00015FD6F1,UniRef:UniRef100_A0A5A8VH67,UniRef:UniRef50_A0A380CV51,UniRef:UniRef90_Q2G101
contig_1	Pyrodigal	gene	426008	426394	.	-	.	ID=GCA000560365_00388_gene;locus_tag=GCA000560365_00388
contig_1	Pyrodigal	CDS	426008	426394	.	-	0	ID=GCA000560365_00388;Name=hypothetical protein;locus_tag=GCA000560365_00388;product=hypothetical protein;Parent=GCA000560365_00388_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002B9E232,UniRef:UniRef100_Q2G100,UniRef:UniRef50_A0A2K4AJS7,UniRef:UniRef90_Q2G100
contig_1	Pyrodigal	gene	426646	427272	.	-	.	ID=GCA000560365_00389_gene;locus_tag=GCA000560365_00389
contig_1	Pyrodigal	CDS	426646	427272	.	-	0	ID=GCA000560365_00389;Name=NDxxF motif lipoprotein;locus_tag=GCA000560365_00389;product=NDxxF motif lipoprotein;Parent=GCA000560365_00389_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000746687.1,SO:0001217,UniParc:UPI0000054555,UniRef:UniRef100_Q2G0Z9,UniRef:UniRef50_Q4L374,UniRef:UniRef90_Q2G0Z9
contig_1	Pyrodigal	gene	427345	427602	.	-	.	ID=GCA000560365_00390_gene;locus_tag=GCA000560365_00390
contig_1	Pyrodigal	CDS	427345	427602	.	-	0	ID=GCA000560365_00390;Name=Bacteriocin immunity protein;locus_tag=GCA000560365_00390;product=Bacteriocin immunity protein;Parent=GCA000560365_00390_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001699011,UniRef:UniRef100_Q2G0Z8,UniRef:UniRef50_A0A6A9H4G7,UniRef:UniRef90_Q2G0Z8
contig_1	Pyrodigal	gene	427717	429240	.	-	.	ID=GCA000560365_00391_gene;locus_tag=GCA000560365_00391;gene=ahpF
contig_1	Pyrodigal	CDS	427717	429240	.	-	0	ID=GCA000560365_00391;Name=alkyl hydroperoxide reductase subunit F;locus_tag=GCA000560365_00391;product=alkyl hydroperoxide reductase subunit F;Dbxref=GO:0000302,GO:0008785,GO:0016668,GO:0050660,GO:0051287,GO:0102039;gene=ahpF;Parent=GCA000560365_00391_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3634,COG:V,RefSeq:WP_000930486.1,SO:0001217,UniParc:UPI0000054553,UniRef:UniRef100_O05204,UniRef:UniRef50_O05204,UniRef:UniRef90_O05204;ec_number=1.8.1.-
contig_1	Pyrodigal	gene	429256	429825	.	-	.	ID=GCA000560365_00392_gene;locus_tag=GCA000560365_00392;gene=ahpC
contig_1	Pyrodigal	CDS	429256	429825	.	-	0	ID=GCA000560365_00392;Name=alkyl hydroperoxide reductase subunit C;locus_tag=GCA000560365_00392;product=alkyl hydroperoxide reductase subunit C;Dbxref=GO:0005829,GO:0006979,GO:0008379,GO:0033554,GO:0042744,GO:0045454,GO:0102039;gene=ahpC;Parent=GCA000560365_00392_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0450,COG:V,KEGG:K24119,RefSeq:WP_000052781.1,SO:0001217,UniParc:UPI0000054552,UniRef:UniRef100_P0A0B7,UniRef:UniRef50_K0J4Q8,UniRef:UniRef90_P0A0B7;ec_number=1.11.1.26
contig_1	Pyrodigal	gene	430266	431072	.	+	.	ID=GCA000560365_00393_gene;locus_tag=GCA000560365_00393;gene=nfsA
contig_1	Pyrodigal	CDS	430266	431072	.	+	0	ID=GCA000560365_00393;Name=oxygen-insensitive NADPH nitroreductase;locus_tag=GCA000560365_00393;product=oxygen-insensitive NADPH nitroreductase;Dbxref=GO:0016491;gene=nfsA;Parent=GCA000560365_00393_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0778,SO:0001217,UniParc:UPI00015FD6F2,UniRef:UniRef100_A0A0D6GCI3,UniRef:UniRef50_Q2G0Z5,UniRef:UniRef90_Q2G0Z5;ec_number=1.6.-.-
contig_1	Pyrodigal	gene	431153	432541	.	-	.	ID=GCA000560365_00394_gene;locus_tag=GCA000560365_00394;gene=tcyP
contig_1	Pyrodigal	CDS	431153	432541	.	-	0	ID=GCA000560365_00394;Name=L-cystine uptake protein TcyP;locus_tag=GCA000560365_00394;product=L-cystine uptake protein TcyP;gene=tcyP;Parent=GCA000560365_00394_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1823,COG:E,RefSeq:WP_000991007.1,SO:0001217,UniParc:UPI00004B5B08,UniRef:UniRef100_Q2G0Z4,UniRef:UniRef50_P54596,UniRef:UniRef90_A0A7U7JSI4
contig_1	Pyrodigal	gene	433518	434474	.	-	.	ID=GCA000560365_00395_gene;locus_tag=GCA000560365_00395
contig_1	Pyrodigal	CDS	433518	434474	.	-	0	ID=GCA000560365_00395;Name=putative protein SAV0385;locus_tag=GCA000560365_00395;product=putative protein SAV0385;Parent=GCA000560365_00395_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000956132.1,SO:0001217,UniParc:UPI000005454D,UniRef:UniRef100_Q2G0Z2,UniRef:UniRef50_P60855,UniRef:UniRef90_P60855
contig_1	Pyrodigal	gene	434592	435254	.	-	.	ID=GCA000560365_00396_gene;locus_tag=GCA000560365_00396
contig_1	Pyrodigal	CDS	434592	435254	.	-	0	ID=GCA000560365_00396;Name=N-acetyltransferase domain-containing protein;locus_tag=GCA000560365_00396;product=N-acetyltransferase domain-containing protein;Parent=GCA000560365_00396_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000394698.1,SO:0001217,UniParc:UPI000005454C,UniRef:UniRef100_Q2G0Z1,UniRef:UniRef50_K9B354,UniRef:UniRef90_Q2G0Z1
contig_1	Pyrodigal	gene	435397	435804	.	-	.	ID=GCA000560365_00397_gene;locus_tag=GCA000560365_00397
contig_1	Pyrodigal	CDS	435397	435804	.	-	0	ID=GCA000560365_00397;Name=UPF0355 protein MW0363;locus_tag=GCA000560365_00397;product=UPF0355 protein MW0363;Parent=GCA000560365_00397_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000763768.1,SO:0001217,UniParc:UPI000005454B,UniRef:UniRef100_Q5HIR0,UniRef:UniRef50_Q4L382,UniRef:UniRef90_Q99WJ2
contig_1	Infernal	regulatory_region	435984	436086	7.8e-11	+	.	ID=KMHODOBJJH_186;Name=Purine riboswitch aptamer;product=Purine riboswitch aptamer;Dbxref=RFAM:RF00167;inference=profile:Rfam:RF00167;Note=SO:0000035;regulatory_class=riboswitch
contig_1	Pyrodigal	gene	436317	436895	.	+	.	ID=GCA000560365_00398_gene;locus_tag=GCA000560365_00398;gene=xpt
contig_1	Pyrodigal	CDS	436317	436895	.	+	0	ID=GCA000560365_00398;Name=xanthine phosphoribosyltransferase;locus_tag=GCA000560365_00398;product=xanthine phosphoribosyltransferase;Dbxref=GO:0000310,GO:0005737,GO:0006166,GO:0032265,GO:0043101,GO:0046110;gene=xpt;Parent=GCA000560365_00398_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0503,COG:F,KEGG:K03816,RefSeq:WP_000421410.1,SO:0001217,UniParc:UPI00000D77B2,UniRef:UniRef100_Q2G0Y9,UniRef:UniRef50_Q2G0Y9,UniRef:UniRef90_Q2G0Y9;ec_number=2.4.2.22
contig_1	Pyrodigal	gene	436895	438163	.	+	.	ID=GCA000560365_00399_gene;locus_tag=GCA000560365_00399;gene=uraA
contig_1	Pyrodigal	CDS	436895	438163	.	+	0	ID=GCA000560365_00399;Name=Xanthine permease;locus_tag=GCA000560365_00399;product=Xanthine permease;gene=uraA;Parent=GCA000560365_00399_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2233,COG:F,RefSeq:WP_000793009.1,SO:0001217,UniParc:UPI0000054549,UniRef:UniRef100_Q2G0Y8,UniRef:UniRef50_P42086,UniRef:UniRef90_A0A1J6I5H8
contig_1	Pyrodigal	gene	438201	439667	.	+	.	ID=GCA000560365_00400_gene;locus_tag=GCA000560365_00400;gene=guaB
contig_1	Pyrodigal	CDS	438201	439667	.	+	0	ID=GCA000560365_00400;Name=IMP dehydrogenase;locus_tag=GCA000560365_00400;product=IMP dehydrogenase;Dbxref=GO:0000166,GO:0003938,GO:0006164,GO:0006177,GO:0006183,GO:0046872;gene=guaB;Parent=GCA000560365_00400_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3448,COG:T,KEGG:K00088,RefSeq:WP_031808136.1,SO:0001217,UniParc:UPI000447E682,UniRef:UniRef100_UPI000447E682,UniRef:UniRef50_Q2G0Y7,UniRef:UniRef90_Q2G0Y7;ec_number=1.1.1.205
contig_1	Pyrodigal	gene	439692	441233	.	+	.	ID=GCA000560365_00401_gene;locus_tag=GCA000560365_00401;gene=guaA
contig_1	Pyrodigal	CDS	439692	441233	.	+	0	ID=GCA000560365_00401;Name=glutamine-hydrolyzing GMP synthase;locus_tag=GCA000560365_00401;product=glutamine-hydrolyzing GMP synthase;Dbxref=GO:0003921,GO:0003922,GO:0005524,GO:0005829,GO:0006177,GO:0016462;gene=guaA;Parent=GCA000560365_00401_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0519,COG:F,KEGG:K01951,RefSeq:WP_000424966.1,SO:0001217,UniParc:UPI0000054547,UniRef:UniRef100_Q2G0Y6,UniRef:UniRef50_Q2G0Y6,UniRef:UniRef90_Q2G0Y6;ec_number=6.3.5.2
contig_1	Pyrodigal	gene	441346	441882	.	-	.	ID=GCA000560365_00402_gene;locus_tag=GCA000560365_00402
contig_1	Pyrodigal	CDS	441346	441882	.	-	0	ID=GCA000560365_00402;Name=Phage protein;locus_tag=GCA000560365_00402;product=Phage protein;Parent=GCA000560365_00402_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000551776.1,SO:0001217,UniParc:UPI0000054545,UniRef:UniRef100_Q2G0Y5,UniRef:UniRef50_Q2G0Y5,UniRef:UniRef90_Q2G0Y5
contig_1	Infernal	gene	442146	442243	.	-	.	ID=GCA000560365_00403_gene;locus_tag=GCA000560365_00403;gene=sau-63
contig_1	Infernal	ncRNA	442146	442243	1.2e-23	-	.	ID=GCA000560365_00403;Name=Staphylococcus sRNA sau-63;locus_tag=GCA000560365_00403;product=Staphylococcus sRNA sau-63;Dbxref=RFAM:RF02394;Parent=GCA000560365_00403_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02394
contig_1	Pyrodigal	gene	442275	442979	.	-	.	ID=GCA000560365_00404_gene;locus_tag=GCA000560365_00404;gene=mazF
contig_1	Pyrodigal	CDS	442275	442979	.	-	0	ID=GCA000560365_00404;Name=Endoribonuclease MazF;locus_tag=GCA000560365_00404;product=Endoribonuclease MazF;gene=mazF;Parent=GCA000560365_00404_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000041883.1,SO:0001217,UniParc:UPI0000054544,UniRef:UniRef100_Q2G0Y4,UniRef:UniRef50_A0A389Q5H3,UniRef:UniRef90_A0A389Q5H3
contig_1	Pyrodigal	gene	443378	443650	.	-	.	ID=GCA000560365_00405_gene;locus_tag=GCA000560365_00405;gene=insE
contig_1	Pyrodigal	CDS	443378	443650	.	-	0	ID=GCA000560365_00405;Name=Transposase;locus_tag=GCA000560365_00405;product=Transposase;gene=insE;Parent=GCA000560365_00405_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2963,COG:X,RefSeq:WP_000159787.1,SO:0001217,UniParc:UPI0000054543,UniRef:UniRef100_Q2G0Y3,UniRef:UniRef50_Q2G0Y3,UniRef:UniRef90_Q2G0Y3
contig_1	Pyrodigal	gene	443911	444063	.	-	.	ID=GCA000560365_00406_gene;locus_tag=GCA000560365_00406
contig_1	Pyrodigal	CDS	443911	444063	.	-	0	ID=GCA000560365_00406;Name=hypothetical protein;locus_tag=GCA000560365_00406;product=hypothetical protein;Parent=GCA000560365_00406_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000248839.1,SO:0001217,UniParc:UPI00004B5B09,UniRef:UniRef100_X5EGX9,UniRef:UniRef50_A0A6B1RMS0,UniRef:UniRef90_A0A2S6DG16
contig_1	Infernal	regulatory_region	444282	444341	3.7e-17	+	.	ID=KMHODOBJJH_172;Name=Staphylococcus aureus small RNA TEG147;product=Staphylococcus aureus small RNA TEG147;Dbxref=RFAM:RF03535;inference=profile:Rfam:RF03535;Note=SO:0005836;regulatory_class=other
contig_1	Pyrodigal	gene	444587	444946	.	-	.	ID=GCA000560365_00407_gene;locus_tag=GCA000560365_00407
contig_1	Pyrodigal	CDS	444587	444946	.	-	0	ID=GCA000560365_00407;Name=DUF1304 domain-containing protein;locus_tag=GCA000560365_00407;product=DUF1304 domain-containing protein;Parent=GCA000560365_00407_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3759,COG:S,KEGG:K08987,RefSeq:WP_001021622.1,SO:0001217,UniParc:UPI00004B5B0A,UniRef:UniRef100_Q2G0Y1,UniRef:UniRef50_Q2G0Y1,UniRef:UniRef90_Q2G0Y1
contig_1	Pyrodigal	gene	444965	445810	.	-	.	ID=GCA000560365_00408_gene;locus_tag=GCA000560365_00408;gene=ybjT
contig_1	Pyrodigal	CDS	444965	445810	.	-	0	ID=GCA000560365_00408;Name=Cobalt (Co2+) ABC superfamily ATP binding cassette transporter%2C membrane protein;locus_tag=GCA000560365_00408;product=Cobalt (Co2+) ABC superfamily ATP binding cassette transporter%2C membrane protein;gene=ybjT;Parent=GCA000560365_00408_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0702,COG:R,RefSeq:WP_001024377.1,SO:0001217,UniParc:UPI0000054540,UniRef:UniRef100_Q2G0Y0,UniRef:UniRef50_A0A0D0RS60,UniRef:UniRef90_A0A391A2R3
contig_1	Pyrodigal	gene	446282	446962	.	+	.	ID=GCA000560365_00409_gene;locus_tag=GCA000560365_00409;gene=ssl1
contig_1	Pyrodigal	CDS	446282	446962	.	+	0	ID=GCA000560365_00409;Name=superantigen-like protein SSL1;locus_tag=GCA000560365_00409;product=superantigen-like protein SSL1;Dbxref=GO:0005576,GO:0006508,GO:0008233;gene=ssl1;Parent=GCA000560365_00409_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K11042,RefSeq:WP_000669005.1,SO:0001217,UniParc:UPI00004B5B0B,UniRef:UniRef100_Q2G0X9,UniRef:UniRef50_Q2G0X9,UniRef:UniRef90_Q2G0X9;ec_number=3.4.21.-
contig_1	Pyrodigal	gene	447248	447943	.	+	.	ID=GCA000560365_00410_gene;locus_tag=GCA000560365_00410;gene=set17
contig_1	Pyrodigal	CDS	447248	447943	.	+	0	ID=GCA000560365_00410;Name=superantigen-like protein SSL2;locus_tag=GCA000560365_00410;product=superantigen-like protein SSL2;gene=set17;Parent=GCA000560365_00410_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000782618.1,SO:0001217,UniParc:UPI00000522B4,UniRef:UniRef100_Q2G0X8,UniRef:UniRef50_Q2G0X8,UniRef:UniRef90_Q2G0X8,VFDB:VFC0235,VFDB:VFG004928
contig_1	Pyrodigal	gene	448234	449292	.	+	.	ID=GCA000560365_00411_gene;locus_tag=GCA000560365_00411;gene=set18
contig_1	Pyrodigal	CDS	448234	449292	.	+	0	ID=GCA000560365_00411;Name=superantigen-like protein SSL3;locus_tag=GCA000560365_00411;product=superantigen-like protein SSL3;Dbxref=GO:0005576;gene=set18;Parent=GCA000560365_00411_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000784024.1,SO:0001217,UniParc:UPI0000052313,UniRef:UniRef100_A0A0H3KEE1,UniRef:UniRef50_Q2G0X7,UniRef:UniRef90_Q2G0X7,VFDB:VFC0235,VFDB:VFG004925
contig_1	Pyrodigal	gene	449657	450583	.	+	.	ID=GCA000560365_00412_gene;locus_tag=GCA000560365_00412;gene=set19
contig_1	Pyrodigal	CDS	449657	450583	.	+	0	ID=GCA000560365_00412;Name=superantigen-like protein SSL4;locus_tag=GCA000560365_00412;product=superantigen-like protein SSL4;Dbxref=GO:0005576;gene=set19;Parent=GCA000560365_00412_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000705644.1,SO:0001217,UniParc:UPI0000696BA9,UniRef:UniRef100_A0A0H3K6A3,UniRef:UniRef50_Q2G0X7,UniRef:UniRef90_Q2G1S8,VFDB:VFC0235,VFDB:VFG004922
contig_1	Pyrodigal	gene	450947	451651	.	+	.	ID=GCA000560365_00413_gene;locus_tag=GCA000560365_00413;gene=set20
contig_1	Pyrodigal	CDS	450947	451651	.	+	0	ID=GCA000560365_00413;Name=superantigen-like protein SSL5;locus_tag=GCA000560365_00413;product=superantigen-like protein SSL5;Dbxref=GO:0005576;gene=set20;Parent=GCA000560365_00413_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K23587,RefSeq:WP_000784244.1,SO:0001217,UniParc:UPI0000696BAA,UniRef:UniRef100_Q2G1S6,UniRef:UniRef50_Q2G1S6,UniRef:UniRef90_Q2G1S6,VFDB:VFC0235,VFDB:VFG004920
contig_1	Pyrodigal	gene	452097	452792	.	+	.	ID=GCA000560365_00414_gene;locus_tag=GCA000560365_00414
contig_1	Pyrodigal	CDS	452097	452792	.	+	0	ID=GCA000560365_00414;Name=superantigen-like protein SSL6;locus_tag=GCA000560365_00414;product=superantigen-like protein SSL6;Parent=GCA000560365_00414_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000769845.1,SO:0001217,UniParc:UPI0000054539,UniRef:UniRef100_Q2G1S5,UniRef:UniRef50_Q2G1S5,UniRef:UniRef90_Q2G1S5
contig_1	Pyrodigal	gene	453213	453908	.	+	.	ID=GCA000560365_00415_gene;locus_tag=GCA000560365_00415;gene=set22
contig_1	Pyrodigal	CDS	453213	453908	.	+	0	ID=GCA000560365_00415;Name=superantigen-like protein SSL7;locus_tag=GCA000560365_00415;product=superantigen-like protein SSL7;Dbxref=GO:0005576;gene=set22;Parent=GCA000560365_00415_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000769836.1,SO:0001217,UniParc:UPI00000B2912,UniRef:UniRef100_Q2G2Y0,UniRef:UniRef50_Q2G2Y0,UniRef:UniRef90_Q2G2Y0,VFDB:VFC0235,VFDB:VFG004915
contig_1	Pyrodigal	gene	454252	454950	.	+	.	ID=GCA000560365_00416_gene;locus_tag=GCA000560365_00416;gene=set23
contig_1	Pyrodigal	CDS	454252	454950	.	+	0	ID=GCA000560365_00416;Name=superantigen-like protein SSL8;locus_tag=GCA000560365_00416;product=superantigen-like protein SSL8;gene=set23;Parent=GCA000560365_00416_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000673479.1,SO:0001217,UniParc:UPI0000696BAB,UniRef:UniRef100_Q2G2X9,UniRef:UniRef50_Q2G2X9,UniRef:UniRef90_Q2G2X9,VFDB:VFC0235,VFDB:VFG004912
contig_1	Pyrodigal	gene	455330	456028	.	+	.	ID=GCA000560365_00417_gene;locus_tag=GCA000560365_00417;gene=set24
contig_1	Pyrodigal	CDS	455330	456028	.	+	0	ID=GCA000560365_00417;Name=superantigen-like protein SSL9;locus_tag=GCA000560365_00417;product=superantigen-like protein SSL9;gene=set24;Parent=GCA000560365_00417_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000779446.1,SO:0001217,UniParc:UPI00004B5B0C,UniRef:UniRef100_Q2G2X8,UniRef:UniRef50_Q2G2X9,UniRef:UniRef90_Q2G2X8,VFDB:VFC0235,VFDB:VFG004909
contig_1	Pyrodigal	gene	456394	457077	.	+	.	ID=GCA000560365_00418_gene;locus_tag=GCA000560365_00418;gene=set25
contig_1	Pyrodigal	CDS	456394	457077	.	+	0	ID=GCA000560365_00418;Name=superantigen-like protein SSL10;locus_tag=GCA000560365_00418;product=superantigen-like protein SSL10;Dbxref=GO:0005576;gene=set25;Parent=GCA000560365_00418_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000673051.1,SO:0001217,UniParc:UPI00000CAB82,UniRef:UniRef100_Q2G2X7,UniRef:UniRef50_Q2G2X7,UniRef:UniRef90_Q2G2X7,VFDB:VFC0235,VFDB:VFG004906
contig_1	Pyrodigal	gene	457341	458897	.	+	.	ID=GCA000560365_00419_gene;locus_tag=GCA000560365_00419;gene=hsdM
contig_1	Pyrodigal	CDS	457341	458897	.	+	0	ID=GCA000560365_00419;Name=type I restriction-modification system subunit M;locus_tag=GCA000560365_00419;product=type I restriction-modification system subunit M;Dbxref=GO:0003677,GO:0009007,GO:0009307;gene=hsdM;Parent=GCA000560365_00419_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0286,COG:V,KEGG:K03427,RefSeq:WP_000028628.1,SO:0001217,UniParc:UPI0000054532,UniRef:UniRef100_Q2G0X6,UniRef:UniRef50_B1BVR9,UniRef:UniRef90_A0A0H3JSX7;ec_number=2.1.1.72
contig_1	Pyrodigal	gene	458890	460101	.	+	.	ID=GCA000560365_00420_gene;locus_tag=GCA000560365_00420;gene=hsdS
contig_1	Pyrodigal	CDS	458890	460101	.	+	0	ID=GCA000560365_00420;Name=Restriction endonuclease subunit S;locus_tag=GCA000560365_00420;product=Restriction endonuclease subunit S;gene=hsdS;Parent=GCA000560365_00420_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0732,COG:V,KEGG:K01154,RefSeq:WP_000072584.1,SO:0001217,UniParc:UPI0000054531,UniRef:UniRef100_Q2G0X5,UniRef:UniRef50_B0FFT9,UniRef:UniRef90_A0A6G4Q6L6;ec_number=3.1.21.3
contig_1	Pyrodigal	gene	460484	461161	.	+	.	ID=GCA000560365_00421_gene;locus_tag=GCA000560365_00421;gene=ssl11
contig_1	Pyrodigal	CDS	460484	461161	.	+	0	ID=GCA000560365_00421;Name=superantigen-like protein SSL11;locus_tag=GCA000560365_00421;product=superantigen-like protein SSL11;Dbxref=GO:0005576;gene=ssl11;Parent=GCA000560365_00421_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K23587,RefSeq:WP_000769163.1,SO:0001217,UniParc:UPI0000054530,UniRef:UniRef100_Q2G0X4,UniRef:UniRef50_A8E1U5,UniRef:UniRef90_Q2G0X4
contig_1	Pyrodigal	gene	461183	462691	.	+	.	ID=GCA000560365_00422_gene;locus_tag=GCA000560365_00422
contig_1	Pyrodigal	CDS	461183	462691	.	+	0	ID=GCA000560365_00422;Name=FKLRK protein;locus_tag=GCA000560365_00422;product=FKLRK protein;Parent=GCA000560365_00422_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001208887,BlastRules:WP_001208912,BlastRules:WP_001208927,RefSeq:WP_001208912.1,SO:0001217,UniParc:UPI000005452F,UniRef:UniRef100_Q2G0X3,UniRef:UniRef50_A0A418JJR9,UniRef:UniRef90_Q2G0X3
contig_1	Pyrodigal	gene	462794	463102	.	-	.	ID=GCA000560365_00423_gene;locus_tag=GCA000560365_00423;gene=spn
contig_1	Pyrodigal	CDS	462794	463102	.	-	0	ID=GCA000560365_00423;Name=myeloperoxidase inhibitor SPIN;locus_tag=GCA000560365_00423;product=myeloperoxidase inhibitor SPIN;gene=spn;Parent=GCA000560365_00423_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001667246,RefSeq:WP_000669519.1,SO:0001217,UniParc:UPI00000C7F58,UniRef:UniRef100_Q2G0X2,UniRef:UniRef50_A0A2A4GXB5,UniRef:UniRef90_Q2G0X2
contig_1	Pyrodigal	gene	463440	464243	.	+	.	ID=GCA000560365_00424_gene;locus_tag=GCA000560365_00424;gene=lpl1
contig_1	Pyrodigal	CDS	463440	464243	.	+	0	ID=GCA000560365_00424;Name=tandem-type lipoprotein Lpl1;locus_tag=GCA000560365_00424;product=tandem-type lipoprotein Lpl1;Dbxref=GO:0005886;gene=lpl1;Parent=GCA000560365_00424_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_047335196,SO:0001217,UniParc:UPI0000696BAC,UniRef:UniRef100_Q2FJK4,UniRef:UniRef50_Q7A7G6,UniRef:UniRef90_Q2FJK4
contig_1	Pyrodigal	gene	464274	465074	.	+	.	ID=GCA000560365_00425_gene;locus_tag=GCA000560365_00425;gene=lpl2
contig_1	Pyrodigal	CDS	464274	465074	.	+	0	ID=GCA000560365_00425;Name=tandem-type lipoprotein Lpl2;locus_tag=GCA000560365_00425;product=tandem-type lipoprotein Lpl2;Dbxref=GO:0005886;gene=lpl2;Parent=GCA000560365_00425_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001269759,RefSeq:WP_001269759.1,SO:0001217,UniParc:UPI0000696BAD,UniRef:UniRef100_Q2FJK3,UniRef:UniRef50_Q7A7G6,UniRef:UniRef90_Q2FJK3
contig_1	Pyrodigal	gene	465093	465566	.	+	.	ID=GCA000560365_00426_gene;locus_tag=GCA000560365_00426
contig_1	Pyrodigal	CDS	465093	465566	.	+	0	ID=GCA000560365_00426;Name=Tandem lipoprotein;locus_tag=GCA000560365_00426;product=Tandem lipoprotein;Parent=GCA000560365_00426_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00015743F2,UniRef:UniRef100_A0A0D6G9J2,UniRef:UniRef50_A0A380DLS6,UniRef:UniRef90_A0A0D6G9J2
contig_1	Pyrodigal	gene	465946	466749	.	+	.	ID=GCA000560365_00427_gene;locus_tag=GCA000560365_00427;gene=lpl4
contig_1	Pyrodigal	CDS	465946	466749	.	+	0	ID=GCA000560365_00427;Name=tandem-type lipoprotein Lpl4;locus_tag=GCA000560365_00427;product=tandem-type lipoprotein Lpl4;Dbxref=GO:0005886;gene=lpl4;Parent=GCA000560365_00427_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000971990,RefSeq:WP_000971990.1,SO:0001217,UniParc:UPI0000696BAE,UniRef:UniRef100_Q2FJK2,UniRef:UniRef50_Q7A7G6,UniRef:UniRef90_Q2FJK2
contig_1	Pyrodigal	gene	466768	467538	.	+	.	ID=GCA000560365_00428_gene;locus_tag=GCA000560365_00428;gene=lpl5
contig_1	Pyrodigal	CDS	466768	467538	.	+	0	ID=GCA000560365_00428;Name=tandem-type lipoprotein Lpl5;locus_tag=GCA000560365_00428;product=tandem-type lipoprotein Lpl5;Dbxref=GO:0005886;gene=lpl5;Parent=GCA000560365_00428_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000835992,RefSeq:WP_000835991.1,SO:0001217,UniParc:UPI00015FD701,UniRef:UniRef100_A0A1S5Z0L0,UniRef:UniRef50_Q7A7G6,UniRef:UniRef90_Q5HIN6
contig_1	Pyrodigal	gene	467570	468361	.	+	.	ID=GCA000560365_00429_gene;locus_tag=GCA000560365_00429;gene=lpl6
contig_1	Pyrodigal	CDS	467570	468361	.	+	0	ID=GCA000560365_00429;Name=tandem-type lipoprotein Lpl6;locus_tag=GCA000560365_00429;product=tandem-type lipoprotein Lpl6;Dbxref=GO:0005886;gene=lpl6;Parent=GCA000560365_00429_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000456139,RefSeq:WP_000456139.1,SO:0001217,UniParc:UPI0000696BB0,UniRef:UniRef100_Q2FJK0,UniRef:UniRef50_Q2YVQ6,UniRef:UniRef90_Q2YVQ6
contig_1	Pyrodigal	gene	468431	469207	.	+	.	ID=GCA000560365_00430_gene;locus_tag=GCA000560365_00430;gene=lpl7
contig_1	Pyrodigal	CDS	468431	469207	.	+	0	ID=GCA000560365_00430;Name=tandem-type lipoprotein Lpl7;locus_tag=GCA000560365_00430;product=tandem-type lipoprotein Lpl7;Dbxref=GO:0005886;gene=lpl7;Parent=GCA000560365_00430_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000649608,RefSeq:WP_000649608.1,SO:0001217,UniParc:UPI00004B5B11,UniRef:UniRef100_Q2FJJ9,UniRef:UniRef50_Q2YVQ6,UniRef:UniRef90_Q2FJJ9
contig_1	Pyrodigal	gene	469383	470198	.	+	.	ID=GCA000560365_00431_gene;locus_tag=GCA000560365_00431;gene=lpl8
contig_1	Pyrodigal	CDS	469383	470198	.	+	0	ID=GCA000560365_00431;Name=tandem-type lipoprotein Lpl8;locus_tag=GCA000560365_00431;product=tandem-type lipoprotein Lpl8;Dbxref=GO:0005886;gene=lpl8;Parent=GCA000560365_00431_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001797296,SO:0001217,UniParc:UPI00004B5B12,UniRef:UniRef100_Q2FJJ8,UniRef:UniRef50_Q7A7G6,UniRef:UniRef90_Q2G0X1
contig_1	Pyrodigal	gene	470217	471002	.	+	.	ID=GCA000560365_00432_gene;locus_tag=GCA000560365_00432;gene=lpl9
contig_1	Pyrodigal	CDS	470217	471002	.	+	0	ID=GCA000560365_00432;Name=tandem-type lipoprotein Lpl9;locus_tag=GCA000560365_00432;product=tandem-type lipoprotein Lpl9;Dbxref=GO:0005886;gene=lpl9;Parent=GCA000560365_00432_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000835976,RefSeq:WP_000835976.1,SO:0001217,UniParc:UPI000005452C,UniRef:UniRef100_Q2G0X0,UniRef:UniRef50_Q2G0X0,UniRef:UniRef90_Q2G0X0
contig_1	Pyrodigal	gene	471182	471997	.	+	.	ID=GCA000560365_00433_gene;locus_tag=GCA000560365_00433;gene=lpl10
contig_1	Pyrodigal	CDS	471182	471997	.	+	0	ID=GCA000560365_00433;Name=tandem-type lipoprotein Lpl10;locus_tag=GCA000560365_00433;product=tandem-type lipoprotein Lpl10;Dbxref=GO:0005886;gene=lpl10;Parent=GCA000560365_00433_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001801842,SO:0001217,UniParc:UPI00015FD702,UniRef:UniRef100_Q2FJJ6,UniRef:UniRef50_Q7A7G6,UniRef:UniRef90_Q2G0W9
contig_1	Pyrodigal	gene	471987	473315	.	+	.	ID=GCA000560365_00434_gene;locus_tag=GCA000560365_00434
contig_1	Pyrodigal	CDS	471987	473315	.	+	0	ID=GCA000560365_00434;Name=Cytosolic protein;locus_tag=GCA000560365_00434;product=Cytosolic protein;Parent=GCA000560365_00434_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000952537.1,SO:0001217,UniParc:UPI0000696BB2,UniRef:UniRef100_Q2G0W8,UniRef:UniRef50_A0A6A9GY48,UniRef:UniRef90_Q2G0W8
contig_1	Pyrodigal	gene	473312	473635	.	+	.	ID=GCA000560365_00435_gene;locus_tag=GCA000560365_00435
contig_1	Pyrodigal	CDS	473312	473635	.	+	0	ID=GCA000560365_00435;Name=Cytosolic protein;locus_tag=GCA000560365_00435;product=Cytosolic protein;Parent=GCA000560365_00435_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000971498.1,SO:0001217,UniParc:UPI0000054529,UniRef:UniRef100_Q2G0W7,UniRef:UniRef50_Q2G0W7,UniRef:UniRef90_Q2G0W7
contig_1	Pyrodigal	gene	473654	473968	.	+	.	ID=GCA000560365_00436_gene;locus_tag=GCA000560365_00436
contig_1	Pyrodigal	CDS	473654	473968	.	+	0	ID=GCA000560365_00436;Name=hypothetical protein;locus_tag=GCA000560365_00436;product=hypothetical protein;Parent=GCA000560365_00436_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000172543.1,SO:0001217,UniParc:UPI0000054527,UniRef:UniRef100_Q2G0W6,UniRef:UniRef50_Q2G0W6,UniRef:UniRef90_Q2G0W6
contig_1	Pyrodigal	gene	474258	474452	.	-	.	ID=GCA000560365_00437_gene;locus_tag=GCA000560365_00437
contig_1	Pyrodigal	CDS	474258	474452	.	-	0	ID=GCA000560365_00437;Name=hypothetical protein;locus_tag=GCA000560365_00437;product=hypothetical protein;Parent=GCA000560365_00437_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00015743F5,UniRef:UniRef100_Q2G0W5,UniRef:UniRef50_Q2G0W5,UniRef:UniRef90_Q2G0W5
contig_1	Pyrodigal	gene	474637	475839	.	+	.	ID=GCA000560365_00438_gene;locus_tag=GCA000560365_00438;gene=yejR
contig_1	Pyrodigal	CDS	474637	475839	.	+	0	ID=GCA000560365_00438;Name=CobW C-terminal domain-containing protein;locus_tag=GCA000560365_00438;product=CobW C-terminal domain-containing protein;gene=yejR;Parent=GCA000560365_00438_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0523,COG:R,RefSeq:WP_001062982.1,SO:0001217,UniParc:UPI0000054525,UniRef:UniRef100_Q2G0W4,UniRef:UniRef50_P94400,UniRef:UniRef90_Q2G0W4
contig_1	Infernal	gene	476433	476588	.	-	.	ID=GCA000560365_00439_gene;locus_tag=GCA000560365_00439;gene=sau-41
contig_1	Infernal	ncRNA	476433	476588	7.8e-31	-	.	ID=GCA000560365_00439;Name=Staphylococcus sRNA sau-41;locus_tag=GCA000560365_00439;product=Staphylococcus sRNA sau-41;Dbxref=RFAM:RF02390;Parent=GCA000560365_00439_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02390
contig_1	Bakta	gene	476498	476560	.	-	.	ID=GCA000560365_00440_gene;locus_tag=GCA000560365_00440;inference=ab initio prediction:Bakta;gene=psmA4
contig_1	Bakta	CDS	476498	476560	.	-	0	ID=GCA000560365_00440;Name=Phenol-soluble modulin alpha 4 peptide;locus_tag=GCA000560365_00440;product=Phenol-soluble modulin alpha 4 peptide;Dbxref=GO:0031640;gene=psmA4;Parent=GCA000560365_00440_gene;Note=RefSeq:WP_014532416.1,SO:0001217,UniParc:UPI000161A44A,UniRef:UniRef100_P0C818,UniRef:UniRef50_P0C818,UniRef:UniRef90_P0C818
contig_1	Bakta	gene	476624	476692	.	-	.	ID=GCA000560365_00441_gene;locus_tag=GCA000560365_00441;inference=ab initio prediction:Bakta;gene=psmA3
contig_1	Bakta	CDS	476624	476692	.	-	0	ID=GCA000560365_00441;Name=Phenol-soluble modulin alpha 3 peptide;locus_tag=GCA000560365_00441;product=Phenol-soluble modulin alpha 3 peptide;Dbxref=GO:0031640;gene=psmA3;Parent=GCA000560365_00441_gene;Note=RefSeq:WP_014373779.1,SO:0001217,UniParc:UPI000161A449,UniRef:UniRef100_P0C805,UniRef:UniRef50_P0C805,UniRef:UniRef90_P0C805
contig_1	Bakta	gene	476744	476809	.	-	.	ID=GCA000560365_00442_gene;locus_tag=GCA000560365_00442;inference=ab initio prediction:Bakta;gene=psmA2
contig_1	Bakta	CDS	476744	476809	.	-	0	ID=GCA000560365_00442;Name=Phenol-soluble modulin alpha 2 peptide;locus_tag=GCA000560365_00442;product=Phenol-soluble modulin alpha 2 peptide;Dbxref=GO:0031640;gene=psmA2;Parent=GCA000560365_00442_gene;Note=RefSeq:WP_014373780.1,SO:0001217,UniParc:UPI00015FD703,UniRef:UniRef100_P0C7Z3,UniRef:UniRef50_P0C7Z3,UniRef:UniRef90_P0C7Z3
contig_1	Bakta	gene	476841	476906	.	-	.	ID=GCA000560365_00443_gene;locus_tag=GCA000560365_00443;inference=ab initio prediction:Bakta;gene=psmA1
contig_1	Bakta	CDS	476841	476906	.	-	0	ID=GCA000560365_00443;Name=Phenol-soluble modulin alpha 1 peptide;locus_tag=GCA000560365_00443;product=Phenol-soluble modulin alpha 1 peptide;Dbxref=GO:0031640;gene=psmA1;Parent=GCA000560365_00443_gene;Note=RefSeq:WP_014373781.1,SO:0001217,UniParc:UPI00015FD704,UniRef:UniRef100_P0C7Y1,UniRef:UniRef50_P0C7Y1,UniRef:UniRef90_P0C7Y1
contig_1	Pyrodigal	gene	477427	478911	.	+	.	ID=GCA000560365_00444_gene;locus_tag=GCA000560365_00444;gene=nuoL
contig_1	Pyrodigal	CDS	477427	478911	.	+	0	ID=GCA000560365_00444;Name=NADH dehydrogenase subunit 5;locus_tag=GCA000560365_00444;product=NADH dehydrogenase subunit 5;gene=nuoL;Parent=GCA000560365_00444_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1009,RefSeq:WP_000948279.1,SO:0001217,UniParc:UPI0000696BB3,UniRef:UniRef100_Q2G0W2,UniRef:UniRef50_Q2G0W2,UniRef:UniRef90_Q2G0W2;ec_number=1.6.5.9
contig_1	Pyrodigal	gene	478924	481629	.	+	.	ID=GCA000560365_00445_gene;locus_tag=GCA000560365_00445;gene=dabA
contig_1	Pyrodigal	CDS	478924	481629	.	+	0	ID=GCA000560365_00445;Name=putative inorganic carbon transporter subunit DabA;locus_tag=GCA000560365_00445;product=putative inorganic carbon transporter subunit DabA;Dbxref=GO:0005886,GO:0008270;gene=dabA;Parent=GCA000560365_00445_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG3002,KEGG:K09822,RefSeq:WP_000211543.1,SO:0001217,UniParc:UPI0000696BB4,UniRef:UniRef100_Q2FJI9,UniRef:UniRef50_Q2G0W1,UniRef:UniRef90_Q2G0W1
contig_1	Pyrodigal	gene	481791	482153	.	+	.	ID=GCA000560365_00446_gene;locus_tag=GCA000560365_00446;gene=mpsC
contig_1	Pyrodigal	CDS	481791	482153	.	+	0	ID=GCA000560365_00446;Name=Na+-translocating membrane putative-generating system MpsC domain-containing protein;locus_tag=GCA000560365_00446;product=Na+-translocating membrane putative-generating system MpsC domain-containing protein;gene=mpsC;Parent=GCA000560365_00446_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG5609,RefSeq:WP_000831495.1,SO:0001217,UniParc:UPI000005451F,UniRef:UniRef100_Q2G0W0,UniRef:UniRef50_A0A7U7PXA8,UniRef:UniRef90_A0A7U7PXA8
contig_1	Pyrodigal	gene	482836	483510	.	+	.	ID=GCA000560365_00447_gene;locus_tag=GCA000560365_00447;gene=pgpB
contig_1	Pyrodigal	CDS	482836	483510	.	+	0	ID=GCA000560365_00447;Name=Phosphatidic acid phosphatase type 2/haloperoxidase domain-containing protein;locus_tag=GCA000560365_00447;product=Phosphatidic acid phosphatase type 2/haloperoxidase domain-containing protein;gene=pgpB;Parent=GCA000560365_00447_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0671,COG:I,RefSeq:WP_000565820.1,SO:0001217,UniParc:UPI00000D9C8B,UniRef:UniRef100_Q2G0V8,UniRef:UniRef50_Q2G0V8,UniRef:UniRef90_Q2G0V8
contig_1	Pyrodigal	gene	483547	484281	.	+	.	ID=GCA000560365_00448_gene;locus_tag=GCA000560365_00448;gene=yvaK
contig_1	Pyrodigal	CDS	483547	484281	.	+	0	ID=GCA000560365_00448;Name=Serine aminopeptidase S33 domain-containing protein;locus_tag=GCA000560365_00448;product=Serine aminopeptidase S33 domain-containing protein;gene=yvaK;Parent=GCA000560365_00448_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1647,COG:Q,RefSeq:WP_001220813.1,SO:0001217,UniParc:UPI000005451C,UniRef:UniRef100_Q2G0V7,UniRef:UniRef50_Q2G0V7,UniRef:UniRef90_Q2G0V7
contig_1	Pyrodigal	gene	484459	484572	.	+	.	ID=GCA000560365_00449_gene;locus_tag=GCA000560365_00449
contig_1	Pyrodigal	CDS	484459	484572	.	+	0	ID=GCA000560365_00449;Name=hypothetical protein;locus_tag=GCA000560365_00449;product=hypothetical protein;Parent=GCA000560365_00449_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000510433.1,SO:0001217,UniParc:UPI000005451B,UniRef:UniRef100_Q2G0V6,UniRef:UniRef50_Q2G0V6,UniRef:UniRef90_Q2G0V6
contig_1	Pyrodigal	gene	484737	486074	.	+	.	ID=GCA000560365_00450_gene;locus_tag=GCA000560365_00450;gene=yocR
contig_1	Pyrodigal	CDS	484737	486074	.	+	0	ID=GCA000560365_00450;Name=Transporter;locus_tag=GCA000560365_00450;product=Transporter;gene=yocR;Parent=GCA000560365_00450_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0733,COG:R,RefSeq:WP_000828726.1,SO:0001217,UniParc:UPI00004B5B19,UniRef:UniRef100_A0A0H3K718,UniRef:UniRef50_A0A654CN93,UniRef:UniRef90_Q2G0V5
contig_1	Pyrodigal	gene	486291	487205	.	+	.	ID=GCA000560365_00451_gene;locus_tag=GCA000560365_00451;gene=cysK
contig_1	Pyrodigal	CDS	486291	487205	.	+	0	ID=GCA000560365_00451;Name=Tryptophan synthase beta chain-like PALP domain-containing protein;locus_tag=GCA000560365_00451;product=Tryptophan synthase beta chain-like PALP domain-containing protein;gene=cysK;Parent=GCA000560365_00451_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0031,COG:E,RefSeq:WP_000634105.1,SO:0001217,UniParc:UPI00004B5B1A,UniRef:UniRef100_Q2G0V4,UniRef:UniRef50_Q2G0V4,UniRef:UniRef90_Q2G0V4
contig_1	Pyrodigal	gene	487189	488331	.	+	.	ID=GCA000560365_00452_gene;locus_tag=GCA000560365_00452;gene=metC
contig_1	Pyrodigal	CDS	487189	488331	.	+	0	ID=GCA000560365_00452;Name=bifunctional cystathionine gamma-lyase/homocysteine desulfhydrase;locus_tag=GCA000560365_00452;product=bifunctional cystathionine gamma-lyase/homocysteine desulfhydrase;Dbxref=GO:0019346,GO:0030170;gene=metC;Parent=GCA000560365_00452_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0626,COG:E,KEGG:K17217,RefSeq:WP_001036663.1,SO:0001217,UniParc:UPI0000054518,UniRef:UniRef100_Q2G0V3,UniRef:UniRef50_Q1M0P5,UniRef:UniRef90_A0A2Y2FJW5;ec_number=4.4.1.2
contig_1	Pyrodigal	gene	488625	489650	.	+	.	ID=GCA000560365_00453_gene;locus_tag=GCA000560365_00453;gene=metN1
contig_1	Pyrodigal	CDS	488625	489650	.	+	0	ID=GCA000560365_00453;Name=Methionine import ATP-binding protein MetN 1;locus_tag=GCA000560365_00453;product=Methionine import ATP-binding protein MetN 1;Dbxref=GO:0005524,GO:0005886,GO:0016887,GO:0033232;gene=metN1;Parent=GCA000560365_00453_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1135,COG:E,RefSeq:WP_000569286.1,SO:0001217,UniParc:UPI00004B5B1B,UniRef:UniRef100_Q2G0V2,UniRef:UniRef50_Q2G0V2,UniRef:UniRef90_Q2G0V2;ec_number=7.4.2.11
contig_1	Pyrodigal	gene	489654	490313	.	+	.	ID=GCA000560365_00454_gene;locus_tag=GCA000560365_00454;gene=metP
contig_1	Pyrodigal	CDS	489654	490313	.	+	0	ID=GCA000560365_00454;Name=Methionine ABC transporter%2C permease component;locus_tag=GCA000560365_00454;product=Methionine ABC transporter%2C permease component;gene=metP;Parent=GCA000560365_00454_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2011,COG:E,RefSeq:WP_000467994.1,SO:0001217,UniParc:UPI0000054516,UniRef:UniRef100_Q2G0V1,UniRef:UniRef50_S2XCZ2,UniRef:UniRef90_A0A7U7JSM8
contig_1	Pyrodigal	gene	490350	491192	.	+	.	ID=GCA000560365_00455_gene;locus_tag=GCA000560365_00455;gene=gmpC
contig_1	Pyrodigal	CDS	490350	491192	.	+	0	ID=GCA000560365_00455;Name=dipeptide ABC transporter glycylmethionine-binding lipoprotein;locus_tag=GCA000560365_00455;product=dipeptide ABC transporter glycylmethionine-binding lipoprotein;gene=gmpC;Parent=GCA000560365_00455_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000825530,COG:COG1464,COG:P,RefSeq:WP_000825521.1,SO:0001217,UniParc:UPI00003DAF82,UniRef:UniRef100_Q2G0V0,UniRef:UniRef50_A0A2K4FBN2,UniRef:UniRef90_A0A2S6D5W8
contig_1	Pyrodigal	gene	491524	492528	.	+	.	ID=GCA000560365_00456_gene;locus_tag=GCA000560365_00456;gene=aaa
contig_1	Pyrodigal	CDS	491524	492528	.	+	0	ID=GCA000560365_00456;Name=autolysin/adhesin Aaa;locus_tag=GCA000560365_00456;product=autolysin/adhesin Aaa;Dbxref=GO:0000917,GO:0005576,GO:0008745,GO:0008932,GO:0009986,GO:0031640,GO:0042742,GO:0071555;gene=aaa;Parent=GCA000560365_00456_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001170264,COG:COG3942,COG:M,RefSeq:WP_001170264.1,SO:0001217,UniParc:UPI0000052267,UniRef:UniRef100_Q2G0U9,UniRef:UniRef50_Q2G0U9,UniRef:UniRef90_Q2G0U9;ec_number=3.5.1.28
contig_1	Pyrodigal	gene	492713	492982	.	-	.	ID=GCA000560365_00457_gene;locus_tag=GCA000560365_00457
contig_1	Pyrodigal	CDS	492713	492982	.	-	0	ID=GCA000560365_00457;Name=Cytosolic protein;locus_tag=GCA000560365_00457;product=Cytosolic protein;Parent=GCA000560365_00457_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001129473.1,SO:0001217,UniParc:UPI0000054512,UniRef:UniRef100_Q2G0U8,UniRef:UniRef50_Q2G0U8,UniRef:UniRef90_Q2G0U8
contig_1	Pyrodigal	gene	493131	493526	.	+	.	ID=GCA000560365_00458_gene;locus_tag=GCA000560365_00458;gene=mutT
contig_1	Pyrodigal	CDS	493131	493526	.	+	0	ID=GCA000560365_00458;Name=NUDIX domain-containing protein;locus_tag=GCA000560365_00458;product=NUDIX domain-containing protein;gene=mutT;Parent=GCA000560365_00458_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0494,COG:V,RefSeq:WP_000588527.1,SO:0001217,UniParc:UPI00004B5B1C,UniRef:UniRef100_Q2G0U7,UniRef:UniRef50_A0A2K4FBI9,UniRef:UniRef90_A0AAE8PBQ1
contig_1	Pyrodigal	gene	493516	494001	.	+	.	ID=GCA000560365_00459_gene;locus_tag=GCA000560365_00459;gene=rimI
contig_1	Pyrodigal	CDS	493516	494001	.	+	0	ID=GCA000560365_00459;Name=Acetyltransferase;locus_tag=GCA000560365_00459;product=Acetyltransferase;gene=rimI;Parent=GCA000560365_00459_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0456,COG:J,RefSeq:WP_000183669.1,SO:0001217,UniParc:UPI00004B5B1D,UniRef:UniRef100_Q2G0U6,UniRef:UniRef50_A0A6B1RF14,UniRef:UniRef90_A0A6B1RF14
contig_1	Pyrodigal	gene	494170	494952	.	-	.	ID=GCA000560365_00460_gene;locus_tag=GCA000560365_00460
contig_1	Pyrodigal	CDS	494170	494952	.	-	0	ID=GCA000560365_00460;Name=YibE/F family protein;locus_tag=GCA000560365_00460;product=YibE/F family protein;Parent=GCA000560365_00460_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5438,COG:S,RefSeq:WP_000994678.1,SO:0001217,UniParc:UPI000005450F,UniRef:UniRef100_Q2G0U5,UniRef:UniRef50_Q2G0U5,UniRef:UniRef90_Q2G0U5
contig_1	Pyrodigal	gene	494949	496061	.	-	.	ID=GCA000560365_00461_gene;locus_tag=GCA000560365_00461
contig_1	Pyrodigal	CDS	494949	496061	.	-	0	ID=GCA000560365_00461;Name=YibE/F family protein;locus_tag=GCA000560365_00461;product=YibE/F family protein;Parent=GCA000560365_00461_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5438,COG:S,RefSeq:WP_000877414.1,SO:0001217,UniParc:UPI0000696BB5,UniRef:UniRef100_A0A1S6A7P3,UniRef:UniRef50_Q2G0U4,UniRef:UniRef90_Q2G0U4
contig_1	Pyrodigal	gene	496182	497066	.	-	.	ID=GCA000560365_00462_gene;locus_tag=GCA000560365_00462;gene=gltC
contig_1	Pyrodigal	CDS	496182	497066	.	-	0	ID=GCA000560365_00462;Name=glutamate biosynthesis transcriptional regulator GltC;locus_tag=GCA000560365_00462;product=glutamate biosynthesis transcriptional regulator GltC;Dbxref=GO:0003700,GO:1902065;gene=gltC;Parent=GCA000560365_00462_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0583,COG:K,RefSeq:WP_000403916.1,SO:0001217,UniParc:UPI000005450D,UniRef:UniRef100_Q2G0U3,UniRef:UniRef50_Q2G0U3,UniRef:UniRef90_Q2G0U3
contig_1	Pyrodigal	gene	497247	501746	.	+	.	ID=GCA000560365_00463_gene;locus_tag=GCA000560365_00463;gene=gltB
contig_1	Pyrodigal	CDS	497247	501746	.	+	0	ID=GCA000560365_00463;Name=glutamate synthase large subunit;locus_tag=GCA000560365_00463;product=glutamate synthase large subunit;Dbxref=GO:0003824,GO:0006537,GO:0008152,GO:0015930,GO:0016491;gene=gltB;Parent=GCA000560365_00463_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0070,COG:E,RefSeq:WP_000551362.1,SO:0001217,UniParc:UPI0000696BB6,UniRef:UniRef100_Q2G0U2,UniRef:UniRef50_A0A2X2UM59,UniRef:UniRef90_A0A2X2UM59;ec_number=1.4.1.13
contig_1	Pyrodigal	gene	501764	503227	.	+	.	ID=GCA000560365_00464_gene;locus_tag=GCA000560365_00464;gene=gltD
contig_1	Pyrodigal	CDS	501764	503227	.	+	0	ID=GCA000560365_00464;Name=Glutamate synthase subunit beta;locus_tag=GCA000560365_00464;product=Glutamate synthase subunit beta;gene=gltD;Parent=GCA000560365_00464_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0493,COG:ER,RefSeq:WP_000503581.1,SO:0001217,UniParc:UPI0000696BB7,UniRef:UniRef100_A0A5A8VD92,UniRef:UniRef50_B9DLG4,UniRef:UniRef90_A0A0E1X9F2
contig_1	tRNAscan-SE	gene	503496	503588	.	+	.	ID=GCA000560365_00465_gene;locus_tag=GCA000560365_00465;gene=trnS
contig_1	tRNAscan-SE	tRNA	503496	503588	.	+	.	ID=GCA000560365_00465;Name=tRNA-Ser(tga);locus_tag=GCA000560365_00465;product=tRNA-Ser(tga);gene=trnS;anti_codon=tga;amino_acid=Ser;Parent=GCA000560365_00465_gene;inference=profile:tRNAscan:2.0;Note=SO:0000269
contig_1	Pyrodigal	gene	504059	505486	.	+	.	ID=GCA000560365_00466_gene;locus_tag=GCA000560365_00466;gene=treB
contig_1	Pyrodigal	CDS	504059	505486	.	+	0	ID=GCA000560365_00466;Name=PTS trehalose transporter subunit IIBC;locus_tag=GCA000560365_00466;product=PTS trehalose transporter subunit IIBC;Dbxref=GO:0008982,GO:0009401,GO:0015574,GO:0015771,GO:0016020;gene=treB;Parent=GCA000560365_00466_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1264,COG:G,KEGG:K02819,RefSeq:WP_000279374.1,SO:0001217,UniParc:UPI00004B5B20,UniRef:UniRef100_Q2G0U0,UniRef:UniRef50_A0A7S8HGB6,UniRef:UniRef90_A0A2U0IK03;ec_number=2.7.1.201
contig_1	Pyrodigal	gene	505550	507190	.	+	.	ID=GCA000560365_00467_gene;locus_tag=GCA000560365_00467;gene=treC
contig_1	Pyrodigal	CDS	505550	507190	.	+	0	ID=GCA000560365_00467;Name=alpha%2Calpha-phosphotrehalase;locus_tag=GCA000560365_00467;product=alpha%2Calpha-phosphotrehalase;Dbxref=GO:0005737,GO:0005991,GO:0008788;gene=treC;Parent=GCA000560365_00467_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0366,COG:G,RefSeq:WP_000031515.1,SO:0001217,UniParc:UPI0000696BB8,UniRef:UniRef100_A0A0E8IZU7,UniRef:UniRef50_A0A1C7FDU5,UniRef:UniRef90_A0AAE2ZTT9;ec_number=3.2.1.93
contig_1	Pyrodigal	gene	507215	507943	.	+	.	ID=GCA000560365_00468_gene;locus_tag=GCA000560365_00468;gene=treR
contig_1	Pyrodigal	CDS	507215	507943	.	+	0	ID=GCA000560365_00468;Name=trehalose operon repressor;locus_tag=GCA000560365_00468;product=trehalose operon repressor;Dbxref=GO:0003677,GO:0003700,GO:0006355;gene=treR;Parent=GCA000560365_00468_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2188,COG:K,KEGG:K03486,RefSeq:WP_001118675.1,SO:0001217,UniParc:UPI00000D77D0,UniRef:UniRef100_Q2G0T8,UniRef:UniRef50_A0A291JNW9,UniRef:UniRef90_A0A380DK00
contig_1	Infernal	gene	508005	508274	.	+	.	ID=GCA000560365_00469_gene;locus_tag=GCA000560365_00469;gene=Bacteria_large_SRP
contig_1	Infernal	ncRNA	508005	508274	2.3e-31	+	.	ID=GCA000560365_00469;Name=Bacterial large signal recognition particle RNA;locus_tag=GCA000560365_00469;product=Bacterial large signal recognition particle RNA;Dbxref=RFAM:RF01854;Parent=GCA000560365_00469_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01854
contig_1	Infernal	gene	508123	508222	.	+	.	ID=GCA000560365_00470_gene;locus_tag=GCA000560365_00470;gene=Bacteria_small_SRP
contig_1	Infernal	ncRNA	508123	508222	9.6e-12	+	.	ID=GCA000560365_00470;Name=Bacterial small signal recognition particle RNA;locus_tag=GCA000560365_00470;product=Bacterial small signal recognition particle RNA;Dbxref=RFAM:RF00169;Parent=GCA000560365_00470_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00169
contig_1	Pyrodigal	gene	508582	509106	.	+	.	ID=GCA000560365_00471_gene;locus_tag=GCA000560365_00471;gene=yhbS
contig_1	Pyrodigal	CDS	508582	509106	.	+	0	ID=GCA000560365_00471;Name=N-acetyltransferase domain-containing protein;locus_tag=GCA000560365_00471;product=N-acetyltransferase domain-containing protein;gene=yhbS;Parent=GCA000560365_00471_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3153,COG:R,RefSeq:WP_001167828.1,SO:0001217,UniParc:UPI0000054503,UniRef:UniRef100_Q2G0T6,UniRef:UniRef50_Q2G0T6,UniRef:UniRef90_Q2G0T6
contig_1	Pyrodigal	gene	509175	510872	.	+	.	ID=GCA000560365_00472_gene;locus_tag=GCA000560365_00472;gene=dnaX
contig_1	Pyrodigal	CDS	509175	510872	.	+	0	ID=GCA000560365_00472;Name=DNA polymerase III subunit gamma/tau;locus_tag=GCA000560365_00472;product=DNA polymerase III subunit gamma/tau;Dbxref=GO:0003677,GO:0003887,GO:0005524,GO:0006260,GO:0009360;gene=dnaX;Parent=GCA000560365_00472_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2812,COG:L,KEGG:K02343,RefSeq:WP_001109047.1,SO:0001217,UniParc:UPI00004B5B23,UniRef:UniRef100_Q2G0T5,UniRef:UniRef50_A0A9X6AJV3,UniRef:UniRef90_A0A3M9FQF8;ec_number=2.7.7.7
contig_1	Pyrodigal	gene	510962	511279	.	+	.	ID=GCA000560365_00473_gene;locus_tag=GCA000560365_00473;gene=ybaB
contig_1	Pyrodigal	CDS	510962	511279	.	+	0	ID=GCA000560365_00473;Name=YbaB/EbfC family nucleoid-associated protein;locus_tag=GCA000560365_00473;product=YbaB/EbfC family nucleoid-associated protein;Dbxref=GO:0003677,GO:0005829,GO:0043590;gene=ybaB;Parent=GCA000560365_00473_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0718,COG:K,RefSeq:WP_001213992.1,SO:0001217,UniParc:UPI0000054501,UniRef:UniRef100_Q2G0T4,UniRef:UniRef50_Q2G0T4,UniRef:UniRef90_Q2G0T4
contig_1	Pyrodigal	gene	511286	511882	.	+	.	ID=GCA000560365_00474_gene;locus_tag=GCA000560365_00474;gene=recR
contig_1	Pyrodigal	CDS	511286	511882	.	+	0	ID=GCA000560365_00474;Name=recombination mediator RecR;locus_tag=GCA000560365_00474;product=recombination mediator RecR;Dbxref=GO:0003677,GO:0006281,GO:0006310,GO:0046872;gene=recR;Parent=GCA000560365_00474_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0353,COG:L,KEGG:K06187,RefSeq:WP_000559156.1,SO:0001217,UniParc:UPI0000054500,UniRef:UniRef100_Q2G0T3,UniRef:UniRef50_Q6GJJ3,UniRef:UniRef90_Q6GJJ3
contig_1	Bakta	gap	513011	516169	.	.	.	ID=KMHODOBJJH_2859;Name=gap (3159 bp);product=gap (3159 bp)
contig_1	Infernal	gene	516260	516374	.	+	.	ID=GCA000560365_00475_gene;locus_tag=GCA000560365_00475;gene=rrf
contig_1	Infernal	rRNA	516260	516374	1.1e-14	+	.	ID=GCA000560365_00475;Name=5S ribosomal RNA;locus_tag=GCA000560365_00475;gene=rrf;product=5S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00001;Parent=GCA000560365_00475_gene;Note=KEGG:K01985,SO:0000652;inference=profile:Rfam:RF00001
contig_1	Infernal	gene	516587	518138	.	+	.	ID=GCA000560365_00476_gene;locus_tag=GCA000560365_00476;gene=rrs
contig_1	Infernal	rRNA	516587	518138	1.5e-49	+	.	ID=GCA000560365_00476;Name=16S ribosomal RNA;locus_tag=GCA000560365_00476;gene=rrs;product=16S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00177;Parent=GCA000560365_00476_gene;Note=KEGG:K01977,SO:0001000;inference=profile:Rfam:RF00177
contig_1	Infernal	gene	518505	521427	.	+	.	ID=GCA000560365_00477_gene;locus_tag=GCA000560365_00477;gene=rrl
contig_1	Infernal	rRNA	518505	521427	1.4e-06	+	.	ID=GCA000560365_00477;Name=23S ribosomal RNA;locus_tag=GCA000560365_00477;gene=rrl;product=23S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF02541;Parent=GCA000560365_00477_gene;Note=KEGG:K01980,SO:0001001;inference=profile:Rfam:RF02541
contig_1	Infernal	gene	521500	521614	.	+	.	ID=GCA000560365_00478_gene;locus_tag=GCA000560365_00478;gene=rrf
contig_1	Infernal	rRNA	521500	521614	4.4e-14	+	.	ID=GCA000560365_00478;Name=5S ribosomal RNA;locus_tag=GCA000560365_00478;gene=rrf;product=5S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00001;Parent=GCA000560365_00478_gene;Note=KEGG:K01985,SO:0000652;inference=profile:Rfam:RF00001
contig_1	Pyrodigal	gene	522496	523833	.	+	.	ID=GCA000560365_00479_gene;locus_tag=GCA000560365_00479;gene=ldcC
contig_1	Pyrodigal	CDS	522496	523833	.	+	0	ID=GCA000560365_00479;Name=Aminotransferase class V-fold PLP-dependent enzyme;locus_tag=GCA000560365_00479;product=Aminotransferase class V-fold PLP-dependent enzyme;gene=ldcC;Parent=GCA000560365_00479_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1982,COG:E,RefSeq:WP_000812827.1,SO:0001217,UniParc:UPI0000696BBA,UniRef:UniRef100_A0A0E8JHP5,UniRef:UniRef50_A0A3A5LD70,UniRef:UniRef90_A0A3A5LD70
contig_1	Pyrodigal	gene	523835	524452	.	+	.	ID=GCA000560365_00480_gene;locus_tag=GCA000560365_00480;gene=tmk
contig_1	Pyrodigal	CDS	523835	524452	.	+	0	ID=GCA000560365_00480;Name=dTMP kinase;locus_tag=GCA000560365_00480;product=dTMP kinase;Dbxref=GO:0004798,GO:0005524,GO:0005829,GO:0006227,GO:0006233,GO:0006235;gene=tmk;Parent=GCA000560365_00480_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0125,COG:F,KEGG:K00943,RefSeq:WP_001272126.1,SO:0001217,UniParc:UPI000012E109,UniRef:UniRef100_Q2G230,UniRef:UniRef50_Q2G230,UniRef:UniRef90_Q2G230;ec_number=2.7.4.9
contig_1	Pyrodigal	gene	524480	524809	.	+	.	ID=GCA000560365_00481_gene;locus_tag=GCA000560365_00481;gene=darA
contig_1	Pyrodigal	CDS	524480	524809	.	+	0	ID=GCA000560365_00481;Name=Protein from nitrogen regulatory protein P-II (GLNB) family;locus_tag=GCA000560365_00481;product=Protein from nitrogen regulatory protein P-II (GLNB) family;gene=darA;Parent=GCA000560365_00481_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3870,COG:T,RefSeq:WP_000781979.1,SO:0001217,UniParc:UPI0000054655,UniRef:UniRef100_Q2G229,UniRef:UniRef50_P37538,UniRef:UniRef90_Q2G229
contig_1	Pyrodigal	gene	525023	525949	.	+	.	ID=GCA000560365_00482_gene;locus_tag=GCA000560365_00482;gene=holB
contig_1	Pyrodigal	CDS	525023	525949	.	+	0	ID=GCA000560365_00482;Name=DNA polymerase III subunit delta';locus_tag=GCA000560365_00482;product=DNA polymerase III subunit delta';gene=holB;Parent=GCA000560365_00482_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0470,COG:L,RefSeq:WP_000344337.1,SO:0001217,UniParc:UPI0000054653,UniRef:UniRef100_Q2G2X1,UniRef:UniRef50_B9DLG1,UniRef:UniRef90_A0A0H3JKW7
contig_1	Pyrodigal	gene	525950	526753	.	+	.	ID=GCA000560365_00483_gene;locus_tag=GCA000560365_00483;gene=yaaT
contig_1	Pyrodigal	CDS	525950	526753	.	+	0	ID=GCA000560365_00483;Name=PSP1 C-terminal domain-containing protein;locus_tag=GCA000560365_00483;product=PSP1 C-terminal domain-containing protein;gene=yaaT;Parent=GCA000560365_00483_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1774,COG:T,RefSeq:WP_001134194.1,SO:0001217,UniParc:UPI0000054652,UniRef:UniRef100_Q2G2W9,UniRef:UniRef50_Q2G2W9,UniRef:UniRef90_Q2G2W9
contig_1	Pyrodigal	gene	526770	527117	.	+	.	ID=GCA000560365_00484_gene;locus_tag=GCA000560365_00484;gene=yabA
contig_1	Pyrodigal	CDS	526770	527117	.	+	0	ID=GCA000560365_00484;Name=DNA replication initiation control protein YabA;locus_tag=GCA000560365_00484;product=DNA replication initiation control protein YabA;Dbxref=GO:0006260;gene=yabA;Parent=GCA000560365_00484_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4467,COG:L,RefSeq:WP_000375686.1,SO:0001217,UniParc:UPI00000D9CA0,UniRef:UniRef100_Q5HIJ1,UniRef:UniRef50_Q99WB7,UniRef:UniRef90_Q99WB7
contig_1	Pyrodigal	gene	527391	528116	.	+	.	ID=GCA000560365_00485_gene;locus_tag=GCA000560365_00485;gene=trmN6
contig_1	Pyrodigal	CDS	527391	528116	.	+	0	ID=GCA000560365_00485;Name=Methyltransferase;locus_tag=GCA000560365_00485;product=Methyltransferase;gene=trmN6;Parent=GCA000560365_00485_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4123,COG:J,RefSeq:WP_000910689.1,SO:0001217,UniParc:UPI0000054650,UniRef:UniRef100_Q2G2X0,UniRef:UniRef50_A0A380G9L7,UniRef:UniRef90_A0A0U1MFR2
contig_1	Pyrodigal	gene	528109	528357	.	+	.	ID=GCA000560365_00486_gene;locus_tag=GCA000560365_00486;gene=yhbQ
contig_1	Pyrodigal	CDS	528109	528357	.	+	0	ID=GCA000560365_00486;Name=UPF0213 protein SACOL0530;locus_tag=GCA000560365_00486;product=UPF0213 protein SACOL0530;gene=yhbQ;Parent=GCA000560365_00486_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2827,COG:L,RefSeq:WP_000377064.1,SO:0001217,UniParc:UPI000005464F,UniRef:UniRef100_Q2G2W7,UniRef:UniRef50_Q2G2W7,UniRef:UniRef90_Q2G2W7
contig_1	Pyrodigal	gene	528359	529198	.	+	.	ID=GCA000560365_00487_gene;locus_tag=GCA000560365_00487;gene=rsmI
contig_1	Pyrodigal	CDS	528359	529198	.	+	0	ID=GCA000560365_00487;Name=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;locus_tag=GCA000560365_00487;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;Dbxref=GO:0000451,GO:0008649,GO:0008757;gene=rsmI;Parent=GCA000560365_00487_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0313,COG:J,RefSeq:WP_000279926.1,SO:0001217,UniParc:UPI000005464E,UniRef:UniRef100_Q2G1S1,UniRef:UniRef50_A0A380GAP2,UniRef:UniRef90_A0A7Z7W1X5;ec_number=2.1.1.198
contig_1	Pyrodigal	gene	529483	531456	.	+	.	ID=GCA000560365_00488_gene;locus_tag=GCA000560365_00488;gene=metG
contig_1	Pyrodigal	CDS	529483	531456	.	+	0	ID=GCA000560365_00488;Name=methionine--tRNA ligase;locus_tag=GCA000560365_00488;product=methionine--tRNA ligase;Dbxref=GO:0000049,GO:0004825,GO:0005524,GO:0005737,GO:0006431;gene=metG;Parent=GCA000560365_00488_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0143,COG:J,RefSeq:WP_001051143.1,SO:0001217,UniParc:UPI0000696BBC,UniRef:UniRef100_A0A1S6DKH1,UniRef:UniRef50_P23920,UniRef:UniRef90_Q8NY00;ec_number=6.1.1.10
contig_1	Pyrodigal	gene	531487	532260	.	+	.	ID=GCA000560365_00489_gene;locus_tag=GCA000560365_00489;gene=tatD
contig_1	Pyrodigal	CDS	531487	532260	.	+	0	ID=GCA000560365_00489;Name=Metal-dependent DNase;locus_tag=GCA000560365_00489;product=Metal-dependent DNase;gene=tatD;Parent=GCA000560365_00489_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0084,COG:N,KEGG:K03424,RefSeq:WP_000904312.1,SO:0001217,UniParc:UPI0000047408,UniRef:UniRef100_Q2G1S2,UniRef:UniRef50_P37545,UniRef:UniRef90_A0A7U7JSZ7;ec_number=3.1.21.-
contig_1	Pyrodigal	gene	532427	532963	.	+	.	ID=GCA000560365_00490_gene;locus_tag=GCA000560365_00490;gene=rnmV
contig_1	Pyrodigal	CDS	532427	532963	.	+	0	ID=GCA000560365_00490;Name=ribonuclease M5;locus_tag=GCA000560365_00490;product=ribonuclease M5;Dbxref=GO:0005737,GO:0006364,GO:0019843,GO:0043822,GO:0046872;gene=rnmV;Parent=GCA000560365_00490_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1658,COG:J,KEGG:K05985,RefSeq:WP_000700083.1,SO:0001217,UniParc:UPI0000696BBD,UniRef:UniRef100_A0A5A8VC50,UniRef:UniRef50_Q2G0T1,UniRef:UniRef90_Q2G0T1;ec_number=3.1.26.8
contig_1	Pyrodigal	gene	532974	533867	.	+	.	ID=GCA000560365_00491_gene;locus_tag=GCA000560365_00491;gene=rsmA
contig_1	Pyrodigal	CDS	532974	533867	.	+	0	ID=GCA000560365_00491;Name=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;locus_tag=GCA000560365_00491;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;Dbxref=GO:0000179,GO:0003723,GO:0005829,GO:0006364,GO:0052908;gene=rsmA;Parent=GCA000560365_00491_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0030,COG:J,RefSeq:WP_000886500.1,SO:0001217,UniParc:UPI000012E0C1,UniRef:UniRef100_Q2G0T0,UniRef:UniRef50_Q2G0T0,UniRef:UniRef90_Q2G0T0;ec_number=2.1.1.182
contig_1	Pyrodigal	gene	533967	534230	.	+	.	ID=GCA000560365_00492_gene;locus_tag=GCA000560365_00492
contig_1	Pyrodigal	CDS	533967	534230	.	+	0	ID=GCA000560365_00492;Name=Veg protein;locus_tag=GCA000560365_00492;product=Veg protein;Parent=GCA000560365_00492_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4466,COG:S,RefSeq:WP_001126664.1,SO:0001217,UniParc:UPI0000054649,UniRef:UniRef100_Q2G0S9,UniRef:UniRef50_Q2G0S9,UniRef:UniRef90_Q2G0S9
contig_1	Pyrodigal	gene	534540	535388	.	+	.	ID=GCA000560365_00493_gene;locus_tag=GCA000560365_00493;gene=ispE
contig_1	Pyrodigal	CDS	534540	535388	.	+	0	ID=GCA000560365_00493;Name=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;locus_tag=GCA000560365_00493;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;Dbxref=GO:0005524,GO:0016114,GO:0050515;gene=ispE;Parent=GCA000560365_00493_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1947,COG:I,KEGG:K00919,RefSeq:WP_000638870.1,SO:0001217,UniParc:UPI0000054648,UniRef:UniRef100_Q2G0S8,UniRef:UniRef50_B9E8V7,UniRef:UniRef90_Q2G0S8;ec_number=2.7.1.148
contig_1	Pyrodigal	gene	535402	536226	.	+	.	ID=GCA000560365_00494_gene;locus_tag=GCA000560365_00494;gene=purR
contig_1	Pyrodigal	CDS	535402	536226	.	+	0	ID=GCA000560365_00494;Name=pur operon repressor;locus_tag=GCA000560365_00494;product=pur operon repressor;Dbxref=GO:0003677,GO:0006355,GO:0009116,GO:0045892,GO:0045982;gene=purR;Parent=GCA000560365_00494_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0503,COG:F,KEGG:K09685,RefSeq:WP_001269643.1,SO:0001217,UniParc:UPI0000054647,UniRef:UniRef100_Q2G0S7,UniRef:UniRef50_I0JH29,UniRef:UniRef90_Q5HRQ9
contig_1	Pyrodigal	gene	536243	536623	.	+	.	ID=GCA000560365_00495_gene;locus_tag=GCA000560365_00495;gene=ridA
contig_1	Pyrodigal	CDS	536243	536623	.	+	0	ID=GCA000560365_00495;Name=RidA family protein;locus_tag=GCA000560365_00495;product=RidA family protein;gene=ridA;Parent=GCA000560365_00495_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0251,COG:V,RefSeq:WP_000691766.1,SO:0001217,UniParc:UPI0000054646,UniRef:UniRef100_Q2G0S6,UniRef:UniRef50_Q2G0S6,UniRef:UniRef90_Q2G0S6
contig_1	Pyrodigal	gene	536695	536997	.	+	.	ID=GCA000560365_00496_gene;locus_tag=GCA000560365_00496;gene=spoVG
contig_1	Pyrodigal	CDS	536695	536997	.	+	0	ID=GCA000560365_00496;Name=septation regulator SpoVG;locus_tag=GCA000560365_00496;product=septation regulator SpoVG;Dbxref=GO:0000917,GO:0030435;gene=spoVG;Parent=GCA000560365_00496_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2088,COG:D,KEGG:K06412,RefSeq:WP_000868999.1,SO:0001217,UniParc:UPI0000054645,UniRef:UniRef100_Q2G0S5,UniRef:UniRef50_Q2G0S5,UniRef:UniRef90_Q2G0S5
contig_1	Pyrodigal	gene	537341	538693	.	+	.	ID=GCA000560365_00497_gene;locus_tag=GCA000560365_00497;gene=glmU
contig_1	Pyrodigal	CDS	537341	538693	.	+	0	ID=GCA000560365_00497;Name=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;locus_tag=GCA000560365_00497;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;Dbxref=GO:0000287,GO:0000902,GO:0003977,GO:0005737,GO:0006048,GO:0008360,GO:0009245,GO:0009252,GO:0016020,GO:0019134,GO:0071555;gene=glmU;Parent=GCA000560365_00497_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1207,COG:M,RefSeq:WP_001252529.1,SO:0001217,UniParc:UPI00000D9CA3,UniRef:UniRef100_Q2FJE2,UniRef:UniRef50_Q2YVU6,UniRef:UniRef90_Q2YVU6;ec_number=2.7.7.23
contig_1	Pyrodigal	gene	538840	539805	.	+	.	ID=GCA000560365_00498_gene;locus_tag=GCA000560365_00498;gene=prs
contig_1	Pyrodigal	CDS	538840	539805	.	+	0	ID=GCA000560365_00498;Name=ribose-phosphate diphosphokinase;locus_tag=GCA000560365_00498;product=ribose-phosphate diphosphokinase;Dbxref=GO:0000287,GO:0002189,GO:0004749,GO:0005524,GO:0005737,GO:0006015,GO:0006164,GO:0009156,GO:0016301;gene=prs;Parent=GCA000560365_00498_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0462,COG:F,KEGG:K00948,RefSeq:WP_000933774.1,SO:0001217,UniParc:UPI0000054642,UniRef:UniRef100_P65236,UniRef:UniRef50_Q97E93,UniRef:UniRef90_Q49V09;ec_number=2.7.6.1
contig_1	Pyrodigal	gene	539955	540608	.	+	.	ID=GCA000560365_00499_gene;locus_tag=GCA000560365_00499;gene=rplY
contig_1	Pyrodigal	CDS	539955	540608	.	+	0	ID=GCA000560365_00499;Name=50S ribosomal protein L25/general stress protein Ctc;locus_tag=GCA000560365_00499;product=50S ribosomal protein L25/general stress protein Ctc;Dbxref=GO:0003735,GO:0006412,GO:0008097,GO:0022625;gene=rplY;Parent=GCA000560365_00499_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1825,COG:J,KEGG:K02897,RefSeq:WP_000157650.1,SO:0001217,UniParc:UPI00000D768D,UniRef:UniRef100_Q2FJE0,UniRef:UniRef50_Q2FJE0,UniRef:UniRef90_Q2FJE0
contig_1	Pyrodigal	gene	540919	541491	.	+	.	ID=GCA000560365_00500_gene;locus_tag=GCA000560365_00500;gene=pth
contig_1	Pyrodigal	CDS	540919	541491	.	+	0	ID=GCA000560365_00500;Name=aminoacyl-tRNA hydrolase;locus_tag=GCA000560365_00500;product=aminoacyl-tRNA hydrolase;Dbxref=GO:0004045,GO:0005737,GO:0006412;gene=pth;Parent=GCA000560365_00500_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0193,COG:J,RefSeq:WP_000649791.1,SO:0001217,UniParc:UPI00000013BE,UniRef:UniRef100_Q2G0R9,UniRef:UniRef50_P37470,UniRef:UniRef90_Q2G0R9;ec_number=3.1.1.29
contig_1	Pyrodigal	gene	541491	544997	.	+	.	ID=GCA000560365_00501_gene;locus_tag=GCA000560365_00501;gene=mfd
contig_1	Pyrodigal	CDS	541491	544997	.	+	0	ID=GCA000560365_00501;Name=transcription-repair coupling factor;locus_tag=GCA000560365_00501;product=transcription-repair coupling factor;Dbxref=GO:0000716,GO:0003678,GO:0003684,GO:0005524,GO:0005737,GO:0006281,GO:0006355,GO:0016787;gene=mfd;Parent=GCA000560365_00501_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1197,COG:LK,KEGG:K03723,RefSeq:WP_000154228.1,SO:0001217,UniParc:UPI000005463F,UniRef:UniRef100_Q2G0R8,UniRef:UniRef50_Q2G0R8,UniRef:UniRef90_Q2G0R8;ec_number=3.6.4.-
contig_1	Pyrodigal	gene	544987	546513	.	+	.	ID=GCA000560365_00502_gene;locus_tag=GCA000560365_00502;gene=spoVB
contig_1	Pyrodigal	CDS	544987	546513	.	+	0	ID=GCA000560365_00502;Name=Polysaccharide biosynthesis protein C-terminal domain-containing protein;locus_tag=GCA000560365_00502;product=Polysaccharide biosynthesis protein C-terminal domain-containing protein;gene=spoVB;Parent=GCA000560365_00502_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5841,COG:D,RefSeq:WP_000680733.1,SO:0001217,UniParc:UPI00004B5B28,UniRef:UniRef100_Q2G0R7,UniRef:UniRef50_A0A380G459,UniRef:UniRef90_Q2G0R7
contig_1	Pyrodigal	gene	546513	547706	.	+	.	ID=GCA000560365_00503_gene;locus_tag=GCA000560365_00503;gene=yabN
contig_1	Pyrodigal	CDS	546513	547706	.	+	0	ID=GCA000560365_00503;Name=Nucleoside triphosphate pyrophosphohydrolase;locus_tag=GCA000560365_00503;product=Nucleoside triphosphate pyrophosphohydrolase;gene=yabN;Parent=GCA000560365_00503_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3956,COG:R,KEGG:K02499,RefSeq:WP_000951448.1,SO:0001217,UniParc:UPI0000696BBE,UniRef:UniRef100_A0A5A8VF99,UniRef:UniRef50_A0A240AB46,UniRef:UniRef90_A0A3A3A7S3
contig_1	Pyrodigal	gene	547703	547966	.	+	.	ID=GCA000560365_00504_gene;locus_tag=GCA000560365_00504;gene=hslR
contig_1	Pyrodigal	CDS	547703	547966	.	+	0	ID=GCA000560365_00504;Name=RNA-binding S4 domain-containing protein;locus_tag=GCA000560365_00504;product=RNA-binding S4 domain-containing protein;gene=hslR;Parent=GCA000560365_00504_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1188,COG:J,RefSeq:WP_001234988.1,SO:0001217,UniParc:UPI000005463C,UniRef:UniRef100_Q2G0R5,UniRef:UniRef50_P37557,UniRef:UniRef90_Q2G0R5
contig_1	Pyrodigal	gene	547984	548376	.	+	.	ID=GCA000560365_00505_gene;locus_tag=GCA000560365_00505;gene=ftsB
contig_1	Pyrodigal	CDS	547984	548376	.	+	0	ID=GCA000560365_00505;Name=Septum formation initiator family protein;locus_tag=GCA000560365_00505;product=Septum formation initiator family protein;gene=ftsB;Parent=GCA000560365_00505_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2919,COG:D,KEGG:K13052,RefSeq:WP_000792417.1,SO:0001217,UniParc:UPI000005463B,UniRef:UniRef100_Q2G0R4,UniRef:UniRef50_Q2G0R4,UniRef:UniRef90_Q2G0R4
contig_1	Pyrodigal	gene	548481	548882	.	+	.	ID=GCA000560365_00506_gene;locus_tag=GCA000560365_00506;gene=yabR
contig_1	Pyrodigal	CDS	548481	548882	.	+	0	ID=GCA000560365_00506;Name=S1 domain-containing RNA-binding protein;locus_tag=GCA000560365_00506;product=S1 domain-containing RNA-binding protein;Dbxref=GO:0003676;gene=yabR;Parent=GCA000560365_00506_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1098,COG:R,RefSeq:WP_000021445.1,SO:0001217,UniParc:UPI0000054639,UniRef:UniRef100_Q2G0R3,UniRef:UniRef50_P37560,UniRef:UniRef90_A0AAJ5CU27
contig_1	Pyrodigal	gene	549062	550357	.	+	.	ID=GCA000560365_00507_gene;locus_tag=GCA000560365_00507;gene=tilS
contig_1	Pyrodigal	CDS	549062	550357	.	+	0	ID=GCA000560365_00507;Name=tRNA(Ile)-lysidine synthase;locus_tag=GCA000560365_00507;product=tRNA(Ile)-lysidine synthase;Dbxref=GO:0005524,GO:0005737,GO:0006400,GO:0032267;gene=tilS;Parent=GCA000560365_00507_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0037,COG:J,KEGG:K04075,RefSeq:WP_001176715.1,SO:0001217,UniParc:UPI0000054638,UniRef:UniRef100_Q5HIG6,UniRef:UniRef50_Q5HRP5,UniRef:UniRef90_Q99W94;ec_number=6.3.4.19
contig_1	Pyrodigal	gene	550362	550901	.	+	.	ID=GCA000560365_00508_gene;locus_tag=GCA000560365_00508;gene=hpt
contig_1	Pyrodigal	CDS	550362	550901	.	+	0	ID=GCA000560365_00508;Name=hypoxanthine phosphoribosyltransferase;locus_tag=GCA000560365_00508;product=hypoxanthine phosphoribosyltransferase;Dbxref=GO:0000166,GO:0000287,GO:0004422,GO:0005829,GO:0006166,GO:0006178,GO:0032263,GO:0032264,GO:0046100,GO:0052657;gene=hpt;Parent=GCA000560365_00508_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0634,COG:F,RefSeq:WP_000551283.1,SO:0001217,UniParc:UPI00000D7886,UniRef:UniRef100_Q5HIG5,UniRef:UniRef50_Q839B2,UniRef:UniRef90_Q5HRP4;ec_number=2.4.2.8
contig_1	Pyrodigal	gene	551158	553251	.	+	.	ID=GCA000560365_00509_gene;locus_tag=GCA000560365_00509;gene=ftsH
contig_1	Pyrodigal	CDS	551158	553251	.	+	0	ID=GCA000560365_00509;Name=ATP-dependent zinc metalloprotease FtsH;locus_tag=GCA000560365_00509;product=ATP-dependent zinc metalloprotease FtsH;Dbxref=GO:0004222,GO:0006508,GO:0016020,GO:0016887,GO:0051301;gene=ftsH;Parent=GCA000560365_00509_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0465,COG:O,KEGG:K04083,RefSeq:WP_001167887.1,SO:0001217,UniParc:UPI00004B5B2A,UniRef:UniRef100_A0A0E7WS66,UniRef:UniRef50_P37476,UniRef:UniRef90_A0A0E7WS66
contig_1	Pyrodigal	gene	553480	554361	.	+	.	ID=GCA000560365_00510_gene;locus_tag=GCA000560365_00510;gene=hslO
contig_1	Pyrodigal	CDS	553480	554361	.	+	0	ID=GCA000560365_00510;Name=Hsp33 family molecular chaperone HslO;locus_tag=GCA000560365_00510;product=Hsp33 family molecular chaperone HslO;Dbxref=GO:0005737,GO:0006457,GO:0042026,GO:0044183,GO:0051082;gene=hslO;Parent=GCA000560365_00510_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K04083,RefSeq:WP_000148605.1,SO:0001217,UniParc:UPI0000054634,UniRef:UniRef100_Q2G0Q9,UniRef:UniRef50_P37565,UniRef:UniRef90_Q2G0Q9
contig_1	Pyrodigal	gene	554540	555472	.	+	.	ID=GCA000560365_00511_gene;locus_tag=GCA000560365_00511;gene=cysK
contig_1	Pyrodigal	CDS	554540	555472	.	+	0	ID=GCA000560365_00511;Name=cysteine synthase A;locus_tag=GCA000560365_00511;product=cysteine synthase A;Dbxref=GO:0004124,GO:0006535;gene=cysK;Parent=GCA000560365_00511_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0031,COG:E,RefSeq:WP_031808137.1,SO:0001217,UniParc:UPI0004481BBA,UniRef:UniRef100_UPI0004481BBA,UniRef:UniRef50_Q5HRP1,UniRef:UniRef90_Q5HRP1;ec_number=2.5.1.47
contig_1	Pyrodigal	gene	555688	556491	.	+	.	ID=GCA000560365_00512_gene;locus_tag=GCA000560365_00512;gene=folP
contig_1	Pyrodigal	CDS	555688	556491	.	+	0	ID=GCA000560365_00512;Name=dihydropteroate synthase;locus_tag=GCA000560365_00512;product=dihydropteroate synthase;Dbxref=GO:0004156,GO:0005829,GO:0009396,GO:0046654,GO:0046656,GO:0046872;gene=folP;Parent=GCA000560365_00512_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0294,COG:H,KEGG:K00796,RefSeq:WP_000167924.1,SO:0001217,UniParc:UPI00000D9CA7,UniRef:UniRef100_Q8NXZ2,UniRef:UniRef50_P64141,UniRef:UniRef90_P64141;ec_number=2.5.1.15
contig_1	Pyrodigal	gene	556469	556834	.	+	.	ID=GCA000560365_00513_gene;locus_tag=GCA000560365_00513;gene=folB
contig_1	Pyrodigal	CDS	556469	556834	.	+	0	ID=GCA000560365_00513;Name=dihydroneopterin aldolase;locus_tag=GCA000560365_00513;product=dihydroneopterin aldolase;Dbxref=GO:0004150,GO:0005737,GO:0006760,GO:0016853,GO:0046654,GO:0046656;gene=folB;Parent=GCA000560365_00513_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1539,COG:H,RefSeq:WP_001154302.1,SO:0001217,UniParc:UPI00000D7721,UniRef:UniRef100_Q5HIG0,UniRef:UniRef50_Q5HIG0,UniRef:UniRef90_Q5HIG0;ec_number=4.1.2.25
contig_1	Pyrodigal	gene	556831	557307	.	+	.	ID=GCA000560365_00514_gene;locus_tag=GCA000560365_00514;gene=folK
contig_1	Pyrodigal	CDS	556831	557307	.	+	0	ID=GCA000560365_00514;Name=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;locus_tag=GCA000560365_00514;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;Dbxref=GO:0003848,GO:0009396;gene=folK;Parent=GCA000560365_00514_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0801,COG:H,RefSeq:WP_000613716.1,SO:0001217,UniParc:UPI0000054630,UniRef:UniRef100_Q2G0Q5,UniRef:UniRef50_Q2G0Q5,UniRef:UniRef90_Q2G0Q5;ec_number=2.7.6.3
contig_1	Pyrodigal	gene	557846	559333	.	+	.	ID=GCA000560365_00515_gene;locus_tag=GCA000560365_00515;gene=lysS
contig_1	Pyrodigal	CDS	557846	559333	.	+	0	ID=GCA000560365_00515;Name=lysine--tRNA ligase;locus_tag=GCA000560365_00515;product=lysine--tRNA ligase;Dbxref=GO:0000049,GO:0000287,GO:0004824,GO:0005524,GO:0005737,GO:0005829,GO:0006430,GO:0016740;gene=lysS;Parent=GCA000560365_00515_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1190,COG:J,KEGG:K04567,RefSeq:WP_001288202.1,SO:0001217,UniParc:UPI00000CA95E,UniRef:UniRef100_Q2G0Q3,UniRef:UniRef50_P37477,UniRef:UniRef90_Q2G0Q3;ec_number=6.1.1.6
contig_1	Infernal	gene	559891	560005	.	+	.	ID=GCA000560365_00516_gene;locus_tag=GCA000560365_00516;gene=rrf
contig_1	Infernal	rRNA	559891	560005	6.4e-15	+	.	ID=GCA000560365_00516;Name=5S ribosomal RNA;locus_tag=GCA000560365_00516;gene=rrf;product=5S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00001;Parent=GCA000560365_00516_gene;Note=KEGG:K01985,SO:0000652;inference=profile:Rfam:RF00001
contig_1	tRNAscan-SE	gene	560018	560093	.	+	.	ID=GCA000560365_00517_gene;locus_tag=GCA000560365_00517;gene=trnV
contig_1	tRNAscan-SE	tRNA	560018	560093	.	+	.	ID=GCA000560365_00517;Name=tRNA-Val(tac);locus_tag=GCA000560365_00517;product=tRNA-Val(tac);gene=trnV;anti_codon=tac;amino_acid=Val;Parent=GCA000560365_00517_gene;inference=profile:tRNAscan:2.0;Note=SO:0000273
contig_1	tRNAscan-SE	gene	560110	560185	.	+	.	ID=GCA000560365_00518_gene;locus_tag=GCA000560365_00518;gene=trnT
contig_1	tRNAscan-SE	tRNA	560110	560185	.	+	.	ID=GCA000560365_00518;Name=tRNA-Thr(tgt);locus_tag=GCA000560365_00518;product=tRNA-Thr(tgt);gene=trnT;anti_codon=tgt;amino_acid=Thr;Parent=GCA000560365_00518_gene;inference=profile:tRNAscan:2.0;Note=SO:0000270
contig_1	tRNAscan-SE	gene	560192	560264	.	+	.	ID=GCA000560365_00519_gene;locus_tag=GCA000560365_00519;gene=trnK
contig_1	tRNAscan-SE	tRNA	560192	560264	.	+	.	ID=GCA000560365_00519;Name=tRNA-Lys(ttt);locus_tag=GCA000560365_00519;product=tRNA-Lys(ttt);gene=trnK;anti_codon=ttt;amino_acid=Lys;Parent=GCA000560365_00519_gene;inference=profile:tRNAscan:2.0;Note=SO:0000265
contig_1	tRNAscan-SE	gene	560298	560372	.	+	.	ID=GCA000560365_00520_gene;locus_tag=GCA000560365_00520;gene=trnG
contig_1	tRNAscan-SE	tRNA	560298	560372	.	+	.	ID=GCA000560365_00520;Name=tRNA-Gly(gcc);locus_tag=GCA000560365_00520;product=tRNA-Gly(gcc);gene=trnG;anti_codon=gcc;amino_acid=Gly;Parent=GCA000560365_00520_gene;inference=profile:tRNAscan:2.0;Note=SO:0000260
contig_1	tRNAscan-SE	gene	560380	560468	.	+	.	ID=GCA000560365_00521_gene;locus_tag=GCA000560365_00521;gene=trnL
contig_1	tRNAscan-SE	tRNA	560380	560468	.	+	.	ID=GCA000560365_00521;Name=tRNA-Leu(taa);locus_tag=GCA000560365_00521;product=tRNA-Leu(taa);gene=trnL;anti_codon=taa;amino_acid=Leu;Parent=GCA000560365_00521_gene;inference=profile:tRNAscan:2.0;Note=SO:0000264
contig_1	tRNAscan-SE	gene	560474	560550	.	+	.	ID=GCA000560365_00522_gene;locus_tag=GCA000560365_00522;gene=trnR
contig_1	tRNAscan-SE	tRNA	560474	560550	.	+	.	ID=GCA000560365_00522;Name=tRNA-Arg(acg);locus_tag=GCA000560365_00522;product=tRNA-Arg(acg);gene=trnR;anti_codon=acg;amino_acid=Arg;Parent=GCA000560365_00522_gene;inference=profile:tRNAscan:2.0;Note=SO:0001036
contig_1	tRNAscan-SE	gene	560571	560644	.	+	.	ID=GCA000560365_00523_gene;locus_tag=GCA000560365_00523;gene=trnP
contig_1	tRNAscan-SE	tRNA	560571	560644	.	+	.	ID=GCA000560365_00523;Name=tRNA-Pro(tgg);locus_tag=GCA000560365_00523;product=tRNA-Pro(tgg);gene=trnP;anti_codon=tgg;amino_acid=Pro;Parent=GCA000560365_00523_gene;inference=profile:tRNAscan:2.0;Note=SO:0000268
contig_1	tRNAscan-SE	gene	560668	560743	.	+	.	ID=GCA000560365_00524_gene;locus_tag=GCA000560365_00524;gene=trnA
contig_1	tRNAscan-SE	tRNA	560668	560743	.	+	.	ID=GCA000560365_00524;Name=tRNA-Ala(tgc);locus_tag=GCA000560365_00524;product=tRNA-Ala(tgc);gene=trnA;anti_codon=tgc;amino_acid=Ala;Parent=GCA000560365_00524_gene;inference=profile:tRNAscan:2.0;Note=SO:0000254
contig_1	Infernal	gene	560866	562417	.	+	.	ID=GCA000560365_00525_gene;locus_tag=GCA000560365_00525;gene=rrs
contig_1	Infernal	rRNA	560866	562417	1.3e-49	+	.	ID=GCA000560365_00525;Name=16S ribosomal RNA;locus_tag=GCA000560365_00525;gene=rrs;product=16S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00177;Parent=GCA000560365_00525_gene;Note=KEGG:K01977,SO:0001000;inference=profile:Rfam:RF00177
contig_1	tRNAscan-SE	gene	562512	562588	.	+	.	ID=GCA000560365_00526_gene;locus_tag=GCA000560365_00526;gene=trnI
contig_1	tRNAscan-SE	tRNA	562512	562588	.	+	.	ID=GCA000560365_00526;Name=tRNA-Ile(gat);locus_tag=GCA000560365_00526;product=tRNA-Ile(gat);gene=trnI;anti_codon=gat;amino_acid=Ile;Parent=GCA000560365_00526_gene;inference=profile:tRNAscan:2.0;Note=SO:0000263
contig_1	Infernal	gene	562756	565678	.	+	.	ID=GCA000560365_00527_gene;locus_tag=GCA000560365_00527;gene=rrl
contig_1	Infernal	rRNA	562756	565678	1.4e-06	+	.	ID=GCA000560365_00527;Name=23S ribosomal RNA;locus_tag=GCA000560365_00527;gene=rrl;product=23S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF02541;Parent=GCA000560365_00527_gene;Note=KEGG:K01980,SO:0001001;inference=profile:Rfam:RF02541
contig_1	Infernal	gene	565751	565865	.	+	.	ID=GCA000560365_00528_gene;locus_tag=GCA000560365_00528;gene=rrf
contig_1	Infernal	rRNA	565751	565865	1.1e-14	+	.	ID=GCA000560365_00528;Name=5S ribosomal RNA;locus_tag=GCA000560365_00528;gene=rrf;product=5S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00001;Parent=GCA000560365_00528_gene;Note=KEGG:K01985,SO:0000652;inference=profile:Rfam:RF00001
contig_1	Pyrodigal	gene	566390	567772	.	-	.	ID=GCA000560365_00529_gene;locus_tag=GCA000560365_00529;gene=aRO8
contig_1	Pyrodigal	CDS	566390	567772	.	-	0	ID=GCA000560365_00529;Name=HTH gntR-type domain-containing protein;locus_tag=GCA000560365_00529;product=HTH gntR-type domain-containing protein;gene=aRO8;Parent=GCA000560365_00529_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1167,COG:KE,KEGG:K00375,RefSeq:WP_000799248.1,SO:0001217,UniParc:UPI00000D783D,UniRef:UniRef100_Q2G0Q2,UniRef:UniRef50_Q2G0Q2,UniRef:UniRef90_Q2G0Q2
contig_1	Pyrodigal	gene	567876	568763	.	+	.	ID=GCA000560365_00530_gene;locus_tag=GCA000560365_00530;gene=pdxS
contig_1	Pyrodigal	CDS	567876	568763	.	+	0	ID=GCA000560365_00530;Name=pyridoxal 5'-phosphate synthase subunit PdxS;locus_tag=GCA000560365_00530;product=pyridoxal 5'-phosphate synthase subunit PdxS;Dbxref=GO:0003824,GO:0006520,GO:0008615,GO:0036381,GO:0042823;gene=pdxS;Parent=GCA000560365_00530_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_003247145,COG:COG0214,COG:H,KEGG:K06215,RefSeq:WP_000034728.1,SO:0001217,UniParc:UPI0000054856,UniRef:UniRef100_Q2G0Q1,UniRef:UniRef50_P37527,UniRef:UniRef90_Q2G0Q1;ec_number=4.3.3.6
contig_1	Pyrodigal	gene	568767	569327	.	+	.	ID=GCA000560365_00531_gene;locus_tag=GCA000560365_00531;gene=pdxT
contig_1	Pyrodigal	CDS	568767	569327	.	+	0	ID=GCA000560365_00531;Name=pyridoxal 5'-phosphate synthase glutaminase subunit PdxT;locus_tag=GCA000560365_00531;product=pyridoxal 5'-phosphate synthase glutaminase subunit PdxT;Dbxref=GO:0004359,GO:0005829,GO:0006543,GO:0008614,GO:0016884,GO:0036381,GO:0042823,GO:1903600;gene=pdxT;Parent=GCA000560365_00531_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0311,COG:H,KEGG:K08681,RefSeq:WP_000690439.1,SO:0001217,UniParc:UPI0000054855,UniRef:UniRef100_Q2G0Q0,UniRef:UniRef50_Q2G0Q0,UniRef:UniRef90_Q2G0Q0;ec_number=4.3.3.6
contig_1	Pyrodigal	gene	569535	570749	.	-	.	ID=GCA000560365_00532_gene;locus_tag=GCA000560365_00532;gene=nupC
contig_1	Pyrodigal	CDS	569535	570749	.	-	0	ID=GCA000560365_00532;Name=NupC/NupG family nucleoside CNT transporter;locus_tag=GCA000560365_00532;product=NupC/NupG family nucleoside CNT transporter;gene=nupC;Parent=GCA000560365_00532_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1972,COG:F,KEGG:K11535,RefSeq:WP_000547794.1,SO:0001217,UniParc:UPI0000054854,UniRef:UniRef100_Q2G0P9,UniRef:UniRef50_Q2G0P9,UniRef:UniRef90_Q2G0P9
contig_1	Pyrodigal	gene	570898	571368	.	+	.	ID=GCA000560365_00533_gene;locus_tag=GCA000560365_00533;gene=ctsR
contig_1	Pyrodigal	CDS	570898	571368	.	+	0	ID=GCA000560365_00533;Name=Transcriptional regulator CtsR;locus_tag=GCA000560365_00533;product=Transcriptional regulator CtsR;Dbxref=GO:0003677,GO:0006355;gene=ctsR;Parent=GCA000560365_00533_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4463,COG:K,SO:0001217,UniParc:UPI0001D1697E,UniRef:UniRef100_Q2G0P8,UniRef:UniRef50_Q2G0P8,UniRef:UniRef90_Q2G0P8
contig_1	Pyrodigal	gene	571387	571953	.	+	.	ID=GCA000560365_00534_gene;locus_tag=GCA000560365_00534;gene=mcsA
contig_1	Pyrodigal	CDS	571387	571953	.	+	0	ID=GCA000560365_00534;Name=Protein-arginine kinase activator protein;locus_tag=GCA000560365_00534;product=Protein-arginine kinase activator protein;Dbxref=GO:0003677,GO:0005507,GO:0008270,GO:0046870,GO:0050897,GO:1990169,GO:1990170;gene=mcsA;Parent=GCA000560365_00534_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3880,COG:O,RefSeq:WP_000882069.1,SO:0001217,UniParc:UPI00000D7700,UniRef:UniRef100_Q2G0P7,UniRef:UniRef50_Q2G0P7,UniRef:UniRef90_Q2G0P7
contig_1	Pyrodigal	gene	571940	572950	.	+	.	ID=GCA000560365_00535_gene;locus_tag=GCA000560365_00535;gene=mcsB
contig_1	Pyrodigal	CDS	571940	572950	.	+	0	ID=GCA000560365_00535;Name=protein arginine kinase;locus_tag=GCA000560365_00535;product=protein arginine kinase;Dbxref=GO:0004111,GO:0004672,GO:0005524,GO:0005615,GO:0046314;gene=mcsB;Parent=GCA000560365_00535_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3869,COG:O,SO:0001217,UniParc:UPI0001574414,UniRef:UniRef100_Q2G0P6,UniRef:UniRef50_Q2G0P6,UniRef:UniRef90_Q2G0P6;ec_number=2.7.14.1
contig_1	Pyrodigal	gene	572964	575420	.	+	.	ID=GCA000560365_00536_gene;locus_tag=GCA000560365_00536;gene=clpC
contig_1	Pyrodigal	CDS	572964	575420	.	+	0	ID=GCA000560365_00536;Name=ATP-dependent Clp protease ATP-binding subunit ClpC;locus_tag=GCA000560365_00536;product=ATP-dependent Clp protease ATP-binding subunit ClpC;Dbxref=GO:0005524,GO:0005737,GO:0016887,GO:0034605;gene=clpC;Parent=GCA000560365_00536_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0542,COG:O,RefSeq:WP_000897132.1,SO:0001217,UniParc:UPI000005484F,UniRef:UniRef100_Q2G0P5,UniRef:UniRef50_Q2G0P5,UniRef:UniRef90_Q2G0P5
contig_1	Pyrodigal	gene	575905	577269	.	+	.	ID=GCA000560365_00537_gene;locus_tag=GCA000560365_00537;gene=radA
contig_1	Pyrodigal	CDS	575905	577269	.	+	0	ID=GCA000560365_00537;Name=DNA repair protein RadA;locus_tag=GCA000560365_00537;product=DNA repair protein RadA;Dbxref=GO:0003684,GO:0005524,GO:0006281;gene=radA;Parent=GCA000560365_00537_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1066,COG:L,RefSeq:WP_001085220.1,SO:0001217,UniParc:UPI00004B5B2C,UniRef:UniRef100_A0A0D3Q4U0,UniRef:UniRef50_A5GDK5,UniRef:UniRef90_A0A380G4B0
contig_1	Pyrodigal	gene	577294	578367	.	+	.	ID=GCA000560365_00538_gene;locus_tag=GCA000560365_00538
contig_1	Pyrodigal	CDS	577294	578367	.	+	0	ID=GCA000560365_00538;Name=TRAM domain-containing protein;locus_tag=GCA000560365_00538;product=TRAM domain-containing protein;Parent=GCA000560365_00538_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4956,COG:R,RefSeq:WP_001028376.1,SO:0001217,UniParc:UPI00000D7788,UniRef:UniRef100_Q2G242,UniRef:UniRef50_A0A9X6AJN5,UniRef:UniRef90_Q2G242
contig_1	Pyrodigal	gene	578924	580378	.	+	.	ID=GCA000560365_00539_gene;locus_tag=GCA000560365_00539;gene=gltX
contig_1	Pyrodigal	CDS	578924	580378	.	+	0	ID=GCA000560365_00539;Name=glutamate--tRNA ligase;locus_tag=GCA000560365_00539;product=glutamate--tRNA ligase;Dbxref=GO:0000049,GO:0000166,GO:0004818,GO:0005524,GO:0005829,GO:0006424,GO:0008270;gene=gltX;Parent=GCA000560365_00539_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0008,COG:J,RefSeq:WP_001283792.1,SO:0001217,UniParc:UPI000002E8EE,UniRef:UniRef100_Q2G241,UniRef:UniRef50_Q97NG1,UniRef:UniRef90_Q2G241;ec_number=6.1.1.17
contig_1	Pyrodigal	gene	580768	581448	.	+	.	ID=GCA000560365_00540_gene;locus_tag=GCA000560365_00540;gene=cysE
contig_1	Pyrodigal	CDS	580768	581448	.	+	0	ID=GCA000560365_00540;Name=serine O-acetyltransferase;locus_tag=GCA000560365_00540;product=serine O-acetyltransferase;Dbxref=GO:0005737,GO:0006535,GO:0009001;gene=cysE;Parent=GCA000560365_00540_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1045,COG:E,RefSeq:WP_001547606.1,SO:0001217,UniParc:UPI000175C520,UniRef:UniRef100_Q6GJE0,UniRef:UniRef50_A8F961,UniRef:UniRef90_Q5HRM4;ec_number=2.3.1.30
contig_1	Pyrodigal	gene	581432	582832	.	+	.	ID=GCA000560365_00541_gene;locus_tag=GCA000560365_00541;gene=cysS
contig_1	Pyrodigal	CDS	581432	582832	.	+	0	ID=GCA000560365_00541;Name=cysteine--tRNA ligase;locus_tag=GCA000560365_00541;product=cysteine--tRNA ligase;Dbxref=GO:0004817,GO:0005524,GO:0005737,GO:0005829,GO:0006423,GO:0008270;gene=cysS;Parent=GCA000560365_00541_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0215,COG:J,KEGG:K01883,RefSeq:WP_000631963.1,SO:0001217,UniParc:UPI00004B5B2E,UniRef:UniRef100_Q2G2M6,UniRef:UniRef50_Q06752,UniRef:UniRef90_Q2G2M6;ec_number=6.1.1.16
contig_1	Pyrodigal	gene	582825	583229	.	+	.	ID=GCA000560365_00542_gene;locus_tag=GCA000560365_00542;gene=mrnC
contig_1	Pyrodigal	CDS	582825	583229	.	+	0	ID=GCA000560365_00542;Name=Mini-ribonuclease 3;locus_tag=GCA000560365_00542;product=Mini-ribonuclease 3;Dbxref=GO:0004525,GO:0005737,GO:0006364,GO:0019843;gene=mrnC;Parent=GCA000560365_00542_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1939,COG:J,RefSeq:WP_000370182.1,SO:0001217,UniParc:UPI00000D770F,UniRef:UniRef100_Q2G2M4,UniRef:UniRef50_Q2G2M4,UniRef:UniRef90_Q2G2M4;ec_number=3.1.26.-
contig_1	Pyrodigal	gene	583237	583983	.	+	.	ID=GCA000560365_00543_gene;locus_tag=GCA000560365_00543;gene=rlmB
contig_1	Pyrodigal	CDS	583237	583983	.	+	0	ID=GCA000560365_00543;Name=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;locus_tag=GCA000560365_00543;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;Dbxref=GO:0003723,GO:0005829,GO:0006396,GO:0008173,GO:0032259;gene=rlmB;Parent=GCA000560365_00543_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0566,COG:J,RefSeq:WP_000390328.1,SO:0001217,UniParc:UPI00000BBCB5,UniRef:UniRef100_Q5HIE3,UniRef:UniRef50_Q49V41,UniRef:UniRef90_Q99W72;ec_number=2.1.1.-
contig_1	Pyrodigal	gene	583983	584507	.	+	.	ID=GCA000560365_00544_gene;locus_tag=GCA000560365_00544;gene=rae1
contig_1	Pyrodigal	CDS	583983	584507	.	+	0	ID=GCA000560365_00544;Name=NYN domain-containing protein;locus_tag=GCA000560365_00544;product=NYN domain-containing protein;gene=rae1;Parent=GCA000560365_00544_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3688,COG:J,KEGG:K06962,RefSeq:WP_000664738.1,SO:0001217,UniParc:UPI0000054846,UniRef:UniRef100_Q2G2M5,UniRef:UniRef50_Q49V42,UniRef:UniRef90_Q2G2M5
contig_1	Pyrodigal	gene	584588	585157	.	+	.	ID=GCA000560365_00545_gene;locus_tag=GCA000560365_00545;gene=rpoE
contig_1	Pyrodigal	CDS	584588	585157	.	+	0	ID=GCA000560365_00545;Name=RNA polymerase sigma factor SigS;locus_tag=GCA000560365_00545;product=RNA polymerase sigma factor SigS;gene=rpoE;Parent=GCA000560365_00545_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1595,COG:K,RefSeq:WP_000872873.1,SO:0001217,UniParc:UPI00004B5B2F,UniRef:UniRef100_Q2G0P4,UniRef:UniRef50_Q2G0P4,UniRef:UniRef90_Q2G0P4
contig_1	Pyrodigal	gene	585471	585653	.	+	.	ID=GCA000560365_00546_gene;locus_tag=GCA000560365_00546;gene=secE
contig_1	Pyrodigal	CDS	585471	585653	.	+	0	ID=GCA000560365_00546;Name=preprotein translocase subunit SecE;locus_tag=GCA000560365_00546;product=preprotein translocase subunit SecE;Dbxref=GO:0005886,GO:0006605,GO:0008320,GO:0009306,GO:0015450,GO:0043952,GO:0065002;gene=secE;Parent=GCA000560365_00546_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0690,COG:U,RefSeq:WP_001074474.1,SO:0001217,UniParc:UPI00000B7A5E,UniRef:UniRef100_Q5HIE0,UniRef:UniRef50_P0A0I4,UniRef:UniRef90_P0A0I4
contig_1	Pyrodigal	gene	585666	586214	.	+	.	ID=GCA000560365_00547_gene;locus_tag=GCA000560365_00547;gene=nusG
contig_1	Pyrodigal	CDS	585666	586214	.	+	0	ID=GCA000560365_00547;Name=transcription termination/antitermination protein NusG;locus_tag=GCA000560365_00547;product=transcription termination/antitermination protein NusG;Dbxref=GO:0005829,GO:0006353,GO:0031564,GO:0032784,GO:0140673;gene=nusG;Parent=GCA000560365_00547_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0250,COG:K,RefSeq:WP_001288302.1,SO:0001217,UniParc:UPI0000054843,UniRef:UniRef100_Q2G0P2,UniRef:UniRef50_Q2G0P2,UniRef:UniRef90_Q2G0P2
contig_1	Pyrodigal	gene	586395	586817	.	+	.	ID=GCA000560365_00548_gene;locus_tag=GCA000560365_00548;gene=rplK
contig_1	Pyrodigal	CDS	586395	586817	.	+	0	ID=GCA000560365_00548;Name=50S ribosomal protein L11;locus_tag=GCA000560365_00548;product=50S ribosomal protein L11;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0022625,GO:0070180;gene=rplK;Parent=GCA000560365_00548_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0080,COG:J,KEGG:K02867,RefSeq:WP_031808138.1,SO:0001217,UniParc:UPI0004521376,UniRef:UniRef100_UPI0004521376,UniRef:UniRef50_P0A0F4,UniRef:UniRef90_P0A0F4
contig_1	Pyrodigal	gene	587025	587717	.	+	.	ID=GCA000560365_00549_gene;locus_tag=GCA000560365_00549;gene=rplA
contig_1	Pyrodigal	CDS	587025	587717	.	+	0	ID=GCA000560365_00549;Name=50S ribosomal protein L1;locus_tag=GCA000560365_00549;product=50S ribosomal protein L1;Dbxref=GO:0000049,GO:0003723,GO:0003735,GO:0006412,GO:0006417,GO:0015934,GO:0019843;gene=rplA;Parent=GCA000560365_00549_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0081,COG:J,KEGG:K02863,RefSeq:WP_001074619.1,SO:0001217,UniParc:UPI0000054841,UniRef:UniRef100_Q2G0P0,UniRef:UniRef50_Q5M2K0,UniRef:UniRef90_Q2G0P0
contig_1	Infernal	regulatory_region	587805	587951	8.3e-11	+	.	ID=KMHODOBJJH_187;Name=Ribosomal protein L10 leader;product=Ribosomal protein L10 leader;Dbxref=RFAM:RF00557;inference=profile:Rfam:RF00557;Note=SO:0000140;regulatory_class=attenuator
contig_1	Pyrodigal	gene	587989	588489	.	+	.	ID=GCA000560365_00550_gene;locus_tag=GCA000560365_00550;gene=rplJ
contig_1	Pyrodigal	CDS	587989	588489	.	+	0	ID=GCA000560365_00550;Name=50S ribosomal protein L10;locus_tag=GCA000560365_00550;product=50S ribosomal protein L10;Dbxref=GO:0003735,GO:0006412,GO:0015934,GO:0070180;gene=rplJ;Parent=GCA000560365_00550_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0244,COG:J,KEGG:K02864,RefSeq:WP_001273085.1,SO:0001217,UniParc:UPI0000054840,UniRef:UniRef100_Q2G0N9,UniRef:UniRef50_P66042,UniRef:UniRef90_Q2G0N9
contig_1	Pyrodigal	gene	588532	588900	.	+	.	ID=GCA000560365_00551_gene;locus_tag=GCA000560365_00551;gene=rplL
contig_1	Pyrodigal	CDS	588532	588900	.	+	0	ID=GCA000560365_00551;Name=50S ribosomal protein L7/L12;locus_tag=GCA000560365_00551;product=50S ribosomal protein L7/L12;Dbxref=GO:0003729,GO:0003735,GO:0005840,GO:0006412,GO:0022625;gene=rplL;Parent=GCA000560365_00551_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0222,COG:J,RefSeq:WP_001273586.1,SO:0001217,UniParc:UPI0000052289,UniRef:UniRef100_P48860,UniRef:UniRef50_P48860,UniRef:UniRef90_P48860
contig_1	Pyrodigal	gene	589075	589683	.	+	.	ID=GCA000560365_00552_gene;locus_tag=GCA000560365_00552;gene=rsmC
contig_1	Pyrodigal	CDS	589075	589683	.	+	0	ID=GCA000560365_00552;Name=Methyltransferase small domain-containing protein;locus_tag=GCA000560365_00552;product=Methyltransferase small domain-containing protein;gene=rsmC;Parent=GCA000560365_00552_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2813,COG:J,RefSeq:WP_000020304.1,SO:0001217,UniParc:UPI000005483D,UniRef:UniRef100_Q2G0N7,UniRef:UniRef50_A0A556PLC6,UniRef:UniRef90_Q2G0N7
contig_1	Pyrodigal	gene	589898	593449	.	+	.	ID=GCA000560365_00553_gene;locus_tag=GCA000560365_00553;gene=rpoB
contig_1	Pyrodigal	CDS	589898	593449	.	+	0	ID=GCA000560365_00553;Name=DNA-directed RNA polymerase subunit beta;locus_tag=GCA000560365_00553;product=DNA-directed RNA polymerase subunit beta;Dbxref=GO:0000428,GO:0001054,GO:0001055,GO:0001056,GO:0001057,GO:0001058,GO:0001066,GO:0003677,GO:0003899,GO:0006351,GO:0032549;gene=rpoB;Parent=GCA000560365_00553_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0085,COG:K,KEGG:K03043,RefSeq:WP_000918667.1,SO:0001217,UniParc:UPI00000D771C,UniRef:UniRef100_P47768,UniRef:UniRef50_P47768,UniRef:UniRef90_P47768;ec_number=2.7.7.6
contig_1	Pyrodigal	gene	593586	597209	.	+	.	ID=GCA000560365_00554_gene;locus_tag=GCA000560365_00554;gene=rpoC
contig_1	Pyrodigal	CDS	593586	597209	.	+	0	ID=GCA000560365_00554;Name=DNA-directed RNA polymerase subunit beta';locus_tag=GCA000560365_00554;product=DNA-directed RNA polymerase subunit beta';Dbxref=GO:0000287,GO:0000428,GO:0001054,GO:0001055,GO:0001056,GO:0001057,GO:0001058,GO:0001066,GO:0003677,GO:0003899,GO:0006351,GO:0008270;gene=rpoC;Parent=GCA000560365_00554_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0086,COG:K,KEGG:K03046,SO:0001217,UniParc:UPI00015D7B2C,UniRef:UniRef100_Q2FJ97,UniRef:UniRef50_P37871,UniRef:UniRef90_Q2G0N5;ec_number=2.7.7.6
contig_1	Pyrodigal	gene	597346	597600	.	+	.	ID=GCA000560365_00555_gene;locus_tag=GCA000560365_00555;gene=rpl7Ae
contig_1	Pyrodigal	CDS	597346	597600	.	+	0	ID=GCA000560365_00555;Name=RNA-binding protein MW0499;locus_tag=GCA000560365_00555;product=RNA-binding protein MW0499;Dbxref=GO:0003723;gene=rpl7Ae;Parent=GCA000560365_00555_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1358,COG:J,KEGG:K07590,RefSeq:WP_000031892.1,SO:0001217,UniParc:UPI00001353D9,UniRef:UniRef100_P0A0G6,UniRef:UniRef50_P0A0G6,UniRef:UniRef90_P0A0G6
contig_1	Pyrodigal	gene	597698	598111	.	+	.	ID=GCA000560365_00556_gene;locus_tag=GCA000560365_00556;gene=rpsL
contig_1	Pyrodigal	CDS	597698	598111	.	+	0	ID=GCA000560365_00556;Name=30S ribosomal protein S12;locus_tag=GCA000560365_00556;product=30S ribosomal protein S12;Dbxref=GO:0000049,GO:0003735,GO:0006412,GO:0015935,GO:0019843;gene=rpsL;Parent=GCA000560365_00556_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0048,COG:J,KEGG:K02950,RefSeq:WP_001142337.1,SO:0001217,UniParc:UPI0000048026,UniRef:UniRef100_P0A0H0,UniRef:UniRef50_P0A0H0,UniRef:UniRef90_P0A0H0
contig_1	Pyrodigal	gene	598177	598647	.	+	.	ID=GCA000560365_00557_gene;locus_tag=GCA000560365_00557;gene=rpsG
contig_1	Pyrodigal	CDS	598177	598647	.	+	0	ID=GCA000560365_00557;Name=30S ribosomal protein S7;locus_tag=GCA000560365_00557;product=30S ribosomal protein S7;Dbxref=GO:0000049,GO:0003735,GO:0006412,GO:0015935,GO:0019843;gene=rpsG;Parent=GCA000560365_00557_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0049,COG:J,KEGG:K02992,RefSeq:WP_001137495.1,SO:0001217,UniParc:UPI000004801A,UniRef:UniRef100_P48940,UniRef:UniRef50_P02359,UniRef:UniRef90_P48940
contig_1	Pyrodigal	gene	598770	600851	.	+	.	ID=GCA000560365_00558_gene;locus_tag=GCA000560365_00558;gene=fusA
contig_1	Pyrodigal	CDS	598770	600851	.	+	0	ID=GCA000560365_00558;Name=elongation factor G FusA;locus_tag=GCA000560365_00558;product=elongation factor G FusA;Dbxref=GO:0003746,GO:0003924,GO:0005525,GO:0005737,GO:0006414,GO:0032790;gene=fusA;Parent=GCA000560365_00558_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0480,COG:J,KEGG:K02355,RefSeq:WP_000090315.1,SO:0001217,UniParc:UPI0000052287,UniRef:UniRef100_Q2G0N1,UniRef:UniRef50_Q9SI75,UniRef:UniRef90_Q2G0N1
contig_1	Pyrodigal	gene	601068	602252	.	+	.	ID=GCA000560365_00559_gene;locus_tag=GCA000560365_00559;gene=tuf
contig_1	Pyrodigal	CDS	601068	602252	.	+	0	ID=GCA000560365_00559;Name=elongation factor Tu;locus_tag=GCA000560365_00559;product=elongation factor Tu;Dbxref=GO:0003746,GO:0003924,GO:0005525,GO:0005829,GO:0006414;gene=tuf;Parent=GCA000560365_00559_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0050,COG:J,RefSeq:WP_001040568.1,SO:0001217,UniParc:UPI0000054837,UniRef:UniRef100_Q2G0N0,UniRef:UniRef50_Q74JU6,UniRef:UniRef90_Q2G0N0
contig_1	Pyrodigal	gene	602534	603709	.	-	.	ID=GCA000560365_00560_gene;locus_tag=GCA000560365_00560;gene=abgB
contig_1	Pyrodigal	CDS	602534	603709	.	-	0	ID=GCA000560365_00560;Name=Peptidase;locus_tag=GCA000560365_00560;product=Peptidase;gene=abgB;Parent=GCA000560365_00560_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1473,COG:R,RefSeq:WP_000887915.1,SO:0001217,UniParc:UPI00004B5B33,UniRef:UniRef100_Q2G0M9,UniRef:UniRef50_A0A2I7Y808,UniRef:UniRef90_A0A2I7Y808
contig_1	Pyrodigal	gene	603880	605067	.	+	.	ID=GCA000560365_00561_gene;locus_tag=GCA000560365_00561;gene=bioF
contig_1	Pyrodigal	CDS	603880	605067	.	+	0	ID=GCA000560365_00561;Name=glycine C-acetyltransferase;locus_tag=GCA000560365_00561;product=glycine C-acetyltransferase;Dbxref=GO:0008890,GO:0009058,GO:0016740,GO:0030170;gene=bioF;Parent=GCA000560365_00561_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0156,COG:H,RefSeq:WP_000250824.1,SO:0001217,UniParc:UPI00004B5B34,UniRef:UniRef100_Q5HIC5,UniRef:UniRef50_Q73KM3,UniRef:UniRef90_P60121;ec_number=2.3.1.29
contig_1	Pyrodigal	gene	605333	606211	.	+	.	ID=GCA000560365_00562_gene;locus_tag=GCA000560365_00562;gene=hchA
contig_1	Pyrodigal	CDS	605333	606211	.	+	0	ID=GCA000560365_00562;Name=glyoxalase III HchA;locus_tag=GCA000560365_00562;product=glyoxalase III HchA;Dbxref=GO:0005737,GO:0006281,GO:0016790,GO:0019172,GO:0019243,GO:0030091,GO:0036524;gene=hchA;Parent=GCA000560365_00562_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0693,COG:V,KEGG:K05523,RefSeq:WP_000076404.1,SO:0001217,UniParc:UPI0000054833,UniRef:UniRef100_Q2G0M7,UniRef:UniRef50_Q2G0M7,UniRef:UniRef90_Q2G0M7;ec_number=3.5.1.124
contig_1	Pyrodigal	gene	606371	608008	.	+	.	ID=GCA000560365_00563_gene;locus_tag=GCA000560365_00563;gene=araB
contig_1	Pyrodigal	CDS	606371	608008	.	+	0	ID=GCA000560365_00563;Name=ribulokinase;locus_tag=GCA000560365_00563;product=ribulokinase;Dbxref=GO:0005524,GO:0005737,GO:0008741,GO:0019150,GO:0019569;gene=araB;Parent=GCA000560365_00563_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1069,COG:G,RefSeq:WP_000122340.1,SO:0001217,UniParc:UPI00004B5B35,UniRef:UniRef100_Q2G0M6,UniRef:UniRef50_Q2G0M6,UniRef:UniRef90_Q2G0M6;ec_number=2.7.1.16
contig_1	Pyrodigal	gene	608222	609187	.	+	.	ID=GCA000560365_00564_gene;locus_tag=GCA000560365_00564;gene=wcaG
contig_1	Pyrodigal	CDS	608222	609187	.	+	0	ID=GCA000560365_00564;Name=putative epimerase/dehydratase SAR0558;locus_tag=GCA000560365_00564;product=putative epimerase/dehydratase SAR0558;Dbxref=GO:0006567,GO:0008743;gene=wcaG;Parent=GCA000560365_00564_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0451,COG:M,RefSeq:WP_000723301.1,SO:0001217,UniParc:UPI0000054831,UniRef:UniRef100_Q2G0M5,UniRef:UniRef50_Q2G0M5,UniRef:UniRef90_Q2G0M5
contig_1	Pyrodigal	gene	609522	610598	.	+	.	ID=GCA000560365_00565_gene;locus_tag=GCA000560365_00565;gene=ilvE
contig_1	Pyrodigal	CDS	609522	610598	.	+	0	ID=GCA000560365_00565;Name=branched-chain amino acid aminotransferase;locus_tag=GCA000560365_00565;product=branched-chain amino acid aminotransferase;Dbxref=GO:0004084,GO:0009081,GO:0009097,GO:0009098,GO:0009099,GO:0052655,GO:0052656;gene=ilvE;Parent=GCA000560365_00565_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0115,COG:EH,KEGG:K00826,RefSeq:WP_000076036.1,SO:0001217,UniParc:UPI0000054830,UniRef:UniRef100_Q5HIC1,UniRef:UniRef50_Q8CQ78,UniRef:UniRef90_Q5HIC1;ec_number=2.6.1.42
contig_1	Pyrodigal	gene	610848	611531	.	+	.	ID=GCA000560365_00566_gene;locus_tag=GCA000560365_00566;gene=gph
contig_1	Pyrodigal	CDS	610848	611531	.	+	0	ID=GCA000560365_00566;Name=HAD family hydrolase;locus_tag=GCA000560365_00566;product=HAD family hydrolase;gene=gph;Parent=GCA000560365_00566_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0546,RefSeq:WP_000454784.1,SO:0001217,UniParc:UPI00000D9CAE,UniRef:UniRef100_Q2G0M2,UniRef:UniRef50_A0A2Y2GZN0,UniRef:UniRef90_A0A2Y2GZN0
contig_1	Pyrodigal	gene	611647	612309	.	-	.	ID=GCA000560365_00567_gene;locus_tag=GCA000560365_00567;gene=dck
contig_1	Pyrodigal	CDS	611647	612309	.	-	0	ID=GCA000560365_00567;Name=Deoxyadenosine/deoxycytidine kinase;locus_tag=GCA000560365_00567;product=Deoxyadenosine/deoxycytidine kinase;gene=dck;Parent=GCA000560365_00567_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1428,COG:F,RefSeq:WP_001067262.1,SO:0001217,UniParc:UPI000005482D,UniRef:UniRef100_Q2G0M1,UniRef:UniRef50_P37529,UniRef:UniRef90_A0A0U1MET2
contig_1	Pyrodigal	gene	612302	612919	.	-	.	ID=GCA000560365_00568_gene;locus_tag=GCA000560365_00568;gene=dck
contig_1	Pyrodigal	CDS	612302	612919	.	-	0	ID=GCA000560365_00568;Name=Deoxynucleoside kinase domain-containing protein;locus_tag=GCA000560365_00568;product=Deoxynucleoside kinase domain-containing protein;gene=dck;Parent=GCA000560365_00568_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1428,COG:F,KEGG:K15518,RefSeq:WP_001039519.1,SO:0001217,UniParc:UPI000005482C,UniRef:UniRef100_Q2G0M0,UniRef:UniRef50_A0A380GAH5,UniRef:UniRef90_Q2G0M0;ec_number=2.7.1.113
contig_1	Pyrodigal	gene	612986	613456	.	+	.	ID=GCA000560365_00569_gene;locus_tag=GCA000560365_00569;gene=tadA
contig_1	Pyrodigal	CDS	612986	613456	.	+	0	ID=GCA000560365_00569;Name=tRNA adenosine(34) deaminase TadA;locus_tag=GCA000560365_00569;product=tRNA adenosine(34) deaminase TadA;Dbxref=GO:0002100,GO:0008251,GO:0008270,GO:0052717;gene=tadA;Parent=GCA000560365_00569_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0590,COG:J,KEGG:K11991,RefSeq:WP_000180281.1,SO:0001217,UniParc:UPI000005482B,UniRef:UniRef100_Q99W51,UniRef:UniRef50_Q99W51,UniRef:UniRef90_Q99W51;ec_number=3.5.4.33
contig_1	Pyrodigal	gene	613603	614472	.	+	.	ID=GCA000560365_00570_gene;locus_tag=GCA000560365_00570;gene=cof
contig_1	Pyrodigal	CDS	613603	614472	.	+	0	ID=GCA000560365_00570;Name=Cof-type HAD-IIB family hydrolase;locus_tag=GCA000560365_00570;product=Cof-type HAD-IIB family hydrolase;gene=cof;Parent=GCA000560365_00570_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0561,COG:HR,KEGG:K21064,RefSeq:WP_000593367.1,SO:0001217,UniParc:UPI000005482A,UniRef:UniRef100_Q2G0L8,UniRef:UniRef50_Q2G0L8,UniRef:UniRef90_Q2G0L8;ec_number=3.1.3.104
contig_1	Pyrodigal	gene	614493	615059	.	+	.	ID=GCA000560365_00571_gene;locus_tag=GCA000560365_00571;gene=azo1
contig_1	Pyrodigal	CDS	614493	615059	.	+	0	ID=GCA000560365_00571;Name=FMN-dependent NADPH-azoreductase;locus_tag=GCA000560365_00571;product=FMN-dependent NADPH-azoreductase;Dbxref=GO:0005829,GO:0010181,GO:0016491;gene=azo1;Parent=GCA000560365_00571_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0431,RefSeq:WP_000677261.1,SO:0001217,UniParc:UPI0000054828,UniRef:UniRef100_Q2G0L7,UniRef:UniRef50_Q2G0L7,UniRef:UniRef90_Q2G0L7;ec_number=1.7.-.-
contig_1	Pyrodigal	gene	615490	618333	.	+	.	ID=GCA000560365_00572_gene;locus_tag=GCA000560365_00572;gene=sdrC
contig_1	Pyrodigal	CDS	615490	618333	.	+	0	ID=GCA000560365_00572;Name=Ser-Asp rich fibrinogen-binding bone sialoprotein-binding protein;locus_tag=GCA000560365_00572;product=Ser-Asp rich fibrinogen-binding bone sialoprotein-binding protein;Dbxref=GO:0005576,GO:0007155;gene=sdrC;Parent=GCA000560365_00572_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_031808139.1,SO:0001217,UniParc:UPI00044808D1,UniRef:UniRef100_UPI00044808D1,UniRef:UniRef50_O86487,UniRef:UniRef90_O86487,VFDB:VFC0001,VFDB:VFG001279
contig_1	Pyrodigal	gene	618700	622845	.	+	.	ID=GCA000560365_00573_gene;locus_tag=GCA000560365_00573;gene=sdrD
contig_1	Pyrodigal	CDS	618700	622845	.	+	0	ID=GCA000560365_00573;Name=MSCRAMM family adhesin SdrD;locus_tag=GCA000560365_00573;product=MSCRAMM family adhesin SdrD;Dbxref=GO:0005576,GO:0007155;gene=sdrD;Parent=GCA000560365_00573_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000934401,COG:COG4932,COG:M,RefSeq:WP_000934424.1,SO:0001217,UniParc:UPI00004B5B37,UniRef:UniRef100_Q2FJ78,UniRef:UniRef50_Q2G0L4,UniRef:UniRef90_Q2G0L4
contig_1	Pyrodigal	gene	623239	626703	.	+	.	ID=GCA000560365_00574_gene;locus_tag=GCA000560365_00574;gene=sdrE
contig_1	Pyrodigal	CDS	623239	626703	.	+	0	ID=GCA000560365_00574;Name=Ser-Asp rich fibrinogen-binding bone sialoprotein-binding protein;locus_tag=GCA000560365_00574;product=Ser-Asp rich fibrinogen-binding bone sialoprotein-binding protein;Dbxref=GO:0005576,GO:0007155;gene=sdrE;Parent=GCA000560365_00574_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000610319.1,SO:0001217,UniParc:UPI0000696BC7,UniRef:UniRef100_Q2FJ77,UniRef:UniRef50_Q14U76,UniRef:UniRef90_O86489,VFDB:VFC0001,VFDB:VFG001281
contig_1	Pyrodigal	gene	626822	628294	.	+	.	ID=GCA000560365_00575_gene;locus_tag=GCA000560365_00575;gene=rfaB
contig_1	Pyrodigal	CDS	626822	628294	.	+	0	ID=GCA000560365_00575;Name=Glycosyltransferase;locus_tag=GCA000560365_00575;product=Glycosyltransferase;gene=rfaB;Parent=GCA000560365_00575_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0438,COG:M,RefSeq:WP_001106738.1,SO:0001217,UniParc:UPI0000054825,UniRef:UniRef100_Q2G0L3,UniRef:UniRef50_A0AAE2ZQD7,UniRef:UniRef90_A0AAE2ZQD7
contig_1	Pyrodigal	gene	628418	629908	.	-	.	ID=GCA000560365_00576_gene;locus_tag=GCA000560365_00576;gene=rfaB
contig_1	Pyrodigal	CDS	628418	629908	.	-	0	ID=GCA000560365_00576;Name=Glycosyl transferase family 1 domain-containing protein;locus_tag=GCA000560365_00576;product=Glycosyl transferase family 1 domain-containing protein;gene=rfaB;Parent=GCA000560365_00576_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0438,COG:M,RefSeq:WP_001106113.1,SO:0001217,UniParc:UPI0000054824,UniRef:UniRef100_Q2G0L2,UniRef:UniRef50_Q2G0L2,UniRef:UniRef90_Q2G0L2
contig_1	Pyrodigal	gene	630190	631068	.	-	.	ID=GCA000560365_00577_gene;locus_tag=GCA000560365_00577;gene=folE2
contig_1	Pyrodigal	CDS	630190	631068	.	-	0	ID=GCA000560365_00577;Name=GTP cyclohydrolase FolE2;locus_tag=GCA000560365_00577;product=GTP cyclohydrolase FolE2;Dbxref=GO:0003933,GO:0003934,GO:0046654;gene=folE2;Parent=GCA000560365_00577_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1469,COG:H,KEGG:K09007,RefSeq:WP_000134232.1,SO:0001217,UniParc:UPI0000054823,UniRef:UniRef100_Q2G0L1,UniRef:UniRef50_Q2G0L1,UniRef:UniRef90_Q2G0L1;ec_number=3.5.4.16
contig_1	Pyrodigal	gene	631081	631746	.	-	.	ID=GCA000560365_00578_gene;locus_tag=GCA000560365_00578;gene=bshB2
contig_1	Pyrodigal	CDS	631081	631746	.	-	0	ID=GCA000560365_00578;Name=bacillithiol biosynthesis deacetylase BshB2;locus_tag=GCA000560365_00578;product=bacillithiol biosynthesis deacetylase BshB2;Dbxref=GO:0019213;gene=bshB2;Parent=GCA000560365_00578_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2120,COG:G,KEGG:K22135,RefSeq:WP_000129063.1,SO:0001217,UniParc:UPI00004B5B38,UniRef:UniRef100_Q2G0L0,UniRef:UniRef50_A0A8J4SJ37,UniRef:UniRef90_Q2G0L0;ec_number=3.5.1.-
contig_1	Pyrodigal	gene	631760	632122	.	-	.	ID=GCA000560365_00579_gene;locus_tag=GCA000560365_00579
contig_1	Pyrodigal	CDS	631760	632122	.	-	0	ID=GCA000560365_00579;Name=DUF1806 domain-containing protein;locus_tag=GCA000560365_00579;product=DUF1806 domain-containing protein;Parent=GCA000560365_00579_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001547756.1,SO:0001217,UniParc:UPI00004B5B39,UniRef:UniRef100_Q2G0K9,UniRef:UniRef50_A0A7U7JT15,UniRef:UniRef90_A0A7U7JT15
contig_1	Pyrodigal	gene	632398	633156	.	+	.	ID=GCA000560365_00580_gene;locus_tag=GCA000560365_00580;gene=nagB
contig_1	Pyrodigal	CDS	632398	633156	.	+	0	ID=GCA000560365_00580;Name=glucosamine-6-phosphate deaminase;locus_tag=GCA000560365_00580;product=glucosamine-6-phosphate deaminase;Dbxref=GO:0004342,GO:0005737,GO:0005975,GO:0006043,GO:0006044,GO:0006046,GO:0019262,GO:0042802;gene=nagB;Parent=GCA000560365_00580_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0363,COG:G,RefSeq:WP_000866415.1,SO:0001217,UniParc:UPI0000054820,UniRef:UniRef100_Q2G0K8,UniRef:UniRef50_Q2G0K8,UniRef:UniRef90_Q2G0K8;ec_number=3.5.99.6
contig_1	Pyrodigal	gene	633233	633865	.	+	.	ID=GCA000560365_00581_gene;locus_tag=GCA000560365_00581
contig_1	Pyrodigal	CDS	633233	633865	.	+	0	ID=GCA000560365_00581;Name=3-hexulose-6-phosphate synthase;locus_tag=GCA000560365_00581;product=3-hexulose-6-phosphate synthase;Dbxref=GO:0004590,GO:0006207,GO:0006730,GO:0019647,GO:0019854,GO:0033982,GO:0043801;Parent=GCA000560365_00581_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000422858.1,SO:0001217,UniParc:UPI0000696BC8,UniRef:UniRef100_Q2FJ70,UniRef:UniRef50_P42405,UniRef:UniRef90_Q2FJ70;ec_number=4.1.2.43
contig_1	Pyrodigal	gene	633867	634415	.	+	.	ID=GCA000560365_00582_gene;locus_tag=GCA000560365_00582;gene=gutQ
contig_1	Pyrodigal	CDS	633867	634415	.	+	0	ID=GCA000560365_00582;Name=6-phospho-3-hexuloisomerase (PHI);locus_tag=GCA000560365_00582;product=6-phospho-3-hexuloisomerase (PHI);gene=gutQ;Parent=GCA000560365_00582_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0794,COG:GM,KEGG:K08094,RefSeq:WP_001051594.1,SO:0001217,UniParc:UPI000005481D,UniRef:UniRef100_Q2G0K6,UniRef:UniRef50_A0A380G9B8,UniRef:UniRef90_A0A0U1MEX0;ec_number=5.3.1.27
contig_1	Pyrodigal	gene	634528	635175	.	+	.	ID=GCA000560365_00583_gene;locus_tag=GCA000560365_00583;gene=gph
contig_1	Pyrodigal	CDS	634528	635175	.	+	0	ID=GCA000560365_00583;Name=HAD family hydrolase;locus_tag=GCA000560365_00583;product=HAD family hydrolase;gene=gph;Parent=GCA000560365_00583_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0546,RefSeq:WP_000667097.1,SO:0001217,UniParc:UPI0000696BCA,UniRef:UniRef100_Q2G0K5,UniRef:UniRef50_A0A3M9EEU9,UniRef:UniRef90_A0A3M9EEU9
contig_1	Pyrodigal	gene	635677	637077	.	+	.	ID=GCA000560365_00584_gene;locus_tag=GCA000560365_00584;gene=proP
contig_1	Pyrodigal	CDS	635677	637077	.	+	0	ID=GCA000560365_00584;Name=Putative proline/betaine transporter;locus_tag=GCA000560365_00584;product=Putative proline/betaine transporter;Dbxref=GO:0005886,GO:0015293;gene=proP;Parent=GCA000560365_00584_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2814,COG:G,KEGG:K03762,RefSeq:WP_000347061.1,SO:0001217,UniParc:UPI00000CAA1A,UniRef:UniRef100_Q5HIA2,UniRef:UniRef50_Q4L3Q4,UniRef:UniRef90_Q5HIA2
contig_1	Pyrodigal	gene	637621	638997	.	+	.	ID=GCA000560365_00585_gene;locus_tag=GCA000560365_00585;gene=vraA
contig_1	Pyrodigal	CDS	637621	638997	.	+	0	ID=GCA000560365_00585;Name=Putative long chain fatty acid-CoA ligase VraA;locus_tag=GCA000560365_00585;product=Putative long chain fatty acid-CoA ligase VraA;Dbxref=GO:0006631,GO:0031956;gene=vraA;Parent=GCA000560365_00585_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0318,COG:I,RefSeq:WP_001100835.1,SO:0001217,UniParc:UPI00000D765B,UniRef:UniRef100_Q5HIA1,UniRef:UniRef50_Q5HIA1,UniRef:UniRef90_Q6GJ94;ec_number=6.2.1.-
contig_1	Pyrodigal	gene	638999	640138	.	+	.	ID=GCA000560365_00586_gene;locus_tag=GCA000560365_00586;gene=vraB
contig_1	Pyrodigal	CDS	638999	640138	.	+	0	ID=GCA000560365_00586;Name=Putative acetyl-CoA C-acetyltransferase VraB;locus_tag=GCA000560365_00586;product=Putative acetyl-CoA C-acetyltransferase VraB;Dbxref=GO:0003988,GO:0006635,GO:0010124;gene=vraB;Parent=GCA000560365_00586_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0183,COG:I,RefSeq:WP_001070676.1,SO:0001217,UniParc:UPI00000D7809,UniRef:UniRef100_Q7A2W9,UniRef:UniRef50_Q7A2W9,UniRef:UniRef90_Q7A2W9;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	640113	640478	.	+	.	ID=GCA000560365_00587_gene;locus_tag=GCA000560365_00587;gene=vraC
contig_1	Pyrodigal	CDS	640113	640478	.	+	0	ID=GCA000560365_00587;Name=Protein VraC;locus_tag=GCA000560365_00587;product=Protein VraC;gene=vraC;Parent=GCA000560365_00587_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001165058.1,SO:0001217,UniParc:UPI0000054818,UniRef:UniRef100_Q5HI99,UniRef:UniRef50_Q5HI99,UniRef:UniRef90_Q5HI99
contig_1	Pyrodigal	gene	640481	640750	.	+	.	ID=GCA000560365_00588_gene;locus_tag=GCA000560365_00588
contig_1	Pyrodigal	CDS	640481	640750	.	+	0	ID=GCA000560365_00588;Name=Phage protein;locus_tag=GCA000560365_00588;product=Phage protein;Parent=GCA000560365_00588_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000671099.1,SO:0001217,UniParc:UPI00000D7672,UniRef:UniRef100_X5EG78,UniRef:UniRef50_A0A7U7JSW5,UniRef:UniRef90_X5EG78
contig_1	Pyrodigal	gene	640951	641118	.	-	.	ID=GCA000560365_00589_gene;locus_tag=GCA000560365_00589;gene=vraX
contig_1	Pyrodigal	CDS	640951	641118	.	-	0	ID=GCA000560365_00589;Name=Protein VraX;locus_tag=GCA000560365_00589;product=Protein VraX;gene=vraX;Parent=GCA000560365_00589_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000587958.1,SO:0001217,UniParc:UPI0000054816,UniRef:UniRef100_Q5HI97,UniRef:UniRef50_Q5HRG9,UniRef:UniRef90_Q5HI97
contig_1	Pyrodigal	gene	641625	642455	.	-	.	ID=GCA000560365_00590_gene;locus_tag=GCA000560365_00590;gene=pdxK
contig_1	Pyrodigal	CDS	641625	642455	.	-	0	ID=GCA000560365_00590;Name=Putative pyridoxine kinase;locus_tag=GCA000560365_00590;product=Putative pyridoxine kinase;Dbxref=GO:0005524,GO:0005829,GO:0008478,GO:0008902,GO:0008972,GO:0009228,GO:0046872;gene=pdxK;Parent=GCA000560365_00590_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0351,COG:H,RefSeq:WP_001185462.1,SO:0001217,UniParc:UPI0000054815,UniRef:UniRef100_Q5HI96,UniRef:UniRef50_Q8CTQ7,UniRef:UniRef90_Q5HI96;ec_number=2.7.1.35
contig_1	Pyrodigal	gene	642639	643295	.	+	.	ID=GCA000560365_00591_gene;locus_tag=GCA000560365_00591;gene=ung
contig_1	Pyrodigal	CDS	642639	643295	.	+	0	ID=GCA000560365_00591;Name=uracil-DNA glycosylase;locus_tag=GCA000560365_00591;product=uracil-DNA glycosylase;Dbxref=GO:0004844,GO:0005737,GO:0006284,GO:0097510;gene=ung;Parent=GCA000560365_00591_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0692,COG:L,KEGG:K03648,RefSeq:WP_000455256.1,SO:0001217,UniParc:UPI0000054813,UniRef:UniRef100_Q2G0J7,UniRef:UniRef50_Q2G0J7,UniRef:UniRef90_Q2G0J7;ec_number=3.2.2.27
contig_1	Pyrodigal	gene	643296	643676	.	+	.	ID=GCA000560365_00592_gene;locus_tag=GCA000560365_00592;gene=ywdI
contig_1	Pyrodigal	CDS	643296	643676	.	+	0	ID=GCA000560365_00592;Name=YwdI family protein;locus_tag=GCA000560365_00592;product=YwdI family protein;gene=ywdI;Parent=GCA000560365_00592_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000934517.1,SO:0001217,UniParc:UPI0000054812,UniRef:UniRef100_Q2G0J6,UniRef:UniRef50_Q2G0J6,UniRef:UniRef90_Q2G0J6
contig_1	Pyrodigal	gene	643809	644177	.	+	.	ID=GCA000560365_00593_gene;locus_tag=GCA000560365_00593;gene=ygdD
contig_1	Pyrodigal	CDS	643809	644177	.	+	0	ID=GCA000560365_00593;Name=UPF0382 membrane protein SACOL0629;locus_tag=GCA000560365_00593;product=UPF0382 membrane protein SACOL0629;Dbxref=GO:0005886;gene=ygdD;Parent=GCA000560365_00593_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2363,COG:S,RefSeq:WP_000765183.1,SO:0001217,UniParc:UPI0000054811,UniRef:UniRef100_Q2G0J5,UniRef:UniRef50_Q5HRG3,UniRef:UniRef90_Q2G0J5
contig_1	Pyrodigal	gene	644298	645782	.	+	.	ID=GCA000560365_00594_gene;locus_tag=GCA000560365_00594;gene=potE
contig_1	Pyrodigal	CDS	644298	645782	.	+	0	ID=GCA000560365_00594;Name=APC family permease;locus_tag=GCA000560365_00594;product=APC family permease;gene=potE;Parent=GCA000560365_00594_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0531,COG:E,RefSeq:WP_000412514.1,SO:0001217,UniParc:UPI00000CAC23,UniRef:UniRef100_Q2G0J4,UniRef:UniRef50_Q2G0J4,UniRef:UniRef90_Q2G0J4
contig_1	Pyrodigal	gene	645924	646376	.	-	.	ID=GCA000560365_00595_gene;locus_tag=GCA000560365_00595;gene=yjjB
contig_1	Pyrodigal	CDS	645924	646376	.	-	0	ID=GCA000560365_00595;Name=Threonine/Serine exporter ThrE domain-containing protein;locus_tag=GCA000560365_00595;product=Threonine/Serine exporter ThrE domain-containing protein;gene=yjjB;Parent=GCA000560365_00595_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG3610,RefSeq:WP_000498572.1,SO:0001217,UniParc:UPI000005480F,UniRef:UniRef100_Q2G0J3,UniRef:UniRef50_Q2G0J3,UniRef:UniRef90_Q2G0J3
contig_1	Pyrodigal	gene	646389	647153	.	-	.	ID=GCA000560365_00596_gene;locus_tag=GCA000560365_00596;gene=yjjP
contig_1	Pyrodigal	CDS	646389	647153	.	-	0	ID=GCA000560365_00596;Name=Threonine/serine exporter-like N-terminal domain-containing protein;locus_tag=GCA000560365_00596;product=Threonine/serine exporter-like N-terminal domain-containing protein;gene=yjjP;Parent=GCA000560365_00596_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG2966,RefSeq:WP_000354088.1,SO:0001217,UniParc:UPI0000052269,UniRef:UniRef100_Q2G0J2,UniRef:UniRef50_Q2G0J2,UniRef:UniRef90_Q2G0J2
contig_1	Infernal	gene	647394	647532	.	+	.	ID=GCA000560365_00597_gene;locus_tag=GCA000560365_00597;gene=rsaA
contig_1	Infernal	ncRNA	647394	647532	6.3e-17	+	.	ID=GCA000560365_00597;Name=RNA Staph. aureus A;locus_tag=GCA000560365_00597;gene=rsaA;product=RNA Staph. aureus A;Dbxref=RFAM:RF01816;Parent=GCA000560365_00597_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01816
contig_1	Pyrodigal	gene	647702	648454	.	-	.	ID=GCA000560365_00598_gene;locus_tag=GCA000560365_00598;gene=hemQ
contig_1	Pyrodigal	CDS	647702	648454	.	-	0	ID=GCA000560365_00598;Name=hydrogen peroxide-dependent heme synthase;locus_tag=GCA000560365_00598;product=hydrogen peroxide-dependent heme synthase;Dbxref=GO:0004601,GO:0006783,GO:0006785,GO:0020037,GO:0046872;gene=hemQ;Parent=GCA000560365_00598_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3253,COG:HP,RefSeq:WP_000075703.1,SO:0001217,UniParc:UPI000005480E,UniRef:UniRef100_Q2G0J1,UniRef:UniRef50_Q8Y5F1,UniRef:UniRef90_Q2G0J1;ec_number=1.3.98.5
contig_1	Pyrodigal	gene	648622	649608	.	+	.	ID=GCA000560365_00599_gene;locus_tag=GCA000560365_00599;gene=pta
contig_1	Pyrodigal	CDS	648622	649608	.	+	0	ID=GCA000560365_00599;Name=phosphate acetyltransferase;locus_tag=GCA000560365_00599;product=phosphate acetyltransferase;Dbxref=GO:0005737,GO:0006085,GO:0006086,GO:0008959;gene=pta;Parent=GCA000560365_00599_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0280,RefSeq:WP_000774281.1,SO:0001217,UniParc:UPI000005480C,UniRef:UniRef100_Q5HI88,UniRef:UniRef50_P39646,UniRef:UniRef90_Q6GJ80;ec_number=2.3.1.8
contig_1	Pyrodigal	gene	649611	650447	.	+	.	ID=GCA000560365_00600_gene;locus_tag=GCA000560365_00600;gene=lipL
contig_1	Pyrodigal	CDS	649611	650447	.	+	0	ID=GCA000560365_00600;Name=Octanoyl-[GcvH]:protein N-octanoyltransferase;locus_tag=GCA000560365_00600;product=Octanoyl-[GcvH]:protein N-octanoyltransferase;Dbxref=GO:0009107,GO:0033819;gene=lipL;Parent=GCA000560365_00600_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0095,COG:H,KEGG:K16869,RefSeq:WP_000362357.1,SO:0001217,UniParc:UPI000005480B,UniRef:UniRef100_Q2G0I9,UniRef:UniRef50_Q2G0I9,UniRef:UniRef90_Q2G0I9;ec_number=2.3.1.204
contig_1	Pyrodigal	gene	651034	651954	.	+	.	ID=GCA000560365_00601_gene;locus_tag=GCA000560365_00601;gene=mvk
contig_1	Pyrodigal	CDS	651034	651954	.	+	0	ID=GCA000560365_00601;Name=mevalonate kinase;locus_tag=GCA000560365_00601;product=mevalonate kinase;Dbxref=GO:0004496,GO:0005524,GO:0005737,GO:0016126,GO:0019287;gene=mvk;Parent=GCA000560365_00601_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1577,COG:I,KEGG:K00869,RefSeq:WP_000197034.1,SO:0001217,UniParc:UPI000005480A,UniRef:UniRef100_Q2G0I8,UniRef:UniRef50_A0A2K4AEE5,UniRef:UniRef90_A0A2K4AEE5;ec_number=2.7.1.36
contig_1	Pyrodigal	gene	651959	652942	.	+	.	ID=GCA000560365_00602_gene;locus_tag=GCA000560365_00602;gene=mvaD
contig_1	Pyrodigal	CDS	651959	652942	.	+	0	ID=GCA000560365_00602;Name=diphosphomevalonate decarboxylase;locus_tag=GCA000560365_00602;product=diphosphomevalonate decarboxylase;Dbxref=GO:0004163,GO:0005829,GO:0019287;gene=mvaD;Parent=GCA000560365_00602_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3407,COG:I,KEGG:K01597,RefSeq:WP_000597335.1,SO:0001217,UniParc:UPI00000D9CBE,UniRef:UniRef100_Q2G0I7,UniRef:UniRef50_Q9FD68,UniRef:UniRef90_Q9FD84;ec_number=4.1.1.33
contig_1	Pyrodigal	gene	652955	654031	.	+	.	ID=GCA000560365_00603_gene;locus_tag=GCA000560365_00603;gene=eRG12
contig_1	Pyrodigal	CDS	652955	654031	.	+	0	ID=GCA000560365_00603;Name=phosphomevalonate kinase;locus_tag=GCA000560365_00603;product=phosphomevalonate kinase;Dbxref=GO:0004631,GO:0016126,GO:0019287;gene=eRG12;Parent=GCA000560365_00603_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1577,COG:I,KEGG:K00938,RefSeq:WP_000616888.1,SO:0001217,UniParc:UPI0000696BCB,UniRef:UniRef100_A0A0E8GDF5,UniRef:UniRef50_B9DKS0,UniRef:UniRef90_A0A077VHR5;ec_number=2.7.4.2
contig_1	Pyrodigal	gene	654208	654549	.	+	.	ID=GCA000560365_00604_gene;locus_tag=GCA000560365_00604
contig_1	Pyrodigal	CDS	654208	654549	.	+	0	ID=GCA000560365_00604;Name=UPF0741 protein USA300HOU_0586;locus_tag=GCA000560365_00604;product=UPF0741 protein USA300HOU_0586;Parent=GCA000560365_00604_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000798968.1,SO:0001217,UniParc:UPI0000696BCC,UniRef:UniRef100_Q2FJ50,UniRef:UniRef50_Q2G0I5,UniRef:UniRef90_Q2G0I5
contig_1	Pyrodigal	gene	654601	655923	.	-	.	ID=GCA000560365_00605_gene;locus_tag=GCA000560365_00605;gene=merA
contig_1	Pyrodigal	CDS	654601	655923	.	-	0	ID=GCA000560365_00605;Name=hypothiocyanous acid reductase MerA;locus_tag=GCA000560365_00605;product=hypothiocyanous acid reductase MerA;Dbxref=GO:0016668,GO:0050660;gene=merA;Parent=GCA000560365_00605_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1249,KEGG:K21739,RefSeq:WP_000860581.1,SO:0001217,UniParc:UPI00004B5B3D,UniRef:UniRef100_A0A266CGC0,UniRef:UniRef50_A0A266CGC0,UniRef:UniRef90_A0A266CGC0
contig_1	Pyrodigal	gene	655910	656350	.	-	.	ID=GCA000560365_00606_gene;locus_tag=GCA000560365_00606;gene=hypR
contig_1	Pyrodigal	CDS	655910	656350	.	-	0	ID=GCA000560365_00606;Name=redox-sensitive transcriptional regulator HypR;locus_tag=GCA000560365_00606;product=redox-sensitive transcriptional regulator HypR;gene=hypR;Parent=GCA000560365_00606_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1959,COG:K,RefSeq:WP_001047239.1,SO:0001217,UniParc:UPI00004B5B3E,UniRef:UniRef100_X5DT38,UniRef:UniRef50_Q2G0I3,UniRef:UniRef90_Q2G0I3
contig_1	Pyrodigal	gene	656975	658384	.	+	.	ID=GCA000560365_00607_gene;locus_tag=GCA000560365_00607
contig_1	Pyrodigal	CDS	656975	658384	.	+	0	ID=GCA000560365_00607;Name=LXG domain-containing protein;locus_tag=GCA000560365_00607;product=LXG domain-containing protein;Parent=GCA000560365_00607_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000020800.1,SO:0001217,UniParc:UPI00004B5B3F,UniRef:UniRef100_A0A0H2WVY8,UniRef:UniRef50_Q2G0I1,UniRef:UniRef90_Q2G0I1
contig_1	Pyrodigal	gene	658388	659014	.	+	.	ID=GCA000560365_00608_gene;locus_tag=GCA000560365_00608
contig_1	Pyrodigal	CDS	658388	659014	.	+	0	ID=GCA000560365_00608;Name=DUF443 domain-containing protein;locus_tag=GCA000560365_00608;product=DUF443 domain-containing protein;Parent=GCA000560365_00608_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000898356.1,SO:0001217,UniParc:UPI00004B5B40,UniRef:UniRef100_A0A0E7DYF4,UniRef:UniRef50_Q2G0I0,UniRef:UniRef90_Q2G0I0
contig_1	Pyrodigal	gene	659140	659781	.	+	.	ID=GCA000560365_00609_gene;locus_tag=GCA000560365_00609
contig_1	Pyrodigal	CDS	659140	659781	.	+	0	ID=GCA000560365_00609;Name=DUF443 domain-containing protein;locus_tag=GCA000560365_00609;product=DUF443 domain-containing protein;Parent=GCA000560365_00609_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000404342.1,SO:0001217,UniParc:UPI00004B5B41,UniRef:UniRef100_Q2G0H9,UniRef:UniRef50_Q2G0H7,UniRef:UniRef90_Q2G0H9
contig_1	Pyrodigal	gene	659869	660486	.	+	.	ID=GCA000560365_00610_gene;locus_tag=GCA000560365_00610
contig_1	Pyrodigal	CDS	659869	660486	.	+	0	ID=GCA000560365_00610;Name=DUF443 domain-containing protein;locus_tag=GCA000560365_00610;product=DUF443 domain-containing protein;Parent=GCA000560365_00610_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000882165.1,SO:0001217,UniParc:UPI00004B5B42,UniRef:UniRef100_Q2G0H8,UniRef:UniRef50_Q2G0H8,UniRef:UniRef90_Q2G0H8
contig_1	Pyrodigal	gene	660561	661190	.	+	.	ID=GCA000560365_00611_gene;locus_tag=GCA000560365_00611
contig_1	Pyrodigal	CDS	660561	661190	.	+	0	ID=GCA000560365_00611;Name=DUF443 domain-containing protein;locus_tag=GCA000560365_00611;product=DUF443 domain-containing protein;Parent=GCA000560365_00611_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000882146.1,SO:0001217,UniParc:UPI00000D9CC6,UniRef:UniRef100_Q2G0H7,UniRef:UniRef50_Q2G0H7,UniRef:UniRef90_Q2G0H7
contig_1	Pyrodigal	gene	661386	662006	.	+	.	ID=GCA000560365_00612_gene;locus_tag=GCA000560365_00612
contig_1	Pyrodigal	CDS	661386	662006	.	+	0	ID=GCA000560365_00612;Name=DUF443 domain-containing protein;locus_tag=GCA000560365_00612;product=DUF443 domain-containing protein;Parent=GCA000560365_00612_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000882085.1,SO:0001217,UniParc:UPI00004B5B43,UniRef:UniRef100_A0A0D6G608,UniRef:UniRef50_Q2G0H7,UniRef:UniRef90_Q2G0H5
contig_1	Pyrodigal	gene	662146	662778	.	+	.	ID=GCA000560365_00613_gene;locus_tag=GCA000560365_00613
contig_1	Pyrodigal	CDS	662146	662778	.	+	0	ID=GCA000560365_00613;Name=DUF443 domain-containing protein;locus_tag=GCA000560365_00613;product=DUF443 domain-containing protein;Parent=GCA000560365_00613_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000882112.1,SO:0001217,UniParc:UPI0001698548,UniRef:UniRef100_A0A2C9TX59,UniRef:UniRef50_Q2G0H4,UniRef:UniRef90_Q2G0H4
contig_1	Pyrodigal	gene	662825	662995	.	+	.	ID=GCA000560365_00614_gene;locus_tag=GCA000560365_00614
contig_1	Pyrodigal	CDS	662825	662995	.	+	0	ID=GCA000560365_00614;Name=DUF443 domain-containing protein;locus_tag=GCA000560365_00614;product=DUF443 domain-containing protein;Parent=GCA000560365_00614_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000197A88F,UniRef:UniRef100_Q2G0H3,UniRef:UniRef50_Q2G0H7,UniRef:UniRef90_Q2G0H3
contig_1	Pyrodigal	gene	663907	664536	.	+	.	ID=GCA000560365_00615_gene;locus_tag=GCA000560365_00615
contig_1	Pyrodigal	CDS	663907	664536	.	+	0	ID=GCA000560365_00615;Name=DUF443 domain-containing protein;locus_tag=GCA000560365_00615;product=DUF443 domain-containing protein;Parent=GCA000560365_00615_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000923036.1,SO:0001217,UniParc:UPI00000547F9,UniRef:UniRef100_Q2G0H1,UniRef:UniRef50_Q2G0H7,UniRef:UniRef90_Q2G0H1
contig_1	Pyrodigal	gene	664660	665301	.	+	.	ID=GCA000560365_00616_gene;locus_tag=GCA000560365_00616
contig_1	Pyrodigal	CDS	664660	665301	.	+	0	ID=GCA000560365_00616;Name=DUF443 domain-containing protein;locus_tag=GCA000560365_00616;product=DUF443 domain-containing protein;Parent=GCA000560365_00616_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000882182.1,SO:0001217,UniParc:UPI00000D9CCA,UniRef:UniRef100_Q2G0H0,UniRef:UniRef50_Q2G0H0,UniRef:UniRef90_Q2G0H0
contig_1	Pyrodigal	gene	665338	665973	.	+	.	ID=GCA000560365_00617_gene;locus_tag=GCA000560365_00617
contig_1	Pyrodigal	CDS	665338	665973	.	+	0	ID=GCA000560365_00617;Name=DUF443 domain-containing protein;locus_tag=GCA000560365_00617;product=DUF443 domain-containing protein;Parent=GCA000560365_00617_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000882123.1,SO:0001217,UniParc:UPI00003B1477,UniRef:UniRef100_Q2G0G9,UniRef:UniRef50_Q2G0H7,UniRef:UniRef90_Q2G0G9
contig_1	Pyrodigal	gene	665939	666184	.	+	.	ID=GCA000560365_00618_gene;locus_tag=GCA000560365_00618
contig_1	Pyrodigal	CDS	665939	666184	.	+	0	ID=GCA000560365_00618;Name=Phage protein;locus_tag=GCA000560365_00618;product=Phage protein;Parent=GCA000560365_00618_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00015FD74D,UniRef:UniRef100_A0A380EEB9,UniRef:UniRef50_A0A7I8NLS0,UniRef:UniRef90_A0A7I8NLS0
contig_1	Pyrodigal	gene	666208	666834	.	+	.	ID=GCA000560365_00619_gene;locus_tag=GCA000560365_00619
contig_1	Pyrodigal	CDS	666208	666834	.	+	0	ID=GCA000560365_00619;Name=DUF443 domain-containing protein;locus_tag=GCA000560365_00619;product=DUF443 domain-containing protein;Parent=GCA000560365_00619_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000923044.1,SO:0001217,UniParc:UPI00000547F4,UniRef:UniRef100_Q2G0G7,UniRef:UniRef50_Q2G0H7,UniRef:UniRef90_Q2G0G7
contig_1	Pyrodigal	gene	667104	668042	.	+	.	ID=GCA000560365_00620_gene;locus_tag=GCA000560365_00620;gene=pdxI
contig_1	Pyrodigal	CDS	667104	668042	.	+	0	ID=GCA000560365_00620;Name=NADP-dependent oxidoreductase domain-containing protein;locus_tag=GCA000560365_00620;product=NADP-dependent oxidoreductase domain-containing protein;gene=pdxI;Parent=GCA000560365_00620_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0667,COG:HR,KEGG:K06607,RefSeq:WP_000808902.1,SO:0001217,UniParc:UPI00000547F3,UniRef:UniRef100_Q2G0G6,UniRef:UniRef50_Q2G0G6,UniRef:UniRef90_Q2G0G6;ec_number=1.1.1.-
contig_1	Pyrodigal	gene	668253	668789	.	+	.	ID=GCA000560365_00621_gene;locus_tag=GCA000560365_00621;gene=wrbA
contig_1	Pyrodigal	CDS	668253	668789	.	+	0	ID=GCA000560365_00621;Name=FMN-dependent NADPH-azoreductase;locus_tag=GCA000560365_00621;product=FMN-dependent NADPH-azoreductase;gene=wrbA;Parent=GCA000560365_00621_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0655,RefSeq:WP_000633782.1,SO:0001217,UniParc:UPI00000547F2,UniRef:UniRef100_Q2G0G5,UniRef:UniRef50_A0A7U7PXP0,UniRef:UniRef90_A0A7U7PXP0
contig_1	Pyrodigal	gene	668958	669434	.	+	.	ID=GCA000560365_00622_gene;locus_tag=GCA000560365_00622;gene=rimI
contig_1	Pyrodigal	CDS	668958	669434	.	+	0	ID=GCA000560365_00622;Name=N-acetyltransferase domain-containing protein;locus_tag=GCA000560365_00622;product=N-acetyltransferase domain-containing protein;gene=rimI;Parent=GCA000560365_00622_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0456,COG:J,RefSeq:WP_000477504.1,SO:0001217,UniParc:UPI00000547F1,UniRef:UniRef100_Q2G0G4,UniRef:UniRef50_Q2G0G4,UniRef:UniRef90_Q2G0G4
contig_1	Pyrodigal	gene	669474	670769	.	+	.	ID=GCA000560365_00623_gene;locus_tag=GCA000560365_00623;gene=ydhJ
contig_1	Pyrodigal	CDS	669474	670769	.	+	0	ID=GCA000560365_00623;Name=HD domain-containing protein;locus_tag=GCA000560365_00623;product=HD domain-containing protein;gene=ydhJ;Parent=GCA000560365_00623_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1078,COG:R,RefSeq:WP_000180230.1,SO:0001217,UniParc:UPI00000547F0,UniRef:UniRef100_Q2G0G3,UniRef:UniRef50_P39651,UniRef:UniRef90_Q2G0G3
contig_1	Pyrodigal	gene	670812	671318	.	+	.	ID=GCA000560365_00624_gene;locus_tag=GCA000560365_00624
contig_1	Pyrodigal	CDS	670812	671318	.	+	0	ID=GCA000560365_00624;Name=Cytosolic protein;locus_tag=GCA000560365_00624;product=Cytosolic protein;Parent=GCA000560365_00624_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D9CCC,UniRef:UniRef100_A0A7Z7QX47,UniRef:UniRef50_A0A0U1MGP2,UniRef:UniRef90_A0A0U1MGP2
contig_1	Pyrodigal	gene	671817	672827	.	+	.	ID=GCA000560365_00625_gene;locus_tag=GCA000560365_00625;gene=adhP
contig_1	Pyrodigal	CDS	671817	672827	.	+	0	ID=GCA000560365_00625;Name=alcohol dehydrogenase AdhP;locus_tag=GCA000560365_00625;product=alcohol dehydrogenase AdhP;Dbxref=GO:0004022,GO:0008270;gene=adhP;Parent=GCA000560365_00625_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1064,COG:G,KEGG:K13953,RefSeq:WP_001200748.1,SO:0001217,UniParc:UPI00000547EE,UniRef:UniRef100_Q2G0G1,UniRef:UniRef50_P20368,UniRef:UniRef90_Q2G0G1;ec_number=1.1.1.1
contig_1	Pyrodigal	gene	672902	673009	.	+	.	ID=GCA000560365_00626_gene;locus_tag=GCA000560365_00626
contig_1	Pyrodigal	CDS	672902	673009	.	+	0	ID=GCA000560365_00626;Name=hypothetical protein;locus_tag=GCA000560365_00626;product=hypothetical protein;Parent=GCA000560365_00626_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000655099.1,SO:0001217,UniParc:UPI00000547ED,UniRef:UniRef100_Q2G0G0,UniRef:UniRef50_Q2G0G0,UniRef:UniRef90_Q2G0G0
contig_1	Pyrodigal	gene	673102	673518	.	+	.	ID=GCA000560365_00627_gene;locus_tag=GCA000560365_00627;gene=ywiB
contig_1	Pyrodigal	CDS	673102	673518	.	+	0	ID=GCA000560365_00627;Name=DUF1934 domain-containing protein;locus_tag=GCA000560365_00627;product=DUF1934 domain-containing protein;gene=ywiB;Parent=GCA000560365_00627_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4506,COG:S,RefSeq:WP_000359086.1,SO:0001217,UniParc:UPI00006E396E,UniRef:UniRef100_W8U168,UniRef:UniRef50_A0A0D0SIW2,UniRef:UniRef90_A0A077V1W0
contig_1	Pyrodigal	gene	673515	675176	.	+	.	ID=GCA000560365_00628_gene;locus_tag=GCA000560365_00628;gene=argS
contig_1	Pyrodigal	CDS	673515	675176	.	+	0	ID=GCA000560365_00628;Name=arginine--tRNA ligase;locus_tag=GCA000560365_00628;product=arginine--tRNA ligase;Dbxref=GO:0004814,GO:0005524,GO:0005737,GO:0006420;gene=argS;Parent=GCA000560365_00628_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0018,COG:J,KEGG:K01887,RefSeq:WP_001021145.1,SO:0001217,UniParc:UPI00000547EA,UniRef:UniRef100_Q2G0F8,UniRef:UniRef50_P46906,UniRef:UniRef90_Q2G0F8;ec_number=6.1.1.19
contig_1	Infernal	gene	675336	675555	.	-	.	ID=GCA000560365_00629_gene;locus_tag=GCA000560365_00629;gene=S35
contig_1	Infernal	ncRNA	675336	675555	2.8e-17	-	.	ID=GCA000560365_00629;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000560365_00629;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000560365_00629_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	675564	676199	.	+	.	ID=GCA000560365_00630_gene;locus_tag=GCA000560365_00630;gene=hP0602
contig_1	Pyrodigal	CDS	675564	676199	.	+	0	ID=GCA000560365_00630;Name=Endonuclease III;locus_tag=GCA000560365_00630;product=Endonuclease III;gene=hP0602;Parent=GCA000560365_00630_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2231,COG:L,KEGG:K07457,RefSeq:WP_000901764.1,SO:0001217,UniParc:UPI00000547E9,UniRef:UniRef100_Q2G0F7,UniRef:UniRef50_A0A0R2GA19,UniRef:UniRef90_A0A0U1MF38
contig_1	Pyrodigal	gene	676578	677465	.	+	.	ID=GCA000560365_00631_gene;locus_tag=GCA000560365_00631;gene=fepB
contig_1	Pyrodigal	CDS	676578	677465	.	+	0	ID=GCA000560365_00631;Name=ABC transporter substrate-binding protein;locus_tag=GCA000560365_00631;product=ABC transporter substrate-binding protein;gene=fepB;Parent=GCA000560365_00631_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0614,COG:P,RefSeq:WP_000749059.1,SO:0001217,UniParc:UPI00004B5B46,UniRef:UniRef100_X5EJU1,UniRef:UniRef50_A0A380G1W9,UniRef:UniRef90_A0A6K1MU86
contig_1	Pyrodigal	gene	677577	678563	.	+	.	ID=GCA000560365_00632_gene;locus_tag=GCA000560365_00632;gene=fepD
contig_1	Pyrodigal	CDS	677577	678563	.	+	0	ID=GCA000560365_00632;Name=ABC-type Fe3+-siderophore transport system%2C permease component;locus_tag=GCA000560365_00632;product=ABC-type Fe3+-siderophore transport system%2C permease component;gene=fepD;Parent=GCA000560365_00632_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0609,COG:P,SO:0001217,UniParc:UPI00015FD74E,UniRef:UniRef100_Q2G0F5,UniRef:UniRef50_A0A1D4I031,UniRef:UniRef90_Q2G0F5
contig_1	Pyrodigal	gene	678618	679337	.	+	.	ID=GCA000560365_00633_gene;locus_tag=GCA000560365_00633;gene=yigB
contig_1	Pyrodigal	CDS	678618	679337	.	+	0	ID=GCA000560365_00633;Name=HAD family hydrolase;locus_tag=GCA000560365_00633;product=HAD family hydrolase;gene=yigB;Parent=GCA000560365_00633_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1011,COG:H,RefSeq:WP_000365354.1,SO:0001217,UniParc:UPI00000547E7,UniRef:UniRef100_Q2G0F4,UniRef:UniRef50_A0A380G976,UniRef:UniRef90_A0A2K4AEL0
contig_1	Pyrodigal	gene	679321	680121	.	+	.	ID=GCA000560365_00634_gene;locus_tag=GCA000560365_00634;gene=menH
contig_1	Pyrodigal	CDS	679321	680121	.	+	0	ID=GCA000560365_00634;Name=3-oxoadipate enol-lactonase;locus_tag=GCA000560365_00634;product=3-oxoadipate enol-lactonase;gene=menH;Parent=GCA000560365_00634_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0596,COG:HR,RefSeq:WP_000362967.1,SO:0001217,UniParc:UPI00004B5B47,UniRef:UniRef100_Q2G0F3,UniRef:UniRef50_A0A0Y9U704,UniRef:UniRef90_A0A0Y9U704
contig_1	Pyrodigal	gene	680257	680763	.	+	.	ID=GCA000560365_00635_gene;locus_tag=GCA000560365_00635
contig_1	Pyrodigal	CDS	680257	680763	.	+	0	ID=GCA000560365_00635;Name=SA0570 family protein;locus_tag=GCA000560365_00635;product=SA0570 family protein;Parent=GCA000560365_00635_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000735558.1,SO:0001217,UniParc:UPI00000D76AE,UniRef:UniRef100_Q2G0F2,UniRef:UniRef50_Q49VF9,UniRef:UniRef90_A0A2K4AED1
contig_1	Pyrodigal	gene	680925	681641	.	+	.	ID=GCA000560365_00636_gene;locus_tag=GCA000560365_00636
contig_1	Pyrodigal	CDS	680925	681641	.	+	0	ID=GCA000560365_00636;Name=DUF1129 domain-containing protein;locus_tag=GCA000560365_00636;product=DUF1129 domain-containing protein;Parent=GCA000560365_00636_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001222133.1,SO:0001217,UniParc:UPI00000D76FA,UniRef:UniRef100_Q2G0F1,UniRef:UniRef50_Q5HRC1,UniRef:UniRef90_A0A6H4BUY2
contig_1	Pyrodigal	gene	681810	682598	.	+	.	ID=GCA000560365_00637_gene;locus_tag=GCA000560365_00637;gene=menH
contig_1	Pyrodigal	CDS	681810	682598	.	+	0	ID=GCA000560365_00637;Name=AB hydrolase-1 domain-containing protein;locus_tag=GCA000560365_00637;product=AB hydrolase-1 domain-containing protein;gene=menH;Parent=GCA000560365_00637_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0596,COG:HR,RefSeq:WP_001045421.1,SO:0001217,UniParc:UPI00000547E3,UniRef:UniRef100_Q2G0F0,UniRef:UniRef50_Q2G0F0,UniRef:UniRef90_Q2G0F0
contig_1	Pyrodigal	gene	682849	683223	.	-	.	ID=GCA000560365_00638_gene;locus_tag=GCA000560365_00638;gene=sarA
contig_1	Pyrodigal	CDS	682849	683223	.	-	0	ID=GCA000560365_00638;Name=global transcriptional regulator SarA;locus_tag=GCA000560365_00638;product=global transcriptional regulator SarA;Dbxref=GO:0003677,GO:0003700,GO:0005737,GO:0006950,GO:0046872;gene=sarA;Parent=GCA000560365_00638_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1846,COG:K,RefSeq:WP_001018677.1,SO:0001217,UniParc:UPI000003718E,UniRef:UniRef100_Q2G2U9,UniRef:UniRef50_Q2G2U9,UniRef:UniRef90_Q2G2U9
contig_1	Infernal	gene	683388	683583	.	-	.	ID=GCA000560365_00639_gene;locus_tag=GCA000560365_00639;gene=Teg49
contig_1	Infernal	ncRNA	683388	683583	4.4e-31	-	.	ID=GCA000560365_00639;Name=Teg49 sRNA;locus_tag=GCA000560365_00639;product=Teg49 sRNA;Dbxref=RFAM:RF02696;Parent=GCA000560365_00639_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02696
contig_1	Pyrodigal	gene	684171	684731	.	-	.	ID=GCA000560365_00640_gene;locus_tag=GCA000560365_00640
contig_1	Pyrodigal	CDS	684171	684731	.	-	0	ID=GCA000560365_00640;Name=DMT family transporter;locus_tag=GCA000560365_00640;product=DMT family transporter;Parent=GCA000560365_00640_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K09936,SO:0001217,UniRef:UniRef50_UPI001F5851A8,UniRef:UniRef90_UPI0020280BB4
contig_1	Pyrodigal	gene	684939	685292	.	-	.	ID=GCA000560365_00641_gene;locus_tag=GCA000560365_00641;gene=tnp
contig_1	Pyrodigal	CDS	684939	685292	.	-	0	ID=GCA000560365_00641;Name=IS30 family ISSau5 transposase ORF B;locus_tag=GCA000560365_00641;product=IS30 family ISSau5 transposase ORF B;Dbxref=GO:0004803;gene=tnp;Parent=GCA000560365_00641_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000803507.1,SO:0001217,UniParc:UPI0001D0D071,UniRef:UniRef100_A0A5A8VL66,UniRef:UniRef50_A0A5S9C679,UniRef:UniRef90_A0A5S9C679
contig_1	Pyrodigal	gene	685456	685959	.	-	.	ID=GCA000560365_00642_gene;locus_tag=GCA000560365_00642;gene=tnp
contig_1	Pyrodigal	CDS	685456	685959	.	-	0	ID=GCA000560365_00642;Name=IS30 family ISSau5 transposase ORF A;locus_tag=GCA000560365_00642;product=IS30 family ISSau5 transposase ORF A;gene=tnp;Parent=GCA000560365_00642_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=IS:ISSau5,RefSeq:WP_000746375.1,SO:0001217,UniParc:UPI0001C0BFBA,UniRef:UniRef100_A0A0E8HLR7,UniRef:UniRef50_A0A380G5N9,UniRef:UniRef90_A0A0E8HLR7
contig_1	Pyrodigal	gene	686068	686424	.	-	.	ID=GCA000560365_00643_gene;locus_tag=GCA000560365_00643
contig_1	Pyrodigal	CDS	686068	686424	.	-	0	ID=GCA000560365_00643;Name=DUF4467 domain-containing protein;locus_tag=GCA000560365_00643;product=DUF4467 domain-containing protein;Parent=GCA000560365_00643_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001255379.1,SO:0001217,UniParc:UPI0000696C52,UniRef:UniRef100_B6V384,UniRef:UniRef50_A0A068W7G9,UniRef:UniRef90_A0A068W7G9
contig_1	Pyrodigal	gene	686480	687070	.	-	.	ID=GCA000560365_00644_gene;locus_tag=GCA000560365_00644
contig_1	Pyrodigal	CDS	686480	687070	.	-	0	ID=GCA000560365_00644;Name=Transposon-related protein;locus_tag=GCA000560365_00644;product=Transposon-related protein;Parent=GCA000560365_00644_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000810443.1,SO:0001217,UniParc:UPI00003B161A,UniRef:UniRef100_A0A0H2WW60,UniRef:UniRef50_A0A0H2WW60,UniRef:UniRef90_A0A0H2WW60
contig_1	Pyrodigal	gene	687077	688123	.	-	.	ID=GCA000560365_00645_gene;locus_tag=GCA000560365_00645
contig_1	Pyrodigal	CDS	687077	688123	.	-	0	ID=GCA000560365_00645;Name=CHAP domain-containing protein;locus_tag=GCA000560365_00645;product=CHAP domain-containing protein;Parent=GCA000560365_00645_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000247465.1,SO:0001217,UniParc:UPI0000696C53,UniRef:UniRef100_A0A5C8X3U9,UniRef:UniRef50_M9UWV1,UniRef:UniRef90_D3W9V6
contig_1	Pyrodigal	gene	688113	689960	.	-	.	ID=GCA000560365_00646_gene;locus_tag=GCA000560365_00646
contig_1	Pyrodigal	CDS	688113	689960	.	-	0	ID=GCA000560365_00646;Name=Mating channel protein;locus_tag=GCA000560365_00646;product=Mating channel protein;Parent=GCA000560365_00646_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000681154.1,SO:0001217,UniParc:UPI0000696C54,UniRef:UniRef100_A0A127JEY2,UniRef:UniRef50_A0A0U1MRL8,UniRef:UniRef90_A0A0U1MRL8
contig_1	Pyrodigal	gene	689965	691323	.	-	.	ID=GCA000560365_00647_gene;locus_tag=GCA000560365_00647
contig_1	Pyrodigal	CDS	689965	691323	.	-	0	ID=GCA000560365_00647;Name=FtsK/SpoIIIE family protein;locus_tag=GCA000560365_00647;product=FtsK/SpoIIIE family protein;Parent=GCA000560365_00647_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001251211.1,SO:0001217,UniParc:UPI0000696C55,UniRef:UniRef100_A0A6B0DD37,UniRef:UniRef50_D2JAR3,UniRef:UniRef90_D2JAR3
contig_1	Pyrodigal	gene	691377	693872	.	-	.	ID=GCA000560365_00648_gene;locus_tag=GCA000560365_00648
contig_1	Pyrodigal	CDS	691377	693872	.	-	0	ID=GCA000560365_00648;Name=DUF87 domain-containing protein;locus_tag=GCA000560365_00648;product=DUF87 domain-containing protein;Parent=GCA000560365_00648_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001049264.1,SO:0001217,UniParc:UPI00003B161E,UniRef:UniRef100_A0A7Z7QXW5,UniRef:UniRef50_A0A5S9ETT9,UniRef:UniRef90_A0A5S9ETT9
contig_1	Pyrodigal	gene	693907	694290	.	-	.	ID=GCA000560365_00649_gene;locus_tag=GCA000560365_00649
contig_1	Pyrodigal	CDS	693907	694290	.	-	0	ID=GCA000560365_00649;Name=Conjugal transfer protein;locus_tag=GCA000560365_00649;product=Conjugal transfer protein;Parent=GCA000560365_00649_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000358144.1,SO:0001217,UniParc:UPI00004B5C08,UniRef:UniRef100_A0A7Z7QXR8,UniRef:UniRef50_A0A5S9ETX5,UniRef:UniRef90_A0A5S9ETX5
contig_1	Pyrodigal	gene	694302	694562	.	-	.	ID=GCA000560365_00650_gene;locus_tag=GCA000560365_00650
contig_1	Pyrodigal	CDS	694302	694562	.	-	0	ID=GCA000560365_00650;Name=Transposon-related protein;locus_tag=GCA000560365_00650;product=Transposon-related protein;Parent=GCA000560365_00650_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000015639.1,SO:0001217,UniParc:UPI00004B5C09,UniRef:UniRef100_B6V391,UniRef:UniRef50_A0A0E1X7P8,UniRef:UniRef90_A0A0E1X7P8
contig_1	Pyrodigal	gene	694567	695622	.	-	.	ID=GCA000560365_00651_gene;locus_tag=GCA000560365_00651
contig_1	Pyrodigal	CDS	694567	695622	.	-	0	ID=GCA000560365_00651;Name=Conjugal transfer protein;locus_tag=GCA000560365_00651;product=Conjugal transfer protein;Parent=GCA000560365_00651_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000692003.1,SO:0001217,UniParc:UPI0000696C56,UniRef:UniRef100_A0A6B0DDF3,UniRef:UniRef50_A0A0U1MR86,UniRef:UniRef90_A0A0U1MR86
contig_1	Pyrodigal	gene	695683	696774	.	-	.	ID=GCA000560365_00652_gene;locus_tag=GCA000560365_00652
contig_1	Pyrodigal	CDS	695683	696774	.	-	0	ID=GCA000560365_00652;Name=Replication initiation protein-like C-terminal domain-containing protein;locus_tag=GCA000560365_00652;product=Replication initiation protein-like C-terminal domain-containing protein;Parent=GCA000560365_00652_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07467,RefSeq:WP_000172939.1,SO:0001217,UniParc:UPI0000696C57,UniRef:UniRef100_A0A5A8VJ43,UniRef:UniRef50_D2JLH7,UniRef:UniRef90_D2JLH7
contig_1	Pyrodigal	gene	696949	697251	.	-	.	ID=GCA000560365_00653_gene;locus_tag=GCA000560365_00653
contig_1	Pyrodigal	CDS	696949	697251	.	-	0	ID=GCA000560365_00653;Name=Transposon-related protein;locus_tag=GCA000560365_00653;product=Transposon-related protein;Parent=GCA000560365_00653_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000386891.1,SO:0001217,UniParc:UPI00003B1623,UniRef:UniRef100_A0A7Z7W163,UniRef:UniRef50_A0A068W5Y0,UniRef:UniRef90_A0A068W5Y0
contig_1	Pyrodigal	gene	697265	697585	.	-	.	ID=GCA000560365_00654_gene;locus_tag=GCA000560365_00654
contig_1	Pyrodigal	CDS	697265	697585	.	-	0	ID=GCA000560365_00654;Name=DUF961 domain-containing protein;locus_tag=GCA000560365_00654;product=DUF961 domain-containing protein;Parent=GCA000560365_00654_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_031808140.1,SO:0001217,UniParc:UPI000447AA47,UniRef:UniRef100_UPI000447AA47,UniRef:UniRef50_A0A380G6H8,UniRef:UniRef90_A0A0U1MRA0
contig_1	Pyrodigal	gene	697736	698020	.	-	.	ID=GCA000560365_00655_gene;locus_tag=GCA000560365_00655
contig_1	Pyrodigal	CDS	697736	698020	.	-	0	ID=GCA000560365_00655;Name=Transposon-related protein;locus_tag=GCA000560365_00655;product=Transposon-related protein;Parent=GCA000560365_00655_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000134545.1,SO:0001217,UniParc:UPI00004B5C0C,UniRef:UniRef100_B6V396,UniRef:UniRef50_A0A7U7ICX6,UniRef:UniRef90_A0A7U7ICX6
contig_1	Pyrodigal	gene	698056	698457	.	-	.	ID=GCA000560365_00656_gene;locus_tag=GCA000560365_00656
contig_1	Pyrodigal	CDS	698056	698457	.	-	0	ID=GCA000560365_00656;Name=EamA-like transporter family protein;locus_tag=GCA000560365_00656;product=EamA-like transporter family protein;Parent=GCA000560365_00656_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K09936,SO:0001217,UniParc:UPI0001D0CA6C,UniRef:UniRef100_A0A5A8VJ48,UniRef:UniRef50_A0A7Z7YS44,UniRef:UniRef90_A0A5A8VJ48
contig_1	Pyrodigal	gene	698652	698876	.	-	.	ID=GCA000560365_00657_gene;locus_tag=GCA000560365_00657
contig_1	Pyrodigal	CDS	698652	698876	.	-	0	ID=GCA000560365_00657;Name=DUF2922 domain-containing protein;locus_tag=GCA000560365_00657;product=DUF2922 domain-containing protein;Parent=GCA000560365_00657_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000169042.1,SO:0001217,UniParc:UPI00000547E0,UniRef:UniRef100_Q2G2V1,UniRef:UniRef50_Q2G2V1,UniRef:UniRef90_Q2G2V1
contig_1	Pyrodigal	gene	698893	699096	.	-	.	ID=GCA000560365_00658_gene;locus_tag=GCA000560365_00658
contig_1	Pyrodigal	CDS	698893	699096	.	-	0	ID=GCA000560365_00658;Name=DUF1659 domain-containing protein;locus_tag=GCA000560365_00658;product=DUF1659 domain-containing protein;Parent=GCA000560365_00658_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000036088.1,SO:0001217,UniParc:UPI00000547DF,UniRef:UniRef100_X5E477,UniRef:UniRef50_G5JM78,UniRef:UniRef90_A0A2P8WWM5
contig_1	Pyrodigal	gene	699255	699815	.	+	.	ID=GCA000560365_00659_gene;locus_tag=GCA000560365_00659;gene=xerD
contig_1	Pyrodigal	CDS	699255	699815	.	+	0	ID=GCA000560365_00659;Name=DNA integration/recombination/invertion protein;locus_tag=GCA000560365_00659;product=DNA integration/recombination/invertion protein;gene=xerD;Parent=GCA000560365_00659_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4974,COG:L,RefSeq:WP_001044915.1,SO:0001217,UniParc:UPI00000D770E,UniRef:UniRef100_W8U156,UniRef:UniRef50_W8U156,UniRef:UniRef90_W8U156
contig_1	Pyrodigal	gene	699834	702236	.	+	.	ID=GCA000560365_00660_gene;locus_tag=GCA000560365_00660;gene=mnhA2
contig_1	Pyrodigal	CDS	699834	702236	.	+	0	ID=GCA000560365_00660;Name=Na+/H+ antiporter Mnh2 subunit A;locus_tag=GCA000560365_00660;product=Na+/H+ antiporter Mnh2 subunit A;Dbxref=GO:0005886,GO:0006811,GO:0015297;gene=mnhA2;Parent=GCA000560365_00660_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000060776,COG:COG2111,COG:P,RefSeq:WP_000060776.1,SO:0001217,UniParc:UPI00000547DD,UniRef:UniRef100_Q2G2U8,UniRef:UniRef50_Q2G2U8,UniRef:UniRef90_Q2G2U8
contig_1	Pyrodigal	gene	702223	702648	.	+	.	ID=GCA000560365_00661_gene;locus_tag=GCA000560365_00661;gene=mnhB2
contig_1	Pyrodigal	CDS	702223	702648	.	+	0	ID=GCA000560365_00661;Name=Na+/H+ antiporter Mnh2 subunit B;locus_tag=GCA000560365_00661;product=Na+/H+ antiporter Mnh2 subunit B;Dbxref=GO:0005886,GO:0006811,GO:0015297;gene=mnhB2;Parent=GCA000560365_00661_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000661906,COG:COG2111,COG:P,RefSeq:WP_000661906.1,SO:0001217,UniParc:UPI00000547DC,UniRef:UniRef100_Q2G214,UniRef:UniRef50_Q2G214,UniRef:UniRef90_Q2G214
contig_1	Pyrodigal	gene	702645	702989	.	+	.	ID=GCA000560365_00662_gene;locus_tag=GCA000560365_00662;gene=mnhC2
contig_1	Pyrodigal	CDS	702645	702989	.	+	0	ID=GCA000560365_00662;Name=Na+/H+ antiporter Mnh2 subunit C;locus_tag=GCA000560365_00662;product=Na+/H+ antiporter Mnh2 subunit C;Dbxref=GO:0005886,GO:0006811,GO:0015297;gene=mnhC2;Parent=GCA000560365_00662_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001048985,COG:COG1006,COG:P,RefSeq:WP_001048985.1,SO:0001217,UniParc:UPI00000547DB,UniRef:UniRef100_Q2G213,UniRef:UniRef50_Q2G213,UniRef:UniRef90_Q2G213
contig_1	Pyrodigal	gene	702979	704475	.	+	.	ID=GCA000560365_00663_gene;locus_tag=GCA000560365_00663;gene=mnhD2
contig_1	Pyrodigal	CDS	702979	704475	.	+	0	ID=GCA000560365_00663;Name=Na+/H+ antiporter Mnh2 subunit D;locus_tag=GCA000560365_00663;product=Na+/H+ antiporter Mnh2 subunit D;Dbxref=GO:0005886,GO:0008137,GO:0015297,GO:0042773;gene=mnhD2;Parent=GCA000560365_00663_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000950548,COG:COG0651,COG:CP,RefSeq:WP_000950548.1,SO:0001217,UniParc:UPI00000D9CD4,UniRef:UniRef100_Q0Q2J7,UniRef:UniRef50_Q0Q2J7,UniRef:UniRef90_Q0Q2J7
contig_1	Pyrodigal	gene	704476	704958	.	+	.	ID=GCA000560365_00664_gene;locus_tag=GCA000560365_00664;gene=mnhE2
contig_1	Pyrodigal	CDS	704476	704958	.	+	0	ID=GCA000560365_00664;Name=Na+/H+ antiporter Mnh2 subunit E;locus_tag=GCA000560365_00664;product=Na+/H+ antiporter Mnh2 subunit E;Dbxref=GO:0005886,GO:0008324,GO:0015297;gene=mnhE2;Parent=GCA000560365_00664_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001071973,COG:COG1863,COG:P,RefSeq:WP_001071973.1,SO:0001217,UniParc:UPI00000547D9,UniRef:UniRef100_Q2G210,UniRef:UniRef50_Q2G210,UniRef:UniRef90_Q2G210
contig_1	Pyrodigal	gene	704955	705257	.	+	.	ID=GCA000560365_00665_gene;locus_tag=GCA000560365_00665;gene=mnhF2
contig_1	Pyrodigal	CDS	704955	705257	.	+	0	ID=GCA000560365_00665;Name=Na+/H+ antiporter Mnh2 subunit F;locus_tag=GCA000560365_00665;product=Na+/H+ antiporter Mnh2 subunit F;Dbxref=GO:0005886,GO:0015385;gene=mnhF2;Parent=GCA000560365_00665_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000616642,COG:COG2212,COG:P,RefSeq:WP_000616642.1,SO:0001217,UniParc:UPI00000547D5,UniRef:UniRef100_P0C948,UniRef:UniRef50_P0C948,UniRef:UniRef90_P0C948
contig_1	Pyrodigal	gene	705232	705669	.	+	.	ID=GCA000560365_00666_gene;locus_tag=GCA000560365_00666;gene=mnhG2
contig_1	Pyrodigal	CDS	705232	705669	.	+	0	ID=GCA000560365_00666;Name=Na+/H+ antiporter Mnh2 subunit G;locus_tag=GCA000560365_00666;product=Na+/H+ antiporter Mnh2 subunit G;Dbxref=GO:0005886,GO:0015385;gene=mnhG2;Parent=GCA000560365_00666_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001566533,COG:COG1320,COG:P,RefSeq:WP_000406611.1,SO:0001217,UniParc:UPI00000D9CD5,UniRef:UniRef100_Q2G2E1,UniRef:UniRef50_Q49VH5,UniRef:UniRef90_P0C947
contig_1	Pyrodigal	gene	706009	708051	.	+	.	ID=GCA000560365_00667_gene;locus_tag=GCA000560365_00667;gene=nhaP
contig_1	Pyrodigal	CDS	706009	708051	.	+	0	ID=GCA000560365_00667;Name=Cation/H+ exchanger transmembrane domain-containing protein;locus_tag=GCA000560365_00667;product=Cation/H+ exchanger transmembrane domain-containing protein;gene=nhaP;Parent=GCA000560365_00667_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0025,COG:P,RefSeq:WP_000402172.1,SO:0001217,UniParc:UPI00000D9CD6,UniRef:UniRef100_A0A7Z7W222,UniRef:UniRef50_Q2G2E0,UniRef:UniRef90_Q2G2E0
contig_1	Infernal	gene	708246	708685	.	-	.	ID=GCA000560365_00668_gene;locus_tag=GCA000560365_00668;gene=rsaC
contig_1	Infernal	ncRNA	708246	708685	6.7e-65	-	.	ID=GCA000560365_00668;Name=RNA Staph. aureus C;locus_tag=GCA000560365_00668;gene=rsaC;product=RNA Staph. aureus C;Dbxref=RFAM:RF01818;Parent=GCA000560365_00668_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01818
contig_1	Pyrodigal	gene	709211	710140	.	-	.	ID=GCA000560365_00669_gene;locus_tag=GCA000560365_00669;gene=mntC
contig_1	Pyrodigal	CDS	709211	710140	.	-	0	ID=GCA000560365_00669;Name=manganese ABC transporter substrate-binding lipoprotein MntC;locus_tag=GCA000560365_00669;product=manganese ABC transporter substrate-binding lipoprotein MntC;Dbxref=GO:0015410;gene=mntC;Parent=GCA000560365_00669_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0803,COG:P,RefSeq:WP_000737654.1,SO:0001217,UniParc:UPI000005228B,UniRef:UniRef100_A0A7Z7QX41,UniRef:UniRef50_S2YNP1,UniRef:UniRef90_A0A7U7PYB7;ec_number=7.2.2.5
contig_1	Pyrodigal	gene	710137	710973	.	-	.	ID=GCA000560365_00670_gene;locus_tag=GCA000560365_00670;gene=znuB
contig_1	Pyrodigal	CDS	710137	710973	.	-	0	ID=GCA000560365_00670;Name=Metal ABC transporter permease;locus_tag=GCA000560365_00670;product=Metal ABC transporter permease;gene=znuB;Parent=GCA000560365_00670_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1108,COG:P,RefSeq:WP_000889252.1,SO:0001217,UniParc:UPI00000547D1,UniRef:UniRef100_Q2G2D9,UniRef:UniRef50_S2XTU7,UniRef:UniRef90_A0A7U7EXG0
contig_1	Pyrodigal	gene	710967	711710	.	-	.	ID=GCA000560365_00671_gene;locus_tag=GCA000560365_00671;gene=znuC
contig_1	Pyrodigal	CDS	710967	711710	.	-	0	ID=GCA000560365_00671;Name=ABC transporter domain-containing protein;locus_tag=GCA000560365_00671;product=ABC transporter domain-containing protein;gene=znuC;Parent=GCA000560365_00671_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1121,COG:P,RefSeq:WP_000894464.1,SO:0001217,UniParc:UPI00000DCA56,UniRef:UniRef100_Q2G2L2,UniRef:UniRef50_A0A240BUN7,UniRef:UniRef90_Q2G2L2
contig_1	Pyrodigal	gene	711832	712476	.	+	.	ID=GCA000560365_00672_gene;locus_tag=GCA000560365_00672;gene=mntR
contig_1	Pyrodigal	CDS	711832	712476	.	+	0	ID=GCA000560365_00672;Name=Manganese transport regulator;locus_tag=GCA000560365_00672;product=Manganese transport regulator;gene=mntR;Parent=GCA000560365_00672_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1321,COG:K,RefSeq:WP_000954654.1,SO:0001217,UniParc:UPI00000547CF,UniRef:UniRef100_Q2G2L0,UniRef:UniRef50_Q5HRA0,UniRef:UniRef90_A0A2K4AED5
contig_1	Pyrodigal	gene	712556	713308	.	-	.	ID=GCA000560365_00673_gene;locus_tag=GCA000560365_00673
contig_1	Pyrodigal	CDS	712556	713308	.	-	0	ID=GCA000560365_00673;Name=M50 family metallopeptidase;locus_tag=GCA000560365_00673;product=M50 family metallopeptidase;Parent=GCA000560365_00673_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001108545.1,SO:0001217,UniParc:UPI00003B1491,UniRef:UniRef100_Q2G2K9,UniRef:UniRef50_Q2G2K9,UniRef:UniRef90_Q2G2K9
contig_1	Pyrodigal	gene	713544	714308	.	+	.	ID=GCA000560365_00674_gene;locus_tag=GCA000560365_00674;gene=tarA
contig_1	Pyrodigal	CDS	713544	714308	.	+	0	ID=GCA000560365_00674;Name=N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase TarA;locus_tag=GCA000560365_00674;product=N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase TarA;Dbxref=GO:0019350,GO:0047244,GO:0071555;gene=tarA;Parent=GCA000560365_00674_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1922,COG:M,RefSeq:WP_000215388.1,SO:0001217,UniParc:UPI0000052300,UniRef:UniRef100_Q2G2L3,UniRef:UniRef50_Q2G2L3,UniRef:UniRef90_Q2G2L3;ec_number=2.4.1.187
contig_1	Pyrodigal	gene	714369	715163	.	-	.	ID=GCA000560365_00675_gene;locus_tag=GCA000560365_00675;gene=tagH
contig_1	Pyrodigal	CDS	714369	715163	.	-	0	ID=GCA000560365_00675;Name=teichoic acids export ABC transporter ATP-binding subunit TagH;locus_tag=GCA000560365_00675;product=teichoic acids export ABC transporter ATP-binding subunit TagH;Dbxref=GO:0005524,GO:0005886,GO:0015438,GO:0016020,GO:0016887,GO:0140359;gene=tagH;Parent=GCA000560365_00675_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1134,COG:G,RefSeq:WP_001103232.1,SO:0001217,UniParc:UPI00000D9CD8,UniRef:UniRef100_Q2G2L1,UniRef:UniRef50_Q2G2L1,UniRef:UniRef90_Q2G2L1;ec_number=7.5.2.4
contig_1	Pyrodigal	gene	715510	716322	.	+	.	ID=GCA000560365_00676_gene;locus_tag=GCA000560365_00676;gene=tagG
contig_1	Pyrodigal	CDS	715510	716322	.	+	0	ID=GCA000560365_00676;Name=teichoic acids export ABC transporter permease subunit TagG;locus_tag=GCA000560365_00676;product=teichoic acids export ABC transporter permease subunit TagG;gene=tagG;Parent=GCA000560365_00676_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001273058,BlastRules:WP_003227928,COG:COG1682,COG:G,KEGG:K09692,RefSeq:WP_001273058.1,SO:0001217,UniParc:UPI00003D0D87,UniRef:UniRef100_Q2G2X5,UniRef:UniRef50_A0A7U7EU92,UniRef:UniRef90_A0A7U7EU92
contig_1	Pyrodigal	gene	716421	717524	.	+	.	ID=GCA000560365_00677_gene;locus_tag=GCA000560365_00677;gene=tarB
contig_1	Pyrodigal	CDS	716421	717524	.	+	0	ID=GCA000560365_00677;Name=teichoic acid glycerol-phosphate primase TarB;locus_tag=GCA000560365_00677;product=teichoic acid glycerol-phosphate primase TarB;Dbxref=GO:0005886,GO:0019350,GO:0047355,GO:0071555;gene=tarB;Parent=GCA000560365_00677_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1887,COG:MI,RefSeq:WP_001101603.1,SO:0001217,UniParc:UPI00000547CA,UniRef:UniRef100_Q2G2X4,UniRef:UniRef50_Q2G2X4,UniRef:UniRef90_Q2G2X4;ec_number=2.7.8.44
contig_1	Pyrodigal	gene	717521	718582	.	+	.	ID=GCA000560365_00678_gene;locus_tag=GCA000560365_00678;gene=tagX
contig_1	Pyrodigal	CDS	717521	718582	.	+	0	ID=GCA000560365_00678;Name=Putative glycosyltransferase TagX;locus_tag=GCA000560365_00678;product=Putative glycosyltransferase TagX;Dbxref=GO:0008360,GO:0016757,GO:0019350,GO:0071555;gene=tagX;Parent=GCA000560365_00678_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1216,COG:G,RefSeq:WP_001212876.1,SO:0001217,UniParc:UPI0000696BD3,UniRef:UniRef100_A0A1S5ZS02,UniRef:UniRef50_O05154,UniRef:UniRef90_O05154;ec_number=2.4.-.-
contig_1	Pyrodigal	gene	718645	719043	.	+	.	ID=GCA000560365_00679_gene;locus_tag=GCA000560365_00679;gene=tagD
contig_1	Pyrodigal	CDS	718645	719043	.	+	0	ID=GCA000560365_00679;Name=glycerol-3-phosphate cytidylyltransferase;locus_tag=GCA000560365_00679;product=glycerol-3-phosphate cytidylyltransferase;Dbxref=GO:0005737,GO:0019350,GO:0046872,GO:0047348,GO:0071555;gene=tagD;Parent=GCA000560365_00679_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0615,COG:M,RefSeq:WP_000832260.1,SO:0001217,UniParc:UPI00000547C8,UniRef:UniRef100_Q2G2X2,UniRef:UniRef50_Q2G2X2,UniRef:UniRef90_Q2G2X2;ec_number=2.7.7.39
contig_1	Pyrodigal	gene	719160	720455	.	-	.	ID=GCA000560365_00680_gene;locus_tag=GCA000560365_00680;gene=pbp4
contig_1	Pyrodigal	CDS	719160	720455	.	-	0	ID=GCA000560365_00680;Name=penicillin-binding protein PBP4;locus_tag=GCA000560365_00680;product=penicillin-binding protein PBP4;gene=pbp4;Parent=GCA000560365_00680_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1686,COG:M,RefSeq:WP_000793070.1,SO:0001217,UniParc:UPI00004B5B49,UniRef:UniRef100_Q2G2X6,UniRef:UniRef50_A0A218M1Q9,UniRef:UniRef90_A0A218M1Q9
contig_1	Pyrodigal	gene	720876	722603	.	+	.	ID=GCA000560365_00681_gene;locus_tag=GCA000560365_00681;gene=mdlB
contig_1	Pyrodigal	CDS	720876	722603	.	+	0	ID=GCA000560365_00681;Name=ABC transporter ATP-binding protein;locus_tag=GCA000560365_00681;product=ABC transporter ATP-binding protein;gene=mdlB;Parent=GCA000560365_00681_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1132,COG:V,RefSeq:WP_000817954.1,SO:0001217,UniParc:UPI00000547C5,UniRef:UniRef100_Q2G2E5,UniRef:UniRef50_Q2G2E5,UniRef:UniRef90_Q2G2E5
contig_1	Pyrodigal	gene	722962	724191	.	+	.	ID=GCA000560365_00682_gene;locus_tag=GCA000560365_00682;gene=nupC
contig_1	Pyrodigal	CDS	722962	724191	.	+	0	ID=GCA000560365_00682;Name=NupC/NupG family nucleoside CNT transporter;locus_tag=GCA000560365_00682;product=NupC/NupG family nucleoside CNT transporter;gene=nupC;Parent=GCA000560365_00682_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1972,COG:F,KEGG:K16323,RefSeq:WP_000479279.1,SO:0001217,UniParc:UPI00000549B9,UniRef:UniRef100_Q2G2E4,UniRef:UniRef50_Q2G2E4,UniRef:UniRef90_Q2G2E4
contig_1	Infernal	gene	724341	724517	.	-	.	ID=GCA000560365_00683_gene;locus_tag=GCA000560365_00683;gene=rsaD
contig_1	Infernal	ncRNA	724341	724517	7.6e-29	-	.	ID=GCA000560365_00683;Name=RNA Staph. aureus D;locus_tag=GCA000560365_00683;gene=rsaD;product=RNA Staph. aureus D;Dbxref=RFAM:RF01819;Parent=GCA000560365_00683_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01819
contig_1	Pyrodigal	gene	724716	725549	.	+	.	ID=GCA000560365_00684_gene;locus_tag=GCA000560365_00684;gene=yitT
contig_1	Pyrodigal	CDS	724716	725549	.	+	0	ID=GCA000560365_00684;Name=DUF2179 domain-containing protein;locus_tag=GCA000560365_00684;product=DUF2179 domain-containing protein;gene=yitT;Parent=GCA000560365_00684_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1284,COG:S,RefSeq:WP_001044662.1,SO:0001217,UniParc:UPI00003B1A72,UniRef:UniRef100_Q2G2E2,UniRef:UniRef50_Q2G2E2,UniRef:UniRef90_Q2G2E2
contig_1	Pyrodigal	gene	725831	726628	.	+	.	ID=GCA000560365_00685_gene;locus_tag=GCA000560365_00685;gene=fepC
contig_1	Pyrodigal	CDS	725831	726628	.	+	0	ID=GCA000560365_00685;Name=ABC transporter ATP-binding protein;locus_tag=GCA000560365_00685;product=ABC transporter ATP-binding protein;gene=fepC;Parent=GCA000560365_00685_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1120,COG:PH,RefSeq:WP_001080809.1,SO:0001217,UniParc:UPI00000549B6,UniRef:UniRef100_Q2G1Z3,UniRef:UniRef50_R2PWZ5,UniRef:UniRef90_A0A2K4AE83
contig_1	Pyrodigal	gene	726664	727668	.	+	.	ID=GCA000560365_00686_gene;locus_tag=GCA000560365_00686;gene=fepD
contig_1	Pyrodigal	CDS	726664	727668	.	+	0	ID=GCA000560365_00686;Name=Ferrichrome ABC transporter (Permease);locus_tag=GCA000560365_00686;product=Ferrichrome ABC transporter (Permease);gene=fepD;Parent=GCA000560365_00686_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0609,COG:P,RefSeq:WP_000184741.1,SO:0001217,UniParc:UPI00000CAC61,UniRef:UniRef100_Q2G1Z2,UniRef:UniRef50_B9E9G3,UniRef:UniRef90_A0A7U7JT50
contig_1	Pyrodigal	gene	727665	728681	.	+	.	ID=GCA000560365_00687_gene;locus_tag=GCA000560365_00687;gene=fepD
contig_1	Pyrodigal	CDS	727665	728681	.	+	0	ID=GCA000560365_00687;Name=Ferrichrome ABC transporter (Permease);locus_tag=GCA000560365_00687;product=Ferrichrome ABC transporter (Permease);gene=fepD;Parent=GCA000560365_00687_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0609,COG:P,RefSeq:WP_000625882.1,SO:0001217,UniParc:UPI0000696BD4,UniRef:UniRef100_A0A1S6DUE2,UniRef:UniRef50_B9DKA5,UniRef:UniRef90_A0A0U1MFB2
contig_1	Pyrodigal	gene	728915	729883	.	+	.	ID=GCA000560365_00688_gene;locus_tag=GCA000560365_00688;gene=dhaK
contig_1	Pyrodigal	CDS	728915	729883	.	+	0	ID=GCA000560365_00688;Name=dihydroxyacetone kinase subunit DhaK;locus_tag=GCA000560365_00688;product=dihydroxyacetone kinase subunit DhaK;Dbxref=GO:0004371,GO:0006071;gene=dhaK;Parent=GCA000560365_00688_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2376,COG:G,RefSeq:WP_000976269.1,SO:0001217,UniParc:UPI00000549B2,UniRef:UniRef100_Q2G1Z0,UniRef:UniRef50_A0A0D6XPW7,UniRef:UniRef90_A0A380E3E7;ec_number=2.7.1.121
contig_1	Pyrodigal	gene	729925	730509	.	+	.	ID=GCA000560365_00689_gene;locus_tag=GCA000560365_00689;gene=dhaL
contig_1	Pyrodigal	CDS	729925	730509	.	+	0	ID=GCA000560365_00689;Name=dihydroxyacetone kinase subunit DhaL;locus_tag=GCA000560365_00689;product=dihydroxyacetone kinase subunit DhaL;Dbxref=GO:0006071,GO:0047324;gene=dhaL;Parent=GCA000560365_00689_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2376,COG:G,RefSeq:WP_000867203.1,SO:0001217,UniParc:UPI00004B5B4B,UniRef:UniRef100_Q2G0E9,UniRef:UniRef50_A0A380G5G0,UniRef:UniRef90_A0AAE8PB82;ec_number=2.7.1.121
contig_1	Pyrodigal	gene	730502	730864	.	+	.	ID=GCA000560365_00690_gene;locus_tag=GCA000560365_00690;gene=dhaM
contig_1	Pyrodigal	CDS	730502	730864	.	+	0	ID=GCA000560365_00690;Name=phosphoenolpyruvate--glycerone phosphotransferase;locus_tag=GCA000560365_00690;product=phosphoenolpyruvate--glycerone phosphotransferase;gene=dhaM;Parent=GCA000560365_00690_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3412,COG:T,RefSeq:WP_001124167.1,SO:0001217,UniParc:UPI00000D781C,UniRef:UniRef100_Q2G0E8,UniRef:UniRef50_A0A2T4MIK7,UniRef:UniRef90_A0A0U1MGK2
contig_1	Pyrodigal	gene	730980	731477	.	+	.	ID=GCA000560365_00691_gene;locus_tag=GCA000560365_00691
contig_1	Pyrodigal	CDS	730980	731477	.	+	0	ID=GCA000560365_00691;Name=Immunity protein 30 domain-containing protein;locus_tag=GCA000560365_00691;product=Immunity protein 30 domain-containing protein;Parent=GCA000560365_00691_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001164085.1,SO:0001217,UniParc:UPI00000549AF,UniRef:UniRef100_Q2G0E7,UniRef:UniRef50_S2YNQ8,UniRef:UniRef90_A0A9X5XNP2
contig_1	Pyrodigal	gene	731933	733000	.	+	.	ID=GCA000560365_00692_gene;locus_tag=GCA000560365_00692;gene=ykvI
contig_1	Pyrodigal	CDS	731933	733000	.	+	0	ID=GCA000560365_00692;Name=Branched-chain amino acid transport system II carrier protein;locus_tag=GCA000560365_00692;product=Branched-chain amino acid transport system II carrier protein;gene=ykvI;Parent=GCA000560365_00692_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3949,COG:S,RefSeq:WP_000980137.1,SO:0001217,UniParc:UPI00000549AE,UniRef:UniRef100_Q2G0E6,UniRef:UniRef50_K9AMJ6,UniRef:UniRef90_Q2G0E6
contig_1	Pyrodigal	gene	733151	734194	.	+	.	ID=GCA000560365_00693_gene;locus_tag=GCA000560365_00693;gene=aes
contig_1	Pyrodigal	CDS	733151	734194	.	+	0	ID=GCA000560365_00693;Name=Alpha/beta hydrolase fold-3 domain-containing protein;locus_tag=GCA000560365_00693;product=Alpha/beta hydrolase fold-3 domain-containing protein;gene=aes;Parent=GCA000560365_00693_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0657,COG:I,RefSeq:WP_001030771.1,SO:0001217,UniParc:UPI00000549AD,UniRef:UniRef100_Q2G0E5,UniRef:UniRef50_A0A240BV45,UniRef:UniRef90_Q2G0E5
contig_1	Pyrodigal	gene	734523	734951	.	+	.	ID=GCA000560365_00694_gene;locus_tag=GCA000560365_00694
contig_1	Pyrodigal	CDS	734523	734951	.	+	0	ID=GCA000560365_00694;Name=Cytosolic protein;locus_tag=GCA000560365_00694;product=Cytosolic protein;Parent=GCA000560365_00694_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000198504.1,SO:0001217,UniParc:UPI00000549AC,UniRef:UniRef100_Q2G0E3,UniRef:UniRef50_A0A7U7JT75,UniRef:UniRef90_Q2G0E3
contig_1	Pyrodigal	gene	735160	735666	.	-	.	ID=GCA000560365_00695_gene;locus_tag=GCA000560365_00695;gene=rimL
contig_1	Pyrodigal	CDS	735160	735666	.	-	0	ID=GCA000560365_00695;Name=N-acetyltransferase domain-containing protein;locus_tag=GCA000560365_00695;product=N-acetyltransferase domain-containing protein;gene=rimL;Parent=GCA000560365_00695_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1670,COG:JO,RefSeq:WP_000940134.1,SO:0001217,UniParc:UPI00000549AB,UniRef:UniRef100_Q2G0E2,UniRef:UniRef50_Q2G0E2,UniRef:UniRef90_Q2G0E2
contig_1	Pyrodigal	gene	735779	736702	.	+	.	ID=GCA000560365_00696_gene;locus_tag=GCA000560365_00696;gene=graX
contig_1	Pyrodigal	CDS	735779	736702	.	+	0	ID=GCA000560365_00696;Name=auxiliary protein GraX/ApsX;locus_tag=GCA000560365_00696;product=auxiliary protein GraX/ApsX;gene=graX;Parent=GCA000560365_00696_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000802946,BlastRules:WP_001832033,COG:COG0451,COG:M,RefSeq:WP_000802946.1,SO:0001217,UniParc:UPI00000549AA,UniRef:UniRef100_Q2G0E1,UniRef:UniRef50_Q2G0E1,UniRef:UniRef90_Q2G0E1
contig_1	Pyrodigal	gene	736718	737392	.	+	.	ID=GCA000560365_00697_gene;locus_tag=GCA000560365_00697;gene=graR
contig_1	Pyrodigal	CDS	736718	737392	.	+	0	ID=GCA000560365_00697;Name=response regulator transcription factor GraR/ApsR;locus_tag=GCA000560365_00697;product=response regulator transcription factor GraR/ApsR;Dbxref=GO:0000156,GO:0000976,GO:0005829,GO:0006355,GO:0032993,GO:0046677;gene=graR;Parent=GCA000560365_00697_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001166505,BlastRules:WP_001832046,COG:COG0745,COG:TK,KEGG:K19078,RefSeq:WP_001166505.1,SO:0001217,UniParc:UPI0000696BD5,UniRef:UniRef100_Q2G0E0,UniRef:UniRef50_Q2G0E0,UniRef:UniRef90_Q2G0E0
contig_1	Pyrodigal	gene	737385	738425	.	+	.	ID=GCA000560365_00698_gene;locus_tag=GCA000560365_00698;gene=graS
contig_1	Pyrodigal	CDS	737385	738425	.	+	0	ID=GCA000560365_00698;Name=histidine kinase GraS/ApsS;locus_tag=GCA000560365_00698;product=histidine kinase GraS/ApsS;Dbxref=GO:0000155,GO:0004721,GO:0005524,GO:0005886,GO:0016036,GO:0046677;gene=graS;Parent=GCA000560365_00698_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001061252,BlastRules:WP_002468453,COG:COG0642,COG:T,RefSeq:WP_001061252.1,SO:0001217,UniParc:UPI00000549A6,UniRef:UniRef100_Q2G0D9,UniRef:UniRef50_Q8NXR5,UniRef:UniRef90_Q8NXR5;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	738569	739330	.	+	.	ID=GCA000560365_00699_gene;locus_tag=GCA000560365_00699;gene=vraF
contig_1	Pyrodigal	CDS	738569	739330	.	+	0	ID=GCA000560365_00699;Name=ABC transporter ATP-binding protein VraF;locus_tag=GCA000560365_00699;product=ABC transporter ATP-binding protein VraF;gene=vraF;Parent=GCA000560365_00699_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001637630,BlastRules:WP_020363729,COG:COG1136,COG:M,KEGG:K19079,RefSeq:WP_000985996.1,SO:0001217,UniParc:UPI00000D77ED,UniRef:UniRef100_Q2G0D8,UniRef:UniRef50_O34697,UniRef:UniRef90_Q2G0D8
contig_1	Pyrodigal	gene	739320	741209	.	+	.	ID=GCA000560365_00700_gene;locus_tag=GCA000560365_00700;gene=vraG
contig_1	Pyrodigal	CDS	739320	741209	.	+	0	ID=GCA000560365_00700;Name=ABC transporter permease VraG;locus_tag=GCA000560365_00700;product=ABC transporter permease VraG;gene=vraG;Parent=GCA000560365_00700_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000143623,BlastRules:WP_002457535,KEGG:K19080,RefSeq:WP_000143623.1,SO:0001217,UniParc:UPI00004B5B4D,UniRef:UniRef100_Q2G0D7,UniRef:UniRef50_Q4L484,UniRef:UniRef90_A0A0H3JK48
contig_1	Pyrodigal	gene	741934	742551	.	+	.	ID=GCA000560365_00701_gene;locus_tag=GCA000560365_00701;gene=ykaA
contig_1	Pyrodigal	CDS	741934	742551	.	+	0	ID=GCA000560365_00701;Name=DUF47 domain-containing protein;locus_tag=GCA000560365_00701;product=DUF47 domain-containing protein;gene=ykaA;Parent=GCA000560365_00701_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1392,COG:P,RefSeq:WP_000491755.1,SO:0001217,UniParc:UPI00000549A3,UniRef:UniRef100_Q2G0D6,UniRef:UniRef50_A0A919WW74,UniRef:UniRef90_Q2G0D6
contig_1	Pyrodigal	gene	742567	743574	.	+	.	ID=GCA000560365_00702_gene;locus_tag=GCA000560365_00702;gene=pitA
contig_1	Pyrodigal	CDS	742567	743574	.	+	0	ID=GCA000560365_00702;Name=Inorganic phosphate transporter;locus_tag=GCA000560365_00702;product=Inorganic phosphate transporter;gene=pitA;Parent=GCA000560365_00702_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0306,COG:P,KEGG:K03306,RefSeq:WP_000120368.1,SO:0001217,UniParc:UPI00000549A2,UniRef:UniRef100_Q2G0D5,UniRef:UniRef50_Q2G0D5,UniRef:UniRef90_Q2G0D5
contig_1	Pyrodigal	gene	744162	744959	.	-	.	ID=GCA000560365_00703_gene;locus_tag=GCA000560365_00703
contig_1	Pyrodigal	CDS	744162	744959	.	-	0	ID=GCA000560365_00703;Name=putative autolysin SsaALP;locus_tag=GCA000560365_00703;product=putative autolysin SsaALP;Dbxref=GO:0008745,GO:0008932,GO:0031640,GO:0042742,GO:0071555;Parent=GCA000560365_00703_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3942,COG:M,RefSeq:WP_000731644.1,SO:0001217,UniParc:UPI000005226B,UniRef:UniRef100_Q2G0D4,UniRef:UniRef50_Q2G0D4,UniRef:UniRef90_Q2G0D4;ec_number=3.5.1.28
contig_1	Pyrodigal	gene	745320	745964	.	+	.	ID=GCA000560365_00704_gene;locus_tag=GCA000560365_00704;gene=ybhL
contig_1	Pyrodigal	CDS	745320	745964	.	+	0	ID=GCA000560365_00704;Name=Transporter;locus_tag=GCA000560365_00704;product=Transporter;gene=ybhL;Parent=GCA000560365_00704_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0670,COG:P,RefSeq:WP_000081602.1,SO:0001217,UniParc:UPI00000D76B5,UniRef:UniRef100_Q2G0D3,UniRef:UniRef50_Q2G0D3,UniRef:UniRef90_Q2G0D3
contig_1	Pyrodigal	gene	746661	748640	.	+	.	ID=GCA000560365_00705_gene;locus_tag=GCA000560365_00705;gene=araC
contig_1	Pyrodigal	CDS	746661	748640	.	+	0	ID=GCA000560365_00705;Name=HTH araC/xylS-type domain-containing protein;locus_tag=GCA000560365_00705;product=HTH araC/xylS-type domain-containing protein;gene=araC;Parent=GCA000560365_00705_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2207,COG:K,SO:0001217,UniParc:UPI0000696BD6,UniRef:UniRef100_A0A1S6BNL1,UniRef:UniRef50_Q2G0D2,UniRef:UniRef90_Q2G0D2
contig_1	Pyrodigal	gene	748637	748810	.	+	.	ID=GCA000560365_00706_gene;locus_tag=GCA000560365_00706
contig_1	Pyrodigal	CDS	748637	748810	.	+	0	ID=GCA000560365_00706;Name=hypothetical protein;locus_tag=GCA000560365_00706;product=hypothetical protein;Parent=GCA000560365_00706_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_UPI00201FC901,UniRef:UniRef90_UPI00201FC901
contig_1	Pyrodigal	gene	748890	749315	.	+	.	ID=GCA000560365_00707_gene;locus_tag=GCA000560365_00707;gene=sarX
contig_1	Pyrodigal	CDS	748890	749315	.	+	0	ID=GCA000560365_00707;Name=HTH-type transcriptional regulator SarX;locus_tag=GCA000560365_00707;product=HTH-type transcriptional regulator SarX;Dbxref=GO:0003677,GO:0005737,GO:0006355;gene=sarX;Parent=GCA000560365_00707_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000818255.1,SO:0001217,UniParc:UPI00004B5B4E,UniRef:UniRef100_A0A0D6G3K2,UniRef:UniRef50_Q2G0D1,UniRef:UniRef90_Q2G0D1
contig_1	Pyrodigal	gene	749505	750221	.	+	.	ID=GCA000560365_00708_gene;locus_tag=GCA000560365_00708;gene=tACO1
contig_1	Pyrodigal	CDS	749505	750221	.	+	0	ID=GCA000560365_00708;Name=YebC/PmpR family DNA-binding transcriptional regulator;locus_tag=GCA000560365_00708;product=YebC/PmpR family DNA-binding transcriptional regulator;Dbxref=GO:0003677,GO:0005829,GO:0006355;gene=tACO1;Parent=GCA000560365_00708_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0217,COG:KJ,RefSeq:WP_000532966.1,SO:0001217,UniParc:UPI0000054971,UniRef:UniRef100_Q2G0D0,UniRef:UniRef50_P0A8A2,UniRef:UniRef90_Q2G0D0
contig_1	Pyrodigal	gene	750221	750694	.	+	.	ID=GCA000560365_00709_gene;locus_tag=GCA000560365_00709;gene=cFF1
contig_1	Pyrodigal	CDS	750221	750694	.	+	0	ID=GCA000560365_00709;Name=DUF985 domain-containing protein;locus_tag=GCA000560365_00709;product=DUF985 domain-containing protein;gene=cFF1;Parent=GCA000560365_00709_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3542,COG:R,KEGG:K09705,RefSeq:WP_000833483.1,SO:0001217,UniParc:UPI0000054969,UniRef:UniRef100_Q2G0C9,UniRef:UniRef50_Q2G0C9,UniRef:UniRef90_Q2G0C9
contig_1	Pyrodigal	gene	751047	751691	.	+	.	ID=GCA000560365_00710_gene;locus_tag=GCA000560365_00710
contig_1	Pyrodigal	CDS	751047	751691	.	+	0	ID=GCA000560365_00710;Name=DUF402 domain-containing protein;locus_tag=GCA000560365_00710;product=DUF402 domain-containing protein;Parent=GCA000560365_00710_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2306,COG:R,KEGG:K09145,RefSeq:WP_000865624.1,SO:0001217,UniParc:UPI00000D77F5,UniRef:UniRef100_Q2G0C7,UniRef:UniRef50_Q49VL4,UniRef:UniRef90_A0A7U7JT79
contig_1	Pyrodigal	gene	751807	752673	.	+	.	ID=GCA000560365_00711_gene;locus_tag=GCA000560365_00711;gene=lysR
contig_1	Pyrodigal	CDS	751807	752673	.	+	0	ID=GCA000560365_00711;Name=HTH lysR-type domain-containing protein;locus_tag=GCA000560365_00711;product=HTH lysR-type domain-containing protein;gene=lysR;Parent=GCA000560365_00711_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0583,COG:K,RefSeq:WP_000687411.1,SO:0001217,UniParc:UPI00004B5B4F,UniRef:UniRef100_Q2G0C6,UniRef:UniRef50_Q2G0C6,UniRef:UniRef90_Q2G0C6
contig_1	Bakta	gap	752875	752974	.	.	.	ID=KMHODOBJJH_2860;Name=gap (100 bp);product=gap (100 bp)
contig_1	Pyrodigal	gene	753091	754311	.	+	.	ID=GCA000560365_00712_gene;locus_tag=GCA000560365_00712
contig_1	Pyrodigal	CDS	753091	754311	.	+	0	ID=GCA000560365_00712;Name=Major facilitator superfamily protein superfamily;locus_tag=GCA000560365_00712;product=Major facilitator superfamily protein superfamily;Parent=GCA000560365_00712_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03291,RefSeq:WP_000367064.1,SO:0001217,UniParc:UPI000005493E,UniRef:UniRef100_Q2G0C4,UniRef:UniRef50_Q2G0C4,UniRef:UniRef90_Q2G0C4
contig_1	Pyrodigal	gene	754308	754796	.	+	.	ID=GCA000560365_00713_gene;locus_tag=GCA000560365_00713;gene=yqgC
contig_1	Pyrodigal	CDS	754308	754796	.	+	0	ID=GCA000560365_00713;Name=DUF456 domain-containing protein;locus_tag=GCA000560365_00713;product=DUF456 domain-containing protein;gene=yqgC;Parent=GCA000560365_00713_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2839,COG:S,KEGG:K03291,RefSeq:WP_000152582.1,SO:0001217,UniParc:UPI0000054935,UniRef:UniRef100_Q2G0C3,UniRef:UniRef50_Q2G0C4,UniRef:UniRef90_Q2G0C3
contig_1	Pyrodigal	gene	754895	755584	.	-	.	ID=GCA000560365_00714_gene;locus_tag=GCA000560365_00714
contig_1	Pyrodigal	CDS	754895	755584	.	-	0	ID=GCA000560365_00714;Name=DUF1129 domain-containing protein;locus_tag=GCA000560365_00714;product=DUF1129 domain-containing protein;Parent=GCA000560365_00714_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4858,COG:S,RefSeq:WP_000842860.1,SO:0001217,UniParc:UPI0000054922,UniRef:UniRef100_Q2G0C2,UniRef:UniRef50_Q2G0C2,UniRef:UniRef90_Q2G0C2
contig_1	Pyrodigal	gene	755711	756154	.	+	.	ID=GCA000560365_00715_gene;locus_tag=GCA000560365_00715
contig_1	Pyrodigal	CDS	755711	756154	.	+	0	ID=GCA000560365_00715;Name=N-acetyltransferase domain-containing protein;locus_tag=GCA000560365_00715;product=N-acetyltransferase domain-containing protein;Parent=GCA000560365_00715_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001259678.1,SO:0001217,UniParc:UPI00000D9CE7,UniRef:UniRef100_Q2G0C1,UniRef:UniRef50_Q2G0C1,UniRef:UniRef90_Q2G0C1
contig_1	Pyrodigal	gene	756221	756616	.	+	.	ID=GCA000560365_00716_gene;locus_tag=GCA000560365_00716
contig_1	Pyrodigal	CDS	756221	756616	.	+	0	ID=GCA000560365_00716;Name=SA0632 family lipoprotein;locus_tag=GCA000560365_00716;product=SA0632 family lipoprotein;Parent=GCA000560365_00716_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000733431.1,SO:0001217,UniParc:UPI0000054916,UniRef:UniRef100_Q2G0C0,UniRef:UniRef50_G5JIS8,UniRef:UniRef90_A0A0U1MGS1
contig_1	Pyrodigal	gene	756754	757053	.	+	.	ID=GCA000560365_00717_gene;locus_tag=GCA000560365_00717
contig_1	Pyrodigal	CDS	756754	757053	.	+	0	ID=GCA000560365_00717;Name=Phage protein;locus_tag=GCA000560365_00717;product=Phage protein;Parent=GCA000560365_00717_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000545115.1,SO:0001217,UniParc:UPI000005490B,UniRef:UniRef100_Q2G0B9,UniRef:UniRef50_A0A240BWH3,UniRef:UniRef90_Q2G0B9
contig_1	Pyrodigal	gene	757133	757675	.	+	.	ID=GCA000560365_00718_gene;locus_tag=GCA000560365_00718;gene=rimL
contig_1	Pyrodigal	CDS	757133	757675	.	+	0	ID=GCA000560365_00718;Name=Acetyltransferase%2C GNAT family;locus_tag=GCA000560365_00718;product=Acetyltransferase%2C GNAT family;gene=rimL;Parent=GCA000560365_00718_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1670,COG:JO,RefSeq:WP_000638613.1,SO:0001217,UniParc:UPI0000054900,UniRef:UniRef100_A0AA43V2W6,UniRef:UniRef50_A0A0U1MFJ7,UniRef:UniRef90_A0A0U1MFJ7
contig_1	Pyrodigal	gene	757771	758337	.	-	.	ID=GCA000560365_00719_gene;locus_tag=GCA000560365_00719;gene=ppnN
contig_1	Pyrodigal	CDS	757771	758337	.	-	0	ID=GCA000560365_00719;Name=Cytokinin riboside 5'-monophosphate phosphoribohydrolase;locus_tag=GCA000560365_00719;product=Cytokinin riboside 5'-monophosphate phosphoribohydrolase;gene=ppnN;Parent=GCA000560365_00719_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1611,COG:F,KEGG:K22522,RefSeq:WP_000820892.1,SO:0001217,UniParc:UPI00000548EB,UniRef:UniRef100_Q2G0B7,UniRef:UniRef50_A0A9X5XNB6,UniRef:UniRef90_A0A0U1MFK8;ec_number=3.2.2.-
contig_1	Pyrodigal	gene	758339	758797	.	-	.	ID=GCA000560365_00720_gene;locus_tag=GCA000560365_00720;gene=yaiI
contig_1	Pyrodigal	CDS	758339	758797	.	-	0	ID=GCA000560365_00720;Name=YaiI/YqxD family protein;locus_tag=GCA000560365_00720;product=YaiI/YqxD family protein;gene=yaiI;Parent=GCA000560365_00720_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1671,COG:S,KEGG:K09768,RefSeq:WP_000148828.1,SO:0001217,UniParc:UPI0000139B6F,UniRef:UniRef100_Q2G0B6,UniRef:UniRef50_Q2G0B6,UniRef:UniRef90_Q2G0B6
contig_1	Pyrodigal	gene	758800	759483	.	-	.	ID=GCA000560365_00721_gene;locus_tag=GCA000560365_00721
contig_1	Pyrodigal	CDS	758800	759483	.	-	0	ID=GCA000560365_00721;Name=hypothetical protein;locus_tag=GCA000560365_00721;product=hypothetical protein;Parent=GCA000560365_00721_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000358498.1,SO:0001217,UniParc:UPI00000548D6,UniRef:UniRef100_Q2G0B5,UniRef:UniRef50_A0A0E1X7T8,UniRef:UniRef90_A0A0E1X7T8
contig_1	Pyrodigal	gene	759655	760530	.	-	.	ID=GCA000560365_00722_gene;locus_tag=GCA000560365_00722;gene=uppP
contig_1	Pyrodigal	CDS	759655	760530	.	-	0	ID=GCA000560365_00722;Name=undecaprenyl-diphosphate phosphatase;locus_tag=GCA000560365_00722;product=undecaprenyl-diphosphate phosphatase;Dbxref=GO:0005886,GO:0008360,GO:0009252,GO:0016020,GO:0016311,GO:0046677,GO:0050380,GO:0071555;gene=uppP;Parent=GCA000560365_00722_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1968,COG:I,RefSeq:WP_000469890.1,SO:0001217,UniParc:UPI0000696BD7,UniRef:UniRef100_Q2G0B4,UniRef:UniRef50_P94507,UniRef:UniRef90_Q9KIN5;ec_number=3.6.1.27
contig_1	Pyrodigal	gene	760743	762374	.	+	.	ID=GCA000560365_00723_gene;locus_tag=GCA000560365_00723;gene=cydD
contig_1	Pyrodigal	CDS	760743	762374	.	+	0	ID=GCA000560365_00723;Name=ABC transporter ATP-binding protein/permease;locus_tag=GCA000560365_00723;product=ABC transporter ATP-binding protein/permease;gene=cydD;Parent=GCA000560365_00723_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CO,COG:COG4988,RefSeq:WP_000737143.1,SO:0001217,UniParc:UPI00004B5B51,UniRef:UniRef100_Q2G0B3,UniRef:UniRef50_A0A0H2VEV6,UniRef:UniRef90_Q2G0B3
contig_1	Pyrodigal	gene	762371	764044	.	+	.	ID=GCA000560365_00724_gene;locus_tag=GCA000560365_00724;gene=cydC
contig_1	Pyrodigal	CDS	762371	764044	.	+	0	ID=GCA000560365_00724;Name=Amino acid ABC transporter ATP-binding/permease protein;locus_tag=GCA000560365_00724;product=Amino acid ABC transporter ATP-binding/permease protein;gene=cydC;Parent=GCA000560365_00724_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CO,COG:COG4987,RefSeq:WP_000857602.1,SO:0001217,UniParc:UPI00000548C2,UniRef:UniRef100_Q2G0B2,UniRef:UniRef50_A0A4U9TIQ0,UniRef:UniRef90_Q2G0B2
contig_1	Pyrodigal	gene	764171	764614	.	-	.	ID=GCA000560365_00725_gene;locus_tag=GCA000560365_00725;gene=mgrA
contig_1	Pyrodigal	CDS	764171	764614	.	-	0	ID=GCA000560365_00725;Name=HTH-type transcriptional regulator MgrA;locus_tag=GCA000560365_00725;product=HTH-type transcriptional regulator MgrA;Dbxref=GO:0003677,GO:0003700,GO:0005737,GO:0006950;gene=mgrA;Parent=GCA000560365_00725_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001283444,COG:COG1846,COG:K,KEGG:K18906,RefSeq:WP_001283444.1,SO:0001217,UniParc:UPI00000548AE,UniRef:UniRef100_Q2G0B1,UniRef:UniRef50_Q2G0B1,UniRef:UniRef90_Q2G0B1
contig_1	Pyrodigal	gene	764841	765767	.	+	.	ID=GCA000560365_00726_gene;locus_tag=GCA000560365_00726;gene=yejR
contig_1	Pyrodigal	CDS	764841	765767	.	+	0	ID=GCA000560365_00726;Name=CobW C-terminal domain-containing protein;locus_tag=GCA000560365_00726;product=CobW C-terminal domain-containing protein;gene=yejR;Parent=GCA000560365_00726_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0523,COG:R,RefSeq:WP_000794407.1,SO:0001217,UniParc:UPI00000548AD,UniRef:UniRef100_Q2G0B0,UniRef:UniRef50_G5JL55,UniRef:UniRef90_Q2G0B0
contig_1	Pyrodigal	gene	765870	766778	.	+	.	ID=GCA000560365_00727_gene;locus_tag=GCA000560365_00727;gene=ydhF
contig_1	Pyrodigal	CDS	765870	766778	.	+	0	ID=GCA000560365_00727;Name=NADP-dependent oxidoreductase domain-containing protein;locus_tag=GCA000560365_00727;product=NADP-dependent oxidoreductase domain-containing protein;gene=ydhF;Parent=GCA000560365_00727_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4989,COG:R,RefSeq:WP_000435108.1,SO:0001217,UniParc:UPI0000696BD8,UniRef:UniRef100_A0A5A8VP32,UniRef:UniRef50_Q2G0A9,UniRef:UniRef90_Q2G0A9
contig_1	Pyrodigal	gene	766813	767100	.	+	.	ID=GCA000560365_00728_gene;locus_tag=GCA000560365_00728
contig_1	Pyrodigal	CDS	766813	767100	.	+	0	ID=GCA000560365_00728;Name=hypothetical protein;locus_tag=GCA000560365_00728;product=hypothetical protein;Parent=GCA000560365_00728_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000180419.1,SO:0001217,UniParc:UPI0000054899,UniRef:UniRef100_Q2G0A8,UniRef:UniRef50_Q2G0A8,UniRef:UniRef90_Q2G0A8
contig_1	Pyrodigal	gene	767382	768935	.	+	.	ID=GCA000560365_00729_gene;locus_tag=GCA000560365_00729;gene=citT
contig_1	Pyrodigal	CDS	767382	768935	.	+	0	ID=GCA000560365_00729;Name=Sodium-dependent dicarboxylate transporter SdcS;locus_tag=GCA000560365_00729;product=Sodium-dependent dicarboxylate transporter SdcS;gene=citT;Parent=GCA000560365_00729_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0471,COG:G,RefSeq:WP_001288049.1,SO:0001217,UniParc:UPI00004B5B52,UniRef:UniRef100_Q2G0A7,UniRef:UniRef50_M7PBF6,UniRef:UniRef90_A0A9N8IKH9
contig_1	Pyrodigal	gene	769021	770394	.	+	.	ID=GCA000560365_00730_gene;locus_tag=GCA000560365_00730;gene=phrB
contig_1	Pyrodigal	CDS	769021	770394	.	+	0	ID=GCA000560365_00730;Name=Deoxyribodipyrimidine photo-lyase;locus_tag=GCA000560365_00730;product=Deoxyribodipyrimidine photo-lyase;gene=phrB;Parent=GCA000560365_00730_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0415,COG:L,RefSeq:WP_000952048.1,SO:0001217,UniParc:UPI00004B5B53,UniRef:UniRef100_A0A0E7MV68,UniRef:UniRef50_A0A0E7MV68,UniRef:UniRef90_A0A390QMX5
contig_1	Pyrodigal	gene	770549	770833	.	-	.	ID=GCA000560365_00731_gene;locus_tag=GCA000560365_00731
contig_1	Pyrodigal	CDS	770549	770833	.	-	0	ID=GCA000560365_00731;Name=Membrane spanning protein;locus_tag=GCA000560365_00731;product=Membrane spanning protein;Parent=GCA000560365_00731_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000154465.1,SO:0001217,UniParc:UPI00000D7813,UniRef:UniRef100_A0A7Z7QXJ8,UniRef:UniRef50_A0A2T4Q280,UniRef:UniRef90_A0A7Z7QXJ8
contig_1	Pyrodigal	gene	770830	771447	.	-	.	ID=GCA000560365_00732_gene;locus_tag=GCA000560365_00732
contig_1	Pyrodigal	CDS	770830	771447	.	-	0	ID=GCA000560365_00732;Name=DUF1361 domain-containing protein;locus_tag=GCA000560365_00732;product=DUF1361 domain-containing protein;Parent=GCA000560365_00732_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4330,COG:S,RefSeq:WP_001191874.1,SO:0001217,UniParc:UPI00004B5B54,UniRef:UniRef100_Q2G0A4,UniRef:UniRef50_Q2G0A4,UniRef:UniRef90_Q2G0A4
contig_1	Pyrodigal	gene	771633	772055	.	-	.	ID=GCA000560365_00733_gene;locus_tag=GCA000560365_00733;gene=aF0104
contig_1	Pyrodigal	CDS	771633	772055	.	-	0	ID=GCA000560365_00733;Name=PPC domain-containing protein;locus_tag=GCA000560365_00733;product=PPC domain-containing protein;gene=aF0104;Parent=GCA000560365_00733_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1661,COG:R,RefSeq:WP_000776018.1,SO:0001217,UniParc:UPI000005485D,UniRef:UniRef100_Q2G0A3,UniRef:UniRef50_Q2G0A3,UniRef:UniRef90_Q2G0A3
contig_1	Pyrodigal	gene	772264	773430	.	+	.	ID=GCA000560365_00734_gene;locus_tag=GCA000560365_00734;gene=norA
contig_1	Pyrodigal	CDS	772264	773430	.	+	0	ID=GCA000560365_00734;Name=Quinolone resistance protein NorA;locus_tag=GCA000560365_00734;product=Quinolone resistance protein NorA;Dbxref=GO:0005886,GO:0042910;gene=norA;Parent=GCA000560365_00734_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2814,COG:G,RefSeq:WP_001041272.1,SO:0001217,UniParc:UPI00000522D0,UniRef:UniRef100_Q5HHX4,UniRef:UniRef50_P0A0J4,UniRef:UniRef90_P0A0J4
contig_1	Pyrodigal	gene	773711	774175	.	+	.	ID=GCA000560365_00735_gene;locus_tag=GCA000560365_00735
contig_1	Pyrodigal	CDS	773711	774175	.	+	0	ID=GCA000560365_00735;Name=Lipoprotein;locus_tag=GCA000560365_00735;product=Lipoprotein;Parent=GCA000560365_00735_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00003B14D6,UniRef:UniRef100_Q2G0A1,UniRef:UniRef50_Q2G0A1,UniRef:UniRef90_Q2G0A1
contig_1	Pyrodigal	gene	774349	774831	.	+	.	ID=GCA000560365_00736_gene;locus_tag=GCA000560365_00736;gene=ybaK
contig_1	Pyrodigal	CDS	774349	774831	.	+	0	ID=GCA000560365_00736;Name=Cys-tRNA(Pro) deacylase;locus_tag=GCA000560365_00736;product=Cys-tRNA(Pro) deacylase;Dbxref=GO:0002161,GO:0043039;gene=ybaK;Parent=GCA000560365_00736_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2606,COG:J,KEGG:K03976,RefSeq:WP_001107241.1,SO:0001217,UniParc:UPI00000547C1,UniRef:UniRef100_Q2G0A0,UniRef:UniRef50_A0A2T4MLR5,UniRef:UniRef90_A0A0U1MHA1;ec_number=3.1.1.-
contig_1	Pyrodigal	gene	775081	775845	.	+	.	ID=GCA000560365_00737_gene;locus_tag=GCA000560365_00737;gene=glpR
contig_1	Pyrodigal	CDS	775081	775845	.	+	0	ID=GCA000560365_00737;Name=HTH deoR-type domain-containing protein;locus_tag=GCA000560365_00737;product=HTH deoR-type domain-containing protein;gene=glpR;Parent=GCA000560365_00737_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1349,COG:KG,RefSeq:WP_000972699.1,SO:0001217,UniParc:UPI000069AA73,UniRef:UniRef100_Q2G240,UniRef:UniRef50_Q2G240,UniRef:UniRef90_Q2G240
contig_1	Pyrodigal	gene	775842	776762	.	+	.	ID=GCA000560365_00738_gene;locus_tag=GCA000560365_00738;gene=pfkB
contig_1	Pyrodigal	CDS	775842	776762	.	+	0	ID=GCA000560365_00738;Name=1-phosphofructokinase;locus_tag=GCA000560365_00738;product=1-phosphofructokinase;Dbxref=GO:0008662;gene=pfkB;Parent=GCA000560365_00738_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1105,COG:G,KEGG:K00882,RefSeq:WP_000640743.1,SO:0001217,UniParc:UPI00000547BF,UniRef:UniRef100_Q2G238,UniRef:UniRef50_Q9KWK1,UniRef:UniRef90_Q9KWK1;ec_number=2.7.1.56
contig_1	Pyrodigal	gene	776768	778726	.	+	.	ID=GCA000560365_00739_gene;locus_tag=GCA000560365_00739;gene=ptsN
contig_1	Pyrodigal	CDS	776768	778726	.	+	0	ID=GCA000560365_00739;Name=PTS fructose transporter subunit IIC;locus_tag=GCA000560365_00739;product=PTS fructose transporter subunit IIC;gene=ptsN;Parent=GCA000560365_00739_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1762,COG:GT,RefSeq:WP_001266541.1,SO:0001217,UniParc:UPI0000696BD9,UniRef:UniRef100_Q2G239,UniRef:UniRef50_B9DK53,UniRef:UniRef90_A0A389U8J0
contig_1	Pyrodigal	gene	779034	780215	.	+	.	ID=GCA000560365_00740_gene;locus_tag=GCA000560365_00740;gene=nagA
contig_1	Pyrodigal	CDS	779034	780215	.	+	0	ID=GCA000560365_00740;Name=N-acetylglucosamine-6-phosphate deacetylase;locus_tag=GCA000560365_00740;product=N-acetylglucosamine-6-phosphate deacetylase;Dbxref=GO:0006044,GO:0008448;gene=nagA;Parent=GCA000560365_00740_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1820,COG:G,KEGG:K01443,RefSeq:WP_001292247.1,SO:0001217,UniParc:UPI00004B5B57,UniRef:UniRef100_A0A0D6G8V3,UniRef:UniRef50_A0A0D6G8V3,UniRef:UniRef90_A0A0D6G8V3;ec_number=3.5.1.25
contig_1	Pyrodigal	gene	780436	781785	.	+	.	ID=GCA000560365_00741_gene;locus_tag=GCA000560365_00741;gene=mpfA
contig_1	Pyrodigal	CDS	780436	781785	.	+	0	ID=GCA000560365_00741;Name=HlyC/CorC family transporter;locus_tag=GCA000560365_00741;product=HlyC/CorC family transporter;gene=mpfA;Parent=GCA000560365_00741_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1253,COG:PT,KEGG:K03699,RefSeq:WP_000450257.1,SO:0001217,UniParc:UPI00000D780F,UniRef:UniRef100_Q2G2T9,UniRef:UniRef50_A0A380G318,UniRef:UniRef90_Q2G2T9
contig_1	Pyrodigal	gene	782007	782846	.	+	.	ID=GCA000560365_00742_gene;locus_tag=GCA000560365_00742;gene=aRA1
contig_1	Pyrodigal	CDS	782007	782846	.	+	0	ID=GCA000560365_00742;Name=Aldo/keto reductase;locus_tag=GCA000560365_00742;product=Aldo/keto reductase;gene=aRA1;Parent=GCA000560365_00742_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0656,COG:Q,RefSeq:WP_000931237.1,SO:0001217,UniParc:UPI00000547BA,UniRef:UniRef100_Q2G2T8,UniRef:UniRef50_A0A7U7PXK1,UniRef:UniRef90_A0A0U1MH70
contig_1	Pyrodigal	gene	782978	783961	.	+	.	ID=GCA000560365_00743_gene;locus_tag=GCA000560365_00743;gene=csbB
contig_1	Pyrodigal	CDS	782978	783961	.	+	0	ID=GCA000560365_00743;Name=lipoteichoic acid-specific glycosylation protein CsbB;locus_tag=GCA000560365_00743;product=lipoteichoic acid-specific glycosylation protein CsbB;gene=csbB;Parent=GCA000560365_00743_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000702782,COG:COG0463,COG:M,KEGG:K25617,RefSeq:WP_000702782.1,SO:0001217,UniParc:UPI00000547B8,UniRef:UniRef100_Q2G2T7,UniRef:UniRef50_B9DKD4,UniRef:UniRef90_A0AAE8PA40;ec_number=2.4.-.-
contig_1	Pyrodigal	gene	784033	785088	.	-	.	ID=GCA000560365_00744_gene;locus_tag=GCA000560365_00744;gene=saeS
contig_1	Pyrodigal	CDS	784033	785088	.	-	0	ID=GCA000560365_00744;Name=two-component system sensor histidine kinase SaeS;locus_tag=GCA000560365_00744;product=two-component system sensor histidine kinase SaeS;Dbxref=GO:0000155,GO:0004721,GO:0005524,GO:0005886,GO:0016036;gene=saeS;Parent=GCA000560365_00744_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000244412,COG:COG0642,COG:T,KEGG:K10681,RefSeq:WP_000244412.1,SO:0001217,UniParc:UPI00000547B7,UniRef:UniRef100_Q2G2U1,UniRef:UniRef50_Q2G2U1,UniRef:UniRef90_Q2G2U1;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	785088	785774	.	-	.	ID=GCA000560365_00745_gene;locus_tag=GCA000560365_00745;gene=saeR
contig_1	Pyrodigal	CDS	785088	785774	.	-	0	ID=GCA000560365_00745;Name=response regulator transcription factor SaeR;locus_tag=GCA000560365_00745;product=response regulator transcription factor SaeR;Dbxref=GO:0000156,GO:0000976,GO:0005829,GO:0006355,GO:0032993;gene=saeR;Parent=GCA000560365_00745_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000149344,BlastRules:WP_001830352,COG:COG0745,COG:TK,KEGG:K10682,RefSeq:WP_000149344.1,SO:0001217,UniParc:UPI00000547B6,UniRef:UniRef100_Q2G2G2,UniRef:UniRef50_Q2G2G2,UniRef:UniRef90_Q2G2G2
contig_1	Pyrodigal	gene	785749	786222	.	-	.	ID=GCA000560365_00746_gene;locus_tag=GCA000560365_00746;gene=doxX
contig_1	Pyrodigal	CDS	785749	786222	.	-	0	ID=GCA000560365_00746;Name=DoxX family protein;locus_tag=GCA000560365_00746;product=DoxX family protein;gene=doxX;Parent=GCA000560365_00746_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001037807.1,SO:0001217,UniParc:UPI000018DB08,UniRef:UniRef100_Q2G2G1,UniRef:UniRef50_Q2G2G1,UniRef:UniRef90_Q2G2G1
contig_1	Pyrodigal	gene	786564	787004	.	-	.	ID=GCA000560365_00747_gene;locus_tag=GCA000560365_00747
contig_1	Pyrodigal	CDS	786564	787004	.	-	0	ID=GCA000560365_00747;Name=DM13 domain-containing protein;locus_tag=GCA000560365_00747;product=DM13 domain-containing protein;Parent=GCA000560365_00747_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001093553.1,SO:0001217,UniParc:UPI00000547B4,UniRef:UniRef100_Q2G2G0,UniRef:UniRef50_Q2G2G0,UniRef:UniRef90_Q2G2G0
contig_1	Pyrodigal	gene	787284	787868	.	-	.	ID=GCA000560365_00748_gene;locus_tag=GCA000560365_00748
contig_1	Pyrodigal	CDS	787284	787868	.	-	0	ID=GCA000560365_00748;Name=hypothetical protein;locus_tag=GCA000560365_00748;product=hypothetical protein;Parent=GCA000560365_00748_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000637687.1,SO:0001217,UniParc:UPI00004B5B58,UniRef:UniRef100_Q2G2F9,UniRef:UniRef50_Q2G2F9,UniRef:UniRef90_Q2G2F9
contig_1	Pyrodigal	gene	787967	788680	.	-	.	ID=GCA000560365_00749_gene;locus_tag=GCA000560365_00749;gene=queE
contig_1	Pyrodigal	CDS	787967	788680	.	-	0	ID=GCA000560365_00749;Name=7-carboxy-7-deazaguanine synthase QueE;locus_tag=GCA000560365_00749;product=7-carboxy-7-deazaguanine synthase QueE;Dbxref=GO:0006400,GO:0051539,GO:1904047;gene=queE;Parent=GCA000560365_00749_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0602,COG:H,KEGG:K10026,RefSeq:WP_001062972.1,SO:0001217,UniParc:UPI00000547B2,UniRef:UniRef100_Q2G1X7,UniRef:UniRef50_Q81G67,UniRef:UniRef90_A0A7Z7QY94;ec_number=4.3.99.3
contig_1	Pyrodigal	gene	788684	789103	.	-	.	ID=GCA000560365_00750_gene;locus_tag=GCA000560365_00750;gene=queD
contig_1	Pyrodigal	CDS	788684	789103	.	-	0	ID=GCA000560365_00750;Name=6-carboxytetrahydropterin synthase QueD;locus_tag=GCA000560365_00750;product=6-carboxytetrahydropterin synthase QueD;Dbxref=GO:0003824,GO:0008616;gene=queD;Parent=GCA000560365_00750_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0720,COG:H,KEGG:K01737,RefSeq:WP_000941336.1,SO:0001217,UniParc:UPI00000D7847,UniRef:UniRef100_Q2G1X5,UniRef:UniRef50_A0A0D6XSA1,UniRef:UniRef90_A0A2S6D445;ec_number=4.2.3.12
contig_1	Pyrodigal	gene	789105	789773	.	-	.	ID=GCA000560365_00751_gene;locus_tag=GCA000560365_00751;gene=queC
contig_1	Pyrodigal	CDS	789105	789773	.	-	0	ID=GCA000560365_00751;Name=7-cyano-7-deazaguanine synthase QueC;locus_tag=GCA000560365_00751;product=7-cyano-7-deazaguanine synthase QueC;Dbxref=GO:0005524,GO:0008270,GO:0008616,GO:0016879;gene=queC;Parent=GCA000560365_00751_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0603,COG:J,KEGG:K06920,RefSeq:WP_000446724.1,SO:0001217,UniParc:UPI00000D7650,UniRef:UniRef100_Q2G1X6,UniRef:UniRef50_O31675,UniRef:UniRef90_Q2G1X6;ec_number=6.3.4.20
contig_1	Pyrodigal	gene	790124	790717	.	+	.	ID=GCA000560365_00752_gene;locus_tag=GCA000560365_00752;gene=pabA
contig_1	Pyrodigal	CDS	790124	790717	.	+	0	ID=GCA000560365_00752;Name=Aminodeoxychorismate/anthranilate synthase component II;locus_tag=GCA000560365_00752;product=Aminodeoxychorismate/anthranilate synthase component II;gene=pabA;Parent=GCA000560365_00752_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0512,COG:EH,RefSeq:WP_000604514.1,SO:0001217,UniParc:UPI00000547AE,UniRef:UniRef100_Q2G099,UniRef:UniRef50_A0A2T7BWH4,UniRef:UniRef90_A0A2S6D430
contig_1	Pyrodigal	gene	790701	791852	.	+	.	ID=GCA000560365_00753_gene;locus_tag=GCA000560365_00753;gene=trpE
contig_1	Pyrodigal	CDS	790701	791852	.	+	0	ID=GCA000560365_00753;Name=Aminodeoxychorismate synthase component I;locus_tag=GCA000560365_00753;product=Aminodeoxychorismate synthase component I;gene=trpE;Parent=GCA000560365_00753_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0147,COG:EH,RefSeq:WP_001217785.1,SO:0001217,UniParc:UPI0000696BDA,UniRef:UniRef100_Q2G098,UniRef:UniRef50_A0A418IG77,UniRef:UniRef90_A0AAE2ZQN1
contig_1	Pyrodigal	gene	791852	792460	.	+	.	ID=GCA000560365_00754_gene;locus_tag=GCA000560365_00754;gene=ilvE
contig_1	Pyrodigal	CDS	791852	792460	.	+	0	ID=GCA000560365_00754;Name=Aminodeoxychorismate lyase;locus_tag=GCA000560365_00754;product=Aminodeoxychorismate lyase;gene=ilvE;Parent=GCA000560365_00754_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0115,COG:EH,RefSeq:WP_001175781.1,SO:0001217,UniParc:UPI00000547AC,UniRef:UniRef100_Q2G097,UniRef:UniRef50_A0A380H6Y2,UniRef:UniRef90_A0AAE8TJ44
contig_1	Infernal	gene	792592	792671	.	-	.	ID=GCA000560365_00755_gene;locus_tag=GCA000560365_00755;gene=sau-66
contig_1	Infernal	ncRNA	792592	792671	2.2e-19	-	.	ID=GCA000560365_00755;Name=Staphylococcus sRNA sau-66;locus_tag=GCA000560365_00755;product=Staphylococcus sRNA sau-66;Dbxref=RFAM:RF02395;Parent=GCA000560365_00755_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02395
contig_1	Pyrodigal	gene	792820	793530	.	+	.	ID=GCA000560365_00756_gene;locus_tag=GCA000560365_00756;gene=pxpB
contig_1	Pyrodigal	CDS	792820	793530	.	+	0	ID=GCA000560365_00756;Name=Carboxyltransferase domain-containing protein;locus_tag=GCA000560365_00756;product=Carboxyltransferase domain-containing protein;gene=pxpB;Parent=GCA000560365_00756_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2049,COG:E,RefSeq:WP_000708692.1,SO:0001217,UniParc:UPI00000547AA,UniRef:UniRef100_Q2G095,UniRef:UniRef50_A0A143PAI6,UniRef:UniRef90_Q2G095
contig_1	Pyrodigal	gene	793514	794518	.	+	.	ID=GCA000560365_00757_gene;locus_tag=GCA000560365_00757;gene=pxpC
contig_1	Pyrodigal	CDS	793514	794518	.	+	0	ID=GCA000560365_00757;Name=Carboxyltransferase domain-containing protein;locus_tag=GCA000560365_00757;product=Carboxyltransferase domain-containing protein;gene=pxpC;Parent=GCA000560365_00757_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1984,COG:E,RefSeq:WP_000022323.1,SO:0001217,UniParc:UPI00000547A9,UniRef:UniRef100_Q2G094,UniRef:UniRef50_Q2G094,UniRef:UniRef90_Q2G094
contig_1	Pyrodigal	gene	794992	796932	.	+	.	ID=GCA000560365_00758_gene;locus_tag=GCA000560365_00758;gene=ltaS
contig_1	Pyrodigal	CDS	794992	796932	.	+	0	ID=GCA000560365_00758;Name=polyglycerol-phosphate lipoteichoic acid synthase LtaS;locus_tag=GCA000560365_00758;product=polyglycerol-phosphate lipoteichoic acid synthase LtaS;Dbxref=GO:0005576,GO:0005886,GO:0016740,GO:0046872,GO:0070395,GO:0071555;gene=ltaS;Parent=GCA000560365_00758_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000098285,COG:COG1368,COG:M,KEGG:K19005,RefSeq:WP_000098285.1,SO:0001217,UniParc:UPI00000547A8,UniRef:UniRef100_Q2G093,UniRef:UniRef50_Q797B3,UniRef:UniRef90_Q2G093;ec_number=2.7.8.20
contig_1	Pyrodigal	gene	797209	799086	.	+	.	ID=GCA000560365_00759_gene;locus_tag=GCA000560365_00759;gene=abc-f
contig_1	Pyrodigal	CDS	797209	799086	.	+	0	ID=GCA000560365_00759;Name=ribosomal protection-like ABC-F family protein;locus_tag=GCA000560365_00759;product=ribosomal protection-like ABC-F family protein;Dbxref=GO:0003677,GO:0005524,GO:0016887;gene=abc-f;Parent=GCA000560365_00759_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0488,COG:R,SO:0001217,UniParc:UPI0001EFF0C4,UniRef:UniRef100_A0A5A8VP02,UniRef:UniRef50_S2Y7N2,UniRef:UniRef90_A0A7U7PXX1
contig_1	Pyrodigal	gene	799098	800879	.	+	.	ID=GCA000560365_00760_gene;locus_tag=GCA000560365_00760;gene=recQ
contig_1	Pyrodigal	CDS	799098	800879	.	+	0	ID=GCA000560365_00760;Name=DNA helicase RecQ;locus_tag=GCA000560365_00760;product=DNA helicase RecQ;Dbxref=GO:0003678,GO:0006310,GO:0009432;gene=recQ;Parent=GCA000560365_00760_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0514,COG:L,RefSeq:WP_000983677.1,SO:0001217,UniParc:UPI00000547A6,UniRef:UniRef100_Q2G090,UniRef:UniRef50_Q2G090,UniRef:UniRef90_Q2G090;ec_number=5.6.2.4
contig_1	Pyrodigal	gene	801101	802078	.	+	.	ID=GCA000560365_00761_gene;locus_tag=GCA000560365_00761;gene=opuBA
contig_1	Pyrodigal	CDS	801101	802078	.	+	0	ID=GCA000560365_00761;Name=ABC transporter ATP-binding protein;locus_tag=GCA000560365_00761;product=ABC transporter ATP-binding protein;gene=opuBA;Parent=GCA000560365_00761_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1125,COG:E,RefSeq:WP_000589260.1,SO:0001217,UniParc:UPI0000696BDC,UniRef:UniRef100_Q2G089,UniRef:UniRef50_D7UZC8,UniRef:UniRef90_A0A389QD38
contig_1	Pyrodigal	gene	802071	803585	.	+	.	ID=GCA000560365_00762_gene;locus_tag=GCA000560365_00762;gene=egtUBC
contig_1	Pyrodigal	CDS	802071	803585	.	+	0	ID=GCA000560365_00762;Name=putative ergothioneine transporter EgtUBC;locus_tag=GCA000560365_00762;product=putative ergothioneine transporter EgtUBC;Dbxref=GO:0015675,GO:0016597,GO:0016787,GO:0022857,GO:0031460,GO:0043190;gene=egtUBC;Parent=GCA000560365_00762_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1732,COG:M,RefSeq:WP_000180991.1,SO:0001217,UniParc:UPI00000547A2,UniRef:UniRef100_A0A0H2XK79,UniRef:UniRef50_A0A0H2XK79,UniRef:UniRef90_A0A0H2XK79
contig_1	Pyrodigal	gene	803825	804883	.	+	.	ID=GCA000560365_00763_gene;locus_tag=GCA000560365_00763;gene=hisC
contig_1	Pyrodigal	CDS	803825	804883	.	+	0	ID=GCA000560365_00763;Name=histidinol-phosphate transaminase;locus_tag=GCA000560365_00763;product=histidinol-phosphate transaminase;Dbxref=GO:0000105,GO:0004400,GO:0030170;gene=hisC;Parent=GCA000560365_00763_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0079,COG:E,KEGG:K00817,RefSeq:WP_000663030.1,SO:0001217,UniParc:UPI000012C89E,UniRef:UniRef100_Q2G087,UniRef:UniRef50_Q2G087,UniRef:UniRef90_Q2G087;ec_number=2.6.1.9
contig_1	Infernal	gene	804875	805098	.	+	.	ID=GCA000560365_00764_gene;locus_tag=GCA000560365_00764;gene=S35
contig_1	Infernal	ncRNA	804875	805098	1.5e-17	+	.	ID=GCA000560365_00764;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000560365_00764;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000560365_00764_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	805234	805776	.	+	.	ID=GCA000560365_00765_gene;locus_tag=GCA000560365_00765;gene=yorC
contig_1	Pyrodigal	CDS	805234	805776	.	+	0	ID=GCA000560365_00765;Name=Putative 5'(3')-deoxyribonucleotidase;locus_tag=GCA000560365_00765;product=Putative 5'(3')-deoxyribonucleotidase;Dbxref=GO:0008253,GO:0009223,GO:0046872;gene=yorC;Parent=GCA000560365_00765_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4502,COG:F,RefSeq:WP_000197273.1,SO:0001217,UniParc:UPI0000696BDD,UniRef:UniRef100_A0A5A8VJT2,UniRef:UniRef50_Q5HR07,UniRef:UniRef90_P66840;ec_number=3.1.3.-
contig_1	Pyrodigal	gene	806400	807317	.	-	.	ID=GCA000560365_00766_gene;locus_tag=GCA000560365_00766;gene=lCB5
contig_1	Pyrodigal	CDS	806400	807317	.	-	0	ID=GCA000560365_00766;Name=Putative lipid kinase SA0681;locus_tag=GCA000560365_00766;product=Putative lipid kinase SA0681;Dbxref=GO:0004143,GO:0005524,GO:0005886,GO:0008654,GO:0046872;gene=lCB5;Parent=GCA000560365_00766_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1597,COG:IR,RefSeq:WP_000429014.1,SO:0001217,UniParc:UPI000005479F,UniRef:UniRef100_Q2G084,UniRef:UniRef50_Q6GIR5,UniRef:UniRef90_Q6GIR5;ec_number=2.7.1.-
contig_1	Pyrodigal	gene	807587	809092	.	-	.	ID=GCA000560365_00767_gene;locus_tag=GCA000560365_00767;gene=yjdL
contig_1	Pyrodigal	CDS	807587	809092	.	-	0	ID=GCA000560365_00767;Name=Di/tripeptide permease YjdL;locus_tag=GCA000560365_00767;product=Di/tripeptide permease YjdL;gene=yjdL;Parent=GCA000560365_00767_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000193752.1,SO:0001217,UniParc:UPI0000696BDF,UniRef:UniRef100_A0A1S6A8I7,UniRef:UniRef50_Q2G082,UniRef:UniRef90_A0A2X2KIZ1
contig_1	Pyrodigal	gene	809433	809933	.	-	.	ID=GCA000560365_00768_gene;locus_tag=GCA000560365_00768;gene=queF
contig_1	Pyrodigal	CDS	809433	809933	.	-	0	ID=GCA000560365_00768;Name=preQ(1) synthase;locus_tag=GCA000560365_00768;product=preQ(1) synthase;Dbxref=GO:0005737,GO:0006400,GO:0008616,GO:0033739,GO:0046857;gene=queF;Parent=GCA000560365_00768_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0780,COG:J,RefSeq:WP_000930014.1,SO:0001217,UniParc:UPI000005479D,UniRef:UniRef100_Q2G081,UniRef:UniRef50_Q2G081,UniRef:UniRef90_Q2G081;ec_number=1.7.1.13
contig_1	Pyrodigal	gene	809953	810819	.	-	.	ID=GCA000560365_00769_gene;locus_tag=GCA000560365_00769;gene=rhaT
contig_1	Pyrodigal	CDS	809953	810819	.	-	0	ID=GCA000560365_00769;Name=EamA domain-containing protein;locus_tag=GCA000560365_00769;product=EamA domain-containing protein;gene=rhaT;Parent=GCA000560365_00769_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0697,COG:GER,RefSeq:WP_001068497.1,SO:0001217,UniParc:UPI00000D9CFA,UniRef:UniRef100_Q2G080,UniRef:UniRef50_Q2G080,UniRef:UniRef90_Q2G080
contig_1	Pyrodigal	gene	811620	812018	.	+	.	ID=GCA000560365_00770_gene;locus_tag=GCA000560365_00770;gene=nrdI
contig_1	Pyrodigal	CDS	811620	812018	.	+	0	ID=GCA000560365_00770;Name=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;locus_tag=GCA000560365_00770;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;Dbxref=GO:0009263,GO:0010181,GO:0036211;gene=nrdI;Parent=GCA000560365_00770_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1780,COG:F,KEGG:K03647,RefSeq:WP_000692521.1,SO:0001217,UniParc:UPI00001304E3,UniRef:UniRef100_Q2G079,UniRef:UniRef50_Q2G079,UniRef:UniRef90_Q2G079
contig_1	Pyrodigal	gene	811981	814086	.	+	.	ID=GCA000560365_00771_gene;locus_tag=GCA000560365_00771;gene=nrdE
contig_1	Pyrodigal	CDS	811981	814086	.	+	0	ID=GCA000560365_00771;Name=class 1b ribonucleoside-diphosphate reductase subunit alpha;locus_tag=GCA000560365_00771;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;Dbxref=GO:0004748,GO:0005524,GO:0006260;gene=nrdE;Parent=GCA000560365_00771_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0209,COG:F,RefSeq:WP_000855505.1,SO:0001217,UniParc:UPI000005479A,UniRef:UniRef100_Q2G078,UniRef:UniRef50_A0A240A193,UniRef:UniRef90_A0AAE3D4Q3;ec_number=1.17.4.1
contig_1	Pyrodigal	gene	814204	815175	.	+	.	ID=GCA000560365_00772_gene;locus_tag=GCA000560365_00772;gene=nrdF
contig_1	Pyrodigal	CDS	814204	815175	.	+	0	ID=GCA000560365_00772;Name=class 1b ribonucleoside-diphosphate reductase subunit beta;locus_tag=GCA000560365_00772;product=class 1b ribonucleoside-diphosphate reductase subunit beta;Dbxref=GO:0004748,GO:0005971,GO:0009263;gene=nrdF;Parent=GCA000560365_00772_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0208,COG:F,RefSeq:WP_000562498.1,SO:0001217,UniParc:UPI0000054799,UniRef:UniRef100_Q2G077,UniRef:UniRef50_A0A1L8Y4Q5,UniRef:UniRef90_A0A1L8Y4Q5;ec_number=1.17.4.1
contig_1	Pyrodigal	gene	815841	816854	.	+	.	ID=GCA000560365_00773_gene;locus_tag=GCA000560365_00773;gene=ceuB
contig_1	Pyrodigal	CDS	815841	816854	.	+	0	ID=GCA000560365_00773;Name=FatD;locus_tag=GCA000560365_00773;product=FatD;gene=ceuB;Parent=GCA000560365_00773_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4606,COG:P,SO:0001217,UniParc:UPI0000054795,UniRef:UniRef100_A0A0D6I039,UniRef:UniRef50_P94418,UniRef:UniRef90_A0A0D6I039
contig_1	Pyrodigal	gene	816841	817797	.	+	.	ID=GCA000560365_00774_gene;locus_tag=GCA000560365_00774;gene=ceuC
contig_1	Pyrodigal	CDS	816841	817797	.	+	0	ID=GCA000560365_00774;Name=Iron (Fe+3) ABC superfamily ATP binding cassette transporter%2C membrane protein;locus_tag=GCA000560365_00774;product=Iron (Fe+3) ABC superfamily ATP binding cassette transporter%2C membrane protein;gene=ceuC;Parent=GCA000560365_00774_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4605,COG:P,RefSeq:WP_001245577.1,SO:0001217,UniParc:UPI00000CAA00,UniRef:UniRef100_W8TNI3,UniRef:UniRef50_W8TNI3,UniRef:UniRef90_W8TNI3
contig_1	Pyrodigal	gene	817794	818555	.	+	.	ID=GCA000560365_00775_gene;locus_tag=GCA000560365_00775;gene=ceuD
contig_1	Pyrodigal	CDS	817794	818555	.	+	0	ID=GCA000560365_00775;Name=ABC transporter domain-containing protein;locus_tag=GCA000560365_00775;product=ABC transporter domain-containing protein;gene=ceuD;Parent=GCA000560365_00775_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4604,COG:P,RefSeq:WP_000616842.1,SO:0001217,UniParc:UPI0000054793,UniRef:UniRef100_Q2G072,UniRef:UniRef50_Q81XB3,UniRef:UniRef90_Q2G072
contig_1	Pyrodigal	gene	818674	819702	.	+	.	ID=GCA000560365_00776_gene;locus_tag=GCA000560365_00776;gene=ceuA
contig_1	Pyrodigal	CDS	818674	819702	.	+	0	ID=GCA000560365_00776;Name=Fe/B12 periplasmic-binding domain-containing protein;locus_tag=GCA000560365_00776;product=Fe/B12 periplasmic-binding domain-containing protein;gene=ceuA;Parent=GCA000560365_00776_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4607,COG:P,RefSeq:WP_000754443.1,SO:0001217,UniParc:UPI0000054792,UniRef:UniRef100_Q2G071,UniRef:UniRef50_A0A239ZZP9,UniRef:UniRef90_Q2G071
contig_1	Pyrodigal	gene	820019	820333	.	-	.	ID=GCA000560365_00777_gene;locus_tag=GCA000560365_00777;gene=hot13
contig_1	Pyrodigal	CDS	820019	820333	.	-	0	ID=GCA000560365_00777;Name=CHY-type domain-containing protein;locus_tag=GCA000560365_00777;product=CHY-type domain-containing protein;gene=hot13;Parent=GCA000560365_00777_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4357,COG:O,RefSeq:WP_001127269.1,SO:0001217,UniParc:UPI00000D78A9,UniRef:UniRef100_Q2G070,UniRef:UniRef50_A0A166MHJ2,UniRef:UniRef90_Q2G070
contig_1	Pyrodigal	gene	820351	821274	.	-	.	ID=GCA000560365_00778_gene;locus_tag=GCA000560365_00778;gene=murB
contig_1	Pyrodigal	CDS	820351	821274	.	-	0	ID=GCA000560365_00778;Name=UDP-N-acetylmuramate dehydrogenase;locus_tag=GCA000560365_00778;product=UDP-N-acetylmuramate dehydrogenase;Dbxref=GO:0005829,GO:0008360,GO:0008762,GO:0009252,GO:0051301,GO:0071555,GO:0071949;gene=murB;Parent=GCA000560365_00778_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0812,COG:M,RefSeq:WP_000608440.1,SO:0001217,UniParc:UPI00000025F4,UniRef:UniRef100_Q2G069,UniRef:UniRef50_A4ILI2,UniRef:UniRef90_Q2G069;ec_number=1.3.1.98
contig_1	Pyrodigal	gene	821401	821919	.	-	.	ID=GCA000560365_00779_gene;locus_tag=GCA000560365_00779;gene=grpB
contig_1	Pyrodigal	CDS	821401	821919	.	-	0	ID=GCA000560365_00779;Name=GrpB family protein;locus_tag=GCA000560365_00779;product=GrpB family protein;gene=grpB;Parent=GCA000560365_00779_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2320,COG:R,RefSeq:WP_000287207.1,SO:0001217,UniParc:UPI000005478E,UniRef:UniRef100_Q2G068,UniRef:UniRef50_Q5HQZ0,UniRef:UniRef90_Q2G068
contig_1	Pyrodigal	gene	822039	822917	.	+	.	ID=GCA000560365_00780_gene;locus_tag=GCA000560365_00780
contig_1	Pyrodigal	CDS	822039	822917	.	+	0	ID=GCA000560365_00780;Name=EMYY motif lipoprotein;locus_tag=GCA000560365_00780;product=EMYY motif lipoprotein;Parent=GCA000560365_00780_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000724887.1,SO:0001217,UniParc:UPI00000D77E2,UniRef:UniRef100_Q2G067,UniRef:UniRef50_A0A653Z4B0,UniRef:UniRef90_Q2G067
contig_1	Pyrodigal	gene	823071	823391	.	+	.	ID=GCA000560365_00781_gene;locus_tag=GCA000560365_00781;gene=ytxJ
contig_1	Pyrodigal	CDS	823071	823391	.	+	0	ID=GCA000560365_00781;Name=Bacillithiol system redox-active protein YtxJ;locus_tag=GCA000560365_00781;product=Bacillithiol system redox-active protein YtxJ;gene=ytxJ;Parent=GCA000560365_00781_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K26959,RefSeq:WP_000985617.1,SO:0001217,UniParc:UPI00000D78B4,UniRef:UniRef100_Q2G066,UniRef:UniRef50_Q2G066,UniRef:UniRef90_Q2G066
contig_1	Pyrodigal	gene	823816	824940	.	+	.	ID=GCA000560365_00782_gene;locus_tag=GCA000560365_00782;gene=glxK
contig_1	Pyrodigal	CDS	823816	824940	.	+	0	ID=GCA000560365_00782;Name=Glycerate kinase;locus_tag=GCA000560365_00782;product=Glycerate kinase;gene=glxK;Parent=GCA000560365_00782_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1929,COG:G,KEGG:K00865,RefSeq:WP_000866747.1,SO:0001217,UniParc:UPI0000696BE0,UniRef:UniRef100_A0A5C1MVR2,UniRef:UniRef50_A0A6N3ELY9,UniRef:UniRef90_Q2G065;ec_number=2.7.1.165
contig_1	Pyrodigal	gene	825129	826355	.	-	.	ID=GCA000560365_00783_gene;locus_tag=GCA000560365_00783;gene=pepT
contig_1	Pyrodigal	CDS	825129	826355	.	-	0	ID=GCA000560365_00783;Name=peptidase T;locus_tag=GCA000560365_00783;product=peptidase T;Dbxref=GO:0005829,GO:0006508,GO:0008237,GO:0008270,GO:0043171,GO:0045148;gene=pepT;Parent=GCA000560365_00783_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2195,COG:E,KEGG:K01258,RefSeq:WP_000795826.1,SO:0001217,UniParc:UPI0000054789,UniRef:UniRef100_Q2G064,UniRef:UniRef50_P55179,UniRef:UniRef90_Q2G064;ec_number=3.4.11.4
contig_1	Pyrodigal	gene	826369	826863	.	-	.	ID=GCA000560365_00784_gene;locus_tag=GCA000560365_00784;gene=yjjB
contig_1	Pyrodigal	CDS	826369	826863	.	-	0	ID=GCA000560365_00784;Name=Threonine/Serine exporter ThrE domain-containing protein;locus_tag=GCA000560365_00784;product=Threonine/Serine exporter ThrE domain-containing protein;gene=yjjB;Parent=GCA000560365_00784_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG3610,RefSeq:WP_000899890.1,SO:0001217,UniParc:UPI00000522D1,UniRef:UniRef100_Q2G063,UniRef:UniRef50_Q2G063,UniRef:UniRef90_Q2G063
contig_1	Pyrodigal	gene	826881	827642	.	-	.	ID=GCA000560365_00785_gene;locus_tag=GCA000560365_00785;gene=yjjP
contig_1	Pyrodigal	CDS	826881	827642	.	-	0	ID=GCA000560365_00785;Name=Threonine/serine exporter-like N-terminal domain-containing protein;locus_tag=GCA000560365_00785;product=Threonine/serine exporter-like N-terminal domain-containing protein;gene=yjjP;Parent=GCA000560365_00785_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG2966,RefSeq:WP_001113406.1,SO:0001217,UniParc:UPI000005226C,UniRef:UniRef100_Q2G062,UniRef:UniRef50_A0A853V662,UniRef:UniRef90_Q2G062
contig_1	Pyrodigal	gene	827838	828908	.	-	.	ID=GCA000560365_00786_gene;locus_tag=GCA000560365_00786;gene=gGDEF
contig_1	Pyrodigal	CDS	827838	828908	.	-	0	ID=GCA000560365_00786;Name=putative membrane protein MW0708;locus_tag=GCA000560365_00786;product=putative membrane protein MW0708;Dbxref=GO:0000155,GO:0005886,GO:0043709,GO:0052621,GO:0071555,GO:1902201;gene=gGDEF;Parent=GCA000560365_00786_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2199,COG:T,RefSeq:WP_000460983.1,SO:0001217,UniParc:UPI0000054788,UniRef:UniRef100_Q2G061,UniRef:UniRef50_Q5HQY3,UniRef:UniRef90_Q2G061
contig_1	Pyrodigal	gene	829226	830281	.	+	.	ID=GCA000560365_00787_gene;locus_tag=GCA000560365_00787;gene=rfe
contig_1	Pyrodigal	CDS	829226	830281	.	+	0	ID=GCA000560365_00787;Name=Glycosyl transferase family protein;locus_tag=GCA000560365_00787;product=Glycosyl transferase family protein;gene=rfe;Parent=GCA000560365_00787_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0472,COG:M,KEGG:K02851,RefSeq:WP_000258151.1,SO:0001217,UniParc:UPI0000054787,UniRef:UniRef100_Q2G060,UniRef:UniRef50_A0A380GAZ8,UniRef:UniRef90_Q53761;ec_number=2.7.8.35
contig_1	Pyrodigal	gene	830451	831092	.	-	.	ID=GCA000560365_00788_gene;locus_tag=GCA000560365_00788;gene=yIH1
contig_1	Pyrodigal	CDS	830451	831092	.	-	0	ID=GCA000560365_00788;Name=YigZ family protein;locus_tag=GCA000560365_00788;product=YigZ family protein;gene=yIH1;Parent=GCA000560365_00788_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1739,COG:R,RefSeq:WP_000192947.1,SO:0001217,UniParc:UPI0000054786,UniRef:UniRef100_Q2G059,UniRef:UniRef50_Q2G059,UniRef:UniRef90_Q2G059
contig_1	Pyrodigal	gene	831236	832102	.	+	.	ID=GCA000560365_00789_gene;locus_tag=GCA000560365_00789;gene=fakB1
contig_1	Pyrodigal	CDS	831236	832102	.	+	0	ID=GCA000560365_00789;Name=fatty acid kinase binding subunit FakB1;locus_tag=GCA000560365_00789;product=fatty acid kinase binding subunit FakB1;Dbxref=GO:0008289;gene=fakB1;Parent=GCA000560365_00789_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1307,COG:I,RefSeq:WP_000686342.1,SO:0001217,UniParc:UPI0000139C1F,UniRef:UniRef100_Q8NXM4,UniRef:UniRef50_P0A0N1,UniRef:UniRef90_P0A0N1
contig_1	Pyrodigal	gene	832466	833548	.	+	.	ID=GCA000560365_00790_gene;locus_tag=GCA000560365_00790;gene=comFA
contig_1	Pyrodigal	CDS	832466	833548	.	+	0	ID=GCA000560365_00790;Name=Comf operon protein 1;locus_tag=GCA000560365_00790;product=Comf operon protein 1;gene=comFA;Parent=GCA000560365_00790_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4098,COG:L,RefSeq:WP_001548033.1,SO:0001217,UniParc:UPI0000054783,UniRef:UniRef100_X5EK03,UniRef:UniRef50_S2XU73,UniRef:UniRef90_X5EK03
contig_1	Pyrodigal	gene	833541	834215	.	+	.	ID=GCA000560365_00791_gene;locus_tag=GCA000560365_00791;gene=comFC
contig_1	Pyrodigal	CDS	833541	834215	.	+	0	ID=GCA000560365_00791;Name=ComF family protein;locus_tag=GCA000560365_00791;product=ComF family protein;gene=comFC;Parent=GCA000560365_00791_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1040,COG:R,KEGG:K02242,RefSeq:WP_001057965.1,SO:0001217,UniParc:UPI00000D76CA,UniRef:UniRef100_Q2G056,UniRef:UniRef50_Q2G056,UniRef:UniRef90_Q2G056
contig_1	Pyrodigal	gene	834276	834848	.	+	.	ID=GCA000560365_00792_gene;locus_tag=GCA000560365_00792;gene=hpf
contig_1	Pyrodigal	CDS	834276	834848	.	+	0	ID=GCA000560365_00792;Name=ribosome hibernation-promoting factor%2C HPF/YfiA family;locus_tag=GCA000560365_00792;product=ribosome hibernation-promoting factor%2C HPF/YfiA family;Dbxref=GO:0005840,GO:0022627,GO:0043024,GO:0045182,GO:0045900;gene=hpf;Parent=GCA000560365_00792_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1544,COG:J,RefSeq:WP_000617735.1,SO:0001217,UniParc:UPI0000054781,UniRef:UniRef100_Q2G055,UniRef:UniRef50_P28368,UniRef:UniRef90_Q2G055
contig_1	Pyrodigal	gene	835262	837793	.	+	.	ID=GCA000560365_00793_gene;locus_tag=GCA000560365_00793;gene=secA
contig_1	Pyrodigal	CDS	835262	837793	.	+	0	ID=GCA000560365_00793;Name=preprotein translocase subunit SecA;locus_tag=GCA000560365_00793;product=preprotein translocase subunit SecA;Dbxref=GO:0005524,GO:0005829,GO:0005886,GO:0006605,GO:0006886,GO:0008564,GO:0017038,GO:0031522,GO:0043952,GO:0046872,GO:0065002;gene=secA;Parent=GCA000560365_00793_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0653,COG:U,KEGG:K03070,RefSeq:WP_000506531.1,SO:0001217,UniParc:UPI000005226D,UniRef:UniRef100_O06446,UniRef:UniRef50_O06446,UniRef:UniRef90_O06446;ec_number=7.4.2.8
contig_1	Pyrodigal	gene	838226	839218	.	+	.	ID=GCA000560365_00794_gene;locus_tag=GCA000560365_00794;gene=prfB
contig_1	Pyrodigal	CDS	838226	839218	.	+	0	ID=GCA000560365_00794;Name=peptide chain release factor 2;locus_tag=GCA000560365_00794;product=peptide chain release factor 2;Dbxref=GO:0005737,GO:0006415,GO:0016149,GO:0075523;gene=prfB;Parent=GCA000560365_00794_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1186,COG:J,KEGG:K02836,SO:0001217,UniParc:UPI00000CAD02,UniRef:UniRef100_Q2G052,UniRef:UniRef50_Q49VV3,UniRef:UniRef90_Q6GIN7
contig_1	Pyrodigal	gene	839627	840466	.	+	.	ID=GCA000560365_00795_gene;locus_tag=GCA000560365_00795
contig_1	Pyrodigal	CDS	839627	840466	.	+	0	ID=GCA000560365_00795;Name=putative autolysin LDP;locus_tag=GCA000560365_00795;product=putative autolysin LDP;Dbxref=GO:0008745,GO:0008932,GO:0031640,GO:0042742,GO:0071555;Parent=GCA000560365_00795_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3942,COG:M,RefSeq:WP_000749380.1,SO:0001217,UniParc:UPI000005477F,UniRef:UniRef100_Q2G278,UniRef:UniRef50_Q2G278,UniRef:UniRef90_Q2G278;ec_number=3.5.1.28
contig_1	Pyrodigal	gene	840640	841290	.	+	.	ID=GCA000560365_00796_gene;locus_tag=GCA000560365_00796;gene=yfbR
contig_1	Pyrodigal	CDS	840640	841290	.	+	0	ID=GCA000560365_00796;Name=HD domain-containing protein;locus_tag=GCA000560365_00796;product=HD domain-containing protein;gene=yfbR;Parent=GCA000560365_00796_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1896,COG:FR,RefSeq:WP_000538141.1,SO:0001217,UniParc:UPI00000D7871,UniRef:UniRef100_Q2G277,UniRef:UniRef50_A0A239ZXJ0,UniRef:UniRef90_A0A2K4AJY4
contig_1	Pyrodigal	gene	841287	841523	.	+	.	ID=GCA000560365_00797_gene;locus_tag=GCA000560365_00797;gene=csbA
contig_1	Pyrodigal	CDS	841287	841523	.	+	0	ID=GCA000560365_00797;Name=DUF2198 domain-containing protein;locus_tag=GCA000560365_00797;product=DUF2198 domain-containing protein;gene=csbA;Parent=GCA000560365_00797_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4897,COG:S,RefSeq:WP_000638419.1,SO:0001217,UniParc:UPI000005477D,UniRef:UniRef100_Q2G051,UniRef:UniRef50_Q2G051,UniRef:UniRef90_Q2G051
contig_1	Pyrodigal	gene	841792	843777	.	+	.	ID=GCA000560365_00798_gene;locus_tag=GCA000560365_00798;gene=uvrB
contig_1	Pyrodigal	CDS	841792	843777	.	+	0	ID=GCA000560365_00798;Name=excinuclease ABC subunit UvrB;locus_tag=GCA000560365_00798;product=excinuclease ABC subunit UvrB;Dbxref=GO:0003677,GO:0005515,GO:0005524,GO:0005737,GO:0006289,GO:0009380,GO:0009381,GO:0009432,GO:0016787,GO:0016887;gene=uvrB;Parent=GCA000560365_00798_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0556,COG:L,KEGG:K03702,RefSeq:WP_000229253.1,SO:0001217,UniParc:UPI0000696BE1,UniRef:UniRef100_Q2G047,UniRef:UniRef50_P56981,UniRef:UniRef90_Q4L4I5;ec_number=3.1.25.-
contig_1	Pyrodigal	gene	843785	846631	.	+	.	ID=GCA000560365_00799_gene;locus_tag=GCA000560365_00799;gene=uvrA
contig_1	Pyrodigal	CDS	843785	846631	.	+	0	ID=GCA000560365_00799;Name=excinuclease ABC subunit UvrA;locus_tag=GCA000560365_00799;product=excinuclease ABC subunit UvrA;Dbxref=GO:0003677,GO:0005524,GO:0005737,GO:0006289,GO:0008270,GO:0009380,GO:0009381,GO:0009432,GO:0016887;gene=uvrA;Parent=GCA000560365_00799_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0178,COG:L,KEGG:K03701,RefSeq:WP_000662675.1,SO:0001217,UniParc:UPI0000696BE2,UniRef:UniRef100_A0A1S6BNP7,UniRef:UniRef50_Q8F435,UniRef:UniRef90_P63382;ec_number=3.1.25.-
contig_1	Infernal	gene	846872	847160	.	+	.	ID=GCA000560365_00800_gene;locus_tag=GCA000560365_00800;gene=S35
contig_1	Infernal	ncRNA	846872	847160	1.6e-11	+	.	ID=GCA000560365_00800;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000560365_00800;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000560365_00800_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	847293	848225	.	+	.	ID=GCA000560365_00801_gene;locus_tag=GCA000560365_00801;gene=hprK
contig_1	Pyrodigal	CDS	847293	848225	.	+	0	ID=GCA000560365_00801;Name=HPr(Ser) kinase/phosphatase;locus_tag=GCA000560365_00801;product=HPr(Ser) kinase/phosphatase;Dbxref=GO:0000155,GO:0000160,GO:0000287,GO:0004674,GO:0004712,GO:0005524,GO:0006109;gene=hprK;Parent=GCA000560365_00801_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1493,COG:T,KEGG:K06023,RefSeq:WP_000958224.1,SO:0001217,UniParc:UPI0000054778,UniRef:UniRef100_Q2G045,UniRef:UniRef50_O34483,UniRef:UniRef90_Q2G045;ec_number=2.7.4.-
contig_1	Pyrodigal	gene	848231	849070	.	+	.	ID=GCA000560365_00802_gene;locus_tag=GCA000560365_00802;gene=lgt
contig_1	Pyrodigal	CDS	848231	849070	.	+	0	ID=GCA000560365_00802;Name=prolipoprotein diacylglyceryl transferase;locus_tag=GCA000560365_00802;product=prolipoprotein diacylglyceryl transferase;Dbxref=GO:0005886,GO:0008961,GO:0009249,GO:0016020,GO:0042158;gene=lgt;Parent=GCA000560365_00802_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0682,COG:M,RefSeq:WP_000513308.1,SO:0001217,UniParc:UPI0000054777,UniRef:UniRef100_Q2G044,UniRef:UniRef50_Q2G044,UniRef:UniRef90_Q2G044;ec_number=2.5.1.145
contig_1	Pyrodigal	gene	849078	849563	.	+	.	ID=GCA000560365_00803_gene;locus_tag=GCA000560365_00803;gene=wbbJ
contig_1	Pyrodigal	CDS	849078	849563	.	+	0	ID=GCA000560365_00803;Name=Putative acetyltransferase MW0724;locus_tag=GCA000560365_00803;product=Putative acetyltransferase MW0724;Dbxref=GO:0016746;gene=wbbJ;Parent=GCA000560365_00803_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0110,COG:R,RefSeq:WP_001224793.1,SO:0001217,UniParc:UPI00000D7694,UniRef:UniRef100_Q5HHQ6,UniRef:UniRef50_Q5HHQ6,UniRef:UniRef90_Q5HHQ6;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	849571	851010	.	+	.	ID=GCA000560365_00804_gene;locus_tag=GCA000560365_00804
contig_1	Pyrodigal	CDS	849571	851010	.	+	0	ID=GCA000560365_00804;Name=Beta-barrel assembly-enhancing protease;locus_tag=GCA000560365_00804;product=Beta-barrel assembly-enhancing protease;Parent=GCA000560365_00804_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000057551.1,SO:0001217,UniParc:UPI0000696BE3,UniRef:UniRef100_A0A0E8GB80,UniRef:UniRef50_A0A2T4LUS3,UniRef:UniRef90_A0A389NUI4
contig_1	Pyrodigal	gene	851077	852012	.	+	.	ID=GCA000560365_00805_gene;locus_tag=GCA000560365_00805;gene=trxB
contig_1	Pyrodigal	CDS	851077	852012	.	+	0	ID=GCA000560365_00805;Name=thioredoxin-disulfide reductase;locus_tag=GCA000560365_00805;product=thioredoxin-disulfide reductase;Dbxref=GO:0004791,GO:0005737,GO:0019430,GO:0071949;gene=trxB;Parent=GCA000560365_00805_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0492,COG:O,KEGG:K00384,RefSeq:WP_000134963.1,SO:0001217,UniParc:UPI0000054774,UniRef:UniRef100_Q5HHQ4,UniRef:UniRef50_P80880,UniRef:UniRef90_Q5HHQ4;ec_number=1.8.1.9
contig_1	Infernal	gene	852497	852748	.	+	.	ID=GCA000560365_00806_gene;locus_tag=GCA000560365_00806;gene=S35
contig_1	Infernal	ncRNA	852497	852748	2.1e-24	+	.	ID=GCA000560365_00806;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000560365_00806;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000560365_00806_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	852892	853803	.	+	.	ID=GCA000560365_00807_gene;locus_tag=GCA000560365_00807;gene=rapZ
contig_1	Pyrodigal	CDS	852892	853803	.	+	0	ID=GCA000560365_00807;Name=RNase adapter RapZ;locus_tag=GCA000560365_00807;product=RNase adapter RapZ;Dbxref=GO:0005524,GO:0005525;gene=rapZ;Parent=GCA000560365_00807_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1660,COG:T,KEGG:K06958,RefSeq:WP_000369722.1,SO:0001217,UniParc:UPI000004740A,UniRef:UniRef100_Q2G039,UniRef:UniRef50_Q2G039,UniRef:UniRef90_Q2G039
contig_1	Pyrodigal	gene	853800	854795	.	+	.	ID=GCA000560365_00808_gene;locus_tag=GCA000560365_00808;gene=cofD
contig_1	Pyrodigal	CDS	853800	854795	.	+	0	ID=GCA000560365_00808;Name=Gluconeogenesis factor;locus_tag=GCA000560365_00808;product=Gluconeogenesis factor;gene=cofD;Parent=GCA000560365_00808_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0391,COG:GH,RefSeq:WP_001248939.1,SO:0001217,UniParc:UPI000005476F,UniRef:UniRef100_Q2G038,UniRef:UniRef50_A0A0U1MHM9,UniRef:UniRef90_A0A0U1MHM9
contig_1	Pyrodigal	gene	854905	855849	.	+	.	ID=GCA000560365_00809_gene;locus_tag=GCA000560365_00809;gene=whiA
contig_1	Pyrodigal	CDS	854905	855849	.	+	0	ID=GCA000560365_00809;Name=DNA-binding protein WhiA;locus_tag=GCA000560365_00809;product=DNA-binding protein WhiA;Dbxref=GO:0003677,GO:0043937,GO:0051301;gene=whiA;Parent=GCA000560365_00809_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1481,COG:K,RefSeq:WP_000006551.1,SO:0001217,UniParc:UPI000005476E,UniRef:UniRef100_Q2G037,UniRef:UniRef50_O06975,UniRef:UniRef90_Q2G037
contig_1	tRNAscan-SE	gene	856165	856236	.	-	.	ID=GCA000560365_00810_gene;locus_tag=GCA000560365_00810;gene=trnR;pseudogene=unknown
contig_1	tRNAscan-SE	tRNA	856165	856236	.	-	.	ID=GCA000560365_00810;Name=tRNA-Arg(ccg);locus_tag=GCA000560365_00810;product=tRNA-Arg(ccg);gene=trnR;pseudogene=unknown;anti_codon=ccg;amino_acid=Arg;Parent=GCA000560365_00810_gene;inference=profile:tRNAscan:2.0;Note=SO:0001036
contig_1	Pyrodigal	gene	856423	857010	.	+	.	ID=GCA000560365_00811_gene;locus_tag=GCA000560365_00811;gene=clpP
contig_1	Pyrodigal	CDS	856423	857010	.	+	0	ID=GCA000560365_00811;Name=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;locus_tag=GCA000560365_00811;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;Dbxref=GO:0004176,GO:0004252,GO:0005737,GO:0006508,GO:0006515,GO:0009368,GO:0051117;gene=clpP;Parent=GCA000560365_00811_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0740,COG:O,KEGG:K01358,RefSeq:WP_001049165.1,SO:0001217,UniParc:UPI000005476D,UniRef:UniRef100_Q2G036,UniRef:UniRef50_P80244,UniRef:UniRef90_Q2G036;ec_number=3.4.21.92
contig_1	Pyrodigal	gene	857253	858122	.	-	.	ID=GCA000560365_00812_gene;locus_tag=GCA000560365_00812;gene=yfcH
contig_1	Pyrodigal	CDS	857253	858122	.	-	0	ID=GCA000560365_00812;Name=Epimerase family protein SAUSA300_0753;locus_tag=GCA000560365_00812;product=Epimerase family protein SAUSA300_0753;gene=yfcH;Parent=GCA000560365_00812_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1090,COG:R,KEGG:K07071,SO:0001217,UniParc:UPI0002CAB3E6,UniRef:UniRef100_Q2G035,UniRef:UniRef50_Q2G035,UniRef:UniRef90_Q2G035
contig_1	Infernal	gene	858304	858427	.	+	.	ID=GCA000560365_00813_gene;locus_tag=GCA000560365_00813;gene=rsaH
contig_1	Infernal	ncRNA	858304	858427	5.4e-21	+	.	ID=GCA000560365_00813;Name=RNA Staph. aureus H;locus_tag=GCA000560365_00813;gene=rsaH;product=RNA Staph. aureus H;Dbxref=RFAM:RF01821;Parent=GCA000560365_00813_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01821
contig_1	Pyrodigal	gene	858857	859486	.	+	.	ID=GCA000560365_00814_gene;locus_tag=GCA000560365_00814
contig_1	Pyrodigal	CDS	858857	859486	.	+	0	ID=GCA000560365_00814;Name=DUF4887 domain-containing protein;locus_tag=GCA000560365_00814;product=DUF4887 domain-containing protein;Parent=GCA000560365_00814_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000070826.1,SO:0001217,UniParc:UPI00003B1509,UniRef:UniRef100_Q2G034,UniRef:UniRef50_Q2G034,UniRef:UniRef90_Q2G034
contig_1	Infernal	gene	859698	859956	.	+	.	ID=GCA000560365_00815_gene;locus_tag=GCA000560365_00815;gene=S35
contig_1	Infernal	ncRNA	859698	859956	5.1e-21	+	.	ID=GCA000560365_00815;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000560365_00815;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000560365_00815_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	860246	861259	.	+	.	ID=GCA000560365_00816_gene;locus_tag=GCA000560365_00816;gene=deoR
contig_1	Pyrodigal	CDS	860246	861259	.	+	0	ID=GCA000560365_00816;Name=Central glycolytic genes regulator;locus_tag=GCA000560365_00816;product=Central glycolytic genes regulator;gene=deoR;Parent=GCA000560365_00816_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2390,COG:K,RefSeq:WP_000654030.1,SO:0001217,UniParc:UPI00000D76A7,UniRef:UniRef100_Q2G033,UniRef:UniRef50_A0A7V7VIG1,UniRef:UniRef90_A0A7Z1N475
contig_1	Pyrodigal	gene	861312	862322	.	+	.	ID=GCA000560365_00817_gene;locus_tag=GCA000560365_00817;gene=gap
contig_1	Pyrodigal	CDS	861312	862322	.	+	0	ID=GCA000560365_00817;Name=type I glyceraldehyde-3-phosphate dehydrogenase;locus_tag=GCA000560365_00817;product=type I glyceraldehyde-3-phosphate dehydrogenase;Dbxref=GO:0004365,GO:0005737,GO:0006006,GO:0006096,GO:0016620,GO:0050661,GO:0051287;gene=gap;Parent=GCA000560365_00817_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0057,COG:G,RefSeq:WP_000279414.1,SO:0001217,UniParc:UPI000005229B,UniRef:UniRef100_Q5HHP5,UniRef:UniRef50_O52631,UniRef:UniRef90_Q5HQV4;ec_number=1.2.1.12
contig_1	Pyrodigal	gene	862461	863651	.	+	.	ID=GCA000560365_00818_gene;locus_tag=GCA000560365_00818;gene=pgk
contig_1	Pyrodigal	CDS	862461	863651	.	+	0	ID=GCA000560365_00818;Name=Phosphoglycerate kinase;locus_tag=GCA000560365_00818;product=Phosphoglycerate kinase;Dbxref=GO:0004618,GO:0005524,GO:0005829,GO:0006094,GO:0006096,GO:0043531;gene=pgk;Parent=GCA000560365_00818_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0126,COG:G,KEGG:K00927,RefSeq:WP_001074749.1,SO:0001217,UniParc:UPI0000054769,UniRef:UniRef100_Q2G031,UniRef:UniRef50_Q8Y4I2,UniRef:UniRef90_Q2G031;ec_number=2.7.2.3
contig_1	Pyrodigal	gene	863773	864534	.	+	.	ID=GCA000560365_00819_gene;locus_tag=GCA000560365_00819;gene=tpiA
contig_1	Pyrodigal	CDS	863773	864534	.	+	0	ID=GCA000560365_00819;Name=triose-phosphate isomerase;locus_tag=GCA000560365_00819;product=triose-phosphate isomerase;Dbxref=GO:0004807,GO:0005829,GO:0006094,GO:0006096,GO:0019563,GO:0046166;gene=tpiA;Parent=GCA000560365_00819_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0149,COG:G,KEGG:K01803,RefSeq:WP_001260089.1,SO:0001217,UniParc:UPI000013722C,UniRef:UniRef100_Q2FIL9,UniRef:UniRef50_Q5XD48,UniRef:UniRef90_Q2G030;ec_number=5.3.1.1
contig_1	Pyrodigal	gene	864537	866054	.	+	.	ID=GCA000560365_00820_gene;locus_tag=GCA000560365_00820;gene=gpmI
contig_1	Pyrodigal	CDS	864537	866054	.	+	0	ID=GCA000560365_00820;Name=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;locus_tag=GCA000560365_00820;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;Dbxref=GO:0005829,GO:0006007,GO:0006096,GO:0030145,GO:0046537;gene=gpmI;Parent=GCA000560365_00820_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0696,COG:G,KEGG:K15633,RefSeq:WP_001085505.1,SO:0001217,UniParc:UPI0000054765,UniRef:UniRef100_Q5HHP2,UniRef:UniRef50_P64269,UniRef:UniRef90_P64269;ec_number=5.4.2.12
contig_1	Pyrodigal	gene	866184	867488	.	+	.	ID=GCA000560365_00821_gene;locus_tag=GCA000560365_00821;gene=eno
contig_1	Pyrodigal	CDS	866184	867488	.	+	0	ID=GCA000560365_00821;Name=phosphopyruvate hydratase;locus_tag=GCA000560365_00821;product=phosphopyruvate hydratase;Dbxref=GO:0000015,GO:0000287,GO:0004634,GO:0005576,GO:0006096,GO:0009986;gene=eno;Parent=GCA000560365_00821_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0148,COG:G,KEGG:K01689,RefSeq:WP_001121760.1,SO:0001217,UniParc:UPI0000054764,UniRef:UniRef100_Q2G028,UniRef:UniRef50_Q97QS2,UniRef:UniRef90_O69174;ec_number=4.2.1.11
contig_1	Pyrodigal	gene	867828	868286	.	+	.	ID=GCA000560365_00822_gene;locus_tag=GCA000560365_00822
contig_1	Pyrodigal	CDS	867828	868286	.	+	0	ID=GCA000560365_00822;Name=DUF2127 domain-containing protein;locus_tag=GCA000560365_00822;product=DUF2127 domain-containing protein;Parent=GCA000560365_00822_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000785252.1,SO:0001217,UniParc:UPI00000D770D,UniRef:UniRef100_Q2G027,UniRef:UniRef50_Q2G027,UniRef:UniRef90_Q2G027
contig_1	Pyrodigal	gene	868353	868586	.	+	.	ID=GCA000560365_00823_gene;locus_tag=GCA000560365_00823;gene=secG
contig_1	Pyrodigal	CDS	868353	868586	.	+	0	ID=GCA000560365_00823;Name=preprotein translocase subunit SecG;locus_tag=GCA000560365_00823;product=preprotein translocase subunit SecG;Dbxref=GO:0005886,GO:0009306,GO:0015136,GO:0015450,GO:0015739,GO:0016020,GO:0043952,GO:0065002;gene=secG;Parent=GCA000560365_00823_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1314,COG:U,RefSeq:WP_000556760.1,SO:0001217,UniParc:UPI00000D77CD,UniRef:UniRef100_Q2G026,UniRef:UniRef50_Q2G026,UniRef:UniRef90_Q2G026
contig_1	Pyrodigal	gene	868702	869442	.	+	.	ID=GCA000560365_00824_gene;locus_tag=GCA000560365_00824;gene=yvaK
contig_1	Pyrodigal	CDS	868702	869442	.	+	0	ID=GCA000560365_00824;Name=Carboxylesterase%2C putative;locus_tag=GCA000560365_00824;product=Carboxylesterase%2C putative;gene=yvaK;Parent=GCA000560365_00824_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1647,COG:Q,RefSeq:WP_001165952.1,SO:0001217,UniParc:UPI0000054761,UniRef:UniRef100_Q2G025,UniRef:UniRef50_Q2G025,UniRef:UniRef90_Q2G025
contig_1	Pyrodigal	gene	869476	871848	.	+	.	ID=GCA000560365_00825_gene;locus_tag=GCA000560365_00825;gene=rnr
contig_1	Pyrodigal	CDS	869476	871848	.	+	0	ID=GCA000560365_00825;Name=ribonuclease R;locus_tag=GCA000560365_00825;product=ribonuclease R;Dbxref=GO:0003723,GO:0004518;gene=rnr;Parent=GCA000560365_00825_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0557,COG:K,KEGG:K12573,RefSeq:WP_001050064.1,SO:0001217,UniParc:UPI0000054760,UniRef:UniRef100_Q2G024,UniRef:UniRef50_O32231,UniRef:UniRef90_A0A7Z7QY34;ec_number=3.1.13.1
contig_1	Pyrodigal	gene	871870	872334	.	+	.	ID=GCA000560365_00826_gene;locus_tag=GCA000560365_00826;gene=smpB
contig_1	Pyrodigal	CDS	871870	872334	.	+	0	ID=GCA000560365_00826;Name=SsrA-binding protein SmpB;locus_tag=GCA000560365_00826;product=SsrA-binding protein SmpB;Dbxref=GO:0003723,GO:0005829,GO:0070929;gene=smpB;Parent=GCA000560365_00826_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0691,COG:O,KEGG:K03664,RefSeq:WP_001085185.1,SO:0001217,UniParc:UPI000005475F,UniRef:UniRef100_Q2G023,UniRef:UniRef50_C4L5G5,UniRef:UniRef90_P66862
contig_1	Aragorn	gene	872425	872783	.	+	.	ID=GCA000560365_00827_gene;locus_tag=GCA000560365_00827;gene=ssrA
contig_1	Aragorn	tmRNA	872425	872783	.	+	.	ID=GCA000560365_00827;Name=transfer-messenger RNA%2C SsrA;locus_tag=GCA000560365_00827;gene=ssrA;product=transfer-messenger RNA%2C SsrA;tag_peptide=872518..872553;Parent=GCA000560365_00827_gene;inference=profile:aragorn:1.2;Note=SO:0000584
contig_1	Pyrodigal	gene	873656	873979	.	-	.	ID=GCA000560365_00828_gene;locus_tag=GCA000560365_00828
contig_1	Pyrodigal	CDS	873656	873979	.	-	0	ID=GCA000560365_00828;Name=Phage protein;locus_tag=GCA000560365_00828;product=Phage protein;Parent=GCA000560365_00828_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001058299.1,SO:0001217,UniParc:UPI000005475E,UniRef:UniRef100_Q2G021,UniRef:UniRef50_A0A6G4N846,UniRef:UniRef90_A0A6G4N846
contig_1	Pyrodigal	gene	874333	875061	.	-	.	ID=GCA000560365_00829_gene;locus_tag=GCA000560365_00829
contig_1	Pyrodigal	CDS	874333	875061	.	-	0	ID=GCA000560365_00829;Name=DUF5067 domain-containing protein;locus_tag=GCA000560365_00829;product=DUF5067 domain-containing protein;Parent=GCA000560365_00829_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000757406.1,SO:0001217,UniParc:UPI000005475B,UniRef:UniRef100_Q2G019,UniRef:UniRef50_Q2G019,UniRef:UniRef90_Q2G019
contig_1	Pyrodigal	gene	875660	876103	.	+	.	ID=GCA000560365_00830_gene;locus_tag=GCA000560365_00830
contig_1	Pyrodigal	CDS	875660	876103	.	+	0	ID=GCA000560365_00830;Name=SMODS-associated and fused to various effectors domain-containing protein;locus_tag=GCA000560365_00830;product=SMODS-associated and fused to various effectors domain-containing protein;Parent=GCA000560365_00830_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000696BE5,UniRef:UniRef100_Q2G017,UniRef:UniRef50_K9AW58,UniRef:UniRef90_Q2G017
contig_1	Pyrodigal	gene	876320	876850	.	+	.	ID=GCA000560365_00831_gene;locus_tag=GCA000560365_00831;gene=yhbS
contig_1	Pyrodigal	CDS	876320	876850	.	+	0	ID=GCA000560365_00831;Name=N-acetyltransferase domain-containing protein;locus_tag=GCA000560365_00831;product=N-acetyltransferase domain-containing protein;gene=yhbS;Parent=GCA000560365_00831_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3153,COG:R,RefSeq:WP_001167175.1,SO:0001217,UniParc:UPI0000054759,UniRef:UniRef100_Q2G016,UniRef:UniRef50_Q2G016,UniRef:UniRef90_Q2G016
contig_1	Pyrodigal	gene	877113	879914	.	+	.	ID=GCA000560365_00832_gene;locus_tag=GCA000560365_00832;gene=clfA
contig_1	Pyrodigal	CDS	877113	879914	.	+	0	ID=GCA000560365_00832;Name=Clumping factor A%2C fibrinogen-binding protein;locus_tag=GCA000560365_00832;product=Clumping factor A%2C fibrinogen-binding protein;Dbxref=GO:0005576,GO:0007155;gene=clfA;Parent=GCA000560365_00832_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_031808141.1,SO:0001217,UniParc:UPI00044A21A6,UniRef:UniRef100_UPI00044A21A6,UniRef:UniRef50_Q2G015,UniRef:UniRef90_Q2G015,VFDB:VFC0001,VFDB:VFG001289
contig_1	Pyrodigal	gene	880135	881661	.	+	.	ID=GCA000560365_00833_gene;locus_tag=GCA000560365_00833;gene=vwb
contig_1	Pyrodigal	CDS	880135	881661	.	+	0	ID=GCA000560365_00833;Name=secreted von Willebrand factor-binding protein precursor;locus_tag=GCA000560365_00833;product=secreted von Willebrand factor-binding protein precursor;gene=vwb;Parent=GCA000560365_00833_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000791729.1,SO:0001217,UniParc:UPI00000B2DBF,UniRef:UniRef100_Q93SM9,UniRef:UniRef50_E2FZT0,UniRef:UniRef90_Q93SM9,VFDB:VFC0251,VFDB:VFG002418
contig_1	Pyrodigal	gene	882012	883034	.	+	.	ID=GCA000560365_00834_gene;locus_tag=GCA000560365_00834;gene=emp
contig_1	Pyrodigal	CDS	882012	883034	.	+	0	ID=GCA000560365_00834;Name=extracellular matrix protein-binding adhesin Emp;locus_tag=GCA000560365_00834;product=extracellular matrix protein-binding adhesin Emp;Dbxref=GO:0009986;gene=emp;Parent=GCA000560365_00834_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000727726,BlastRules:WP_000728056,BlastRules:WP_031788349,BlastRules:WP_047447833,RefSeq:WP_000728056.1,SO:0001217,UniParc:UPI00000B9920,UniRef:UniRef100_Q2G012,UniRef:UniRef50_P0C6P1,UniRef:UniRef90_P0C6P1
contig_1	Pyrodigal	gene	883369	883839	.	+	.	ID=GCA000560365_00835_gene;locus_tag=GCA000560365_00835
contig_1	Pyrodigal	CDS	883369	883839	.	+	0	ID=GCA000560365_00835;Name=Extracellular matrix and plasma binding protein;locus_tag=GCA000560365_00835;product=Extracellular matrix and plasma binding protein;Parent=GCA000560365_00835_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000824472.1,SO:0001217,UniParc:UPI0000054754,UniRef:UniRef100_Q2G011,UniRef:UniRef50_Q2G011,UniRef:UniRef90_Q2G011
contig_1	Pyrodigal	gene	884180	884866	.	+	.	ID=GCA000560365_00836_gene;locus_tag=GCA000560365_00836;gene=nuc
contig_1	Pyrodigal	CDS	884180	884866	.	+	0	ID=GCA000560365_00836;Name=Thermonuclease;locus_tag=GCA000560365_00836;product=Thermonuclease;Dbxref=GO:0003676,GO:0005576,GO:0016894,GO:0046872;gene=nuc;Parent=GCA000560365_00836_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1525,COG:L,RefSeq:WP_001548082.1,SO:0001217,UniParc:UPI00004B5B68,UniRef:UniRef100_Q5HHM4,UniRef:UniRef50_P00644,UniRef:UniRef90_P00644;ec_number=3.1.31.1
contig_1	Pyrodigal	gene	885223	885423	.	+	.	ID=GCA000560365_00837_gene;locus_tag=GCA000560365_00837;gene=cspA
contig_1	Pyrodigal	CDS	885223	885423	.	+	0	ID=GCA000560365_00837;Name=Cold shock protein CspA;locus_tag=GCA000560365_00837;product=Cold shock protein CspA;gene=cspA;Parent=GCA000560365_00837_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1278,COG:K,KEGG:K03704,RefSeq:WP_001059082.1,SO:0001217,UniParc:UPI0000054751,UniRef:UniRef100_Q2G009,UniRef:UniRef50_A0A2X3Z2C5,UniRef:UniRef90_Q2G009
contig_1	Pyrodigal	gene	885919	886137	.	-	.	ID=GCA000560365_00838_gene;locus_tag=GCA000560365_00838
contig_1	Pyrodigal	CDS	885919	886137	.	-	0	ID=GCA000560365_00838;Name=hypothetical protein;locus_tag=GCA000560365_00838;product=hypothetical protein;Parent=GCA000560365_00838_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000005886.1,SO:0001217,UniParc:UPI0000054750,UniRef:UniRef100_Q2G008,UniRef:UniRef50_Q2G008,UniRef:UniRef90_Q2G008
contig_1	Pyrodigal	gene	886199	886483	.	-	.	ID=GCA000560365_00839_gene;locus_tag=GCA000560365_00839
contig_1	Pyrodigal	CDS	886199	886483	.	-	0	ID=GCA000560365_00839;Name=Phage protein;locus_tag=GCA000560365_00839;product=Phage protein;Parent=GCA000560365_00839_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001004395.1,SO:0001217,UniParc:UPI00004B5B69,UniRef:UniRef100_Q2G007,UniRef:UniRef50_Q2G007,UniRef:UniRef90_Q2G007
contig_1	Pyrodigal	gene	886571	887140	.	-	.	ID=GCA000560365_00840_gene;locus_tag=GCA000560365_00840;gene=lnsA
contig_1	Pyrodigal	CDS	886571	887140	.	-	0	ID=GCA000560365_00840;Name=lipoprotein N-acylation protein LnsA;locus_tag=GCA000560365_00840;product=lipoprotein N-acylation protein LnsA;gene=lnsA;Parent=GCA000560365_00840_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3863,COG:S,KEGG:K27957,RefSeq:WP_001106654.1,SO:0001217,UniParc:UPI00000D7840,UniRef:UniRef100_Q2G006,UniRef:UniRef50_A0A1J3ZZ65,UniRef:UniRef90_Q2G006;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	887328	887516	.	-	.	ID=GCA000560365_00841_gene;locus_tag=GCA000560365_00841;gene=tsaT
contig_1	Pyrodigal	CDS	887328	887516	.	-	0	ID=GCA000560365_00841;Name=type II toxin-antitoxin system toxin TsaT;locus_tag=GCA000560365_00841;product=type II toxin-antitoxin system toxin TsaT;Dbxref=GO:0090729,GO:0110001;gene=tsaT;Parent=GCA000560365_00841_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000052078.1,SO:0001217,UniParc:UPI000069AA81,UniRef:UniRef100_Q2G005,UniRef:UniRef50_Q2G005,UniRef:UniRef90_Q2G005
contig_1	Pyrodigal	gene	887545	887805	.	-	.	ID=GCA000560365_00842_gene;locus_tag=GCA000560365_00842;gene=tsaA
contig_1	Pyrodigal	CDS	887545	887805	.	-	0	ID=GCA000560365_00842;Name=type II toxin-antitoxin system antitoxin TsaA;locus_tag=GCA000560365_00842;product=type II toxin-antitoxin system antitoxin TsaA;Dbxref=GO:0110001;gene=tsaA;Parent=GCA000560365_00842_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001059690.1,SO:0001217,UniParc:UPI00000D774E,UniRef:UniRef100_Q2G004,UniRef:UniRef50_Q2G004,UniRef:UniRef90_Q2G004
contig_1	Pyrodigal	gene	888146	888349	.	+	.	ID=GCA000560365_00843_gene;locus_tag=GCA000560365_00843;gene=yozE
contig_1	Pyrodigal	CDS	888146	888349	.	+	0	ID=GCA000560365_00843;Name=YozE SAM-like domain-containing protein;locus_tag=GCA000560365_00843;product=YozE SAM-like domain-containing protein;gene=yozE;Parent=GCA000560365_00843_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000145163.1,SO:0001217,UniParc:UPI000005474D,UniRef:UniRef100_Q2G003,UniRef:UniRef50_Q2G003,UniRef:UniRef90_Q2G003
contig_1	Pyrodigal	gene	888346	888582	.	-	.	ID=GCA000560365_00844_gene;locus_tag=GCA000560365_00844
contig_1	Pyrodigal	CDS	888346	888582	.	-	0	ID=GCA000560365_00844;Name=CobW/HypB/UreG nucleotide-binding domain-containing protein;locus_tag=GCA000560365_00844;product=CobW/HypB/UreG nucleotide-binding domain-containing protein;Parent=GCA000560365_00844_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000368687.1,SO:0001217,UniParc:UPI00000D9D21,UniRef:UniRef100_Q2G1T2,UniRef:UniRef50_A0A9X4L8V2,UniRef:UniRef90_Q2G1T2
contig_1	Pyrodigal	gene	888807	889388	.	+	.	ID=GCA000560365_00845_gene;locus_tag=GCA000560365_00845;gene=phoE
contig_1	Pyrodigal	CDS	888807	889388	.	+	0	ID=GCA000560365_00845;Name=Phosphoglycerate mutase;locus_tag=GCA000560365_00845;product=Phosphoglycerate mutase;gene=phoE;Parent=GCA000560365_00845_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0406,COG:G,RefSeq:WP_001140686.1,SO:0001217,UniParc:UPI00016991F1,UniRef:UniRef100_A0A0E8GAD0,UniRef:UniRef50_A0A0E8GAD0,UniRef:UniRef90_A0A0E8GAD0
contig_1	Pyrodigal	gene	889461	890078	.	-	.	ID=GCA000560365_00846_gene;locus_tag=GCA000560365_00846;gene=argO
contig_1	Pyrodigal	CDS	889461	890078	.	-	0	ID=GCA000560365_00846;Name=Amino acid transporter;locus_tag=GCA000560365_00846;product=Amino acid transporter;gene=argO;Parent=GCA000560365_00846_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1279,COG:E,KEGG:K06895,RefSeq:WP_000255561.1,SO:0001217,UniParc:UPI000005474A,UniRef:UniRef100_Q2G1T0,UniRef:UniRef50_Q2G1T0,UniRef:UniRef90_Q2G1T0
contig_1	Pyrodigal	gene	890233	890727	.	-	.	ID=GCA000560365_00847_gene;locus_tag=GCA000560365_00847
contig_1	Pyrodigal	CDS	890233	890727	.	-	0	ID=GCA000560365_00847;Name=N-acetyltransferase domain-containing protein;locus_tag=GCA000560365_00847;product=N-acetyltransferase domain-containing protein;Parent=GCA000560365_00847_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000569884.1,SO:0001217,UniParc:UPI0000054749,UniRef:UniRef100_Q2G1T4,UniRef:UniRef50_Q2G1T4,UniRef:UniRef90_Q2G1T4
contig_1	Pyrodigal	gene	891126	891548	.	-	.	ID=GCA000560365_00848_gene;locus_tag=GCA000560365_00848;gene=osmC
contig_1	Pyrodigal	CDS	891126	891548	.	-	0	ID=GCA000560365_00848;Name=Organic hydroperoxide resistance protein-like;locus_tag=GCA000560365_00848;product=Organic hydroperoxide resistance protein-like;Dbxref=GO:0006979;gene=osmC;Parent=GCA000560365_00848_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1764,COG:V,KEGG:K04063,RefSeq:WP_000974460.1,SO:0001217,UniParc:UPI0000054748,UniRef:UniRef100_Q2G1T3,UniRef:UniRef50_Q49W40,UniRef:UniRef90_Q2G1T3;ec_number=1.11.1.28
contig_1	Pyrodigal	gene	891696	892412	.	+	.	ID=GCA000560365_00849_gene;locus_tag=GCA000560365_00849;gene=aroD
contig_1	Pyrodigal	CDS	891696	892412	.	+	0	ID=GCA000560365_00849;Name=3-dehydroquinate dehydratase;locus_tag=GCA000560365_00849;product=3-dehydroquinate dehydratase;Dbxref=GO:0003855,GO:0008652,GO:0009073,GO:0009423,GO:0046279;gene=aroD;Parent=GCA000560365_00849_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0710,COG:E,RefSeq:WP_000150017.1,SO:0001217,UniParc:UPI0000054747,UniRef:UniRef100_Q2G002,UniRef:UniRef50_Q6GII7,UniRef:UniRef90_Q6GII7;ec_number=4.2.1.10
contig_1	Pyrodigal	gene	892495	893034	.	+	.	ID=GCA000560365_00850_gene;locus_tag=GCA000560365_00850;gene=nfnB
contig_1	Pyrodigal	CDS	892495	893034	.	+	0	ID=GCA000560365_00850;Name=Nitroreductase domain-containing protein;locus_tag=GCA000560365_00850;product=Nitroreductase domain-containing protein;gene=nfnB;Parent=GCA000560365_00850_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0778,RefSeq:WP_000422909.1,SO:0001217,UniParc:UPI00004B5B6D,UniRef:UniRef100_A0A0E7NNB9,UniRef:UniRef50_Q2G001,UniRef:UniRef90_Q2G001
contig_1	Pyrodigal	gene	893184	893504	.	-	.	ID=GCA000560365_00851_gene;locus_tag=GCA000560365_00851
contig_1	Pyrodigal	CDS	893184	893504	.	-	0	ID=GCA000560365_00851;Name=Thioredoxin%2C putative;locus_tag=GCA000560365_00851;product=Thioredoxin%2C putative;Parent=GCA000560365_00851_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001190695.1,SO:0001217,UniParc:UPI0000054745,UniRef:UniRef100_Q2G000,UniRef:UniRef50_A0A0U1MGB8,UniRef:UniRef90_Q2G000
contig_1	Pyrodigal	gene	893648	894004	.	+	.	ID=GCA000560365_00852_gene;locus_tag=GCA000560365_00852;gene=arsC
contig_1	Pyrodigal	CDS	893648	894004	.	+	0	ID=GCA000560365_00852;Name=Arsenate reductase;locus_tag=GCA000560365_00852;product=Arsenate reductase;gene=arsC;Parent=GCA000560365_00852_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1393,COG:P,RefSeq:WP_000589549.1,SO:0001217,UniParc:UPI0000054744,UniRef:UniRef100_Q2FZZ9,UniRef:UniRef50_A0A1D4Q7A2,UniRef:UniRef90_A0AAE8TJ65
contig_1	Pyrodigal	gene	894162	894542	.	+	.	ID=GCA000560365_00853_gene;locus_tag=GCA000560365_00853;gene=gcvH
contig_1	Pyrodigal	CDS	894162	894542	.	+	0	ID=GCA000560365_00853;Name=glycine cleavage system protein GcvH;locus_tag=GCA000560365_00853;product=glycine cleavage system protein GcvH;Dbxref=GO:0005829,GO:0005960,GO:0019464;gene=gcvH;Parent=GCA000560365_00853_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0509,COG:E,RefSeq:WP_000290485.1,SO:0001217,UniParc:UPI00004B5B6E,UniRef:UniRef100_Q2FZZ8,UniRef:UniRef50_P64213,UniRef:UniRef90_P64213
contig_1	Pyrodigal	gene	894606	894719	.	+	.	ID=GCA000560365_00854_gene;locus_tag=GCA000560365_00854
contig_1	Pyrodigal	CDS	894606	894719	.	+	0	ID=GCA000560365_00854;Name=hypothetical protein;locus_tag=GCA000560365_00854;product=hypothetical protein;Parent=GCA000560365_00854_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000660172.1,SO:0001217,UniParc:UPI0000054742,UniRef:UniRef100_Q2FZZ7,UniRef:UniRef50_A0AA40JLX0,UniRef:UniRef90_A0AA40JLX0
contig_1	Pyrodigal	gene	894721	895599	.	+	.	ID=GCA000560365_00855_gene;locus_tag=GCA000560365_00855
contig_1	Pyrodigal	CDS	894721	895599	.	+	0	ID=GCA000560365_00855;Name=DUF1963 domain-containing protein;locus_tag=GCA000560365_00855;product=DUF1963 domain-containing protein;Parent=GCA000560365_00855_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000932219.1,SO:0001217,UniParc:UPI0000696BE7,UniRef:UniRef100_A0A5A8VL07,UniRef:UniRef50_Q2FZZ6,UniRef:UniRef90_Q2FZZ6
contig_1	Infernal	gene	895642	895908	.	+	.	ID=GCA000560365_00856_gene;locus_tag=GCA000560365_00856;gene=S35
contig_1	Infernal	ncRNA	895642	895908	4.9e-36	+	.	ID=GCA000560365_00856;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000560365_00856;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000560365_00856_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	896338	896727	.	+	.	ID=GCA000560365_00857_gene;locus_tag=GCA000560365_00857;gene=rnmV
contig_1	Pyrodigal	CDS	896338	896727	.	+	0	ID=GCA000560365_00857;Name=Toprim domain-containing protein;locus_tag=GCA000560365_00857;product=Toprim domain-containing protein;gene=rnmV;Parent=GCA000560365_00857_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1658,COG:J,SO:0001217,UniParc:UPI0001528018,UniRef:UniRef100_Q2FZZ4,UniRef:UniRef50_A0A1E5LDX5,UniRef:UniRef90_Q2FZZ4
contig_1	Pyrodigal	gene	896720	897016	.	+	.	ID=GCA000560365_00858_gene;locus_tag=GCA000560365_00858
contig_1	Pyrodigal	CDS	896720	897016	.	+	0	ID=GCA000560365_00858;Name=Thioredoxin domain-containing protein;locus_tag=GCA000560365_00858;product=Thioredoxin domain-containing protein;Parent=GCA000560365_00858_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001065801.1,SO:0001217,UniParc:UPI000005473F,UniRef:UniRef100_Q2FZZ3,UniRef:UniRef50_Q2FZZ3,UniRef:UniRef90_Q2FZZ3
contig_1	Infernal	regulatory_region	897074	897177	3.5e-15	+	.	ID=KMHODOBJJH_175;Name=SAM riboswitch aptamer (S box leader);product=SAM riboswitch aptamer (S box leader);Dbxref=RFAM:RF00162;inference=profile:Rfam:RF00162;Note=SO:0000140;regulatory_class=attenuator
contig_1	Pyrodigal	gene	897266	898291	.	+	.	ID=GCA000560365_00859_gene;locus_tag=GCA000560365_00859;gene=metN2
contig_1	Pyrodigal	CDS	897266	898291	.	+	0	ID=GCA000560365_00859;Name=Methionine import ATP-binding protein MetN 2;locus_tag=GCA000560365_00859;product=Methionine import ATP-binding protein MetN 2;Dbxref=GO:0005524,GO:0005886,GO:0016887,GO:0033232;gene=metN2;Parent=GCA000560365_00859_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1135,COG:E,RefSeq:WP_000571218.1,SO:0001217,UniParc:UPI00000D9D28,UniRef:UniRef100_Q2FZZ2,UniRef:UniRef50_Q99VG8,UniRef:UniRef90_Q99VG8;ec_number=7.4.2.11
contig_1	Pyrodigal	gene	898284	898979	.	+	.	ID=GCA000560365_00860_gene;locus_tag=GCA000560365_00860;gene=metP
contig_1	Pyrodigal	CDS	898284	898979	.	+	0	ID=GCA000560365_00860;Name=ABC transmembrane type-1 domain-containing protein;locus_tag=GCA000560365_00860;product=ABC transmembrane type-1 domain-containing protein;gene=metP;Parent=GCA000560365_00860_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2011,COG:E,RefSeq:WP_000520233.1,SO:0001217,UniParc:UPI000005473C,UniRef:UniRef100_Q2FZZ1,UniRef:UniRef50_O32168,UniRef:UniRef90_Q2FZZ1
contig_1	Pyrodigal	gene	898997	899818	.	+	.	ID=GCA000560365_00861_gene;locus_tag=GCA000560365_00861;gene=nlpA
contig_1	Pyrodigal	CDS	898997	899818	.	+	0	ID=GCA000560365_00861;Name=Lipoprotein;locus_tag=GCA000560365_00861;product=Lipoprotein;gene=nlpA;Parent=GCA000560365_00861_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1464,COG:P,KEGG:K02073,RefSeq:WP_000732326.1,SO:0001217,UniParc:UPI00000D9D29,UniRef:UniRef100_Q2FZZ0,UniRef:UniRef50_A0A380G8D6,UniRef:UniRef90_A0A0U1MGY2
contig_1	Pyrodigal	gene	899961	901181	.	-	.	ID=GCA000560365_00862_gene;locus_tag=GCA000560365_00862
contig_1	Pyrodigal	CDS	899961	901181	.	-	0	ID=GCA000560365_00862;Name=Int protein;locus_tag=GCA000560365_00862;product=Int protein;Parent=GCA000560365_00862_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000266158.1,SO:0001217,UniParc:UPI0000696BE8,UniRef:UniRef100_K7ZQ59,UniRef:UniRef50_A0A0C6DXB6,UniRef:UniRef90_A0A0C6DXB6
contig_1	Pyrodigal	gene	901269	901997	.	-	.	ID=GCA000560365_00863_gene;locus_tag=GCA000560365_00863;gene=sek
contig_1	Pyrodigal	CDS	901269	901997	.	-	0	ID=GCA000560365_00863;Name=staphylococcal enterotoxin type K;locus_tag=GCA000560365_00863;product=staphylococcal enterotoxin type K;gene=sek;Parent=GCA000560365_00863_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000733775,KEGG:K11040,NCBIProtein:AAW36439.1,RefSeq:WP_000734020.1,SO:0001217,UniParc:UPI0000696BE9,UniRef:UniRef100_A0A1S5YK26,UniRef:UniRef50_O54476,UniRef:UniRef90_O54476
contig_1	Pyrodigal	gene	902021	902749	.	-	.	ID=GCA000560365_00864_gene;locus_tag=GCA000560365_00864;gene=seq
contig_1	Pyrodigal	CDS	902021	902749	.	-	0	ID=GCA000560365_00864;Name=staphylococcal enterotoxin type Q;locus_tag=GCA000560365_00864;product=staphylococcal enterotoxin type Q;gene=seq;Parent=GCA000560365_00864_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001033317,KEGG:K11040,NCBIProtein:EYN56163.1,RefSeq:WP_001033321.1,SO:0001217,UniParc:UPI0000696BEA,UniRef:UniRef100_K7ZK09,UniRef:UniRef50_Q9F0L7,UniRef:UniRef90_Q8VLW7
contig_1	Pyrodigal	gene	902766	903224	.	-	.	ID=GCA000560365_00865_gene;locus_tag=GCA000560365_00865
contig_1	Pyrodigal	CDS	902766	903224	.	-	0	ID=GCA000560365_00865;Name=ImmA/IrrE family metallo-endopeptidase;locus_tag=GCA000560365_00865;product=ImmA/IrrE family metallo-endopeptidase;Parent=GCA000560365_00865_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000281658.1,SO:0001217,UniParc:UPI0000696BEB,UniRef:UniRef100_K7ZRW0,UniRef:UniRef50_M9NUH9,UniRef:UniRef90_Q93CC8
contig_1	Pyrodigal	gene	903236	903568	.	-	.	ID=GCA000560365_00866_gene;locus_tag=GCA000560365_00866
contig_1	Pyrodigal	CDS	903236	903568	.	-	0	ID=GCA000560365_00866;Name=Transcriptional regulator;locus_tag=GCA000560365_00866;product=Transcriptional regulator;Parent=GCA000560365_00866_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001260004.1,SO:0001217,UniParc:UPI00000B1396,UniRef:UniRef100_A0A976SFI2,UniRef:UniRef50_A0A3E0IKX3,UniRef:UniRef90_A0A976SFI2
contig_1	Pyrodigal	gene	903761	904024	.	+	.	ID=GCA000560365_00867_gene;locus_tag=GCA000560365_00867
contig_1	Pyrodigal	CDS	903761	904024	.	+	0	ID=GCA000560365_00867;Name=HTH cro/C1-type domain-containing protein;locus_tag=GCA000560365_00867;product=HTH cro/C1-type domain-containing protein;Parent=GCA000560365_00867_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000243849.1,SO:0001217,UniParc:UPI00015FD72F,UniRef:UniRef100_A0A2C9TN82,UniRef:UniRef50_K7ZQ60,UniRef:UniRef90_K7ZQ60
contig_1	Pyrodigal	gene	904017	904289	.	+	.	ID=GCA000560365_00868_gene;locus_tag=GCA000560365_00868
contig_1	Pyrodigal	CDS	904017	904289	.	+	0	ID=GCA000560365_00868;Name=Excisionase;locus_tag=GCA000560365_00868;product=Excisionase;Parent=GCA000560365_00868_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000091732.1,SO:0001217,UniParc:UPI0000696BED,UniRef:UniRef100_A0A1S5ZSH4,UniRef:UniRef50_X5IY47,UniRef:UniRef90_K7ZN19
contig_1	Pyrodigal	gene	904301	904474	.	+	.	ID=GCA000560365_00869_gene;locus_tag=GCA000560365_00869
contig_1	Pyrodigal	CDS	904301	904474	.	+	0	ID=GCA000560365_00869;Name=Pathogenicity island protein;locus_tag=GCA000560365_00869;product=Pathogenicity island protein;Parent=GCA000560365_00869_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000784892.1,SO:0001217,UniParc:UPI00003B13D3,UniRef:UniRef100_I2FJE6,UniRef:UniRef50_A0A0U1MQK6,UniRef:UniRef90_I2FJE6
contig_1	Pyrodigal	gene	904441	904644	.	+	.	ID=GCA000560365_00870_gene;locus_tag=GCA000560365_00870
contig_1	Pyrodigal	CDS	904441	904644	.	+	0	ID=GCA000560365_00870;Name=Pathogenicity island protein;locus_tag=GCA000560365_00870;product=Pathogenicity island protein;Parent=GCA000560365_00870_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001231376.1,SO:0001217,UniParc:UPI00005FE24C,UniRef:UniRef100_I2FJE7,UniRef:UniRef50_A0A0E1XAY4,UniRef:UniRef90_A0A0E1XAY4
contig_1	Pyrodigal	gene	904646	905029	.	+	.	ID=GCA000560365_00871_gene;locus_tag=GCA000560365_00871
contig_1	Pyrodigal	CDS	904646	905029	.	+	0	ID=GCA000560365_00871;Name=Pathogenicity island protein;locus_tag=GCA000560365_00871;product=Pathogenicity island protein;Parent=GCA000560365_00871_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000403840.1,SO:0001217,UniParc:UPI0000696BEE,UniRef:UniRef100_A0A1S6AYU9,UniRef:UniRef50_A0A0C6E6E7,UniRef:UniRef90_A0A0C6E6E7
contig_1	Pyrodigal	gene	905030	905278	.	+	.	ID=GCA000560365_00872_gene;locus_tag=GCA000560365_00872;gene=tscT
contig_1	Pyrodigal	CDS	905030	905278	.	+	0	ID=GCA000560365_00872;Name=type II toxin-antitoxin system toxin TscT;locus_tag=GCA000560365_00872;product=type II toxin-antitoxin system toxin TscT;Dbxref=GO:0090729,GO:0110001;gene=tscT;Parent=GCA000560365_00872_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001103959.1,SO:0001217,UniParc:UPI0000696BEF,UniRef:UniRef100_A0A1S5ZIK6,UniRef:UniRef50_I7GY15,UniRef:UniRef90_I7GY15
contig_1	Pyrodigal	gene	905370	907742	.	+	.	ID=GCA000560365_00873_gene;locus_tag=GCA000560365_00873
contig_1	Pyrodigal	CDS	905370	907742	.	+	0	ID=GCA000560365_00873;Name=Replication initiator;locus_tag=GCA000560365_00873;product=Replication initiator;Parent=GCA000560365_00873_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000985235.1,SO:0001217,UniParc:UPI0000696BF0,UniRef:UniRef100_A0A1S5ZIL8,UniRef:UniRef50_E2FZQ1,UniRef:UniRef90_K7ZQ69
contig_1	Pyrodigal	gene	908413	908757	.	+	.	ID=GCA000560365_00874_gene;locus_tag=GCA000560365_00874
contig_1	Pyrodigal	CDS	908413	908757	.	+	0	ID=GCA000560365_00874;Name=Pathogenicity island protein;locus_tag=GCA000560365_00874;product=Pathogenicity island protein;Parent=GCA000560365_00874_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001081424.1,SO:0001217,UniParc:UPI0000696BF1,UniRef:UniRef100_E2FZQ2,UniRef:UniRef50_Q4L4M4,UniRef:UniRef90_E2FYW8
contig_1	Pyrodigal	gene	908982	909188	.	+	.	ID=GCA000560365_00875_gene;locus_tag=GCA000560365_00875
contig_1	Pyrodigal	CDS	908982	909188	.	+	0	ID=GCA000560365_00875;Name=Pathogenicity island protein;locus_tag=GCA000560365_00875;product=Pathogenicity island protein;Parent=GCA000560365_00875_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000884055.1,SO:0001217,UniParc:UPI00000D9D0F,UniRef:UniRef100_A0AAE8Z1U2,UniRef:UniRef50_A0AAE8Z1U2,UniRef:UniRef90_A0AAE8Z1U2
contig_1	Pyrodigal	gene	909175	910233	.	+	.	ID=GCA000560365_00876_gene;locus_tag=GCA000560365_00876
contig_1	Pyrodigal	CDS	909175	910233	.	+	0	ID=GCA000560365_00876;Name=Phage capsid protein;locus_tag=GCA000560365_00876;product=Phage capsid protein;Parent=GCA000560365_00876_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000657538.1,SO:0001217,UniParc:UPI00015FD732,UniRef:UniRef100_A0A1S6C723,UniRef:UniRef50_E2FZQ5,UniRef:UniRef90_E2FZQ5
contig_1	Pyrodigal	gene	910417	910908	.	+	.	ID=GCA000560365_00877_gene;locus_tag=GCA000560365_00877
contig_1	Pyrodigal	CDS	910417	910908	.	+	0	ID=GCA000560365_00877;Name=Pathogenicity island protein;locus_tag=GCA000560365_00877;product=Pathogenicity island protein;Parent=GCA000560365_00877_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000253084.1,SO:0001217,UniParc:UPI00015FD733,UniRef:UniRef100_A0A1S6A0P9,UniRef:UniRef50_A0A0H2XEB8,UniRef:UniRef90_A0A0H2XEB8
contig_1	Pyrodigal	gene	911337	912305	.	+	.	ID=GCA000560365_00878_gene;locus_tag=GCA000560365_00878
contig_1	Pyrodigal	CDS	911337	912305	.	+	0	ID=GCA000560365_00878;Name=Abi family protein;locus_tag=GCA000560365_00878;product=Abi family protein;Parent=GCA000560365_00878_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000801979.1,SO:0001217,UniParc:UPI00000CAE79,UniRef:UniRef100_I7H3R7,UniRef:UniRef50_I7H3R7,UniRef:UniRef90_I7H3R7
contig_1	Pyrodigal	gene	912540	913094	.	-	.	ID=GCA000560365_00879_gene;locus_tag=GCA000560365_00879
contig_1	Pyrodigal	CDS	912540	913094	.	-	0	ID=GCA000560365_00879;Name=Ampicillin resistance protein;locus_tag=GCA000560365_00879;product=Ampicillin resistance protein;Parent=GCA000560365_00879_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001035618.1,SO:0001217,UniParc:UPI0000696BF4,UniRef:UniRef100_A0A2C9TN64,UniRef:UniRef50_M9NUJ8,UniRef:UniRef90_A0A2C9TN64
contig_1	Pyrodigal	gene	914128	914322	.	+	.	ID=GCA000560365_00880_gene;locus_tag=GCA000560365_00880;gene=yjbJ
contig_1	Pyrodigal	CDS	914128	914322	.	+	0	ID=GCA000560365_00880;Name=UPF0337 protein SAR0874;locus_tag=GCA000560365_00880;product=UPF0337 protein SAR0874;gene=yjbJ;Parent=GCA000560365_00880_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3237,COG:S,RefSeq:WP_000752917.1,SO:0001217,UniParc:UPI000005473A,UniRef:UniRef100_Q2FZY9,UniRef:UniRef50_Q2FZY9,UniRef:UniRef90_Q2FZY9
contig_1	Pyrodigal	gene	914555	915406	.	-	.	ID=GCA000560365_00881_gene;locus_tag=GCA000560365_00881;gene=popT
contig_1	Pyrodigal	CDS	914555	915406	.	-	0	ID=GCA000560365_00881;Name=Polyprenyl-phosphate transporter;locus_tag=GCA000560365_00881;product=Polyprenyl-phosphate transporter;Dbxref=GO:0005886,GO:0071555;gene=popT;Parent=GCA000560365_00881_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2035,COG:M,KEGG:K08974,RefSeq:WP_001183858.1,SO:0001217,UniParc:UPI0000054739,UniRef:UniRef100_Q2FZY8,UniRef:UniRef50_Q2FZY8,UniRef:UniRef90_Q2FZY8
contig_1	Pyrodigal	gene	915734	916495	.	+	.	ID=GCA000560365_00882_gene;locus_tag=GCA000560365_00882;gene=sufC
contig_1	Pyrodigal	CDS	915734	916495	.	+	0	ID=GCA000560365_00882;Name=Fe-S cluster assembly ATPase SufC;locus_tag=GCA000560365_00882;product=Fe-S cluster assembly ATPase SufC;Dbxref=GO:0005524,GO:0016226;gene=sufC;Parent=GCA000560365_00882_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0396,COG:O,RefSeq:WP_000168845.1,SO:0001217,UniParc:UPI0000054738,UniRef:UniRef100_Q2FZY7,UniRef:UniRef50_A0A1G4NXF9,UniRef:UniRef90_Q5HQQ2
contig_1	Pyrodigal	gene	916593	917900	.	+	.	ID=GCA000560365_00883_gene;locus_tag=GCA000560365_00883;gene=sufD
contig_1	Pyrodigal	CDS	916593	917900	.	+	0	ID=GCA000560365_00883;Name=Fe-S cluster assembly protein SufD;locus_tag=GCA000560365_00883;product=Fe-S cluster assembly protein SufD;Dbxref=GO:0016226;gene=sufD;Parent=GCA000560365_00883_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0719,COG:O,KEGG:K09015,RefSeq:WP_000205572.1,SO:0001217,UniParc:UPI000005228C,UniRef:UniRef100_Q2FZY6,UniRef:UniRef50_O32165,UniRef:UniRef90_Q2FZY6
contig_1	Pyrodigal	gene	918015	919256	.	+	.	ID=GCA000560365_00884_gene;locus_tag=GCA000560365_00884;gene=csd
contig_1	Pyrodigal	CDS	918015	919256	.	+	0	ID=GCA000560365_00884;Name=putative cysteine desulfurase;locus_tag=GCA000560365_00884;product=putative cysteine desulfurase;Dbxref=GO:0006534,GO:0030170,GO:0031071;gene=csd;Parent=GCA000560365_00884_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0520,COG:E,SO:0001217,UniParc:UPI00000D9D2B,UniRef:UniRef100_Q5HHH0,UniRef:UniRef50_O32164,UniRef:UniRef90_P63518;ec_number=2.8.1.7
contig_1	Pyrodigal	gene	919246	919710	.	+	.	ID=GCA000560365_00885_gene;locus_tag=GCA000560365_00885;gene=sufU
contig_1	Pyrodigal	CDS	919246	919710	.	+	0	ID=GCA000560365_00885;Name=Fe-S cluster assembly sulfur transfer protein SufU;locus_tag=GCA000560365_00885;product=Fe-S cluster assembly sulfur transfer protein SufU;Dbxref=GO:0005198,GO:0016226;gene=sufU;Parent=GCA000560365_00885_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0822,COG:O,RefSeq:WP_001010508.1,SO:0001217,UniParc:UPI0000054735,UniRef:UniRef100_Q2FZY4,UniRef:UniRef50_O32163,UniRef:UniRef90_Q2FZY4
contig_1	Pyrodigal	gene	919861	921258	.	+	.	ID=GCA000560365_00886_gene;locus_tag=GCA000560365_00886;gene=sufB
contig_1	Pyrodigal	CDS	919861	921258	.	+	0	ID=GCA000560365_00886;Name=Fe-S cluster assembly protein SufB;locus_tag=GCA000560365_00886;product=Fe-S cluster assembly protein SufB;Dbxref=GO:0016226;gene=sufB;Parent=GCA000560365_00886_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0719,COG:O,RefSeq:WP_001074405.1,SO:0001217,UniParc:UPI00000D7837,UniRef:UniRef100_Q2FZY3,UniRef:UniRef50_O32162,UniRef:UniRef90_Q2FZY3
contig_1	Pyrodigal	gene	921588	921902	.	-	.	ID=GCA000560365_00887_gene;locus_tag=GCA000560365_00887
contig_1	Pyrodigal	CDS	921588	921902	.	-	0	ID=GCA000560365_00887;Name=hypothetical protein;locus_tag=GCA000560365_00887;product=hypothetical protein;Parent=GCA000560365_00887_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000274029.1,SO:0001217,UniParc:UPI0000054731,UniRef:UniRef100_Q2FZY1,UniRef:UniRef50_Q2FZY1,UniRef:UniRef90_Q2FZY1
contig_1	Pyrodigal	gene	922267	923307	.	+	.	ID=GCA000560365_00888_gene;locus_tag=GCA000560365_00888;gene=corB
contig_1	Pyrodigal	CDS	922267	923307	.	+	0	ID=GCA000560365_00888;Name=CNNM transmembrane domain-containing protein;locus_tag=GCA000560365_00888;product=CNNM transmembrane domain-containing protein;gene=corB;Parent=GCA000560365_00888_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4536,COG:P,KEGG:K03699,RefSeq:WP_000582332.1,SO:0001217,UniParc:UPI00000D9D2D,UniRef:UniRef100_Q2FZY0,UniRef:UniRef50_K0J4R5,UniRef:UniRef90_Q2FZY0
contig_1	Pyrodigal	gene	923321	924388	.	+	.	ID=GCA000560365_00889_gene;locus_tag=GCA000560365_00889;gene=yrpB
contig_1	Pyrodigal	CDS	923321	924388	.	+	0	ID=GCA000560365_00889;Name=putative nitronate monooxygenase;locus_tag=GCA000560365_00889;product=putative nitronate monooxygenase;Dbxref=GO:0000166,GO:0009636,GO:0018580;gene=yrpB;Parent=GCA000560365_00889_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2070,COG:R,RefSeq:WP_000267247.1,SO:0001217,UniParc:UPI00003DECD4,UniRef:UniRef100_Q2FZX9,UniRef:UniRef50_Q2FZX9,UniRef:UniRef90_Q2FZX9;ec_number=1.13.12.-
contig_1	Pyrodigal	gene	924601	925449	.	+	.	ID=GCA000560365_00890_gene;locus_tag=GCA000560365_00890;gene=yecE
contig_1	Pyrodigal	CDS	924601	925449	.	+	0	ID=GCA000560365_00890;Name=Cytosolic protein;locus_tag=GCA000560365_00890;product=Cytosolic protein;gene=yecE;Parent=GCA000560365_00890_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1801,COG:R,RefSeq:WP_000608129.1,SO:0001217,UniParc:UPI00000D77D2,UniRef:UniRef100_Q2FZX7,UniRef:UniRef50_A0A0A8JCS6,UniRef:UniRef90_A0A7U7PXU7
contig_1	Pyrodigal	gene	925462	926289	.	+	.	ID=GCA000560365_00891_gene;locus_tag=GCA000560365_00891;gene=tauE
contig_1	Pyrodigal	CDS	925462	926289	.	+	0	ID=GCA000560365_00891;Name=putative membrane transporter protein;locus_tag=GCA000560365_00891;product=putative membrane transporter protein;gene=tauE;Parent=GCA000560365_00891_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0730,COG:P,RefSeq:WP_000927632.1,SO:0001217,UniParc:UPI000005472B,UniRef:UniRef100_Q2FZX6,UniRef:UniRef50_A0A7U7PY32,UniRef:UniRef90_A0A7U7PY32
contig_1	Pyrodigal	gene	926316	927635	.	+	.	ID=GCA000560365_00892_gene;locus_tag=GCA000560365_00892;gene=ushA
contig_1	Pyrodigal	CDS	926316	927635	.	+	0	ID=GCA000560365_00892;Name=UDP-sugar hydrolase 5-nucleotidase;locus_tag=GCA000560365_00892;product=UDP-sugar hydrolase 5-nucleotidase;gene=ushA;Parent=GCA000560365_00892_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0737,COG:FV,RefSeq:WP_001241217.1,SO:0001217,UniParc:UPI0000696BF5,UniRef:UniRef100_A0A266CWT1,UniRef:UniRef50_A0A2I7Y753,UniRef:UniRef90_A0A2I7Y753
contig_1	Pyrodigal	gene	927719	928636	.	+	.	ID=GCA000560365_00893_gene;locus_tag=GCA000560365_00893;gene=lipA
contig_1	Pyrodigal	CDS	927719	928636	.	+	0	ID=GCA000560365_00893;Name=lipoyl synthase;locus_tag=GCA000560365_00893;product=lipoyl synthase;Dbxref=GO:0005737,GO:0009107,GO:0016992,GO:0046872,GO:0051539,GO:1904047;gene=lipA;Parent=GCA000560365_00893_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0320,COG:H,KEGG:K03644,RefSeq:WP_000201875.1,SO:0001217,UniParc:UPI000012E6DB,UniRef:UniRef100_Q2FZX4,UniRef:UniRef50_Q2FZX4,UniRef:UniRef90_Q2FZX4;ec_number=2.8.1.8
contig_1	Pyrodigal	gene	928766	929149	.	+	.	ID=GCA000560365_00894_gene;locus_tag=GCA000560365_00894;gene=yutD
contig_1	Pyrodigal	CDS	928766	929149	.	+	0	ID=GCA000560365_00894;Name=DUF1027 domain-containing protein;locus_tag=GCA000560365_00894;product=DUF1027 domain-containing protein;gene=yutD;Parent=GCA000560365_00894_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4470,COG:S,RefSeq:WP_000598444.1,SO:0001217,UniParc:UPI00000D76FB,UniRef:UniRef100_Q2FZX3,UniRef:UniRef50_S2XM05,UniRef:UniRef90_Q2FZX3
contig_1	Pyrodigal	gene	929228	929494	.	-	.	ID=GCA000560365_00895_gene;locus_tag=GCA000560365_00895
contig_1	Pyrodigal	CDS	929228	929494	.	-	0	ID=GCA000560365_00895;Name=Cytosolic protein;locus_tag=GCA000560365_00895;product=Cytosolic protein;Parent=GCA000560365_00895_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000566649.1,SO:0001217,UniParc:UPI0000054726,UniRef:UniRef100_Q2FZX2,UniRef:UniRef50_Q2FZX2,UniRef:UniRef90_Q2FZX2
contig_1	Pyrodigal	gene	929592	930026	.	+	.	ID=GCA000560365_00896_gene;locus_tag=GCA000560365_00896;gene=yutE
contig_1	Pyrodigal	CDS	929592	930026	.	+	0	ID=GCA000560365_00896;Name=DUF86 domain-containing protein;locus_tag=GCA000560365_00896;product=DUF86 domain-containing protein;gene=yutE;Parent=GCA000560365_00896_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2445,COG:R,RefSeq:WP_000273981.1,SO:0001217,UniParc:UPI00000D9D30,UniRef:UniRef100_A0A0E7MS50,UniRef:UniRef50_A0A077UTM6,UniRef:UniRef90_A0A077UTM6
contig_1	Pyrodigal	gene	930026	930805	.	+	.	ID=GCA000560365_00897_gene;locus_tag=GCA000560365_00897;gene=nagD
contig_1	Pyrodigal	CDS	930026	930805	.	+	0	ID=GCA000560365_00897;Name=Acid sugar phosphatase;locus_tag=GCA000560365_00897;product=Acid sugar phosphatase;Dbxref=GO:0005737,GO:0016791,GO:0046872;gene=nagD;Parent=GCA000560365_00897_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0647,COG:F,RefSeq:WP_000816184.1,SO:0001217,UniParc:UPI0000054724,UniRef:UniRef100_Q2FZX0,UniRef:UniRef50_Q2FZX0,UniRef:UniRef90_Q2FZX0;ec_number=3.1.3.-
contig_1	Pyrodigal	gene	930838	931797	.	+	.	ID=GCA000560365_00898_gene;locus_tag=GCA000560365_00898;gene=ldhA
contig_1	Pyrodigal	CDS	930838	931797	.	+	0	ID=GCA000560365_00898;Name=Glyoxylate reductase;locus_tag=GCA000560365_00898;product=Glyoxylate reductase;gene=ldhA;Parent=GCA000560365_00898_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CHR,COG:COG1052,RefSeq:WP_000239131.1,SO:0001217,UniParc:UPI00000CAD05,UniRef:UniRef100_Q2FZW9,UniRef:UniRef50_A0A1W7ABE9,UniRef:UniRef90_A0A0U1MIE0
contig_1	Pyrodigal	gene	932209	932361	.	+	.	ID=GCA000560365_00899_gene;locus_tag=GCA000560365_00899;gene=dltX
contig_1	Pyrodigal	CDS	932209	932361	.	+	0	ID=GCA000560365_00899;Name=Teichoic acid D-Ala incorporation-associated protein DltX;locus_tag=GCA000560365_00899;product=Teichoic acid D-Ala incorporation-associated protein DltX;gene=dltX;Parent=GCA000560365_00899_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000837752.1,SO:0001217,UniParc:UPI00000D78B3,UniRef:UniRef100_Q2FZW7,UniRef:UniRef50_Q2FZW7,UniRef:UniRef90_Q2FZW7
contig_1	Pyrodigal	gene	932377	933834	.	+	.	ID=GCA000560365_00900_gene;locus_tag=GCA000560365_00900;gene=dltA
contig_1	Pyrodigal	CDS	932377	933834	.	+	0	ID=GCA000560365_00900;Name=D-alanine--poly(phosphoribitol) ligase subunit DltA;locus_tag=GCA000560365_00900;product=D-alanine--poly(phosphoribitol) ligase subunit DltA;Dbxref=GO:0005524,GO:0005737,GO:0019350,GO:0047473,GO:0070395;gene=dltA;Parent=GCA000560365_00900_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1020,COG:Q,RefSeq:WP_000129653.1,SO:0001217,UniParc:UPI0000054720,UniRef:UniRef100_Q2FZW6,UniRef:UniRef50_P68876,UniRef:UniRef90_P68876;ec_number=6.2.1.54
contig_1	Pyrodigal	gene	933831	935045	.	+	.	ID=GCA000560365_00901_gene;locus_tag=GCA000560365_00901;gene=dltB
contig_1	Pyrodigal	CDS	933831	935045	.	+	0	ID=GCA000560365_00901;Name=PG:teichoic acid D-alanyltransferase DltB;locus_tag=GCA000560365_00901;product=PG:teichoic acid D-alanyltransferase DltB;Dbxref=GO:0016746,GO:0070395;gene=dltB;Parent=GCA000560365_00901_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000613541,COG:COG1696,COG:M,KEGG:K03739,RefSeq:WP_000613541.1,SO:0001217,UniParc:UPI000005471F,UniRef:UniRef100_Q2FZW5,UniRef:UniRef50_B9EAK7,UniRef:UniRef90_A0A7U7JTN1
contig_1	Pyrodigal	gene	935063	935299	.	+	.	ID=GCA000560365_00902_gene;locus_tag=GCA000560365_00902;gene=dltC
contig_1	Pyrodigal	CDS	935063	935299	.	+	0	ID=GCA000560365_00902;Name=D-alanine--poly(phosphoribitol) ligase subunit 2;locus_tag=GCA000560365_00902;product=D-alanine--poly(phosphoribitol) ligase subunit 2;Dbxref=GO:0005737,GO:0019350,GO:0036370,GO:0070395,GO:0071555;gene=dltC;Parent=GCA000560365_00902_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0236,COG:I,RefSeq:WP_000395692.1,SO:0001217,UniParc:UPI000005471E,UniRef:UniRef100_Q2FZW4,UniRef:UniRef50_P39579,UniRef:UniRef90_Q2FZW4;ec_number=6.1.1.13
contig_1	Pyrodigal	gene	935296	936471	.	+	.	ID=GCA000560365_00903_gene;locus_tag=GCA000560365_00903;gene=dltD
contig_1	Pyrodigal	CDS	935296	936471	.	+	0	ID=GCA000560365_00903;Name=D-alanyl-lipoteichoic acid biosynthesis protein DltD;locus_tag=GCA000560365_00903;product=D-alanyl-lipoteichoic acid biosynthesis protein DltD;Dbxref=GO:0005886,GO:0070394,GO:0070395;gene=dltD;Parent=GCA000560365_00903_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3966,COG:M,KEGG:K03740,RefSeq:WP_000769417.1,SO:0001217,UniParc:UPI0000696BF6,UniRef:UniRef100_A0A0E8G8K9,UniRef:UniRef50_Q2FZW3,UniRef:UniRef90_Q2FZW3
contig_1	Pyrodigal	gene	936734	936976	.	-	.	ID=GCA000560365_00904_gene;locus_tag=GCA000560365_00904;gene=nifU
contig_1	Pyrodigal	CDS	936734	936976	.	-	0	ID=GCA000560365_00904;Name=NIF system FeS cluster assembly NifU C-terminal domain-containing protein;locus_tag=GCA000560365_00904;product=NIF system FeS cluster assembly NifU C-terminal domain-containing protein;gene=nifU;Parent=GCA000560365_00904_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0694,COG:O,RefSeq:WP_001141883.1,SO:0001217,UniParc:UPI000005471B,UniRef:UniRef100_Q2FZW2,UniRef:UniRef50_I0JQ31,UniRef:UniRef90_Q2FZW2
contig_1	Pyrodigal	gene	937077	937400	.	+	.	ID=GCA000560365_00905_gene;locus_tag=GCA000560365_00905;gene=yuzD
contig_1	Pyrodigal	CDS	937077	937400	.	+	0	ID=GCA000560365_00905;Name=Disulfide oxidoreductase;locus_tag=GCA000560365_00905;product=Disulfide oxidoreductase;gene=yuzD;Parent=GCA000560365_00905_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4837,COG:O,RefSeq:WP_000401414.1,SO:0001217,UniParc:UPI00000D9D32,UniRef:UniRef100_Q2FZW1,UniRef:UniRef50_A0A0H3JTK4,UniRef:UniRef90_A0A0H3JTK4
contig_1	Pyrodigal	gene	937459	938523	.	-	.	ID=GCA000560365_00906_gene;locus_tag=GCA000560365_00906;gene=ndh
contig_1	Pyrodigal	CDS	937459	938523	.	-	0	ID=GCA000560365_00906;Name=Type II NADH:quinone oxidoreductase;locus_tag=GCA000560365_00906;product=Type II NADH:quinone oxidoreductase;gene=ndh;Parent=GCA000560365_00906_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1252,RefSeq:WP_000794020.1,SO:0001217,UniParc:UPI0000054719,UniRef:UniRef100_Q2FZW0,UniRef:UniRef50_A0A239ZU84,UniRef:UniRef90_A0A077UJH8
contig_1	Pyrodigal	gene	938840	939076	.	+	.	ID=GCA000560365_00907_gene;locus_tag=GCA000560365_00907;gene=yuzB
contig_1	Pyrodigal	CDS	938840	939076	.	+	0	ID=GCA000560365_00907;Name=UPF0349 protein SACOL0942;locus_tag=GCA000560365_00907;product=UPF0349 protein SACOL0942;gene=yuzB;Parent=GCA000560365_00907_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4844,COG:S,RefSeq:WP_001068337.1,SO:0001217,UniParc:UPI0000054718,UniRef:UniRef100_Q2FZV9,UniRef:UniRef50_A4ISE9,UniRef:UniRef90_Q2FZV9
contig_1	Pyrodigal	gene	939089	939448	.	+	.	ID=GCA000560365_00908_gene;locus_tag=GCA000560365_00908;gene=iscA
contig_1	Pyrodigal	CDS	939089	939448	.	+	0	ID=GCA000560365_00908;Name=FeS cluster biogenesis domain-containing protein;locus_tag=GCA000560365_00908;product=FeS cluster biogenesis domain-containing protein;gene=iscA;Parent=GCA000560365_00908_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0316,COG:O,RefSeq:WP_001143497.1,SO:0001217,UniParc:UPI0000054717,UniRef:UniRef100_Q2FZV8,UniRef:UniRef50_A0A810E529,UniRef:UniRef90_G5JHW3
contig_1	Pyrodigal	gene	939902	941110	.	+	.	ID=GCA000560365_00909_gene;locus_tag=GCA000560365_00909;gene=ndh
contig_1	Pyrodigal	CDS	939902	941110	.	+	0	ID=GCA000560365_00909;Name=Type II NADH:quinone oxidoreductase;locus_tag=GCA000560365_00909;product=Type II NADH:quinone oxidoreductase;Dbxref=GO:0003955,GO:0005886,GO:0019646,GO:0050136;gene=ndh;Parent=GCA000560365_00909_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1252,RefSeq:WP_000046076.1,SO:0001217,UniParc:UPI0000054716,UniRef:UniRef100_Q2FZV7,UniRef:UniRef50_Q2FZV7,UniRef:UniRef90_Q2FZV7;ec_number=1.6.5.9
contig_1	Pyrodigal	gene	941241	942716	.	+	.	ID=GCA000560365_00910_gene;locus_tag=GCA000560365_00910;gene=pepB
contig_1	Pyrodigal	CDS	941241	942716	.	+	0	ID=GCA000560365_00910;Name=Leucyl aminopeptidase family protein;locus_tag=GCA000560365_00910;product=Leucyl aminopeptidase family protein;gene=pepB;Parent=GCA000560365_00910_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0260,COG:E,RefSeq:WP_001009697.1,SO:0001217,UniParc:UPI00000D9D35,UniRef:UniRef100_X5EH11,UniRef:UniRef50_B9DIX2,UniRef:UniRef90_A0A0U1MHC9
contig_1	Pyrodigal	gene	943127	944443	.	+	.	ID=GCA000560365_00911_gene;locus_tag=GCA000560365_00911;gene=yuiF
contig_1	Pyrodigal	CDS	943127	944443	.	+	0	ID=GCA000560365_00911;Name=Na+/H+ antiporter family protein;locus_tag=GCA000560365_00911;product=Na+/H+ antiporter family protein;gene=yuiF;Parent=GCA000560365_00911_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2056,COG:E,KEGG:K07084,RefSeq:WP_000606324.1,SO:0001217,UniParc:UPI00000D771F,UniRef:UniRef100_Q2FZV5,UniRef:UniRef50_Q2FZV5,UniRef:UniRef90_Q2FZV5
contig_1	Pyrodigal	gene	944462	944836	.	+	.	ID=GCA000560365_00912_gene;locus_tag=GCA000560365_00912;gene=paaI
contig_1	Pyrodigal	CDS	944462	944836	.	+	0	ID=GCA000560365_00912;Name=ComA operon protein 2;locus_tag=GCA000560365_00912;product=ComA operon protein 2;gene=paaI;Parent=GCA000560365_00912_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2050,COG:Q,RefSeq:WP_000149295.1,SO:0001217,UniParc:UPI0000052293,UniRef:UniRef100_Q2FZV4,UniRef:UniRef50_A0A090LQF4,UniRef:UniRef90_A0A090LQF4
contig_1	Pyrodigal	gene	944892	946046	.	-	.	ID=GCA000560365_00913_gene;locus_tag=GCA000560365_00913;gene=ndh
contig_1	Pyrodigal	CDS	944892	946046	.	-	0	ID=GCA000560365_00913;Name=FAD/NAD(P)-binding domain-containing protein;locus_tag=GCA000560365_00913;product=FAD/NAD(P)-binding domain-containing protein;gene=ndh;Parent=GCA000560365_00913_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1252,RefSeq:WP_000558769.1,SO:0001217,UniParc:UPI0000054209,UniRef:UniRef100_Q2G2I0,UniRef:UniRef50_Q2G2I0,UniRef:UniRef90_Q2G2I0
contig_1	Pyrodigal	gene	946295	946651	.	-	.	ID=GCA000560365_00914_gene;locus_tag=GCA000560365_00914;gene=mnhG1
contig_1	Pyrodigal	CDS	946295	946651	.	-	0	ID=GCA000560365_00914;Name=Na+/H+ antiporter Mnh1 subunit G;locus_tag=GCA000560365_00914;product=Na+/H+ antiporter Mnh1 subunit G;Dbxref=GO:0005886,GO:0015385;gene=mnhG1;Parent=GCA000560365_00914_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000590451,COG:COG1320,COG:P,RefSeq:WP_000590451.1,SO:0001217,UniParc:UPI00000D7713,UniRef:UniRef100_Q2G2H9,UniRef:UniRef50_Q2G2H9,UniRef:UniRef90_Q2G2H9
contig_1	Pyrodigal	gene	946629	946922	.	-	.	ID=GCA000560365_00915_gene;locus_tag=GCA000560365_00915;gene=mnhF1
contig_1	Pyrodigal	CDS	946629	946922	.	-	0	ID=GCA000560365_00915;Name=Na+/H+ antiporter Mnh1 subunit F;locus_tag=GCA000560365_00915;product=Na+/H+ antiporter Mnh1 subunit F;Dbxref=GO:0005886,GO:0015385;gene=mnhF1;Parent=GCA000560365_00915_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001016306,COG:COG2212,COG:P,RefSeq:WP_001016306.1,SO:0001217,UniParc:UPI00000522D3,UniRef:UniRef100_Q2G2H6,UniRef:UniRef50_Q2G2H6,UniRef:UniRef90_Q2G2H6
contig_1	Pyrodigal	gene	946922	947401	.	-	.	ID=GCA000560365_00916_gene;locus_tag=GCA000560365_00916;gene=mnhE1
contig_1	Pyrodigal	CDS	946922	947401	.	-	0	ID=GCA000560365_00916;Name=Na+/H+ antiporter Mnh1 subunit E;locus_tag=GCA000560365_00916;product=Na+/H+ antiporter Mnh1 subunit E;Dbxref=GO:0005886,GO:0006814,GO:0008324,GO:0015297,GO:1902600;gene=mnhE1;Parent=GCA000560365_00916_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000290674,COG:COG1863,COG:P,RefSeq:WP_000290674.1,SO:0001217,UniParc:UPI0000054228,UniRef:UniRef100_Q2G2H8,UniRef:UniRef50_Q2G2H8,UniRef:UniRef90_Q2G2H8
contig_1	Pyrodigal	gene	947403	948899	.	-	.	ID=GCA000560365_00917_gene;locus_tag=GCA000560365_00917;gene=mnhD1
contig_1	Pyrodigal	CDS	947403	948899	.	-	0	ID=GCA000560365_00917;Name=Na+/H+ antiporter Mnh1 subunit D;locus_tag=GCA000560365_00917;product=Na+/H+ antiporter Mnh1 subunit D;Dbxref=GO:0005886,GO:0006814,GO:0008137,GO:0015297,GO:0015386,GO:0042773;gene=mnhD1;Parent=GCA000560365_00917_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000573077,COG:COG0651,COG:CP,RefSeq:WP_000573079.1,SO:0001217,UniParc:UPI0000696BF7,UniRef:UniRef100_Q2FIC6,UniRef:UniRef50_Q2G2H7,UniRef:UniRef90_Q2G2H7
contig_1	Pyrodigal	gene	948892	949233	.	-	.	ID=GCA000560365_00918_gene;locus_tag=GCA000560365_00918;gene=mnhC1
contig_1	Pyrodigal	CDS	948892	949233	.	-	0	ID=GCA000560365_00918;Name=Na+/H+ antiporter Mnh1 subunit C;locus_tag=GCA000560365_00918;product=Na+/H+ antiporter Mnh1 subunit C;Dbxref=GO:0005886,GO:0006812,GO:0006814,GO:0008324,GO:0015297,GO:1902600;gene=mnhC1;Parent=GCA000560365_00918_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000402803,COG:COG1006,COG:P,RefSeq:WP_000402803.1,SO:0001217,UniParc:UPI00000D765F,UniRef:UniRef100_Q2FZV3,UniRef:UniRef50_O05260,UniRef:UniRef90_Q2FZV3
contig_1	Pyrodigal	gene	949233	949661	.	-	.	ID=GCA000560365_00919_gene;locus_tag=GCA000560365_00919;gene=mnhB1
contig_1	Pyrodigal	CDS	949233	949661	.	-	0	ID=GCA000560365_00919;Name=Na+/H+ antiporter Mnh1 subunit B;locus_tag=GCA000560365_00919;product=Na+/H+ antiporter Mnh1 subunit B;Dbxref=GO:0005886,GO:0006814,GO:0008324,GO:0015297,GO:1902600;gene=mnhB1;Parent=GCA000560365_00919_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001081626,COG:COG2111,COG:P,RefSeq:WP_001081626.1,SO:0001217,UniParc:UPI0000054246,UniRef:UniRef100_Q2FZV2,UniRef:UniRef50_Q2FZV2,UniRef:UniRef90_Q2FZV2
contig_1	Pyrodigal	gene	949654	952059	.	-	.	ID=GCA000560365_00920_gene;locus_tag=GCA000560365_00920;gene=mnhA1
contig_1	Pyrodigal	CDS	949654	952059	.	-	0	ID=GCA000560365_00920;Name=Na+/H+ antiporter Mnh1 subunit A;locus_tag=GCA000560365_00920;product=Na+/H+ antiporter Mnh1 subunit A;Dbxref=GO:0005886,GO:0006814,GO:0015297,GO:0051139,GO:0098662,GO:1902600;gene=mnhA1;Parent=GCA000560365_00920_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_042727539,COG:COG2111,COG:P,RefSeq:WP_000054609.1,SO:0001217,UniParc:UPI00000D9D38,UniRef:UniRef100_Q2FZV1,UniRef:UniRef50_Q9K2S2,UniRef:UniRef90_Q9ZNG6
contig_1	Pyrodigal	gene	952190	952573	.	-	.	ID=GCA000560365_00921_gene;locus_tag=GCA000560365_00921
contig_1	Pyrodigal	CDS	952190	952573	.	-	0	ID=GCA000560365_00921;Name=Kinase associated B family protein;locus_tag=GCA000560365_00921;product=Kinase associated B family protein;Parent=GCA000560365_00921_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000781156.1,SO:0001217,UniParc:UPI000005425C,UniRef:UniRef100_Q2FZV0,UniRef:UniRef50_A0A0M2NU22,UniRef:UniRef90_A0A380DMN1
contig_1	Pyrodigal	gene	952637	953230	.	+	.	ID=GCA000560365_00922_gene;locus_tag=GCA000560365_00922;gene=ppiB
contig_1	Pyrodigal	CDS	952637	953230	.	+	0	ID=GCA000560365_00922;Name=Putative peptidyl-prolyl cis-trans isomerase;locus_tag=GCA000560365_00922;product=Putative peptidyl-prolyl cis-trans isomerase;Dbxref=GO:0140839,GO:0140840;gene=ppiB;Parent=GCA000560365_00922_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0652,COG:O,RefSeq:WP_000035058.1,SO:0001217,UniParc:UPI000005425D,UniRef:UniRef100_Q2FZU9,UniRef:UniRef50_Q2FZU9,UniRef:UniRef90_Q2FZU9;ec_number=5.2.1.8
contig_1	Pyrodigal	gene	953646	954023	.	+	.	ID=GCA000560365_00923_gene;locus_tag=GCA000560365_00923;gene=ygs
contig_1	Pyrodigal	CDS	953646	954023	.	+	0	ID=GCA000560365_00923;Name=S1 domain-containing post-transcriptional regulator Ygs;locus_tag=GCA000560365_00923;product=S1 domain-containing post-transcriptional regulator Ygs;gene=ygs;Parent=GCA000560365_00923_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1098,COG:R,RefSeq:WP_001067294.1,SO:0001217,UniParc:UPI00000D9D39,UniRef:UniRef100_A0A7Z7QY58,UniRef:UniRef50_B9DIU9,UniRef:UniRef90_A0A1L8Y4M2
contig_1	Pyrodigal	gene	954385	955512	.	+	.	ID=GCA000560365_00924_gene;locus_tag=GCA000560365_00924;gene=fadH
contig_1	Pyrodigal	CDS	954385	955512	.	+	0	ID=GCA000560365_00924;Name=Putative NADH-dependent flavin oxidoreductase YqiG;locus_tag=GCA000560365_00924;product=Putative NADH-dependent flavin oxidoreductase YqiG;gene=fadH;Parent=GCA000560365_00924_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1902,RefSeq:WP_000838037.1,SO:0001217,UniParc:UPI0000054272,UniRef:UniRef100_Q2FZU7,UniRef:UniRef50_S2YL03,UniRef:UniRef90_A0A0U1MHF9
contig_1	Pyrodigal	gene	955820	957010	.	+	.	ID=GCA000560365_00925_gene;locus_tag=GCA000560365_00925;gene=rocD
contig_1	Pyrodigal	CDS	955820	957010	.	+	0	ID=GCA000560365_00925;Name=ornithine--oxo-acid transaminase;locus_tag=GCA000560365_00925;product=ornithine--oxo-acid transaminase;Dbxref=GO:0004587,GO:0005737,GO:0030170,GO:0042802,GO:0055129;gene=rocD;Parent=GCA000560365_00925_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4992,COG:E,RefSeq:WP_000167314.1,SO:0001217,UniParc:UPI00000D76C6,UniRef:UniRef100_Q5HHC8,UniRef:UniRef50_P38021,UniRef:UniRef90_Q8CT82;ec_number=2.6.1.13
contig_1	Pyrodigal	gene	957119	958363	.	+	.	ID=GCA000560365_00926_gene;locus_tag=GCA000560365_00926;gene=gluD
contig_1	Pyrodigal	CDS	957119	958363	.	+	0	ID=GCA000560365_00926;Name=NAD-specific glutamate dehydrogenase;locus_tag=GCA000560365_00926;product=NAD-specific glutamate dehydrogenase;Dbxref=GO:0004352,GO:0006520,GO:0006538;gene=gluD;Parent=GCA000560365_00926_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0334,COG:E,RefSeq:WP_000138486.1,SO:0001217,UniParc:UPI0000696BFA,UniRef:UniRef100_A0A1S5ZSF2,UniRef:UniRef50_P39633,UniRef:UniRef90_Q5HHC7;ec_number=1.4.1.2
contig_1	Infernal	gene	958502	958779	.	-	.	ID=GCA000560365_00927_gene;locus_tag=GCA000560365_00927;gene=S35
contig_1	Infernal	ncRNA	958502	958779	8.6e-15	-	.	ID=GCA000560365_00927;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000560365_00927;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000560365_00927_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	958866	959795	.	-	.	ID=GCA000560365_00928_gene;locus_tag=GCA000560365_00928;gene=ugpQ
contig_1	Pyrodigal	CDS	958866	959795	.	-	0	ID=GCA000560365_00928;Name=GP-PDE domain-containing protein;locus_tag=GCA000560365_00928;product=GP-PDE domain-containing protein;gene=ugpQ;Parent=GCA000560365_00928_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0584,COG:I,RefSeq:WP_000185319.1,SO:0001217,UniParc:UPI00000542A2,UniRef:UniRef100_Q2FZU3,UniRef:UniRef50_A0A380GA35,UniRef:UniRef90_Q2FZU3
contig_1	Pyrodigal	gene	960037	961416	.	-	.	ID=GCA000560365_00929_gene;locus_tag=GCA000560365_00929;gene=argH
contig_1	Pyrodigal	CDS	960037	961416	.	-	0	ID=GCA000560365_00929;Name=argininosuccinate lyase;locus_tag=GCA000560365_00929;product=argininosuccinate lyase;Dbxref=GO:0004056,GO:0005829,GO:0006526,GO:0042450;gene=argH;Parent=GCA000560365_00929_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0165,COG:E,KEGG:K01755,RefSeq:WP_000066062.1,SO:0001217,UniParc:UPI0000696BFB,UniRef:UniRef100_Q2FIB5,UniRef:UniRef50_P73257,UniRef:UniRef90_Q2FZU2;ec_number=4.3.2.1
contig_1	Pyrodigal	gene	961406	962611	.	-	.	ID=GCA000560365_00930_gene;locus_tag=GCA000560365_00930;gene=argG
contig_1	Pyrodigal	CDS	961406	962611	.	-	0	ID=GCA000560365_00930;Name=argininosuccinate synthase;locus_tag=GCA000560365_00930;product=argininosuccinate synthase;Dbxref=GO:0000050,GO:0000053,GO:0004055,GO:0005524,GO:0005737,GO:0006526;gene=argG;Parent=GCA000560365_00930_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0137,COG:E,KEGG:K01940,RefSeq:WP_000660045.1,SO:0001217,UniParc:UPI000012619A,UniRef:UniRef100_Q2FZU1,UniRef:UniRef50_A0RJM4,UniRef:UniRef90_Q2FZU1;ec_number=6.3.4.5
contig_1	Pyrodigal	gene	962962	964293	.	+	.	ID=GCA000560365_00931_gene;locus_tag=GCA000560365_00931;gene=pgi
contig_1	Pyrodigal	CDS	962962	964293	.	+	0	ID=GCA000560365_00931;Name=glucose-6-phosphate isomerase;locus_tag=GCA000560365_00931;product=glucose-6-phosphate isomerase;Dbxref=GO:0004347,GO:0005829,GO:0006094,GO:0006096,GO:0048029,GO:0051156,GO:0097367;gene=pgi;Parent=GCA000560365_00931_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000148855.1,SO:0001217,UniParc:UPI000012AF6E,UniRef:UniRef100_Q2FIB3,UniRef:UniRef50_P13376,UniRef:UniRef90_Q2FIB3;ec_number=5.3.1.9
contig_1	Pyrodigal	gene	964618	965193	.	+	.	ID=GCA000560365_00932_gene;locus_tag=GCA000560365_00932;gene=tVP38
contig_1	Pyrodigal	CDS	964618	965193	.	+	0	ID=GCA000560365_00932;Name=Putative undecaprenyl phosphate transporter SAOUHSC_00901;locus_tag=GCA000560365_00932;product=Putative undecaprenyl phosphate transporter SAOUHSC_00901;Dbxref=GO:0005886;gene=tVP38;Parent=GCA000560365_00932_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0398,COG:S,RefSeq:WP_000007967.1,SO:0001217,UniParc:UPI00000D781A,UniRef:UniRef100_Q2FZT9,UniRef:UniRef50_Q2FZT9,UniRef:UniRef90_Q2FZT9
contig_1	Pyrodigal	gene	965198	965722	.	+	.	ID=GCA000560365_00933_gene;locus_tag=GCA000560365_00933;gene=lepB
contig_1	Pyrodigal	CDS	965198	965722	.	+	0	ID=GCA000560365_00933;Name=signal peptidase I;locus_tag=GCA000560365_00933;product=signal peptidase I;Dbxref=GO:0004252,GO:0005886,GO:0006465,GO:0009306,GO:0016020;gene=lepB;Parent=GCA000560365_00933_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0681,COG:U,KEGG:K03100,RefSeq:WP_000758215.1,SO:0001217,UniParc:UPI00004B5B80,UniRef:UniRef100_Q5HHC0,UniRef:UniRef50_P0A063,UniRef:UniRef90_P0A063;ec_number=3.4.21.89
contig_1	Pyrodigal	gene	965738	966313	.	+	.	ID=GCA000560365_00934_gene;locus_tag=GCA000560365_00934;gene=lepB
contig_1	Pyrodigal	CDS	965738	966313	.	+	0	ID=GCA000560365_00934;Name=signal peptidase I;locus_tag=GCA000560365_00934;product=signal peptidase I;Dbxref=GO:0004252,GO:0005886,GO:0006465,GO:0009306,GO:0016020;gene=lepB;Parent=GCA000560365_00934_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0681,COG:U,KEGG:K03100,RefSeq:WP_000711486.1,SO:0001217,UniParc:UPI0000627620,UniRef:UniRef100_Q5HHB9,UniRef:UniRef50_Q5HHB9,UniRef:UniRef90_Q5HHB9;ec_number=3.4.21.89
contig_1	Pyrodigal	gene	966473	969949	.	+	.	ID=GCA000560365_00935_gene;locus_tag=GCA000560365_00935;gene=addB
contig_1	Pyrodigal	CDS	966473	969949	.	+	0	ID=GCA000560365_00935;Name=helicase-exonuclease AddAB subunit AddB;locus_tag=GCA000560365_00935;product=helicase-exonuclease AddAB subunit AddB;Dbxref=GO:0000724,GO:0003690,GO:0004527,GO:0005524,GO:0008409,GO:0009378,GO:0036121,GO:0046872,GO:0051539,GO:0061749,GO:1990518;gene=addB;Parent=GCA000560365_00935_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3857,COG:L,RefSeq:WP_000172342.1,SO:0001217,UniParc:UPI0000054B28,UniRef:UniRef100_Q2FZT6,UniRef:UniRef50_Q2FZT6,UniRef:UniRef90_Q2FZT6;ec_number=3.6.4.12
contig_1	Pyrodigal	gene	969950	973603	.	+	.	ID=GCA000560365_00936_gene;locus_tag=GCA000560365_00936;gene=addA
contig_1	Pyrodigal	CDS	969950	973603	.	+	0	ID=GCA000560365_00936;Name=helicase-exonuclease AddAB subunit AddA;locus_tag=GCA000560365_00936;product=helicase-exonuclease AddAB subunit AddA;Dbxref=GO:0000724,GO:0003678,GO:0003689,GO:0003690,GO:0005524,GO:0005829,GO:0006302,GO:0008408,GO:0009378,GO:0016818,GO:0016853,GO:0016887,GO:0033202,GO:0036121,GO:0061749,GO:0061775,GO:0140584,GO:0140665,GO:0140849,GO:1990518;gene=addA;Parent=GCA000560365_00936_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1074,COG:L,KEGG:K16898,RefSeq:WP_000154914.1,SO:0001217,UniParc:UPI0000696BFD,UniRef:UniRef100_Q2FIA8,UniRef:UniRef50_Q4L4Y3,UniRef:UniRef90_Q2FZT5;ec_number=5.6.2.4
contig_1	Pyrodigal	gene	973769	974671	.	+	.	ID=GCA000560365_00937_gene;locus_tag=GCA000560365_00937;gene=ycgM
contig_1	Pyrodigal	CDS	973769	974671	.	+	0	ID=GCA000560365_00937;Name=putative protein SAS0838;locus_tag=GCA000560365_00937;product=putative protein SAS0838;Dbxref=GO:0018773,GO:0046872;gene=ycgM;Parent=GCA000560365_00937_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0179,COG:Q,RefSeq:WP_000670752.1,SO:0001217,UniParc:UPI0000054B26,UniRef:UniRef100_Q2FZT4,UniRef:UniRef50_Q2FZT4,UniRef:UniRef90_Q2FZT4
contig_1	Pyrodigal	gene	975000	975389	.	+	.	ID=GCA000560365_00938_gene;locus_tag=GCA000560365_00938
contig_1	Pyrodigal	CDS	975000	975389	.	+	0	ID=GCA000560365_00938;Name=UPF0344 protein MW0851;locus_tag=GCA000560365_00938;product=UPF0344 protein MW0851;Dbxref=GO:0005886;Parent=GCA000560365_00938_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000902817.1,SO:0001217,UniParc:UPI00004B5B83,UniRef:UniRef100_Q2FZT3,UniRef:UniRef50_Q2FZT3,UniRef:UniRef90_Q2FZT3
contig_1	Pyrodigal	gene	975560	976876	.	-	.	ID=GCA000560365_00939_gene;locus_tag=GCA000560365_00939;gene=cdr
contig_1	Pyrodigal	CDS	975560	976876	.	-	0	ID=GCA000560365_00939;Name=CoA-disulfide reductase;locus_tag=GCA000560365_00939;product=CoA-disulfide reductase;Dbxref=GO:0003756,GO:0016491,GO:0045454,GO:0050451,GO:0050660,GO:0050661;gene=cdr;Parent=GCA000560365_00939_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0446,COG:I,KEGG:K08255,RefSeq:WP_001124525.1,SO:0001217,UniParc:UPI0000054B23,UniRef:UniRef100_Q2FIA5,UniRef:UniRef50_O52582,UniRef:UniRef90_O52582;ec_number=1.8.1.14
contig_1	Pyrodigal	gene	976928	977752	.	-	.	ID=GCA000560365_00940_gene;locus_tag=GCA000560365_00940;gene=cof
contig_1	Pyrodigal	CDS	976928	977752	.	-	0	ID=GCA000560365_00940;Name=Cof-type HAD-IIB family hydrolase;locus_tag=GCA000560365_00940;product=Cof-type HAD-IIB family hydrolase;gene=cof;Parent=GCA000560365_00940_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0561,COG:HR,KEGG:K21064,RefSeq:WP_001182436.1,SO:0001217,UniParc:UPI000005227E,UniRef:UniRef100_Q2FZT1,UniRef:UniRef50_P70947,UniRef:UniRef90_Q2FZT1;ec_number=3.1.3.104
contig_1	Pyrodigal	gene	977866	978174	.	+	.	ID=GCA000560365_00941_gene;locus_tag=GCA000560365_00941;gene=sufT
contig_1	Pyrodigal	CDS	977866	978174	.	+	0	ID=GCA000560365_00941;Name=Fe-S protein maturation auxiliary factor SufT;locus_tag=GCA000560365_00941;product=Fe-S protein maturation auxiliary factor SufT;gene=sufT;Parent=GCA000560365_00941_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2151,COG:O,RefSeq:WP_000390575.1,SO:0001217,UniParc:UPI00000D76BA,UniRef:UniRef100_A0A0H2XI17,UniRef:UniRef50_A0A0H2XI17,UniRef:UniRef90_A0A0H2XI17
contig_1	Pyrodigal	gene	978721	980535	.	+	.	ID=GCA000560365_00942_gene;locus_tag=GCA000560365_00942;gene=oafA
contig_1	Pyrodigal	CDS	978721	980535	.	+	0	ID=GCA000560365_00942;Name=Putative O-acetyltransferase MW0856;locus_tag=GCA000560365_00942;product=Putative O-acetyltransferase MW0856;Dbxref=GO:0005886,GO:0009103,GO:0016747;gene=oafA;Parent=GCA000560365_00942_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1835,COG:M,RefSeq:WP_001044214.1,SO:0001217,UniParc:UPI0000054B21,UniRef:UniRef100_Q5HHB1,UniRef:UniRef50_Q2FV54,UniRef:UniRef90_Q99VB6;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	980738	983347	.	+	.	ID=GCA000560365_00943_gene;locus_tag=GCA000560365_00943;gene=clpB
contig_1	Pyrodigal	CDS	980738	983347	.	+	0	ID=GCA000560365_00943;Name=ATP-dependent chaperone ClpB;locus_tag=GCA000560365_00943;product=ATP-dependent chaperone ClpB;Dbxref=GO:0005524,GO:0005737,GO:0009408,GO:0016887,GO:0034605,GO:0042026;gene=clpB;Parent=GCA000560365_00943_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0542,COG:O,RefSeq:WP_000353955.1,SO:0001217,UniParc:UPI00003B1A86,UniRef:UniRef100_Q5HHB0,UniRef:UniRef50_Q8CPT5,UniRef:UniRef90_Q99VB5
contig_1	Pyrodigal	gene	983406	984275	.	-	.	ID=GCA000560365_00944_gene;locus_tag=GCA000560365_00944;gene=lysR
contig_1	Pyrodigal	CDS	983406	984275	.	-	0	ID=GCA000560365_00944;Name=HTH lysR-type domain-containing protein;locus_tag=GCA000560365_00944;product=HTH lysR-type domain-containing protein;gene=lysR;Parent=GCA000560365_00944_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0583,COG:K,RefSeq:WP_001047066.1,SO:0001217,UniParc:UPI0000054B1F,UniRef:UniRef100_Q2FZS7,UniRef:UniRef50_Q2FZS7,UniRef:UniRef90_Q2FZS7
contig_1	Pyrodigal	gene	984385	985530	.	+	.	ID=GCA000560365_00945_gene;locus_tag=GCA000560365_00945;gene=leuA
contig_1	Pyrodigal	CDS	984385	985530	.	+	0	ID=GCA000560365_00945;Name=2-isopropylmalate synthase;locus_tag=GCA000560365_00945;product=2-isopropylmalate synthase;gene=leuA;Parent=GCA000560365_00945_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0119,COG:E,RefSeq:WP_000619366.1,SO:0001217,UniParc:UPI0000696BFF,UniRef:UniRef100_A0A0E8GC24,UniRef:UniRef50_A0A4T9Z9Z3,UniRef:UniRef90_A0A4T9Z9Z3
contig_1	Pyrodigal	gene	985514	986155	.	+	.	ID=GCA000560365_00946_gene;locus_tag=GCA000560365_00946;gene=tsaC
contig_1	Pyrodigal	CDS	985514	986155	.	+	0	ID=GCA000560365_00946;Name=L-threonylcarbamoyladenylate synthase;locus_tag=GCA000560365_00946;product=L-threonylcarbamoyladenylate synthase;Dbxref=GO:0003725,GO:0006400,GO:0061710;gene=tsaC;Parent=GCA000560365_00946_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0009,COG:J,RefSeq:WP_000404422.1,SO:0001217,UniParc:UPI0000054B1D,UniRef:UniRef100_Q2FZS5,UniRef:UniRef50_A0A7Z7W199,UniRef:UniRef90_A0A7Z7W199;ec_number=2.7.7.87
contig_1	Pyrodigal	gene	986148	987266	.	+	.	ID=GCA000560365_00947_gene;locus_tag=GCA000560365_00947
contig_1	Pyrodigal	CDS	986148	987266	.	+	0	ID=GCA000560365_00947;Name=MFS transporter;locus_tag=GCA000560365_00947;product=MFS transporter;Parent=GCA000560365_00947_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001037436.1,SO:0001217,UniParc:UPI0000054B1C,UniRef:UniRef100_Q2FZS4,UniRef:UniRef50_Q2FZS4,UniRef:UniRef90_Q2FZS4
contig_1	Pyrodigal	gene	987250	987765	.	+	.	ID=GCA000560365_00948_gene;locus_tag=GCA000560365_00948;gene=ybhB
contig_1	Pyrodigal	CDS	987250	987765	.	+	0	ID=GCA000560365_00948;Name=YbhB/YbcL family Raf kinase inhibitor-like protein;locus_tag=GCA000560365_00948;product=YbhB/YbcL family Raf kinase inhibitor-like protein;gene=ybhB;Parent=GCA000560365_00948_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1881,COG:R,RefSeq:WP_000695342.1,SO:0001217,UniParc:UPI0000054B1B,UniRef:UniRef100_Q2FZS3,UniRef:UniRef50_Q2FZS3,UniRef:UniRef90_Q2FZS3
contig_1	Pyrodigal	gene	988076	988510	.	+	.	ID=GCA000560365_00949_gene;locus_tag=GCA000560365_00949
contig_1	Pyrodigal	CDS	988076	988510	.	+	0	ID=GCA000560365_00949;Name=Cell surface like-protein Map-w;locus_tag=GCA000560365_00949;product=Cell surface like-protein Map-w;Parent=GCA000560365_00949_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K14204,RefSeq:WP_000769689.1,SO:0001217,UniParc:UPI0000054B19,UniRef:UniRef100_Q2FZS2,UniRef:UniRef50_A0A224B134,UniRef:UniRef90_A0AAE8P9X9
contig_1	Pyrodigal	gene	988767	988952	.	-	.	ID=GCA000560365_00950_gene;locus_tag=GCA000560365_00950
contig_1	Pyrodigal	CDS	988767	988952	.	-	0	ID=GCA000560365_00950;Name=DUF2929 domain-containing protein;locus_tag=GCA000560365_00950;product=DUF2929 domain-containing protein;Parent=GCA000560365_00950_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000682089.1,SO:0001217,UniParc:UPI0000054B18,UniRef:UniRef100_Q2FZS1,UniRef:UniRef50_Q2FZS1,UniRef:UniRef90_Q2FZS1
contig_1	Pyrodigal	gene	989247	990188	.	+	.	ID=GCA000560365_00951_gene;locus_tag=GCA000560365_00951;gene=fabH
contig_1	Pyrodigal	CDS	989247	990188	.	+	0	ID=GCA000560365_00951;Name=Beta-ketoacyl-[acyl-carrier-protein] synthase III;locus_tag=GCA000560365_00951;product=Beta-ketoacyl-[acyl-carrier-protein] synthase III;Dbxref=GO:0004315,GO:0005737,GO:0006633,GO:0033818;gene=fabH;Parent=GCA000560365_00951_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0332,COG:I,RefSeq:WP_001100525.1,SO:0001217,UniParc:UPI0000054B17,UniRef:UniRef100_Q2FZS0,UniRef:UniRef50_P68795,UniRef:UniRef90_P68795;ec_number=2.3.1.180
contig_1	Pyrodigal	gene	990200	991444	.	+	.	ID=GCA000560365_00952_gene;locus_tag=GCA000560365_00952;gene=fabF
contig_1	Pyrodigal	CDS	990200	991444	.	+	0	ID=GCA000560365_00952;Name=beta-ketoacyl-ACP synthase II;locus_tag=GCA000560365_00952;product=beta-ketoacyl-ACP synthase II;Dbxref=GO:0004315,GO:0005829,GO:0006633;gene=fabF;Parent=GCA000560365_00952_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0304,COG:IQ,RefSeq:WP_000081237.1,SO:0001217,UniParc:UPI0000696C00,UniRef:UniRef100_A0A0E8G9V2,UniRef:UniRef50_O34340,UniRef:UniRef90_Q5HHA1;ec_number=2.3.1.179
contig_1	Pyrodigal	gene	991499	991870	.	-	.	ID=GCA000560365_00953_gene;locus_tag=GCA000560365_00953
contig_1	Pyrodigal	CDS	991499	991870	.	-	0	ID=GCA000560365_00953;Name=DUF3899 domain-containing protein;locus_tag=GCA000560365_00953;product=DUF3899 domain-containing protein;Parent=GCA000560365_00953_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000915155.1,SO:0001217,UniParc:UPI0000054B15,UniRef:UniRef100_Q2FZR8,UniRef:UniRef50_Q2FZR8,UniRef:UniRef90_Q2FZR8
contig_1	Pyrodigal	gene	992113	993039	.	+	.	ID=GCA000560365_00954_gene;locus_tag=GCA000560365_00954;gene=opp3b
contig_1	Pyrodigal	CDS	992113	993039	.	+	0	ID=GCA000560365_00954;Name=oligopeptide ABC transporter permease;locus_tag=GCA000560365_00954;product=oligopeptide ABC transporter permease;Dbxref=GO:0043190,GO:0140359;gene=opp3b;Parent=GCA000560365_00954_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0601,COG:EP,RefSeq:WP_000521533.1,SO:0001217,UniParc:UPI0000054B14,UniRef:UniRef100_Q2FZR7,UniRef:UniRef50_Q2FZR7,UniRef:UniRef90_Q2FZR7
contig_1	Pyrodigal	gene	993039	994109	.	+	.	ID=GCA000560365_00955_gene;locus_tag=GCA000560365_00955;gene=opp3C
contig_1	Pyrodigal	CDS	993039	994109	.	+	0	ID=GCA000560365_00955;Name=oligopeptide ABC transporter permease;locus_tag=GCA000560365_00955;product=oligopeptide ABC transporter permease;Dbxref=GO:0043190,GO:0140359;gene=opp3C;Parent=GCA000560365_00955_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1173,COG:EP,RefSeq:WP_000829632.1,SO:0001217,UniParc:UPI0000054B13,UniRef:UniRef100_Q2FZR6,UniRef:UniRef50_B9DIT6,UniRef:UniRef90_Q2FZR6
contig_1	Pyrodigal	gene	994126	995208	.	+	.	ID=GCA000560365_00956_gene;locus_tag=GCA000560365_00956;gene=dppD
contig_1	Pyrodigal	CDS	994126	995208	.	+	0	ID=GCA000560365_00956;Name=ABC transporter domain-containing protein;locus_tag=GCA000560365_00956;product=ABC transporter domain-containing protein;gene=dppD;Parent=GCA000560365_00956_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0444,COG:EP,RefSeq:WP_000140050.1,SO:0001217,UniParc:UPI0000054B12,UniRef:UniRef100_Q2FZR5,UniRef:UniRef50_A0A1E9VQX6,UniRef:UniRef90_Q2FZR5
contig_1	Pyrodigal	gene	995198	996139	.	+	.	ID=GCA000560365_00957_gene;locus_tag=GCA000560365_00957;gene=oppF
contig_1	Pyrodigal	CDS	995198	996139	.	+	0	ID=GCA000560365_00957;Name=Oligopeptide transport ATP-binding protein oppF;locus_tag=GCA000560365_00957;product=Oligopeptide transport ATP-binding protein oppF;gene=oppF;Parent=GCA000560365_00957_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0444,COG:EP,RefSeq:WP_000786734.1,SO:0001217,UniParc:UPI0000054B11,UniRef:UniRef100_Q2FZR4,UniRef:UniRef50_A0A091C226,UniRef:UniRef90_A0A2X2MUC1
contig_1	Pyrodigal	gene	996158	997813	.	+	.	ID=GCA000560365_00958_gene;locus_tag=GCA000560365_00958;gene=oppA
contig_1	Pyrodigal	CDS	996158	997813	.	+	0	ID=GCA000560365_00958;Name=Oligopeptide ABC transporter%2C periplasmic oligopeptide-binding protein oppA;locus_tag=GCA000560365_00958;product=Oligopeptide ABC transporter%2C periplasmic oligopeptide-binding protein oppA;gene=oppA;Parent=GCA000560365_00958_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4166,COG:E,KEGG:K15580,RefSeq:WP_000197019.1,SO:0001217,UniParc:UPI0000054B10,UniRef:UniRef100_Q2FZR3,UniRef:UniRef50_S2XM61,UniRef:UniRef90_A0A166IYH7
contig_1	Pyrodigal	gene	998025	999740	.	+	.	ID=GCA000560365_00959_gene;locus_tag=GCA000560365_00959;gene=opp4A
contig_1	Pyrodigal	CDS	998025	999740	.	+	0	ID=GCA000560365_00959;Name=oligopeptide ABC transporter substrate-binding protein;locus_tag=GCA000560365_00959;product=oligopeptide ABC transporter substrate-binding protein;Dbxref=GO:0043190,GO:0140359;gene=opp4A;Parent=GCA000560365_00959_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0747,COG:E,RefSeq:WP_000517187.1,SO:0001217,UniParc:UPI00004B5B89,UniRef:UniRef100_A0A0E7NMJ6,UniRef:UniRef50_B9DPB0,UniRef:UniRef90_A0A0E7NMJ6
contig_1	Pyrodigal	gene	999791	1000777	.	+	.	ID=GCA000560365_00960_gene;locus_tag=GCA000560365_00960;gene=dppD
contig_1	Pyrodigal	CDS	999791	1000777	.	+	0	ID=GCA000560365_00960;Name=Oligopeptide ABC transporter (ATP-binding protein);locus_tag=GCA000560365_00960;product=Oligopeptide ABC transporter (ATP-binding protein);gene=dppD;Parent=GCA000560365_00960_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0444,COG:EP,RefSeq:WP_001067049.1,SO:0001217,UniParc:UPI0000696C01,UniRef:UniRef100_A0A5A8VG60,UniRef:UniRef50_A0A8T7JET3,UniRef:UniRef90_A0A0U1MIN3
contig_1	Pyrodigal	gene	1000780	1001760	.	+	.	ID=GCA000560365_00961_gene;locus_tag=GCA000560365_00961;gene=dppD
contig_1	Pyrodigal	CDS	1000780	1001760	.	+	0	ID=GCA000560365_00961;Name=Dipeptide ABC transporter ATP-binding protein;locus_tag=GCA000560365_00961;product=Dipeptide ABC transporter ATP-binding protein;gene=dppD;Parent=GCA000560365_00961_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0444,COG:EP,RefSeq:WP_000427770.1,SO:0001217,UniParc:UPI0000054B0C,UniRef:UniRef100_Q2FZR0,UniRef:UniRef50_A0A150KNE3,UniRef:UniRef90_A0A389Q283
contig_1	Pyrodigal	gene	1001753	1002715	.	+	.	ID=GCA000560365_00962_gene;locus_tag=GCA000560365_00962;gene=opp4B
contig_1	Pyrodigal	CDS	1001753	1002715	.	+	0	ID=GCA000560365_00962;Name=oligopeptide ABC transporter permease;locus_tag=GCA000560365_00962;product=oligopeptide ABC transporter permease;Dbxref=GO:0043190,GO:0140359;gene=opp4B;Parent=GCA000560365_00962_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0601,COG:EP,RefSeq:WP_000593417.1,SO:0001217,UniParc:UPI0000054B0B,UniRef:UniRef100_Q2FZQ9,UniRef:UniRef50_S2XU22,UniRef:UniRef90_A0A0U1MIX6
contig_1	Pyrodigal	gene	1002727	1003608	.	+	.	ID=GCA000560365_00963_gene;locus_tag=GCA000560365_00963;gene=opp4C
contig_1	Pyrodigal	CDS	1002727	1003608	.	+	0	ID=GCA000560365_00963;Name=oligopeptide ABC transporter permease;locus_tag=GCA000560365_00963;product=oligopeptide ABC transporter permease;Dbxref=GO:0043190,GO:0140359;gene=opp4C;Parent=GCA000560365_00963_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1173,COG:EP,RefSeq:WP_001180262.1,SO:0001217,UniParc:UPI0000054B0A,UniRef:UniRef100_Q2FZQ8,UniRef:UniRef50_A0A075RFR8,UniRef:UniRef90_A0A8G2HYR2
contig_1	Pyrodigal	gene	1003650	1004639	.	-	.	ID=GCA000560365_00964_gene;locus_tag=GCA000560365_00964;gene=trpS
contig_1	Pyrodigal	CDS	1003650	1004639	.	-	0	ID=GCA000560365_00964;Name=tryptophan--tRNA ligase;locus_tag=GCA000560365_00964;product=tryptophan--tRNA ligase;Dbxref=GO:0000166,GO:0004830,GO:0005524,GO:0005829,GO:0006436;gene=trpS;Parent=GCA000560365_00964_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0180,COG:J,RefSeq:WP_000448934.1,SO:0001217,UniParc:UPI000002E8EF,UniRef:UniRef100_Q5HH88,UniRef:UniRef50_P21656,UniRef:UniRef90_Q5HH88;ec_number=6.1.1.2
contig_1	Pyrodigal	gene	1004934	1005329	.	+	.	ID=GCA000560365_00965_gene;locus_tag=GCA000560365_00965;gene=spxA
contig_1	Pyrodigal	CDS	1004934	1005329	.	+	0	ID=GCA000560365_00965;Name=transcriptional regulator SpxA;locus_tag=GCA000560365_00965;product=transcriptional regulator SpxA;Dbxref=GO:0005737,GO:0045892;gene=spxA;Parent=GCA000560365_00965_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1393,COG:P,KEGG:K16509,RefSeq:WP_000258003.1,SO:0001217,UniParc:UPI00000D77A6,UniRef:UniRef100_Q2G1U6,UniRef:UniRef50_O31602,UniRef:UniRef90_Q2G1U6
contig_1	Pyrodigal	gene	1005700	1006419	.	+	.	ID=GCA000560365_00966_gene;locus_tag=GCA000560365_00966;gene=mecA
contig_1	Pyrodigal	CDS	1005700	1006419	.	+	0	ID=GCA000560365_00966;Name=adaptor protein MecA;locus_tag=GCA000560365_00966;product=adaptor protein MecA;Dbxref=GO:0030674;gene=mecA;Parent=GCA000560365_00966_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4862,COG:KTN,RefSeq:WP_001217730.1,SO:0001217,UniParc:UPI0000054B08,UniRef:UniRef100_Q2G1U5,UniRef:UniRef50_P60184,UniRef:UniRef90_P60184
contig_1	Pyrodigal	gene	1006540	1006797	.	+	.	ID=GCA000560365_00967_gene;locus_tag=GCA000560365_00967;gene=coiA
contig_1	Pyrodigal	CDS	1006540	1006797	.	+	0	ID=GCA000560365_00967;Name=Competence protein CoiA;locus_tag=GCA000560365_00967;product=Competence protein CoiA;gene=coiA;Parent=GCA000560365_00967_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4469,COG:R,SO:0001217,UniParc:UPI0000696C02,UniRef:UniRef100_A0A0E8G9A9,UniRef:UniRef50_Q2G1U4,UniRef:UniRef90_Q2G1U4
contig_1	Pyrodigal	gene	1006911	1007525	.	+	.	ID=GCA000560365_00968_gene;locus_tag=GCA000560365_00968;gene=coiA
contig_1	Pyrodigal	CDS	1006911	1007525	.	+	0	ID=GCA000560365_00968;Name=Competence protein CoiA;locus_tag=GCA000560365_00968;product=Competence protein CoiA;gene=coiA;Parent=GCA000560365_00968_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4469,COG:R,SO:0001217,UniParc:UPI000169900F,UniRef:UniRef100_Q2G1U4,UniRef:UniRef50_Q2G1U4,UniRef:UniRef90_Q2G1U4
contig_1	Pyrodigal	gene	1007573	1009381	.	+	.	ID=GCA000560365_00969_gene;locus_tag=GCA000560365_00969;gene=pepF
contig_1	Pyrodigal	CDS	1007573	1009381	.	+	0	ID=GCA000560365_00969;Name=oligoendopeptidase F;locus_tag=GCA000560365_00969;product=oligoendopeptidase F;Dbxref=GO:0004222,GO:0006508;gene=pepF;Parent=GCA000560365_00969_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1164,COG:E,KEGG:K08602,RefSeq:WP_000082731.1,SO:0001217,UniParc:UPI0000054B06,UniRef:UniRef100_Q2G1U3,UniRef:UniRef50_O31605,UniRef:UniRef90_A0A0D1I4D2;ec_number=3.4.24.-
contig_1	Infernal	gene	1009481	1009578	.	+	.	ID=GCA000560365_00970_gene;locus_tag=GCA000560365_00970;gene=rsaE
contig_1	Infernal	ncRNA	1009481	1009578	1.1e-15	+	.	ID=GCA000560365_00970;Name=RNA Staph. aureus E (RoxS);locus_tag=GCA000560365_00970;gene=rsaE;product=RNA Staph. aureus E (RoxS);Dbxref=RFAM:RF01820;Parent=GCA000560365_00970_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01820
contig_1	Infernal	gene	1009544	1009662	.	+	.	ID=GCA000560365_00971_gene;locus_tag=GCA000560365_00971;gene=rsaF
contig_1	Infernal	ncRNA	1009544	1009662	2.3e-23	+	.	ID=GCA000560365_00971;Name=RNA Staph. aureus F;locus_tag=GCA000560365_00971;gene=rsaF;product=RNA Staph. aureus F;Dbxref=RFAM:RF01858;Parent=GCA000560365_00971_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01858
contig_1	Pyrodigal	gene	1009841	1010647	.	-	.	ID=GCA000560365_00972_gene;locus_tag=GCA000560365_00972;gene=yjbH
contig_1	Pyrodigal	CDS	1009841	1010647	.	-	0	ID=GCA000560365_00972;Name=protease adaptor protein YjbH;locus_tag=GCA000560365_00972;product=protease adaptor protein YjbH;Dbxref=GO:0005737;gene=yjbH;Parent=GCA000560365_00972_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000896697,BlastRules:WP_014614367,COG:COG2761,COG:O,RefSeq:WP_000896697.1,SO:0001217,UniParc:UPI0000054B04,UniRef:UniRef100_Q2G203,UniRef:UniRef50_Q2G203,UniRef:UniRef90_Q2G203
contig_1	Pyrodigal	gene	1010670	1011035	.	-	.	ID=GCA000560365_00973_gene;locus_tag=GCA000560365_00973;gene=yjbI
contig_1	Pyrodigal	CDS	1010670	1011035	.	-	0	ID=GCA000560365_00973;Name=truncated hemoglobin YjbI;locus_tag=GCA000560365_00973;product=truncated hemoglobin YjbI;gene=yjbI;Parent=GCA000560365_00973_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000214067,BlastRules:WP_019167281,RefSeq:WP_000214075.1,SO:0001217,UniParc:UPI0000696C04,UniRef:UniRef100_A0A1S5YUB0,UniRef:UniRef50_Q2G202,UniRef:UniRef90_Q2G202
contig_1	Pyrodigal	gene	1011139	1011732	.	-	.	ID=GCA000560365_00974_gene;locus_tag=GCA000560365_00974;gene=yjbK
contig_1	Pyrodigal	CDS	1011139	1011732	.	-	0	ID=GCA000560365_00974;Name=CYTH domain-containing protein;locus_tag=GCA000560365_00974;product=CYTH domain-containing protein;gene=yjbK;Parent=GCA000560365_00974_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4116,COG:R,RefSeq:WP_000224622.1,SO:0001217,UniParc:UPI0000054B02,UniRef:UniRef100_Q2G201,UniRef:UniRef50_Q2G201,UniRef:UniRef90_Q2G201
contig_1	Pyrodigal	gene	1011918	1012265	.	+	.	ID=GCA000560365_00975_gene;locus_tag=GCA000560365_00975
contig_1	Pyrodigal	CDS	1011918	1012265	.	+	0	ID=GCA000560365_00975;Name=UPF0738 protein SAS0874;locus_tag=GCA000560365_00975;product=UPF0738 protein SAS0874;Parent=GCA000560365_00975_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001242102.1,SO:0001217,UniParc:UPI00000D9D4A,UniRef:UniRef100_Q2G200,UniRef:UniRef50_Q2G200,UniRef:UniRef90_Q2G200
contig_1	Pyrodigal	gene	1012282	1012917	.	+	.	ID=GCA000560365_00976_gene;locus_tag=GCA000560365_00976;gene=yjbM
contig_1	Pyrodigal	CDS	1012282	1012917	.	+	0	ID=GCA000560365_00976;Name=GTP pyrophosphokinase;locus_tag=GCA000560365_00976;product=GTP pyrophosphokinase;gene=yjbM;Parent=GCA000560365_00976_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2357,COG:FT,RefSeq:WP_001077683.1,SO:0001217,UniParc:UPI0000054B00,UniRef:UniRef100_Q2G204,UniRef:UniRef50_O31611,UniRef:UniRef90_A0A380G3W5
contig_1	Pyrodigal	gene	1012934	1013743	.	+	.	ID=GCA000560365_00977_gene;locus_tag=GCA000560365_00977;gene=nadK
contig_1	Pyrodigal	CDS	1012934	1013743	.	+	0	ID=GCA000560365_00977;Name=NAD kinase;locus_tag=GCA000560365_00977;product=NAD kinase;Dbxref=GO:0003951,GO:0005524,GO:0005737,GO:0006741,GO:0019674,GO:0046872,GO:0051287;gene=nadK;Parent=GCA000560365_00977_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0061,COG:H,KEGG:K00858,RefSeq:WP_001270834.1,SO:0001217,UniParc:UPI0000054AFF,UniRef:UniRef100_Q2G1Z9,UniRef:UniRef50_Q8Y8D7,UniRef:UniRef90_Q2G1Z9;ec_number=2.7.1.23
contig_1	Pyrodigal	gene	1013740	1014594	.	+	.	ID=GCA000560365_00978_gene;locus_tag=GCA000560365_00978;gene=rluA
contig_1	Pyrodigal	CDS	1013740	1014594	.	+	0	ID=GCA000560365_00978;Name=Ribosomal large subunit pseudouridine synthase D;locus_tag=GCA000560365_00978;product=Ribosomal large subunit pseudouridine synthase D;gene=rluA;Parent=GCA000560365_00978_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0564,COG:J,RefSeq:WP_000669939.1,SO:0001217,UniParc:UPI0000054AFE,UniRef:UniRef100_Q2FZQ6,UniRef:UniRef50_A0A380CJ34,UniRef:UniRef90_A0A390AE29
contig_1	Pyrodigal	gene	1014615	1016000	.	+	.	ID=GCA000560365_00979_gene;locus_tag=GCA000560365_00979;gene=mgtE
contig_1	Pyrodigal	CDS	1014615	1016000	.	+	0	ID=GCA000560365_00979;Name=magnesium transporter;locus_tag=GCA000560365_00979;product=magnesium transporter;Dbxref=GO:0015095,GO:0015693,GO:0016020;gene=mgtE;Parent=GCA000560365_00979_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2239,COG:P,RefSeq:WP_000062417.1,SO:0001217,UniParc:UPI0000054AFD,UniRef:UniRef100_Q2FZQ5,UniRef:UniRef50_A0A2T4SE99,UniRef:UniRef90_A0A0D1GXI3
contig_1	Pyrodigal	gene	1016010	1017854	.	+	.	ID=GCA000560365_00980_gene;locus_tag=GCA000560365_00980;gene=trkA
contig_1	Pyrodigal	CDS	1016010	1017854	.	+	0	ID=GCA000560365_00980;Name=Sodium:proton antiporter;locus_tag=GCA000560365_00980;product=Sodium:proton antiporter;gene=trkA;Parent=GCA000560365_00980_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0569,COG:PT,RefSeq:WP_000395153.1,SO:0001217,UniParc:UPI0000054AFC,UniRef:UniRef100_Q2FZQ4,UniRef:UniRef50_O31615,UniRef:UniRef90_Q2FZQ4
contig_1	Pyrodigal	gene	1018132	1018902	.	+	.	ID=GCA000560365_00981_gene;locus_tag=GCA000560365_00981;gene=fabI
contig_1	Pyrodigal	CDS	1018132	1018902	.	+	0	ID=GCA000560365_00981;Name=enoyl-ACP reductase FabI;locus_tag=GCA000560365_00981;product=enoyl-ACP reductase FabI;Dbxref=GO:0004318,GO:0006633,GO:0030497,GO:0042802,GO:0050661,GO:0141148;gene=fabI;Parent=GCA000560365_00981_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0623,COG:I,RefSeq:WP_000933195.1,SO:0001217,UniParc:UPI00000D774F,UniRef:UniRef100_Q6GI75,UniRef:UniRef50_Q2FZQ3,UniRef:UniRef90_Q2FZQ3;ec_number=1.3.1.39
contig_1	Pyrodigal	gene	1019097	1020182	.	-	.	ID=GCA000560365_00982_gene;locus_tag=GCA000560365_00982;gene=perM
contig_1	Pyrodigal	CDS	1019097	1020182	.	-	0	ID=GCA000560365_00982;Name=AI-2E family transporter;locus_tag=GCA000560365_00982;product=AI-2E family transporter;gene=perM;Parent=GCA000560365_00982_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0628,COG:R,RefSeq:WP_000933105.1,SO:0001217,UniParc:UPI0000054AF9,UniRef:UniRef100_Q2FZQ2,UniRef:UniRef50_Q2FZQ2,UniRef:UniRef90_Q2FZQ2
contig_1	Pyrodigal	gene	1020524	1022092	.	+	.	ID=GCA000560365_00983_gene;locus_tag=GCA000560365_00983;gene=alsT
contig_1	Pyrodigal	CDS	1020524	1022092	.	+	0	ID=GCA000560365_00983;Name=Alanine:cation symporter family protein;locus_tag=GCA000560365_00983;product=Alanine:cation symporter family protein;gene=alsT;Parent=GCA000560365_00983_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1115,COG:E,KEGG:K03310,RefSeq:WP_000570699.1,SO:0001217,UniParc:UPI00004B5B8C,UniRef:UniRef100_A0A0H3K7V2,UniRef:UniRef50_A0A6N3F963,UniRef:UniRef90_Q2FZQ1
contig_1	Pyrodigal	gene	1022234	1022992	.	+	.	ID=GCA000560365_00984_gene;locus_tag=GCA000560365_00984;gene=fes
contig_1	Pyrodigal	CDS	1022234	1022992	.	+	0	ID=GCA000560365_00984;Name=Esterase family protein;locus_tag=GCA000560365_00984;product=Esterase family protein;gene=fes;Parent=GCA000560365_00984_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2382,COG:P,RefSeq:WP_001288681.1,SO:0001217,UniParc:UPI0000054AF7,UniRef:UniRef100_Q2FZQ0,UniRef:UniRef50_Q2FZQ0,UniRef:UniRef90_Q2FZQ0
contig_1	Pyrodigal	gene	1023186	1023695	.	+	.	ID=GCA000560365_00985_gene;locus_tag=GCA000560365_00985;gene=thpR
contig_1	Pyrodigal	CDS	1023186	1023695	.	+	0	ID=GCA000560365_00985;Name=Putative phosphoesterase SA0873;locus_tag=GCA000560365_00985;product=Putative phosphoesterase SA0873;Dbxref=GO:0016788;gene=thpR;Parent=GCA000560365_00985_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1514,COG:J,RefSeq:WP_000600392.1,SO:0001217,UniParc:UPI0000054AF6,UniRef:UniRef100_Q2FZP9,UniRef:UniRef50_Q2FZP9,UniRef:UniRef90_Q2FZP9;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	1023808	1024998	.	-	.	ID=GCA000560365_00986_gene;locus_tag=GCA000560365_00986;gene=ltaA
contig_1	Pyrodigal	CDS	1023808	1024998	.	-	0	ID=GCA000560365_00986;Name=lipoteichoic acid biosynthesis MFS flippase LtaA;locus_tag=GCA000560365_00986;product=lipoteichoic acid biosynthesis MFS flippase LtaA;Dbxref=GO:0005886,GO:0006869,GO:0015297,GO:0070395,GO:0140327;gene=ltaA;Parent=GCA000560365_00986_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2814,COG:G,RefSeq:WP_001154222.1,SO:0001217,UniParc:UPI00004B5B8D,UniRef:UniRef100_Q2FZP8,UniRef:UniRef50_Q2FZP8,UniRef:UniRef90_Q2FZP8
contig_1	Pyrodigal	gene	1024976	1026151	.	-	.	ID=GCA000560365_00987_gene;locus_tag=GCA000560365_00987;gene=ugtP
contig_1	Pyrodigal	CDS	1024976	1026151	.	-	0	ID=GCA000560365_00987;Name=diglucosyl diacylglycerol synthase;locus_tag=GCA000560365_00987;product=diglucosyl diacylglycerol synthase;Dbxref=GO:0005886,GO:0009246,GO:0009247,GO:0047228,GO:0070395;gene=ugtP;Parent=GCA000560365_00987_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0707,COG:M,RefSeq:WP_000258650.1,SO:0001217,UniParc:UPI0000054AF4,UniRef:UniRef100_Q2FZP7,UniRef:UniRef50_Q2FZP7,UniRef:UniRef90_Q2FZP7;ec_number=2.4.1.315
contig_1	Pyrodigal	gene	1026584	1028065	.	+	.	ID=GCA000560365_00988_gene;locus_tag=GCA000560365_00988;gene=murE
contig_1	Pyrodigal	CDS	1026584	1028065	.	+	0	ID=GCA000560365_00988;Name=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase;locus_tag=GCA000560365_00988;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase;Dbxref=GO:0000287,GO:0005524,GO:0005737,GO:0008360,GO:0009252,GO:0047482,GO:0051301,GO:0071555;gene=murE;Parent=GCA000560365_00988_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0769,COG:M,KEGG:K01928,RefSeq:WP_000340118.1,SO:0001217,UniParc:UPI00004B5B8E,UniRef:UniRef100_Q2FZP6,UniRef:UniRef50_Q2FZP6,UniRef:UniRef90_Q2FZP6;ec_number=6.3.2.7
contig_1	Pyrodigal	gene	1028058	1028309	.	+	.	ID=GCA000560365_00989_gene;locus_tag=GCA000560365_00989
contig_1	Pyrodigal	CDS	1028058	1028309	.	+	0	ID=GCA000560365_00989;Name=YueH-like family protein;locus_tag=GCA000560365_00989;product=YueH-like family protein;Parent=GCA000560365_00989_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000608862.1,SO:0001217,UniParc:UPI00000CAC3F,UniRef:UniRef100_W8URU9,UniRef:UniRef50_Q2FZP5,UniRef:UniRef90_Q2FZP5
contig_1	Pyrodigal	gene	1028309	1029871	.	+	.	ID=GCA000560365_00990_gene;locus_tag=GCA000560365_00990;gene=prfC
contig_1	Pyrodigal	CDS	1028309	1029871	.	+	0	ID=GCA000560365_00990;Name=peptide chain release factor 3;locus_tag=GCA000560365_00990;product=peptide chain release factor 3;Dbxref=GO:0003924,GO:0005525,GO:0005829,GO:0006415,GO:0006449,GO:0016149,GO:0016150;gene=prfC;Parent=GCA000560365_00990_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4108,COG:J,KEGG:K02837,RefSeq:WP_001049959.1,SO:0001217,UniParc:UPI0000054AF1,UniRef:UniRef100_Q2FZP4,UniRef:UniRef50_Q8Y8C0,UniRef:UniRef90_Q2FZP4
contig_1	Infernal	regulatory_region	1029991	1030098	4.3e-10	+	.	ID=KMHODOBJJH_188;Name=Manganese Mn2+ riboswitch aptamer (yybP-ykoY);product=Manganese Mn2+ riboswitch aptamer (yybP-ykoY);Dbxref=RFAM:RF00080;inference=profile:Rfam:RF00080;Note=SO:0000035;regulatory_class=riboswitch
contig_1	Pyrodigal	gene	1030173	1030976	.	+	.	ID=GCA000560365_00991_gene;locus_tag=GCA000560365_00991;gene=terC
contig_1	Pyrodigal	CDS	1030173	1030976	.	+	0	ID=GCA000560365_00991;Name=TerC family protein;locus_tag=GCA000560365_00991;product=TerC family protein;gene=terC;Parent=GCA000560365_00991_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0861,COG:P,RefSeq:WP_000928413.1,SO:0001217,UniParc:UPI00000CABC2,UniRef:UniRef100_Q2FZP3,UniRef:UniRef50_O34997,UniRef:UniRef90_Q2FZP3
contig_1	Pyrodigal	gene	1031210	1033519	.	+	.	ID=GCA000560365_00992_gene;locus_tag=GCA000560365_00992;gene=degQ
contig_1	Pyrodigal	CDS	1031210	1033519	.	+	0	ID=GCA000560365_00992;Name=Serine protease HtrA-like;locus_tag=GCA000560365_00992;product=Serine protease HtrA-like;Dbxref=GO:0004252,GO:0005886,GO:0006508;gene=degQ;Parent=GCA000560365_00992_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0265,COG:O,SO:0001217,UniParc:UPI0000696C06,UniRef:UniRef100_Q2FI55,UniRef:UniRef50_Q2FZP2,UniRef:UniRef90_Q2FZP2;ec_number=3.4.21.-
contig_1	Pyrodigal	gene	1033536	1034894	.	+	.	ID=GCA000560365_00993_gene;locus_tag=GCA000560365_00993;gene=trkG
contig_1	Pyrodigal	CDS	1033536	1034894	.	+	0	ID=GCA000560365_00993;Name=K+-transporting ATPase;locus_tag=GCA000560365_00993;product=K+-transporting ATPase;gene=trkG;Parent=GCA000560365_00993_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0168,COG:P,RefSeq:WP_031808142.1,SO:0001217,UniParc:UPI00044B74DE,UniRef:UniRef100_UPI00044B74DE,UniRef:UniRef50_O31658,UniRef:UniRef90_A0A7U7JTZ2
contig_1	Pyrodigal	gene	1035030	1036544	.	+	.	ID=GCA000560365_00994_gene;locus_tag=GCA000560365_00994;gene=ushA
contig_1	Pyrodigal	CDS	1035030	1036544	.	+	0	ID=GCA000560365_00994;Name=5'-Nucleotidase C-terminal domain-containing protein;locus_tag=GCA000560365_00994;product=5'-Nucleotidase C-terminal domain-containing protein;gene=ushA;Parent=GCA000560365_00994_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0737,COG:FV,SO:0001217,UniParc:UPI0000054AEC,UniRef:UniRef100_Q2FZP0,UniRef:UniRef50_A0A380G340,UniRef:UniRef90_Q2FZP0
contig_1	tRNAscan-SE	gene	1036724	1036812	.	-	.	ID=GCA000560365_00995_gene;locus_tag=GCA000560365_00995;gene=trnS
contig_1	tRNAscan-SE	tRNA	1036724	1036812	.	-	.	ID=GCA000560365_00995;Name=tRNA-Ser(gct);locus_tag=GCA000560365_00995;product=tRNA-Ser(gct);gene=trnS;anti_codon=gct;amino_acid=Ser;Parent=GCA000560365_00995_gene;inference=profile:tRNAscan:2.0;Note=SO:0000269
contig_1	tRNAscan-SE	gene	1036815	1036889	.	-	.	ID=GCA000560365_00996_gene;locus_tag=GCA000560365_00996;gene=trnN
contig_1	tRNAscan-SE	tRNA	1036815	1036889	.	-	.	ID=GCA000560365_00996;Name=tRNA-Asn(gtt);locus_tag=GCA000560365_00996;product=tRNA-Asn(gtt);gene=trnN;anti_codon=gtt;amino_acid=Asn;Parent=GCA000560365_00996_gene;inference=profile:tRNAscan:2.0;Note=SO:0000257
contig_1	Pyrodigal	gene	1037031	1037600	.	-	.	ID=GCA000560365_00997_gene;locus_tag=GCA000560365_00997;gene=comK
contig_1	Pyrodigal	CDS	1037031	1037600	.	-	0	ID=GCA000560365_00997;Name=Competence protein ComK;locus_tag=GCA000560365_00997;product=Competence protein ComK;gene=comK;Parent=GCA000560365_00997_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4903,COG:K,RefSeq:WP_000287265.1,SO:0001217,UniParc:UPI00000D7742,UniRef:UniRef100_Q2FZN9,UniRef:UniRef50_Q2FZN9,UniRef:UniRef90_Q2FZN9
contig_1	Pyrodigal	gene	1037810	1038028	.	+	.	ID=GCA000560365_00998_gene;locus_tag=GCA000560365_00998
contig_1	Pyrodigal	CDS	1037810	1038028	.	+	0	ID=GCA000560365_00998;Name=IDEAL domain-containing protein;locus_tag=GCA000560365_00998;product=IDEAL domain-containing protein;Parent=GCA000560365_00998_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000876826.1,SO:0001217,UniParc:UPI00000D7696,UniRef:UniRef100_Q2FZN8,UniRef:UniRef50_Q2FZN8,UniRef:UniRef90_Q2FZN8
contig_1	Pyrodigal	gene	1038109	1039095	.	-	.	ID=GCA000560365_00999_gene;locus_tag=GCA000560365_00999;gene=lplA
contig_1	Pyrodigal	CDS	1038109	1039095	.	-	0	ID=GCA000560365_00999;Name=Lipoate--protein ligase 1;locus_tag=GCA000560365_00999;product=Lipoate--protein ligase 1;Dbxref=GO:0005524,GO:0005737,GO:0009249,GO:0016979,GO:0017118;gene=lplA;Parent=GCA000560365_00999_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0095,COG:H,KEGG:K03800,RefSeq:WP_000668820.1,SO:0001217,UniParc:UPI0000054AE9,UniRef:UniRef100_Q2FZN7,UniRef:UniRef50_O07608,UniRef:UniRef90_A0A0H3JR16;ec_number=6.3.1.20
contig_1	Pyrodigal	gene	1039294	1039470	.	+	.	ID=GCA000560365_01000_gene;locus_tag=GCA000560365_01000;gene=ykvS
contig_1	Pyrodigal	CDS	1039294	1039470	.	+	0	ID=GCA000560365_01000;Name=DUF2187 domain-containing protein;locus_tag=GCA000560365_01000;product=DUF2187 domain-containing protein;gene=ykvS;Parent=GCA000560365_01000_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4873,COG:S,RefSeq:WP_000214898.1,SO:0001217,UniParc:UPI0000054AE8,UniRef:UniRef100_Q2FZN6,UniRef:UniRef50_Q2FZN6,UniRef:UniRef90_Q2FZN6
contig_1	Pyrodigal	gene	1039485	1040087	.	+	.	ID=GCA000560365_01001_gene;locus_tag=GCA000560365_01001
contig_1	Pyrodigal	CDS	1039485	1040087	.	+	0	ID=GCA000560365_01001;Name=CPBP family intramembrane metalloprotease;locus_tag=GCA000560365_01001;product=CPBP family intramembrane metalloprotease;Parent=GCA000560365_01001_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001033867.1,SO:0001217,UniParc:UPI0000054AE7,UniRef:UniRef100_Q2FZN5,UniRef:UniRef50_Q2FZN5,UniRef:UniRef90_Q2FZN5
contig_1	Infernal	gene	1040249	1040431	.	+	.	ID=GCA000560365_01002_gene;locus_tag=GCA000560365_01002;gene=rli28
contig_1	Infernal	ncRNA	1040249	1040431	1.1e-08	+	.	ID=GCA000560365_01002;Name=Listeria sRNA rli28;locus_tag=GCA000560365_01002;product=Listeria sRNA rli28;Dbxref=RFAM:RF01492;Parent=GCA000560365_01002_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01492
contig_1	Bakta	gene	1040388	1040465	.	+	.	ID=GCA000560365_01003_gene;locus_tag=GCA000560365_01003;inference=ab initio prediction:Bakta
contig_1	Bakta	CDS	1040388	1040465	.	+	0	ID=GCA000560365_01003;Name=Holin-like toxin;locus_tag=GCA000560365_01003;product=Holin-like toxin;Parent=GCA000560365_01003_gene;Note=RefSeq:WP_099112139.1,SO:0001217,UniParc:UPI00078C946A,UniRef:UniRef100_Q2FZN4,UniRef:UniRef50_Q2FZN4,UniRef:UniRef90_Q2FZN4
contig_1	Pyrodigal	gene	1041431	1043395	.	+	.	ID=GCA000560365_01004_gene;locus_tag=GCA000560365_01004
contig_1	Pyrodigal	CDS	1041431	1043395	.	+	0	ID=GCA000560365_01004;Name=Bacteriocin-associated integral membrane family protein;locus_tag=GCA000560365_01004;product=Bacteriocin-associated integral membrane family protein;Parent=GCA000560365_01004_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4652,COG:S,RefSeq:WP_000870806.1,SO:0001217,UniParc:UPI0000054436,UniRef:UniRef100_Q2FZN2,UniRef:UniRef50_Q2FZN2,UniRef:UniRef90_Q2FZN2
contig_1	Pyrodigal	gene	1043398	1043718	.	+	.	ID=GCA000560365_01005_gene;locus_tag=GCA000560365_01005;gene=yxeA
contig_1	Pyrodigal	CDS	1043398	1043718	.	+	0	ID=GCA000560365_01005;Name=YxeA family protein;locus_tag=GCA000560365_01005;product=YxeA family protein;gene=yxeA;Parent=GCA000560365_01005_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5294,COG:S,RefSeq:WP_000668623.1,SO:0001217,UniParc:UPI00000543D0,UniRef:UniRef100_Q2FZN1,UniRef:UniRef50_G5JID0,UniRef:UniRef90_Q2FZN1
contig_1	Pyrodigal	gene	1043715	1044356	.	+	.	ID=GCA000560365_01006_gene;locus_tag=GCA000560365_01006;gene=lolD
contig_1	Pyrodigal	CDS	1043715	1044356	.	+	0	ID=GCA000560365_01006;Name=ABC transporter ATP-binding protein;locus_tag=GCA000560365_01006;product=ABC transporter ATP-binding protein;gene=lolD;Parent=GCA000560365_01006_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1136,COG:M,RefSeq:WP_000571178.1,SO:0001217,UniParc:UPI000005436D,UniRef:UniRef100_Q2FZN0,UniRef:UniRef50_A0A390FES4,UniRef:UniRef90_A0A390FES4
contig_1	Pyrodigal	gene	1044444	1044689	.	-	.	ID=GCA000560365_01007_gene;locus_tag=GCA000560365_01007
contig_1	Pyrodigal	CDS	1044444	1044689	.	-	0	ID=GCA000560365_01007;Name=Membrane protein;locus_tag=GCA000560365_01007;product=Membrane protein;Parent=GCA000560365_01007_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D76BD,UniRef:UniRef100_W8U039,UniRef:UniRef50_Q2FZM9,UniRef:UniRef90_Q2FZM9
contig_1	Pyrodigal	gene	1045013	1045300	.	+	.	ID=GCA000560365_01008_gene;locus_tag=GCA000560365_01008
contig_1	Pyrodigal	CDS	1045013	1045300	.	+	0	ID=GCA000560365_01008;Name=Phage protein;locus_tag=GCA000560365_01008;product=Phage protein;Parent=GCA000560365_01008_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000410720.1,SO:0001217,UniParc:UPI00000542A3,UniRef:UniRef100_Q2FZM8,UniRef:UniRef50_Q2FZM8,UniRef:UniRef90_Q2FZM8
contig_1	Pyrodigal	gene	1045306	1046787	.	+	.	ID=GCA000560365_01009_gene;locus_tag=GCA000560365_01009;gene=tarM
contig_1	Pyrodigal	CDS	1045306	1046787	.	+	0	ID=GCA000560365_01009;Name=Poly(ribitol-phosphate) alpha-N-acetylglucosaminyltransferase;locus_tag=GCA000560365_01009;product=Poly(ribitol-phosphate) alpha-N-acetylglucosaminyltransferase;Dbxref=GO:0005737,GO:0019350,GO:0047269,GO:0071555;gene=tarM;Parent=GCA000560365_01009_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000719184.1,SO:0001217,UniParc:UPI00004B5B95,UniRef:UniRef100_A0A0H2WWV6,UniRef:UniRef50_A0A0H2WWV6,UniRef:UniRef90_A0A0H2WWV6;ec_number=2.4.1.70
contig_1	Pyrodigal	gene	1046876	1047232	.	-	.	ID=GCA000560365_01010_gene;locus_tag=GCA000560365_01010;gene=doxX
contig_1	Pyrodigal	CDS	1046876	1047232	.	-	0	ID=GCA000560365_01010;Name=DoxX family protein;locus_tag=GCA000560365_01010;product=DoxX family protein;gene=doxX;Parent=GCA000560365_01010_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2259,COG:S,RefSeq:WP_000766009.1,SO:0001217,UniParc:UPI00000D77EC,UniRef:UniRef100_Q2FZM5,UniRef:UniRef50_Q2FZM5,UniRef:UniRef90_Q2FZM5
contig_1	Pyrodigal	gene	1047709	1048668	.	+	.	ID=GCA000560365_01011_gene;locus_tag=GCA000560365_01011;gene=fecB
contig_1	Pyrodigal	CDS	1047709	1048668	.	+	0	ID=GCA000560365_01011;Name=ABC transporter substrate-binding protein;locus_tag=GCA000560365_01011;product=ABC transporter substrate-binding protein;gene=fecB;Parent=GCA000560365_01011_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4594,COG:P,RefSeq:WP_001081351.1,SO:0001217,UniParc:UPI00000522D4,UniRef:UniRef100_W8URT6,UniRef:UniRef50_W8URT6,UniRef:UniRef90_W8URT6
contig_1	Pyrodigal	gene	1048714	1048830	.	-	.	ID=GCA000560365_01012_gene;locus_tag=GCA000560365_01012
contig_1	Pyrodigal	CDS	1048714	1048830	.	-	0	ID=GCA000560365_01012;Name=SAR1012 family small protein;locus_tag=GCA000560365_01012;product=SAR1012 family small protein;Parent=GCA000560365_01012_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001248716.1,SO:0001217,UniParc:UPI000169A1D9,UniRef:UniRef100_Q2FZM3,UniRef:UniRef50_Q2FZM3,UniRef:UniRef90_Q2FZM3
contig_1	Pyrodigal	gene	1048909	1049124	.	-	.	ID=GCA000560365_01013_gene;locus_tag=GCA000560365_01013;gene=tM2
contig_1	Pyrodigal	CDS	1048909	1049124	.	-	0	ID=GCA000560365_01013;Name=TM2 domain-containing protein;locus_tag=GCA000560365_01013;product=TM2 domain-containing protein;gene=tM2;Parent=GCA000560365_01013_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2314,COG:R,RefSeq:WP_000867357.1,SO:0001217,UniParc:UPI00000D783B,UniRef:UniRef100_Q2FZM2,UniRef:UniRef50_Q2FZM2,UniRef:UniRef90_Q2FZM2
contig_1	Pyrodigal	gene	1049289	1049840	.	+	.	ID=GCA000560365_01014_gene;locus_tag=GCA000560365_01014;gene=rimI
contig_1	Pyrodigal	CDS	1049289	1049840	.	+	0	ID=GCA000560365_01014;Name=N-acetyltransferase domain-containing protein;locus_tag=GCA000560365_01014;product=N-acetyltransferase domain-containing protein;gene=rimI;Parent=GCA000560365_01014_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0456,COG:J,RefSeq:WP_000620953.1,SO:0001217,UniParc:UPI000069AA8D,UniRef:UniRef100_Q2FZM1,UniRef:UniRef50_Q2FZM1,UniRef:UniRef90_Q2FZM1
contig_1	Pyrodigal	gene	1049892	1050830	.	-	.	ID=GCA000560365_01015_gene;locus_tag=GCA000560365_01015;gene=menA
contig_1	Pyrodigal	CDS	1049892	1050830	.	-	0	ID=GCA000560365_01015;Name=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;locus_tag=GCA000560365_01015;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;gene=menA;Parent=GCA000560365_01015_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1575,COG:H,RefSeq:WP_000070966.1,SO:0001217,UniParc:UPI00000D77C6,UniRef:UniRef100_Q2FZM0,UniRef:UniRef50_Q2FZM0,UniRef:UniRef90_Q2FZM0;ec_number=2.5.1.74
contig_1	Pyrodigal	gene	1051012	1052373	.	+	.	ID=GCA000560365_01016_gene;locus_tag=GCA000560365_01016;gene=menF
contig_1	Pyrodigal	CDS	1051012	1052373	.	+	0	ID=GCA000560365_01016;Name=isochorismate synthase;locus_tag=GCA000560365_01016;product=isochorismate synthase;gene=menF;Parent=GCA000560365_01016_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1169,COG:HQ,SO:0001217,UniParc:UPI0001D0CA69,UniRef:UniRef100_A0A1S6C6R7,UniRef:UniRef50_A0A6K1LZM7,UniRef:UniRef90_A0A0D1HF04
contig_1	Pyrodigal	gene	1052360	1054033	.	+	.	ID=GCA000560365_01017_gene;locus_tag=GCA000560365_01017;gene=menD
contig_1	Pyrodigal	CDS	1052360	1054033	.	+	0	ID=GCA000560365_01017;Name=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;locus_tag=GCA000560365_01017;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;Dbxref=GO:0000287,GO:0009234,GO:0030145,GO:0030976,GO:0070204;gene=menD;Parent=GCA000560365_01017_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1165,COG:H,KEGG:K02551,RefSeq:WP_000526687.1,SO:0001217,UniParc:UPI0000054A02,UniRef:UniRef100_Q2FZL7,UniRef:UniRef50_Q8CPQ5,UniRef:UniRef90_Q2FZL7;ec_number=2.2.1.9
contig_1	Pyrodigal	gene	1054020	1054823	.	+	.	ID=GCA000560365_01018_gene;locus_tag=GCA000560365_01018;gene=menH
contig_1	Pyrodigal	CDS	1054020	1054823	.	+	0	ID=GCA000560365_01018;Name=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;locus_tag=GCA000560365_01018;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;Dbxref=GO:0009234,GO:0070205;gene=menH;Parent=GCA000560365_01018_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0596,COG:HR,RefSeq:WP_000150195.1,SO:0001217,UniParc:UPI0000054A0D,UniRef:UniRef100_Q2FZL6,UniRef:UniRef50_A0A380H942,UniRef:UniRef90_A0A7Z7QY55;ec_number=4.2.99.20
contig_1	Pyrodigal	gene	1054816	1055637	.	+	.	ID=GCA000560365_01019_gene;locus_tag=GCA000560365_01019;gene=menB
contig_1	Pyrodigal	CDS	1054816	1055637	.	+	0	ID=GCA000560365_01019;Name=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;locus_tag=GCA000560365_01019;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;Dbxref=GO:0005829,GO:0008935,GO:0009234;gene=menB;Parent=GCA000560365_01019_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0447,COG:H,KEGG:K01661,RefSeq:WP_000184947.1,SO:0001217,UniParc:UPI0000054A17,UniRef:UniRef100_Q5HH38,UniRef:UniRef50_Q5HH38,UniRef:UniRef90_Q5HH38;ec_number=4.1.3.36
contig_1	Pyrodigal	gene	1055876	1056205	.	-	.	ID=GCA000560365_01020_gene;locus_tag=GCA000560365_01020;gene=sspC
contig_1	Pyrodigal	CDS	1055876	1056205	.	-	0	ID=GCA000560365_01020;Name=staphostatin B;locus_tag=GCA000560365_01020;product=staphostatin B;Dbxref=GO:0004869,GO:0005737;gene=sspC;Parent=GCA000560365_01020_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000284457,KEGG:K23597,RefSeq:WP_000284457.1,SO:0001217,UniParc:UPI0000054A2B,UniRef:UniRef100_Q9EYW6,UniRef:UniRef50_Q9EYW6,UniRef:UniRef90_Q9EYW6
contig_1	Pyrodigal	gene	1056243	1057424	.	-	.	ID=GCA000560365_01021_gene;locus_tag=GCA000560365_01021;gene=sspB
contig_1	Pyrodigal	CDS	1056243	1057424	.	-	0	ID=GCA000560365_01021;Name=cysteine protease staphopain B;locus_tag=GCA000560365_01021;product=cysteine protease staphopain B;Dbxref=GO:0005576,GO:0006508,GO:0008234;gene=sspB;Parent=GCA000560365_01021_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001088780,RefSeq:WP_001088780.1,SO:0001217,UniParc:UPI0000054A35,UniRef:UniRef100_Q2FZL3,UniRef:UniRef50_Q2FZL3,UniRef:UniRef90_Q2FZL3;ec_number=3.4.22.-
contig_1	Pyrodigal	gene	1057506	1058516	.	-	.	ID=GCA000560365_01022_gene;locus_tag=GCA000560365_01022;gene=sspA
contig_1	Pyrodigal	CDS	1057506	1058516	.	-	0	ID=GCA000560365_01022;Name=Glu-specific serine endopeptidase SspA;locus_tag=GCA000560365_01022;product=Glu-specific serine endopeptidase SspA;Dbxref=GO:0004252,GO:0005576,GO:0006508;gene=sspA;Parent=GCA000560365_01022_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000676549,COG:COG3591,COG:O,RefSeq:WP_000676548.1,SO:0001217,UniParc:UPI0000054A40,UniRef:UniRef100_Q2FZL2,UniRef:UniRef50_Q2FZL2,UniRef:UniRef90_Q2FZL2;ec_number=3.4.21.19
contig_1	Pyrodigal	gene	1059044	1060198	.	-	.	ID=GCA000560365_01023_gene;locus_tag=GCA000560365_01023;gene=aspB
contig_1	Pyrodigal	CDS	1059044	1060198	.	-	0	ID=GCA000560365_01023;Name=Aminotransferase;locus_tag=GCA000560365_01023;product=Aminotransferase;gene=aspB;Parent=GCA000560365_01023_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0436,COG:E,KEGG:K00841,RefSeq:WP_000777581.1,SO:0001217,UniParc:UPI00004B5B9B,UniRef:UniRef100_A0A0D6HV28,UniRef:UniRef50_Q4L550,UniRef:UniRef90_A0A0D6HV28;ec_number=2.6.1.-
contig_1	Pyrodigal	gene	1060394	1061404	.	-	.	ID=GCA000560365_01024_gene;locus_tag=GCA000560365_01024;gene=nolL
contig_1	Pyrodigal	CDS	1060394	1061404	.	-	0	ID=GCA000560365_01024;Name=Acyltransferase 3 domain-containing protein;locus_tag=GCA000560365_01024;product=Acyltransferase 3 domain-containing protein;gene=nolL;Parent=GCA000560365_01024_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3594,COG:G,RefSeq:WP_000202439.1,SO:0001217,UniParc:UPI0000054B7E,UniRef:UniRef100_Q2FZL0,UniRef:UniRef50_Q2FZL0,UniRef:UniRef90_Q2FZL0
contig_1	Pyrodigal	gene	1061557	1061976	.	+	.	ID=GCA000560365_01025_gene;locus_tag=GCA000560365_01025;gene=marR
contig_1	Pyrodigal	CDS	1061557	1061976	.	+	0	ID=GCA000560365_01025;Name=Transcriptional regulator%2C MarR family%2C putative;locus_tag=GCA000560365_01025;product=Transcriptional regulator%2C MarR family%2C putative;gene=marR;Parent=GCA000560365_01025_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1846,COG:K,RefSeq:WP_000278010.1,SO:0001217,UniParc:UPI0000696C09,UniRef:UniRef100_A0A0E8G970,UniRef:UniRef50_Q2FZK9,UniRef:UniRef90_Q2FZK9
contig_1	Pyrodigal	gene	1062183	1065953	.	-	.	ID=GCA000560365_01026_gene;locus_tag=GCA000560365_01026;gene=atl
contig_1	Pyrodigal	CDS	1062183	1065953	.	-	0	ID=GCA000560365_01026;Name=Bifunctional autolysin;locus_tag=GCA000560365_01026;product=Bifunctional autolysin;Dbxref=GO:0004040,GO:0005576,GO:0008745,GO:0009253,GO:0033925,GO:0071555;gene=atl;Parent=GCA000560365_01026_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5632,COG:M,RefSeq:WP_001074556.1,SO:0001217,UniParc:UPI0000696C0A,UniRef:UniRef100_A0A1S5YUC2,UniRef:UniRef50_P0C5Z8,UniRef:UniRef90_P0C5Z8
contig_1	Pyrodigal	gene	1066181	1066615	.	-	.	ID=GCA000560365_01027_gene;locus_tag=GCA000560365_01027;gene=elaA
contig_1	Pyrodigal	CDS	1066181	1066615	.	-	0	ID=GCA000560365_01027;Name=Putative acetyltransferase MW0937;locus_tag=GCA000560365_01027;product=Putative acetyltransferase MW0937;Dbxref=GO:0004343,GO:0016747;gene=elaA;Parent=GCA000560365_01027_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2153,COG:R,KEGG:K02348,RefSeq:WP_000491986.1,SO:0001217,UniParc:UPI0000139F7C,UniRef:UniRef100_Q5HH30,UniRef:UniRef50_Q5HH30,UniRef:UniRef90_Q5HH30;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	1066770	1067240	.	-	.	ID=GCA000560365_01028_gene;locus_tag=GCA000560365_01028
contig_1	Pyrodigal	CDS	1066770	1067240	.	-	0	ID=GCA000560365_01028;Name=osmotic stress response protein;locus_tag=GCA000560365_01028;product=osmotic stress response protein;Parent=GCA000560365_01028_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000088431,RefSeq:WP_000088431.1,SO:0001217,UniParc:UPI0000054B79,UniRef:UniRef100_P0A0Q4,UniRef:UniRef50_P0A0Q4,UniRef:UniRef90_P0A0Q4
contig_1	Pyrodigal	gene	1067288	1068505	.	-	.	ID=GCA000560365_01029_gene;locus_tag=GCA000560365_01029;gene=cps2a
contig_1	Pyrodigal	CDS	1067288	1068505	.	-	0	ID=GCA000560365_01029;Name=polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase;locus_tag=GCA000560365_01029;product=polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase;gene=cps2a;Parent=GCA000560365_01029_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001031978,COG:COG1316,COG:M,KEGG:K01005,RefSeq:WP_001031975.1,SO:0001217,UniParc:UPI0000054B78,UniRef:UniRef100_P52078,UniRef:UniRef50_P52078,UniRef:UniRef90_P52078;ec_number=2.7.8.-
contig_1	Pyrodigal	gene	1068956	1070149	.	+	.	ID=GCA000560365_01030_gene;locus_tag=GCA000560365_01030;gene=fmtA
contig_1	Pyrodigal	CDS	1068956	1070149	.	+	0	ID=GCA000560365_01030;Name=teichoic acid D-Ala esterase FmtA;locus_tag=GCA000560365_01030;product=teichoic acid D-Ala esterase FmtA;Dbxref=GO:0005886,GO:0016787,GO:0046677,GO:0071555;gene=fmtA;Parent=GCA000560365_01030_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000671243,COG:COG1680,COG:V,RefSeq:WP_000671243.1,SO:0001217,UniParc:UPI0000054B77,UniRef:UniRef100_Q2FZK3,UniRef:UniRef50_Q2FZK3,UniRef:UniRef90_Q2FZK3;ec_number=3.1.1.103
contig_1	Pyrodigal	gene	1070687	1070977	.	-	.	ID=GCA000560365_01031_gene;locus_tag=GCA000560365_01031;gene=qoxD
contig_1	Pyrodigal	CDS	1070687	1070977	.	-	0	ID=GCA000560365_01031;Name=cytochrome aa3 quinol oxidase subunit IV;locus_tag=GCA000560365_01031;product=cytochrome aa3 quinol oxidase subunit IV;Dbxref=GO:0005886,GO:0009319,GO:0009486,GO:0015078,GO:0015990,GO:0016020,GO:0016682,GO:0019646,GO:0042773;gene=qoxD;Parent=GCA000560365_01031_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG3125,KEGG:K02829,SO:0001217,UniParc:UPI0000054B76,UniRef:UniRef100_Q2FZK2,UniRef:UniRef50_Q2FZK2,UniRef:UniRef90_Q2FZK2;ec_number=1.10.3.-
contig_1	Pyrodigal	gene	1070974	1071579	.	-	.	ID=GCA000560365_01032_gene;locus_tag=GCA000560365_01032;gene=qoxC
contig_1	Pyrodigal	CDS	1070974	1071579	.	-	0	ID=GCA000560365_01032;Name=cytochrome aa3 quinol oxidase subunit III;locus_tag=GCA000560365_01032;product=cytochrome aa3 quinol oxidase subunit III;Dbxref=GO:0004129,GO:0005886,GO:0009055,GO:0015078,GO:0015990,GO:0016020,GO:0016682,GO:0019646,GO:0042773;gene=qoxC;Parent=GCA000560365_01032_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1845,RefSeq:WP_000017736.1,SO:0001217,UniParc:UPI0000054B75,UniRef:UniRef100_Q2FZK1,UniRef:UniRef50_P34958,UniRef:UniRef90_Q2FZK1;ec_number=1.10.3.-
contig_1	Pyrodigal	gene	1071569	1073557	.	-	.	ID=GCA000560365_01033_gene;locus_tag=GCA000560365_01033;gene=qoxB
contig_1	Pyrodigal	CDS	1071569	1073557	.	-	0	ID=GCA000560365_01033;Name=cytochrome aa3 quinol oxidase subunit I;locus_tag=GCA000560365_01033;product=cytochrome aa3 quinol oxidase subunit I;Dbxref=GO:0004129,GO:0005507,GO:0005886,GO:0006119,GO:0015990,GO:0016020,GO:0016682,GO:0020037,GO:0022904;gene=qoxB;Parent=GCA000560365_01033_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0843,KEGG:K02827,RefSeq:WP_001010762.1,SO:0001217,UniParc:UPI0000054B74,UniRef:UniRef100_Q2FZK0,UniRef:UniRef50_E0TW66,UniRef:UniRef90_Q2FZK0;ec_number=1.10.3.-
contig_1	Pyrodigal	gene	1073557	1074657	.	-	.	ID=GCA000560365_01034_gene;locus_tag=GCA000560365_01034;gene=qoxA
contig_1	Pyrodigal	CDS	1073557	1074657	.	-	0	ID=GCA000560365_01034;Name=cytochrome aa3 quinol oxidase subunit II;locus_tag=GCA000560365_01034;product=cytochrome aa3 quinol oxidase subunit II;Dbxref=GO:0004129,GO:0005507,GO:0005886,GO:0009055,GO:0009486,GO:0015078,GO:0015990,GO:0016020,GO:0016682,GO:0042773;gene=qoxA;Parent=GCA000560365_01034_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1622,KEGG:K02826,RefSeq:WP_000032836.1,SO:0001217,UniParc:UPI00000D7857,UniRef:UniRef100_Q2FZJ9,UniRef:UniRef50_Q2FZJ9,UniRef:UniRef90_Q2FZJ9;ec_number=1.10.3.-
contig_1	Pyrodigal	gene	1075229	1075546	.	-	.	ID=GCA000560365_01035_gene;locus_tag=GCA000560365_01035
contig_1	Pyrodigal	CDS	1075229	1075546	.	-	0	ID=GCA000560365_01035;Name=Pesticidal crystal protein Cry22Aa Ig-like domain-containing protein;locus_tag=GCA000560365_01035;product=Pesticidal crystal protein Cry22Aa Ig-like domain-containing protein;Parent=GCA000560365_01035_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001037831.1,SO:0001217,UniParc:UPI0000054B71,UniRef:UniRef100_Q2FZJ7,UniRef:UniRef50_Q2FZJ7,UniRef:UniRef90_Q2FZJ7
contig_1	Pyrodigal	gene	1076351	1077211	.	-	.	ID=GCA000560365_01036_gene;locus_tag=GCA000560365_01036;gene=folD
contig_1	Pyrodigal	CDS	1076351	1077211	.	-	0	ID=GCA000560365_01036;Name=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;locus_tag=GCA000560365_01036;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;Dbxref=GO:0000105,GO:0004477,GO:0004488,GO:0005829,GO:0006164,GO:0009086,GO:0035999;gene=folD;Parent=GCA000560365_01036_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0190,COG:H,RefSeq:WP_000225837.1,SO:0001217,UniParc:UPI00000D9D65,UniRef:UniRef100_Q2FZJ6,UniRef:UniRef50_Q2FZJ6,UniRef:UniRef90_Q2FZJ6
contig_1	Pyrodigal	gene	1077412	1077894	.	+	.	ID=GCA000560365_01037_gene;locus_tag=GCA000560365_01037;gene=purE
contig_1	Pyrodigal	CDS	1077412	1077894	.	+	0	ID=GCA000560365_01037;Name=N5-carboxyaminoimidazole ribonucleotide mutase;locus_tag=GCA000560365_01037;product=N5-carboxyaminoimidazole ribonucleotide mutase;gene=purE;Parent=GCA000560365_01037_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0041,COG:F,RefSeq:WP_000861572.1,SO:0001217,UniParc:UPI00000D7728,UniRef:UniRef100_W8URR1,UniRef:UniRef50_P43849,UniRef:UniRef90_Q2FZJ5
contig_1	Pyrodigal	gene	1077881	1079005	.	+	.	ID=GCA000560365_01038_gene;locus_tag=GCA000560365_01038;gene=purK
contig_1	Pyrodigal	CDS	1077881	1079005	.	+	0	ID=GCA000560365_01038;Name=5-(carboxyamino)imidazole ribonucleotide synthase;locus_tag=GCA000560365_01038;product=5-(carboxyamino)imidazole ribonucleotide synthase;Dbxref=GO:0004638,GO:0005524,GO:0005829,GO:0006189,GO:0034028,GO:0046872;gene=purK;Parent=GCA000560365_01038_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0026,COG:F,RefSeq:WP_001010412.1,SO:0001217,UniParc:UPI0000054B6E,UniRef:UniRef100_Q5HH19,UniRef:UniRef50_Q49WI9,UniRef:UniRef90_Q99V32;ec_number=6.3.4.18
contig_1	Pyrodigal	gene	1079009	1079713	.	+	.	ID=GCA000560365_01039_gene;locus_tag=GCA000560365_01039;gene=purC
contig_1	Pyrodigal	CDS	1079009	1079713	.	+	0	ID=GCA000560365_01039;Name=phosphoribosylaminoimidazolesuccinocarboxamide synthase;locus_tag=GCA000560365_01039;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;Dbxref=GO:0004639,GO:0005524,GO:0006164,GO:0006189,GO:0009236;gene=purC;Parent=GCA000560365_01039_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0152,COG:F,RefSeq:WP_000174053.1,SO:0001217,UniParc:UPI0000054B6D,UniRef:UniRef100_Q2FZJ3,UniRef:UniRef50_Q81IQ6,UniRef:UniRef90_Q2FZJ3;ec_number=6.3.2.6
contig_1	Pyrodigal	gene	1079713	1079976	.	+	.	ID=GCA000560365_01040_gene;locus_tag=GCA000560365_01040;gene=purS
contig_1	Pyrodigal	CDS	1079713	1079976	.	+	0	ID=GCA000560365_01040;Name=phosphoribosylformylglycinamidine synthase subunit PurS;locus_tag=GCA000560365_01040;product=phosphoribosylformylglycinamidine synthase subunit PurS;gene=purS;Parent=GCA000560365_01040_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1828,COG:F,RefSeq:WP_000848350.1,SO:0001217,UniParc:UPI0000054B6B,UniRef:UniRef100_Q2FZJ2,UniRef:UniRef50_A0A239ZQS9,UniRef:UniRef90_Q2FZJ2;ec_number=6.3.5.3
contig_1	Pyrodigal	gene	1079978	1080649	.	+	.	ID=GCA000560365_01041_gene;locus_tag=GCA000560365_01041;gene=purQ
contig_1	Pyrodigal	CDS	1079978	1080649	.	+	0	ID=GCA000560365_01041;Name=phosphoribosylformylglycinamidine synthase I;locus_tag=GCA000560365_01041;product=phosphoribosylformylglycinamidine synthase I;Dbxref=GO:0004359,GO:0004642,GO:0005524,GO:0005737,GO:0006189;gene=purQ;Parent=GCA000560365_01041_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0047,COG:F,RefSeq:WP_000666799.1,SO:0001217,UniParc:UPI0000132B64,UniRef:UniRef100_Q2FZJ1,UniRef:UniRef50_P12041,UniRef:UniRef90_Q2FZJ1;ec_number=6.3.5.3
contig_1	Pyrodigal	gene	1080642	1082831	.	+	.	ID=GCA000560365_01042_gene;locus_tag=GCA000560365_01042;gene=purL
contig_1	Pyrodigal	CDS	1080642	1082831	.	+	0	ID=GCA000560365_01042;Name=phosphoribosylformylglycinamidine synthase subunit PurL;locus_tag=GCA000560365_01042;product=phosphoribosylformylglycinamidine synthase subunit PurL;Dbxref=GO:0000287,GO:0004642,GO:0005524,GO:0005737,GO:0006189;gene=purL;Parent=GCA000560365_01042_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0046,COG:F,KEGG:K23269,RefSeq:WP_000032727.1,SO:0001217,UniParc:UPI0000054B69,UniRef:UniRef100_Q2FZJ0,UniRef:UniRef50_Q2FZJ0,UniRef:UniRef90_Q2FZJ0;ec_number=6.3.5.3
contig_1	Pyrodigal	gene	1082810	1084294	.	+	.	ID=GCA000560365_01043_gene;locus_tag=GCA000560365_01043;gene=purF
contig_1	Pyrodigal	CDS	1082810	1084294	.	+	0	ID=GCA000560365_01043;Name=amidophosphoribosyltransferase;locus_tag=GCA000560365_01043;product=amidophosphoribosyltransferase;Dbxref=GO:0000287,GO:0004044,GO:0006189,GO:0009113;gene=purF;Parent=GCA000560365_01043_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0034,COG:F,KEGG:K00764,RefSeq:WP_000483713.1,SO:0001217,UniParc:UPI00000D9D67,UniRef:UniRef100_Q5HH14,UniRef:UniRef50_Q5HQA0,UniRef:UniRef90_Q5HQA0;ec_number=2.4.2.14
contig_1	Pyrodigal	gene	1084287	1085315	.	+	.	ID=GCA000560365_01044_gene;locus_tag=GCA000560365_01044;gene=purM
contig_1	Pyrodigal	CDS	1084287	1085315	.	+	0	ID=GCA000560365_01044;Name=Phosphoribosylformylglycinamidine cyclo-ligase;locus_tag=GCA000560365_01044;product=Phosphoribosylformylglycinamidine cyclo-ligase;Dbxref=GO:0004637,GO:0004641,GO:0005524,GO:0005829,GO:0006189,GO:0046084;gene=purM;Parent=GCA000560365_01044_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0150,COG:F,RefSeq:WP_000030812.1,SO:0001217,UniParc:UPI0000054B67,UniRef:UniRef100_Q2FZI8,UniRef:UniRef50_Q2FZI8,UniRef:UniRef90_Q2FZI8;ec_number=6.3.3.1
contig_1	Pyrodigal	gene	1085318	1085884	.	+	.	ID=GCA000560365_01045_gene;locus_tag=GCA000560365_01045;gene=purN
contig_1	Pyrodigal	CDS	1085318	1085884	.	+	0	ID=GCA000560365_01045;Name=phosphoribosylglycinamide formyltransferase;locus_tag=GCA000560365_01045;product=phosphoribosylglycinamide formyltransferase;Dbxref=GO:0004644,GO:0005829,GO:0006189;gene=purN;Parent=GCA000560365_01045_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0299,COG:F,RefSeq:WP_000238664.1,SO:0001217,UniParc:UPI0000054B66,UniRef:UniRef100_Q5HH12,UniRef:UniRef50_Q5HQ98,UniRef:UniRef90_P65897;ec_number=2.1.2.2
contig_1	Pyrodigal	gene	1085899	1087377	.	+	.	ID=GCA000560365_01046_gene;locus_tag=GCA000560365_01046;gene=purH
contig_1	Pyrodigal	CDS	1085899	1087377	.	+	0	ID=GCA000560365_01046;Name=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;locus_tag=GCA000560365_01046;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;Dbxref=GO:0003824,GO:0003937,GO:0004643,GO:0005829,GO:0006164,GO:0006189;gene=purH;Parent=GCA000560365_01046_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0138,COG:F,KEGG:K00602,RefSeq:WP_000709291.1,SO:0001217,UniParc:UPI0000696C0C,UniRef:UniRef100_Q2FI05,UniRef:UniRef50_P67543,UniRef:UniRef90_P67543;ec_number=3.5.4.10
contig_1	Pyrodigal	gene	1087399	1088646	.	+	.	ID=GCA000560365_01047_gene;locus_tag=GCA000560365_01047;gene=purD
contig_1	Pyrodigal	CDS	1087399	1088646	.	+	0	ID=GCA000560365_01047;Name=Phosphoribosylamine--glycine ligase;locus_tag=GCA000560365_01047;product=Phosphoribosylamine--glycine ligase;Dbxref=GO:0004637,GO:0005524,GO:0006189,GO:0009113,GO:0046872;gene=purD;Parent=GCA000560365_01047_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0151,COG:F,RefSeq:WP_001101908.1,SO:0001217,UniParc:UPI0000054B64,UniRef:UniRef100_Q2FZI5,UniRef:UniRef50_P65895,UniRef:UniRef90_P65895;ec_number=6.3.4.13
contig_1	Pyrodigal	gene	1088911	1089717	.	-	.	ID=GCA000560365_01048_gene;locus_tag=GCA000560365_01048;gene=ecfT
contig_1	Pyrodigal	CDS	1088911	1089717	.	-	0	ID=GCA000560365_01048;Name=Energy-coupling factor transporter transmembrane protein EcfT;locus_tag=GCA000560365_01048;product=Energy-coupling factor transporter transmembrane protein EcfT;gene=ecfT;Parent=GCA000560365_01048_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0619,COG:H,KEGG:K16785,RefSeq:WP_000273253.1,SO:0001217,UniParc:UPI00000CA9C8,UniRef:UniRef100_Q2FZI4,UniRef:UniRef50_S2XR66,UniRef:UniRef90_Q2FZI4
contig_1	Pyrodigal	gene	1089710	1091110	.	-	.	ID=GCA000560365_01049_gene;locus_tag=GCA000560365_01049;gene=ccmA
contig_1	Pyrodigal	CDS	1089710	1091110	.	-	0	ID=GCA000560365_01049;Name=heme ABC exporter ATP-binding protein CcmA;locus_tag=GCA000560365_01049;product=heme ABC exporter ATP-binding protein CcmA;Dbxref=GO:0015439,GO:0015886,GO:0017004,GO:0022857,GO:0043190;gene=ccmA;Parent=GCA000560365_01049_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1136,COG:M,RefSeq:WP_000921968.1,SO:0001217,UniParc:UPI00004B5B9F,UniRef:UniRef100_Q2FZI3,UniRef:UniRef50_S2XKC2,UniRef:UniRef90_Q2FZI3;ec_number=7.6.2.5
contig_1	Pyrodigal	gene	1091125	1091700	.	-	.	ID=GCA000560365_01050_gene;locus_tag=GCA000560365_01050;gene=ykoE
contig_1	Pyrodigal	CDS	1091125	1091700	.	-	0	ID=GCA000560365_01050;Name=Thiamine ABC transporter permease;locus_tag=GCA000560365_01050;product=Thiamine ABC transporter permease;gene=ykoE;Parent=GCA000560365_01050_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4721,COG:H,KEGG:K16925,RefSeq:WP_000033477.1,SO:0001217,UniParc:UPI0000054B61,UniRef:UniRef100_Q2FZI2,UniRef:UniRef50_Q2FZI2,UniRef:UniRef90_Q2FZI2
contig_1	Infernal	regulatory_region	1091777	1091877	4.4e-12	-	.	ID=KMHODOBJJH_184;Name=TPP riboswitch aptamer (THI element);product=TPP riboswitch aptamer (THI element);Dbxref=RFAM:RF00059;inference=profile:Rfam:RF00059;Note=SO:0000035;regulatory_class=riboswitch
contig_1	Pyrodigal	gene	1092284	1092418	.	-	.	ID=GCA000560365_01051_gene;locus_tag=GCA000560365_01051;gene=graF
contig_1	Pyrodigal	CDS	1092284	1092418	.	-	0	ID=GCA000560365_01051;Name=glycopeptide resistance-associated protein GraF;locus_tag=GCA000560365_01051;product=glycopeptide resistance-associated protein GraF;gene=graF;Parent=GCA000560365_01051_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000064214.1,SO:0001217,UniParc:UPI0000054B60,UniRef:UniRef100_Q2FZI0,UniRef:UniRef50_Q2FZI0,UniRef:UniRef90_Q2FZI0
contig_1	Pyrodigal	gene	1092570	1093865	.	+	.	ID=GCA000560365_01052_gene;locus_tag=GCA000560365_01052;gene=auxA
contig_1	Pyrodigal	CDS	1092570	1093865	.	+	0	ID=GCA000560365_01052;Name=lipoteichoic acid stability factor AuxA;locus_tag=GCA000560365_01052;product=lipoteichoic acid stability factor AuxA;gene=auxA;Parent=GCA000560365_01052_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000009069.1,SO:0001217,UniParc:UPI00000D775F,UniRef:UniRef100_Q2FZH9,UniRef:UniRef50_A0A1E9A5G9,UniRef:UniRef90_Q2FZH9
contig_1	Infernal	gene	1093323	1093450	.	-	.	ID=GCA000560365_01053_gene;locus_tag=GCA000560365_01053;gene=sau-59
contig_1	Infernal	ncRNA	1093323	1093450	6.5e-23	-	.	ID=GCA000560365_01053;Name=Staphylococcus sRNA sau-59;locus_tag=GCA000560365_01053;product=Staphylococcus sRNA sau-59;Dbxref=RFAM:RF02393;Parent=GCA000560365_01053_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02393
contig_1	Pyrodigal	gene	1094290	1095462	.	+	.	ID=GCA000560365_01054_gene;locus_tag=GCA000560365_01054;gene=rlmK
contig_1	Pyrodigal	CDS	1094290	1095462	.	+	0	ID=GCA000560365_01054;Name=Class I SAM-dependent rRNA methyltransferase;locus_tag=GCA000560365_01054;product=Class I SAM-dependent rRNA methyltransferase;gene=rlmK;Parent=GCA000560365_01054_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1092,COG:J,RefSeq:WP_000685079.1,SO:0001217,UniParc:UPI0000054B5E,UniRef:UniRef100_Q2FZH8,UniRef:UniRef50_Q2FZH8,UniRef:UniRef90_Q2FZH8
contig_1	Pyrodigal	gene	1095516	1096058	.	+	.	ID=GCA000560365_01055_gene;locus_tag=GCA000560365_01055
contig_1	Pyrodigal	CDS	1095516	1096058	.	+	0	ID=GCA000560365_01055;Name=DUF697 domain-containing protein;locus_tag=GCA000560365_01055;product=DUF697 domain-containing protein;Parent=GCA000560365_01055_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000505965.1,SO:0001217,UniParc:UPI0000047404,UniRef:UniRef100_Q2FZH7,UniRef:UniRef50_A0AAE5M2R9,UniRef:UniRef90_Q2FZH7
contig_1	Pyrodigal	gene	1096212	1096478	.	+	.	ID=GCA000560365_01056_gene;locus_tag=GCA000560365_01056;gene=ptsH
contig_1	Pyrodigal	CDS	1096212	1096478	.	+	0	ID=GCA000560365_01056;Name=phosphocarrier protein HPr;locus_tag=GCA000560365_01056;product=phosphocarrier protein HPr;Dbxref=GO:0005737,GO:0009401;gene=ptsH;Parent=GCA000560365_01056_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1925,COG:TG,RefSeq:WP_000437472.1,SO:0001217,UniParc:UPI00001328F8,UniRef:UniRef100_Q5HH02,UniRef:UniRef50_Q9F166,UniRef:UniRef90_Q5HH02
contig_1	Pyrodigal	gene	1096481	1098199	.	+	.	ID=GCA000560365_01057_gene;locus_tag=GCA000560365_01057;gene=ptsI
contig_1	Pyrodigal	CDS	1096481	1098199	.	+	0	ID=GCA000560365_01057;Name=Phosphoenolpyruvate-protein phosphotransferase;locus_tag=GCA000560365_01057;product=Phosphoenolpyruvate-protein phosphotransferase;Dbxref=GO:0005737,GO:0008965,GO:0009401,GO:0016301,GO:0046872;gene=ptsI;Parent=GCA000560365_01057_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1080,COG:G,RefSeq:WP_000040054.1,SO:0001217,UniParc:UPI0000054B5C,UniRef:UniRef100_Q5HH01,UniRef:UniRef50_P23533,UniRef:UniRef90_Q99V14;ec_number=2.7.3.9
contig_1	Pyrodigal	gene	1098436	1098669	.	-	.	ID=GCA000560365_01058_gene;locus_tag=GCA000560365_01058;gene=nrdH
contig_1	Pyrodigal	CDS	1098436	1098669	.	-	0	ID=GCA000560365_01058;Name=glutaredoxin-like protein NrdH;locus_tag=GCA000560365_01058;product=glutaredoxin-like protein NrdH;gene=nrdH;Parent=GCA000560365_01058_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001289614,COG:COG0695,COG:O,RefSeq:WP_001289614.1,SO:0001217,UniParc:UPI0000054B5B,UniRef:UniRef100_Q2FZH4,UniRef:UniRef50_Q2FZH4,UniRef:UniRef90_Q2FZH4
contig_1	Pyrodigal	gene	1098867	1100228	.	+	.	ID=GCA000560365_01059_gene;locus_tag=GCA000560365_01059;gene=appC
contig_1	Pyrodigal	CDS	1098867	1100228	.	+	0	ID=GCA000560365_01059;Name=Putative cytochrome bd menaquinol oxidase subunit I;locus_tag=GCA000560365_01059;product=Putative cytochrome bd menaquinol oxidase subunit I;gene=appC;Parent=GCA000560365_01059_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1271,KEGG:K00425,RefSeq:WP_000381849.1,SO:0001217,UniParc:UPI0000054B5A,UniRef:UniRef100_Q2FZH3,UniRef:UniRef50_A0A2S5D5L8,UniRef:UniRef90_A0A7U7PY91;ec_number=7.1.1.7
contig_1	Pyrodigal	gene	1100225	1101244	.	+	.	ID=GCA000560365_01060_gene;locus_tag=GCA000560365_01060;gene=appB
contig_1	Pyrodigal	CDS	1100225	1101244	.	+	0	ID=GCA000560365_01060;Name=Cytochrome d ubiquinol oxidase%2C subunit II%2C putative;locus_tag=GCA000560365_01060;product=Cytochrome d ubiquinol oxidase%2C subunit II%2C putative;gene=appB;Parent=GCA000560365_01060_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1294,KEGG:K00426,RefSeq:WP_000638456.1,SO:0001217,UniParc:UPI0000054B57,UniRef:UniRef100_Q2FZH2,UniRef:UniRef50_A0AAJ5RM05,UniRef:UniRef90_Q2FZH2;ec_number=7.1.1.7
contig_1	Pyrodigal	gene	1101377	1102039	.	+	.	ID=GCA000560365_01061_gene;locus_tag=GCA000560365_01061;gene=trkA
contig_1	Pyrodigal	CDS	1101377	1102039	.	+	0	ID=GCA000560365_01061;Name=TrkA family potassium uptake protein;locus_tag=GCA000560365_01061;product=TrkA family potassium uptake protein;gene=trkA;Parent=GCA000560365_01061_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0569,COG:PT,RefSeq:WP_000514290.1,SO:0001217,UniParc:UPI0000054B56,UniRef:UniRef100_Q2FZH1,UniRef:UniRef50_Q2FZH1,UniRef:UniRef90_Q2FZH1
contig_1	Infernal	gene	1102030	1102297	.	+	.	ID=GCA000560365_01062_gene;locus_tag=GCA000560365_01062;gene=S35
contig_1	Infernal	ncRNA	1102030	1102297	3.5e-35	+	.	ID=GCA000560365_01062;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000560365_01062;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000560365_01062_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	1102388	1104085	.	-	.	ID=GCA000560365_01063_gene;locus_tag=GCA000560365_01063;gene=rnjA
contig_1	Pyrodigal	CDS	1102388	1104085	.	-	0	ID=GCA000560365_01063;Name=ribonuclease J1;locus_tag=GCA000560365_01063;product=ribonuclease J1;Dbxref=GO:0003723,GO:0004521,GO:0004534,GO:0005737,GO:0006364,GO:0008270;gene=rnjA;Parent=GCA000560365_01063_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0595,COG:J,RefSeq:WP_000811375.1,SO:0001217,UniParc:UPI0000054B55,UniRef:UniRef100_Q2FZG9,UniRef:UniRef50_Q2FZG9,UniRef:UniRef90_Q2FZG9;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	1104085	1104303	.	-	.	ID=GCA000560365_01064_gene;locus_tag=GCA000560365_01064;gene=rpoY
contig_1	Pyrodigal	CDS	1104085	1104303	.	-	0	ID=GCA000560365_01064;Name=DNA-directed RNA polymerase subunit epsilon;locus_tag=GCA000560365_01064;product=DNA-directed RNA polymerase subunit epsilon;Dbxref=GO:0000428,GO:0001054,GO:0001055,GO:0001056,GO:0001057,GO:0001058,GO:0001066,GO:0003677;gene=rpoY;Parent=GCA000560365_01064_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5503,COG:KV,RefSeq:WP_000257888.1,SO:0001217,UniParc:UPI0000054B54,UniRef:UniRef100_Q2FZG8,UniRef:UniRef50_Q2FZG8,UniRef:UniRef90_Q2FZG8;ec_number=2.7.7.6
contig_1	Pyrodigal	gene	1104784	1105335	.	-	.	ID=GCA000560365_01065_gene;locus_tag=GCA000560365_01065;gene=def
contig_1	Pyrodigal	CDS	1104784	1105335	.	-	0	ID=GCA000560365_01065;Name=peptide deformylase;locus_tag=GCA000560365_01065;product=peptide deformylase;Dbxref=GO:0006412,GO:0036211,GO:0042586,GO:0043686,GO:0046872;gene=def;Parent=GCA000560365_01065_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0242,COG:J,KEGG:K01462,RefSeq:WP_000957036.1,SO:0001217,UniParc:UPI00000D9D72,UniRef:UniRef100_Q5HGZ3,UniRef:UniRef50_Q45495,UniRef:UniRef90_Q5HGZ3;ec_number=3.5.1.88
contig_1	Pyrodigal	gene	1105700	1106326	.	+	.	ID=GCA000560365_01066_gene;locus_tag=GCA000560365_01066
contig_1	Pyrodigal	CDS	1105700	1106326	.	+	0	ID=GCA000560365_01066;Name=Lipoprotein;locus_tag=GCA000560365_01066;product=Lipoprotein;Parent=GCA000560365_01066_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000668339.1,SO:0001217,UniParc:UPI00000D9D73,UniRef:UniRef100_Q2FZG5,UniRef:UniRef50_Q2FZG5,UniRef:UniRef90_Q2FZG5
contig_1	Pyrodigal	gene	1106497	1107609	.	+	.	ID=GCA000560365_01067_gene;locus_tag=GCA000560365_01067;gene=pdhA
contig_1	Pyrodigal	CDS	1106497	1107609	.	+	0	ID=GCA000560365_01067;Name=pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha;locus_tag=GCA000560365_01067;product=pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha;Dbxref=GO:0004739,GO:0006086,GO:0009083,GO:0045254;gene=pdhA;Parent=GCA000560365_01067_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1071,RefSeq:WP_000035320.1,SO:0001217,UniParc:UPI000000978E,UniRef:UniRef100_Q5HGZ1,UniRef:UniRef50_P21881,UniRef:UniRef90_Q5HGZ1;ec_number=1.2.4.1
contig_1	Pyrodigal	gene	1107613	1108590	.	+	.	ID=GCA000560365_01068_gene;locus_tag=GCA000560365_01068;gene=pdhB
contig_1	Pyrodigal	CDS	1107613	1108590	.	+	0	ID=GCA000560365_01068;Name=Pyruvate dehydrogenase E1 component subunit beta;locus_tag=GCA000560365_01068;product=Pyruvate dehydrogenase E1 component subunit beta;Dbxref=GO:0004739;gene=pdhB;Parent=GCA000560365_01068_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0022,RefSeq:WP_000068176.1,SO:0001217,UniParc:UPI0000054B50,UniRef:UniRef100_P0A0A1,UniRef:UniRef50_Q5HQ75,UniRef:UniRef90_Q5HQ75;ec_number=1.2.4.1
contig_1	Pyrodigal	gene	1108681	1109973	.	+	.	ID=GCA000560365_01069_gene;locus_tag=GCA000560365_01069;gene=pdhC
contig_1	Pyrodigal	CDS	1108681	1109973	.	+	0	ID=GCA000560365_01069;Name=Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex;locus_tag=GCA000560365_01069;product=Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex;Dbxref=GO:0004742,GO:0005737,GO:0031405;gene=pdhC;Parent=GCA000560365_01069_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0508,RefSeq:WP_000863440.1,SO:0001217,UniParc:UPI00000D9D74,UniRef:UniRef100_Q5HGY9,UniRef:UniRef50_P21883,UniRef:UniRef90_P65635;ec_number=2.3.1.12
contig_1	Pyrodigal	gene	1109977	1111383	.	+	.	ID=GCA000560365_01070_gene;locus_tag=GCA000560365_01070;gene=lpdA
contig_1	Pyrodigal	CDS	1109977	1111383	.	+	0	ID=GCA000560365_01070;Name=dihydrolipoyl dehydrogenase;locus_tag=GCA000560365_01070;product=dihydrolipoyl dehydrogenase;Dbxref=GO:0004148,GO:0005737,GO:0006090,GO:0006103,GO:0016020,GO:0050660;gene=lpdA;Parent=GCA000560365_01070_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1249,KEGG:K00382,RefSeq:WP_000260118.1,SO:0001217,UniParc:UPI0000696C0E,UniRef:UniRef100_A0A5A8VFS2,UniRef:UniRef50_P11959,UniRef:UniRef90_Q5HGY8;ec_number=1.8.1.4
contig_1	Pyrodigal	gene	1111551	1111826	.	+	.	ID=GCA000560365_01071_gene;locus_tag=GCA000560365_01071;gene=yktA
contig_1	Pyrodigal	CDS	1111551	1111826	.	+	0	ID=GCA000560365_01071;Name=UPF0223 protein SaurJH1_1179;locus_tag=GCA000560365_01071;product=UPF0223 protein SaurJH1_1179;gene=yktA;Parent=GCA000560365_01071_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4476,COG:S,RefSeq:WP_000455597.1,SO:0001217,UniParc:UPI000000978F,UniRef:UniRef100_Q2G2A2,UniRef:UniRef50_Q2G2A2,UniRef:UniRef90_Q2G2A2
contig_1	Pyrodigal	gene	1111970	1112509	.	+	.	ID=GCA000560365_01072_gene;locus_tag=GCA000560365_01072;gene=qdoI
contig_1	Pyrodigal	CDS	1111970	1112509	.	+	0	ID=GCA000560365_01072;Name=HTH cro/C1-type domain-containing protein;locus_tag=GCA000560365_01072;product=HTH cro/C1-type domain-containing protein;gene=qdoI;Parent=GCA000560365_01072_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1917,COG:R,RefSeq:WP_001020625.1,SO:0001217,UniParc:UPI0000054B4B,UniRef:UniRef100_Q2G2A6,UniRef:UniRef50_Q2G2A6,UniRef:UniRef90_Q2G2A6
contig_1	Pyrodigal	gene	1112522	1113616	.	+	.	ID=GCA000560365_01073_gene;locus_tag=GCA000560365_01073;gene=potA
contig_1	Pyrodigal	CDS	1112522	1113616	.	+	0	ID=GCA000560365_01073;Name=Spermidine/putrescine import ATP-binding protein PotA;locus_tag=GCA000560365_01073;product=Spermidine/putrescine import ATP-binding protein PotA;Dbxref=GO:0005524,GO:0015417,GO:0016887,GO:0043190;gene=potA;Parent=GCA000560365_01073_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3842,COG:E,RefSeq:WP_000433551.1,SO:0001217,UniParc:UPI00000D7714,UniRef:UniRef100_Q2G2A7,UniRef:UniRef50_Q24XJ2,UniRef:UniRef90_Q2G2A7;ec_number=7.6.2.11
contig_1	Pyrodigal	gene	1113609	1114406	.	+	.	ID=GCA000560365_01074_gene;locus_tag=GCA000560365_01074;gene=potB
contig_1	Pyrodigal	CDS	1113609	1114406	.	+	0	ID=GCA000560365_01074;Name=Spermidine/putrescine ABC transporter-like protein;locus_tag=GCA000560365_01074;product=Spermidine/putrescine ABC transporter-like protein;gene=potB;Parent=GCA000560365_01074_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1176,COG:E,RefSeq:WP_001246561.1,SO:0001217,UniParc:UPI0000054B49,UniRef:UniRef100_Q2G2B0,UniRef:UniRef50_S2XR89,UniRef:UniRef90_A0A7U7IE88
contig_1	Pyrodigal	gene	1114412	1115221	.	+	.	ID=GCA000560365_01075_gene;locus_tag=GCA000560365_01075;gene=potC
contig_1	Pyrodigal	CDS	1114412	1115221	.	+	0	ID=GCA000560365_01075;Name=ABC transporter permease;locus_tag=GCA000560365_01075;product=ABC transporter permease;gene=potC;Parent=GCA000560365_01075_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1177,COG:E,RefSeq:WP_000872390.1,SO:0001217,UniParc:UPI00000D7872,UniRef:UniRef100_Q2G2A9,UniRef:UniRef50_S2XKD8,UniRef:UniRef90_A0A2K4AL30
contig_1	Pyrodigal	gene	1115221	1116294	.	+	.	ID=GCA000560365_01076_gene;locus_tag=GCA000560365_01076;gene=potD
contig_1	Pyrodigal	CDS	1115221	1116294	.	+	0	ID=GCA000560365_01076;Name=ABC transporter%2C periplasmic spermidine putrescine-binding protein potD;locus_tag=GCA000560365_01076;product=ABC transporter%2C periplasmic spermidine putrescine-binding protein potD;gene=potD;Parent=GCA000560365_01076_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0687,COG:E,RefSeq:WP_000819690.1,SO:0001217,UniParc:UPI0000054B47,UniRef:UniRef100_Q2G2A8,UniRef:UniRef50_Q5HQ67,UniRef:UniRef90_A0A390B6L2
contig_1	Pyrodigal	gene	1116368	1117387	.	+	.	ID=GCA000560365_01077_gene;locus_tag=GCA000560365_01077;gene=auxB
contig_1	Pyrodigal	CDS	1116368	1117387	.	+	0	ID=GCA000560365_01077;Name=lipoteichoic acid stability factor AuxB;locus_tag=GCA000560365_01077;product=lipoteichoic acid stability factor AuxB;gene=auxB;Parent=GCA000560365_01077_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000145499.1,SO:0001217,UniParc:UPI00000522D5,UniRef:UniRef100_Q2G2G6,UniRef:UniRef50_A0A974KWU6,UniRef:UniRef90_Q2G2G6
contig_1	Pyrodigal	gene	1117670	1118089	.	+	.	ID=GCA000560365_01078_gene;locus_tag=GCA000560365_01078
contig_1	Pyrodigal	CDS	1117670	1118089	.	+	0	ID=GCA000560365_01078;Name=DUF4064 domain-containing protein;locus_tag=GCA000560365_01078;product=DUF4064 domain-containing protein;Parent=GCA000560365_01078_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001080462.1,SO:0001217,UniParc:UPI0000054B46,UniRef:UniRef100_Q2G2G5,UniRef:UniRef50_Q2G2G5,UniRef:UniRef90_Q2G2G5
contig_1	Pyrodigal	gene	1118171	1119523	.	-	.	ID=GCA000560365_01079_gene;locus_tag=GCA000560365_01079;gene=mntH
contig_1	Pyrodigal	CDS	1118171	1119523	.	-	0	ID=GCA000560365_01079;Name=Nramp family divalent metal transporter;locus_tag=GCA000560365_01079;product=Nramp family divalent metal transporter;Dbxref=GO:0005384,GO:0005886,GO:0015086,GO:0015293,GO:0016020,GO:0022857,GO:0034755,GO:0046872,GO:0055085;gene=mntH;Parent=GCA000560365_01079_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1914,COG:P,RefSeq:WP_001060842.1,SO:0001217,UniParc:UPI0000054B43,UniRef:UniRef100_Q2G2G3,UniRef:UniRef50_Q2G2G3,UniRef:UniRef90_Q2G2G3
contig_1	Pyrodigal	gene	1119707	1120321	.	-	.	ID=GCA000560365_01080_gene;locus_tag=GCA000560365_01080;gene=yktB
contig_1	Pyrodigal	CDS	1119707	1120321	.	-	0	ID=GCA000560365_01080;Name=UPF0637 protein MW0989;locus_tag=GCA000560365_01080;product=UPF0637 protein MW0989;gene=yktB;Parent=GCA000560365_01080_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4493,COG:S,RefSeq:WP_000170610.1,SO:0001217,UniParc:UPI0000054B42,UniRef:UniRef100_Q2G2G7,UniRef:UniRef50_Q2G2G7,UniRef:UniRef90_Q2G2G7
contig_1	Pyrodigal	gene	1120478	1121305	.	+	.	ID=GCA000560365_01081_gene;locus_tag=GCA000560365_01081;gene=suhB
contig_1	Pyrodigal	CDS	1120478	1121305	.	+	0	ID=GCA000560365_01081;Name=Inositol monophosphatase;locus_tag=GCA000560365_01081;product=Inositol monophosphatase;gene=suhB;Parent=GCA000560365_01081_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0483,COG:G,KEGG:K01092,RefSeq:WP_001240311.1,SO:0001217,UniParc:UPI00004B5BA1,UniRef:UniRef100_Q2G2G4,UniRef:UniRef50_A0A654A156,UniRef:UniRef90_A0A659IB49;ec_number=3.1.3.25
contig_1	Pyrodigal	gene	1121459	1121650	.	-	.	ID=GCA000560365_01082_gene;locus_tag=GCA000560365_01082;gene=ylaF
contig_1	Pyrodigal	CDS	1121459	1121650	.	-	0	ID=GCA000560365_01082;Name=YlaF family protein;locus_tag=GCA000560365_01082;product=YlaF family protein;gene=ylaF;Parent=GCA000560365_01082_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000810620.1,SO:0001217,UniParc:UPI0000054B40,UniRef:UniRef100_W8TML1,UniRef:UniRef50_Q49WN3,UniRef:UniRef90_A0A2K4ALB3
contig_1	Pyrodigal	gene	1121752	1123599	.	+	.	ID=GCA000560365_01083_gene;locus_tag=GCA000560365_01083;gene=typA
contig_1	Pyrodigal	CDS	1121752	1123599	.	+	0	ID=GCA000560365_01083;Name=translational GTPase TypA;locus_tag=GCA000560365_01083;product=translational GTPase TypA;Dbxref=GO:0003924,GO:0005525,GO:0006412,GO:0006950;gene=typA;Parent=GCA000560365_01083_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1217,COG:T,RefSeq:WP_000182654.1,SO:0001217,UniParc:UPI00000D768A,UniRef:UniRef100_Q2G1Y6,UniRef:UniRef50_A0A0R2DHU7,UniRef:UniRef90_A0A2A1K7F6
contig_1	Pyrodigal	gene	1123908	1124390	.	-	.	ID=GCA000560365_01084_gene;locus_tag=GCA000560365_01084
contig_1	Pyrodigal	CDS	1123908	1124390	.	-	0	ID=GCA000560365_01084;Name=Phage protein;locus_tag=GCA000560365_01084;product=Phage protein;Parent=GCA000560365_01084_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000614712.1,SO:0001217,UniParc:UPI00000D7668,UniRef:UniRef100_Q2G1Y7,UniRef:UniRef50_B9DPZ4,UniRef:UniRef90_A0A7U7JTX4
contig_1	Pyrodigal	gene	1124531	1124806	.	+	.	ID=GCA000560365_01085_gene;locus_tag=GCA000560365_01085;gene=ylaN
contig_1	Pyrodigal	CDS	1124531	1124806	.	+	0	ID=GCA000560365_01085;Name=UPF0358 protein SaurJH1_1194;locus_tag=GCA000560365_01085;product=UPF0358 protein SaurJH1_1194;gene=ylaN;Parent=GCA000560365_01085_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4838,COG:S,RefSeq:WP_001118417.1,SO:0001217,UniParc:UPI00000D7665,UniRef:UniRef100_Q2G2C3,UniRef:UniRef50_Q2G2C3,UniRef:UniRef90_Q2G2C3
contig_1	Pyrodigal	gene	1125120	1126346	.	+	.	ID=GCA000560365_01086_gene;locus_tag=GCA000560365_01086;gene=ftsW
contig_1	Pyrodigal	CDS	1125120	1126346	.	+	0	ID=GCA000560365_01086;Name=cell division protein FtsW;locus_tag=GCA000560365_01086;product=cell division protein FtsW;gene=ftsW;Parent=GCA000560365_01086_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000787940,COG:COG0772,COG:D,KEGG:K03588,RefSeq:WP_000787940.1,SO:0001217,UniParc:UPI00000D9D78,UniRef:UniRef100_Q2G2C2,UniRef:UniRef50_A0AAE8PBF8,UniRef:UniRef90_A0AAE8PBF8
contig_1	Pyrodigal	gene	1126900	1130352	.	+	.	ID=GCA000560365_01087_gene;locus_tag=GCA000560365_01087;gene=pycA
contig_1	Pyrodigal	CDS	1126900	1130352	.	+	0	ID=GCA000560365_01087;Name=pyruvate carboxylase;locus_tag=GCA000560365_01087;product=pyruvate carboxylase;Dbxref=GO:0004736,GO:0005524,GO:0005737,GO:0006090,GO:0006094,GO:0009374,GO:0042802,GO:0046872;gene=pycA;Parent=GCA000560365_01087_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1038,KEGG:K01958,RefSeq:WP_000809526.1,SO:0001217,UniParc:UPI0000696C0F,UniRef:UniRef100_A0A0E8G8A7,UniRef:UniRef50_A0A0H3JRU9,UniRef:UniRef90_A0A0H3JRU9;ec_number=6.4.1.1
contig_1	Pyrodigal	gene	1130492	1131562	.	-	.	ID=GCA000560365_01088_gene;locus_tag=GCA000560365_01088;gene=ctaA
contig_1	Pyrodigal	CDS	1130492	1131562	.	-	0	ID=GCA000560365_01088;Name=Heme A synthase;locus_tag=GCA000560365_01088;product=Heme A synthase;Dbxref=GO:0005886,GO:0006784,GO:0016653,GO:0046872;gene=ctaA;Parent=GCA000560365_01088_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1612,COG:H,KEGG:K02259,RefSeq:WP_001548380.1,SO:0001217,UniParc:UPI0000054B38,UniRef:UniRef100_A0A0D6HTV8,UniRef:UniRef50_Q2G2C0,UniRef:UniRef90_Q2G2C0;ec_number=1.17.99.9
contig_1	Pyrodigal	gene	1131843	1132754	.	+	.	ID=GCA000560365_01089_gene;locus_tag=GCA000560365_01089;gene=cyoE
contig_1	Pyrodigal	CDS	1131843	1132754	.	+	0	ID=GCA000560365_01089;Name=heme o synthase;locus_tag=GCA000560365_01089;product=heme o synthase;Dbxref=GO:0005886,GO:0006783,GO:0008495,GO:0016020,GO:0048034;gene=cyoE;Parent=GCA000560365_01089_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0109,COG:HI,RefSeq:WP_000031401.1,SO:0001217,UniParc:UPI0000054B37,UniRef:UniRef100_Q2G2B9,UniRef:UniRef50_Q8CPM1,UniRef:UniRef90_Q2G2B9;ec_number=2.5.1.141
contig_1	Pyrodigal	gene	1132779	1133240	.	+	.	ID=GCA000560365_01090_gene;locus_tag=GCA000560365_01090;gene=ctaM
contig_1	Pyrodigal	CDS	1132779	1133240	.	+	0	ID=GCA000560365_01090;Name=DUF420 domain-containing protein;locus_tag=GCA000560365_01090;product=DUF420 domain-containing protein;gene=ctaM;Parent=GCA000560365_01090_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2322,COG:O,KEGG:K08976,RefSeq:WP_000538766.1,SO:0001217,UniParc:UPI00000D787A,UniRef:UniRef100_Q2FZG3,UniRef:UniRef50_Q2FZG3,UniRef:UniRef90_Q2FZG3
contig_1	Pyrodigal	gene	1133567	1134604	.	+	.	ID=GCA000560365_01091_gene;locus_tag=GCA000560365_01091;gene=ykwD
contig_1	Pyrodigal	CDS	1133567	1134604	.	+	0	ID=GCA000560365_01091;Name=CAP domain-containing protein;locus_tag=GCA000560365_01091;product=CAP domain-containing protein;gene=ykwD;Parent=GCA000560365_01091_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2340,COG:DR,RefSeq:WP_000733409.1,SO:0001217,UniParc:UPI00000D77DB,UniRef:UniRef100_W8TQF1,UniRef:UniRef50_Q5HQ49,UniRef:UniRef90_A0A6A9GWF2
contig_1	Pyrodigal	gene	1134620	1135054	.	+	.	ID=GCA000560365_01092_gene;locus_tag=GCA000560365_01092;gene=ylbF
contig_1	Pyrodigal	CDS	1134620	1135054	.	+	0	ID=GCA000560365_01092;Name=YlbF family regulator;locus_tag=GCA000560365_01092;product=YlbF family regulator;gene=ylbF;Parent=GCA000560365_01092_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3679,COG:T,RefSeq:WP_000606480.1,SO:0001217,UniParc:UPI0000054B34,UniRef:UniRef100_Q2FZG0,UniRef:UniRef50_Q2FZG0,UniRef:UniRef90_Q2FZG0
contig_1	Pyrodigal	gene	1135117	1136043	.	-	.	ID=GCA000560365_01093_gene;locus_tag=GCA000560365_01093;gene=ugpQ
contig_1	Pyrodigal	CDS	1135117	1136043	.	-	0	ID=GCA000560365_01093;Name=Glycerophosphodiester phosphodiesterase;locus_tag=GCA000560365_01093;product=Glycerophosphodiester phosphodiesterase;gene=ugpQ;Parent=GCA000560365_01093_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0584,COG:I,KEGG:K01126,RefSeq:WP_000757569.1,SO:0001217,UniParc:UPI0000054B33,UniRef:UniRef100_Q2FZF9,UniRef:UniRef50_A0A3A3AIN7,UniRef:UniRef90_A0A3A3AIN7;ec_number=3.1.4.46
contig_1	Pyrodigal	gene	1136282	1136536	.	+	.	ID=GCA000560365_01094_gene;locus_tag=GCA000560365_01094;gene=ylbG
contig_1	Pyrodigal	CDS	1136282	1136536	.	+	0	ID=GCA000560365_01094;Name=UPF0298 protein SACOL1131;locus_tag=GCA000560365_01094;product=UPF0298 protein SACOL1131;Dbxref=GO:0005737;gene=ylbG;Parent=GCA000560365_01094_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4471,COG:S,RefSeq:WP_001049150.1,SO:0001217,UniParc:UPI0000054B32,UniRef:UniRef100_Q2FZF8,UniRef:UniRef50_Q2FZF8,UniRef:UniRef90_Q2FZF8
contig_1	Pyrodigal	gene	1136539	1136928	.	-	.	ID=GCA000560365_01095_gene;locus_tag=GCA000560365_01095
contig_1	Pyrodigal	CDS	1136539	1136928	.	-	0	ID=GCA000560365_01095;Name=Methylthioribose kinase;locus_tag=GCA000560365_01095;product=Methylthioribose kinase;Parent=GCA000560365_01095_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000814565.1,SO:0001217,UniParc:UPI0000054B31,UniRef:UniRef100_Q2FZF7,UniRef:UniRef50_B9DPZ2,UniRef:UniRef90_A0A2K4AL88
contig_1	Pyrodigal	gene	1136998	1137540	.	+	.	ID=GCA000560365_01096_gene;locus_tag=GCA000560365_01096;gene=rsmD
contig_1	Pyrodigal	CDS	1136998	1137540	.	+	0	ID=GCA000560365_01096;Name=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;locus_tag=GCA000560365_01096;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;Dbxref=GO:0031167,GO:0052913;gene=rsmD;Parent=GCA000560365_01096_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0742,COG:J,RefSeq:WP_001263796.1,SO:0001217,UniParc:UPI00000D7739,UniRef:UniRef100_Q2FZF6,UniRef:UniRef50_A0A9N8IIV2,UniRef:UniRef90_A0A9N8IIV2;ec_number=2.1.1.171
contig_1	Pyrodigal	gene	1137542	1138024	.	+	.	ID=GCA000560365_01097_gene;locus_tag=GCA000560365_01097;gene=coaD
contig_1	Pyrodigal	CDS	1137542	1138024	.	+	0	ID=GCA000560365_01097;Name=pantetheine-phosphate adenylyltransferase;locus_tag=GCA000560365_01097;product=pantetheine-phosphate adenylyltransferase;Dbxref=GO:0004595,GO:0005524,GO:0005737,GO:0015937;gene=coaD;Parent=GCA000560365_01097_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0669,COG:H,KEGG:K00954,RefSeq:WP_000401377.1,SO:0001217,UniParc:UPI0000054B2E,UniRef:UniRef100_Q2FZF5,UniRef:UniRef50_Q2FZF5,UniRef:UniRef90_Q2FZF5;ec_number=2.7.7.3
contig_1	Pyrodigal	gene	1138086	1139225	.	-	.	ID=GCA000560365_01098_gene;locus_tag=GCA000560365_01098;gene=tmcAL
contig_1	Pyrodigal	CDS	1138086	1139225	.	-	0	ID=GCA000560365_01098;Name=nucleotidyltransferase;locus_tag=GCA000560365_01098;product=nucleotidyltransferase;Dbxref=GO:0000049,GO:0005524,GO:0005737,GO:0006400,GO:0016879;gene=tmcAL;Parent=GCA000560365_01098_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1323,COG:J,KEGG:K27343,RefSeq:WP_000843611.1,SO:0001217,UniParc:UPI00000D7661,UniRef:UniRef100_Q2FZF4,UniRef:UniRef50_Q2FZF4,UniRef:UniRef90_Q2FZF4;ec_number=6.3.4.-
contig_1	Pyrodigal	gene	1139352	1139909	.	+	.	ID=GCA000560365_01099_gene;locus_tag=GCA000560365_01099;gene=yceD
contig_1	Pyrodigal	CDS	1139352	1139909	.	+	0	ID=GCA000560365_01099;Name=DUF177 domain-containing protein;locus_tag=GCA000560365_01099;product=DUF177 domain-containing protein;gene=yceD;Parent=GCA000560365_01099_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1399,COG:J,RefSeq:WP_000872158.1,SO:0001217,UniParc:UPI00000D7803,UniRef:UniRef100_Q2FZF3,UniRef:UniRef50_Q2FZF3,UniRef:UniRef90_Q2FZF3
contig_1	Pyrodigal	gene	1139989	1140162	.	+	.	ID=GCA000560365_01100_gene;locus_tag=GCA000560365_01100;gene=rpmF
contig_1	Pyrodigal	CDS	1139989	1140162	.	+	0	ID=GCA000560365_01100;Name=50S ribosomal protein L32;locus_tag=GCA000560365_01100;product=50S ribosomal protein L32;Dbxref=GO:0003735,GO:0006412,GO:0015934;gene=rpmF;Parent=GCA000560365_01100_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0333,COG:J,RefSeq:WP_000290472.1,SO:0001217,UniParc:UPI0000133F6C,UniRef:UniRef100_Q2FHV3,UniRef:UniRef50_B7JC05,UniRef:UniRef90_Q5HQ39
contig_1	Pyrodigal	gene	1140316	1142253	.	-	.	ID=GCA000560365_01101_gene;locus_tag=GCA000560365_01101;gene=isdB
contig_1	Pyrodigal	CDS	1140316	1142253	.	-	0	ID=GCA000560365_01101;Name=iron-regulated surface determinant protein B%2C haemoglobin receptor;locus_tag=GCA000560365_01101;product=iron-regulated surface determinant protein B%2C haemoglobin receptor;Dbxref=GO:0005576,GO:0015232,GO:0015886,GO:0020037,GO:0046872;gene=isdB;Parent=GCA000560365_01101_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5386,COG:P,RefSeq:WP_001041586.1,SO:0001217,UniParc:UPI0000052308,UniRef:UniRef100_Q2FZF0,UniRef:UniRef50_Q2FZF0,UniRef:UniRef90_Q2FZF0,VFDB:VFC0272,VFDB:VFG001317
contig_1	Pyrodigal	gene	1142456	1143508	.	-	.	ID=GCA000560365_01102_gene;locus_tag=GCA000560365_01102;gene=isdA
contig_1	Pyrodigal	CDS	1142456	1143508	.	-	0	ID=GCA000560365_01102;Name=iron-regulated surface determinant protein A;locus_tag=GCA000560365_01102;product=iron-regulated surface determinant protein A;Dbxref=GO:0005576,GO:0046872;gene=isdA;Parent=GCA000560365_01102_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5386,COG:P,RefSeq:WP_000160859.1,SO:0001217,UniParc:UPI0000054409,UniRef:UniRef100_Q2FZE9,UniRef:UniRef50_Q2FZE9,UniRef:UniRef90_Q2FZE9,VFDB:VFC0272,VFDB:VFG001318
contig_1	Pyrodigal	gene	1143717	1144400	.	+	.	ID=GCA000560365_01103_gene;locus_tag=GCA000560365_01103;gene=isdC
contig_1	Pyrodigal	CDS	1143717	1144400	.	+	0	ID=GCA000560365_01103;Name=iron-regulated surface determinant protein C;locus_tag=GCA000560365_01103;product=iron-regulated surface determinant protein C;Dbxref=GO:0005576,GO:0009274,GO:0015886,GO:0030492,GO:0046872;gene=isdC;Parent=GCA000560365_01103_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5386,COG:P,RefSeq:WP_000789821.1,SO:0001217,UniParc:UPI00000D76CB,UniRef:UniRef100_Q8KQR1,UniRef:UniRef50_Q8KQR1,UniRef:UniRef90_Q8KQR1,VFDB:VFC0272,VFDB:VFG001319
contig_1	Pyrodigal	gene	1144400	1145476	.	+	.	ID=GCA000560365_01104_gene;locus_tag=GCA000560365_01104;gene=isdD
contig_1	Pyrodigal	CDS	1144400	1145476	.	+	0	ID=GCA000560365_01104;Name=iron-regulated surface determinant protein D;locus_tag=GCA000560365_01104;product=iron-regulated surface determinant protein D;gene=isdD;Parent=GCA000560365_01104_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K25116,RefSeq:WP_001246698.1,SO:0001217,UniParc:UPI0000054407,UniRef:UniRef100_Q2FZE7,UniRef:UniRef50_Q2FZE7,UniRef:UniRef90_Q2FZE7,VFDB:VFC0272,VFDB:VFG044266
contig_1	Pyrodigal	gene	1145473	1146351	.	+	.	ID=GCA000560365_01105_gene;locus_tag=GCA000560365_01105;gene=isdE
contig_1	Pyrodigal	CDS	1145473	1146351	.	+	0	ID=GCA000560365_01105;Name=iron-regulated surface determinant protein E;locus_tag=GCA000560365_01105;product=iron-regulated surface determinant protein E;Dbxref=GO:0005886,GO:0015886,GO:0016020,GO:0020037,GO:0046872,GO:0071281;gene=isdE;Parent=GCA000560365_01105_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0614,COG:P,RefSeq:WP_001220199.1,SO:0001217,UniParc:UPI00000D7746,UniRef:UniRef100_Q2FZE6,UniRef:UniRef50_Q2FZE6,UniRef:UniRef90_Q2FZE6,VFDB:VFC0272,VFDB:VFG001321
contig_1	Pyrodigal	gene	1146361	1147329	.	+	.	ID=GCA000560365_01106_gene;locus_tag=GCA000560365_01106;gene=isdF
contig_1	Pyrodigal	CDS	1146361	1147329	.	+	0	ID=GCA000560365_01106;Name=iron-regulated surface determinant protein F%2C ATP-binding-cassette-type transmembrane transporter;locus_tag=GCA000560365_01106;product=iron-regulated surface determinant protein F%2C ATP-binding-cassette-type transmembrane transporter;Dbxref=GO:0005886,GO:0022857,GO:0033214;gene=isdF;Parent=GCA000560365_01106_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0609,COG:P,SO:0001217,UniParc:UPI00000BE5B6,UniRef:UniRef100_Q2FHU7,UniRef:UniRef50_Q2FZE5,UniRef:UniRef90_Q2FZE5,VFDB:VFC0272,VFDB:VFG044268
contig_1	Pyrodigal	gene	1147391	1148125	.	+	.	ID=GCA000560365_01107_gene;locus_tag=GCA000560365_01107;gene=srtB
contig_1	Pyrodigal	CDS	1147391	1148125	.	+	0	ID=GCA000560365_01107;Name=NPQTN specific sortase B;locus_tag=GCA000560365_01107;product=NPQTN specific sortase B;Dbxref=GO:0004197,GO:0005886,GO:0016485,GO:0016787,GO:0045184;gene=srtB;Parent=GCA000560365_01107_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4509,COG:S,KEGG:K08600,RefSeq:WP_001242429.1,SO:0001217,UniParc:UPI0000054404,UniRef:UniRef100_Q2FZE3,UniRef:UniRef50_Q2FZE3,UniRef:UniRef90_Q2FZE3,VFDB:VFC0272,VFDB:VFG044269;ec_number=3.4.22.71
contig_1	Pyrodigal	gene	1148144	1148467	.	+	.	ID=GCA000560365_01108_gene;locus_tag=GCA000560365_01108;gene=isdG
contig_1	Pyrodigal	CDS	1148144	1148467	.	+	0	ID=GCA000560365_01108;Name=staphylobilin-forming heme oxygenase IsdG;locus_tag=GCA000560365_01108;product=staphylobilin-forming heme oxygenase IsdG;Dbxref=GO:0004392,GO:0005506,GO:0005737,GO:0020037,GO:0033212,GO:0042167;gene=isdG;Parent=GCA000560365_01108_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000670950,COG:COG2329,COG:H,KEGG:K07145,RefSeq:WP_000670950.1,SO:0001217,UniParc:UPI0000054403,UniRef:UniRef100_Q2FZE2,UniRef:UniRef50_Q2FZE2,UniRef:UniRef90_Q2FZE2;ec_number=1.14.99.48
contig_1	Pyrodigal	gene	1148851	1149591	.	+	.	ID=GCA000560365_01109_gene;locus_tag=GCA000560365_01109;gene=spoU
contig_1	Pyrodigal	CDS	1148851	1149591	.	+	0	ID=GCA000560365_01109;Name=RNA methyltransferase;locus_tag=GCA000560365_01109;product=RNA methyltransferase;gene=spoU;Parent=GCA000560365_01109_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0566,COG:J,RefSeq:WP_000435374.1,SO:0001217,UniParc:UPI0000054402,UniRef:UniRef100_Q2FZE0,UniRef:UniRef50_A0A098H324,UniRef:UniRef90_A0A098H324
contig_1	Pyrodigal	gene	1149972	1151030	.	+	.	ID=GCA000560365_01110_gene;locus_tag=GCA000560365_01110;gene=pheS
contig_1	Pyrodigal	CDS	1149972	1151030	.	+	0	ID=GCA000560365_01110;Name=phenylalanine--tRNA ligase subunit alpha;locus_tag=GCA000560365_01110;product=phenylalanine--tRNA ligase subunit alpha;Dbxref=GO:0000049,GO:0000166,GO:0000287,GO:0004826,GO:0005524,GO:0005737,GO:0006432,GO:0016740;gene=pheS;Parent=GCA000560365_01110_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01889,RefSeq:WP_000003559.1,SO:0001217,UniParc:UPI0000054401,UniRef:UniRef100_Q2FZD9,UniRef:UniRef50_Q4L5E3,UniRef:UniRef90_Q2FZD9;ec_number=6.1.1.20
contig_1	Pyrodigal	gene	1151030	1153432	.	+	.	ID=GCA000560365_01111_gene;locus_tag=GCA000560365_01111;gene=pheT
contig_1	Pyrodigal	CDS	1151030	1153432	.	+	0	ID=GCA000560365_01111;Name=phenylalanine--tRNA ligase subunit beta;locus_tag=GCA000560365_01111;product=phenylalanine--tRNA ligase subunit beta;Dbxref=GO:0000049,GO:0000287,GO:0004826,GO:0005524,GO:0006432,GO:0009328,GO:0016740;gene=pheT;Parent=GCA000560365_01111_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0073,COG:J,KEGG:K01890,RefSeq:WP_000908981.1,SO:0001217,UniParc:UPI0000696C11,UniRef:UniRef100_Q2FHU2,UniRef:UniRef50_Q4L5E4,UniRef:UniRef90_Q2FHU2;ec_number=6.1.1.20
contig_1	Pyrodigal	gene	1153603	1154541	.	-	.	ID=GCA000560365_01112_gene;locus_tag=GCA000560365_01112;gene=rnhC
contig_1	Pyrodigal	CDS	1153603	1154541	.	-	0	ID=GCA000560365_01112;Name=ribonuclease HIII;locus_tag=GCA000560365_01112;product=ribonuclease HIII;Dbxref=GO:0000287,GO:0003723,GO:0004523,GO:0005737,GO:0006298,GO:0006401,GO:0032299,GO:0043137;gene=rnhC;Parent=GCA000560365_01112_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1039,COG:L,KEGG:K03471,RefSeq:WP_001284258.1,SO:0001217,UniParc:UPI00004B5BA8,UniRef:UniRef100_Q2FZD7,UniRef:UniRef50_Q2FZD7,UniRef:UniRef90_Q2FZD7;ec_number=3.1.26.4
contig_1	Pyrodigal	gene	1154911	1155177	.	+	.	ID=GCA000560365_01113_gene;locus_tag=GCA000560365_01113;gene=zapA
contig_1	Pyrodigal	CDS	1154911	1155177	.	+	0	ID=GCA000560365_01113;Name=cell division protein ZapA;locus_tag=GCA000560365_01113;product=cell division protein ZapA;Dbxref=GO:0051301;gene=zapA;Parent=GCA000560365_01113_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00004B5BA9,UniRef:UniRef100_A0A0D3Q6G5,UniRef:UniRef50_A0A085UFE6,UniRef:UniRef90_A0A0D3Q6G5
contig_1	Pyrodigal	gene	1155178	1155699	.	+	.	ID=GCA000560365_01114_gene;locus_tag=GCA000560365_01114;gene=cvpA
contig_1	Pyrodigal	CDS	1155178	1155699	.	+	0	ID=GCA000560365_01114;Name=CvpA family protein;locus_tag=GCA000560365_01114;product=CvpA family protein;gene=cvpA;Parent=GCA000560365_01114_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1286,COG:FM,RefSeq:WP_000234068.1,SO:0001217,UniParc:UPI00000543FD,UniRef:UniRef100_Q2FZD5,UniRef:UniRef50_Q2FZD5,UniRef:UniRef90_Q2FZD5
contig_1	Pyrodigal	gene	1155772	1157484	.	+	.	ID=GCA000560365_01115_gene;locus_tag=GCA000560365_01115;gene=polX
contig_1	Pyrodigal	CDS	1155772	1157484	.	+	0	ID=GCA000560365_01115;Name=DNA polymerase/3'-5' exonuclease PolX;locus_tag=GCA000560365_01115;product=DNA polymerase/3'-5' exonuclease PolX;Dbxref=GO:0003677,GO:0003887,GO:0006281;gene=polX;Parent=GCA000560365_01115_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1796,COG:L,RefSeq:WP_000161942.1,SO:0001217,UniParc:UPI00000543FC,UniRef:UniRef100_Q2FZD4,UniRef:UniRef50_A0A0U1MIQ0,UniRef:UniRef90_A0A0U1MIQ0
contig_1	Pyrodigal	gene	1157494	1159842	.	+	.	ID=GCA000560365_01116_gene;locus_tag=GCA000560365_01116;gene=mutS2
contig_1	Pyrodigal	CDS	1157494	1159842	.	+	0	ID=GCA000560365_01116;Name=endonuclease MutS2;locus_tag=GCA000560365_01116;product=endonuclease MutS2;Dbxref=GO:0004519,GO:0005524,GO:0006259,GO:0006298,GO:0016887,GO:0019843,GO:0030983,GO:0045910,GO:0140664;gene=mutS2;Parent=GCA000560365_01116_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1193,COG:J,KEGG:K07456,RefSeq:WP_001249285.1,SO:0001217,UniParc:UPI00000543FB,UniRef:UniRef100_Q2FZD3,UniRef:UniRef50_Q2FZD3,UniRef:UniRef90_Q2FZD3;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	1160015	1160329	.	+	.	ID=GCA000560365_01117_gene;locus_tag=GCA000560365_01117;gene=trxA
contig_1	Pyrodigal	CDS	1160015	1160329	.	+	0	ID=GCA000560365_01117;Name=thioredoxin;locus_tag=GCA000560365_01117;product=thioredoxin;Dbxref=GO:0005829,GO:0015035,GO:0045454;gene=trxA;Parent=GCA000560365_01117_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3118,COG:O,RefSeq:WP_001018928.1,SO:0001217,UniParc:UPI00000D78B6,UniRef:UniRef100_Q2FZD2,UniRef:UniRef50_P14949,UniRef:UniRef90_Q2FZD2
contig_1	Pyrodigal	gene	1160653	1162434	.	+	.	ID=GCA000560365_01118_gene;locus_tag=GCA000560365_01118;gene=uvrC
contig_1	Pyrodigal	CDS	1160653	1162434	.	+	0	ID=GCA000560365_01118;Name=excinuclease ABC subunit UvrC;locus_tag=GCA000560365_01118;product=excinuclease ABC subunit UvrC;Dbxref=GO:0003677,GO:0005737,GO:0006289,GO:0009380,GO:0009381,GO:0009432;gene=uvrC;Parent=GCA000560365_01118_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0322,COG:L,KEGG:K03703,RefSeq:WP_000390529.1,SO:0001217,UniParc:UPI00004B5BAA,UniRef:UniRef100_Q2FZD0,UniRef:UniRef50_Q8DQQ9,UniRef:UniRef90_Q2FZD0
contig_1	Pyrodigal	gene	1162758	1163372	.	+	.	ID=GCA000560365_01119_gene;locus_tag=GCA000560365_01119;gene=sdhC
contig_1	Pyrodigal	CDS	1162758	1163372	.	+	0	ID=GCA000560365_01119;Name=succinate dehydrogenase%2C cytochrome b556 subunit;locus_tag=GCA000560365_01119;product=succinate dehydrogenase%2C cytochrome b556 subunit;Dbxref=GO:0000104,GO:0006099,GO:0009055,GO:0045273;gene=sdhC;Parent=GCA000560365_01119_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG2009,RefSeq:WP_000079317.1,SO:0001217,UniParc:UPI00000D786C,UniRef:UniRef100_Q2FZC9,UniRef:UniRef50_P08064,UniRef:UniRef90_A0A7U7JU09
contig_1	Pyrodigal	gene	1163424	1165190	.	+	.	ID=GCA000560365_01120_gene;locus_tag=GCA000560365_01120;gene=sdhA
contig_1	Pyrodigal	CDS	1163424	1165190	.	+	0	ID=GCA000560365_01120;Name=succinate dehydrogenase flavoprotein subunit;locus_tag=GCA000560365_01120;product=succinate dehydrogenase flavoprotein subunit;gene=sdhA;Parent=GCA000560365_01120_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1053,RefSeq:WP_000818278.1,SO:0001217,UniParc:UPI00000543F4,UniRef:UniRef100_Q2FZC8,UniRef:UniRef50_P08065,UniRef:UniRef90_A0AAE8PAN5
contig_1	Pyrodigal	gene	1165190	1166005	.	+	.	ID=GCA000560365_01121_gene;locus_tag=GCA000560365_01121;gene=sdhB
contig_1	Pyrodigal	CDS	1165190	1166005	.	+	0	ID=GCA000560365_01121;Name=succinate dehydrogenase iron-sulfur subunit;locus_tag=GCA000560365_01121;product=succinate dehydrogenase iron-sulfur subunit;Dbxref=GO:0006099,GO:0009055,GO:0016491,GO:0051536;gene=sdhB;Parent=GCA000560365_01121_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0479,RefSeq:WP_000139712.1,SO:0001217,UniParc:UPI00000543F3,UniRef:UniRef100_Q2FZC7,UniRef:UniRef50_P08066,UniRef:UniRef90_A0AAE8PBW8
contig_1	Pyrodigal	gene	1166241	1167041	.	+	.	ID=GCA000560365_01122_gene;locus_tag=GCA000560365_01122;gene=racE
contig_1	Pyrodigal	CDS	1166241	1167041	.	+	0	ID=GCA000560365_01122;Name=glutamate racemase;locus_tag=GCA000560365_01122;product=glutamate racemase;Dbxref=GO:0008152,GO:0008360,GO:0008881,GO:0009252,GO:0071555;gene=racE;Parent=GCA000560365_01122_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0796,COG:M,RefSeq:WP_001039654.1,SO:0001217,UniParc:UPI0001B3A97B,UniRef:UniRef100_UPI0001B3A97B,UniRef:UniRef50_Q6GHT5,UniRef:UniRef90_Q6GHT5;ec_number=5.1.1.3
contig_1	Pyrodigal	gene	1167053	1167640	.	+	.	ID=GCA000560365_01123_gene;locus_tag=GCA000560365_01123;gene=rdgB
contig_1	Pyrodigal	CDS	1167053	1167640	.	+	0	ID=GCA000560365_01123;Name=XTP/dITP diphosphatase;locus_tag=GCA000560365_01123;product=XTP/dITP diphosphatase;Dbxref=GO:0000166,GO:0005829,GO:0009117,GO:0009143,GO:0009146,GO:0017111,GO:0035870,GO:0036220,GO:0036222,GO:0046872,GO:0047429;gene=rdgB;Parent=GCA000560365_01123_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0127,COG:F,KEGG:K01519,RefSeq:WP_000659317.1,SO:0001217,UniParc:UPI00000543F1,UniRef:UniRef100_Q5HGT2,UniRef:UniRef50_Q8CSY5,UniRef:UniRef90_P64309;ec_number=3.6.1.66
contig_1	Pyrodigal	gene	1167633	1168136	.	+	.	ID=GCA000560365_01124_gene;locus_tag=GCA000560365_01124;gene=yfcE
contig_1	Pyrodigal	CDS	1167633	1168136	.	+	0	ID=GCA000560365_01124;Name=Phosphoesterase;locus_tag=GCA000560365_01124;product=Phosphoesterase;gene=yfcE;Parent=GCA000560365_01124_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0622,COG:R,KEGG:K07095,RefSeq:WP_000049484.1,SO:0001217,UniParc:UPI00000D789F,UniRef:UniRef100_Q2FZC4,UniRef:UniRef50_Q2FZC4,UniRef:UniRef90_Q2FZC4
contig_1	Pyrodigal	gene	1168625	1168954	.	+	.	ID=GCA000560365_01125_gene;locus_tag=GCA000560365_01125;gene=ecb
contig_1	Pyrodigal	CDS	1168625	1168954	.	+	0	ID=GCA000560365_01125;Name=complement convertase inhibitor Ecb;locus_tag=GCA000560365_01125;product=complement convertase inhibitor Ecb;gene=ecb;Parent=GCA000560365_01125_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000739209,RefSeq:WP_000739209.1,SO:0001217,UniParc:UPI00004B5BAC,UniRef:UniRef100_Q2FZC2,UniRef:UniRef50_A0A3M8VBL4,UniRef:UniRef90_Q2FZC2
contig_1	Pyrodigal	gene	1169323	1169724	.	-	.	ID=GCA000560365_01126_gene;locus_tag=GCA000560365_01126;gene=flr
contig_1	Pyrodigal	CDS	1169323	1169724	.	-	0	ID=GCA000560365_01126;Name=FPRL1 inhibitory protein FLIPr;locus_tag=GCA000560365_01126;product=FPRL1 inhibitory protein FLIPr;Dbxref=GO:0005576;gene=flr;Parent=GCA000560365_01126_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K14203,RefSeq:WP_000739563.1,SO:0001217,UniParc:UPI00000543EB,UniRef:UniRef100_Q2FZC0,UniRef:UniRef50_A6QG57,UniRef:UniRef90_Q2FZC0
contig_1	Pyrodigal	gene	1170396	1170902	.	+	.	ID=GCA000560365_01127_gene;locus_tag=GCA000560365_01127
contig_1	Pyrodigal	CDS	1170396	1170902	.	+	0	ID=GCA000560365_01127;Name=hypothetical protein;locus_tag=GCA000560365_01127;product=hypothetical protein;Parent=GCA000560365_01127_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000584398.1,SO:0001217,UniParc:UPI00000543EA,UniRef:UniRef100_Q2FZB9,UniRef:UniRef50_Q2FZB9,UniRef:UniRef90_Q2FZB9
contig_1	Pyrodigal	gene	1171161	1171658	.	+	.	ID=GCA000560365_01128_gene;locus_tag=GCA000560365_01128;gene=efb
contig_1	Pyrodigal	CDS	1171161	1171658	.	+	0	ID=GCA000560365_01128;Name=complement convertase inhibitor Efb;locus_tag=GCA000560365_01128;product=complement convertase inhibitor Efb;Dbxref=GO:0001848,GO:0005615;gene=efb;Parent=GCA000560365_01128_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000791587,RefSeq:WP_000791587.1,SO:0001217,UniParc:UPI00000543E9,UniRef:UniRef100_Q5HGS6,UniRef:UniRef50_P68799,UniRef:UniRef90_P68799
contig_1	Pyrodigal	gene	1171812	1172162	.	+	.	ID=GCA000560365_01129_gene;locus_tag=GCA000560365_01129;gene=scb
contig_1	Pyrodigal	CDS	1171812	1172162	.	+	0	ID=GCA000560365_01129;Name=complement inhibitor SCIN-B;locus_tag=GCA000560365_01129;product=complement inhibitor SCIN-B;gene=scb;Parent=GCA000560365_01129_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000669537,KEGG:K14199,RefSeq:WP_000669537.1,SO:0001217,UniParc:UPI00000543E8,UniRef:UniRef100_Q2FZB7,UniRef:UniRef50_A0A0U1MK84,UniRef:UniRef90_A0A6A8G3H0
contig_1	Infernal	gene	1172390	1172698	.	-	.	ID=GCA000560365_01130_gene;locus_tag=GCA000560365_01130;gene=S35
contig_1	Infernal	ncRNA	1172390	1172698	1.3e-12	-	.	ID=GCA000560365_01130;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000560365_01130;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000560365_01130_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	1172815	1173000	.	-	.	ID=GCA000560365_01131_gene;locus_tag=GCA000560365_01131
contig_1	Pyrodigal	CDS	1172815	1173000	.	-	0	ID=GCA000560365_01131;Name=DUF4044 domain-containing protein;locus_tag=GCA000560365_01131;product=DUF4044 domain-containing protein;Parent=GCA000560365_01131_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001032814.1,SO:0001217,UniParc:UPI00000543E7,UniRef:UniRef100_Q2G1X3,UniRef:UniRef50_Q2G1X3,UniRef:UniRef90_Q2G1X3
contig_1	Pyrodigal	gene	1173622	1173855	.	-	.	ID=GCA000560365_01132_gene;locus_tag=GCA000560365_01132
contig_1	Pyrodigal	CDS	1173622	1173855	.	-	0	ID=GCA000560365_01132;Name=Phage protein;locus_tag=GCA000560365_01132;product=Phage protein;Parent=GCA000560365_01132_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000231632.1,SO:0001217,UniParc:UPI00000543E6,UniRef:UniRef100_Q2G1X1,UniRef:UniRef50_Q2G1X1,UniRef:UniRef90_Q2G1X1
contig_1	Pyrodigal	gene	1174332	1175291	.	-	.	ID=GCA000560365_01133_gene;locus_tag=GCA000560365_01133;gene=hyl
contig_1	Pyrodigal	CDS	1174332	1175291	.	-	0	ID=GCA000560365_01133;Name=alpha-hemolysin;locus_tag=GCA000560365_01133;product=alpha-hemolysin;Dbxref=GO:0005576,GO:0042802,GO:0051715,GO:0090729;gene=hyl;Parent=GCA000560365_01133_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000857483,KEGG:K11032,RefSeq:WP_000857483.1,SO:0001217,UniParc:UPI00004B5BAF,UniRef:UniRef100_Q2G1X0,UniRef:UniRef50_P09616,UniRef:UniRef90_P09616
contig_1	Pyrodigal	gene	1175964	1176110	.	+	.	ID=GCA000560365_01134_gene;locus_tag=GCA000560365_01134
contig_1	Pyrodigal	CDS	1175964	1176110	.	+	0	ID=GCA000560365_01134;Name=Lmo0937 family membrane protein;locus_tag=GCA000560365_01134;product=Lmo0937 family membrane protein;Parent=GCA000560365_01134_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000765708.1,SO:0001217,UniParc:UPI00000543E3,UniRef:UniRef100_Q2G1X4,UniRef:UniRef50_A0AAE2ZVL9,UniRef:UniRef90_Q2G1X4
contig_1	Pyrodigal	gene	1176094	1176291	.	+	.	ID=GCA000560365_01135_gene;locus_tag=GCA000560365_01135
contig_1	Pyrodigal	CDS	1176094	1176291	.	+	0	ID=GCA000560365_01135;Name=XRE family transcriptional regulator;locus_tag=GCA000560365_01135;product=XRE family transcriptional regulator;Parent=GCA000560365_01135_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000137801.1,SO:0001217,UniParc:UPI00000543E2,UniRef:UniRef100_Q2FZB4,UniRef:UniRef50_Q2FZB4,UniRef:UniRef90_Q2FZB4
contig_1	Infernal	gene	1176359	1176631	.	-	.	ID=GCA000560365_01136_gene;locus_tag=GCA000560365_01136;gene=S35
contig_1	Infernal	ncRNA	1176359	1176631	2.4e-22	-	.	ID=GCA000560365_01136;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000560365_01136;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000560365_01136_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	1176736	1177452	.	-	.	ID=GCA000560365_01137_gene;locus_tag=GCA000560365_01137
contig_1	Pyrodigal	CDS	1176736	1177452	.	-	0	ID=GCA000560365_01137;Name=superantigen-like protein SSL12;locus_tag=GCA000560365_01137;product=superantigen-like protein SSL12;Parent=GCA000560365_01137_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000041896.1,SO:0001217,UniParc:UPI00004B5BB2,UniRef:UniRef100_Q2FZB3,UniRef:UniRef50_A0A0H3K7M3,UniRef:UniRef90_Q2FZB3
contig_1	Pyrodigal	gene	1177560	1178285	.	-	.	ID=GCA000560365_01138_gene;locus_tag=GCA000560365_01138;gene=ssl13
contig_1	Pyrodigal	CDS	1177560	1178285	.	-	0	ID=GCA000560365_01138;Name=superantigen-like protein SSL13;locus_tag=GCA000560365_01138;product=superantigen-like protein SSL13;Dbxref=GO:0005576;gene=ssl13;Parent=GCA000560365_01138_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001063559.1,SO:0001217,UniParc:UPI00000543E0,UniRef:UniRef100_A0A0H3K7M3,UniRef:UniRef50_A0A0H3K7M3,UniRef:UniRef90_A0A0H3K7M3
contig_1	Pyrodigal	gene	1178380	1179105	.	-	.	ID=GCA000560365_01139_gene;locus_tag=GCA000560365_01139
contig_1	Pyrodigal	CDS	1178380	1179105	.	-	0	ID=GCA000560365_01139;Name=superantigen-like protein SSL14;locus_tag=GCA000560365_01139;product=superantigen-like protein SSL14;Parent=GCA000560365_01139_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000739523.1,SO:0001217,UniParc:UPI00000543DF,UniRef:UniRef100_Q2FZB1,UniRef:UniRef50_A0A0H3K7M3,UniRef:UniRef90_Q2FZB1
contig_1	Pyrodigal	gene	1179543	1180544	.	+	.	ID=GCA000560365_01140_gene;locus_tag=GCA000560365_01140;gene=argF
contig_1	Pyrodigal	CDS	1179543	1180544	.	+	0	ID=GCA000560365_01140;Name=ornithine carbamoyltransferase;locus_tag=GCA000560365_01140;product=ornithine carbamoyltransferase;Dbxref=GO:0004585,GO:0005737,GO:0006526,GO:0016597,GO:0019240,GO:0042450;gene=argF;Parent=GCA000560365_01140_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0078,COG:E,KEGG:K00611,RefSeq:WP_000793605.1,SO:0001217,UniParc:UPI00004B5BB3,UniRef:UniRef100_Q5HGR3,UniRef:UniRef50_P08308,UniRef:UniRef90_P0C0N0;ec_number=2.1.3.3
contig_1	Pyrodigal	gene	1180564	1181499	.	+	.	ID=GCA000560365_01141_gene;locus_tag=GCA000560365_01141;gene=arcC
contig_1	Pyrodigal	CDS	1180564	1181499	.	+	0	ID=GCA000560365_01141;Name=carbamate kinase;locus_tag=GCA000560365_01141;product=carbamate kinase;Dbxref=GO:0005524,GO:0005829,GO:0006520,GO:0008804,GO:0019546;gene=arcC;Parent=GCA000560365_01141_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0549,COG:E,SO:0001217,UniParc:UPI00006E412B,UniRef:UniRef100_A0A0D6HRT5,UniRef:UniRef50_Q2FZA9,UniRef:UniRef90_Q2FZA9;ec_number=2.7.2.2
contig_1	Pyrodigal	gene	1181671	1183227	.	+	.	ID=GCA000560365_01142_gene;locus_tag=GCA000560365_01142;gene=yfcC
contig_1	Pyrodigal	CDS	1181671	1183227	.	+	0	ID=GCA000560365_01142;Name=ArcD-like protein;locus_tag=GCA000560365_01142;product=ArcD-like protein;gene=yfcC;Parent=GCA000560365_01142_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1288,COG:R,RefSeq:WP_000432077.1,SO:0001217,UniParc:UPI00000522D6,UniRef:UniRef100_H9BJB2,UniRef:UniRef50_P44023,UniRef:UniRef90_H9BJB2
contig_1	Pyrodigal	gene	1183535	1183762	.	+	.	ID=GCA000560365_01143_gene;locus_tag=GCA000560365_01143;gene=elxI1
contig_1	Pyrodigal	CDS	1183535	1183762	.	+	0	ID=GCA000560365_01143;Name=epilancin biosynthesis-related protein ElxI1;locus_tag=GCA000560365_01143;product=epilancin biosynthesis-related protein ElxI1;gene=elxI1;Parent=GCA000560365_01143_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000149423.1,SO:0001217,UniParc:UPI00000543DB,UniRef:UniRef100_Q2FZA7,UniRef:UniRef50_I6ZHL4,UniRef:UniRef90_Q2FZA7
contig_1	Pyrodigal	gene	1184067	1185014	.	-	.	ID=GCA000560365_01144_gene;locus_tag=GCA000560365_01144;gene=tehA
contig_1	Pyrodigal	CDS	1184067	1185014	.	-	0	ID=GCA000560365_01144;Name=Permease;locus_tag=GCA000560365_01144;product=Permease;gene=tehA;Parent=GCA000560365_01144_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1275,COG:V,KEGG:K11041,RefSeq:WP_001239288.1,SO:0001217,UniParc:UPI0000696C13,UniRef:UniRef100_A0A0E8G6M5,UniRef:UniRef50_Q2FZA6,UniRef:UniRef90_Q2FZA6
contig_1	Pyrodigal	gene	1185263	1185451	.	+	.	ID=GCA000560365_01145_gene;locus_tag=GCA000560365_01145
contig_1	Pyrodigal	CDS	1185263	1185451	.	+	0	ID=GCA000560365_01145;Name=DNA-binding protein;locus_tag=GCA000560365_01145;product=DNA-binding protein;Parent=GCA000560365_01145_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001245802.1,SO:0001217,UniParc:UPI00000D9D8E,UniRef:UniRef100_Q2FZA5,UniRef:UniRef50_Q2FZA5,UniRef:UniRef90_Q2FZA5
contig_1	tRNAscan-SE	gene	1185926	1185999	.	-	.	ID=GCA000560365_01146_gene;locus_tag=GCA000560365_01146;gene=trnR
contig_1	tRNAscan-SE	tRNA	1185926	1185999	.	-	.	ID=GCA000560365_01146;Name=tRNA-Arg(tct);locus_tag=GCA000560365_01146;product=tRNA-Arg(tct);gene=trnR;anti_codon=tct;amino_acid=Arg;Parent=GCA000560365_01146_gene;inference=profile:tRNAscan:2.0;Note=SO:0001036
contig_1	Pyrodigal	gene	1186363	1186497	.	+	.	ID=GCA000560365_01147_gene;locus_tag=GCA000560365_01147
contig_1	Pyrodigal	CDS	1186363	1186497	.	+	0	ID=GCA000560365_01147;Name=Beta-class phenol-soluble modulin;locus_tag=GCA000560365_01147;product=Beta-class phenol-soluble modulin;Parent=GCA000560365_01147_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K20337,RefSeq:WP_000398672.1,SO:0001217,UniParc:UPI00000D9D8F,UniRef:UniRef100_Q2FZA4,UniRef:UniRef50_P11697,UniRef:UniRef90_Q2FZA4
contig_1	Pyrodigal	gene	1186554	1186688	.	+	.	ID=GCA000560365_01148_gene;locus_tag=GCA000560365_01148
contig_1	Pyrodigal	CDS	1186554	1186688	.	+	0	ID=GCA000560365_01148;Name=Beta-class phenol-soluble modulin;locus_tag=GCA000560365_01148;product=Beta-class phenol-soluble modulin;Parent=GCA000560365_01148_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K20337,RefSeq:WP_000147103.1,SO:0001217,UniParc:UPI00000543D5,UniRef:UniRef100_Q2FZA3,UniRef:UniRef50_P11697,UniRef:UniRef90_Q2FZA3
contig_1	Pyrodigal	gene	1186821	1187507	.	+	.	ID=GCA000560365_01149_gene;locus_tag=GCA000560365_01149;gene=yigB
contig_1	Pyrodigal	CDS	1186821	1187507	.	+	0	ID=GCA000560365_01149;Name=YjjG family noncanonical pyrimidine nucleotidase;locus_tag=GCA000560365_01149;product=YjjG family noncanonical pyrimidine nucleotidase;Dbxref=GO:0008253;gene=yigB;Parent=GCA000560365_01149_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1011,COG:H,SO:0001217,UniParc:UPI00000D76F2,UniRef:UniRef100_W8UYI1,UniRef:UniRef50_Q2FZA2,UniRef:UniRef90_Q2FZA2;ec_number=3.1.3.5
contig_1	Pyrodigal	gene	1187616	1188056	.	-	.	ID=GCA000560365_01150_gene;locus_tag=GCA000560365_01150
contig_1	Pyrodigal	CDS	1187616	1188056	.	-	0	ID=GCA000560365_01150;Name=N-acetyltransferase;locus_tag=GCA000560365_01150;product=N-acetyltransferase;Dbxref=GO:0008080,GO:0016747;Parent=GCA000560365_01150_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001289711.1,SO:0001217,UniParc:UPI00000543D3,UniRef:UniRef100_Q99UT4,UniRef:UniRef50_Q8CSY0,UniRef:UniRef90_Q99UT4;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	1188251	1189864	.	+	.	ID=GCA000560365_01151_gene;locus_tag=GCA000560365_01151;gene=bshC
contig_1	Pyrodigal	CDS	1188251	1189864	.	+	0	ID=GCA000560365_01151;Name=bacillithiol biosynthesis cysteine-adding enzyme BshC;locus_tag=GCA000560365_01151;product=bacillithiol biosynthesis cysteine-adding enzyme BshC;Dbxref=GO:0003824,GO:0016874,GO:0071793;gene=bshC;Parent=GCA000560365_01151_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4365,COG:Q,KEGG:K22136,RefSeq:WP_000340475.1,SO:0001217,UniParc:UPI00000D9D90,UniRef:UniRef100_Q2FHR0,UniRef:UniRef50_Q2FZ98,UniRef:UniRef90_Q2FZ98;ec_number=6.-.-.-
contig_1	Pyrodigal	gene	1190008	1190439	.	+	.	ID=GCA000560365_01152_gene;locus_tag=GCA000560365_01152;gene=mraZ
contig_1	Pyrodigal	CDS	1190008	1190439	.	+	0	ID=GCA000560365_01152;Name=division/cell wall cluster transcriptional repressor MraZ;locus_tag=GCA000560365_01152;product=division/cell wall cluster transcriptional repressor MraZ;Dbxref=GO:0000976,GO:0003700,GO:0005737,GO:0006355,GO:0009295,GO:2000143;gene=mraZ;Parent=GCA000560365_01152_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2001,COG:J,RefSeq:WP_000480800.1,SO:0001217,UniParc:UPI00000543CE,UniRef:UniRef100_Q2FZ97,UniRef:UniRef50_Q8Y5L6,UniRef:UniRef90_Q2FZ97
contig_1	Pyrodigal	gene	1190455	1191390	.	+	.	ID=GCA000560365_01153_gene;locus_tag=GCA000560365_01153;gene=rsmH
contig_1	Pyrodigal	CDS	1190455	1191390	.	+	0	ID=GCA000560365_01153;Name=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;locus_tag=GCA000560365_01153;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;Dbxref=GO:0005737,GO:0016434,GO:0070475,GO:0071424;gene=rsmH;Parent=GCA000560365_01153_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0275,COG:J,KEGG:K03438,RefSeq:WP_000468384.1,SO:0001217,UniParc:UPI000012F4FC,UniRef:UniRef100_P60393,UniRef:UniRef50_Q07876,UniRef:UniRef90_P60393;ec_number=2.1.1.199
contig_1	Pyrodigal	gene	1191404	1191805	.	+	.	ID=GCA000560365_01154_gene;locus_tag=GCA000560365_01154;gene=ftsL
contig_1	Pyrodigal	CDS	1191404	1191805	.	+	0	ID=GCA000560365_01154;Name=cell division protein FtsL;locus_tag=GCA000560365_01154;product=cell division protein FtsL;Dbxref=GO:0000910,GO:0005886,GO:0016020,GO:0032153,GO:0043093;gene=ftsL;Parent=GCA000560365_01154_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4839,COG:D,KEGG:K03586,RefSeq:WP_000257598.1,SO:0001217,UniParc:UPI00000338FA,UniRef:UniRef100_Q2FZ95,UniRef:UniRef50_Q2FZ95,UniRef:UniRef90_Q2FZ95
contig_1	Pyrodigal	gene	1191786	1194020	.	+	.	ID=GCA000560365_01155_gene;locus_tag=GCA000560365_01155;gene=ftsI
contig_1	Pyrodigal	CDS	1191786	1194020	.	+	0	ID=GCA000560365_01155;Name=Cell division protein FtsI (Peptidoglycan synthetase);locus_tag=GCA000560365_01155;product=Cell division protein FtsI (Peptidoglycan synthetase);gene=ftsI;Parent=GCA000560365_01155_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2815,COG:M,KEGG:K12552,RefSeq:WP_001118663.1,SO:0001217,UniParc:UPI00000543CC,UniRef:UniRef100_Q2FZ94,UniRef:UniRef50_A0A640MVC3,UniRef:UniRef90_A0A218M1I3;ec_number=3.4.-.-
contig_1	Pyrodigal	gene	1194312	1195277	.	+	.	ID=GCA000560365_01156_gene;locus_tag=GCA000560365_01156;gene=mraY
contig_1	Pyrodigal	CDS	1194312	1195277	.	+	0	ID=GCA000560365_01156;Name=phospho-N-acetylmuramoyl-pentapeptide-transferase;locus_tag=GCA000560365_01156;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;Dbxref=GO:0005886,GO:0008360,GO:0008963,GO:0009252,GO:0016020,GO:0046872,GO:0051301,GO:0051992,GO:0071555;gene=mraY;Parent=GCA000560365_01156_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0472,COG:M,KEGG:K01000,RefSeq:WP_000578458.1,SO:0001217,UniParc:UPI00000543CB,UniRef:UniRef100_Q2FZ93,UniRef:UniRef50_Q2FZ93,UniRef:UniRef90_Q2FZ93;ec_number=2.7.8.13
contig_1	Pyrodigal	gene	1195279	1196628	.	+	.	ID=GCA000560365_01157_gene;locus_tag=GCA000560365_01157;gene=murD
contig_1	Pyrodigal	CDS	1195279	1196628	.	+	0	ID=GCA000560365_01157;Name=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;locus_tag=GCA000560365_01157;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;Dbxref=GO:0005524,GO:0005737,GO:0008360,GO:0008764,GO:0009252,GO:0051301,GO:0071555;gene=murD;Parent=GCA000560365_01157_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0771,COG:M,RefSeq:WP_000935991.1,SO:0001217,UniParc:UPI000012F989,UniRef:UniRef100_Q2FZ92,UniRef:UniRef50_Q2FZ92,UniRef:UniRef90_Q2FZ92;ec_number=6.3.2.9
contig_1	Pyrodigal	gene	1196644	1197963	.	+	.	ID=GCA000560365_01158_gene;locus_tag=GCA000560365_01158;gene=divIB
contig_1	Pyrodigal	CDS	1196644	1197963	.	+	0	ID=GCA000560365_01158;Name=Cell division protein DivIB;locus_tag=GCA000560365_01158;product=Cell division protein DivIB;Dbxref=GO:0005886,GO:0032153,GO:0043093;gene=divIB;Parent=GCA000560365_01158_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1589,COG:D,RefSeq:WP_000342185.1,SO:0001217,UniParc:UPI00000BE21A,UniRef:UniRef100_Q2FZ91,UniRef:UniRef50_Q2FZ91,UniRef:UniRef90_Q2FZ91
contig_1	Pyrodigal	gene	1198069	1199481	.	+	.	ID=GCA000560365_01159_gene;locus_tag=GCA000560365_01159;gene=ftsA
contig_1	Pyrodigal	CDS	1198069	1199481	.	+	0	ID=GCA000560365_01159;Name=cell division protein FtsA;locus_tag=GCA000560365_01159;product=cell division protein FtsA;Dbxref=GO:0005515,GO:0005524,GO:0009898,GO:0032153,GO:0043093;gene=ftsA;Parent=GCA000560365_01159_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0849,COG:D,RefSeq:WP_000391031.1,SO:0001217,UniParc:UPI00000543C8,UniRef:UniRef100_O07325,UniRef:UniRef50_O07325,UniRef:UniRef90_O07325
contig_1	Pyrodigal	gene	1199514	1200686	.	+	.	ID=GCA000560365_01160_gene;locus_tag=GCA000560365_01160;gene=ftsZ
contig_1	Pyrodigal	CDS	1199514	1200686	.	+	0	ID=GCA000560365_01160;Name=cell division protein FtsZ;locus_tag=GCA000560365_01160;product=cell division protein FtsZ;Dbxref=GO:0000910,GO:0000917,GO:0003924,GO:0005525,GO:0005737,GO:0032153,GO:0043093,GO:0051258;gene=ftsZ;Parent=GCA000560365_01160_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0206,COG:D,KEGG:K03531,RefSeq:WP_000888997.1,SO:0001217,UniParc:UPI00000543C7,UniRef:UniRef100_Q2FZ89,UniRef:UniRef50_Q2FZ89,UniRef:UniRef90_Q2FZ89
contig_1	Pyrodigal	gene	1200946	1201737	.	+	.	ID=GCA000560365_01161_gene;locus_tag=GCA000560365_01161;gene=pgeF
contig_1	Pyrodigal	CDS	1200946	1201737	.	+	0	ID=GCA000560365_01161;Name=peptidoglycan editing factor PgeF;locus_tag=GCA000560365_01161;product=peptidoglycan editing factor PgeF;Dbxref=GO:0004000,GO:0005507,GO:0016491,GO:0017061,GO:0046936;gene=pgeF;Parent=GCA000560365_01161_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1496,COG:P,KEGG:K05810,RefSeq:WP_000999338.1,SO:0001217,UniParc:UPI00004B5BB7,UniRef:UniRef100_Q5HGP4,UniRef:UniRef50_Q49WW9,UniRef:UniRef90_Q99US8;ec_number=2.4.2.1
contig_1	Pyrodigal	gene	1201761	1202429	.	+	.	ID=GCA000560365_01162_gene;locus_tag=GCA000560365_01162;gene=yggS
contig_1	Pyrodigal	CDS	1201761	1202429	.	+	0	ID=GCA000560365_01162;Name=Pyridoxal phosphate homeostasis protein;locus_tag=GCA000560365_01162;product=Pyridoxal phosphate homeostasis protein;gene=yggS;Parent=GCA000560365_01162_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0325,COG:H,RefSeq:WP_001548498.1,SO:0001217,UniParc:UPI0000696C16,UniRef:UniRef100_Q2FZ87,UniRef:UniRef50_U2FRM0,UniRef:UniRef90_Q9ZHA3
contig_1	Pyrodigal	gene	1202426	1202989	.	+	.	ID=GCA000560365_01163_gene;locus_tag=GCA000560365_01163;gene=sepF
contig_1	Pyrodigal	CDS	1202426	1202989	.	+	0	ID=GCA000560365_01163;Name=Cell division protein SepF;locus_tag=GCA000560365_01163;product=Cell division protein SepF;Dbxref=GO:0000917,GO:0005737,GO:0043093;gene=sepF;Parent=GCA000560365_01163_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1799,COG:D,RefSeq:WP_000018608.1,SO:0001217,UniParc:UPI00000D7683,UniRef:UniRef100_Q2FZ86,UniRef:UniRef50_Q2FZ86,UniRef:UniRef90_Q2FZ86
contig_1	Pyrodigal	gene	1203001	1203291	.	+	.	ID=GCA000560365_01164_gene;locus_tag=GCA000560365_01164;gene=yggT
contig_1	Pyrodigal	CDS	1203001	1203291	.	+	0	ID=GCA000560365_01164;Name=YggT family protein;locus_tag=GCA000560365_01164;product=YggT family protein;gene=yggT;Parent=GCA000560365_01164_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0762,COG:O,KEGG:K02221,RefSeq:WP_000354114.1,SO:0001217,UniParc:UPI00000543C2,UniRef:UniRef100_Q2FZ85,UniRef:UniRef50_Q2FZ85,UniRef:UniRef90_Q2FZ85
contig_1	Pyrodigal	gene	1203374	1204180	.	+	.	ID=GCA000560365_01165_gene;locus_tag=GCA000560365_01165;gene=ylmH
contig_1	Pyrodigal	CDS	1203374	1204180	.	+	0	ID=GCA000560365_01165;Name=RNA-binding S4 domain-containing protein;locus_tag=GCA000560365_01165;product=RNA-binding S4 domain-containing protein;gene=ylmH;Parent=GCA000560365_01165_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2302,COG:J,RefSeq:WP_000232509.1,SO:0001217,UniParc:UPI00000543C1,UniRef:UniRef100_Q2FZ84,UniRef:UniRef50_Q2FZ84,UniRef:UniRef90_Q2FZ84
contig_1	Pyrodigal	gene	1204204	1204821	.	+	.	ID=GCA000560365_01166_gene;locus_tag=GCA000560365_01166;gene=divIVA
contig_1	Pyrodigal	CDS	1204204	1204821	.	+	0	ID=GCA000560365_01166;Name=DivIVA domain-containing protein;locus_tag=GCA000560365_01166;product=DivIVA domain-containing protein;gene=divIVA;Parent=GCA000560365_01166_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3599,COG:D,RefSeq:WP_001117064.1,SO:0001217,UniParc:UPI00000543C0,UniRef:UniRef100_Q2FZ83,UniRef:UniRef50_Q2FZ83,UniRef:UniRef90_Q2FZ83
contig_1	Pyrodigal	gene	1205042	1207795	.	+	.	ID=GCA000560365_01167_gene;locus_tag=GCA000560365_01167;gene=ileS
contig_1	Pyrodigal	CDS	1205042	1207795	.	+	0	ID=GCA000560365_01167;Name=isoleucine--tRNA ligase;locus_tag=GCA000560365_01167;product=isoleucine--tRNA ligase;Dbxref=GO:0000049,GO:0000166,GO:0002161,GO:0004822,GO:0005524,GO:0005829,GO:0006428,GO:0008270;gene=ileS;Parent=GCA000560365_01167_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0060,COG:J,RefSeq:WP_000384691.1,SO:0001217,UniParc:UPI00000CABC4,UniRef:UniRef100_Q2FZ82,UniRef:UniRef50_P41972,UniRef:UniRef90_P41972;ec_number=6.1.1.5
contig_1	Pyrodigal	gene	1208085	1208882	.	+	.	ID=GCA000560365_01168_gene;locus_tag=GCA000560365_01168;gene=catE
contig_1	Pyrodigal	CDS	1208085	1208882	.	+	0	ID=GCA000560365_01168;Name=Glyoxalase;locus_tag=GCA000560365_01168;product=Glyoxalase;gene=catE;Parent=GCA000560365_01168_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2514,COG:Q,RefSeq:WP_000274844.1,SO:0001217,UniParc:UPI00000543BE,UniRef:UniRef100_Q2FZ81,UniRef:UniRef50_A0AAP7IFI2,UniRef:UniRef90_A0A0D1JNZ5
contig_1	Pyrodigal	gene	1208943	1209137	.	-	.	ID=GCA000560365_01169_gene;locus_tag=GCA000560365_01169
contig_1	Pyrodigal	CDS	1208943	1209137	.	-	0	ID=GCA000560365_01169;Name=Truncated transposase for IS1272;locus_tag=GCA000560365_01169;product=Truncated transposase for IS1272;Parent=GCA000560365_01169_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001C14C6C,UniRef:UniRef100_A0A0D6HS26,UniRef:UniRef50_Q4L350,UniRef:UniRef90_A0A0H3K9W4
contig_1	Infernal	gene	1209149	1209381	.	+	.	ID=GCA000560365_01170_gene;locus_tag=GCA000560365_01170;gene=tsr24
contig_1	Infernal	ncRNA	1209149	1209381	3.6e-16	+	.	ID=GCA000560365_01170;Name=S. aureus tsr24 small RNA;locus_tag=GCA000560365_01170;product=S. aureus tsr24 small RNA;Dbxref=RFAM:RF02577;Parent=GCA000560365_01170_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02577
contig_1	Pyrodigal	gene	1209706	1210197	.	+	.	ID=GCA000560365_01171_gene;locus_tag=GCA000560365_01171;gene=lspA
contig_1	Pyrodigal	CDS	1209706	1210197	.	+	0	ID=GCA000560365_01171;Name=signal peptidase II;locus_tag=GCA000560365_01171;product=signal peptidase II;Dbxref=GO:0004190,GO:0005886,GO:0006508,GO:0009306;gene=lspA;Parent=GCA000560365_01171_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0597,COG:MU,KEGG:K03101,RefSeq:WP_000549207.1,SO:0001217,UniParc:UPI00000D7816,UniRef:UniRef100_Q2FZ79,UniRef:UniRef50_Q8CPK0,UniRef:UniRef90_Q6GHN9;ec_number=3.4.23.36
contig_1	Pyrodigal	gene	1210197	1211114	.	+	.	ID=GCA000560365_01172_gene;locus_tag=GCA000560365_01172;gene=rluA
contig_1	Pyrodigal	CDS	1210197	1211114	.	+	0	ID=GCA000560365_01172;Name=Pseudouridine synthase;locus_tag=GCA000560365_01172;product=Pseudouridine synthase;gene=rluA;Parent=GCA000560365_01172_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0564,COG:J,KEGG:K06180,RefSeq:WP_000451295.1,SO:0001217,UniParc:UPI0000696C17,UniRef:UniRef100_A0A1S5Z2V6,UniRef:UniRef50_A5I1V5,UniRef:UniRef90_A0A380EGR6;ec_number=5.4.99.23
contig_1	Pyrodigal	gene	1211513	1212040	.	+	.	ID=GCA000560365_01173_gene;locus_tag=GCA000560365_01173;gene=pyrR
contig_1	Pyrodigal	CDS	1211513	1212040	.	+	0	ID=GCA000560365_01173;Name=bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;locus_tag=GCA000560365_01173;product=bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;Dbxref=GO:0003723,GO:0004845,GO:0006353;gene=pyrR;Parent=GCA000560365_01173_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2065,COG:F,KEGG:K02825,RefSeq:WP_000003870.1,SO:0001217,UniParc:UPI00000543B9,UniRef:UniRef100_Q2FZ77,UniRef:UniRef50_Q9K9V4,UniRef:UniRef90_Q2FZ77;ec_number=2.4.2.9
contig_1	Pyrodigal	gene	1212258	1213565	.	+	.	ID=GCA000560365_01174_gene;locus_tag=GCA000560365_01174;gene=uraA
contig_1	Pyrodigal	CDS	1212258	1213565	.	+	0	ID=GCA000560365_01174;Name=Uracil permease%2C putative;locus_tag=GCA000560365_01174;product=Uracil permease%2C putative;gene=uraA;Parent=GCA000560365_01174_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2233,COG:F,RefSeq:WP_001178619.1,SO:0001217,UniParc:UPI00000D7719,UniRef:UniRef100_Q2FZ76,UniRef:UniRef50_P39766,UniRef:UniRef90_Q2FZ76
contig_1	Pyrodigal	gene	1213593	1214474	.	+	.	ID=GCA000560365_01175_gene;locus_tag=GCA000560365_01175;gene=pyrB
contig_1	Pyrodigal	CDS	1213593	1214474	.	+	0	ID=GCA000560365_01175;Name=aspartate carbamoyltransferase catalytic subunit;locus_tag=GCA000560365_01175;product=aspartate carbamoyltransferase catalytic subunit;Dbxref=GO:0004070,GO:0005829,GO:0006207,GO:0006520,GO:0016597,GO:0044205;gene=pyrB;Parent=GCA000560365_01175_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0540,COG:F,RefSeq:WP_001016166.1,SO:0001217,UniParc:UPI00000543B7,UniRef:UniRef100_Q2FZ75,UniRef:UniRef50_P05654,UniRef:UniRef90_Q2FZ75;ec_number=2.1.3.2
contig_1	Pyrodigal	gene	1214489	1215766	.	+	.	ID=GCA000560365_01176_gene;locus_tag=GCA000560365_01176;gene=pyrC
contig_1	Pyrodigal	CDS	1214489	1215766	.	+	0	ID=GCA000560365_01176;Name=dihydroorotase;locus_tag=GCA000560365_01176;product=dihydroorotase;Dbxref=GO:0004038,GO:0004151,GO:0005737,GO:0006145,GO:0006221,GO:0008270,GO:0044205,GO:0046872;gene=pyrC;Parent=GCA000560365_01176_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0044,COG:F,SO:0001217,UniParc:UPI00000543B6,UniRef:UniRef100_Q5HGN1,UniRef:UniRef50_Q81WF0,UniRef:UniRef90_Q5HGN1;ec_number=3.5.2.3
contig_1	Pyrodigal	gene	1215768	1216868	.	+	.	ID=GCA000560365_01177_gene;locus_tag=GCA000560365_01177;gene=carA
contig_1	Pyrodigal	CDS	1215768	1216868	.	+	0	ID=GCA000560365_01177;Name=carbamoyl phosphate synthase small subunit;locus_tag=GCA000560365_01177;product=carbamoyl phosphate synthase small subunit;Dbxref=GO:0004088,GO:0004359,GO:0005524,GO:0006207,GO:0006526,GO:0006541,GO:0044205;gene=carA;Parent=GCA000560365_01177_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0505,COG:EF,RefSeq:WP_001190913.1,SO:0001217,UniParc:UPI00000543B5,UniRef:UniRef100_Q5HGN0,UniRef:UniRef50_P25993,UniRef:UniRef90_Q5HGN0;ec_number=6.3.5.5
contig_1	Pyrodigal	gene	1216861	1220034	.	+	.	ID=GCA000560365_01178_gene;locus_tag=GCA000560365_01178;gene=carB
contig_1	Pyrodigal	CDS	1216861	1220034	.	+	0	ID=GCA000560365_01178;Name=carbamoyl-phosphate synthase large subunit;locus_tag=GCA000560365_01178;product=carbamoyl-phosphate synthase large subunit;Dbxref=GO:0004087,GO:0004088,GO:0005524,GO:0005737,GO:0006526,GO:0006541,GO:0008152,GO:0044205,GO:0046872;gene=carB;Parent=GCA000560365_01178_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0458,COG:EF,KEGG:K01955,RefSeq:WP_001126264.1,SO:0001217,UniParc:UPI0000052291,UniRef:UniRef100_Q2FZ72,UniRef:UniRef50_P25994,UniRef:UniRef90_P63739;ec_number=6.3.5.5
contig_1	Pyrodigal	gene	1220144	1220836	.	+	.	ID=GCA000560365_01179_gene;locus_tag=GCA000560365_01179;gene=pyrF
contig_1	Pyrodigal	CDS	1220144	1220836	.	+	0	ID=GCA000560365_01179;Name=orotidine-5'-phosphate decarboxylase;locus_tag=GCA000560365_01179;product=orotidine-5'-phosphate decarboxylase;Dbxref=GO:0004590,GO:0005829,GO:0006207,GO:0044205;gene=pyrF;Parent=GCA000560365_01179_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0284,COG:F,RefSeq:WP_000654061.1,SO:0001217,UniParc:UPI00004B5BB9,UniRef:UniRef100_Q2FZ71,UniRef:UniRef50_P0CB75,UniRef:UniRef90_Q2FZ71;ec_number=4.1.1.23
contig_1	Pyrodigal	gene	1220836	1221447	.	+	.	ID=GCA000560365_01180_gene;locus_tag=GCA000560365_01180;gene=pyrE
contig_1	Pyrodigal	CDS	1220836	1221447	.	+	0	ID=GCA000560365_01180;Name=Orotate phosphoribosyltransferase;locus_tag=GCA000560365_01180;product=Orotate phosphoribosyltransferase;Dbxref=GO:0000287,GO:0004588,GO:0019856,GO:0044205;gene=pyrE;Parent=GCA000560365_01180_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0461,COG:F,RefSeq:WP_001040245.1,SO:0001217,UniParc:UPI00004B5BBA,UniRef:UniRef100_Q5HGM7,UniRef:UniRef50_P58856,UniRef:UniRef90_P65916;ec_number=2.4.2.10
contig_1	Pyrodigal	gene	1221477	1221689	.	+	.	ID=GCA000560365_01181_gene;locus_tag=GCA000560365_01181
contig_1	Pyrodigal	CDS	1221477	1221689	.	+	0	ID=GCA000560365_01181;Name=hypothetical protein;locus_tag=GCA000560365_01181;product=hypothetical protein;Parent=GCA000560365_01181_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000998556.1,SO:0001217,UniParc:UPI00004B5BBB,UniRef:UniRef100_A0A0E7KPZ9,UniRef:UniRef50_A0A2K4ADL6,UniRef:UniRef90_Q2FZ69
contig_1	Pyrodigal	gene	1222126	1222527	.	+	.	ID=GCA000560365_01182_gene;locus_tag=GCA000560365_01182
contig_1	Pyrodigal	CDS	1222126	1222527	.	+	0	ID=GCA000560365_01182;Name=PhnB-like domain-containing protein;locus_tag=GCA000560365_01182;product=PhnB-like domain-containing protein;Parent=GCA000560365_01182_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3865,COG:R,RefSeq:WP_000354184.1,SO:0001217,UniParc:UPI00000543B0,UniRef:UniRef100_Q2G1U2,UniRef:UniRef50_Q2G1U2,UniRef:UniRef90_Q2G1U2
contig_1	Pyrodigal	gene	1222790	1224487	.	-	.	ID=GCA000560365_01183_gene;locus_tag=GCA000560365_01183;gene=rqcH
contig_1	Pyrodigal	CDS	1222790	1224487	.	-	0	ID=GCA000560365_01183;Name=Rqc2-like protein RqcH;locus_tag=GCA000560365_01183;product=Rqc2-like protein RqcH;gene=rqcH;Parent=GCA000560365_01183_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1293,COG:JO,RefSeq:WP_000312763.1,SO:0001217,UniParc:UPI0000696C18,UniRef:UniRef100_A0A0E8GCM1,UniRef:UniRef50_Q5HPY2,UniRef:UniRef90_A0A0U1MIQ6
contig_1	Pyrodigal	gene	1224762	1225385	.	+	.	ID=GCA000560365_01184_gene;locus_tag=GCA000560365_01184;gene=gmk
contig_1	Pyrodigal	CDS	1224762	1225385	.	+	0	ID=GCA000560365_01184;Name=guanylate kinase;locus_tag=GCA000560365_01184;product=guanylate kinase;Dbxref=GO:0004385,GO:0005524,GO:0005829,GO:0006163;gene=gmk;Parent=GCA000560365_01184_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000368227.1,SO:0001217,UniParc:UPI00000543AE,UniRef:UniRef100_Q2G1U0,UniRef:UniRef50_Q8Y672,UniRef:UniRef90_Q2G1U0;ec_number=2.7.4.8
contig_1	Pyrodigal	gene	1225385	1225603	.	+	.	ID=GCA000560365_01185_gene;locus_tag=GCA000560365_01185;gene=rpoZ
contig_1	Pyrodigal	CDS	1225385	1225603	.	+	0	ID=GCA000560365_01185;Name=DNA-directed RNA polymerase subunit omega;locus_tag=GCA000560365_01185;product=DNA-directed RNA polymerase subunit omega;Dbxref=GO:0000428,GO:0001054,GO:0001055,GO:0001056,GO:0001057,GO:0001058,GO:0001066,GO:0003677,GO:0003899,GO:0006351;gene=rpoZ;Parent=GCA000560365_01185_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1758,COG:K,RefSeq:WP_000933956.1,SO:0001217,UniParc:UPI00000543AD,UniRef:UniRef100_Q2G1T9,UniRef:UniRef50_Q2G1T9,UniRef:UniRef90_Q2G1T9;ec_number=2.7.7.6
contig_1	Pyrodigal	gene	1225819	1227018	.	+	.	ID=GCA000560365_01186_gene;locus_tag=GCA000560365_01186;gene=coaBC
contig_1	Pyrodigal	CDS	1225819	1227018	.	+	0	ID=GCA000560365_01186;Name=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;locus_tag=GCA000560365_01186;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;Dbxref=GO:0004632,GO:0004633,GO:0010181,GO:0015937,GO:0015941;gene=coaBC;Parent=GCA000560365_01186_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0452,COG:H,RefSeq:WP_031808143.1,SO:0001217,UniParc:UPI000450029B,UniRef:UniRef100_UPI000450029B,UniRef:UniRef50_W4QPQ9,UniRef:UniRef90_Q2G268;ec_number=6.3.2.5
contig_1	Pyrodigal	gene	1227018	1229426	.	+	.	ID=GCA000560365_01187_gene;locus_tag=GCA000560365_01187;gene=priA
contig_1	Pyrodigal	CDS	1227018	1229426	.	+	0	ID=GCA000560365_01187;Name=primosomal protein N';locus_tag=GCA000560365_01187;product=primosomal protein N';Dbxref=GO:0003678,GO:0006260,GO:0032508;gene=priA;Parent=GCA000560365_01187_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1198,COG:L,RefSeq:WP_000560841.1,SO:0001217,UniParc:UPI00004B5BBD,UniRef:UniRef100_Q2G266,UniRef:UniRef50_A0A0B8RHA5,UniRef:UniRef90_A0A7Z7W1D5;ec_number=3.6.1.-
contig_1	Pyrodigal	gene	1229932	1230885	.	+	.	ID=GCA000560365_01188_gene;locus_tag=GCA000560365_01188
contig_1	Pyrodigal	CDS	1229932	1230885	.	+	0	ID=GCA000560365_01188;Name=Lipoprotein;locus_tag=GCA000560365_01188;product=Lipoprotein;Parent=GCA000560365_01188_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000751704.1,SO:0001217,UniParc:UPI00000543AA,UniRef:UniRef100_Q2G264,UniRef:UniRef50_Q2G264,UniRef:UniRef90_Q2G264
contig_1	Pyrodigal	gene	1231048	1231326	.	-	.	ID=GCA000560365_01189_gene;locus_tag=GCA000560365_01189;gene=tM2
contig_1	Pyrodigal	CDS	1231048	1231326	.	-	0	ID=GCA000560365_01189;Name=TM2 domain-containing protein;locus_tag=GCA000560365_01189;product=TM2 domain-containing protein;gene=tM2;Parent=GCA000560365_01189_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2314,COG:R,RefSeq:WP_001548522.1,SO:0001217,UniParc:UPI00000543A8,UniRef:UniRef100_Q2G267,UniRef:UniRef50_Q2G267,UniRef:UniRef90_Q2G267
contig_1	Pyrodigal	gene	1231550	1232038	.	+	.	ID=GCA000560365_01190_gene;locus_tag=GCA000560365_01190;gene=def
contig_1	Pyrodigal	CDS	1231550	1232038	.	+	0	ID=GCA000560365_01190;Name=peptide deformylase;locus_tag=GCA000560365_01190;product=peptide deformylase;Dbxref=GO:0006412,GO:0042586,GO:0043686;gene=def;Parent=GCA000560365_01190_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0242,COG:J,KEGG:K01462,RefSeq:WP_000985293.1,SO:0001217,UniParc:UPI00000543A7,UniRef:UniRef100_Q5HGL7,UniRef:UniRef50_Q5HPX6,UniRef:UniRef90_Q5HGL7;ec_number=3.5.1.88
contig_1	Pyrodigal	gene	1232031	1232966	.	+	.	ID=GCA000560365_01191_gene;locus_tag=GCA000560365_01191;gene=fmt
contig_1	Pyrodigal	CDS	1232031	1232966	.	+	0	ID=GCA000560365_01191;Name=methionyl-tRNA formyltransferase;locus_tag=GCA000560365_01191;product=methionyl-tRNA formyltransferase;Dbxref=GO:0004479,GO:0005737,GO:0005829,GO:0071951;gene=fmt;Parent=GCA000560365_01191_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0223,COG:J,RefSeq:WP_000161299.1,SO:0001217,UniParc:UPI00000543A6,UniRef:UniRef100_Q2FZ68,UniRef:UniRef50_P94463,UniRef:UniRef90_Q2FZ68;ec_number=2.1.2.9
contig_1	Pyrodigal	gene	1232963	1234270	.	+	.	ID=GCA000560365_01192_gene;locus_tag=GCA000560365_01192;gene=rsmB
contig_1	Pyrodigal	CDS	1232963	1234270	.	+	0	ID=GCA000560365_01192;Name=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;locus_tag=GCA000560365_01192;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;Dbxref=GO:0001510,GO:0003723,GO:0006355,GO:0008168;gene=rsmB;Parent=GCA000560365_01192_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0781,COG:K,KEGG:K03500,RefSeq:WP_000572235.1,SO:0001217,UniParc:UPI00004B5BBE,UniRef:UniRef100_A0A0H3JKS7,UniRef:UniRef50_A0A2T4MK73,UniRef:UniRef90_A0A7U7JU44;ec_number=2.1.1.176
contig_1	Pyrodigal	gene	1234273	1235367	.	+	.	ID=GCA000560365_01193_gene;locus_tag=GCA000560365_01193;gene=rlmN
contig_1	Pyrodigal	CDS	1234273	1235367	.	+	0	ID=GCA000560365_01193;Name=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;locus_tag=GCA000560365_01193;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;Dbxref=GO:0000049,GO:0002935,GO:0005737,GO:0008757,GO:0016433,GO:0019843,GO:0030488,GO:0046677,GO:0046872,GO:0051539,GO:0070040,GO:0070475;gene=rlmN;Parent=GCA000560365_01193_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0820,COG:J,KEGG:K06941,RefSeq:WP_000626897.1,SO:0001217,UniParc:UPI00000543A4,UniRef:UniRef100_Q2FZ66,UniRef:UniRef50_O34617,UniRef:UniRef90_Q2FZ66;ec_number=2.1.1.192
contig_1	Pyrodigal	gene	1235374	1236117	.	+	.	ID=GCA000560365_01194_gene;locus_tag=GCA000560365_01194;gene=pTC1
contig_1	Pyrodigal	CDS	1235374	1236117	.	+	0	ID=GCA000560365_01194;Name=protein-serine/threonine phosphatase Stp1;locus_tag=GCA000560365_01194;product=protein-serine/threonine phosphatase Stp1;Dbxref=GO:0004722,GO:0006470;gene=pTC1;Parent=GCA000560365_01194_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000888494,COG:COG0631,COG:T,KEGG:K20074,RefSeq:WP_000888494.1,SO:0001217,UniParc:UPI00000543A3,UniRef:UniRef100_Q2FZ65,UniRef:UniRef50_A0A0D0SSN4,UniRef:UniRef90_A0A7U7PY84;ec_number=3.1.3.16
contig_1	Pyrodigal	gene	1236114	1238108	.	+	.	ID=GCA000560365_01195_gene;locus_tag=GCA000560365_01195;gene=pknB
contig_1	Pyrodigal	CDS	1236114	1238108	.	+	0	ID=GCA000560365_01195;Name=serine/threonine protein kinase Stk1;locus_tag=GCA000560365_01195;product=serine/threonine protein kinase Stk1;Dbxref=GO:0004672,GO:0004674,GO:0004676,GO:0004677,GO:0004679,GO:0004711,GO:0005524,GO:0005886,GO:0006468,GO:0007165,GO:0009847,GO:0035175,GO:0035402,GO:0035403,GO:0035979,GO:0042834,GO:0044022,GO:0044023,GO:0044024,GO:0044025,GO:0071224,GO:0072354,GO:0072371,GO:0072518,GO:0106310,GO:0140823,GO:0140855,GO:0140857,GO:1990244;gene=pknB;Parent=GCA000560365_01195_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000579564,COG:COG2815,COG:M,RefSeq:WP_000579564.1,SO:0001217,UniParc:UPI00000543A2,UniRef:UniRef100_A6QGC0,UniRef:UniRef50_A6QGC0,UniRef:UniRef90_A6QGC0;ec_number=2.7.11.1
contig_1	Pyrodigal	gene	1238336	1239211	.	+	.	ID=GCA000560365_01196_gene;locus_tag=GCA000560365_01196;gene=rsgA
contig_1	Pyrodigal	CDS	1238336	1239211	.	+	0	ID=GCA000560365_01196;Name=ribosome small subunit-dependent GTPase A;locus_tag=GCA000560365_01196;product=ribosome small subunit-dependent GTPase A;Dbxref=GO:0003924,GO:0005525,GO:0005737,GO:0006412,GO:0019843,GO:0042274,GO:0043022,GO:0046872;gene=rsgA;Parent=GCA000560365_01196_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1162,COG:J,KEGG:K06949,RefSeq:WP_000847933.1,SO:0001217,UniParc:UPI00000B66AD,UniRef:UniRef100_Q9KX08,UniRef:UniRef50_Q8CSV8,UniRef:UniRef90_Q9KX08;ec_number=3.6.1.-
contig_1	Pyrodigal	gene	1239212	1239856	.	+	.	ID=GCA000560365_01197_gene;locus_tag=GCA000560365_01197;gene=rpe
contig_1	Pyrodigal	CDS	1239212	1239856	.	+	0	ID=GCA000560365_01197;Name=ribulose-phosphate 3-epimerase;locus_tag=GCA000560365_01197;product=ribulose-phosphate 3-epimerase;Dbxref=GO:0004750,GO:0006098;gene=rpe;Parent=GCA000560365_01197_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0036,COG:G,KEGG:K01783,RefSeq:WP_000164332.1,SO:0001217,UniParc:UPI00000543A0,UniRef:UniRef100_Q2FZ62,UniRef:UniRef50_A0A931T8B0,UniRef:UniRef90_Q2FZ62;ec_number=5.1.3.1
contig_1	Pyrodigal	gene	1239863	1240504	.	+	.	ID=GCA000560365_01198_gene;locus_tag=GCA000560365_01198;gene=thiN
contig_1	Pyrodigal	CDS	1239863	1240504	.	+	0	ID=GCA000560365_01198;Name=thiamine diphosphokinase;locus_tag=GCA000560365_01198;product=thiamine diphosphokinase;Dbxref=GO:0004788,GO:0006772;gene=thiN;Parent=GCA000560365_01198_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1564,COG:H,KEGG:K00949,RefSeq:WP_000547905.1,SO:0001217,UniParc:UPI00000D9DA1,UniRef:UniRef100_Q2FZ61,UniRef:UniRef50_A0A380G740,UniRef:UniRef90_A0A3A5LHB3;ec_number=2.7.6.2
contig_1	Pyrodigal	gene	1240885	1241073	.	-	.	ID=GCA000560365_01199_gene;locus_tag=GCA000560365_01199;gene=rpmB
contig_1	Pyrodigal	CDS	1240885	1241073	.	-	0	ID=GCA000560365_01199;Name=50S ribosomal protein L28;locus_tag=GCA000560365_01199;product=50S ribosomal protein L28;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:1990904;gene=rpmB;Parent=GCA000560365_01199_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0227,COG:J,RefSeq:WP_000517908.1,SO:0001217,UniParc:UPI000005439D,UniRef:UniRef100_Q2FZ60,UniRef:UniRef50_Q82ZE4,UniRef:UniRef90_Q49X05
contig_1	Pyrodigal	gene	1241516	1241890	.	+	.	ID=GCA000560365_01200_gene;locus_tag=GCA000560365_01200;gene=yloU
contig_1	Pyrodigal	CDS	1241516	1241890	.	+	0	ID=GCA000560365_01200;Name=Alkaline shock protein 23;locus_tag=GCA000560365_01200;product=Alkaline shock protein 23;gene=yloU;Parent=GCA000560365_01200_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1302,COG:S,RefSeq:WP_000171418.1,SO:0001217,UniParc:UPI00000D7669,UniRef:UniRef100_Q2FZ59,UniRef:UniRef50_O34318,UniRef:UniRef90_A0A7U7JU57
contig_1	Pyrodigal	gene	1241905	1243551	.	+	.	ID=GCA000560365_01201_gene;locus_tag=GCA000560365_01201;gene=fakA
contig_1	Pyrodigal	CDS	1241905	1243551	.	+	0	ID=GCA000560365_01201;Name=fatty acid kinase catalytic subunit FakA;locus_tag=GCA000560365_01201;product=fatty acid kinase catalytic subunit FakA;Dbxref=GO:0004371,GO:0006071;gene=fakA;Parent=GCA000560365_01201_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1461,COG:I,RefSeq:WP_000623903.1,SO:0001217,UniParc:UPI00000CAC97,UniRef:UniRef100_Q2FZ58,UniRef:UniRef50_O34751,UniRef:UniRef90_Q2FZ58
contig_1	Pyrodigal	gene	1243741	1245801	.	+	.	ID=GCA000560365_01202_gene;locus_tag=GCA000560365_01202;gene=recG
contig_1	Pyrodigal	CDS	1243741	1245801	.	+	0	ID=GCA000560365_01202;Name=ATP-dependent DNA helicase RecG;locus_tag=GCA000560365_01202;product=ATP-dependent DNA helicase RecG;Dbxref=GO:0003676,GO:0003677,GO:0003678,GO:0003689,GO:0005524,GO:0006281,GO:0006310,GO:0009378,GO:0016853,GO:0016887,GO:0036121,GO:0061749,GO:0061775,GO:0140584,GO:0140665,GO:0140849,GO:1990518;gene=recG;Parent=GCA000560365_01202_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1200,COG:L,KEGG:K03655,RefSeq:WP_001151499.1,SO:0001217,UniParc:UPI000013357F,UniRef:UniRef100_O50581,UniRef:UniRef50_O50581,UniRef:UniRef90_O50581;ec_number=5.6.2.4
contig_1	Pyrodigal	gene	1246004	1246576	.	+	.	ID=GCA000560365_01203_gene;locus_tag=GCA000560365_01203;gene=fapR
contig_1	Pyrodigal	CDS	1246004	1246576	.	+	0	ID=GCA000560365_01203;Name=transcription factor FapR;locus_tag=GCA000560365_01203;product=transcription factor FapR;Dbxref=GO:0003677,GO:0003700,GO:0006633,GO:0045717,GO:0045892;gene=fapR;Parent=GCA000560365_01203_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2050,COG:Q,RefSeq:WP_001548538.1,SO:0001217,UniParc:UPI0000054B2F,UniRef:UniRef100_Q2FZ56,UniRef:UniRef50_Q4L5T0,UniRef:UniRef90_Q5HGK5
contig_1	Pyrodigal	gene	1246581	1247567	.	+	.	ID=GCA000560365_01204_gene;locus_tag=GCA000560365_01204;gene=plsX
contig_1	Pyrodigal	CDS	1246581	1247567	.	+	0	ID=GCA000560365_01204;Name=phosphate acyltransferase PlsX;locus_tag=GCA000560365_01204;product=phosphate acyltransferase PlsX;Dbxref=GO:0005737,GO:0006633,GO:0008610,GO:0008654,GO:0043811;gene=plsX;Parent=GCA000560365_01204_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0416,COG:I,KEGG:K03621,RefSeq:WP_000239744.1,SO:0001217,UniParc:UPI0000050D3F,UniRef:UniRef100_Q2FZ55,UniRef:UniRef50_P71018,UniRef:UniRef90_Q2FZ55;ec_number=2.3.1.274
contig_1	Pyrodigal	gene	1247560	1248486	.	+	.	ID=GCA000560365_01205_gene;locus_tag=GCA000560365_01205;gene=fabD
contig_1	Pyrodigal	CDS	1247560	1248486	.	+	0	ID=GCA000560365_01205;Name=ACP S-malonyltransferase;locus_tag=GCA000560365_01205;product=ACP S-malonyltransferase;Dbxref=GO:0004314,GO:0005829,GO:0006633;gene=fabD;Parent=GCA000560365_01205_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0331,COG:I,RefSeq:WP_000047348.1,SO:0001217,UniParc:UPI00000BDE3F,UniRef:UniRef100_Q5HGK3,UniRef:UniRef50_Q99UN8,UniRef:UniRef90_Q99UN8;ec_number=2.3.1.39
contig_1	Pyrodigal	gene	1248479	1249213	.	+	.	ID=GCA000560365_01206_gene;locus_tag=GCA000560365_01206;gene=fabG
contig_1	Pyrodigal	CDS	1248479	1249213	.	+	0	ID=GCA000560365_01206;Name=3-oxoacyl-[acyl-carrier-protein] reductase;locus_tag=GCA000560365_01206;product=3-oxoacyl-[acyl-carrier-protein] reductase;Dbxref=GO:0004316,GO:0006633,GO:0030497,GO:0050661,GO:0051287;gene=fabG;Parent=GCA000560365_01206_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1028,COG:I,RefSeq:WP_000167269.1,SO:0001217,UniParc:UPI00004B5BBF,UniRef:UniRef100_Q2FZ53,UniRef:UniRef50_Q5HGK2,UniRef:UniRef90_Q5HGK2;ec_number=1.1.1.100
contig_1	Pyrodigal	gene	1249456	1249689	.	+	.	ID=GCA000560365_01207_gene;locus_tag=GCA000560365_01207;gene=acpP
contig_1	Pyrodigal	CDS	1249456	1249689	.	+	0	ID=GCA000560365_01207;Name=acyl carrier protein;locus_tag=GCA000560365_01207;product=acyl carrier protein;Dbxref=GO:0000035,GO:0000036,GO:0005829,GO:0006633,GO:0009245,GO:0016020,GO:0046677;gene=acpP;Parent=GCA000560365_01207_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0236,COG:I,RefSeq:WP_000426914.1,SO:0001217,UniParc:UPI0000125385,UniRef:UniRef100_Q2FZ51,UniRef:UniRef50_Q2FZ51,UniRef:UniRef90_Q2FZ51
contig_1	Pyrodigal	gene	1249805	1250536	.	+	.	ID=GCA000560365_01208_gene;locus_tag=GCA000560365_01208;gene=rnc
contig_1	Pyrodigal	CDS	1249805	1250536	.	+	0	ID=GCA000560365_01208;Name=ribonuclease III;locus_tag=GCA000560365_01208;product=ribonuclease III;Dbxref=GO:0003723,GO:0003725,GO:0004525,GO:0005829,GO:0006364,GO:0006396,GO:0006397,GO:0008033,GO:0010468,GO:0019843,GO:0046872;gene=rnc;Parent=GCA000560365_01208_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0571,COG:K,RefSeq:WP_000043237.1,SO:0001217,UniParc:UPI0000054AFA,UniRef:UniRef100_Q2FZ50,UniRef:UniRef50_Q2FZ50,UniRef:UniRef90_Q2FZ50;ec_number=3.1.26.3
contig_1	Pyrodigal	gene	1250683	1254249	.	+	.	ID=GCA000560365_01209_gene;locus_tag=GCA000560365_01209;gene=smc
contig_1	Pyrodigal	CDS	1250683	1254249	.	+	0	ID=GCA000560365_01209;Name=chromosome segregation protein SMC;locus_tag=GCA000560365_01209;product=chromosome segregation protein SMC;Dbxref=GO:0005524,GO:0007059,GO:0030261;gene=smc;Parent=GCA000560365_01209_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1196,COG:D,KEGG:K03529,RefSeq:WP_000262704.1,SO:0001217,UniParc:UPI00004B5BC1,UniRef:UniRef100_Q2FZ49,UniRef:UniRef50_A0A380G9C6,UniRef:UniRef90_A0A2I7Y681
contig_1	Pyrodigal	gene	1254249	1255499	.	+	.	ID=GCA000560365_01210_gene;locus_tag=GCA000560365_01210;gene=ftsY
contig_1	Pyrodigal	CDS	1254249	1255499	.	+	0	ID=GCA000560365_01210;Name=signal recognition particle-docking protein FtsY;locus_tag=GCA000560365_01210;product=signal recognition particle-docking protein FtsY;Dbxref=GO:0003924,GO:0005047,GO:0006614,GO:0009306;gene=ftsY;Parent=GCA000560365_01210_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0552,COG:U,KEGG:K03110,RefSeq:WP_000007683.1,SO:0001217,UniParc:UPI00000522D7,UniRef:UniRef100_Q2FZ48,UniRef:UniRef50_Q2FZ48,UniRef:UniRef90_Q2FZ48
contig_1	Pyrodigal	gene	1255486	1255818	.	+	.	ID=GCA000560365_01211_gene;locus_tag=GCA000560365_01211;gene=ylxM
contig_1	Pyrodigal	CDS	1255486	1255818	.	+	0	ID=GCA000560365_01211;Name=putative DNA-binding protein;locus_tag=GCA000560365_01211;product=putative DNA-binding protein;gene=ylxM;Parent=GCA000560365_01211_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2739,COG:K,RefSeq:WP_000531320.1,SO:0001217,UniParc:UPI0000054ACF,UniRef:UniRef100_Q2FZ47,UniRef:UniRef50_Q2FZ47,UniRef:UniRef90_Q2FZ47
contig_1	Pyrodigal	gene	1255844	1257211	.	+	.	ID=GCA000560365_01212_gene;locus_tag=GCA000560365_01212;gene=ffh
contig_1	Pyrodigal	CDS	1255844	1257211	.	+	0	ID=GCA000560365_01212;Name=signal recognition particle protein;locus_tag=GCA000560365_01212;product=signal recognition particle protein;Dbxref=GO:0003924,GO:0005048,GO:0005525,GO:0009306,GO:0048501;gene=ffh;Parent=GCA000560365_01212_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0541,COG:U,RefSeq:WP_000863479.1,SO:0001217,UniParc:UPI00000D9DA6,UniRef:UniRef100_Q2FZ46,UniRef:UniRef50_P37105,UniRef:UniRef90_A0A7Z7QZ67
contig_1	Pyrodigal	gene	1257646	1257921	.	+	.	ID=GCA000560365_01213_gene;locus_tag=GCA000560365_01213;gene=rpsP
contig_1	Pyrodigal	CDS	1257646	1257921	.	+	0	ID=GCA000560365_01213;Name=30S ribosomal protein S16;locus_tag=GCA000560365_01213;product=30S ribosomal protein S16;Dbxref=GO:0000314,GO:0003735,GO:0005737,GO:0006412,GO:0015935,GO:0022627;gene=rpsP;Parent=GCA000560365_01213_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0228,COG:J,RefSeq:WP_000268754.1,SO:0001217,UniParc:UPI0000134D53,UniRef:UniRef100_Q2FZ45,UniRef:UniRef50_Q2FZ45,UniRef:UniRef90_Q2FZ45
contig_1	Pyrodigal	gene	1258109	1258612	.	+	.	ID=GCA000560365_01214_gene;locus_tag=GCA000560365_01214;gene=rimM
contig_1	Pyrodigal	CDS	1258109	1258612	.	+	0	ID=GCA000560365_01214;Name=ribosome maturation factor RimM;locus_tag=GCA000560365_01214;product=ribosome maturation factor RimM;Dbxref=GO:0005737,GO:0005840,GO:0006364,GO:0042274,GO:0043022;gene=rimM;Parent=GCA000560365_01214_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0806,COG:J,RefSeq:WP_031808144.1,SO:0001217,UniParc:UPI00044FB4C1,UniRef:UniRef100_UPI00044FB4C1,UniRef:UniRef50_Q2FZ44,UniRef:UniRef90_Q2FZ44
contig_1	Pyrodigal	gene	1258612	1259349	.	+	.	ID=GCA000560365_01215_gene;locus_tag=GCA000560365_01215;gene=trmD
contig_1	Pyrodigal	CDS	1258612	1259349	.	+	0	ID=GCA000560365_01215;Name=tRNA (guanosine(37)-N1)-methyltransferase TrmD;locus_tag=GCA000560365_01215;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;Dbxref=GO:0002939,GO:0005829,GO:0008033,GO:0052906;gene=trmD;Parent=GCA000560365_01215_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0336,COG:J,RefSeq:WP_000687328.1,SO:0001217,UniParc:UPI000013742B,UniRef:UniRef100_Q2FZ43,UniRef:UniRef50_Q6GHJ5,UniRef:UniRef90_Q6GHJ5;ec_number=2.1.1.228
contig_1	Infernal	regulatory_region	1259390	1259432	9e-09	+	.	ID=KMHODOBJJH_190;Name=Ribosomal protein L19 leader;product=Ribosomal protein L19 leader;Dbxref=RFAM:RF00556;inference=profile:Rfam:RF00556;Note=SO:0000140;regulatory_class=attenuator
contig_1	Pyrodigal	gene	1259452	1259802	.	+	.	ID=GCA000560365_01216_gene;locus_tag=GCA000560365_01216;gene=rplS
contig_1	Pyrodigal	CDS	1259452	1259802	.	+	0	ID=GCA000560365_01216;Name=50S ribosomal protein L19;locus_tag=GCA000560365_01216;product=50S ribosomal protein L19;Dbxref=GO:0000311,GO:0003735,GO:0006412,GO:0022625;gene=rplS;Parent=GCA000560365_01216_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0335,COG:J,KEGG:K02884,RefSeq:WP_000181404.1,SO:0001217,UniParc:UPI0000054AE5,UniRef:UniRef100_Q2FZ42,UniRef:UniRef50_Q8EWU9,UniRef:UniRef90_Q2FZ42
contig_1	Pyrodigal	gene	1260046	1262652	.	-	.	ID=GCA000560365_01217_gene;locus_tag=GCA000560365_01217;gene=yfhO
contig_1	Pyrodigal	CDS	1260046	1262652	.	-	0	ID=GCA000560365_01217;Name=lipoteichoic acid-specific glycosyltransferase YfhO;locus_tag=GCA000560365_01217;product=lipoteichoic acid-specific glycosyltransferase YfhO;gene=yfhO;Parent=GCA000560365_01217_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000915229,COG:COG4485,COG:S,KEGG:K25619,RefSeq:WP_000915229.1,SO:0001217,UniParc:UPI00000522D8,UniRef:UniRef100_Q2FZ40,UniRef:UniRef50_Q2FZ40,UniRef:UniRef90_Q2FZ40
contig_1	Pyrodigal	gene	1263053	1263937	.	+	.	ID=GCA000560365_01218_gene;locus_tag=GCA000560365_01218;gene=ylqF
contig_1	Pyrodigal	CDS	1263053	1263937	.	+	0	ID=GCA000560365_01218;Name=ribosome biogenesis GTPase YlqF;locus_tag=GCA000560365_01218;product=ribosome biogenesis GTPase YlqF;Dbxref=GO:0003924,GO:0005525,GO:0005737,GO:0042254;gene=ylqF;Parent=GCA000560365_01218_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1161,COG:J,RefSeq:WP_000236722.1,SO:0001217,UniParc:UPI0000054AE2,UniRef:UniRef100_Q2FZ39,UniRef:UniRef50_A0A3G6UNR5,UniRef:UniRef90_A0A389V7Z2
contig_1	Pyrodigal	gene	1263921	1264688	.	+	.	ID=GCA000560365_01219_gene;locus_tag=GCA000560365_01219;gene=rnhB
contig_1	Pyrodigal	CDS	1263921	1264688	.	+	0	ID=GCA000560365_01219;Name=ribonuclease HII;locus_tag=GCA000560365_01219;product=ribonuclease HII;Dbxref=GO:0003723,GO:0004523,GO:0005737,GO:0006298,GO:0030145,GO:0032299,GO:0043137;gene=rnhB;Parent=GCA000560365_01219_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0164,COG:L,KEGG:K03470,RefSeq:WP_000176394.1,SO:0001217,UniParc:UPI0000054AE1,UniRef:UniRef100_Q2FZ38,UniRef:UniRef50_Q6GHJ1,UniRef:UniRef90_Q6GHJ1;ec_number=3.1.26.4
contig_1	Pyrodigal	gene	1264797	1265963	.	+	.	ID=GCA000560365_01220_gene;locus_tag=GCA000560365_01220;gene=sucC
contig_1	Pyrodigal	CDS	1264797	1265963	.	+	0	ID=GCA000560365_01220;Name=ADP-forming succinate--CoA ligase subunit beta;locus_tag=GCA000560365_01220;product=ADP-forming succinate--CoA ligase subunit beta;Dbxref=GO:0000287,GO:0003824,GO:0004775,GO:0004776,GO:0005524,GO:0005829,GO:0006099,GO:0006104,GO:0042709,GO:0046872;gene=sucC;Parent=GCA000560365_01220_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0045,RefSeq:WP_001020801.1,SO:0001217,UniParc:UPI0000054AE0,UniRef:UniRef100_Q2FZ37,UniRef:UniRef50_Q8UC60,UniRef:UniRef90_Q2FZ37;ec_number=6.2.1.5
contig_1	Pyrodigal	gene	1265985	1266893	.	+	.	ID=GCA000560365_01221_gene;locus_tag=GCA000560365_01221;gene=sucD
contig_1	Pyrodigal	CDS	1265985	1266893	.	+	0	ID=GCA000560365_01221;Name=succinate--CoA ligase subunit alpha;locus_tag=GCA000560365_01221;product=succinate--CoA ligase subunit alpha;Dbxref=GO:0000166,GO:0003824,GO:0004775,GO:0004776,GO:0005829,GO:0006099,GO:0009361;gene=sucD;Parent=GCA000560365_01221_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0074,RefSeq:WP_000110253.1,SO:0001217,UniParc:UPI0000054ADF,UniRef:UniRef100_Q5HGI6,UniRef:UniRef50_P80865,UniRef:UniRef90_Q5HPU4;ec_number=6.2.1.5
contig_1	Pyrodigal	gene	1267120	1268238	.	+	.	ID=GCA000560365_01222_gene;locus_tag=GCA000560365_01222;gene=lytN
contig_1	Pyrodigal	CDS	1267120	1268238	.	+	0	ID=GCA000560365_01222;Name=putative cell wall hydrolase LytN;locus_tag=GCA000560365_01222;product=putative cell wall hydrolase LytN;Dbxref=GO:0005576,GO:0008932,GO:0016787,GO:0071555;gene=lytN;Parent=GCA000560365_01222_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1388,COG:M,RefSeq:WP_001041662.1,SO:0001217,UniParc:UPI0000054ADE,UniRef:UniRef100_Q9ZNI1,UniRef:UniRef50_Q9ZNI1,UniRef:UniRef90_Q9ZNI1;ec_number=3.-.-.-
contig_1	Pyrodigal	gene	1268266	1269510	.	+	.	ID=GCA000560365_01223_gene;locus_tag=GCA000560365_01223;gene=fmhC
contig_1	Pyrodigal	CDS	1268266	1269510	.	+	0	ID=GCA000560365_01223;Name=FemA/FemB family glycyltransferase FmhC;locus_tag=GCA000560365_01223;product=FemA/FemB family glycyltransferase FmhC;gene=fmhC;Parent=GCA000560365_01223_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_100495214,COG:COG2348,COG:M,RefSeq:WP_000672867.1,SO:0001217,UniParc:UPI0000054ADD,UniRef:UniRef100_Q2FZ34,UniRef:UniRef50_B9DMC1,UniRef:UniRef90_A0A380DRS9
contig_1	Pyrodigal	gene	1269683	1270555	.	+	.	ID=GCA000560365_01224_gene;locus_tag=GCA000560365_01224;gene=dprA
contig_1	Pyrodigal	CDS	1269683	1270555	.	+	0	ID=GCA000560365_01224;Name=DNA-processing protein DprA;locus_tag=GCA000560365_01224;product=DNA-processing protein DprA;Dbxref=GO:0009294;gene=dprA;Parent=GCA000560365_01224_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0758,COG:L,RefSeq:WP_000593192.1,SO:0001217,UniParc:UPI00000D9DAB,UniRef:UniRef100_A0A140HKN1,UniRef:UniRef50_A0A140HKN1,UniRef:UniRef90_A0A140HKN1
contig_1	Pyrodigal	gene	1270729	1272804	.	+	.	ID=GCA000560365_01225_gene;locus_tag=GCA000560365_01225;gene=topA
contig_1	Pyrodigal	CDS	1270729	1272804	.	+	0	ID=GCA000560365_01225;Name=type I DNA topoisomerase;locus_tag=GCA000560365_01225;product=type I DNA topoisomerase;Dbxref=GO:0003677,GO:0003917,GO:0005694,GO:0005737,GO:0006260,GO:0006265,GO:0046872;gene=topA;Parent=GCA000560365_01225_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0551,COG:L,KEGG:K03168,RefSeq:WP_001548566.1,SO:0001217,UniParc:UPI0000054ADB,UniRef:UniRef100_A0A0D6HS19,UniRef:UniRef50_Q9CG80,UniRef:UniRef90_Q2FZ32;ec_number=5.6.2.1
contig_1	Pyrodigal	gene	1272960	1274267	.	+	.	ID=GCA000560365_01226_gene;locus_tag=GCA000560365_01226;gene=trmFO
contig_1	Pyrodigal	CDS	1272960	1274267	.	+	0	ID=GCA000560365_01226;Name=methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO;locus_tag=GCA000560365_01226;product=methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO;Dbxref=GO:0002098,GO:0005829,GO:0008033,GO:0030488,GO:0047151,GO:0050660;gene=trmFO;Parent=GCA000560365_01226_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1206,COG:J,KEGG:K04094,RefSeq:WP_000195254.1,SO:0001217,UniParc:UPI0000054AD9,UniRef:UniRef100_Q2FZ31,UniRef:UniRef50_Q2FZ31,UniRef:UniRef90_Q2FZ31;ec_number=2.1.1.74
contig_1	Pyrodigal	gene	1274684	1275580	.	+	.	ID=GCA000560365_01227_gene;locus_tag=GCA000560365_01227;gene=xerC
contig_1	Pyrodigal	CDS	1274684	1275580	.	+	0	ID=GCA000560365_01227;Name=tyrosine recombinase XerC;locus_tag=GCA000560365_01227;product=tyrosine recombinase XerC;Dbxref=GO:0003677,GO:0005737,GO:0006310,GO:0006313,GO:0007059,GO:0009037,GO:0015074,GO:0051301;gene=xerC;Parent=GCA000560365_01227_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4974,COG:L,RefSeq:WP_001015597.1,SO:0001217,UniParc:UPI00004B5BC4,UniRef:UniRef100_Q2FZ30,UniRef:UniRef50_Q2FZ30,UniRef:UniRef90_Q2FZ30
contig_1	Pyrodigal	gene	1275577	1276122	.	+	.	ID=GCA000560365_01228_gene;locus_tag=GCA000560365_01228;gene=hslV
contig_1	Pyrodigal	CDS	1275577	1276122	.	+	0	ID=GCA000560365_01228;Name=ATP-dependent protease subunit HslV;locus_tag=GCA000560365_01228;product=ATP-dependent protease subunit HslV;Dbxref=GO:0004298,GO:0005839,GO:0009376,GO:0046872,GO:0051603;gene=hslV;Parent=GCA000560365_01228_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5405,COG:O,KEGG:K01419,RefSeq:WP_000072681.1,SO:0001217,UniParc:UPI0000054AD7,UniRef:UniRef100_Q2FZ29,UniRef:UniRef50_Q2FZ29,UniRef:UniRef90_Q2FZ29;ec_number=3.4.25.2
contig_1	Pyrodigal	gene	1276188	1277591	.	+	.	ID=GCA000560365_01229_gene;locus_tag=GCA000560365_01229;gene=hslU
contig_1	Pyrodigal	CDS	1276188	1277591	.	+	0	ID=GCA000560365_01229;Name=ATP-dependent protease ATPase subunit HslU;locus_tag=GCA000560365_01229;product=ATP-dependent protease ATPase subunit HslU;Dbxref=GO:0005524,GO:0008233,GO:0009376,GO:0016887,GO:0036402,GO:0043335,GO:0051603;gene=hslU;Parent=GCA000560365_01229_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1220,COG:O,RefSeq:WP_031808145.1,SO:0001217,UniParc:UPI00044730B8,UniRef:UniRef100_UPI00044730B8,UniRef:UniRef50_P63796,UniRef:UniRef90_P63796;ec_number=3.4.25.2
contig_1	Pyrodigal	gene	1277616	1278389	.	+	.	ID=GCA000560365_01230_gene;locus_tag=GCA000560365_01230;gene=codY
contig_1	Pyrodigal	CDS	1277616	1278389	.	+	0	ID=GCA000560365_01230;Name=GTP-sensing pleiotropic transcriptional regulator CodY;locus_tag=GCA000560365_01230;product=GTP-sensing pleiotropic transcriptional regulator CodY;Dbxref=GO:0003677,GO:0003700,GO:0005525,GO:0005737,GO:0045892;gene=codY;Parent=GCA000560365_01230_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4465,COG:K,KEGG:K03706,RefSeq:WP_000055337.1,SO:0001217,UniParc:UPI0000054AD5,UniRef:UniRef100_Q2FZ27,UniRef:UniRef50_P39779,UniRef:UniRef90_Q2FZ27
contig_1	Pyrodigal	gene	1278731	1279498	.	+	.	ID=GCA000560365_01231_gene;locus_tag=GCA000560365_01231;gene=rpsB
contig_1	Pyrodigal	CDS	1278731	1279498	.	+	0	ID=GCA000560365_01231;Name=30S ribosomal protein S2;locus_tag=GCA000560365_01231;product=30S ribosomal protein S2;Dbxref=GO:0003735,GO:0006412,GO:0015935,GO:0022627;gene=rpsB;Parent=GCA000560365_01231_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0052,COG:J,KEGG:K02967,RefSeq:WP_000268484.1,SO:0001217,UniParc:UPI0000134F21,UniRef:UniRef100_Q2FZ25,UniRef:UniRef50_P21464,UniRef:UniRef90_Q2FZ25
contig_1	Pyrodigal	gene	1279680	1280561	.	+	.	ID=GCA000560365_01232_gene;locus_tag=GCA000560365_01232;gene=tsf
contig_1	Pyrodigal	CDS	1279680	1280561	.	+	0	ID=GCA000560365_01232;Name=translation elongation factor Ts;locus_tag=GCA000560365_01232;product=translation elongation factor Ts;Dbxref=GO:0003746,GO:0005737,GO:0006414;gene=tsf;Parent=GCA000560365_01232_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0264,COG:J,RefSeq:WP_000201387.1,SO:0001217,UniParc:UPI0000054ACE,UniRef:UniRef100_Q2FZ23,UniRef:UniRef50_Q2FZ23,UniRef:UniRef90_Q2FZ23
contig_1	Pyrodigal	gene	1280698	1281420	.	+	.	ID=GCA000560365_01233_gene;locus_tag=GCA000560365_01233;gene=pyrH
contig_1	Pyrodigal	CDS	1280698	1281420	.	+	0	ID=GCA000560365_01233;Name=UMP kinase;locus_tag=GCA000560365_01233;product=UMP kinase;Dbxref=GO:0005524,GO:0005737,GO:0006221,GO:0006225,GO:0015949,GO:0033862,GO:0044210;gene=pyrH;Parent=GCA000560365_01233_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0528,COG:F,RefSeq:WP_000057330.1,SO:0001217,UniParc:UPI0000132DC0,UniRef:UniRef100_Q2FZ22,UniRef:UniRef50_O31749,UniRef:UniRef90_Q2FZ22;ec_number=2.7.4.22
contig_1	Pyrodigal	gene	1281439	1281993	.	+	.	ID=GCA000560365_01234_gene;locus_tag=GCA000560365_01234;gene=frr
contig_1	Pyrodigal	CDS	1281439	1281993	.	+	0	ID=GCA000560365_01234;Name=ribosome recycling factor;locus_tag=GCA000560365_01234;product=ribosome recycling factor;Dbxref=GO:0005737,GO:0006412,GO:0006415,GO:0008135,GO:0043023;gene=frr;Parent=GCA000560365_01234_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0233,COG:J,RefSeq:WP_001280006.1,SO:0001217,UniParc:UPI0000054ACC,UniRef:UniRef100_Q2FZ21,UniRef:UniRef50_Q2FZ21,UniRef:UniRef90_Q2FZ21
contig_1	Pyrodigal	gene	1282366	1283136	.	+	.	ID=GCA000560365_01235_gene;locus_tag=GCA000560365_01235;gene=uppS
contig_1	Pyrodigal	CDS	1282366	1283136	.	+	0	ID=GCA000560365_01235;Name=isoprenyl transferase;locus_tag=GCA000560365_01235;product=isoprenyl transferase;Dbxref=GO:0000287,GO:0005829,GO:0008834,GO:0016094,GO:0016765,GO:0030145,GO:0045547;gene=uppS;Parent=GCA000560365_01235_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0020,COG:I,RefSeq:WP_000473705.1,SO:0001217,UniParc:UPI00000D9DAE,UniRef:UniRef100_Q5HGH1,UniRef:UniRef50_Q8DRB3,UniRef:UniRef90_P60476;ec_number=2.5.1.-
contig_1	Pyrodigal	gene	1283143	1283925	.	+	.	ID=GCA000560365_01236_gene;locus_tag=GCA000560365_01236;gene=cdsA
contig_1	Pyrodigal	CDS	1283143	1283925	.	+	0	ID=GCA000560365_01236;Name=Phosphatidate cytidylyltransferase;locus_tag=GCA000560365_01236;product=Phosphatidate cytidylyltransferase;Dbxref=GO:0004605,GO:0005886,GO:0016024;gene=cdsA;Parent=GCA000560365_01236_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0575,COG:I,KEGG:K00981,RefSeq:WP_000868413.1,SO:0001217,UniParc:UPI0000054ACA,UniRef:UniRef100_Q5HGH0,UniRef:UniRef50_Q49X46,UniRef:UniRef90_Q5HGH0;ec_number=2.7.7.41
contig_1	Pyrodigal	gene	1284187	1285473	.	+	.	ID=GCA000560365_01237_gene;locus_tag=GCA000560365_01237;gene=rseP
contig_1	Pyrodigal	CDS	1284187	1285473	.	+	0	ID=GCA000560365_01237;Name=RIP metalloprotease RseP;locus_tag=GCA000560365_01237;product=RIP metalloprotease RseP;Dbxref=GO:0004222,GO:0005886,GO:0006508,GO:0016020,GO:0046872;gene=rseP;Parent=GCA000560365_01237_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0750,COG:OK,RefSeq:WP_000121116.1,SO:0001217,UniParc:UPI00004B5BC6,UniRef:UniRef100_Q5HGG9,UniRef:UniRef50_P63333,UniRef:UniRef90_P63333;ec_number=3.4.24.-
contig_1	Pyrodigal	gene	1285493	1287196	.	+	.	ID=GCA000560365_01238_gene;locus_tag=GCA000560365_01238;gene=proS
contig_1	Pyrodigal	CDS	1285493	1287196	.	+	0	ID=GCA000560365_01238;Name=proline--tRNA ligase;locus_tag=GCA000560365_01238;product=proline--tRNA ligase;Dbxref=GO:0000166,GO:0002161,GO:0004812,GO:0004827,GO:0005524,GO:0005829,GO:0006418,GO:0006433,GO:0016740;gene=proS;Parent=GCA000560365_01238_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0442,COG:J,KEGG:K01881,RefSeq:WP_000814103.1,SO:0001217,UniParc:UPI0000054AC8,UniRef:UniRef100_Q2G1Z4,UniRef:UniRef50_Q2G1Z4,UniRef:UniRef90_Q2G1Z4;ec_number=6.1.1.15
contig_1	Pyrodigal	gene	1287454	1291770	.	+	.	ID=GCA000560365_01239_gene;locus_tag=GCA000560365_01239;gene=polC
contig_1	Pyrodigal	CDS	1287454	1291770	.	+	0	ID=GCA000560365_01239;Name=PolC-type DNA polymerase III;locus_tag=GCA000560365_01239;product=PolC-type DNA polymerase III;Dbxref=GO:0003677,GO:0003887,GO:0005737,GO:0006260,GO:0006261,GO:0008408;gene=polC;Parent=GCA000560365_01239_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2176,COG:L,KEGG:K03763,SO:0001217,UniParc:UPI0000167805,UniRef:UniRef100_Q2G1Z8,UniRef:UniRef50_Q2G1Z8,UniRef:UniRef90_Q2G1Z8;ec_number=2.7.7.7
contig_1	Pyrodigal	gene	1292060	1292527	.	+	.	ID=GCA000560365_01240_gene;locus_tag=GCA000560365_01240;gene=rimP
contig_1	Pyrodigal	CDS	1292060	1292527	.	+	0	ID=GCA000560365_01240;Name=ribosome maturation factor RimP;locus_tag=GCA000560365_01240;product=ribosome maturation factor RimP;Dbxref=GO:0000028,GO:0005829,GO:0006412,GO:0042274;gene=rimP;Parent=GCA000560365_01240_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0779,COG:J,RefSeq:WP_000036631.1,SO:0001217,UniParc:UPI00000D9DB0,UniRef:UniRef100_Q2G2D3,UniRef:UniRef50_P32726,UniRef:UniRef90_Q2G2D3
contig_1	Pyrodigal	gene	1292548	1293723	.	+	.	ID=GCA000560365_01241_gene;locus_tag=GCA000560365_01241;gene=nusA
contig_1	Pyrodigal	CDS	1292548	1293723	.	+	0	ID=GCA000560365_01241;Name=Transcription termination/antitermination protein NusA;locus_tag=GCA000560365_01241;product=Transcription termination/antitermination protein NusA;gene=nusA;Parent=GCA000560365_01241_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0195,COG:K,RefSeq:WP_000097462.1,SO:0001217,UniParc:UPI00004B5BC8,UniRef:UniRef100_Q2G2D2,UniRef:UniRef50_K9AT72,UniRef:UniRef90_Q2G2D2
contig_1	Pyrodigal	gene	1293744	1294028	.	+	.	ID=GCA000560365_01242_gene;locus_tag=GCA000560365_01242;gene=rnpM
contig_1	Pyrodigal	CDS	1293744	1294028	.	+	0	ID=GCA000560365_01242;Name=RNase P modulator RnpM;locus_tag=GCA000560365_01242;product=RNase P modulator RnpM;gene=rnpM;Parent=GCA000560365_01242_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:AJ,COG:COG2740,KEGG:K07742,RefSeq:WP_000727423.1,SO:0001217,UniParc:UPI0000054AC3,UniRef:UniRef100_Q2G2D1,UniRef:UniRef50_A0A920C274,UniRef:UniRef90_Q2G2D1
contig_1	Pyrodigal	gene	1294025	1294342	.	+	.	ID=GCA000560365_01243_gene;locus_tag=GCA000560365_01243;gene=rpl7Ae
contig_1	Pyrodigal	CDS	1294025	1294342	.	+	0	ID=GCA000560365_01243;Name=YlxQ family RNA-binding protein;locus_tag=GCA000560365_01243;product=YlxQ family RNA-binding protein;Dbxref=GO:0003723,GO:0003735;gene=rpl7Ae;Parent=GCA000560365_01243_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1358,COG:J,RefSeq:WP_000020853.1,SO:0001217,UniParc:UPI0000054AC2,UniRef:UniRef100_Q2G2C9,UniRef:UniRef50_Q2G2C9,UniRef:UniRef90_Q2G2C9
contig_1	Pyrodigal	gene	1294347	1296464	.	+	.	ID=GCA000560365_01244_gene;locus_tag=GCA000560365_01244;gene=infB
contig_1	Pyrodigal	CDS	1294347	1296464	.	+	0	ID=GCA000560365_01244;Name=translation initiation factor IF-2;locus_tag=GCA000560365_01244;product=translation initiation factor IF-2;Dbxref=GO:0003743,GO:0003924,GO:0005525,GO:0005737,GO:0005829,GO:0006413;gene=infB;Parent=GCA000560365_01244_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0532,COG:J,RefSeq:WP_000043634.1,SO:0001217,UniParc:UPI00004B5BC9,UniRef:UniRef100_Q2G2D0,UniRef:UniRef50_P17889,UniRef:UniRef90_Q2G2D0
contig_1	Pyrodigal	gene	1296850	1297200	.	+	.	ID=GCA000560365_01245_gene;locus_tag=GCA000560365_01245;gene=rbfA
contig_1	Pyrodigal	CDS	1296850	1297200	.	+	0	ID=GCA000560365_01245;Name=30S ribosome-binding factor RbfA;locus_tag=GCA000560365_01245;product=30S ribosome-binding factor RbfA;Dbxref=GO:0005829,GO:0006364,GO:0030490,GO:0043024;gene=rbfA;Parent=GCA000560365_01245_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0858,COG:J,RefSeq:WP_000097322.1,SO:0001217,UniParc:UPI00001331BF,UniRef:UniRef100_Q2G2Q4,UniRef:UniRef50_Q2G2Q4,UniRef:UniRef90_Q2G2Q4
contig_1	Pyrodigal	gene	1297369	1298286	.	+	.	ID=GCA000560365_01246_gene;locus_tag=GCA000560365_01246;gene=truB
contig_1	Pyrodigal	CDS	1297369	1298286	.	+	0	ID=GCA000560365_01246;Name=tRNA pseudouridine(55) synthase TruB;locus_tag=GCA000560365_01246;product=tRNA pseudouridine(55) synthase TruB;Dbxref=GO:0001522,GO:0003723,GO:0009451,GO:0009982,GO:0031119,GO:0160148,GO:1990481;gene=truB;Parent=GCA000560365_01246_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0130,COG:J,KEGG:K03177,RefSeq:WP_000282305.1,SO:0001217,UniParc:UPI00004B5BCA,UniRef:UniRef100_Q2G2Q3,UniRef:UniRef50_Q2G2Q3,UniRef:UniRef90_Q2G2Q3;ec_number=5.4.99.25
contig_1	Pyrodigal	gene	1298301	1299272	.	+	.	ID=GCA000560365_01247_gene;locus_tag=GCA000560365_01247;gene=ribF
contig_1	Pyrodigal	CDS	1298301	1299272	.	+	0	ID=GCA000560365_01247;Name=riboflavin biosynthesis protein RibF;locus_tag=GCA000560365_01247;product=riboflavin biosynthesis protein RibF;Dbxref=GO:0003919,GO:0005737,GO:0006747,GO:0009398;gene=ribF;Parent=GCA000560365_01247_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0196,COG:H,KEGG:K11753,RefSeq:WP_000864185.1,SO:0001217,UniParc:UPI0000054ABD,UniRef:UniRef100_Q2G2Q2,UniRef:UniRef50_Q2G2Q2,UniRef:UniRef90_Q2G2Q2;ec_number=2.7.7.2
contig_1	Pyrodigal	gene	1299387	1299656	.	+	.	ID=GCA000560365_01248_gene;locus_tag=GCA000560365_01248;gene=rpsO
contig_1	Pyrodigal	CDS	1299387	1299656	.	+	0	ID=GCA000560365_01248;Name=30S ribosomal protein S15;locus_tag=GCA000560365_01248;product=30S ribosomal protein S15;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:0022627;gene=rpsO;Parent=GCA000560365_01248_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0184,COG:J,RefSeq:WP_001018328.1,SO:0001217,UniParc:UPI000004801C,UniRef:UniRef100_Q2G2Q1,UniRef:UniRef50_Q2G2Q1,UniRef:UniRef90_Q2G2Q1
contig_1	Pyrodigal	gene	1300026	1302122	.	+	.	ID=GCA000560365_01249_gene;locus_tag=GCA000560365_01249;gene=pnp
contig_1	Pyrodigal	CDS	1300026	1302122	.	+	0	ID=GCA000560365_01249;Name=polyribonucleotide nucleotidyltransferase;locus_tag=GCA000560365_01249;product=polyribonucleotide nucleotidyltransferase;Dbxref=GO:0000175,GO:0000287,GO:0003723,GO:0004654,GO:0005829,GO:0006396,GO:0006402;gene=pnp;Parent=GCA000560365_01249_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1185,COG:J,KEGG:K00962,RefSeq:WP_000076690.1,SO:0001217,UniParc:UPI0000054ABB,UniRef:UniRef100_Q2FZ20,UniRef:UniRef50_Q2FZ20,UniRef:UniRef90_Q2FZ20;ec_number=2.7.7.8
contig_1	Pyrodigal	gene	1302358	1304031	.	+	.	ID=GCA000560365_01250_gene;locus_tag=GCA000560365_01250;gene=rnj2
contig_1	Pyrodigal	CDS	1302358	1304031	.	+	0	ID=GCA000560365_01250;Name=Ribonuclease J 2;locus_tag=GCA000560365_01250;product=Ribonuclease J 2;Dbxref=GO:0003723,GO:0004521,GO:0004534,GO:0005737,GO:0006364,GO:0008270;gene=rnj2;Parent=GCA000560365_01250_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0595,COG:J,RefSeq:WP_000052590.1,SO:0001217,UniParc:UPI00000D7781,UniRef:UniRef100_Q2FZ19,UniRef:UniRef50_Q2FZ19,UniRef:UniRef90_Q2FZ19;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	1304287	1306656	.	+	.	ID=GCA000560365_01251_gene;locus_tag=GCA000560365_01251;gene=ftsK
contig_1	Pyrodigal	CDS	1304287	1306656	.	+	0	ID=GCA000560365_01251;Name=DNA translocase FtsK;locus_tag=GCA000560365_01251;product=DNA translocase FtsK;Dbxref=GO:0003677,GO:0005524,GO:0005886,GO:0007059,GO:0016887,GO:0051301;gene=ftsK;Parent=GCA000560365_01251_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000035767.1,SO:0001217,UniParc:UPI000062760A,UniRef:UniRef100_Q5HGF5,UniRef:UniRef50_Q5HGF5,UniRef:UniRef90_Q5HGF5
contig_1	Pyrodigal	gene	1306661	1307374	.	+	.	ID=GCA000560365_01252_gene;locus_tag=GCA000560365_01252;gene=mngR
contig_1	Pyrodigal	CDS	1306661	1307374	.	+	0	ID=GCA000560365_01252;Name=HTH gntR-type domain-containing protein;locus_tag=GCA000560365_01252;product=HTH gntR-type domain-containing protein;gene=mngR;Parent=GCA000560365_01252_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2188,COG:K,RefSeq:WP_001293307.1,SO:0001217,UniParc:UPI00003B1602,UniRef:UniRef100_Q2FZ17,UniRef:UniRef50_Q2FZ17,UniRef:UniRef90_Q2FZ17
contig_1	Pyrodigal	gene	1307405	1308670	.	+	.	ID=GCA000560365_01253_gene;locus_tag=GCA000560365_01253;gene=yfmF
contig_1	Pyrodigal	CDS	1307405	1308670	.	+	0	ID=GCA000560365_01253;Name=EF-P 5-aminopentanol modification-associated protein YfmF;locus_tag=GCA000560365_01253;product=EF-P 5-aminopentanol modification-associated protein YfmF;gene=yfmF;Parent=GCA000560365_01253_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0612,COG:R,RefSeq:WP_000089941.1,SO:0001217,UniParc:UPI00000CA9CD,UniRef:UniRef100_Q2FZ16,UniRef:UniRef50_Q2FZ16,UniRef:UniRef90_Q2FZ16
contig_1	Pyrodigal	gene	1308670	1309956	.	+	.	ID=GCA000560365_01254_gene;locus_tag=GCA000560365_01254;gene=yfmH
contig_1	Pyrodigal	CDS	1308670	1309956	.	+	0	ID=GCA000560365_01254;Name=EF-P 5-aminopentanol modification-associated protein YfmH;locus_tag=GCA000560365_01254;product=EF-P 5-aminopentanol modification-associated protein YfmH;gene=yfmH;Parent=GCA000560365_01254_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0612,COG:R,RefSeq:WP_000664764.1,SO:0001217,UniParc:UPI00004B5BCC,UniRef:UniRef100_A0A0E7DX57,UniRef:UniRef50_A0A7U7PY37,UniRef:UniRef90_A0A7U7PY37
contig_1	Pyrodigal	gene	1309956	1310660	.	+	.	ID=GCA000560365_01255_gene;locus_tag=GCA000560365_01255;gene=ymfI
contig_1	Pyrodigal	CDS	1309956	1310660	.	+	0	ID=GCA000560365_01255;Name=elongation factor P 5-aminopentanone reductase;locus_tag=GCA000560365_01255;product=elongation factor P 5-aminopentanone reductase;gene=ymfI;Parent=GCA000560365_01255_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1028,COG:I,RefSeq:WP_000646227.1,SO:0001217,UniParc:UPI0000054AB5,UniRef:UniRef100_Q2FZ14,UniRef:UniRef50_A0A380G8X7,UniRef:UniRef90_A0A389U4Z7
contig_1	Pyrodigal	gene	1310765	1311592	.	+	.	ID=GCA000560365_01256_gene;locus_tag=GCA000560365_01256
contig_1	Pyrodigal	CDS	1310765	1311592	.	+	0	ID=GCA000560365_01256;Name=ACT domain-containing protein;locus_tag=GCA000560365_01256;product=ACT domain-containing protein;Parent=GCA000560365_01256_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000214890.1,SO:0001217,UniParc:UPI00000D77F9,UniRef:UniRef100_Q2FZ13,UniRef:UniRef50_O31769,UniRef:UniRef90_A0A1J3ZWG3
contig_1	Pyrodigal	gene	1311611	1312003	.	+	.	ID=GCA000560365_01257_gene;locus_tag=GCA000560365_01257;gene=rodZ
contig_1	Pyrodigal	CDS	1311611	1312003	.	+	0	ID=GCA000560365_01257;Name=HTH cro/C1-type domain-containing protein;locus_tag=GCA000560365_01257;product=HTH cro/C1-type domain-containing protein;gene=rodZ;Parent=GCA000560365_01257_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1426,COG:D,RefSeq:WP_000859443.1,SO:0001217,UniParc:UPI00000D78AE,UniRef:UniRef100_Q2FZ12,UniRef:UniRef50_Q2FZ12,UniRef:UniRef90_Q2FZ12
contig_1	Pyrodigal	gene	1312037	1312615	.	+	.	ID=GCA000560365_01258_gene;locus_tag=GCA000560365_01258;gene=pgsA
contig_1	Pyrodigal	CDS	1312037	1312615	.	+	0	ID=GCA000560365_01258;Name=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase PgsA;locus_tag=GCA000560365_01258;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase PgsA;Dbxref=GO:0005886,GO:0006655,GO:0008444,GO:0008654,GO:0016020;gene=pgsA;Parent=GCA000560365_01258_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0558,COG:I,KEGG:K00995,RefSeq:WP_001025093.1,SO:0001217,UniParc:UPI0000054AB2,UniRef:UniRef100_Q5HGE8,UniRef:UniRef50_Q5HGE8,UniRef:UniRef90_Q5HGE8;ec_number=2.7.8.5
contig_1	Pyrodigal	gene	1312842	1313993	.	+	.	ID=GCA000560365_01259_gene;locus_tag=GCA000560365_01259;gene=cinA
contig_1	Pyrodigal	CDS	1312842	1313993	.	+	0	ID=GCA000560365_01259;Name=Putative competence-damage inducible protein;locus_tag=GCA000560365_01259;product=Putative competence-damage inducible protein;gene=cinA;Parent=GCA000560365_01259_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1058,COG:L,RefSeq:WP_000020361.1,SO:0001217,UniParc:UPI0000054AB1,UniRef:UniRef100_A0A380EHG8,UniRef:UniRef50_A0A380G809,UniRef:UniRef90_A0A389XUJ1
contig_1	Pyrodigal	gene	1314158	1315201	.	+	.	ID=GCA000560365_01260_gene;locus_tag=GCA000560365_01260;gene=recA
contig_1	Pyrodigal	CDS	1314158	1315201	.	+	0	ID=GCA000560365_01260;Name=recombinase RecA;locus_tag=GCA000560365_01260;product=recombinase RecA;Dbxref=GO:0003677,GO:0003684,GO:0003697,GO:0005524,GO:0005829,GO:0006281,GO:0006310,GO:0008094,GO:0009432,GO:0016887,GO:0140664;gene=recA;Parent=GCA000560365_01260_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0468,COG:L,KEGG:K03553,RefSeq:WP_000368166.1,SO:0001217,UniParc:UPI000013352D,UniRef:UniRef100_Q5HGE6,UniRef:UniRef50_P0A452,UniRef:UniRef90_Q5HPQ6
contig_1	Pyrodigal	gene	1315555	1317114	.	+	.	ID=GCA000560365_01261_gene;locus_tag=GCA000560365_01261;gene=rny
contig_1	Pyrodigal	CDS	1315555	1317114	.	+	0	ID=GCA000560365_01261;Name=ribonuclease Y;locus_tag=GCA000560365_01261;product=ribonuclease Y;Dbxref=GO:0003723,GO:0004521,GO:0005886,GO:0006402,GO:0016020;gene=rny;Parent=GCA000560365_01261_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1418,COG:JR,RefSeq:WP_001050913.1,SO:0001217,UniParc:UPI00000D765A,UniRef:UniRef100_Q2FZ08,UniRef:UniRef50_O31774,UniRef:UniRef90_Q2FZ08;ec_number=3.1.-.-
contig_1	Infernal	gene	1317127	1317217	.	+	.	ID=GCA000560365_01262_gene;locus_tag=GCA000560365_01262;gene=sau-27
contig_1	Infernal	ncRNA	1317127	1317217	1.3e-17	+	.	ID=GCA000560365_01262;Name=Staphylococcus sRNA sau-27;locus_tag=GCA000560365_01262;product=Staphylococcus sRNA sau-27;Dbxref=RFAM:RF02387;Parent=GCA000560365_01262_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02387
contig_1	Pyrodigal	gene	1317411	1317626	.	-	.	ID=GCA000560365_01263_gene;locus_tag=GCA000560365_01263
contig_1	Pyrodigal	CDS	1317411	1317626	.	-	0	ID=GCA000560365_01263;Name=Phage protein;locus_tag=GCA000560365_01263;product=Phage protein;Parent=GCA000560365_01263_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000026308.1,SO:0001217,UniParc:UPI0000054AAD,UniRef:UniRef100_Q2FZ07,UniRef:UniRef50_Q2FZ07,UniRef:UniRef90_Q2FZ07
contig_1	Pyrodigal	gene	1317800	1318597	.	+	.	ID=GCA000560365_01264_gene;locus_tag=GCA000560365_01264;gene=ymdB
contig_1	Pyrodigal	CDS	1317800	1318597	.	+	0	ID=GCA000560365_01264;Name=TIGR00282 family metallophosphoesterase;locus_tag=GCA000560365_01264;product=TIGR00282 family metallophosphoesterase;gene=ymdB;Parent=GCA000560365_01264_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1692,COG:T,RefSeq:WP_001222105.1,SO:0001217,UniParc:UPI0000054AAC,UniRef:UniRef100_Q2FZ06,UniRef:UniRef50_O31775,UniRef:UniRef90_Q2FZ06
contig_1	Pyrodigal	gene	1318737	1320497	.	+	.	ID=GCA000560365_01265_gene;locus_tag=GCA000560365_01265;gene=porG
contig_1	Pyrodigal	CDS	1318737	1320497	.	+	0	ID=GCA000560365_01265;Name=2-oxoacid ferredoxin oxidoreductase subunit alpha;locus_tag=GCA000560365_01265;product=2-oxoacid ferredoxin oxidoreductase subunit alpha;gene=porG;Parent=GCA000560365_01265_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1014,KEGG:K00174,RefSeq:WP_000804328.1,SO:0001217,UniParc:UPI00004B5BCD,UniRef:UniRef100_Q2FZ05,UniRef:UniRef50_A0A840PSQ9,UniRef:UniRef90_A0A380DYA8;ec_number=1.2.7.3
contig_1	Pyrodigal	gene	1320498	1321364	.	+	.	ID=GCA000560365_01266_gene;locus_tag=GCA000560365_01266;gene=porB
contig_1	Pyrodigal	CDS	1320498	1321364	.	+	0	ID=GCA000560365_01266;Name=2-oxoacid ferredoxin oxidoreductase;locus_tag=GCA000560365_01266;product=2-oxoacid ferredoxin oxidoreductase;gene=porB;Parent=GCA000560365_01266_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1013,RefSeq:WP_000190138.1,SO:0001217,UniParc:UPI00000D76D1,UniRef:UniRef100_W8UY88,UniRef:UniRef50_A0A239ZH51,UniRef:UniRef90_W8UY88
contig_1	Pyrodigal	gene	1321458	1321751	.	+	.	ID=GCA000560365_01267_gene;locus_tag=GCA000560365_01267;gene=yqgV
contig_1	Pyrodigal	CDS	1321458	1321751	.	+	0	ID=GCA000560365_01267;Name=Thiamine-binding protein domain-containing protein;locus_tag=GCA000560365_01267;product=Thiamine-binding protein domain-containing protein;gene=yqgV;Parent=GCA000560365_01267_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0011,COG:H,RefSeq:WP_000655666.1,SO:0001217,UniParc:UPI0000054AA9,UniRef:UniRef100_Q2FZ03,UniRef:UniRef50_Q49X83,UniRef:UniRef90_A0A7U7JUD0
contig_1	Pyrodigal	gene	1321885	1323429	.	+	.	ID=GCA000560365_01268_gene;locus_tag=GCA000560365_01268;gene=miaB
contig_1	Pyrodigal	CDS	1321885	1323429	.	+	0	ID=GCA000560365_01268;Name=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;locus_tag=GCA000560365_01268;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;Dbxref=GO:0005829,GO:0006400,GO:0016782,GO:0035597,GO:0035600,GO:0046872,GO:0051539,GO:1904047;gene=miaB;Parent=GCA000560365_01268_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0621,COG:J,KEGG:K06168,RefSeq:WP_001001523.1,SO:0001217,UniParc:UPI00004B5BCE,UniRef:UniRef100_Q2FZ02,UniRef:UniRef50_O31778,UniRef:UniRef90_Q2FZ02;ec_number=2.8.4.3
contig_1	Pyrodigal	gene	1323430	1323795	.	+	.	ID=GCA000560365_01269_gene;locus_tag=GCA000560365_01269;gene=ymcA
contig_1	Pyrodigal	CDS	1323430	1323795	.	+	0	ID=GCA000560365_01269;Name=YlbF family regulator;locus_tag=GCA000560365_01269;product=YlbF family regulator;gene=ymcA;Parent=GCA000560365_01269_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4550,COG:T,RefSeq:WP_000282388.1,SO:0001217,UniParc:UPI0000054AA7,UniRef:UniRef100_Q2FZ01,UniRef:UniRef50_Q49X86,UniRef:UniRef90_Q2FZ01
contig_1	Pyrodigal	gene	1323822	1324313	.	+	.	ID=GCA000560365_01270_gene;locus_tag=GCA000560365_01270;gene=thiW
contig_1	Pyrodigal	CDS	1323822	1324313	.	+	0	ID=GCA000560365_01270;Name=energy coupling factor transporter S component ThiW;locus_tag=GCA000560365_01270;product=energy coupling factor transporter S component ThiW;Dbxref=GO:0005215,GO:0006810,GO:0009228;gene=thiW;Parent=GCA000560365_01270_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4732,COG:H,RefSeq:WP_000842277.1,SO:0001217,UniParc:UPI0000054AA6,UniRef:UniRef100_Q2FZ00,UniRef:UniRef50_Q2FZ00,UniRef:UniRef90_Q2FZ00
contig_1	Pyrodigal	gene	1324616	1327234	.	+	.	ID=GCA000560365_01271_gene;locus_tag=GCA000560365_01271;gene=mutS
contig_1	Pyrodigal	CDS	1324616	1327234	.	+	0	ID=GCA000560365_01271;Name=DNA mismatch repair protein MutS;locus_tag=GCA000560365_01271;product=DNA mismatch repair protein MutS;Dbxref=GO:0003684,GO:0005524,GO:0005829,GO:0006298,GO:0030983,GO:0140664;gene=mutS;Parent=GCA000560365_01271_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0249,COG:L,RefSeq:WP_000073352.1,SO:0001217,UniParc:UPI00000D78A3,UniRef:UniRef100_Q5HGD6,UniRef:UniRef50_Q2FYZ9,UniRef:UniRef90_Q2FYZ9
contig_1	Pyrodigal	gene	1327247	1329256	.	+	.	ID=GCA000560365_01272_gene;locus_tag=GCA000560365_01272;gene=mutL
contig_1	Pyrodigal	CDS	1327247	1329256	.	+	0	ID=GCA000560365_01272;Name=DNA mismatch repair endonuclease MutL;locus_tag=GCA000560365_01272;product=DNA mismatch repair endonuclease MutL;Dbxref=GO:0005524,GO:0006298,GO:0016887,GO:0030983,GO:0032300,GO:0140664;gene=mutL;Parent=GCA000560365_01272_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0323,COG:L,RefSeq:WP_000516261.1,SO:0001217,UniParc:UPI0000054AA3,UniRef:UniRef100_Q93T05,UniRef:UniRef50_Q93T05,UniRef:UniRef90_Q93T05
contig_1	Pyrodigal	gene	1329271	1329804	.	+	.	ID=GCA000560365_01273_gene;locus_tag=GCA000560365_01273;gene=glpP
contig_1	Pyrodigal	CDS	1329271	1329804	.	+	0	ID=GCA000560365_01273;Name=Glycerol uptake operon antiterminator regulatory protein;locus_tag=GCA000560365_01273;product=Glycerol uptake operon antiterminator regulatory protein;gene=glpP;Parent=GCA000560365_01273_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1954,COG:K,KEGG:K02443,RefSeq:WP_001063535.1,SO:0001217,UniParc:UPI00000D7824,UniRef:UniRef100_A0A7Z7W1G4,UniRef:UniRef50_Q2FYZ7,UniRef:UniRef90_Q2FYZ7
contig_1	Pyrodigal	gene	1330269	1331087	.	+	.	ID=GCA000560365_01274_gene;locus_tag=GCA000560365_01274;gene=glpF
contig_1	Pyrodigal	CDS	1330269	1331087	.	+	0	ID=GCA000560365_01274;Name=Aquaporin family protein;locus_tag=GCA000560365_01274;product=Aquaporin family protein;gene=glpF;Parent=GCA000560365_01274_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0580,COG:G,RefSeq:WP_001103743.1,SO:0001217,UniParc:UPI0000054667,UniRef:UniRef100_Q2FYZ6,UniRef:UniRef50_P18156,UniRef:UniRef90_Q2FYZ6
contig_1	Pyrodigal	gene	1331216	1332712	.	+	.	ID=GCA000560365_01275_gene;locus_tag=GCA000560365_01275;gene=glpK
contig_1	Pyrodigal	CDS	1331216	1332712	.	+	0	ID=GCA000560365_01275;Name=glycerol kinase GlpK;locus_tag=GCA000560365_01275;product=glycerol kinase GlpK;Dbxref=GO:0004370,GO:0005524,GO:0005829,GO:0006071,GO:0006072,GO:0019563;gene=glpK;Parent=GCA000560365_01275_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0554,RefSeq:WP_000417369.1,SO:0001217,UniParc:UPI00004B5BD0,UniRef:UniRef100_Q2FYZ5,UniRef:UniRef50_O34153,UniRef:UniRef90_Q2FYZ5;ec_number=2.7.1.30
contig_1	Pyrodigal	gene	1332870	1334543	.	+	.	ID=GCA000560365_01276_gene;locus_tag=GCA000560365_01276;gene=glpD
contig_1	Pyrodigal	CDS	1332870	1334543	.	+	0	ID=GCA000560365_01276;Name=Aerobic glycerol-3-phosphate dehydrogenase;locus_tag=GCA000560365_01276;product=Aerobic glycerol-3-phosphate dehydrogenase;Dbxref=GO:0004368,GO:0005737,GO:0019563,GO:0046168;gene=glpD;Parent=GCA000560365_01276_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0578,KEGG:K00111,RefSeq:WP_001218596.1,SO:0001217,UniParc:UPI00004B5BD1,UniRef:UniRef100_Q2FYZ4,UniRef:UniRef50_Q6GHD4,UniRef:UniRef90_Q6GHD4;ec_number=1.1.5.3
contig_1	Pyrodigal	gene	1334690	1335607	.	+	.	ID=GCA000560365_01277_gene;locus_tag=GCA000560365_01277;gene=pldB
contig_1	Pyrodigal	CDS	1334690	1335607	.	+	0	ID=GCA000560365_01277;Name=Hydrolase%2C alpha/beta fold family domain protein;locus_tag=GCA000560365_01277;product=Hydrolase%2C alpha/beta fold family domain protein;gene=pldB;Parent=GCA000560365_01277_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2267,COG:I,SO:0001217,UniParc:UPI000005464A,UniRef:UniRef100_Q2FYZ3,UniRef:UniRef50_Q2FYZ3,UniRef:UniRef90_Q2FYZ3
contig_1	Pyrodigal	gene	1335625	1336560	.	+	.	ID=GCA000560365_01278_gene;locus_tag=GCA000560365_01278;gene=miaA
contig_1	Pyrodigal	CDS	1335625	1336560	.	+	0	ID=GCA000560365_01278;Name=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;locus_tag=GCA000560365_01278;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;Dbxref=GO:0005524,GO:0005737,GO:0006400,GO:0052381;gene=miaA;Parent=GCA000560365_01278_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0324,COG:J,RefSeq:WP_001548613.1,SO:0001217,UniParc:UPI000012F0D2,UniRef:UniRef100_Q2FYZ2,UniRef:UniRef50_Q5HPN8,UniRef:UniRef90_Q2YXR3;ec_number=2.5.1.75
contig_1	Pyrodigal	gene	1336575	1336808	.	+	.	ID=GCA000560365_01279_gene;locus_tag=GCA000560365_01279;gene=hfq
contig_1	Pyrodigal	CDS	1336575	1336808	.	+	0	ID=GCA000560365_01279;Name=RNA chaperone Hfq;locus_tag=GCA000560365_01279;product=RNA chaperone Hfq;Dbxref=GO:0003723,GO:0016070;gene=hfq;Parent=GCA000560365_01279_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1923,COG:T,RefSeq:WP_000561358.1,SO:0001217,UniParc:UPI000005462B,UniRef:UniRef100_Q2FYZ1,UniRef:UniRef50_A0A640MVL3,UniRef:UniRef90_A0A7Z7QYH9
contig_1	Pyrodigal	gene	1337030	1337506	.	-	.	ID=GCA000560365_01280_gene;locus_tag=GCA000560365_01280;gene=bsaA
contig_1	Pyrodigal	CDS	1337030	1337506	.	-	0	ID=GCA000560365_01280;Name=Glutathione peroxidase-like protein BsaA;locus_tag=GCA000560365_01280;product=Glutathione peroxidase-like protein BsaA;Dbxref=GO:0004601,GO:0034599;gene=bsaA;Parent=GCA000560365_01280_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0386,COG:VI,KEGG:K00432,RefSeq:WP_000448078.1,SO:0001217,UniParc:UPI0000054618,UniRef:UniRef100_Q5HGC7,UniRef:UniRef50_Q8CSR9,UniRef:UniRef90_Q5HGC7;ec_number=1.11.1.9
contig_1	Pyrodigal	gene	1337618	1338856	.	+	.	ID=GCA000560365_01281_gene;locus_tag=GCA000560365_01281;gene=hflX
contig_1	Pyrodigal	CDS	1337618	1338856	.	+	0	ID=GCA000560365_01281;Name=GTPase HflX;locus_tag=GCA000560365_01281;product=GTPase HflX;Dbxref=GO:0005525;gene=hflX;Parent=GCA000560365_01281_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2262,COG:J,RefSeq:WP_000068617.1,SO:0001217,UniParc:UPI00000CADD7,UniRef:UniRef100_Q2FYY9,UniRef:UniRef50_B9DPA4,UniRef:UniRef90_Q2FYY9
contig_1	Pyrodigal	gene	1338875	1340113	.	+	.	ID=GCA000560365_01282_gene;locus_tag=GCA000560365_01282;gene=ynbB
contig_1	Pyrodigal	CDS	1338875	1340113	.	+	0	ID=GCA000560365_01282;Name=Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;locus_tag=GCA000560365_01282;product=Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;gene=ynbB;Parent=GCA000560365_01282_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4100,COG:PR,RefSeq:WP_000652047.1,SO:0001217,UniParc:UPI000005460C,UniRef:UniRef100_Q2FYY8,UniRef:UniRef50_A0A202F6W0,UniRef:UniRef90_Q2FYY8
contig_1	Pyrodigal	gene	1340356	1340724	.	+	.	ID=GCA000560365_01283_gene;locus_tag=GCA000560365_01283;gene=soxR
contig_1	Pyrodigal	CDS	1340356	1340724	.	+	0	ID=GCA000560365_01283;Name=HTH merR-type domain-containing protein;locus_tag=GCA000560365_01283;product=HTH merR-type domain-containing protein;gene=soxR;Parent=GCA000560365_01283_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0789,COG:K,RefSeq:WP_000624945.1,SO:0001217,UniParc:UPI0000054602,UniRef:UniRef100_Q2FYY7,UniRef:UniRef50_Q2FYY7,UniRef:UniRef90_Q2FYY7
contig_1	Pyrodigal	gene	1340743	1342083	.	+	.	ID=GCA000560365_01284_gene;locus_tag=GCA000560365_01284;gene=glnA
contig_1	Pyrodigal	CDS	1340743	1342083	.	+	0	ID=GCA000560365_01284;Name=type I glutamate--ammonia ligase;locus_tag=GCA000560365_01284;product=type I glutamate--ammonia ligase;Dbxref=GO:0004356,GO:0005524,GO:0005737,GO:0006542,GO:0046872;gene=glnA;Parent=GCA000560365_01284_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0174,COG:E,KEGG:K01915,RefSeq:WP_001126603.1,SO:0001217,UniParc:UPI000012B701,UniRef:UniRef100_Q5HGC3,UniRef:UniRef50_P12425,UniRef:UniRef90_Q5HGC3;ec_number=6.3.1.2
contig_1	Pyrodigal	gene	1343358	1343447	.	+	.	ID=GCA000560365_01285_gene;locus_tag=GCA000560365_01285;pseudogene=unitary
contig_1	Pyrodigal	CDS	1343358	1343447	.	+	0	ID=GCA000560365_01285;Name=hypothetical protein;locus_tag=GCA000560365_01285;product=hypothetical protein;pseudogene=unitary;Parent=GCA000560365_01285_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0002AFC80E,UniRef:UniRef100_A0A7Z7W1U2,UniRef:UniRef50_A0A2X2KYI6,UniRef:UniRef50_A0A7Z7W1U2,UniRef:UniRef90_A0A2X2KYI6,UniRef:UniRef90_A0A7Z7W1U2
contig_1	Pyrodigal	gene	1343474	1343686	.	+	.	ID=GCA000560365_01286_gene;locus_tag=GCA000560365_01286
contig_1	Pyrodigal	CDS	1343474	1343686	.	+	0	ID=GCA000560365_01286;Name=XRE family transcriptional regulator;locus_tag=GCA000560365_01286;product=XRE family transcriptional regulator;Parent=GCA000560365_01286_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001071308.1,SO:0001217,UniParc:UPI0000696C20,UniRef:UniRef100_Q2FYY4,UniRef:UniRef50_A0A3E0IKC6,UniRef:UniRef90_Q2FYY4
contig_1	Pyrodigal	gene	1343980	1344186	.	+	.	ID=GCA000560365_01287_gene;locus_tag=GCA000560365_01287
contig_1	Pyrodigal	CDS	1343980	1344186	.	+	0	ID=GCA000560365_01287;Name=DNA-binding protein;locus_tag=GCA000560365_01287;product=DNA-binding protein;Parent=GCA000560365_01287_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001002340.1,SO:0001217,UniParc:UPI00000545CD,UniRef:UniRef100_Q2FYY3,UniRef:UniRef50_Q2FYY3,UniRef:UniRef90_Q2FYY3
contig_1	Pyrodigal	gene	1345425	1345610	.	+	.	ID=GCA000560365_01288_gene;locus_tag=GCA000560365_01288
contig_1	Pyrodigal	CDS	1345425	1345610	.	+	0	ID=GCA000560365_01288;Name=DNA-binding protein;locus_tag=GCA000560365_01288;product=DNA-binding protein;Parent=GCA000560365_01288_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000006110.1,SO:0001217,UniParc:UPI00000CAA56,UniRef:UniRef100_Q2FYY1,UniRef:UniRef50_Q2FYY1,UniRef:UniRef90_Q2FYY1
contig_1	Pyrodigal	gene	1346122	1346226	.	+	.	ID=GCA000560365_01289_gene;locus_tag=GCA000560365_01289
contig_1	Pyrodigal	CDS	1346122	1346226	.	+	0	ID=GCA000560365_01289;Name=hypothetical protein;locus_tag=GCA000560365_01289;product=hypothetical protein;Parent=GCA000560365_01289_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000477492.1,SO:0001217,UniParc:UPI00000545AC,UniRef:UniRef100_Q2FYY0,UniRef:UniRef50_Q2FYY0,UniRef:UniRef90_Q2FYY0
contig_1	Pyrodigal	gene	1346355	1346606	.	+	.	ID=GCA000560365_01290_gene;locus_tag=GCA000560365_01290
contig_1	Pyrodigal	CDS	1346355	1346606	.	+	0	ID=GCA000560365_01290;Name=Phage protein;locus_tag=GCA000560365_01290;product=Phage protein;Parent=GCA000560365_01290_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000956747.1,SO:0001217,UniParc:UPI0000054598,UniRef:UniRef100_Q2FYX8,UniRef:UniRef50_Q2FYX8,UniRef:UniRef90_Q2FYX8
contig_1	Pyrodigal	gene	1346652	1347236	.	+	.	ID=GCA000560365_01291_gene;locus_tag=GCA000560365_01291
contig_1	Pyrodigal	CDS	1346652	1347236	.	+	0	ID=GCA000560365_01291;Name=Phage head morphogenesis domain-containing protein;locus_tag=GCA000560365_01291;product=Phage head morphogenesis domain-containing protein;Parent=GCA000560365_01291_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000899337.1,SO:0001217,UniParc:UPI000005458E,UniRef:UniRef100_Q2FYX7,UniRef:UniRef50_Q2FYX7,UniRef:UniRef90_Q2FYX7
contig_1	Pyrodigal	gene	1347357	1347605	.	+	.	ID=GCA000560365_01292_gene;locus_tag=GCA000560365_01292
contig_1	Pyrodigal	CDS	1347357	1347605	.	+	0	ID=GCA000560365_01292;Name=hypothetical protein;locus_tag=GCA000560365_01292;product=hypothetical protein;Parent=GCA000560365_01292_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000906224.1,SO:0001217,UniParc:UPI00003B1633,UniRef:UniRef100_Q2FYX6,UniRef:UniRef50_Q2FYX6,UniRef:UniRef90_Q2FYX6
contig_1	Pyrodigal	gene	1347735	1347836	.	+	.	ID=GCA000560365_01293_gene;locus_tag=GCA000560365_01293
contig_1	Pyrodigal	CDS	1347735	1347836	.	+	0	ID=GCA000560365_01293;Name=hypothetical protein;locus_tag=GCA000560365_01293;product=hypothetical protein;Parent=GCA000560365_01293_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000429647.1,SO:0001217,UniParc:UPI000005456D,UniRef:UniRef100_Q2FYX4,UniRef:UniRef50_Q2FYX4,UniRef:UniRef90_Q2FYX4
contig_1	Pyrodigal	gene	1347882	1348148	.	+	.	ID=GCA000560365_01294_gene;locus_tag=GCA000560365_01294
contig_1	Pyrodigal	CDS	1347882	1348148	.	+	0	ID=GCA000560365_01294;Name=Phage protein;locus_tag=GCA000560365_01294;product=Phage protein;Parent=GCA000560365_01294_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000903039.1,SO:0001217,UniParc:UPI0000054564,UniRef:UniRef100_Q2FYX3,UniRef:UniRef50_A0A7U7JUC4,UniRef:UniRef90_Q2FYX3
contig_1	Pyrodigal	gene	1348157	1348282	.	+	.	ID=GCA000560365_01295_gene;locus_tag=GCA000560365_01295
contig_1	Pyrodigal	CDS	1348157	1348282	.	+	0	ID=GCA000560365_01295;Name=Phage protein;locus_tag=GCA000560365_01295;product=Phage protein;Parent=GCA000560365_01295_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000887403.1,SO:0001217,UniParc:UPI000197A90A,UniRef:UniRef100_Q2FYX2,UniRef:UniRef50_A0A7U7JUI8,UniRef:UniRef90_A0A7U7JUI8
contig_1	Pyrodigal	gene	1348711	1349001	.	+	.	ID=GCA000560365_01296_gene;locus_tag=GCA000560365_01296
contig_1	Pyrodigal	CDS	1348711	1349001	.	+	0	ID=GCA000560365_01296;Name=Bacterial toxin 50 domain-containing protein;locus_tag=GCA000560365_01296;product=Bacterial toxin 50 domain-containing protein;Parent=GCA000560365_01296_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000900530.1,SO:0001217,UniParc:UPI0000054546,UniRef:UniRef100_Q2FYX0,UniRef:UniRef50_Q2FYX0,UniRef:UniRef90_Q2FYX0
contig_1	Pyrodigal	gene	1349012	1349206	.	+	.	ID=GCA000560365_01297_gene;locus_tag=GCA000560365_01297
contig_1	Pyrodigal	CDS	1349012	1349206	.	+	0	ID=GCA000560365_01297;Name=LSM domain protein;locus_tag=GCA000560365_01297;product=LSM domain protein;Parent=GCA000560365_01297_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001217295.1,SO:0001217,UniParc:UPI00003B1630,UniRef:UniRef100_Q2FYW9,UniRef:UniRef50_Q2FYW9,UniRef:UniRef90_Q2FYW9
contig_1	Pyrodigal	gene	1349247	1349597	.	+	.	ID=GCA000560365_01298_gene;locus_tag=GCA000560365_01298
contig_1	Pyrodigal	CDS	1349247	1349597	.	+	0	ID=GCA000560365_01298;Name=Bacterial toxin 50 domain-containing protein;locus_tag=GCA000560365_01298;product=Bacterial toxin 50 domain-containing protein;Parent=GCA000560365_01298_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000891995.1,SO:0001217,UniParc:UPI0000054533,UniRef:UniRef100_Q2FYW8,UniRef:UniRef50_Q2FYW8,UniRef:UniRef90_Q2FYW8
contig_1	Pyrodigal	gene	1349604	1349795	.	+	.	ID=GCA000560365_01299_gene;locus_tag=GCA000560365_01299
contig_1	Pyrodigal	CDS	1349604	1349795	.	+	0	ID=GCA000560365_01299;Name=LSM domain protein;locus_tag=GCA000560365_01299;product=LSM domain protein;Parent=GCA000560365_01299_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001053371.1,SO:0001217,UniParc:UPI0000054528,UniRef:UniRef100_Q2FYW7,UniRef:UniRef50_Q2FYW7,UniRef:UniRef90_Q2FYW7
contig_1	Pyrodigal	gene	1350344	1351369	.	-	.	ID=GCA000560365_01300_gene;locus_tag=GCA000560365_01300;gene=gLY1
contig_1	Pyrodigal	CDS	1350344	1351369	.	-	0	ID=GCA000560365_01300;Name=Aromatic amino acid beta-eliminating lyase/threonine aldolase domain-containing protein;locus_tag=GCA000560365_01300;product=Aromatic amino acid beta-eliminating lyase/threonine aldolase domain-containing protein;gene=gLY1;Parent=GCA000560365_01300_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2008,COG:E,RefSeq:WP_000622700.1,SO:0001217,UniParc:UPI00000CACE3,UniRef:UniRef100_Q2FYW6,UniRef:UniRef50_Q2FYW6,UniRef:UniRef90_Q2FYW6
contig_1	Pyrodigal	gene	1351639	1351836	.	+	.	ID=GCA000560365_01301_gene;locus_tag=GCA000560365_01301
contig_1	Pyrodigal	CDS	1351639	1351836	.	+	0	ID=GCA000560365_01301;Name=Phage protein;locus_tag=GCA000560365_01301;product=Phage protein;Parent=GCA000560365_01301_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000435068.1,SO:0001217,UniParc:UPI0000054508,UniRef:UniRef100_W8U6A7,UniRef:UniRef50_G5JMD9,UniRef:UniRef90_A0A6A9GYQ0
contig_1	Pyrodigal	gene	1351894	1353375	.	+	.	ID=GCA000560365_01302_gene;locus_tag=GCA000560365_01302;gene=cls
contig_1	Pyrodigal	CDS	1351894	1353375	.	+	0	ID=GCA000560365_01302;Name=cardiolipin synthase;locus_tag=GCA000560365_01302;product=cardiolipin synthase;Dbxref=GO:0005886,GO:0008808,GO:0016780,GO:0032049;gene=cls;Parent=GCA000560365_01302_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1502,COG:I,RefSeq:WP_001212860.1,SO:0001217,UniParc:UPI000004740B,UniRef:UniRef100_Q5HGA3,UniRef:UniRef50_Q8CPD8,UniRef:UniRef90_Q5HGA3;ec_number=2.7.8.-
contig_1	Pyrodigal	gene	1353559	1354458	.	+	.	ID=GCA000560365_01303_gene;locus_tag=GCA000560365_01303;gene=rbbA
contig_1	Pyrodigal	CDS	1353559	1354458	.	+	0	ID=GCA000560365_01303;Name=ABC transporter ATP-binding protein;locus_tag=GCA000560365_01303;product=ABC transporter ATP-binding protein;gene=rbbA;Parent=GCA000560365_01303_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1131,COG:JV,RefSeq:WP_000614807.1,SO:0001217,UniParc:UPI00000D76F4,UniRef:UniRef100_A0A0D6HPC7,UniRef:UniRef50_A0A0D6HPC7,UniRef:UniRef90_A0A0D6HPC7
contig_1	Pyrodigal	gene	1354427	1355158	.	+	.	ID=GCA000560365_01304_gene;locus_tag=GCA000560365_01304;gene=yadH
contig_1	Pyrodigal	CDS	1354427	1355158	.	+	0	ID=GCA000560365_01304;Name=ABC transmembrane type-2 domain-containing protein;locus_tag=GCA000560365_01304;product=ABC transmembrane type-2 domain-containing protein;gene=yadH;Parent=GCA000560365_01304_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0842,COG:V,RefSeq:WP_000603968.1,SO:0001217,UniParc:UPI00004B5BD6,UniRef:UniRef100_Q2FYW2,UniRef:UniRef50_Q2FYW2,UniRef:UniRef90_Q2FYW2
contig_1	Pyrodigal	gene	1355162	1356253	.	+	.	ID=GCA000560365_01305_gene;locus_tag=GCA000560365_01305;gene=comP
contig_1	Pyrodigal	CDS	1355162	1356253	.	+	0	ID=GCA000560365_01305;Name=histidine kinase;locus_tag=GCA000560365_01305;product=histidine kinase;gene=comP;Parent=GCA000560365_01305_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4585,COG:T,KEGG:K07778,RefSeq:WP_000670313.1,SO:0001217,UniParc:UPI0000696C21,UniRef:UniRef100_A0A1S5ZKP8,UniRef:UniRef50_A0A4U9TN42,UniRef:UniRef90_A0A391F3W4;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	1356250	1356852	.	+	.	ID=GCA000560365_01306_gene;locus_tag=GCA000560365_01306;gene=citB
contig_1	Pyrodigal	CDS	1356250	1356852	.	+	0	ID=GCA000560365_01306;Name=Response regulator transcription factor;locus_tag=GCA000560365_01306;product=Response regulator transcription factor;gene=citB;Parent=GCA000560365_01306_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2197,COG:TK,RefSeq:WP_000202389.1,SO:0001217,UniParc:UPI0000696C22,UniRef:UniRef100_A0A1S6DEB4,UniRef:UniRef50_Q2FYW0,UniRef:UniRef90_Q2FYW0
contig_1	Pyrodigal	gene	1356965	1357153	.	-	.	ID=GCA000560365_01307_gene;locus_tag=GCA000560365_01307;gene=lapA
contig_1	Pyrodigal	CDS	1356965	1357153	.	-	0	ID=GCA000560365_01307;Name=LapA family protein;locus_tag=GCA000560365_01307;product=LapA family protein;gene=lapA;Parent=GCA000560365_01307_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001027143.1,SO:0001217,UniParc:UPI00000544C0,UniRef:UniRef100_Q2FYV9,UniRef:UniRef50_Q2FYV9,UniRef:UniRef90_Q2FYV9
contig_1	Pyrodigal	gene	1357292	1357825	.	+	.	ID=GCA000560365_01308_gene;locus_tag=GCA000560365_01308;gene=nucI
contig_1	Pyrodigal	CDS	1357292	1357825	.	+	0	ID=GCA000560365_01308;Name=thermonuclease NucI;locus_tag=GCA000560365_01308;product=thermonuclease NucI;Dbxref=GO:0003676,GO:0016894;gene=nucI;Parent=GCA000560365_01308_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1525,COG:L,RefSeq:WP_000841351.1,SO:0001217,UniParc:UPI00000D77A5,UniRef:UniRef100_Q2FYV8,UniRef:UniRef50_P43270,UniRef:UniRef90_A0A7U7PYI0;ec_number=3.1.31.1
contig_1	Pyrodigal	gene	1357968	1358822	.	-	.	ID=GCA000560365_01309_gene;locus_tag=GCA000560365_01309
contig_1	Pyrodigal	CDS	1357968	1358822	.	-	0	ID=GCA000560365_01309;Name=NERD domain-containing protein;locus_tag=GCA000560365_01309;product=NERD domain-containing protein;Parent=GCA000560365_01309_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000011823.1,SO:0001217,UniParc:UPI00000D9DCA,UniRef:UniRef100_Q2FYV7,UniRef:UniRef50_G5JGH5,UniRef:UniRef90_A0A0E1XGC0
contig_1	Pyrodigal	gene	1359144	1359728	.	+	.	ID=GCA000560365_01310_gene;locus_tag=GCA000560365_01310
contig_1	Pyrodigal	CDS	1359144	1359728	.	+	0	ID=GCA000560365_01310;Name=Phage protein;locus_tag=GCA000560365_01310;product=Phage protein;Parent=GCA000560365_01310_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00006E8E86,UniRef:UniRef100_W8TTQ9,UniRef:UniRef50_A0A1S1GQT7,UniRef:UniRef90_A0A7Z7W2Q0
contig_1	Pyrodigal	gene	1359782	1361164	.	-	.	ID=GCA000560365_01311_gene;locus_tag=GCA000560365_01311;gene=metL1
contig_1	Pyrodigal	CDS	1359782	1361164	.	-	0	ID=GCA000560365_01311;Name=aspartate kinase;locus_tag=GCA000560365_01311;product=aspartate kinase;Dbxref=GO:0004072,GO:0009089;gene=metL1;Parent=GCA000560365_01311_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0527,COG:E,RefSeq:WP_000868645.1,SO:0001217,UniParc:UPI00000D7823,UniRef:UniRef100_Q2FYV5,UniRef:UniRef50_A0A6V7RA03,UniRef:UniRef90_A0A077UJG8;ec_number=2.7.2.4
contig_1	Pyrodigal	gene	1361355	1362635	.	+	.	ID=GCA000560365_01312_gene;locus_tag=GCA000560365_01312;gene=thrA
contig_1	Pyrodigal	CDS	1361355	1362635	.	+	0	ID=GCA000560365_01312;Name=Homoserine dehydrogenase;locus_tag=GCA000560365_01312;product=Homoserine dehydrogenase;gene=thrA;Parent=GCA000560365_01312_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0460,COG:E,RefSeq:WP_000735864.1,SO:0001217,UniParc:UPI00000CA98E,UniRef:UniRef100_Q2FYV4,UniRef:UniRef50_B9DP89,UniRef:UniRef90_A0A2K4AHW8
contig_1	Pyrodigal	gene	1362641	1363702	.	+	.	ID=GCA000560365_01313_gene;locus_tag=GCA000560365_01313;gene=thrC
contig_1	Pyrodigal	CDS	1362641	1363702	.	+	0	ID=GCA000560365_01313;Name=threonine synthase;locus_tag=GCA000560365_01313;product=threonine synthase;Dbxref=GO:0004795,GO:0009088;gene=thrC;Parent=GCA000560365_01313_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01733,RefSeq:WP_001255460.1,SO:0001217,UniParc:UPI000005448B,UniRef:UniRef100_Q2FYV3,UniRef:UniRef50_Q9K7E3,UniRef:UniRef90_Q2FYV3;ec_number=4.2.3.1
contig_1	Pyrodigal	gene	1363704	1364618	.	+	.	ID=GCA000560365_01314_gene;locus_tag=GCA000560365_01314;gene=thrB
contig_1	Pyrodigal	CDS	1363704	1364618	.	+	0	ID=GCA000560365_01314;Name=homoserine kinase;locus_tag=GCA000560365_01314;product=homoserine kinase;Dbxref=GO:0004413,GO:0005524,GO:0005737,GO:0009088;gene=thrB;Parent=GCA000560365_01314_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0083,COG:E,RefSeq:WP_000073184.1,SO:0001217,UniParc:UPI0000054481,UniRef:UniRef100_Q2FYV2,UniRef:UniRef50_Q2FYV2,UniRef:UniRef90_Q2FYV2;ec_number=2.7.1.39
contig_1	Pyrodigal	gene	1364676	1365479	.	+	.	ID=GCA000560365_01315_gene;locus_tag=GCA000560365_01315;gene=cof
contig_1	Pyrodigal	CDS	1364676	1365479	.	+	0	ID=GCA000560365_01315;Name=Cof-type HAD-IIB family hydrolase;locus_tag=GCA000560365_01315;product=Cof-type HAD-IIB family hydrolase;gene=cof;Parent=GCA000560365_01315_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0561,COG:HR,KEGG:K21064,RefSeq:WP_000186313.1,SO:0001217,UniParc:UPI0000054476,UniRef:UniRef100_Q2FYV1,UniRef:UniRef50_Q2FYV1,UniRef:UniRef90_Q2FYV1;ec_number=3.1.3.104
contig_1	Pyrodigal	gene	1365772	1366086	.	-	.	ID=GCA000560365_01316_gene;locus_tag=GCA000560365_01316
contig_1	Pyrodigal	CDS	1365772	1366086	.	-	0	ID=GCA000560365_01316;Name=Phage protein;locus_tag=GCA000560365_01316;product=Phage protein;Parent=GCA000560365_01316_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000580198.1,SO:0001217,UniParc:UPI0000054461,UniRef:UniRef100_Q2FYV0,UniRef:UniRef50_B9DP93,UniRef:UniRef90_Q2FYV0
contig_1	Pyrodigal	gene	1366304	1367758	.	-	.	ID=GCA000560365_01317_gene;locus_tag=GCA000560365_01317;gene=lysP
contig_1	Pyrodigal	CDS	1366304	1367758	.	-	0	ID=GCA000560365_01317;Name=Amino acid permease/ SLC12A domain-containing protein;locus_tag=GCA000560365_01317;product=Amino acid permease/ SLC12A domain-containing protein;gene=lysP;Parent=GCA000560365_01317_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0833,COG:E,RefSeq:WP_000389956.1,SO:0001217,UniParc:UPI00000D7677,UniRef:UniRef100_Q2FYU8,UniRef:UniRef50_Q2FYU8,UniRef:UniRef90_Q2FYU8
contig_1	Pyrodigal	gene	1367962	1369479	.	+	.	ID=GCA000560365_01318_gene;locus_tag=GCA000560365_01318;gene=katA
contig_1	Pyrodigal	CDS	1367962	1369479	.	+	0	ID=GCA000560365_01318;Name=Catalase;locus_tag=GCA000560365_01318;product=Catalase;Dbxref=GO:0004096,GO:0005737,GO:0020037,GO:0042542,GO:0042744,GO:0046872;gene=katA;Parent=GCA000560365_01318_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0753,COG:P,KEGG:K03781,RefSeq:WP_000082539.1,SO:0001217,UniParc:UPI00000D9DCC,UniRef:UniRef100_Q2FYU7,UniRef:UniRef50_O52762,UniRef:UniRef90_Q2FYU7;ec_number=1.11.1.6
contig_1	Pyrodigal	gene	1369570	1369719	.	+	.	ID=GCA000560365_01319_gene;locus_tag=GCA000560365_01319;gene=rpmG
contig_1	Pyrodigal	CDS	1369570	1369719	.	+	0	ID=GCA000560365_01319;Name=50S ribosomal protein L33;locus_tag=GCA000560365_01319;product=50S ribosomal protein L33;Dbxref=GO:0003735,GO:0005737,GO:0005840,GO:0006412,GO:1990904;gene=rpmG;Parent=GCA000560365_01319_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0267,COG:J,KEGG:K02913,RefSeq:WP_001265708.1,SO:0001217,UniParc:UPI0000132FC6,UniRef:UniRef100_Q2FYU6,UniRef:UniRef50_Q2FYU6,UniRef:UniRef90_Q2FYU6
contig_1	Pyrodigal	gene	1370173	1370442	.	+	.	ID=GCA000560365_01320_gene;locus_tag=GCA000560365_01320;gene=rpsN
contig_1	Pyrodigal	CDS	1370173	1370442	.	+	0	ID=GCA000560365_01320;Name=30S ribosomal protein S14;locus_tag=GCA000560365_01320;product=30S ribosomal protein S14;Dbxref=GO:0003735,GO:0005737,GO:0005840,GO:0006412,GO:0015935,GO:0019843;gene=rpsN;Parent=GCA000560365_01320_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0199,COG:J,RefSeq:WP_001085655.1,SO:0001217,UniParc:UPI000005442A,UniRef:UniRef100_Q2FYU5,UniRef:UniRef50_Q5HPK6,UniRef:UniRef90_Q5HPK6
contig_1	Pyrodigal	gene	1370599	1371576	.	+	.	ID=GCA000560365_01321_gene;locus_tag=GCA000560365_01321
contig_1	Pyrodigal	CDS	1370599	1371576	.	+	0	ID=GCA000560365_01321;Name=GMP reductase;locus_tag=GCA000560365_01321;product=GMP reductase;Parent=GCA000560365_01321_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000688126.1,SO:0001217,UniParc:UPI00004B5BDA,UniRef:UniRef100_Q2FYU4,UniRef:UniRef90_Q4L646
contig_1	Pyrodigal	gene	1371751	1372614	.	+	.	ID=GCA000560365_01322_gene;locus_tag=GCA000560365_01322
contig_1	Pyrodigal	CDS	1371751	1372614	.	+	0	ID=GCA000560365_01322;Name=CAP domain-containing protein;locus_tag=GCA000560365_01322;product=CAP domain-containing protein;Parent=GCA000560365_01322_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000380731.1,SO:0001217,UniParc:UPI00004B5BDB,UniRef:UniRef100_Q2FYU2,UniRef:UniRef50_Q49XD3,UniRef:UniRef90_Q2FYU2
contig_1	Pyrodigal	gene	1372994	1373617	.	-	.	ID=GCA000560365_01323_gene;locus_tag=GCA000560365_01323;gene=lexA
contig_1	Pyrodigal	CDS	1372994	1373617	.	-	0	ID=GCA000560365_01323;Name=transcriptional repressor LexA;locus_tag=GCA000560365_01323;product=transcriptional repressor LexA;Dbxref=GO:0003677,GO:0004252,GO:0006260,GO:0006281,GO:0006508,GO:0009432,GO:0045892;gene=lexA;Parent=GCA000560365_01323_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1974,COG:KT,KEGG:K01356,RefSeq:WP_001208760.1,SO:0001217,UniParc:UPI00000543FA,UniRef:UniRef100_Q2FYU1,UniRef:UniRef50_Q81A92,UniRef:UniRef90_Q2FYU1;ec_number=3.4.21.88
contig_1	Pyrodigal	gene	1373757	1373993	.	+	.	ID=GCA000560365_01324_gene;locus_tag=GCA000560365_01324;gene=sosA
contig_1	Pyrodigal	CDS	1373757	1373993	.	+	0	ID=GCA000560365_01324;Name=DNA damage-induced cell division inhibitor SosA;locus_tag=GCA000560365_01324;product=DNA damage-induced cell division inhibitor SosA;gene=sosA;Parent=GCA000560365_01324_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00003B1AD7,UniRef:UniRef100_Q2FYU0,UniRef:UniRef50_A0A6K8S2R2,UniRef:UniRef90_A0A6K8S2R2
contig_1	Pyrodigal	gene	1374129	1374368	.	+	.	ID=GCA000560365_01325_gene;locus_tag=GCA000560365_01325;gene=ynzC
contig_1	Pyrodigal	CDS	1374129	1374368	.	+	0	ID=GCA000560365_01325;Name=UPF0291 protein SACOL1376;locus_tag=GCA000560365_01325;product=UPF0291 protein SACOL1376;Dbxref=GO:0005737;gene=ynzC;Parent=GCA000560365_01325_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4224,COG:S,RefSeq:WP_000071351.1,SO:0001217,UniParc:UPI00000D776D,UniRef:UniRef100_P60076,UniRef:UniRef50_P60076,UniRef:UniRef90_P60076
contig_1	Pyrodigal	gene	1374489	1376477	.	+	.	ID=GCA000560365_01326_gene;locus_tag=GCA000560365_01326;gene=tkt
contig_1	Pyrodigal	CDS	1374489	1376477	.	+	0	ID=GCA000560365_01326;Name=transketolase;locus_tag=GCA000560365_01326;product=transketolase;Dbxref=GO:0004802,GO:0005829,GO:0006098,GO:0006310,GO:0019253,GO:0046872;gene=tkt;Parent=GCA000560365_01326_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0021,COG:G,KEGG:K00615,RefSeq:WP_000481443.1,SO:0001217,UniParc:UPI00000543E4,UniRef:UniRef100_Q5HG77,UniRef:UniRef50_P22976,UniRef:UniRef90_Q5HG77;ec_number=2.2.1.1
contig_1	Pyrodigal	gene	1376710	1376997	.	+	.	ID=GCA000560365_01327_gene;locus_tag=GCA000560365_01327;gene=yneF
contig_1	Pyrodigal	CDS	1376710	1376997	.	+	0	ID=GCA000560365_01327;Name=UPF0154 protein SaurJH1_1431;locus_tag=GCA000560365_01327;product=UPF0154 protein SaurJH1_1431;Dbxref=GO:0005886;gene=yneF;Parent=GCA000560365_01327_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3763,COG:S,KEGG:K09976,RefSeq:WP_001548645.1,SO:0001217,UniParc:UPI0000696C25,UniRef:UniRef100_P67291,UniRef:UniRef50_P67288,UniRef:UniRef90_P67291
contig_1	Pyrodigal	gene	1377176	1377643	.	+	.	ID=GCA000560365_01328_gene;locus_tag=GCA000560365_01328;gene=ccdC
contig_1	Pyrodigal	CDS	1377176	1377643	.	+	0	ID=GCA000560365_01328;Name=DUF1453 domain-containing protein;locus_tag=GCA000560365_01328;product=DUF1453 domain-containing protein;gene=ccdC;Parent=GCA000560365_01328_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4846,COG:T,RefSeq:WP_000966142.1,SO:0001217,UniParc:UPI00000D7753,UniRef:UniRef100_W8UY14,UniRef:UniRef50_Q2FYT5,UniRef:UniRef90_Q2FYT5
contig_1	Pyrodigal	gene	1377767	1378888	.	+	.	ID=GCA000560365_01329_gene;locus_tag=GCA000560365_01329;gene=sbcD
contig_1	Pyrodigal	CDS	1377767	1378888	.	+	0	ID=GCA000560365_01329;Name=exonuclease subunit SbcD;locus_tag=GCA000560365_01329;product=exonuclease subunit SbcD;Dbxref=GO:0004519,GO:0004527,GO:0006260,GO:0006310,GO:0008408;gene=sbcD;Parent=GCA000560365_01329_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0420,COG:L,RefSeq:WP_000691284.1,SO:0001217,UniParc:UPI00000D9DCF,UniRef:UniRef100_Q2FYT4,UniRef:UniRef50_Q2FYT4,UniRef:UniRef90_Q2FYT4;ec_number=3.1.11.-
contig_1	Pyrodigal	gene	1378892	1381921	.	+	.	ID=GCA000560365_01330_gene;locus_tag=GCA000560365_01330;gene=sbcC
contig_1	Pyrodigal	CDS	1378892	1381921	.	+	0	ID=GCA000560365_01330;Name=exonuclease subunit SbcC;locus_tag=GCA000560365_01330;product=exonuclease subunit SbcC;Dbxref=GO:0004519,GO:0004527,GO:0005524,GO:0006260,GO:0006302,GO:0006310,GO:0016887;gene=sbcC;Parent=GCA000560365_01330_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0419,COG:L,RefSeq:WP_000803164.1,SO:0001217,UniParc:UPI00004B5BDD,UniRef:UniRef100_Q5HG72,UniRef:UniRef50_Q2FYT3,UniRef:UniRef90_Q2FYT3;ec_number=3.1.11.-
contig_1	Pyrodigal	gene	1381992	1382354	.	-	.	ID=GCA000560365_01331_gene;locus_tag=GCA000560365_01331;gene=mscL
contig_1	Pyrodigal	CDS	1381992	1382354	.	-	0	ID=GCA000560365_01331;Name=large conductance mechanosensitive channel protein MscL;locus_tag=GCA000560365_01331;product=large conductance mechanosensitive channel protein MscL;Dbxref=GO:0005886,GO:0008381,GO:0042802;gene=mscL;Parent=GCA000560365_01331_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1970,COG:M,KEGG:K03282,RefSeq:WP_000910489.1,SO:0001217,UniParc:UPI000012F5E4,UniRef:UniRef100_P68805,UniRef:UniRef50_P68805,UniRef:UniRef90_P68805
contig_1	Pyrodigal	gene	1382558	1384204	.	+	.	ID=GCA000560365_01332_gene;locus_tag=GCA000560365_01332;gene=betT
contig_1	Pyrodigal	CDS	1382558	1384204	.	+	0	ID=GCA000560365_01332;Name=Glycine betaine transporter;locus_tag=GCA000560365_01332;product=Glycine betaine transporter;gene=betT;Parent=GCA000560365_01332_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1292,COG:M,RefSeq:WP_001088978.1,SO:0001217,UniParc:UPI00000549F5,UniRef:UniRef100_Q2FYT0,UniRef:UniRef50_A0A1D4R1U3,UniRef:UniRef90_A0A7U7JUD7
contig_1	Infernal	gene	1384481	1384808	.	-	.	ID=GCA000560365_01333_gene;locus_tag=GCA000560365_01333;gene=S35
contig_1	Infernal	ncRNA	1384481	1384808	1.1e-29	-	.	ID=GCA000560365_01333;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000560365_01333;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000560365_01333_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	1385096	1387801	.	+	.	ID=GCA000560365_01334_gene;locus_tag=GCA000560365_01334;gene=acnA
contig_1	Pyrodigal	CDS	1385096	1387801	.	+	0	ID=GCA000560365_01334;Name=aconitate hydratase AcnA;locus_tag=GCA000560365_01334;product=aconitate hydratase AcnA;Dbxref=GO:0003729,GO:0003730,GO:0003994,GO:0006099,GO:0019679,GO:0046872,GO:0047456,GO:0051539;gene=acnA;Parent=GCA000560365_01334_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1048,KEGG:K27802,RefSeq:WP_000729744.1,SO:0001217,UniParc:UPI00000549F4,UniRef:UniRef100_Q5HG69,UniRef:UniRef50_Q9RTN7,UniRef:UniRef90_Q8CPC2;ec_number=4.2.1.3
contig_1	Pyrodigal	gene	1387981	1388448	.	+	.	ID=GCA000560365_01335_gene;locus_tag=GCA000560365_01335;gene=menI
contig_1	Pyrodigal	CDS	1387981	1388448	.	+	0	ID=GCA000560365_01335;Name=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase MenI;locus_tag=GCA000560365_01335;product=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase MenI;Dbxref=GO:0009234;gene=menI;Parent=GCA000560365_01335_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0824,COG:I,KEGG:K07107,RefSeq:WP_031808146.1,SO:0001217,UniParc:UPI00045015FE,UniRef:UniRef100_UPI00045015FE,UniRef:UniRef50_Q2FYS8,UniRef:UniRef90_Q2FYS8;ec_number=3.1.2.28
contig_1	Pyrodigal	gene	1388655	1388951	.	-	.	ID=GCA000560365_01336_gene;locus_tag=GCA000560365_01336;gene=yneR
contig_1	Pyrodigal	CDS	1388655	1388951	.	-	0	ID=GCA000560365_01336;Name=putative protein SAR1364;locus_tag=GCA000560365_01336;product=putative protein SAR1364;gene=yneR;Parent=GCA000560365_01336_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4841,COG:S,RefSeq:WP_001165377.1,SO:0001217,UniParc:UPI00000549F2,UniRef:UniRef100_Q2FYS7,UniRef:UniRef50_Q2FYS7,UniRef:UniRef90_Q2FYS7
contig_1	Infernal	gene	1388944	1389192	.	+	.	ID=GCA000560365_01337_gene;locus_tag=GCA000560365_01337;gene=S35
contig_1	Infernal	ncRNA	1388944	1389192	2.2e-11	+	.	ID=GCA000560365_01337;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000560365_01337;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000560365_01337_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	1389327	1389935	.	-	.	ID=GCA000560365_01338_gene;locus_tag=GCA000560365_01338;gene=plsY
contig_1	Pyrodigal	CDS	1389327	1389935	.	-	0	ID=GCA000560365_01338;Name=glycerol-3-phosphate 1-O-acyltransferase PlsY;locus_tag=GCA000560365_01338;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;Dbxref=GO:0005886,GO:0006654,GO:0008374,GO:0008654,GO:0043772;gene=plsY;Parent=GCA000560365_01338_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0344,COG:I,KEGG:K08591,RefSeq:WP_000972781.1,SO:0001217,UniParc:UPI00000549F0,UniRef:UniRef100_Q2FYS6,UniRef:UniRef50_Q2FYS6,UniRef:UniRef90_Q2FYS6;ec_number=2.3.1.275
contig_1	Pyrodigal	gene	1390141	1392132	.	+	.	ID=GCA000560365_01339_gene;locus_tag=GCA000560365_01339;gene=parE
contig_1	Pyrodigal	CDS	1390141	1392132	.	+	0	ID=GCA000560365_01339;Name=DNA topoisomerase IV subunit B;locus_tag=GCA000560365_01339;product=DNA topoisomerase IV subunit B;Dbxref=GO:0003677,GO:0003918,GO:0005524,GO:0005694,GO:0006265,GO:0007059,GO:0034335,GO:0046872;gene=parE;Parent=GCA000560365_01339_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0187,COG:L,RefSeq:WP_001548666.1,SO:0001217,UniParc:UPI000011D798,UniRef:UniRef100_Q2FYS5,UniRef:UniRef50_Q59961,UniRef:UniRef90_Q2FYS5;ec_number=5.6.2.2
contig_1	Pyrodigal	gene	1392132	1394534	.	+	.	ID=GCA000560365_01340_gene;locus_tag=GCA000560365_01340;gene=parC
contig_1	Pyrodigal	CDS	1392132	1394534	.	+	0	ID=GCA000560365_01340;Name=DNA topoisomerase IV subunit A;locus_tag=GCA000560365_01340;product=DNA topoisomerase IV subunit A;Dbxref=GO:0003677,GO:0003918,GO:0005524,GO:0005694,GO:0005737,GO:0006265,GO:0007059,GO:0009330,GO:0019897,GO:0034335;gene=parC;Parent=GCA000560365_01340_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0188,COG:L,RefSeq:WP_001289589.1,SO:0001217,UniParc:UPI0000696C29,UniRef:UniRef100_A0A5P6T2Z4,UniRef:UniRef50_P72525,UniRef:UniRef90_Q2FYS4;ec_number=5.6.2.2
contig_1	Pyrodigal	gene	1394784	1396244	.	+	.	ID=GCA000560365_01341_gene;locus_tag=GCA000560365_01341;gene=alsT
contig_1	Pyrodigal	CDS	1394784	1396244	.	+	0	ID=GCA000560365_01341;Name=Amino acid carrier protein;locus_tag=GCA000560365_01341;product=Amino acid carrier protein;gene=alsT;Parent=GCA000560365_01341_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1115,COG:E,KEGG:K03310,RefSeq:WP_000651160.1,SO:0001217,UniParc:UPI00000D7777,UniRef:UniRef100_Q2G2N5,UniRef:UniRef50_A0A078M5B3,UniRef:UniRef90_A0A0U1MK54
contig_1	Pyrodigal	gene	1396744	1397595	.	+	.	ID=GCA000560365_01342_gene;locus_tag=GCA000560365_01342;gene=glcT
contig_1	Pyrodigal	CDS	1396744	1397595	.	+	0	ID=GCA000560365_01342;Name=glucose PTS transporter transcription antiterminator GlcT;locus_tag=GCA000560365_01342;product=glucose PTS transporter transcription antiterminator GlcT;Dbxref=GO:0003723,GO:0045893;gene=glcT;Parent=GCA000560365_01342_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3711,COG:K,KEGG:K03480,RefSeq:WP_000505015.1,SO:0001217,UniParc:UPI00000D7867,UniRef:UniRef100_Q2G2N4,UniRef:UniRef50_O33618,UniRef:UniRef90_Q2G2N4
contig_1	Pyrodigal	gene	1397790	1398938	.	+	.	ID=GCA000560365_01343_gene;locus_tag=GCA000560365_01343;gene=perM
contig_1	Pyrodigal	CDS	1397790	1398938	.	+	0	ID=GCA000560365_01343;Name=AI-2E family transporter;locus_tag=GCA000560365_01343;product=AI-2E family transporter;gene=perM;Parent=GCA000560365_01343_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0628,COG:R,RefSeq:WP_000673632.1,SO:0001217,UniParc:UPI0001BAF7E0,UniRef:UniRef100_Q2G2N2,UniRef:UniRef50_Q2G2N2,UniRef:UniRef90_Q2G2N2
contig_1	Pyrodigal	gene	1399419	1401941	.	+	.	ID=GCA000560365_01344_gene;locus_tag=GCA000560365_01344;gene=mprF
contig_1	Pyrodigal	CDS	1399419	1401941	.	+	0	ID=GCA000560365_01344;Name=bifunctional lysylphosphatidylglycerol flippase/synthetase MprF;locus_tag=GCA000560365_01344;product=bifunctional lysylphosphatidylglycerol flippase/synthetase MprF;Dbxref=GO:0005886,GO:0006629,GO:0046677,GO:0050071,GO:0055091;gene=mprF;Parent=GCA000560365_01344_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2898,COG:I,KEGG:K14205,RefSeq:WP_001071135.1,SO:0001217,UniParc:UPI0000052264,UniRef:UniRef100_Q2G2M2,UniRef:UniRef50_Q2G2M2,UniRef:UniRef90_Q2G2M2;ec_number=2.3.2.3
contig_1	Pyrodigal	gene	1402144	1402653	.	-	.	ID=GCA000560365_01345_gene;locus_tag=GCA000560365_01345;gene=msrA1
contig_1	Pyrodigal	CDS	1402144	1402653	.	-	0	ID=GCA000560365_01345;Name=Peptide methionine sulfoxide reductase MsrA 1;locus_tag=GCA000560365_01345;product=Peptide methionine sulfoxide reductase MsrA 1;Dbxref=GO:0008113,GO:0033744,GO:0036211;gene=msrA1;Parent=GCA000560365_01345_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0225,COG:O,RefSeq:WP_001024830.1,SO:0001217,UniParc:UPI000012F5B2,UniRef:UniRef100_P0A084,UniRef:UniRef50_P0A084,UniRef:UniRef90_P0A084;ec_number=1.8.4.11
contig_1	Pyrodigal	gene	1402790	1403773	.	+	.	ID=GCA000560365_01346_gene;locus_tag=GCA000560365_01346;gene=msrR
contig_1	Pyrodigal	CDS	1402790	1403773	.	+	0	ID=GCA000560365_01346;Name=Regulatory protein MsrR;locus_tag=GCA000560365_01346;product=Regulatory protein MsrR;Dbxref=GO:0005886;gene=msrR;Parent=GCA000560365_01346_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1316,COG:M,KEGG:K01005,RefSeq:WP_000356975.1,SO:0001217,UniParc:UPI00000549E5,UniRef:UniRef100_Q7BHL7,UniRef:UniRef50_Q7BHL7,UniRef:UniRef90_Q7BHL7;ec_number=2.7.8.-
contig_1	Pyrodigal	gene	1403861	1404049	.	-	.	ID=GCA000560365_01347_gene;locus_tag=GCA000560365_01347;gene=pptA
contig_1	Pyrodigal	CDS	1403861	1404049	.	-	0	ID=GCA000560365_01347;Name=2-hydroxymuconate tautomerase;locus_tag=GCA000560365_01347;product=2-hydroxymuconate tautomerase;Dbxref=GO:0008152,GO:0016853,GO:0016862;gene=pptA;Parent=GCA000560365_01347_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1942,COG:Q,RefSeq:WP_001548680.1,SO:0001217,UniParc:UPI00000549E3,UniRef:UniRef100_P99132,UniRef:UniRef50_Q814P5,UniRef:UniRef90_P99132;ec_number=5.3.2.6
contig_1	Pyrodigal	gene	1404194	1405150	.	+	.	ID=GCA000560365_01348_gene;locus_tag=GCA000560365_01348
contig_1	Pyrodigal	CDS	1404194	1405150	.	+	0	ID=GCA000560365_01348;Name=Y-family DNA polymerase;locus_tag=GCA000560365_01348;product=Y-family DNA polymerase;Parent=GCA000560365_01348_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A3E0IME2,UniRef:UniRef90_UPI0021AB9F04
contig_1	Pyrodigal	gene	1405147	1405455	.	+	.	ID=GCA000560365_01349_gene;locus_tag=GCA000560365_01349
contig_1	Pyrodigal	CDS	1405147	1405455	.	+	0	ID=GCA000560365_01349;Name=Truncated ImpB/MucB/SamB family protein (Fragment 2);locus_tag=GCA000560365_01349;product=Truncated ImpB/MucB/SamB family protein (Fragment 2);Parent=GCA000560365_01349_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_B9DP45
contig_1	Pyrodigal	gene	1405592	1406683	.	-	.	ID=GCA000560365_01350_gene;locus_tag=GCA000560365_01350;gene=tyrA
contig_1	Pyrodigal	CDS	1405592	1406683	.	-	0	ID=GCA000560365_01350;Name=prephenate dehydrogenase;locus_tag=GCA000560365_01350;product=prephenate dehydrogenase;Dbxref=GO:0004665,GO:0006571,GO:0008977,GO:0070403;gene=tyrA;Parent=GCA000560365_01350_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0287,COG:E,RefSeq:WP_000214266.1,SO:0001217,UniParc:UPI00000D9DD5,UniRef:UniRef100_Q2FH71,UniRef:UniRef50_Q2FYS1,UniRef:UniRef90_Q2FYS1;ec_number=1.3.1.12
contig_1	Pyrodigal	gene	1406848	1407879	.	+	.	ID=GCA000560365_01351_gene;locus_tag=GCA000560365_01351;gene=frvX
contig_1	Pyrodigal	CDS	1406848	1407879	.	+	0	ID=GCA000560365_01351;Name=Aminopeptidase;locus_tag=GCA000560365_01351;product=Aminopeptidase;gene=frvX;Parent=GCA000560365_01351_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1363,COG:EG,KEGG:K01269,RefSeq:WP_000433363.1,SO:0001217,UniParc:UPI00004B5BE1,UniRef:UniRef100_A0A0E7NTZ3,UniRef:UniRef50_O07603,UniRef:UniRef90_A0A0E7NTZ3;ec_number=3.4.11.-
contig_1	Pyrodigal	gene	1408371	1409777	.	+	.	ID=GCA000560365_01352_gene;locus_tag=GCA000560365_01352;gene=trpE
contig_1	Pyrodigal	CDS	1408371	1409777	.	+	0	ID=GCA000560365_01352;Name=anthranilate synthase component I;locus_tag=GCA000560365_01352;product=anthranilate synthase component I;gene=trpE;Parent=GCA000560365_01352_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0147,COG:EH,KEGG:K01657,RefSeq:WP_000350976.1,SO:0001217,UniParc:UPI0000696C2B,UniRef:UniRef100_A0A5A8VEJ8,UniRef:UniRef50_A0A6N3A4A0,UniRef:UniRef90_A0A7U7EYB1;ec_number=4.1.3.27
contig_1	Pyrodigal	gene	1409774	1410340	.	+	.	ID=GCA000560365_01353_gene;locus_tag=GCA000560365_01353
contig_1	Pyrodigal	CDS	1409774	1410340	.	+	0	ID=GCA000560365_01353;Name=Anthranilate synthase component II;locus_tag=GCA000560365_01353;product=Anthranilate synthase component II;Parent=GCA000560365_01353_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000604817.1,SO:0001217,UniParc:UPI00000549DE,UniRef:UniRef100_Q2FYR8,UniRef:UniRef50_B9DP49,UniRef:UniRef90_A0A077UJD9
contig_1	Pyrodigal	gene	1410346	1411344	.	+	.	ID=GCA000560365_01354_gene;locus_tag=GCA000560365_01354;gene=trpD
contig_1	Pyrodigal	CDS	1410346	1411344	.	+	0	ID=GCA000560365_01354;Name=Anthranilate phosphoribosyltransferase;locus_tag=GCA000560365_01354;product=Anthranilate phosphoribosyltransferase;Dbxref=GO:0000162,GO:0000287,GO:0004048,GO:0005829;gene=trpD;Parent=GCA000560365_01354_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0547,COG:E,KEGG:K00766,RefSeq:WP_000173832.1,SO:0001217,UniParc:UPI0000232DA1,UniRef:UniRef100_Q2FYR7,UniRef:UniRef50_Q2FYR7,UniRef:UniRef90_Q2FYR7;ec_number=2.4.2.18
contig_1	Pyrodigal	gene	1411346	1412128	.	+	.	ID=GCA000560365_01355_gene;locus_tag=GCA000560365_01355;gene=trpC
contig_1	Pyrodigal	CDS	1411346	1412128	.	+	0	ID=GCA000560365_01355;Name=indole-3-glycerol phosphate synthase TrpC;locus_tag=GCA000560365_01355;product=indole-3-glycerol phosphate synthase TrpC;Dbxref=GO:0000162,GO:0004425,GO:0004640,GO:0006568;gene=trpC;Parent=GCA000560365_01355_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0134,COG:E,RefSeq:WP_000154116.1,SO:0001217,UniParc:UPI0000137562,UniRef:UniRef100_Q2FYR6,UniRef:UniRef50_Q2FYR6,UniRef:UniRef90_Q2FYR6;ec_number=4.1.1.48
contig_1	Pyrodigal	gene	1412125	1412760	.	+	.	ID=GCA000560365_01356_gene;locus_tag=GCA000560365_01356;gene=trpF
contig_1	Pyrodigal	CDS	1412125	1412760	.	+	0	ID=GCA000560365_01356;Name=phosphoribosylanthranilate isomerase;locus_tag=GCA000560365_01356;product=phosphoribosylanthranilate isomerase;Dbxref=GO:0000162,GO:0004640,GO:0006568;gene=trpF;Parent=GCA000560365_01356_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0135,COG:E,SO:0001217,UniParc:UPI00000549DB,UniRef:UniRef100_Q2FYR5,UniRef:UniRef50_Q2FYR5,UniRef:UniRef90_Q2FYR5;ec_number=5.3.1.24
contig_1	Pyrodigal	gene	1412753	1413967	.	+	.	ID=GCA000560365_01357_gene;locus_tag=GCA000560365_01357;gene=trpB
contig_1	Pyrodigal	CDS	1412753	1413967	.	+	0	ID=GCA000560365_01357;Name=tryptophan synthase subunit beta;locus_tag=GCA000560365_01357;product=tryptophan synthase subunit beta;Dbxref=GO:0000162,GO:0004834,GO:0005737,GO:0006568;gene=trpB;Parent=GCA000560365_01357_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0133,COG:E,RefSeq:WP_001041337.1,SO:0001217,UniParc:UPI00000549DA,UniRef:UniRef100_Q2FYR4,UniRef:UniRef50_P07600,UniRef:UniRef90_Q2FYR4;ec_number=4.2.1.20
contig_1	Pyrodigal	gene	1413960	1414688	.	+	.	ID=GCA000560365_01358_gene;locus_tag=GCA000560365_01358;gene=trpA
contig_1	Pyrodigal	CDS	1413960	1414688	.	+	0	ID=GCA000560365_01358;Name=tryptophan synthase subunit alpha;locus_tag=GCA000560365_01358;product=tryptophan synthase subunit alpha;Dbxref=GO:0000162,GO:0004834,GO:0005829,GO:0006568;gene=trpA;Parent=GCA000560365_01358_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0159,COG:E,KEGG:K01695,RefSeq:WP_000163627.1,SO:0001217,UniParc:UPI00000D9DD8,UniRef:UniRef100_Q2FYR3,UniRef:UniRef50_Q2FYR3,UniRef:UniRef90_Q2FYR3;ec_number=4.2.1.20
contig_1	Pyrodigal	gene	1415010	1416272	.	+	.	ID=GCA000560365_01359_gene;locus_tag=GCA000560365_01359;gene=femA
contig_1	Pyrodigal	CDS	1415010	1416272	.	+	0	ID=GCA000560365_01359;Name=glycine glycyltransferase FemA;locus_tag=GCA000560365_01359;product=glycine glycyltransferase FemA;Dbxref=GO:0000166,GO:0005737,GO:0008360,GO:0009252,GO:0016755,GO:0046677,GO:0071555;gene=femA;Parent=GCA000560365_01359_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000673309,COG:COG2348,COG:M,RefSeq:WP_000673309.1,SO:0001217,UniParc:UPI0000167807,UniRef:UniRef100_Q2FYR2,UniRef:UniRef50_Q2FYR2,UniRef:UniRef90_Q2FYR2;ec_number=2.3.2.17
contig_1	Pyrodigal	gene	1416291	1417550	.	+	.	ID=GCA000560365_01360_gene;locus_tag=GCA000560365_01360;gene=femB
contig_1	Pyrodigal	CDS	1416291	1417550	.	+	0	ID=GCA000560365_01360;Name=glycine glycyltransferase FemB;locus_tag=GCA000560365_01360;product=glycine glycyltransferase FemB;Dbxref=GO:0005737,GO:0008360,GO:0009252,GO:0016755,GO:0071555;gene=femB;Parent=GCA000560365_01360_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000673098,COG:COG2348,COG:M,KEGG:K11695,RefSeq:WP_000673098.1,SO:0001217,UniParc:UPI00000549D5,UniRef:UniRef100_Q2FYR1,UniRef:UniRef50_Q2FYR1,UniRef:UniRef90_Q2FYR1;ec_number=2.3.2.18
contig_1	Pyrodigal	gene	1418239	1419006	.	+	.	ID=GCA000560365_01361_gene;locus_tag=GCA000560365_01361;gene=cof
contig_1	Pyrodigal	CDS	1418239	1419006	.	+	0	ID=GCA000560365_01361;Name=Hydrolase;locus_tag=GCA000560365_01361;product=Hydrolase;gene=cof;Parent=GCA000560365_01361_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0561,COG:HR,RefSeq:WP_001213019.1,SO:0001217,UniParc:UPI0000006608,UniRef:UniRef100_Q2FYR0,UniRef:UniRef50_Q2FYR0,UniRef:UniRef90_Q2FYR0
contig_1	Pyrodigal	gene	1419054	1419527	.	-	.	ID=GCA000560365_01362_gene;locus_tag=GCA000560365_01362
contig_1	Pyrodigal	CDS	1419054	1419527	.	-	0	ID=GCA000560365_01362;Name=SWIM-type domain-containing protein;locus_tag=GCA000560365_01362;product=SWIM-type domain-containing protein;Parent=GCA000560365_01362_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000523665.1,SO:0001217,UniParc:UPI0000006607,UniRef:UniRef100_Q2FYQ9,UniRef:UniRef50_Q2FYQ9,UniRef:UniRef90_Q2FYQ9
contig_1	Pyrodigal	gene	1419651	1420352	.	-	.	ID=GCA000560365_01363_gene;locus_tag=GCA000560365_01363;gene=nikE
contig_1	Pyrodigal	CDS	1419651	1420352	.	-	0	ID=GCA000560365_01363;Name=Nickel import system ATP-binding protein NikE;locus_tag=GCA000560365_01363;product=Nickel import system ATP-binding protein NikE;Dbxref=GO:0005524,GO:0005886,GO:0015413,GO:0016887;gene=nikE;Parent=GCA000560365_01363_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1124,COG:EP,RefSeq:WP_000571258.1,SO:0001217,UniParc:UPI00000549D3,UniRef:UniRef100_Q2FYQ8,UniRef:UniRef50_Q2FYQ8,UniRef:UniRef90_Q2FYQ8;ec_number=7.2.2.11
contig_1	Pyrodigal	gene	1420345	1421121	.	-	.	ID=GCA000560365_01364_gene;locus_tag=GCA000560365_01364;gene=nikD
contig_1	Pyrodigal	CDS	1420345	1421121	.	-	0	ID=GCA000560365_01364;Name=Nickel import system ATP-binding protein NikD;locus_tag=GCA000560365_01364;product=Nickel import system ATP-binding protein NikD;Dbxref=GO:0005524,GO:0005886,GO:0015413,GO:0016887;gene=nikD;Parent=GCA000560365_01364_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0444,COG:EP,SO:0001217,UniParc:UPI00000BE13D,UniRef:UniRef100_A0A0D6HNB7,UniRef:UniRef50_Q2FYQ7,UniRef:UniRef90_Q2FYQ7;ec_number=7.2.2.11
contig_1	Pyrodigal	gene	1421105	1421935	.	-	.	ID=GCA000560365_01365_gene;locus_tag=GCA000560365_01365;gene=nikC
contig_1	Pyrodigal	CDS	1421105	1421935	.	-	0	ID=GCA000560365_01365;Name=nickel transporter permease;locus_tag=GCA000560365_01365;product=nickel transporter permease;Dbxref=GO:0005886,GO:0015675,GO:0043190,GO:0055085,GO:0140359;gene=nikC;Parent=GCA000560365_01365_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1173,COG:EP,RefSeq:WP_000548932.1,SO:0001217,UniParc:UPI0000006604,UniRef:UniRef100_Q2FYQ6,UniRef:UniRef50_Q2FYQ6,UniRef:UniRef90_Q2FYQ6
contig_1	Pyrodigal	gene	1421928	1422914	.	-	.	ID=GCA000560365_01366_gene;locus_tag=GCA000560365_01366;gene=nikB
contig_1	Pyrodigal	CDS	1421928	1422914	.	-	0	ID=GCA000560365_01366;Name=nickel ABC transporter permease;locus_tag=GCA000560365_01366;product=nickel ABC transporter permease;Dbxref=GO:0005886,GO:0015099,GO:0043190,GO:0140359;gene=nikB;Parent=GCA000560365_01366_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0601,COG:EP,RefSeq:WP_000469949.1,SO:0001217,UniParc:UPI0000006603,UniRef:UniRef100_Q2FYQ5,UniRef:UniRef50_Q2FYQ5,UniRef:UniRef90_Q2FYQ5
contig_1	Pyrodigal	gene	1423218	1423562	.	-	.	ID=GCA000560365_01367_gene;locus_tag=GCA000560365_01367
contig_1	Pyrodigal	CDS	1423218	1423562	.	-	0	ID=GCA000560365_01367;Name=Permease;locus_tag=GCA000560365_01367;product=Permease;Parent=GCA000560365_01367_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000171798.1,SO:0001217,UniParc:UPI00000D788B,UniRef:UniRef100_Q2FYQ3,UniRef:UniRef50_A0A3A0VJ57,UniRef:UniRef90_Q2FYQ3
contig_1	Pyrodigal	gene	1423767	1425581	.	+	.	ID=GCA000560365_01368_gene;locus_tag=GCA000560365_01368;gene=pepF
contig_1	Pyrodigal	CDS	1423767	1425581	.	+	0	ID=GCA000560365_01368;Name=oligoendopeptidase F;locus_tag=GCA000560365_01368;product=oligoendopeptidase F;Dbxref=GO:0004222,GO:0006508;gene=pepF;Parent=GCA000560365_01368_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1164,COG:E,KEGG:K08602,RefSeq:WP_000077571.1,SO:0001217,UniParc:UPI00000CAA92,UniRef:UniRef100_Q2FYQ2,UniRef:UniRef50_A0A7X9ZKX9,UniRef:UniRef90_A0A641AAT8;ec_number=3.4.24.-
contig_1	Pyrodigal	gene	1425721	1426362	.	-	.	ID=GCA000560365_01369_gene;locus_tag=GCA000560365_01369;gene=phoU
contig_1	Pyrodigal	CDS	1425721	1426362	.	-	0	ID=GCA000560365_01369;Name=phosphate signaling complex protein PhoU;locus_tag=GCA000560365_01369;product=phosphate signaling complex protein PhoU;Dbxref=GO:0006817,GO:0030643,GO:0045936;gene=phoU;Parent=GCA000560365_01369_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0704,COG:P,RefSeq:WP_000974847.1,SO:0001217,UniParc:UPI00000549CE,UniRef:UniRef100_Q2FYQ1,UniRef:UniRef50_A0A4R6BXI3,UniRef:UniRef90_A0A2K4AIT2
contig_1	Pyrodigal	gene	1426369	1427220	.	-	.	ID=GCA000560365_01370_gene;locus_tag=GCA000560365_01370;gene=pstB
contig_1	Pyrodigal	CDS	1426369	1427220	.	-	0	ID=GCA000560365_01370;Name=phosphate ABC transporter ATP-binding protein PstB;locus_tag=GCA000560365_01370;product=phosphate ABC transporter ATP-binding protein PstB;Dbxref=GO:0005524,GO:0005886,GO:0006817,GO:0009898,GO:0015415,GO:0016887,GO:0035435,GO:0055052;gene=pstB;Parent=GCA000560365_01370_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1117,COG:P,RefSeq:WP_000079447.1,SO:0001217,UniParc:UPI00000549CD,UniRef:UniRef100_Q2FYQ0,UniRef:UniRef50_Q2FYQ0,UniRef:UniRef90_Q2FYQ0;ec_number=7.3.2.1
contig_1	Pyrodigal	gene	1427267	1428184	.	-	.	ID=GCA000560365_01371_gene;locus_tag=GCA000560365_01371;gene=pstA
contig_1	Pyrodigal	CDS	1427267	1428184	.	-	0	ID=GCA000560365_01371;Name=phosphate ABC transporter permease PstA;locus_tag=GCA000560365_01371;product=phosphate ABC transporter permease PstA;Dbxref=GO:0005886,GO:0006817,GO:0015415,GO:0055052;gene=pstA;Parent=GCA000560365_01371_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0581,COG:P,RefSeq:WP_000450297.1,SO:0001217,UniParc:UPI00000549CC,UniRef:UniRef100_Q2FYP9,UniRef:UniRef50_B9E6T5,UniRef:UniRef90_A0A380EIN5
contig_1	Pyrodigal	gene	1428186	1429112	.	-	.	ID=GCA000560365_01372_gene;locus_tag=GCA000560365_01372;gene=pstC
contig_1	Pyrodigal	CDS	1428186	1429112	.	-	0	ID=GCA000560365_01372;Name=phosphate ABC transporter permease subunit PstC;locus_tag=GCA000560365_01372;product=phosphate ABC transporter permease subunit PstC;Dbxref=GO:0005886,GO:0006817,GO:0015415,GO:0055052;gene=pstC;Parent=GCA000560365_01372_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0573,COG:P,RefSeq:WP_000204625.1,SO:0001217,UniParc:UPI00000D9DE2,UniRef:UniRef100_Q2FYP8,UniRef:UniRef50_A0A235FA99,UniRef:UniRef90_A0A380EHK1
contig_1	Pyrodigal	gene	1429303	1430286	.	-	.	ID=GCA000560365_01373_gene;locus_tag=GCA000560365_01373;gene=pstS
contig_1	Pyrodigal	CDS	1429303	1430286	.	-	0	ID=GCA000560365_01373;Name=Phosphate-binding protein PstS;locus_tag=GCA000560365_01373;product=Phosphate-binding protein PstS;Dbxref=GO:0005886,GO:0006817,GO:0042301;gene=pstS;Parent=GCA000560365_01373_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0226,COG:P,RefSeq:WP_000759232.1,SO:0001217,UniParc:UPI00000549C9,UniRef:UniRef100_Q2FYP6,UniRef:UniRef50_Q49XJ1,UniRef:UniRef90_Q2FYP6
contig_1	Pyrodigal	gene	1431258	1432160	.	-	.	ID=GCA000560365_01374_gene;locus_tag=GCA000560365_01374;gene=cvfB
contig_1	Pyrodigal	CDS	1431258	1432160	.	-	0	ID=GCA000560365_01374;Name=RNA-binding virulence regulatory protein CvfB;locus_tag=GCA000560365_01374;product=RNA-binding virulence regulatory protein CvfB;gene=cvfB;Parent=GCA000560365_01374_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001095445,BlastRules:WP_001162352,RefSeq:WP_001162359.1,SO:0001217,UniParc:UPI00000549C7,UniRef:UniRef100_Q2FYP3,UniRef:UniRef50_Q2FYP3,UniRef:UniRef90_Q2FYP3
contig_1	Pyrodigal	gene	1432307	1433908	.	+	.	ID=GCA000560365_01375_gene;locus_tag=GCA000560365_01375;gene=uup
contig_1	Pyrodigal	CDS	1432307	1433908	.	+	0	ID=GCA000560365_01375;Name=ABC transporter domain-containing protein;locus_tag=GCA000560365_01375;product=ABC transporter domain-containing protein;gene=uup;Parent=GCA000560365_01375_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0488,COG:R,RefSeq:WP_000942300.1,SO:0001217,UniParc:UPI00000D9DE5,UniRef:UniRef100_Q2FYP2,UniRef:UniRef50_R5Y8E8,UniRef:UniRef90_S2YJP1
contig_1	Infernal	regulatory_region	1434511	1434686	1.8e-15	+	.	ID=KMHODOBJJH_173;Name=Lysine riboswitch aptamer;product=Lysine riboswitch aptamer;Dbxref=RFAM:RF00168;inference=profile:Rfam:RF00168;Note=SO:0000035;regulatory_class=riboswitch
contig_1	Pyrodigal	gene	1434768	1435973	.	+	.	ID=GCA000560365_01376_gene;locus_tag=GCA000560365_01376;gene=metL1
contig_1	Pyrodigal	CDS	1434768	1435973	.	+	0	ID=GCA000560365_01376;Name=aspartate kinase;locus_tag=GCA000560365_01376;product=aspartate kinase;gene=metL1;Parent=GCA000560365_01376_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0527,COG:E,RefSeq:WP_000258711.1,SO:0001217,UniParc:UPI0000696C2C,UniRef:UniRef100_A0A0E8GBM7,UniRef:UniRef50_B9EBZ4,UniRef:UniRef90_A0A0H2WZ50;ec_number=2.7.2.4
contig_1	Pyrodigal	gene	1436037	1437026	.	+	.	ID=GCA000560365_01377_gene;locus_tag=GCA000560365_01377;gene=asd
contig_1	Pyrodigal	CDS	1436037	1437026	.	+	0	ID=GCA000560365_01377;Name=aspartate-semialdehyde dehydrogenase;locus_tag=GCA000560365_01377;product=aspartate-semialdehyde dehydrogenase;Dbxref=GO:0004073,GO:0008652,GO:0016620,GO:0051287;gene=asd;Parent=GCA000560365_01377_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0136,COG:E,KEGG:K00133,RefSeq:WP_000163531.1,SO:0001217,UniParc:UPI00000549C4,UniRef:UniRef100_Q2FYP0,UniRef:UniRef50_A0A2T4PUK5,UniRef:UniRef90_A0A7Z7QZD9;ec_number=1.2.1.11
contig_1	Pyrodigal	gene	1437028	1437915	.	+	.	ID=GCA000560365_01378_gene;locus_tag=GCA000560365_01378;gene=dapA
contig_1	Pyrodigal	CDS	1437028	1437915	.	+	0	ID=GCA000560365_01378;Name=4-hydroxy-tetrahydrodipicolinate synthase;locus_tag=GCA000560365_01378;product=4-hydroxy-tetrahydrodipicolinate synthase;Dbxref=GO:0005829,GO:0008840,GO:0009089,GO:0019877;gene=dapA;Parent=GCA000560365_01378_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0329,COG:EM,RefSeq:WP_000149257.1,SO:0001217,UniParc:UPI00000549C3,UniRef:UniRef100_Q9EZ12,UniRef:UniRef50_Q6GH13,UniRef:UniRef90_Q6GH13;ec_number=4.3.3.7
contig_1	Pyrodigal	gene	1437912	1438634	.	+	.	ID=GCA000560365_01379_gene;locus_tag=GCA000560365_01379;gene=dapB
contig_1	Pyrodigal	CDS	1437912	1438634	.	+	0	ID=GCA000560365_01379;Name=4-hydroxy-tetrahydrodipicolinate reductase;locus_tag=GCA000560365_01379;product=4-hydroxy-tetrahydrodipicolinate reductase;Dbxref=GO:0005829,GO:0008839,GO:0009089,GO:0016726,GO:0019877,GO:0050661,GO:0051287;gene=dapB;Parent=GCA000560365_01379_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0289,COG:E,KEGG:K00215,RefSeq:WP_000698235.1,SO:0001217,UniParc:UPI00004B5BE7,UniRef:UniRef100_Q9EZ11,UniRef:UniRef50_Q9EZ11,UniRef:UniRef90_Q9EZ11;ec_number=1.17.1.8
contig_1	Pyrodigal	gene	1438661	1439380	.	+	.	ID=GCA000560365_01380_gene;locus_tag=GCA000560365_01380;gene=dapD
contig_1	Pyrodigal	CDS	1438661	1439380	.	+	0	ID=GCA000560365_01380;Name=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-acetyltransferase;locus_tag=GCA000560365_01380;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-acetyltransferase;Dbxref=GO:0009089,GO:0019877,GO:0047200;gene=dapD;Parent=GCA000560365_01380_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2171,COG:E,KEGG:K05822,RefSeq:WP_000249839.1,SO:0001217,UniParc:UPI00000549C1,UniRef:UniRef100_Q2FYN7,UniRef:UniRef50_A8F8L8,UniRef:UniRef90_Q2FYN7;ec_number=2.3.1.89
contig_1	Pyrodigal	gene	1439523	1440674	.	+	.	ID=GCA000560365_01381_gene;locus_tag=GCA000560365_01381;gene=abgB
contig_1	Pyrodigal	CDS	1439523	1440674	.	+	0	ID=GCA000560365_01381;Name=putative hydrolase SAS1339;locus_tag=GCA000560365_01381;product=putative hydrolase SAS1339;Dbxref=GO:0016787;gene=abgB;Parent=GCA000560365_01381_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1473,COG:R,RefSeq:WP_001003793.1,SO:0001217,UniParc:UPI00000D9DE8,UniRef:UniRef100_Q2FYN6,UniRef:UniRef50_Q2FYN6,UniRef:UniRef90_Q2FYN6;ec_number=3.-.-.-
contig_1	Pyrodigal	gene	1440679	1441764	.	+	.	ID=GCA000560365_01382_gene;locus_tag=GCA000560365_01382;gene=alr2
contig_1	Pyrodigal	CDS	1440679	1441764	.	+	0	ID=GCA000560365_01382;Name=Alanine racemase 2;locus_tag=GCA000560365_01382;product=Alanine racemase 2;Dbxref=GO:0005829,GO:0008784,GO:0009252,GO:0030170,GO:0030632;gene=alr2;Parent=GCA000560365_01382_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0787,COG:M,KEGG:K01775,RefSeq:WP_000127593.1,SO:0001217,UniParc:UPI00001258DA,UniRef:UniRef100_Q9EZ08,UniRef:UniRef50_Q9EZ08,UniRef:UniRef90_Q9EZ08;ec_number=5.1.1.1
contig_1	Pyrodigal	gene	1441754	1443019	.	+	.	ID=GCA000560365_01383_gene;locus_tag=GCA000560365_01383;gene=lysA
contig_1	Pyrodigal	CDS	1441754	1443019	.	+	0	ID=GCA000560365_01383;Name=diaminopimelate decarboxylase;locus_tag=GCA000560365_01383;product=diaminopimelate decarboxylase;Dbxref=GO:0008836,GO:0009089,GO:0030170,GO:0046677;gene=lysA;Parent=GCA000560365_01383_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0019,COG:E,KEGG:K01586,RefSeq:WP_000216946.1,SO:0001217,UniParc:UPI00000549BE,UniRef:UniRef100_Q5HG20,UniRef:UniRef50_Q5HG20,UniRef:UniRef90_Q5HG20;ec_number=4.1.1.20
contig_1	Pyrodigal	gene	1443259	1443660	.	-	.	ID=GCA000560365_01384_gene;locus_tag=GCA000560365_01384;gene=msaC
contig_1	Pyrodigal	CDS	1443259	1443660	.	-	0	ID=GCA000560365_01384;Name=sarA expression modulator MsaC;locus_tag=GCA000560365_01384;product=sarA expression modulator MsaC;Dbxref=GO:0005886;gene=msaC;Parent=GCA000560365_01384_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000876201,RefSeq:WP_000876201.1,SO:0001217,UniParc:UPI00000D776A,UniRef:UniRef100_Q2FYN3,UniRef:UniRef50_Q2FYN3,UniRef:UniRef90_Q2FYN3
contig_1	Pyrodigal	gene	1443857	1444057	.	-	.	ID=GCA000560365_01385_gene;locus_tag=GCA000560365_01385;gene=cspA
contig_1	Pyrodigal	CDS	1443857	1444057	.	-	0	ID=GCA000560365_01385;Name=cold shock protein CspA;locus_tag=GCA000560365_01385;product=cold shock protein CspA;Dbxref=GO:0003676,GO:0005737;gene=cspA;Parent=GCA000560365_01385_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000809131,COG:COG1278,COG:K,KEGG:K03704,RefSeq:WP_000809131.1,SO:0001217,UniParc:UPI00000D7888,UniRef:UniRef100_Q2FYN2,UniRef:UniRef50_P42016,UniRef:UniRef90_Q2FYN2
contig_1	Pyrodigal	gene	1444228	1444536	.	-	.	ID=GCA000560365_01386_gene;locus_tag=GCA000560365_01386;gene=msaA
contig_1	Pyrodigal	CDS	1444228	1444536	.	-	0	ID=GCA000560365_01386;Name=regulatory protein MsaA;locus_tag=GCA000560365_01386;product=regulatory protein MsaA;gene=msaA;Parent=GCA000560365_01386_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000269923,COG:COG4699,COG:S,RefSeq:WP_000269923.1,SO:0001217,UniParc:UPI0000054A76,UniRef:UniRef100_Q2FYN0,UniRef:UniRef50_Q2FYN0,UniRef:UniRef90_Q2FYN0
contig_1	Pyrodigal	gene	1444699	1444968	.	+	.	ID=GCA000560365_01387_gene;locus_tag=GCA000560365_01387;gene=acyP
contig_1	Pyrodigal	CDS	1444699	1444968	.	+	0	ID=GCA000560365_01387;Name=acylphosphatase;locus_tag=GCA000560365_01387;product=acylphosphatase;Dbxref=GO:0003998,GO:0008270,GO:0016743,GO:0051604;gene=acyP;Parent=GCA000560365_01387_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1254,RefSeq:WP_001215907.1,SO:0001217,UniParc:UPI00000D7703,UniRef:UniRef100_Q2FYM9,UniRef:UniRef50_Q4L6A9,UniRef:UniRef90_Q2FYM9;ec_number=3.6.1.7
contig_1	Pyrodigal	gene	1444993	1445616	.	+	.	ID=GCA000560365_01388_gene;locus_tag=GCA000560365_01388;gene=xpaC
contig_1	Pyrodigal	CDS	1444993	1445616	.	+	0	ID=GCA000560365_01388;Name=5-bromo-4-chloroindolyl phosphate hydrolase;locus_tag=GCA000560365_01388;product=5-bromo-4-chloroindolyl phosphate hydrolase;gene=xpaC;Parent=GCA000560365_01388_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4915,COG:QR,SO:0001217,UniParc:UPI00000D787B,UniRef:UniRef100_A0A7I0YLW0,UniRef:UniRef50_K9AM25,UniRef:UniRef90_Q2FYM8
contig_1	Pyrodigal	gene	1445648	1446784	.	+	.	ID=GCA000560365_01389_gene;locus_tag=GCA000560365_01389;gene=yaaN
contig_1	Pyrodigal	CDS	1445648	1446784	.	+	0	ID=GCA000560365_01389;Name=TelA-like protein MW1294;locus_tag=GCA000560365_01389;product=TelA-like protein MW1294;gene=yaaN;Parent=GCA000560365_01389_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3853,COG:V,RefSeq:WP_000138413.1,SO:0001217,UniParc:UPI00003B167B,UniRef:UniRef100_Q2FYM7,UniRef:UniRef50_Q49XK7,UniRef:UniRef90_Q2FYM7
contig_1	Pyrodigal	gene	1447052	1447444	.	-	.	ID=GCA000560365_01390_gene;locus_tag=GCA000560365_01390
contig_1	Pyrodigal	CDS	1447052	1447444	.	-	0	ID=GCA000560365_01390;Name=Truncated transposase;locus_tag=GCA000560365_01390;product=Truncated transposase;Parent=GCA000560365_01390_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000054A6E,UniRef:UniRef100_Q2FYM5,UniRef:UniRef50_Q4L350,UniRef:UniRef90_Q2FYM5
contig_1	Infernal	gene	1447481	1447718	.	+	.	ID=GCA000560365_01391_gene;locus_tag=GCA000560365_01391;gene=tsr24
contig_1	Infernal	ncRNA	1447481	1447718	6.6e-41	+	.	ID=GCA000560365_01391;Name=S. aureus tsr24 small RNA;locus_tag=GCA000560365_01391;product=S. aureus tsr24 small RNA;Dbxref=RFAM:RF02577;Parent=GCA000560365_01391_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02577
contig_1	Pyrodigal	gene	1447797	1449140	.	-	.	ID=GCA000560365_01392_gene;locus_tag=GCA000560365_01392;gene=brnQ
contig_1	Pyrodigal	CDS	1447797	1449140	.	-	0	ID=GCA000560365_01392;Name=branched-chain amino acid transport system II carrier protein;locus_tag=GCA000560365_01392;product=branched-chain amino acid transport system II carrier protein;Dbxref=GO:0005304,GO:0005886,GO:0015188,GO:0015190,GO:0015658,GO:0015803,GO:0015818,GO:0015820,GO:0016020;gene=brnQ;Parent=GCA000560365_01392_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1114,COG:E,KEGG:K03311,RefSeq:WP_001039275.1,SO:0001217,UniParc:UPI0000054A6D,UniRef:UniRef100_Q2FYM4,UniRef:UniRef50_Q2FYM4,UniRef:UniRef90_Q2FYM4
contig_1	Pyrodigal	gene	1449365	1451251	.	-	.	ID=GCA000560365_01393_gene;locus_tag=GCA000560365_01393;gene=norD
contig_1	Pyrodigal	CDS	1449365	1451251	.	-	0	ID=GCA000560365_01393;Name=Nitric oxide reductase activation protein NorD;locus_tag=GCA000560365_01393;product=Nitric oxide reductase activation protein NorD;gene=norD;Parent=GCA000560365_01393_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4548,COG:P,RefSeq:WP_001283665.1,SO:0001217,UniParc:UPI0000054A6C,UniRef:UniRef100_Q2G2J9,UniRef:UniRef50_A0A380G8L3,UniRef:UniRef90_A0A5N5IGR7
contig_1	Pyrodigal	gene	1451265	1452056	.	-	.	ID=GCA000560365_01394_gene;locus_tag=GCA000560365_01394;gene=mMP0363
contig_1	Pyrodigal	CDS	1451265	1452056	.	-	0	ID=GCA000560365_01394;Name=putative protein SAOUHSC_01413;locus_tag=GCA000560365_01394;product=putative protein SAOUHSC_01413;Dbxref=GO:0005524,GO:0016887;gene=mMP0363;Parent=GCA000560365_01394_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0714,COG:R,RefSeq:WP_001185424.1,SO:0001217,UniParc:UPI0000696C2D,UniRef:UniRef100_Q2FH29,UniRef:UniRef50_Q49XL1,UniRef:UniRef90_Q2G2J8
contig_1	Pyrodigal	gene	1452237	1452440	.	-	.	ID=GCA000560365_01395_gene;locus_tag=GCA000560365_01395
contig_1	Pyrodigal	CDS	1452237	1452440	.	-	0	ID=GCA000560365_01395;Name=Phage protein;locus_tag=GCA000560365_01395;product=Phage protein;Parent=GCA000560365_01395_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000902175.1,SO:0001217,UniParc:UPI0000054A6A,UniRef:UniRef100_Q2G2J7,UniRef:UniRef50_Q2G2J7,UniRef:UniRef90_Q2G2J7
contig_1	Pyrodigal	gene	1452469	1453278	.	-	.	ID=GCA000560365_01396_gene;locus_tag=GCA000560365_01396
contig_1	Pyrodigal	CDS	1452469	1453278	.	-	0	ID=GCA000560365_01396;Name=VOC domain-containing protein;locus_tag=GCA000560365_01396;product=VOC domain-containing protein;Parent=GCA000560365_01396_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000334518.1,SO:0001217,UniParc:UPI00000D77BF,UniRef:UniRef100_Q2FYM3,UniRef:UniRef50_A0A6N3AGB1,UniRef:UniRef90_Q2FYM3
contig_1	Pyrodigal	gene	1453858	1455126	.	-	.	ID=GCA000560365_01397_gene;locus_tag=GCA000560365_01397;gene=sucB
contig_1	Pyrodigal	CDS	1453858	1455126	.	-	0	ID=GCA000560365_01397;Name=dihydrolipoyllysine-residue succinyltransferase;locus_tag=GCA000560365_01397;product=dihydrolipoyllysine-residue succinyltransferase;Dbxref=GO:0004149,GO:0005829,GO:0006099,GO:0033512,GO:0045252;gene=sucB;Parent=GCA000560365_01397_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0508,RefSeq:WP_031808147.1,SO:0001217,UniParc:UPI0004489282,UniRef:UniRef100_UPI0004489282,UniRef:UniRef50_Q2FYM2,UniRef:UniRef90_Q2FYM2;ec_number=2.3.1.61
contig_1	Pyrodigal	gene	1455140	1457938	.	-	.	ID=GCA000560365_01398_gene;locus_tag=GCA000560365_01398;gene=odhA
contig_1	Pyrodigal	CDS	1455140	1457938	.	-	0	ID=GCA000560365_01398;Name=2-oxoglutarate dehydrogenase E1 component;locus_tag=GCA000560365_01398;product=2-oxoglutarate dehydrogenase E1 component;Dbxref=GO:0004591,GO:0005829,GO:0006096,GO:0006099,GO:0030976,GO:0045252;gene=odhA;Parent=GCA000560365_01398_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0567,RefSeq:WP_000180666.1,SO:0001217,UniParc:UPI0000054A66,UniRef:UniRef100_Q2FYM1,UniRef:UniRef50_P0C601,UniRef:UniRef90_P0C601;ec_number=1.2.4.2
contig_1	Pyrodigal	gene	1458222	1459577	.	-	.	ID=GCA000560365_01399_gene;locus_tag=GCA000560365_01399;gene=arlS
contig_1	Pyrodigal	CDS	1458222	1459577	.	-	0	ID=GCA000560365_01399;Name=sensor histidine kinase ArlS;locus_tag=GCA000560365_01399;product=sensor histidine kinase ArlS;Dbxref=GO:0000155,GO:0005524,GO:0005886;gene=arlS;Parent=GCA000560365_01399_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000166801,COG:COG5002,COG:T,KEGG:K18940,RefSeq:WP_000166801.1,SO:0001217,UniParc:UPI0000054A65,UniRef:UniRef100_Q9KJN3,UniRef:UniRef50_Q9KJN3,UniRef:UniRef90_Q9KJN3;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	1459574	1460233	.	-	.	ID=GCA000560365_01400_gene;locus_tag=GCA000560365_01400;gene=arlR
contig_1	Pyrodigal	CDS	1459574	1460233	.	-	0	ID=GCA000560365_01400;Name=response regulator transcription factor ArlR;locus_tag=GCA000560365_01400;product=response regulator transcription factor ArlR;Dbxref=GO:0000156,GO:0000976,GO:0005829,GO:0006355,GO:0032993;gene=arlR;Parent=GCA000560365_01400_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000192137,KEGG:K18941,RefSeq:WP_000192137.1,SO:0001217,UniParc:UPI000002E8B9,UniRef:UniRef100_Q9KJN4,UniRef:UniRef50_Q9KJN4,UniRef:UniRef90_Q9KJN4
contig_1	Pyrodigal	gene	1460703	1460903	.	-	.	ID=GCA000560365_01401_gene;locus_tag=GCA000560365_01401
contig_1	Pyrodigal	CDS	1460703	1460903	.	-	0	ID=GCA000560365_01401;Name=Transposase;locus_tag=GCA000560365_01401;product=Transposase;Parent=GCA000560365_01401_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000184341.1,SO:0001217,UniParc:UPI00015FD6ED,UniRef:UniRef100_A0A1S5Z3J3,UniRef:UniRef50_Q2FYL7,UniRef:UniRef90_Q2FYL7
contig_1	Infernal	gene	1460826	1461006	.	+	.	ID=GCA000560365_01402_gene;locus_tag=GCA000560365_01402;gene=tsr25
contig_1	Infernal	ncRNA	1460826	1461006	4.2e-37	+	.	ID=GCA000560365_01402;Name=S. aureus tsr25 small RNA;locus_tag=GCA000560365_01402;product=S. aureus tsr25 small RNA;Dbxref=RFAM:RF02578;Parent=GCA000560365_01402_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02578
contig_1	Pyrodigal	gene	1461147	1461632	.	+	.	ID=GCA000560365_01403_gene;locus_tag=GCA000560365_01403;gene=tnp
contig_1	Pyrodigal	CDS	1461147	1461632	.	+	0	ID=GCA000560365_01403;Name=IS200/IS605 family ISSep3 transposase;locus_tag=GCA000560365_01403;product=IS200/IS605 family ISSep3 transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000560365_01403_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1943,COG:X,IS:ISSep3,RefSeq:WP_000093392.1,SO:0001217,UniParc:UPI000005434D,UniRef:UniRef100_Q2G1W3,UniRef:UniRef50_E6LCX5,UniRef:UniRef90_A0AAE2ZW92
contig_1	Pyrodigal	gene	1461763	1462377	.	-	.	ID=GCA000560365_01404_gene;locus_tag=GCA000560365_01404;gene=pgpB
contig_1	Pyrodigal	CDS	1461763	1462377	.	-	0	ID=GCA000560365_01404;Name=Phosphatidic acid phosphatase type 2/haloperoxidase domain-containing protein;locus_tag=GCA000560365_01404;product=Phosphatidic acid phosphatase type 2/haloperoxidase domain-containing protein;gene=pgpB;Parent=GCA000560365_01404_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0671,COG:I,RefSeq:WP_000084780.1,SO:0001217,UniParc:UPI0000054A64,UniRef:UniRef100_Q2FYL6,UniRef:UniRef50_Q2FYL6,UniRef:UniRef90_Q2FYL6
contig_1	Pyrodigal	gene	1462394	1463464	.	-	.	ID=GCA000560365_01405_gene;locus_tag=GCA000560365_01405;gene=murG
contig_1	Pyrodigal	CDS	1462394	1463464	.	-	0	ID=GCA000560365_01405;Name=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;locus_tag=GCA000560365_01405;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;Dbxref=GO:0005886,GO:0005975,GO:0008360,GO:0009252,GO:0030259,GO:0050511,GO:0051301,GO:0051991,GO:0071555;gene=murG;Parent=GCA000560365_01405_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0707,COG:M,KEGG:K02563,RefSeq:WP_000160913.1,SO:0001217,UniParc:UPI0000696C2E,UniRef:UniRef100_Q2FH20,UniRef:UniRef50_Q2FYL5,UniRef:UniRef90_Q2FYL5;ec_number=2.4.1.227
contig_1	Infernal	gene	1462762	1462936	.	+	.	ID=GCA000560365_01406_gene;locus_tag=GCA000560365_01406;gene=S414
contig_1	Infernal	ncRNA	1462762	1462936	4.1e-25	+	.	ID=GCA000560365_01406;Name=Staphylococcus sRNA 414;locus_tag=GCA000560365_01406;product=Staphylococcus sRNA 414;Dbxref=RFAM:RF02895;Parent=GCA000560365_01406_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02895
contig_1	Pyrodigal	gene	1463476	1463985	.	-	.	ID=GCA000560365_01407_gene;locus_tag=GCA000560365_01407;gene=rimL
contig_1	Pyrodigal	CDS	1463476	1463985	.	-	0	ID=GCA000560365_01407;Name=N-acetyltransferase domain-containing protein;locus_tag=GCA000560365_01407;product=N-acetyltransferase domain-containing protein;gene=rimL;Parent=GCA000560365_01407_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1670,COG:JO,RefSeq:WP_000620194.1,SO:0001217,UniParc:UPI00000D77C0,UniRef:UniRef100_Q2FYL4,UniRef:UniRef50_Q2FYL4,UniRef:UniRef90_Q2FYL4
contig_1	Pyrodigal	gene	1464385	1465875	.	-	.	ID=GCA000560365_01408_gene;locus_tag=GCA000560365_01408;gene=ctpA
contig_1	Pyrodigal	CDS	1464385	1465875	.	-	0	ID=GCA000560365_01408;Name=putative CtpA-like serine protease;locus_tag=GCA000560365_01408;product=putative CtpA-like serine protease;Dbxref=GO:0004175,GO:0005886,GO:0006508,GO:0007165,GO:0008236,GO:0030288;gene=ctpA;Parent=GCA000560365_01408_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0793,COG:O,RefSeq:WP_000342125.1,SO:0001217,UniParc:UPI0000054A61,UniRef:UniRef100_Q2FYL3,UniRef:UniRef50_Q4L6D0,UniRef:UniRef90_Q99U67;ec_number=3.4.21.-
contig_1	Pyrodigal	gene	1466067	1466288	.	-	.	ID=GCA000560365_01409_gene;locus_tag=GCA000560365_01409;gene=yozE
contig_1	Pyrodigal	CDS	1466067	1466288	.	-	0	ID=GCA000560365_01409;Name=UPF0346 protein SaurJH9_1481;locus_tag=GCA000560365_01409;product=UPF0346 protein SaurJH9_1481;gene=yozE;Parent=GCA000560365_01409_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4479,COG:S,RefSeq:WP_000801007.1,SO:0001217,UniParc:UPI0000054A60,UniRef:UniRef100_Q2FYL1,UniRef:UniRef50_Q2FYL1,UniRef:UniRef90_Q2FYL1
contig_1	Pyrodigal	gene	1466288	1466788	.	-	.	ID=GCA000560365_01410_gene;locus_tag=GCA000560365_01410;gene=crr
contig_1	Pyrodigal	CDS	1466288	1466788	.	-	0	ID=GCA000560365_01410;Name=PTS system glucose-specific EIIA component;locus_tag=GCA000560365_01410;product=PTS system glucose-specific EIIA component;Dbxref=GO:0005737,GO:0009401,GO:0016301,GO:0046872;gene=crr;Parent=GCA000560365_01410_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2190,COG:G,RefSeq:WP_000473652.1,SO:0001217,UniParc:UPI00000B5951,UniRef:UniRef100_Q5HFZ9,UniRef:UniRef50_Q81JY0,UniRef:UniRef90_P60856
contig_1	Pyrodigal	gene	1466800	1467228	.	-	.	ID=GCA000560365_01411_gene;locus_tag=GCA000560365_01411;gene=msrB
contig_1	Pyrodigal	CDS	1466800	1467228	.	-	0	ID=GCA000560365_01411;Name=Peptide methionine sulfoxide reductase MsrB;locus_tag=GCA000560365_01411;product=Peptide methionine sulfoxide reductase MsrB;Dbxref=GO:0005737,GO:0006979,GO:0030091,GO:0033743;gene=msrB;Parent=GCA000560365_01411_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0229,COG:O,RefSeq:WP_000913315.1,SO:0001217,UniParc:UPI0000054A5E,UniRef:UniRef100_P0A088,UniRef:UniRef50_P0A088,UniRef:UniRef90_P0A088;ec_number=1.8.4.12
contig_1	Pyrodigal	gene	1467221	1467754	.	-	.	ID=GCA000560365_01412_gene;locus_tag=GCA000560365_01412;gene=msrA2
contig_1	Pyrodigal	CDS	1467221	1467754	.	-	0	ID=GCA000560365_01412;Name=Peptide methionine sulfoxide reductase MsrA 2;locus_tag=GCA000560365_01412;product=Peptide methionine sulfoxide reductase MsrA 2;Dbxref=GO:0008113,GO:0033744,GO:0036211;gene=msrA2;Parent=GCA000560365_01412_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000159902.1,SO:0001217,UniParc:UPI0000054A5D,UniRef:UniRef100_P0A086,UniRef:UniRef50_P0A086,UniRef:UniRef90_P0A086;ec_number=1.8.4.11
contig_1	Pyrodigal	gene	1467840	1468679	.	-	.	ID=GCA000560365_01413_gene;locus_tag=GCA000560365_01413;gene=fakB2
contig_1	Pyrodigal	CDS	1467840	1468679	.	-	0	ID=GCA000560365_01413;Name=fatty acid kinase binding subunit FakB2;locus_tag=GCA000560365_01413;product=fatty acid kinase binding subunit FakB2;Dbxref=GO:0008289;gene=fakB2;Parent=GCA000560365_01413_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000166059,COG:COG1307,COG:I,RefSeq:WP_000166059.1,SO:0001217,UniParc:UPI0000054A5C,UniRef:UniRef100_Q8NWR0,UniRef:UniRef50_Q8NWR0,UniRef:UniRef90_Q8NWR0
contig_1	Pyrodigal	gene	1468694	1469173	.	-	.	ID=GCA000560365_01414_gene;locus_tag=GCA000560365_01414;gene=folA
contig_1	Pyrodigal	CDS	1468694	1469173	.	-	0	ID=GCA000560365_01414;Name=Dihydrofolate reductase;locus_tag=GCA000560365_01414;product=Dihydrofolate reductase;Dbxref=GO:0004146,GO:0005829,GO:0006730,GO:0046452,GO:0046654,GO:0046655,GO:0050661;gene=folA;Parent=GCA000560365_01414_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0262,COG:H,KEGG:K00287,RefSeq:WP_000175746.1,SO:0001217,UniParc:UPI0000054A5B,UniRef:UniRef100_Q5HFZ7,UniRef:UniRef50_Q5HFZ7,UniRef:UniRef90_Q5HFZ7;ec_number=1.5.1.3
contig_1	Pyrodigal	gene	1469373	1470329	.	-	.	ID=GCA000560365_01415_gene;locus_tag=GCA000560365_01415;gene=thyA
contig_1	Pyrodigal	CDS	1469373	1470329	.	-	0	ID=GCA000560365_01415;Name=thymidylate synthase;locus_tag=GCA000560365_01415;product=thymidylate synthase;Dbxref=GO:0004799,GO:0005829,GO:0006231,GO:0006235,GO:0032259;gene=thyA;Parent=GCA000560365_01415_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0207,COG:F,KEGG:K00560,RefSeq:WP_000934885.1,SO:0001217,UniParc:UPI00003B168A,UniRef:UniRef100_Q2FYK5,UniRef:UniRef50_P00469,UniRef:UniRef90_P67046;ec_number=2.1.1.45
contig_1	Pyrodigal	gene	1470753	1471190	.	-	.	ID=GCA000560365_01416_gene;locus_tag=GCA000560365_01416
contig_1	Pyrodigal	CDS	1470753	1471190	.	-	0	ID=GCA000560365_01416;Name=Bacilliredoxin SAV1428;locus_tag=GCA000560365_01416;product=Bacilliredoxin SAV1428;Dbxref=GO:0045454;Parent=GCA000560365_01416_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K26958,RefSeq:WP_000995287.1,SO:0001217,UniParc:UPI00000D769E,UniRef:UniRef100_Q2FYK4,UniRef:UniRef50_Q2FYK4,UniRef:UniRef90_Q2FYK4
contig_1	Pyrodigal	gene	1471206	1472330	.	-	.	ID=GCA000560365_01417_gene;locus_tag=GCA000560365_01417;gene=cvfC
contig_1	Pyrodigal	CDS	1471206	1472330	.	-	0	ID=GCA000560365_01417;Name=Conserved virulence factor C;locus_tag=GCA000560365_01417;product=Conserved virulence factor C;Dbxref=GO:0016491;gene=cvfC;Parent=GCA000560365_01417_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000404653.1,SO:0001217,UniParc:UPI0000696C2F,UniRef:UniRef100_Q2FH09,UniRef:UniRef50_Q2FYK3,UniRef:UniRef90_Q2FH09
contig_1	Pyrodigal	gene	1472368	1472619	.	-	.	ID=GCA000560365_01418_gene;locus_tag=GCA000560365_01418
contig_1	Pyrodigal	CDS	1472368	1472619	.	-	0	ID=GCA000560365_01418;Name=Scaffold protein Nfu/NifU N-terminal domain-containing protein;locus_tag=GCA000560365_01418;product=Scaffold protein Nfu/NifU N-terminal domain-containing protein;Parent=GCA000560365_01418_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000691942.1,SO:0001217,UniParc:UPI0000054A56,UniRef:UniRef100_Q2FYK2,UniRef:UniRef50_A0A0U1E823,UniRef:UniRef90_Q2FYK2
contig_1	Pyrodigal	gene	1473070	1473774	.	+	.	ID=GCA000560365_01419_gene;locus_tag=GCA000560365_01419;gene=yhhQ
contig_1	Pyrodigal	CDS	1473070	1473774	.	+	0	ID=GCA000560365_01419;Name=queuosine precursor transporter;locus_tag=GCA000560365_01419;product=queuosine precursor transporter;Dbxref=GO:1990397;gene=yhhQ;Parent=GCA000560365_01419_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1738,COG:J,RefSeq:WP_000282171.1,SO:0001217,UniParc:UPI0000054A52,UniRef:UniRef100_Q2FYK0,UniRef:UniRef50_A0A380CFB3,UniRef:UniRef90_A0A0U1MKY9
contig_1	Infernal	gene	1473795	1474119	.	+	.	ID=GCA000560365_01420_gene;locus_tag=GCA000560365_01420;gene=S35
contig_1	Infernal	ncRNA	1473795	1474119	2.4e-27	+	.	ID=GCA000560365_01420;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000560365_01420;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000560365_01420_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	1473839	1473970	.	-	.	ID=GCA000560365_01421_gene;locus_tag=GCA000560365_01421
contig_1	Pyrodigal	CDS	1473839	1473970	.	-	0	ID=GCA000560365_01421;Name=Nitrogen regulation protein NIFR3;locus_tag=GCA000560365_01421;product=Nitrogen regulation protein NIFR3;Parent=GCA000560365_01421_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000529138.1,SO:0001217,UniParc:UPI00004B5BE9,UniRef:UniRef100_Q2FYJ9,UniRef:UniRef50_Q2FYJ9,UniRef:UniRef90_Q2FYJ9
contig_1	Pyrodigal	gene	1474315	1474716	.	+	.	ID=GCA000560365_01422_gene;locus_tag=GCA000560365_01422;gene=rnhA
contig_1	Pyrodigal	CDS	1474315	1474716	.	+	0	ID=GCA000560365_01422;Name=RNase H type-1 domain-containing protein;locus_tag=GCA000560365_01422;product=RNase H type-1 domain-containing protein;gene=rnhA;Parent=GCA000560365_01422_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0328,COG:L,RefSeq:WP_001062936.1,SO:0001217,UniParc:UPI00004B5BEA,UniRef:UniRef100_Q2FYJ7,UniRef:UniRef50_Q2FYJ7,UniRef:UniRef90_Q2FYJ7
contig_1	Pyrodigal	gene	1474775	1506040	.	-	.	ID=GCA000560365_01423_gene;locus_tag=GCA000560365_01423;gene=ebh
contig_1	Pyrodigal	CDS	1474775	1506040	.	-	0	ID=GCA000560365_01423;Name=Extracellular matrix-binding protein ebh;locus_tag=GCA000560365_01423;product=Extracellular matrix-binding protein ebh;Dbxref=GO:0005886;gene=ebh;Parent=GCA000560365_01423_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001109328.1,SO:0001217,UniParc:UPI00006975D1,UniRef:UniRef100_Q2FH04,UniRef:UniRef50_Q2FYJ6,UniRef:UniRef90_Q2FH04
contig_1	Pyrodigal	gene	1506438	1507829	.	-	.	ID=GCA000560365_01424_gene;locus_tag=GCA000560365_01424;gene=norB
contig_1	Pyrodigal	CDS	1506438	1507829	.	-	0	ID=GCA000560365_01424;Name=multidrug efflux MFS transporter NorB;locus_tag=GCA000560365_01424;product=multidrug efflux MFS transporter NorB;Dbxref=GO:0005886,GO:0022857,GO:0046677;gene=norB;Parent=GCA000560365_01424_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000414682,COG:COG0477,COG:GEPR,KEGG:K08170,RefSeq:WP_000414684.1,SO:0001217,UniParc:UPI00004B5BEB,UniRef:UniRef100_Q5HFY7,UniRef:UniRef50_Q2FYJ5,UniRef:UniRef90_Q2FYJ5
contig_1	Pyrodigal	gene	1507986	1509308	.	-	.	ID=GCA000560365_01425_gene;locus_tag=GCA000560365_01425;gene=potE
contig_1	Pyrodigal	CDS	1507986	1509308	.	-	0	ID=GCA000560365_01425;Name=Amino acid permease;locus_tag=GCA000560365_01425;product=Amino acid permease;gene=potE;Parent=GCA000560365_01425_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0531,COG:E,RefSeq:WP_000064778.1,SO:0001217,UniParc:UPI0000054A4A,UniRef:UniRef100_Q2FYJ4,UniRef:UniRef50_Q2FYJ4,UniRef:UniRef90_Q2FYJ4
contig_1	Pyrodigal	gene	1509339	1510379	.	-	.	ID=GCA000560365_01426_gene;locus_tag=GCA000560365_01426;gene=tdcB
contig_1	Pyrodigal	CDS	1509339	1510379	.	-	0	ID=GCA000560365_01426;Name=bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB;locus_tag=GCA000560365_01426;product=bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB;Dbxref=GO:0000166,GO:0003941,GO:0004794,GO:0006565,GO:0006567,GO:0009097,GO:0030170,GO:0070689;gene=tdcB;Parent=GCA000560365_01426_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1171,COG:E,RefSeq:WP_000210828.1,SO:0001217,UniParc:UPI0000054A49,UniRef:UniRef100_Q2FYJ3,UniRef:UniRef50_P0AGF6,UniRef:UniRef90_Q2FYJ3;ec_number=4.3.1.19
contig_1	Pyrodigal	gene	1510474	1511592	.	-	.	ID=GCA000560365_01427_gene;locus_tag=GCA000560365_01427;gene=ald
contig_1	Pyrodigal	CDS	1510474	1511592	.	-	0	ID=GCA000560365_01427;Name=alanine dehydrogenase;locus_tag=GCA000560365_01427;product=alanine dehydrogenase;Dbxref=GO:0000286,GO:0005886,GO:0042853;gene=ald;Parent=GCA000560365_01427_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0686,COG:E,KEGG:K00259,RefSeq:WP_000959424.1,SO:0001217,UniParc:UPI00000CAD0F,UniRef:UniRef100_Q2FH00,UniRef:UniRef50_Q2FYJ2,UniRef:UniRef90_Q2FYJ2;ec_number=1.4.1.1
contig_1	Pyrodigal	gene	1512067	1512945	.	-	.	ID=GCA000560365_01428_gene;locus_tag=GCA000560365_01428;gene=exoIX
contig_1	Pyrodigal	CDS	1512067	1512945	.	-	0	ID=GCA000560365_01428;Name=5'-3' exonuclease;locus_tag=GCA000560365_01428;product=5'-3' exonuclease;gene=exoIX;Parent=GCA000560365_01428_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0258,COG:L,RefSeq:WP_001133011.1,SO:0001217,UniParc:UPI0000054A47,UniRef:UniRef100_Q2FYJ1,UniRef:UniRef50_A0A380G7N4,UniRef:UniRef90_A0A641AB36
contig_1	Pyrodigal	gene	1512965	1516405	.	-	.	ID=GCA000560365_01429_gene;locus_tag=GCA000560365_01429;gene=era
contig_1	Pyrodigal	CDS	1512965	1516405	.	-	0	ID=GCA000560365_01429;Name=Dynamin N-terminal domain-containing protein;locus_tag=GCA000560365_01429;product=Dynamin N-terminal domain-containing protein;gene=era;Parent=GCA000560365_01429_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1159,COG:J,RefSeq:WP_000608523.1,SO:0001217,UniParc:UPI0000696C31,UniRef:UniRef100_A0A5A8VQ89,UniRef:UniRef50_K9B117,UniRef:UniRef90_Q2FYJ0
contig_1	Pyrodigal	gene	1516709	1518049	.	+	.	ID=GCA000560365_01430_gene;locus_tag=GCA000560365_01430;gene=piuB
contig_1	Pyrodigal	CDS	1516709	1518049	.	+	0	ID=GCA000560365_01430;Name=PepSY domain-containing protein;locus_tag=GCA000560365_01430;product=PepSY domain-containing protein;gene=piuB;Parent=GCA000560365_01430_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3182,COG:P,RefSeq:WP_000798979.1,SO:0001217,UniParc:UPI0000696C32,UniRef:UniRef100_A0A1S6CPW2,UniRef:UniRef50_Q2FYI9,UniRef:UniRef90_Q2FYI9
contig_1	Pyrodigal	gene	1518255	1518587	.	-	.	ID=GCA000560365_01431_gene;locus_tag=GCA000560365_01431
contig_1	Pyrodigal	CDS	1518255	1518587	.	-	0	ID=GCA000560365_01431;Name=DUF4889 domain-containing protein;locus_tag=GCA000560365_01431;product=DUF4889 domain-containing protein;Parent=GCA000560365_01431_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000516800.1,SO:0001217,UniParc:UPI0000054A43,UniRef:UniRef100_Q2FYI7,UniRef:UniRef50_Q2FYI7,UniRef:UniRef90_Q2FYI7
contig_1	Pyrodigal	gene	1518671	1519816	.	-	.	ID=GCA000560365_01432_gene;locus_tag=GCA000560365_01432;gene=rlmL
contig_1	Pyrodigal	CDS	1518671	1519816	.	-	0	ID=GCA000560365_01432;Name=THUMP domain-containing protein;locus_tag=GCA000560365_01432;product=THUMP domain-containing protein;gene=rlmL;Parent=GCA000560365_01432_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0116,COG:J,RefSeq:WP_000487150.1,SO:0001217,UniParc:UPI0000054A42,UniRef:UniRef100_Q2FYI6,UniRef:UniRef50_P50840,UniRef:UniRef90_Q2FYI6
contig_1	Infernal	gene	1520025	1520404	.	-	.	ID=GCA000560365_01433_gene;locus_tag=GCA000560365_01433;gene=RNaseP_bact_b
contig_1	Infernal	ncRNA	1520025	1520404	1.2e-35	-	.	ID=GCA000560365_01433;Name=Bacterial RNase P class B;locus_tag=GCA000560365_01433;product=Bacterial RNase P class B;Dbxref=RFAM:RF00011;Parent=GCA000560365_01433_gene;Note=SO:0000386;ncRNA_class=RNase_P_RNA;inference=profile:Rfam:RF00011
contig_1	Pyrodigal	gene	1520250	1520366	.	-	.	ID=GCA000560365_01434_gene;locus_tag=GCA000560365_01434
contig_1	Pyrodigal	CDS	1520250	1520366	.	-	0	ID=GCA000560365_01434;Name=hypothetical protein;locus_tag=GCA000560365_01434;product=hypothetical protein;Parent=GCA000560365_01434_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D78B8,UniRef:UniRef100_A0A0M5N980,UniRef:UniRef50_A0A0M5N980,UniRef:UniRef90_A0A0M5N980
contig_1	Pyrodigal	gene	1520467	1520811	.	-	.	ID=GCA000560365_01435_gene;locus_tag=GCA000560365_01435;gene=gpsB
contig_1	Pyrodigal	CDS	1520467	1520811	.	-	0	ID=GCA000560365_01435;Name=cell division regulator GpsB;locus_tag=GCA000560365_01435;product=cell division regulator GpsB;Dbxref=GO:0005737,GO:0008360,GO:0051301;gene=gpsB;Parent=GCA000560365_01435_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3599,COG:D,RefSeq:WP_001286320.1,SO:0001217,UniParc:UPI0000054A3F,UniRef:UniRef100_Q2FYI5,UniRef:UniRef50_Q2FYI5,UniRef:UniRef90_Q2FYI5
contig_1	Pyrodigal	gene	1520825	1521388	.	-	.	ID=GCA000560365_01436_gene;locus_tag=GCA000560365_01436;gene=yoqJ
contig_1	Pyrodigal	CDS	1520825	1521388	.	-	0	ID=GCA000560365_01436;Name=UPF0398 protein SaurJH1_1535;locus_tag=GCA000560365_01436;product=UPF0398 protein SaurJH1_1535;gene=yoqJ;Parent=GCA000560365_01436_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4474,COG:X,RefSeq:WP_000241308.1,SO:0001217,UniParc:UPI00000D78A2,UniRef:UniRef100_Q2FYI4,UniRef:UniRef50_Q2FYI4,UniRef:UniRef90_Q2FYI4
contig_1	Pyrodigal	gene	1521381	1521782	.	-	.	ID=GCA000560365_01437_gene;locus_tag=GCA000560365_01437
contig_1	Pyrodigal	CDS	1521381	1521782	.	-	0	ID=GCA000560365_01437;Name=DUF1798 domain-containing protein;locus_tag=GCA000560365_01437;product=DUF1798 domain-containing protein;Parent=GCA000560365_01437_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000054C52,UniRef:UniRef100_Q2FYI3,UniRef:UniRef50_Q2FYI3,UniRef:UniRef90_Q2FYI3
contig_1	Pyrodigal	gene	1522271	1522897	.	+	.	ID=GCA000560365_01438_gene;locus_tag=GCA000560365_01438;gene=recU
contig_1	Pyrodigal	CDS	1522271	1522897	.	+	0	ID=GCA000560365_01438;Name=Holliday junction resolvase RecU;locus_tag=GCA000560365_01438;product=Holliday junction resolvase RecU;Dbxref=GO:0000287,GO:0003676,GO:0004519,GO:0005737,GO:0006281,GO:0006310,GO:0007059;gene=recU;Parent=GCA000560365_01438_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3331,COG:R,RefSeq:WP_001108889.1,SO:0001217,UniParc:UPI00000009F1,UniRef:UniRef100_Q2FGZ1,UniRef:UniRef50_Q8GN53,UniRef:UniRef90_Q8GN53;ec_number=3.1.21.10
contig_1	Pyrodigal	gene	1522894	1525077	.	+	.	ID=GCA000560365_01439_gene;locus_tag=GCA000560365_01439;gene=mrcB
contig_1	Pyrodigal	CDS	1522894	1525077	.	+	0	ID=GCA000560365_01439;Name=peptidoglycan glycosyltransferase;locus_tag=GCA000560365_01439;product=peptidoglycan glycosyltransferase;gene=mrcB;Parent=GCA000560365_01439_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0744,COG:M,RefSeq:WP_000138351.1,SO:0001217,UniParc:UPI0000054C56,UniRef:UniRef100_Q2FYI0,UniRef:UniRef50_F4NA87,UniRef:UniRef90_F4NA87
contig_1	Pyrodigal	gene	1525643	1525984	.	-	.	ID=GCA000560365_01440_gene;locus_tag=GCA000560365_01440
contig_1	Pyrodigal	CDS	1525643	1525984	.	-	0	ID=GCA000560365_01440;Name=YpoC-like domain-containing protein;locus_tag=GCA000560365_01440;product=YpoC-like domain-containing protein;Parent=GCA000560365_01440_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000182019.1,SO:0001217,UniParc:UPI0000054C57,UniRef:UniRef100_Q2FYH9,UniRef:UniRef50_A0A143PAF6,UniRef:UniRef90_Q2FYH9
contig_1	Pyrodigal	gene	1525989	1526648	.	-	.	ID=GCA000560365_01441_gene;locus_tag=GCA000560365_01441;gene=nth
contig_1	Pyrodigal	CDS	1525989	1526648	.	-	0	ID=GCA000560365_01441;Name=endonuclease III;locus_tag=GCA000560365_01441;product=endonuclease III;Dbxref=GO:0006281,GO:0140078;gene=nth;Parent=GCA000560365_01441_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0177,COG:L,RefSeq:WP_000253765.1,SO:0001217,UniParc:UPI00000D7789,UniRef:UniRef100_Q2FYH8,UniRef:UniRef50_A0A024P153,UniRef:UniRef90_A0A7X9ZHC0;ec_number=4.2.99.18
contig_1	Pyrodigal	gene	1526638	1527324	.	-	.	ID=GCA000560365_01442_gene;locus_tag=GCA000560365_01442;gene=dnaD
contig_1	Pyrodigal	CDS	1526638	1527324	.	-	0	ID=GCA000560365_01442;Name=Chromosome replication initiation protein dnaD;locus_tag=GCA000560365_01442;product=Chromosome replication initiation protein dnaD;gene=dnaD;Parent=GCA000560365_01442_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3935,COG:L,RefSeq:WP_000362212.1,SO:0001217,UniParc:UPI0000054C59,UniRef:UniRef100_Q2FYH7,UniRef:UniRef50_A0A2T4RL44,UniRef:UniRef90_A0A2W2X8C3
contig_1	Pyrodigal	gene	1527652	1528944	.	-	.	ID=GCA000560365_01443_gene;locus_tag=GCA000560365_01443;gene=asnS
contig_1	Pyrodigal	CDS	1527652	1528944	.	-	0	ID=GCA000560365_01443;Name=asparagine--tRNA ligase;locus_tag=GCA000560365_01443;product=asparagine--tRNA ligase;Dbxref=GO:0003676,GO:0004816,GO:0005524,GO:0005737,GO:0006421,GO:0016740;gene=asnS;Parent=GCA000560365_01443_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0017,COG:J,KEGG:K01893,RefSeq:WP_000858789.1,SO:0001217,UniParc:UPI00004B5BF1,UniRef:UniRef100_Q2FYH6,UniRef:UniRef50_P54262,UniRef:UniRef90_Q2FYH6;ec_number=6.1.1.22
contig_1	Pyrodigal	gene	1529266	1531959	.	-	.	ID=GCA000560365_01444_gene;locus_tag=GCA000560365_01444;gene=dinG
contig_1	Pyrodigal	CDS	1529266	1531959	.	-	0	ID=GCA000560365_01444;Name=3'-5' exonuclease DinG;locus_tag=GCA000560365_01444;product=3'-5' exonuclease DinG;Dbxref=GO:0003677,GO:0003887,GO:0004386,GO:0005524,GO:0005829,GO:0008408,GO:0016818,GO:0045004;gene=dinG;Parent=GCA000560365_01444_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2176,COG:L,KEGG:K03722,RefSeq:WP_031808148.1,SO:0001217,UniParc:UPI000447A3DD,UniRef:UniRef100_UPI000447A3DD,UniRef:UniRef50_Q6GGV4,UniRef:UniRef90_Q6GGV4;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	1531983	1532954	.	-	.	ID=GCA000560365_01445_gene;locus_tag=GCA000560365_01445;gene=birA
contig_1	Pyrodigal	CDS	1531983	1532954	.	-	0	ID=GCA000560365_01445;Name=Bifunctional ligase/repressor BirA;locus_tag=GCA000560365_01445;product=Bifunctional ligase/repressor BirA;gene=birA;Parent=GCA000560365_01445_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1654,COG:K,KEGG:K03524,RefSeq:WP_000049919.1,SO:0001217,UniParc:UPI00004B5BF2,UniRef:UniRef100_A0A0E7NXW5,UniRef:UniRef50_A0A2K4AIL1,UniRef:UniRef90_A0A2K4AIL1;ec_number=6.3.4.15
contig_1	Pyrodigal	gene	1532941	1534143	.	-	.	ID=GCA000560365_01446_gene;locus_tag=GCA000560365_01446;gene=cca
contig_1	Pyrodigal	CDS	1532941	1534143	.	-	0	ID=GCA000560365_01446;Name=CCA tRNA nucleotidyltransferase;locus_tag=GCA000560365_01446;product=CCA tRNA nucleotidyltransferase;Dbxref=GO:0000049,GO:0000287,GO:0001680,GO:0005524,GO:0016779,GO:0042245,GO:0160016;gene=cca;Parent=GCA000560365_01446_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0617,COG:J,RefSeq:WP_000361544.1,SO:0001217,UniParc:UPI00004B5BF3,UniRef:UniRef100_Q5HFW6,UniRef:UniRef50_Q49XR3,UniRef:UniRef90_Q99U32;ec_number=2.7.7.72
contig_1	Pyrodigal	gene	1534148	1535290	.	-	.	ID=GCA000560365_01447_gene;locus_tag=GCA000560365_01447;gene=bshA
contig_1	Pyrodigal	CDS	1534148	1535290	.	-	0	ID=GCA000560365_01447;Name=N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA;locus_tag=GCA000560365_01447;product=N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA;Dbxref=GO:0016757,GO:0071793;gene=bshA;Parent=GCA000560365_01447_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0438,COG:M,RefSeq:WP_000690027.1,SO:0001217,UniParc:UPI0000696C34,UniRef:UniRef100_Q2G255,UniRef:UniRef50_P42982,UniRef:UniRef90_Q2G255
contig_1	Pyrodigal	gene	1535531	1535848	.	-	.	ID=GCA000560365_01448_gene;locus_tag=GCA000560365_01448;gene=mazG
contig_1	Pyrodigal	CDS	1535531	1535848	.	-	0	ID=GCA000560365_01448;Name=NTP pyrophosphohydrolase MazG-like domain-containing protein;locus_tag=GCA000560365_01448;product=NTP pyrophosphohydrolase MazG-like domain-containing protein;gene=mazG;Parent=GCA000560365_01448_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1694,COG:V,RefSeq:WP_000839926.1,SO:0001217,UniParc:UPI0000054C60,UniRef:UniRef100_Q2G254,UniRef:UniRef50_K8ZP05,UniRef:UniRef90_Q2G254
contig_1	Pyrodigal	gene	1536185	1536883	.	-	.	ID=GCA000560365_01449_gene;locus_tag=GCA000560365_01449;gene=yugP
contig_1	Pyrodigal	CDS	1536185	1536883	.	-	0	ID=GCA000560365_01449;Name=Putative membrane protease YugP;locus_tag=GCA000560365_01449;product=Putative membrane protease YugP;gene=yugP;Parent=GCA000560365_01449_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2738,COG:O,KEGG:K06973,SO:0001217,UniParc:UPI00000CAC92,UniRef:UniRef100_A0A7Z7W209,UniRef:UniRef50_A0A7U7PY90,UniRef:UniRef90_A0A7U7PY90
contig_1	Pyrodigal	gene	1536937	1537524	.	-	.	ID=GCA000560365_01450_gene;locus_tag=GCA000560365_01450;gene=ypjA
contig_1	Pyrodigal	CDS	1536937	1537524	.	-	0	ID=GCA000560365_01450;Name=DUF1405 domain-containing protein;locus_tag=GCA000560365_01450;product=DUF1405 domain-containing protein;gene=ypjA;Parent=GCA000560365_01450_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4347,COG:S,RefSeq:WP_000152734.1,SO:0001217,UniParc:UPI0000054C62,UniRef:UniRef100_Q2FYH4,UniRef:UniRef50_Q2FYH4,UniRef:UniRef90_Q2FYH4
contig_1	Pyrodigal	gene	1537514	1538101	.	-	.	ID=GCA000560365_01451_gene;locus_tag=GCA000560365_01451;gene=ypiB
contig_1	Pyrodigal	CDS	1537514	1538101	.	-	0	ID=GCA000560365_01451;Name=UPF0302 protein SA1295;locus_tag=GCA000560365_01451;product=UPF0302 protein SA1295;gene=ypiB;Parent=GCA000560365_01451_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5582,COG:S,SO:0001217,UniParc:UPI0002CC314F,UniRef:UniRef100_Q2FGX8,UniRef:UniRef50_Q2FYH3,UniRef:UniRef90_Q2FYH3
contig_1	Pyrodigal	gene	1538103	1539347	.	-	.	ID=GCA000560365_01452_gene;locus_tag=GCA000560365_01452;gene=tadD
contig_1	Pyrodigal	CDS	1538103	1539347	.	-	0	ID=GCA000560365_01452;Name=Tetratricopeptide repeat protein;locus_tag=GCA000560365_01452;product=Tetratricopeptide repeat protein;gene=tadD;Parent=GCA000560365_01452_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5010,COG:W,RefSeq:WP_000389524.1,SO:0001217,UniParc:UPI0000054C64,UniRef:UniRef100_Q2FYH2,UniRef:UniRef50_Q49XR9,UniRef:UniRef90_A0AA40JLE9
contig_1	Pyrodigal	gene	1539354	1540652	.	-	.	ID=GCA000560365_01453_gene;locus_tag=GCA000560365_01453;gene=aroA
contig_1	Pyrodigal	CDS	1539354	1540652	.	-	0	ID=GCA000560365_01453;Name=3-phosphoshikimate 1-carboxyvinyltransferase;locus_tag=GCA000560365_01453;product=3-phosphoshikimate 1-carboxyvinyltransferase;Dbxref=GO:0003866,GO:0005737,GO:0008652,GO:0009073,GO:0009423;gene=aroA;Parent=GCA000560365_01453_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0128,COG:E,RefSeq:WP_000245895.1,SO:0001217,UniParc:UPI0000125F53,UniRef:UniRef100_Q05615,UniRef:UniRef50_Q05615,UniRef:UniRef90_Q05615;ec_number=2.5.1.19
contig_1	Pyrodigal	gene	1540662	1541726	.	-	.	ID=GCA000560365_01454_gene;locus_tag=GCA000560365_01454;gene=aroB
contig_1	Pyrodigal	CDS	1540662	1541726	.	-	0	ID=GCA000560365_01454;Name=3-dehydroquinate synthase;locus_tag=GCA000560365_01454;product=3-dehydroquinate synthase;Dbxref=GO:0000166,GO:0003856,GO:0005737,GO:0008652,GO:0009073,GO:0009423,GO:0046872;gene=aroB;Parent=GCA000560365_01454_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0337,COG:E,KEGG:K01735,RefSeq:WP_000776323.1,SO:0001217,UniParc:UPI00004B5BF8,UniRef:UniRef100_Q2FGX5,UniRef:UniRef50_Q6GGU4,UniRef:UniRef90_Q6GGU4;ec_number=4.2.3.4
contig_1	Pyrodigal	gene	1541752	1542918	.	-	.	ID=GCA000560365_01455_gene;locus_tag=GCA000560365_01455;gene=aroC
contig_1	Pyrodigal	CDS	1541752	1542918	.	-	0	ID=GCA000560365_01455;Name=chorismate synthase;locus_tag=GCA000560365_01455;product=chorismate synthase;Dbxref=GO:0004107,GO:0005829,GO:0008652,GO:0009073,GO:0009423,GO:0010181;gene=aroC;Parent=GCA000560365_01455_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0082,COG:E,KEGG:K01736,RefSeq:WP_001269929.1,SO:0001217,UniParc:UPI00004B5BF9,UniRef:UniRef100_Q2FYG9,UniRef:UniRef50_Q59803,UniRef:UniRef90_Q59803;ec_number=4.2.3.5
contig_1	Pyrodigal	gene	1543304	1543504	.	-	.	ID=GCA000560365_01456_gene;locus_tag=GCA000560365_01456
contig_1	Pyrodigal	CDS	1543304	1543504	.	-	0	ID=GCA000560365_01456;Name=hypothetical protein;locus_tag=GCA000560365_01456;product=hypothetical protein;Parent=GCA000560365_01456_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000789522.1,SO:0001217,UniParc:UPI0000054C68,UniRef:UniRef100_Q2FYG8,UniRef:UniRef50_Q2FYG8,UniRef:UniRef90_Q2FYG8
contig_1	Pyrodigal	gene	1543713	1544162	.	-	.	ID=GCA000560365_01457_gene;locus_tag=GCA000560365_01457;gene=ndk
contig_1	Pyrodigal	CDS	1543713	1544162	.	-	0	ID=GCA000560365_01457;Name=nucleoside-diphosphate kinase;locus_tag=GCA000560365_01457;product=nucleoside-diphosphate kinase;Dbxref=GO:0004550,GO:0005524,GO:0005737,GO:0006183,GO:0006228,GO:0006241,GO:0046872;gene=ndk;Parent=GCA000560365_01457_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0105,COG:F,RefSeq:WP_000442480.1,SO:0001217,UniParc:UPI000012FEC6,UniRef:UniRef100_Q2FYG7,UniRef:UniRef50_Q2FYG7,UniRef:UniRef90_Q2FYG7;ec_number=2.7.4.6
contig_1	Pyrodigal	gene	1544254	1545213	.	-	.	ID=GCA000560365_01458_gene;locus_tag=GCA000560365_01458;gene=ispA
contig_1	Pyrodigal	CDS	1544254	1545213	.	-	0	ID=GCA000560365_01458;Name=Farnesyl pyrophosphate synthetase;locus_tag=GCA000560365_01458;product=Farnesyl pyrophosphate synthetase;gene=ispA;Parent=GCA000560365_01458_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0142,COG:H,KEGG:K24873,RefSeq:WP_001096471.1,SO:0001217,UniParc:UPI00000CABC5,UniRef:UniRef100_A0A0D6HKK2,UniRef:UniRef50_A0A0D6HKK2,UniRef:UniRef90_A0A0D6HKK2;ec_number=2.5.1.30
contig_1	Pyrodigal	gene	1545215	1545940	.	-	.	ID=GCA000560365_01459_gene;locus_tag=GCA000560365_01459;gene=menG
contig_1	Pyrodigal	CDS	1545215	1545940	.	-	0	ID=GCA000560365_01459;Name=demethylmenaquinone methyltransferase;locus_tag=GCA000560365_01459;product=demethylmenaquinone methyltransferase;Dbxref=GO:0008168,GO:0009234,GO:0032259,GO:0043770;gene=menG;Parent=GCA000560365_01459_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2226,COG:HJ,RefSeq:WP_000774684.1,SO:0001217,UniParc:UPI0000054C6C,UniRef:UniRef100_Q5HFV2,UniRef:UniRef50_P31113,UniRef:UniRef90_Q6GGU0;ec_number=2.1.1.163
contig_1	Pyrodigal	gene	1545943	1546515	.	-	.	ID=GCA000560365_01460_gene;locus_tag=GCA000560365_01460
contig_1	Pyrodigal	CDS	1545943	1546515	.	-	0	ID=GCA000560365_01460;Name=Heptaprenyl pyrophosphate synthase subunit A;locus_tag=GCA000560365_01460;product=Heptaprenyl pyrophosphate synthase subunit A;Parent=GCA000560365_01460_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00805,RefSeq:WP_000450553.1,SO:0001217,UniParc:UPI0000054C6D,UniRef:UniRef100_Q2FYG4,UniRef:UniRef50_Q2FYG4,UniRef:UniRef90_Q2FYG4;ec_number=2.5.1.30
contig_1	Pyrodigal	gene	1546946	1547218	.	-	.	ID=GCA000560365_01461_gene;locus_tag=GCA000560365_01461;gene=hup
contig_1	Pyrodigal	CDS	1546946	1547218	.	-	0	ID=GCA000560365_01461;Name=DNA-binding protein HU;locus_tag=GCA000560365_01461;product=DNA-binding protein HU;Dbxref=GO:0003677,GO:0005829,GO:0030261,GO:0030527;gene=hup;Parent=GCA000560365_01461_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:B,COG:COG0776,RefSeq:WP_001043863.1,SO:0001217,UniParc:UPI0000054C6E,UniRef:UniRef100_Q5HFV0,UniRef:UniRef50_P0A3H3,UniRef:UniRef90_Q5HFV0
contig_1	Pyrodigal	gene	1547389	1548387	.	-	.	ID=GCA000560365_01462_gene;locus_tag=GCA000560365_01462;gene=gpsA
contig_1	Pyrodigal	CDS	1547389	1548387	.	-	0	ID=GCA000560365_01462;Name=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;locus_tag=GCA000560365_01462;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;Dbxref=GO:0005829,GO:0005975,GO:0006650,GO:0008654,GO:0009331,GO:0046167,GO:0046168,GO:0047952,GO:0051287;gene=gpsA;Parent=GCA000560365_01462_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0240,RefSeq:WP_000161738.1,SO:0001217,UniParc:UPI0000054C6F,UniRef:UniRef100_Q2FYG1,UniRef:UniRef50_Q5XE03,UniRef:UniRef90_Q2FYG1;ec_number=1.1.1.94
contig_1	Pyrodigal	gene	1548404	1549714	.	-	.	ID=GCA000560365_01463_gene;locus_tag=GCA000560365_01463;gene=der
contig_1	Pyrodigal	CDS	1548404	1549714	.	-	0	ID=GCA000560365_01463;Name=ribosome biogenesis GTPase Der;locus_tag=GCA000560365_01463;product=ribosome biogenesis GTPase Der;Dbxref=GO:0003924,GO:0005525,GO:0005737,GO:0042254,GO:0043022;gene=der;Parent=GCA000560365_01463_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1160,COG:J,KEGG:K03977,RefSeq:WP_000165536.1,SO:0001217,UniParc:UPI0000696C3A,UniRef:UniRef100_Q2FGW7,UniRef:UniRef50_P50743,UniRef:UniRef90_Q2FYG0;ec_number=3.6.5.-
contig_1	Pyrodigal	gene	1549936	1551111	.	-	.	ID=GCA000560365_01464_gene;locus_tag=GCA000560365_01464;gene=rpsA
contig_1	Pyrodigal	CDS	1549936	1551111	.	-	0	ID=GCA000560365_01464;Name=30S ribosomal protein S1;locus_tag=GCA000560365_01464;product=30S ribosomal protein S1;Dbxref=GO:0003676,GO:0003729,GO:0003735,GO:0006412,GO:0022627;gene=rpsA;Parent=GCA000560365_01464_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0539,COG:J,RefSeq:WP_000133954.1,SO:0001217,UniParc:UPI000004801E,UniRef:UniRef100_Q5HFU7,UniRef:UniRef50_Q49XT0,UniRef:UniRef90_Q6GGT5
contig_1	Pyrodigal	gene	1551823	1552482	.	-	.	ID=GCA000560365_01465_gene;locus_tag=GCA000560365_01465;gene=cmk
contig_1	Pyrodigal	CDS	1551823	1552482	.	-	0	ID=GCA000560365_01465;Name=(d)CMP kinase;locus_tag=GCA000560365_01465;product=(d)CMP kinase;Dbxref=GO:0004127,GO:0005524,GO:0005829,GO:0006220,GO:0015949,GO:0036430,GO:0036431;gene=cmk;Parent=GCA000560365_01465_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0283,COG:F,RefSeq:WP_000644391.1,SO:0001217,UniParc:UPI0000054C73,UniRef:UniRef100_Q5HFU6,UniRef:UniRef50_B9DNU7,UniRef:UniRef90_Q6GGT4;ec_number=2.7.4.25
contig_1	Pyrodigal	gene	1552559	1553527	.	+	.	ID=GCA000560365_01466_gene;locus_tag=GCA000560365_01466;gene=ansA
contig_1	Pyrodigal	CDS	1552559	1553527	.	+	0	ID=GCA000560365_01466;Name=Alpha/beta hydrolase fold-3 domain-containing protein;locus_tag=GCA000560365_01466;product=Alpha/beta hydrolase fold-3 domain-containing protein;gene=ansA;Parent=GCA000560365_01466_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0252,COG:JE,RefSeq:WP_000681756.1,SO:0001217,UniParc:UPI00000541D7,UniRef:UniRef100_Q2FYF4,UniRef:UniRef50_K8E262,UniRef:UniRef90_A0A391A6D3
contig_1	Pyrodigal	gene	1553642	1554628	.	-	.	ID=GCA000560365_01467_gene;locus_tag=GCA000560365_01467;gene=trxB
contig_1	Pyrodigal	CDS	1553642	1554628	.	-	0	ID=GCA000560365_01467;Name=FAD-binding protein;locus_tag=GCA000560365_01467;product=FAD-binding protein;gene=trxB;Parent=GCA000560365_01467_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0492,COG:O,KEGG:K26960,RefSeq:WP_001174260.1,SO:0001217,UniParc:UPI00000D9E08,UniRef:UniRef100_Q2FYF3,UniRef:UniRef50_A0A380G2E5,UniRef:UniRef90_A0A2K4AII5;ec_number=1.8.1.-
contig_1	Pyrodigal	gene	1555030	1556490	.	-	.	ID=GCA000560365_01468_gene;locus_tag=GCA000560365_01468;gene=ebp
contig_1	Pyrodigal	CDS	1555030	1556490	.	-	0	ID=GCA000560365_01468;Name=cell surface elastin binding protein;locus_tag=GCA000560365_01468;product=cell surface elastin binding protein;Dbxref=GO:0005886;gene=ebp;Parent=GCA000560365_01468_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000069282.1,SO:0001217,UniParc:UPI00000B839A,UniRef:UniRef100_Q2FYF1,UniRef:UniRef50_Q2FYF1,UniRef:UniRef90_Q2FYF1,VFDB:VFC0001,VFDB:VFG001278
contig_1	Pyrodigal	gene	1556643	1558022	.	-	.	ID=GCA000560365_01469_gene;locus_tag=GCA000560365_01469;gene=recQ
contig_1	Pyrodigal	CDS	1556643	1558022	.	-	0	ID=GCA000560365_01469;Name=ATP-dependent DNA helicase;locus_tag=GCA000560365_01469;product=ATP-dependent DNA helicase;gene=recQ;Parent=GCA000560365_01469_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0514,COG:L,RefSeq:WP_000902119.1,SO:0001217,UniParc:UPI00000541DB,UniRef:UniRef100_Q2FYF0,UniRef:UniRef50_A0A380G6G1,UniRef:UniRef90_A0A390B2J9
contig_1	Pyrodigal	gene	1558012	1558965	.	-	.	ID=GCA000560365_01470_gene;locus_tag=GCA000560365_01470;gene=ypbB
contig_1	Pyrodigal	CDS	1558012	1558965	.	-	0	ID=GCA000560365_01470;Name=Helicase Helix-turn-helix domain-containing protein;locus_tag=GCA000560365_01470;product=Helicase Helix-turn-helix domain-containing protein;gene=ypbB;Parent=GCA000560365_01470_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4955,COG:S,RefSeq:WP_001163801.1,SO:0001217,UniParc:UPI00000D785B,UniRef:UniRef100_Q2FYE9,UniRef:UniRef50_Q2FYE9,UniRef:UniRef90_Q2FYE9
contig_1	Pyrodigal	gene	1559073	1559321	.	+	.	ID=GCA000560365_01471_gene;locus_tag=GCA000560365_01471;gene=fer
contig_1	Pyrodigal	CDS	1559073	1559321	.	+	0	ID=GCA000560365_01471;Name=Ferredoxin;locus_tag=GCA000560365_01471;product=Ferredoxin;gene=fer;Parent=GCA000560365_01471_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1141,RefSeq:WP_001151997.1,SO:0001217,UniParc:UPI00000D7814,UniRef:UniRef100_A0A7Z7QYV2,UniRef:UniRef50_P50727,UniRef:UniRef90_D3G002
contig_1	Pyrodigal	gene	1559427	1559972	.	-	.	ID=GCA000560365_01472_gene;locus_tag=GCA000560365_01472;gene=ribU
contig_1	Pyrodigal	CDS	1559427	1559972	.	-	0	ID=GCA000560365_01472;Name=Riboflavin transporter RibU;locus_tag=GCA000560365_01472;product=Riboflavin transporter RibU;Dbxref=GO:0005886,GO:0032217;gene=ribU;Parent=GCA000560365_01472_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3601,COG:H,KEGG:K23675,RefSeq:WP_001186912.1,SO:0001217,UniParc:UPI00000D76F1,UniRef:UniRef100_Q2FYE7,UniRef:UniRef50_E5QVT2,UniRef:UniRef90_E5QVT2
contig_1	Infernal	regulatory_region	1560034	1560168	2e-20	-	.	ID=KMHODOBJJH_168;Name=FMN riboswitch aptamer (RFN element);product=FMN riboswitch aptamer (RFN element);Dbxref=RFAM:RF00050;inference=profile:Rfam:RF00050;Note=SO:0000035;regulatory_class=riboswitch
contig_1	Pyrodigal	gene	1560569	1561483	.	-	.	ID=GCA000560365_01473_gene;locus_tag=GCA000560365_01473
contig_1	Pyrodigal	CDS	1560569	1561483	.	-	0	ID=GCA000560365_01473;Name=DUF1672 domain-containing protein;locus_tag=GCA000560365_01473;product=DUF1672 domain-containing protein;Parent=GCA000560365_01473_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000913219.1,SO:0001217,UniParc:UPI00000541E1,UniRef:UniRef100_Q2FYE5,UniRef:UniRef50_Q2FYE5,UniRef:UniRef90_Q2FYE5
contig_1	Pyrodigal	gene	1561498	1561704	.	-	.	ID=GCA000560365_01474_gene;locus_tag=GCA000560365_01474
contig_1	Pyrodigal	CDS	1561498	1561704	.	-	0	ID=GCA000560365_01474;Name=hypothetical protein;locus_tag=GCA000560365_01474;product=hypothetical protein;Parent=GCA000560365_01474_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001033757.1,SO:0001217,UniParc:UPI00004B5BFB,UniRef:UniRef100_Q2FYE4,UniRef:UniRef50_Q2FYE4,UniRef:UniRef90_Q2FYE4
contig_1	Pyrodigal	gene	1561697	1562575	.	-	.	ID=GCA000560365_01475_gene;locus_tag=GCA000560365_01475
contig_1	Pyrodigal	CDS	1561697	1562575	.	-	0	ID=GCA000560365_01475;Name=Lipoprotein;locus_tag=GCA000560365_01475;product=Lipoprotein;Parent=GCA000560365_01475_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001548827.1,SO:0001217,UniParc:UPI00004B5BFC,UniRef:UniRef100_A0A1S5YLQ0,UniRef:UniRef50_A0A0H3JSF1,UniRef:UniRef90_Q2FYE3
contig_1	Pyrodigal	gene	1562692	1563609	.	-	.	ID=GCA000560365_01476_gene;locus_tag=GCA000560365_01476
contig_1	Pyrodigal	CDS	1562692	1563609	.	-	0	ID=GCA000560365_01476;Name=DUF1672 domain-containing protein;locus_tag=GCA000560365_01476;product=DUF1672 domain-containing protein;Parent=GCA000560365_01476_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000476873.1,SO:0001217,UniParc:UPI00000541E4,UniRef:UniRef100_Q2FYE2,UniRef:UniRef50_A0A0H3JSF1,UniRef:UniRef90_Q2FYE2
contig_1	Pyrodigal	gene	1564134	1565111	.	-	.	ID=GCA000560365_01477_gene;locus_tag=GCA000560365_01477;gene=lukF-PV
contig_1	Pyrodigal	CDS	1564134	1565111	.	-	0	ID=GCA000560365_01477;Name=Panton-Valentine bi-component leukocidin subunit F;locus_tag=GCA000560365_01477;product=Panton-Valentine bi-component leukocidin subunit F;gene=lukF-PV;Parent=GCA000560365_01477_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=NCBIProtein:BAA24008.1,SO:0001217,UniParc:UPI000009C32D,UniRef:UniRef100_A0A9X9K0A9,UniRef:UniRef50_Q2FVK1,UniRef:UniRef90_Q53747,VFDB:VFC0235,VFDB:VFG001276
contig_1	Pyrodigal	gene	1565113	1566051	.	-	.	ID=GCA000560365_01478_gene;locus_tag=GCA000560365_01478;gene=lukS-PV
contig_1	Pyrodigal	CDS	1565113	1566051	.	-	0	ID=GCA000560365_01478;Name=Panton-Valentine bi-component leukocidin subunit S;locus_tag=GCA000560365_01478;product=Panton-Valentine bi-component leukocidin subunit S;gene=lukS-PV;Parent=GCA000560365_01478_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=NCBIProtein:AGW33874.1,RefSeq:WP_000239545.1,SO:0001217,UniParc:UPI00000D9E0F,UniRef:UniRef100_A0A977TES7,UniRef:UniRef50_O54081,UniRef:UniRef90_A0FGS6,VFDB:VFC0235,VFDB:VFG001277
contig_1	Pyrodigal	gene	1566441	1567895	.	-	.	ID=GCA000560365_01479_gene;locus_tag=GCA000560365_01479
contig_1	Pyrodigal	CDS	1566441	1567895	.	-	0	ID=GCA000560365_01479;Name=putative autolysin PH;locus_tag=GCA000560365_01479;product=putative autolysin PH;Dbxref=GO:0008745,GO:0009253,GO:0030288,GO:0031640,GO:0042742,GO:0043093,GO:0071555;Parent=GCA000560365_01479_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01448,RefSeq:WP_000909220.1,SO:0001217,UniParc:UPI000009B886,UniRef:UniRef100_A0A977TEL1,UniRef:UniRef50_Q2FYD8,UniRef:UniRef90_Q2FYD8;ec_number=3.5.1.28
contig_1	Pyrodigal	gene	1567906	1568208	.	-	.	ID=GCA000560365_01480_gene;locus_tag=GCA000560365_01480
contig_1	Pyrodigal	CDS	1567906	1568208	.	-	0	ID=GCA000560365_01480;Name=phage holin;locus_tag=GCA000560365_01480;product=phage holin;Dbxref=GO:0140911;Parent=GCA000560365_01480_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000339146.1,SO:0001217,UniParc:UPI000009C019,UniRef:UniRef100_A0A977TEN7,UniRef:UniRef50_M1T2Y5,UniRef:UniRef90_M1T2Y5
contig_1	Pyrodigal	gene	1568344	1568643	.	-	.	ID=GCA000560365_01481_gene;locus_tag=GCA000560365_01481
contig_1	Pyrodigal	CDS	1568344	1568643	.	-	0	ID=GCA000560365_01481;Name=DUF2951 domain-containing protein;locus_tag=GCA000560365_01481;product=DUF2951 domain-containing protein;Parent=GCA000560365_01481_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000466784.1,SO:0001217,UniParc:UPI000009BE83,UniRef:UniRef100_Q4ZCR9,UniRef:UniRef50_A0EWN0,UniRef:UniRef90_A0EWN0
contig_1	Pyrodigal	gene	1568689	1568853	.	-	.	ID=GCA000560365_01482_gene;locus_tag=GCA000560365_01482;gene=xkdX
contig_1	Pyrodigal	CDS	1568689	1568853	.	-	0	ID=GCA000560365_01482;Name=XkdX family protein;locus_tag=GCA000560365_01482;product=XkdX family protein;gene=xkdX;Parent=GCA000560365_01482_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000916020.1,SO:0001217,UniParc:UPI00000541EC,UniRef:UniRef100_Q4ZCS0,UniRef:UniRef50_B2ZZ00,UniRef:UniRef90_M9QX31
contig_1	Pyrodigal	gene	1568846	1569235	.	-	.	ID=GCA000560365_01483_gene;locus_tag=GCA000560365_01483
contig_1	Pyrodigal	CDS	1568846	1569235	.	-	0	ID=GCA000560365_01483;Name=DUF2977 domain-containing protein;locus_tag=GCA000560365_01483;product=DUF2977 domain-containing protein;Parent=GCA000560365_01483_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001166599.1,SO:0001217,UniParc:UPI00000541ED,UniRef:UniRef100_Q2FYD4,UniRef:UniRef50_A0A0K1LKC8,UniRef:UniRef90_A0A0K1LKC8
contig_1	Pyrodigal	gene	1569235	1570701	.	-	.	ID=GCA000560365_01484_gene;locus_tag=GCA000560365_01484;gene=bppU
contig_1	Pyrodigal	CDS	1569235	1570701	.	-	0	ID=GCA000560365_01484;Name=BppU N-terminal domain-containing protein;locus_tag=GCA000560365_01484;product=BppU N-terminal domain-containing protein;gene=bppU;Parent=GCA000560365_01484_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000067127.1,SO:0001217,UniParc:UPI0000696C3D,UniRef:UniRef100_A0A977XQ24,UniRef:UniRef50_B5WZQ8,UniRef:UniRef90_B5WZQ8
contig_1	Pyrodigal	gene	1570701	1572611	.	-	.	ID=GCA000560365_01485_gene;locus_tag=GCA000560365_01485
contig_1	Pyrodigal	CDS	1570701	1572611	.	-	0	ID=GCA000560365_01485;Name=P68 RBP/TagC-like beta propeller domain-containing protein;locus_tag=GCA000560365_01485;product=P68 RBP/TagC-like beta propeller domain-containing protein;Parent=GCA000560365_01485_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000429558.1,SO:0001217,UniParc:UPI0000696C3E,UniRef:UniRef100_A0A977XRN8,UniRef:UniRef50_R4WAL5,UniRef:UniRef90_R4WAL5
contig_1	Pyrodigal	gene	1572627	1572917	.	-	.	ID=GCA000560365_01486_gene;locus_tag=GCA000560365_01486
contig_1	Pyrodigal	CDS	1572627	1572917	.	-	0	ID=GCA000560365_01486;Name=Phage protein;locus_tag=GCA000560365_01486;product=Phage protein;Parent=GCA000560365_01486_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000179858.1,SO:0001217,UniParc:UPI000009BCE2,UniRef:UniRef100_A0AAE7DSH6,UniRef:UniRef50_R4WEC3,UniRef:UniRef90_R4WEC3
contig_1	Pyrodigal	gene	1572917	1574500	.	-	.	ID=GCA000560365_01487_gene;locus_tag=GCA000560365_01487
contig_1	Pyrodigal	CDS	1572917	1574500	.	-	0	ID=GCA000560365_01487;Name=Peptidase;locus_tag=GCA000560365_01487;product=Peptidase;Parent=GCA000560365_01487_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000384474.1,SO:0001217,UniParc:UPI00000D9E12,UniRef:UniRef100_M1SNW3,UniRef:UniRef50_M9QX27,UniRef:UniRef90_R4WCV5
contig_1	Pyrodigal	gene	1574509	1575333	.	-	.	ID=GCA000560365_01488_gene;locus_tag=GCA000560365_01488
contig_1	Pyrodigal	CDS	1574509	1575333	.	-	0	ID=GCA000560365_01488;Name=Siphovirus-type tail component RIFT-related domain-containing protein;locus_tag=GCA000560365_01488;product=Siphovirus-type tail component RIFT-related domain-containing protein;Parent=GCA000560365_01488_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001190533.1,SO:0001217,UniParc:UPI00000541F2,UniRef:UniRef100_Q2FYC9,UniRef:UniRef50_R4WAV3,UniRef:UniRef90_R4WAV3
contig_1	Pyrodigal	gene	1575333	1581533	.	-	.	ID=GCA000560365_01489_gene;locus_tag=GCA000560365_01489
contig_1	Pyrodigal	CDS	1575333	1581533	.	-	0	ID=GCA000560365_01489;Name=lysostaphin;locus_tag=GCA000560365_01489;product=lysostaphin;Parent=GCA000560365_01489_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001003408.1,SO:0001217,UniParc:UPI0000696C3F,UniRef:UniRef100_A0A977TFF5,UniRef:UniRef50_Q2FYC8,UniRef:UniRef90_Q2FYC8
contig_1	Pyrodigal	gene	1581547	1581705	.	-	.	ID=GCA000560365_01490_gene;locus_tag=GCA000560365_01490
contig_1	Pyrodigal	CDS	1581547	1581705	.	-	0	ID=GCA000560365_01490;Name=Phage protein;locus_tag=GCA000560365_01490;product=Phage protein;Parent=GCA000560365_01490_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000438833.1,SO:0001217,UniParc:UPI00000541F4,UniRef:UniRef100_A0AAE9P536,UniRef:UniRef50_A0AAE9P536,UniRef:UniRef90_A0AAE9P536
contig_1	Pyrodigal	gene	1581747	1582097	.	-	.	ID=GCA000560365_01491_gene;locus_tag=GCA000560365_01491;gene=gpG
contig_1	Pyrodigal	CDS	1581747	1582097	.	-	0	ID=GCA000560365_01491;Name=phage tail assembly chaperone G;locus_tag=GCA000560365_01491;product=phage tail assembly chaperone G;gene=gpG;Parent=GCA000560365_01491_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000589167.1,SO:0001217,UniParc:UPI00000541F5,UniRef:UniRef100_A0A2K9VBQ8,UniRef:UniRef50_A0A0K1LKJ0,UniRef:UniRef90_A0A0K1LKJ0
contig_1	Pyrodigal	gene	1582155	1582610	.	-	.	ID=GCA000560365_01492_gene;locus_tag=GCA000560365_01492
contig_1	Pyrodigal	CDS	1582155	1582610	.	-	0	ID=GCA000560365_01492;Name=ORF023;locus_tag=GCA000560365_01492;product=ORF023;Parent=GCA000560365_01492_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000169127.1,SO:0001217,UniParc:UPI00003B16B7,UniRef:UniRef100_A0A2K9VBR9,UniRef:UniRef50_Q4ZCT1,UniRef:UniRef90_Q4ZCT1
contig_1	Pyrodigal	gene	1582702	1583343	.	-	.	ID=GCA000560365_01493_gene;locus_tag=GCA000560365_01493
contig_1	Pyrodigal	CDS	1582702	1583343	.	-	0	ID=GCA000560365_01493;Name=Tail protein;locus_tag=GCA000560365_01493;product=Tail protein;Parent=GCA000560365_01493_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000807536.1,SO:0001217,UniParc:UPI00000541F7,UniRef:UniRef100_Q2G2K1,UniRef:UniRef50_A0A2T4PZ36,UniRef:UniRef90_A0A9X9JV04
contig_1	Pyrodigal	gene	1583378	1583773	.	-	.	ID=GCA000560365_01494_gene;locus_tag=GCA000560365_01494
contig_1	Pyrodigal	CDS	1583378	1583773	.	-	0	ID=GCA000560365_01494;Name=DUF3168 domain-containing protein;locus_tag=GCA000560365_01494;product=DUF3168 domain-containing protein;Parent=GCA000560365_01494_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001023806.1,SO:0001217,UniParc:UPI00000541F8,UniRef:UniRef100_A0A2K9VBQ2,UniRef:UniRef50_A0A1L7RV34,UniRef:UniRef90_R4WAV1
contig_1	Pyrodigal	gene	1583774	1584175	.	-	.	ID=GCA000560365_01495_gene;locus_tag=GCA000560365_01495
contig_1	Pyrodigal	CDS	1583774	1584175	.	-	0	ID=GCA000560365_01495;Name=PhiSLT protein;locus_tag=GCA000560365_01495;product=PhiSLT protein;Parent=GCA000560365_01495_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000110023.1,SO:0001217,UniParc:UPI00000541F9,UniRef:UniRef100_Q2G2S5,UniRef:UniRef50_A0A1L7RVH1,UniRef:UniRef90_A0A6G4ZMM4
contig_1	Pyrodigal	gene	1584172	1584504	.	-	.	ID=GCA000560365_01496_gene;locus_tag=GCA000560365_01496
contig_1	Pyrodigal	CDS	1584172	1584504	.	-	0	ID=GCA000560365_01496;Name=Phage protein;locus_tag=GCA000560365_01496;product=Phage protein;Parent=GCA000560365_01496_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000395498.1,SO:0001217,UniParc:UPI00000541FA,UniRef:UniRef100_Q2G2S4,UniRef:UniRef50_M9QX19,UniRef:UniRef90_A0A9X9P522
contig_1	Pyrodigal	gene	1584516	1584794	.	-	.	ID=GCA000560365_01497_gene;locus_tag=GCA000560365_01497
contig_1	Pyrodigal	CDS	1584516	1584794	.	-	0	ID=GCA000560365_01497;Name=head-tail connector protein;locus_tag=GCA000560365_01497;product=head-tail connector protein;Dbxref=GO:0016032;Parent=GCA000560365_01497_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000050973.1,SO:0001217,UniParc:UPI00000541FB,UniRef:UniRef100_A0AAE9P379,UniRef:UniRef50_R4WAL3,UniRef:UniRef90_R4WAL3
contig_1	Pyrodigal	gene	1584863	1586026	.	-	.	ID=GCA000560365_01498_gene;locus_tag=GCA000560365_01498
contig_1	Pyrodigal	CDS	1584863	1586026	.	-	0	ID=GCA000560365_01498;Name=phage major capsid protein;locus_tag=GCA000560365_01498;product=phage major capsid protein;Dbxref=GO:0005198,GO:0019068,GO:0044423;Parent=GCA000560365_01498_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001142734.1,SO:0001217,UniParc:UPI000009B7B2,UniRef:UniRef100_A0A9E7MV44,UniRef:UniRef50_A0A1L7RSR1,UniRef:UniRef90_M1SVC5
contig_1	Pyrodigal	gene	1586038	1586811	.	-	.	ID=GCA000560365_01499_gene;locus_tag=GCA000560365_01499
contig_1	Pyrodigal	CDS	1586038	1586811	.	-	0	ID=GCA000560365_01499;Name=ATP-dependent Clp protease proteolytic subunit;locus_tag=GCA000560365_01499;product=ATP-dependent Clp protease proteolytic subunit;Parent=GCA000560365_01499_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000061866.1,SO:0001217,UniParc:UPI000009C1AD,UniRef:UniRef100_Q2G2S1,UniRef:UniRef50_A0A2T4PZ65,UniRef:UniRef90_A0AAJ4YUJ4
contig_1	Pyrodigal	gene	1586795	1588033	.	-	.	ID=GCA000560365_01500_gene;locus_tag=GCA000560365_01500
contig_1	Pyrodigal	CDS	1586795	1588033	.	-	0	ID=GCA000560365_01500;Name=phage portal protein;locus_tag=GCA000560365_01500;product=phage portal protein;Dbxref=GO:0005198,GO:0019068,GO:0044423;Parent=GCA000560365_01500_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001100664.1,SO:0001217,UniParc:UPI0000696C40,UniRef:UniRef100_A0A977XRN3,UniRef:UniRef50_A0A077RGY7,UniRef:UniRef90_A0A977XRN3
contig_1	Pyrodigal	gene	1588038	1589729	.	-	.	ID=GCA000560365_01501_gene;locus_tag=GCA000560365_01501
contig_1	Pyrodigal	CDS	1588038	1589729	.	-	0	ID=GCA000560365_01501;Name=Terminase large subunit;locus_tag=GCA000560365_01501;product=Terminase large subunit;Parent=GCA000560365_01501_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000153540.1,SO:0001217,UniParc:UPI0000505959,UniRef:UniRef100_A0A8E7KZI2,UniRef:UniRef50_A0A429X5P5,UniRef:UniRef90_B5WZP1
contig_1	Pyrodigal	gene	1589719	1590024	.	-	.	ID=GCA000560365_01502_gene;locus_tag=GCA000560365_01502
contig_1	Pyrodigal	CDS	1589719	1590024	.	-	0	ID=GCA000560365_01502;Name=Terminase small subunit;locus_tag=GCA000560365_01502;product=Terminase small subunit;Parent=GCA000560365_01502_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000778933.1,SO:0001217,UniParc:UPI0000054200,UniRef:UniRef100_Q2FYC5,UniRef:UniRef50_A0A073K507,UniRef:UniRef90_A0A2I6PDN6
contig_1	Pyrodigal	gene	1590151	1590465	.	-	.	ID=GCA000560365_01503_gene;locus_tag=GCA000560365_01503
contig_1	Pyrodigal	CDS	1590151	1590465	.	-	0	ID=GCA000560365_01503;Name=HNH endonuclease;locus_tag=GCA000560365_01503;product=HNH endonuclease;Parent=GCA000560365_01503_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000160686.1,SO:0001217,UniParc:UPI0000696C41,UniRef:UniRef100_A0A977XQL3,UniRef:UniRef50_A0A0H3JWK3,UniRef:UniRef90_A0A977XQL3
contig_1	Pyrodigal	gene	1590622	1591059	.	-	.	ID=GCA000560365_01504_gene;locus_tag=GCA000560365_01504
contig_1	Pyrodigal	CDS	1590622	1591059	.	-	0	ID=GCA000560365_01504;Name=Transcriptional regulator;locus_tag=GCA000560365_01504;product=Transcriptional regulator;Parent=GCA000560365_01504_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000528512.1,SO:0001217,UniParc:UPI000009B96E,UniRef:UniRef100_A0A345AQA4,UniRef:UniRef50_R4WCU7,UniRef:UniRef90_R4WCU7
contig_1	Pyrodigal	gene	1591072	1592430	.	-	.	ID=GCA000560365_01505_gene;locus_tag=GCA000560365_01505
contig_1	Pyrodigal	CDS	1591072	1592430	.	-	0	ID=GCA000560365_01505;Name=DNA helicase;locus_tag=GCA000560365_01505;product=DNA helicase;Parent=GCA000560365_01505_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00016997E7,UniRef:UniRef100_A0A1S6A291,UniRef:UniRef50_A0A411BM78,UniRef:UniRef90_A0A411BM78
contig_1	Pyrodigal	gene	1592420	1592710	.	-	.	ID=GCA000560365_01506_gene;locus_tag=GCA000560365_01506
contig_1	Pyrodigal	CDS	1592420	1592710	.	-	0	ID=GCA000560365_01506;Name=VRR-NUC domain-containing protein;locus_tag=GCA000560365_01506;product=VRR-NUC domain-containing protein;Parent=GCA000560365_01506_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001548892.1,SO:0001217,UniParc:UPI0000696C43,UniRef:UniRef100_A0A977TER0,UniRef:UniRef50_A7TWI5,UniRef:UniRef90_A7TWI5
contig_1	Pyrodigal	gene	1593051	1595498	.	-	.	ID=GCA000560365_01507_gene;locus_tag=GCA000560365_01507
contig_1	Pyrodigal	CDS	1593051	1595498	.	-	0	ID=GCA000560365_01507;Name=Virulence-associated protein E-like domain-containing protein;locus_tag=GCA000560365_01507;product=Virulence-associated protein E-like domain-containing protein;Parent=GCA000560365_01507_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000884870.1,SO:0001217,UniParc:UPI00000D9E1B,UniRef:UniRef100_U5U4T5,UniRef:UniRef50_A0A419SQH7,UniRef:UniRef90_U5U4T5
contig_1	Pyrodigal	gene	1595553	1595759	.	+	.	ID=GCA000560365_01508_gene;locus_tag=GCA000560365_01508
contig_1	Pyrodigal	CDS	1595553	1595759	.	+	0	ID=GCA000560365_01508;Name=hypothetical protein;locus_tag=GCA000560365_01508;product=hypothetical protein;Parent=GCA000560365_01508_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001548893.1,SO:0001217,UniParc:UPI00000D9E1C,UniRef:UniRef100_A0A1X9IGZ9,UniRef:UniRef50_A0A1X9IGZ9,UniRef:UniRef90_A0A1X9IGZ9
contig_1	Pyrodigal	gene	1595786	1595986	.	-	.	ID=GCA000560365_01509_gene;locus_tag=GCA000560365_01509
contig_1	Pyrodigal	CDS	1595786	1595986	.	-	0	ID=GCA000560365_01509;Name=DUF1514 domain-containing protein;locus_tag=GCA000560365_01509;product=DUF1514 domain-containing protein;Parent=GCA000560365_01509_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000265252.1,SO:0001217,UniParc:UPI00000D9E1D,UniRef:UniRef100_A0A977TFN6,UniRef:UniRef50_A0A0K1LL54,UniRef:UniRef90_A0A0K1LL54
contig_1	Bakta	gene	1595989	1596060	.	-	.	ID=GCA000560365_01510_gene;locus_tag=GCA000560365_01510;inference=ab initio prediction:Bakta
contig_1	Bakta	CDS	1595989	1596060	.	-	0	ID=GCA000560365_01510;Name=Hypothetical phage protein;locus_tag=GCA000560365_01510;product=Hypothetical phage protein;Parent=GCA000560365_01510_gene;Note=SO:0001217,UniParc:UPI00003B16C3,UniRef:UniRef100_A0A7U7EV04,UniRef:UniRef50_A0A7U7EV04,UniRef:UniRef90_A0A7U7EV04
contig_1	Pyrodigal	gene	1596054	1596206	.	-	.	ID=GCA000560365_01511_gene;locus_tag=GCA000560365_01511;gene=rinB
contig_1	Pyrodigal	CDS	1596054	1596206	.	-	0	ID=GCA000560365_01511;Name=transcriptional activator RinB;locus_tag=GCA000560365_01511;product=transcriptional activator RinB;gene=rinB;Parent=GCA000560365_01511_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000595263.1,SO:0001217,UniParc:UPI00003B1AA3,UniRef:UniRef100_A0AAE7AJY6,UniRef:UniRef50_A0A2I6PE89,UniRef:UniRef90_A0A9X9K0S8
contig_1	Pyrodigal	gene	1596203	1596592	.	-	.	ID=GCA000560365_01512_gene;locus_tag=GCA000560365_01512
contig_1	Pyrodigal	CDS	1596203	1596592	.	-	0	ID=GCA000560365_01512;Name=secreted protein;locus_tag=GCA000560365_01512;product=secreted protein;Parent=GCA000560365_01512_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_C8CH08,UniRef:UniRef90_UPI0013665542
contig_1	Pyrodigal	gene	1596582	1596818	.	-	.	ID=GCA000560365_01513_gene;locus_tag=GCA000560365_01513
contig_1	Pyrodigal	CDS	1596582	1596818	.	-	0	ID=GCA000560365_01513;Name=Phage protein;locus_tag=GCA000560365_01513;product=Phage protein;Parent=GCA000560365_01513_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A9CR94,UniRef:UniRef90_A9CR94
contig_1	Pyrodigal	gene	1596811	1597014	.	-	.	ID=GCA000560365_01514_gene;locus_tag=GCA000560365_01514
contig_1	Pyrodigal	CDS	1596811	1597014	.	-	0	ID=GCA000560365_01514;Name=Phage protein;locus_tag=GCA000560365_01514;product=Phage protein;Parent=GCA000560365_01514_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000141180.1,SO:0001217,UniParc:UPI0000696C44,UniRef:UniRef100_A0A977XPX7,UniRef:UniRef50_A0A2K4ANQ7,UniRef:UniRef90_A0A2K4ANQ7
contig_1	Pyrodigal	gene	1597011	1597217	.	-	.	ID=GCA000560365_01515_gene;locus_tag=GCA000560365_01515
contig_1	Pyrodigal	CDS	1597011	1597217	.	-	0	ID=GCA000560365_01515;Name=DUF1381 domain-containing protein;locus_tag=GCA000560365_01515;product=DUF1381 domain-containing protein;Parent=GCA000560365_01515_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000195794.1,SO:0001217,UniParc:UPI0000696C45,UniRef:UniRef100_A0A977XR61,UniRef:UniRef50_A9CR91,UniRef:UniRef90_A0A0C6ELC0
contig_1	Pyrodigal	gene	1597254	1597790	.	-	.	ID=GCA000560365_01516_gene;locus_tag=GCA000560365_01516
contig_1	Pyrodigal	CDS	1597254	1597790	.	-	0	ID=GCA000560365_01516;Name=dUTPase;locus_tag=GCA000560365_01516;product=dUTPase;Parent=GCA000560365_01516_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000185671.1,SO:0001217,UniParc:UPI0000696C46,UniRef:UniRef100_A0A977XQL0,UniRef:UniRef50_A0A7U7JTE6,UniRef:UniRef90_U5U798
contig_1	Pyrodigal	gene	1597783	1598031	.	-	.	ID=GCA000560365_01517_gene;locus_tag=GCA000560365_01517
contig_1	Pyrodigal	CDS	1597783	1598031	.	-	0	ID=GCA000560365_01517;Name=DUF1024 domain-containing protein;locus_tag=GCA000560365_01517;product=DUF1024 domain-containing protein;Parent=GCA000560365_01517_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001065039.1,SO:0001217,UniParc:UPI0000696C47,UniRef:UniRef100_A0A977TFE3,UniRef:UniRef50_A9CR86,UniRef:UniRef90_A0A0N9BAY6
contig_1	Pyrodigal	gene	1598046	1598288	.	-	.	ID=GCA000560365_01518_gene;locus_tag=GCA000560365_01518
contig_1	Pyrodigal	CDS	1598046	1598288	.	-	0	ID=GCA000560365_01518;Name=Phage protein;locus_tag=GCA000560365_01518;product=Phage protein;Parent=GCA000560365_01518_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000132194.1,SO:0001217,UniParc:UPI0000696C48,UniRef:UniRef100_A0A977XQ34,UniRef:UniRef50_A9CR79,UniRef:UniRef90_M9NRL7
contig_1	Pyrodigal	gene	1598303	1598503	.	-	.	ID=GCA000560365_01519_gene;locus_tag=GCA000560365_01519
contig_1	Pyrodigal	CDS	1598303	1598503	.	-	0	ID=GCA000560365_01519;Name=Phage protein;locus_tag=GCA000560365_01519;product=Phage protein;Parent=GCA000560365_01519_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000235324.1,SO:0001217,UniParc:UPI00003B16CD,UniRef:UniRef100_A0A977XRQ6,UniRef:UniRef50_C5I650,UniRef:UniRef90_C5I650
contig_1	Pyrodigal	gene	1598506	1598763	.	-	.	ID=GCA000560365_01520_gene;locus_tag=GCA000560365_01520
contig_1	Pyrodigal	CDS	1598506	1598763	.	-	0	ID=GCA000560365_01520;Name=DUF3310 domain-containing protein;locus_tag=GCA000560365_01520;product=DUF3310 domain-containing protein;Parent=GCA000560365_01520_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000022728.1,SO:0001217,UniParc:UPI00000D9E28,UniRef:UniRef100_A0AAE7AJX8,UniRef:UniRef50_B2ZYW4,UniRef:UniRef90_B2ZYW4
contig_1	Pyrodigal	gene	1598763	1599164	.	-	.	ID=GCA000560365_01521_gene;locus_tag=GCA000560365_01521
contig_1	Pyrodigal	CDS	1598763	1599164	.	-	0	ID=GCA000560365_01521;Name=PVL family protein;locus_tag=GCA000560365_01521;product=PVL family protein;Parent=GCA000560365_01521_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000113974.1,SO:0001217,UniParc:UPI00000D9E29,UniRef:UniRef100_A0A2K9VBY6,UniRef:UniRef50_A0A2I6PEE6,UniRef:UniRef90_A0A2D1G5N4
contig_1	Pyrodigal	gene	1599164	1599349	.	-	.	ID=GCA000560365_01522_gene;locus_tag=GCA000560365_01522
contig_1	Pyrodigal	CDS	1599164	1599349	.	-	0	ID=GCA000560365_01522;Name=DUF3113 domain-containing protein;locus_tag=GCA000560365_01522;product=DUF3113 domain-containing protein;Parent=GCA000560365_01522_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001164629.1,SO:0001217,UniParc:UPI0000054219,UniRef:UniRef100_Q2FYA2,UniRef:UniRef50_G5JH61,UniRef:UniRef90_M9QQK5
contig_1	Pyrodigal	gene	1599362	1601323	.	-	.	ID=GCA000560365_01523_gene;locus_tag=GCA000560365_01523
contig_1	Pyrodigal	CDS	1599362	1601323	.	-	0	ID=GCA000560365_01523;Name=DNA polymerase;locus_tag=GCA000560365_01523;product=DNA polymerase;Parent=GCA000560365_01523_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02334,SO:0001217,UniParc:UPI00000D9E2A,UniRef:UniRef100_A0A977TEK8,UniRef:UniRef50_B5WZM5,UniRef:UniRef90_B5WZM5;ec_number=2.7.7.7
contig_1	Pyrodigal	gene	1601382	1601939	.	-	.	ID=GCA000560365_01524_gene;locus_tag=GCA000560365_01524
contig_1	Pyrodigal	CDS	1601382	1601939	.	-	0	ID=GCA000560365_01524;Name=DUF2815 domain-containing protein;locus_tag=GCA000560365_01524;product=DUF2815 domain-containing protein;Parent=GCA000560365_01524_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000645048.1,SO:0001217,UniParc:UPI00000D9E2B,UniRef:UniRef100_M1TB24,UniRef:UniRef50_B8I925,UniRef:UniRef90_M1TB24
contig_1	Pyrodigal	gene	1601965	1603131	.	-	.	ID=GCA000560365_01525_gene;locus_tag=GCA000560365_01525
contig_1	Pyrodigal	CDS	1601965	1603131	.	-	0	ID=GCA000560365_01525;Name=DUF2800 domain-containing protein;locus_tag=GCA000560365_01525;product=DUF2800 domain-containing protein;Parent=GCA000560365_01525_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000762552.1,SO:0001217,UniParc:UPI00000D9E2C,UniRef:UniRef100_A0AAE7DT35,UniRef:UniRef50_B5WZM3,UniRef:UniRef90_B5WZM3
contig_1	Pyrodigal	gene	1603128	1603490	.	-	.	ID=GCA000560365_01526_gene;locus_tag=GCA000560365_01526
contig_1	Pyrodigal	CDS	1603128	1603490	.	-	0	ID=GCA000560365_01526;Name=Phage protein;locus_tag=GCA000560365_01526;product=Phage protein;Parent=GCA000560365_01526_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000985979.1,SO:0001217,UniParc:UPI00000D9E2D,UniRef:UniRef100_A0AAE7AJY3,UniRef:UniRef50_A0A0K1LKE9,UniRef:UniRef90_A0A0K1LKE9
contig_1	Pyrodigal	gene	1603504	1603764	.	-	.	ID=GCA000560365_01527_gene;locus_tag=GCA000560365_01527
contig_1	Pyrodigal	CDS	1603504	1603764	.	-	0	ID=GCA000560365_01527;Name=DUF1108 domain-containing protein;locus_tag=GCA000560365_01527;product=DUF1108 domain-containing protein;Parent=GCA000560365_01527_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000291481.1,SO:0001217,UniParc:UPI0000696C4A,UniRef:UniRef100_A0A977XQ15,UniRef:UniRef50_A0A2I6PDT0,UniRef:UniRef90_A0A977XQ15
contig_1	Pyrodigal	gene	1603769	1604071	.	-	.	ID=GCA000560365_01528_gene;locus_tag=GCA000560365_01528
contig_1	Pyrodigal	CDS	1603769	1604071	.	-	0	ID=GCA000560365_01528;Name=DUF2482 domain-containing protein;locus_tag=GCA000560365_01528;product=DUF2482 domain-containing protein;Parent=GCA000560365_01528_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000163431.1,SO:0001217,UniParc:UPI00015FD725,UniRef:UniRef100_A0A977XRM7,UniRef:UniRef50_A0A2I6PE07,UniRef:UniRef90_A0A2I6PE07
contig_1	Pyrodigal	gene	1604064	1604381	.	-	.	ID=GCA000560365_01529_gene;locus_tag=GCA000560365_01529
contig_1	Pyrodigal	CDS	1604064	1604381	.	-	0	ID=GCA000560365_01529;Name=Phage protein;locus_tag=GCA000560365_01529;product=Phage protein;Parent=GCA000560365_01529_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000829612.1,SO:0001217,UniParc:UPI0000696C4B,UniRef:UniRef100_A0A977XPX5,UniRef:UniRef50_M9NUK8,UniRef:UniRef90_M9NUK8
contig_1	Pyrodigal	gene	1604647	1604910	.	-	.	ID=GCA000560365_01530_gene;locus_tag=GCA000560365_01530
contig_1	Pyrodigal	CDS	1604647	1604910	.	-	0	ID=GCA000560365_01530;Name=DNA-binding protein;locus_tag=GCA000560365_01530;product=DNA-binding protein;Parent=GCA000560365_01530_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0AAE8Z0C4,UniRef:UniRef90_A0AAE8Z0C4
contig_1	Pyrodigal	gene	1604935	1605150	.	-	.	ID=GCA000560365_01531_gene;locus_tag=GCA000560365_01531
contig_1	Pyrodigal	CDS	1604935	1605150	.	-	0	ID=GCA000560365_01531;Name=Phage protein;locus_tag=GCA000560365_01531;product=Phage protein;Parent=GCA000560365_01531_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001036299.1,SO:0001217,UniParc:UPI00003B1A93,UniRef:UniRef100_A0A977TFT7,UniRef:UniRef50_A0A898CJM3,UniRef:UniRef90_A0A898CJM3
contig_1	Pyrodigal	gene	1605197	1605436	.	+	.	ID=GCA000560365_01532_gene;locus_tag=GCA000560365_01532
contig_1	Pyrodigal	CDS	1605197	1605436	.	+	0	ID=GCA000560365_01532;Name=hypothetical protein;locus_tag=GCA000560365_01532;product=hypothetical protein;Parent=GCA000560365_01532_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001548903.1,SO:0001217,UniParc:UPI00003B1A92,UniRef:UniRef100_A0A9E7MVJ1,UniRef:UniRef50_A0A0H3U2T9,UniRef:UniRef90_A0A0H3U2T9
contig_1	Pyrodigal	gene	1605433	1605609	.	-	.	ID=GCA000560365_01533_gene;locus_tag=GCA000560365_01533
contig_1	Pyrodigal	CDS	1605433	1605609	.	-	0	ID=GCA000560365_01533;Name=hypothetical protein;locus_tag=GCA000560365_01533;product=hypothetical protein;Parent=GCA000560365_01533_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001001356.1,SO:0001217,UniParc:UPI00003B1A91,UniRef:UniRef100_A0A2C9TR45,UniRef:UniRef50_A0A2C9TR45,UniRef:UniRef90_A0A2C9TR45
contig_1	Pyrodigal	gene	1605693	1605884	.	-	.	ID=GCA000560365_01534_gene;locus_tag=GCA000560365_01534
contig_1	Pyrodigal	CDS	1605693	1605884	.	-	0	ID=GCA000560365_01534;Name=XRE family transcriptional regulator;locus_tag=GCA000560365_01534;product=XRE family transcriptional regulator;Parent=GCA000560365_01534_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001115060.1,SO:0001217,UniParc:UPI00000CAE86,UniRef:UniRef100_A0A977XRP8,UniRef:UniRef50_A0AAE7P0Q9,UniRef:UniRef90_A0AA40JN51
contig_1	Pyrodigal	gene	1606045	1606374	.	+	.	ID=GCA000560365_01535_gene;locus_tag=GCA000560365_01535
contig_1	Pyrodigal	CDS	1606045	1606374	.	+	0	ID=GCA000560365_01535;Name=DNA-binding helix-turn-helix protein;locus_tag=GCA000560365_01535;product=DNA-binding helix-turn-helix protein;Parent=GCA000560365_01535_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000429766.1,SO:0001217,UniParc:UPI00000CAE85,UniRef:UniRef100_A0AAE7ANM5,UniRef:UniRef50_A0A364JKZ8,UniRef:UniRef90_A0A0K1LKK8
contig_1	Pyrodigal	gene	1606378	1606848	.	+	.	ID=GCA000560365_01536_gene;locus_tag=GCA000560365_01536
contig_1	Pyrodigal	CDS	1606378	1606848	.	+	0	ID=GCA000560365_01536;Name=Toxin;locus_tag=GCA000560365_01536;product=Toxin;Parent=GCA000560365_01536_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001F62F35,UniRef:UniRef100_A0A977TEK1,UniRef:UniRef50_M9NUH9,UniRef:UniRef90_A0A0H3JQL7
contig_1	Pyrodigal	gene	1606866	1607300	.	+	.	ID=GCA000560365_01537_gene;locus_tag=GCA000560365_01537
contig_1	Pyrodigal	CDS	1606866	1607300	.	+	0	ID=GCA000560365_01537;Name=Lipoprotein;locus_tag=GCA000560365_01537;product=Lipoprotein;Parent=GCA000560365_01537_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000755722.1,SO:0001217,UniParc:UPI0000696C4E,UniRef:UniRef100_A0A977TF97,UniRef:UniRef50_A0A641ACN8,UniRef:UniRef90_A0A641ACN8
contig_1	Pyrodigal	gene	1607329	1607724	.	+	.	ID=GCA000560365_01538_gene;locus_tag=GCA000560365_01538
contig_1	Pyrodigal	CDS	1607329	1607724	.	+	0	ID=GCA000560365_01538;Name=Phage protein;locus_tag=GCA000560365_01538;product=Phage protein;Parent=GCA000560365_01538_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000449655.1,SO:0001217,UniParc:UPI000009B36B,UniRef:UniRef100_A0A2K9VBV5,UniRef:UniRef50_A0ZS06,UniRef:UniRef90_A0A0H3JWE4
contig_1	Pyrodigal	gene	1607835	1607960	.	+	.	ID=GCA000560365_01539_gene;locus_tag=GCA000560365_01539
contig_1	Pyrodigal	CDS	1607835	1607960	.	+	0	ID=GCA000560365_01539;Name=Staphylokinase;locus_tag=GCA000560365_01539;product=Staphylokinase;Parent=GCA000560365_01539_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000227849.1,SO:0001217,UniParc:UPI00016991FC,UniRef:UniRef100_A0A9X9JWJ2,UniRef:UniRef50_A0A9X9JZX3,UniRef:UniRef90_A0A9X9JWJ2
contig_1	Pyrodigal	gene	1607957	1608571	.	-	.	ID=GCA000560365_01540_gene;locus_tag=GCA000560365_01540
contig_1	Pyrodigal	CDS	1607957	1608571	.	-	0	ID=GCA000560365_01540;Name=ATPase;locus_tag=GCA000560365_01540;product=ATPase;Parent=GCA000560365_01540_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000191466.1,SO:0001217,UniParc:UPI000009BB14,UniRef:UniRef100_Q4ZCR5,UniRef:UniRef50_O80069,UniRef:UniRef90_O80069
contig_1	Pyrodigal	gene	1608697	1609902	.	+	.	ID=GCA000560365_01541_gene;locus_tag=GCA000560365_01541
contig_1	Pyrodigal	CDS	1608697	1609902	.	+	0	ID=GCA000560365_01541;Name=Integrase;locus_tag=GCA000560365_01541;product=Integrase;Parent=GCA000560365_01541_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000264751.1,SO:0001217,UniParc:UPI000009C32E,UniRef:UniRef100_A0A345AQ68,UniRef:UniRef50_P20709,UniRef:UniRef90_A0A977TEW5
contig_1	Pyrodigal	gene	1609945	1611099	.	-	.	ID=GCA000560365_01542_gene;locus_tag=GCA000560365_01542
contig_1	Pyrodigal	CDS	1609945	1611099	.	-	0	ID=GCA000560365_01542;Name=Lipoprotein;locus_tag=GCA000560365_01542;product=Lipoprotein;Parent=GCA000560365_01542_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00024E4E62,UniRef:UniRef100_A0A2C6N4I3,UniRef:UniRef50_A0A0E1X540,UniRef:UniRef90_A0A7U7JUS1
contig_1	Pyrodigal	gene	1611126	1611971	.	-	.	ID=GCA000560365_01543_gene;locus_tag=GCA000560365_01543
contig_1	Pyrodigal	CDS	1611126	1611971	.	-	0	ID=GCA000560365_01543;Name=Lipoprotein;locus_tag=GCA000560365_01543;product=Lipoprotein;Parent=GCA000560365_01543_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00024E4C34,UniRef:UniRef100_A0A133PWN9,UniRef:UniRef50_A0A0E1X540,UniRef:UniRef90_A0AAP8CQY8
contig_1	Pyrodigal	gene	1611964	1612893	.	-	.	ID=GCA000560365_01544_gene;locus_tag=GCA000560365_01544
contig_1	Pyrodigal	CDS	1611964	1612893	.	-	0	ID=GCA000560365_01544;Name=Lipoprotein;locus_tag=GCA000560365_01544;product=Lipoprotein;Parent=GCA000560365_01544_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001548912.1,SO:0001217,UniParc:UPI0000054310,UniRef:UniRef100_Q2FY81,UniRef:UniRef50_A0A0H3JSF1,UniRef:UniRef90_Q2FY81
contig_1	Pyrodigal	gene	1613138	1614889	.	-	.	ID=GCA000560365_01545_gene;locus_tag=GCA000560365_01545;gene=srrB
contig_1	Pyrodigal	CDS	1613138	1614889	.	-	0	ID=GCA000560365_01545;Name=two-component system sensor histidine kinase SrrB;locus_tag=GCA000560365_01545;product=two-component system sensor histidine kinase SrrB;Dbxref=GO:0000155,GO:0000156,GO:0005524,GO:0005886,GO:0007234,GO:0030295;gene=srrB;Parent=GCA000560365_01545_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000987769,COG:COG5002,COG:T,KEGG:K07651,RefSeq:WP_000987769.1,SO:0001217,UniParc:UPI00004B5BFF,UniRef:UniRef100_Q2FY80,UniRef:UniRef50_Q9L523,UniRef:UniRef90_Q9L523;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	1614870	1615595	.	-	.	ID=GCA000560365_01546_gene;locus_tag=GCA000560365_01546;gene=srrA
contig_1	Pyrodigal	CDS	1614870	1615595	.	-	0	ID=GCA000560365_01546;Name=two-component system response regulator SrrA;locus_tag=GCA000560365_01546;product=two-component system response regulator SrrA;Dbxref=GO:0000156,GO:0000976,GO:0005829,GO:0006355,GO:0032993;gene=srrA;Parent=GCA000560365_01546_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000064078,COG:COG0745,COG:TK,RefSeq:WP_000064078.1,SO:0001217,UniParc:UPI00000D76FC,UniRef:UniRef100_Q2FY79,UniRef:UniRef50_P35163,UniRef:UniRef90_Q2FY79
contig_1	Pyrodigal	gene	1615728	1616465	.	-	.	ID=GCA000560365_01547_gene;locus_tag=GCA000560365_01547;gene=rsuA
contig_1	Pyrodigal	CDS	1615728	1616465	.	-	0	ID=GCA000560365_01547;Name=Pseudouridine synthase;locus_tag=GCA000560365_01547;product=Pseudouridine synthase;gene=rsuA;Parent=GCA000560365_01547_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1187,COG:J,RefSeq:WP_000159577.1,SO:0001217,UniParc:UPI000005430C,UniRef:UniRef100_Q2FY78,UniRef:UniRef50_A0A090YKY4,UniRef:UniRef90_A0A7U7IEK5
contig_1	Pyrodigal	gene	1616458	1617000	.	-	.	ID=GCA000560365_01548_gene;locus_tag=GCA000560365_01548;gene=scpB
contig_1	Pyrodigal	CDS	1616458	1617000	.	-	0	ID=GCA000560365_01548;Name=SMC-Scp complex subunit ScpB;locus_tag=GCA000560365_01548;product=SMC-Scp complex subunit ScpB;Dbxref=GO:0005515,GO:0005737,GO:0006260,GO:0007059,GO:0051301,GO:0051304;gene=scpB;Parent=GCA000560365_01548_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1386,COG:K,KEGG:K06024,RefSeq:WP_000368653.1,SO:0001217,UniParc:UPI00004B5C00,UniRef:UniRef100_Q2FY77,UniRef:UniRef50_Q2FY77,UniRef:UniRef90_Q2FY77
contig_1	Pyrodigal	gene	1616993	1617748	.	-	.	ID=GCA000560365_01549_gene;locus_tag=GCA000560365_01549;gene=scpA
contig_1	Pyrodigal	CDS	1616993	1617748	.	-	0	ID=GCA000560365_01549;Name=Segregation and condensation protein A;locus_tag=GCA000560365_01549;product=Segregation and condensation protein A;Dbxref=GO:0005737,GO:0006260,GO:0007059,GO:0051301;gene=scpA;Parent=GCA000560365_01549_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1354,COG:L,KEGG:K05896,SO:0001217,UniParc:UPI00000D768E,UniRef:UniRef100_Q2FY76,UniRef:UniRef50_Q6GGK3,UniRef:UniRef90_Q6GGK3
contig_1	Pyrodigal	gene	1617816	1618322	.	+	.	ID=GCA000560365_01550_gene;locus_tag=GCA000560365_01550;gene=ypuF
contig_1	Pyrodigal	CDS	1617816	1618322	.	+	0	ID=GCA000560365_01550;Name=Cytosolic protein;locus_tag=GCA000560365_01550;product=Cytosolic protein;gene=ypuF;Parent=GCA000560365_01550_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1547,COG:S,KEGG:K09763,RefSeq:WP_001183429.1,SO:0001217,UniParc:UPI0000054309,UniRef:UniRef100_Q2FY75,UniRef:UniRef50_Q2FY75,UniRef:UniRef90_Q2FY75
contig_1	Pyrodigal	gene	1618400	1619287	.	-	.	ID=GCA000560365_01551_gene;locus_tag=GCA000560365_01551;gene=xerD
contig_1	Pyrodigal	CDS	1618400	1619287	.	-	0	ID=GCA000560365_01551;Name=site-specific tyrosine recombinase XerD;locus_tag=GCA000560365_01551;product=site-specific tyrosine recombinase XerD;Dbxref=GO:0003677,GO:0005737,GO:0006310,GO:0006313,GO:0007059,GO:0009009,GO:0009037,GO:0051301;gene=xerD;Parent=GCA000560365_01551_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4974,COG:L,RefSeq:WP_000447733.1,SO:0001217,UniParc:UPI00000D7702,UniRef:UniRef100_Q5HFS5,UniRef:UniRef50_Q5HFS5,UniRef:UniRef90_Q5HFS5
contig_1	Pyrodigal	gene	1619336	1619785	.	-	.	ID=GCA000560365_01552_gene;locus_tag=GCA000560365_01552;gene=fur
contig_1	Pyrodigal	CDS	1619336	1619785	.	-	0	ID=GCA000560365_01552;Name=Transcriptional regulator%2C Fur%2C putative;locus_tag=GCA000560365_01552;product=Transcriptional regulator%2C Fur%2C putative;gene=fur;Parent=GCA000560365_01552_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0735,COG:P,RefSeq:WP_000392691.1,SO:0001217,UniParc:UPI00000D782F,UniRef:UniRef100_Q2FY73,UniRef:UniRef50_Q2FY73,UniRef:UniRef90_Q2FY73
contig_1	Pyrodigal	gene	1619890	1620432	.	-	.	ID=GCA000560365_01553_gene;locus_tag=GCA000560365_01553;gene=mutT
contig_1	Pyrodigal	CDS	1619890	1620432	.	-	0	ID=GCA000560365_01553;Name=GDP-mannose pyrophosphatase;locus_tag=GCA000560365_01553;product=GDP-mannose pyrophosphatase;gene=mutT;Parent=GCA000560365_01553_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0494,COG:V,RefSeq:WP_000365246.1,SO:0001217,UniParc:UPI00000D9E3F,UniRef:UniRef100_Q2FY72,UniRef:UniRef50_A0A8I0L781,UniRef:UniRef90_A0A8I0L781
contig_1	Pyrodigal	gene	1620514	1621422	.	+	.	ID=GCA000560365_01554_gene;locus_tag=GCA000560365_01554;gene=pdxI
contig_1	Pyrodigal	CDS	1620514	1621422	.	+	0	ID=GCA000560365_01554;Name=NADPH-dependent aldo-keto reductase;locus_tag=GCA000560365_01554;product=NADPH-dependent aldo-keto reductase;gene=pdxI;Parent=GCA000560365_01554_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0667,COG:HR,RefSeq:WP_001171351.1,SO:0001217,UniParc:UPI0000054305,UniRef:UniRef100_Q2FY71,UniRef:UniRef50_A0A380G9Q4,UniRef:UniRef90_A0A7U7JUR9
contig_1	Pyrodigal	gene	1621638	1621886	.	-	.	ID=GCA000560365_01555_gene;locus_tag=GCA000560365_01555
contig_1	Pyrodigal	CDS	1621638	1621886	.	-	0	ID=GCA000560365_01555;Name=Phage protein;locus_tag=GCA000560365_01555;product=Phage protein;Parent=GCA000560365_01555_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000995800.1,SO:0001217,UniParc:UPI00000CAAC1,UniRef:UniRef100_Q2FY70,UniRef:UniRef50_A0A2K4AGQ5,UniRef:UniRef90_Q2FY70
contig_1	Pyrodigal	gene	1621902	1622657	.	-	.	ID=GCA000560365_01556_gene;locus_tag=GCA000560365_01556;gene=yqjQ
contig_1	Pyrodigal	CDS	1621902	1622657	.	-	0	ID=GCA000560365_01556;Name=SDR family oxidoreductase;locus_tag=GCA000560365_01556;product=SDR family oxidoreductase;gene=yqjQ;Parent=GCA000560365_01556_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0300,COG:R,RefSeq:WP_000678232.1,SO:0001217,UniParc:UPI00000CA987,UniRef:UniRef100_Q2FY69,UniRef:UniRef50_Q2FY69,UniRef:UniRef90_Q2FY69
contig_1	Pyrodigal	gene	1622799	1623614	.	+	.	ID=GCA000560365_01557_gene;locus_tag=GCA000560365_01557;gene=proC
contig_1	Pyrodigal	CDS	1622799	1623614	.	+	0	ID=GCA000560365_01557;Name=pyrroline-5-carboxylate reductase;locus_tag=GCA000560365_01557;product=pyrroline-5-carboxylate reductase;Dbxref=GO:0004735,GO:0005737,GO:0006561,GO:0055129;gene=proC;Parent=GCA000560365_01557_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0345,COG:E,RefSeq:WP_000779748.1,SO:0001217,UniParc:UPI00003B16E7,UniRef:UniRef100_Q5HFR9,UniRef:UniRef50_Q49XV0,UniRef:UniRef90_Q99TZ0;ec_number=1.5.1.2
contig_1	Pyrodigal	gene	1623719	1624639	.	-	.	ID=GCA000560365_01558_gene;locus_tag=GCA000560365_01558;gene=rnz
contig_1	Pyrodigal	CDS	1623719	1624639	.	-	0	ID=GCA000560365_01558;Name=ribonuclease Z;locus_tag=GCA000560365_01558;product=ribonuclease Z;Dbxref=GO:0008270,GO:0016891,GO:0042780,GO:0042781;gene=rnz;Parent=GCA000560365_01558_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1234,COG:J,RefSeq:WP_000454064.1,SO:0001217,UniParc:UPI0000054300,UniRef:UniRef100_Q2FY67,UniRef:UniRef50_Q2FY67,UniRef:UniRef90_Q2FY67;ec_number=3.1.26.11
contig_1	Pyrodigal	gene	1624952	1626436	.	+	.	ID=GCA000560365_01559_gene;locus_tag=GCA000560365_01559;gene=zwf
contig_1	Pyrodigal	CDS	1624952	1626436	.	+	0	ID=GCA000560365_01559;Name=glucose-6-phosphate dehydrogenase;locus_tag=GCA000560365_01559;product=glucose-6-phosphate dehydrogenase;Dbxref=GO:0004345,GO:0006006,GO:0006098,GO:0016614,GO:0050661;gene=zwf;Parent=GCA000560365_01559_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0364,COG:G,RefSeq:WP_000105070.1,SO:0001217,UniParc:UPI00000D771A,UniRef:UniRef100_Q2FY66,UniRef:UniRef50_Q5HP46,UniRef:UniRef90_Q5HP46;ec_number=1.1.1.49
contig_1	Pyrodigal	gene	1626666	1627532	.	+	.	ID=GCA000560365_01560_gene;locus_tag=GCA000560365_01560;gene=araC
contig_1	Pyrodigal	CDS	1626666	1627532	.	+	0	ID=GCA000560365_01560;Name=HTH araC/xylS-type domain-containing protein;locus_tag=GCA000560365_01560;product=HTH araC/xylS-type domain-containing protein;gene=araC;Parent=GCA000560365_01560_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2207,COG:K,RefSeq:WP_000382585.1,SO:0001217,UniParc:UPI00000CAA4E,UniRef:UniRef100_A0A7Z7QZU6,UniRef:UniRef50_Q2FY65,UniRef:UniRef90_Q2FY65
contig_1	Pyrodigal	gene	1627615	1629264	.	-	.	ID=GCA000560365_01561_gene;locus_tag=GCA000560365_01561;gene=amyA
contig_1	Pyrodigal	CDS	1627615	1629264	.	-	0	ID=GCA000560365_01561;Name=Alpha-amylase;locus_tag=GCA000560365_01561;product=Alpha-amylase;gene=amyA;Parent=GCA000560365_01561_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0366,COG:G,RefSeq:WP_001041911.1,SO:0001217,UniParc:UPI00000542FC,UniRef:UniRef100_Q2FY64,UniRef:UniRef50_O05242,UniRef:UniRef90_A0A7Z7QZR5
contig_1	Pyrodigal	gene	1629280	1630299	.	-	.	ID=GCA000560365_01562_gene;locus_tag=GCA000560365_01562;gene=purR
contig_1	Pyrodigal	CDS	1629280	1630299	.	-	0	ID=GCA000560365_01562;Name=Transcriptional regulator%2C putative;locus_tag=GCA000560365_01562;product=Transcriptional regulator%2C putative;gene=purR;Parent=GCA000560365_01562_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1609,COG:K,RefSeq:WP_000256338.1,SO:0001217,UniParc:UPI00000542FB,UniRef:UniRef100_Q2FY63,UniRef:UniRef50_Q2FY63,UniRef:UniRef90_Q2FY63
contig_1	Pyrodigal	gene	1630493	1630864	.	-	.	ID=GCA000560365_01563_gene;locus_tag=GCA000560365_01563;gene=gloA
contig_1	Pyrodigal	CDS	1630493	1630864	.	-	0	ID=GCA000560365_01563;Name=Glyoxalase;locus_tag=GCA000560365_01563;product=Glyoxalase;gene=gloA;Parent=GCA000560365_01563_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0346,COG:Q,RefSeq:WP_000413437.1,SO:0001217,UniParc:UPI00000542FA,UniRef:UniRef100_Q2FY61,UniRef:UniRef50_A0A090M013,UniRef:UniRef90_A0A090M013
contig_1	Pyrodigal	gene	1631083	1632489	.	-	.	ID=GCA000560365_01564_gene;locus_tag=GCA000560365_01564;gene=gndA
contig_1	Pyrodigal	CDS	1631083	1632489	.	-	0	ID=GCA000560365_01564;Name=NADP-dependent phosphogluconate dehydrogenase;locus_tag=GCA000560365_01564;product=NADP-dependent phosphogluconate dehydrogenase;Dbxref=GO:0004616,GO:0006098,GO:0016054,GO:0019521,GO:0050661;gene=gndA;Parent=GCA000560365_01564_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0362,COG:G,KEGG:K00033,RefSeq:WP_000193707.1,SO:0001217,UniParc:UPI00000542F9,UniRef:UniRef100_Q5HFR2,UniRef:UniRef50_P00350,UniRef:UniRef90_Q931R3;ec_number=1.1.1.44
contig_1	Pyrodigal	gene	1632557	1633690	.	-	.	ID=GCA000560365_01565_gene;locus_tag=GCA000560365_01565;gene=pepD2
contig_1	Pyrodigal	CDS	1632557	1633690	.	-	0	ID=GCA000560365_01565;Name=M20/M25/M40 family metallo-hydrolase;locus_tag=GCA000560365_01565;product=M20/M25/M40 family metallo-hydrolase;gene=pepD2;Parent=GCA000560365_01565_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2195,COG:E,KEGG:K01258,RefSeq:WP_000606676.1,SO:0001217,UniParc:UPI00004B5C01,UniRef:UniRef100_A0A0D6HL17,UniRef:UniRef50_A0A380G6E1,UniRef:UniRef90_A0A0D6HL17;ec_number=3.4.11.4
contig_1	Pyrodigal	gene	1634040	1634132	.	+	.	ID=GCA000560365_01566_gene;locus_tag=GCA000560365_01566;gene=prli42
contig_1	Pyrodigal	CDS	1634040	1634132	.	+	0	ID=GCA000560365_01566;Name=stressosome-associated protein Prli42;locus_tag=GCA000560365_01566;product=stressosome-associated protein Prli42;gene=prli42;Parent=GCA000560365_01566_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001180311.1,SO:0001217,UniParc:UPI0001573141,UniRef:UniRef100_Q2FY58,UniRef:UniRef50_Q2FY58,UniRef:UniRef90_Q2FY58
contig_1	Pyrodigal	gene	1634259	1635239	.	-	.	ID=GCA000560365_01567_gene;locus_tag=GCA000560365_01567;gene=ygaE
contig_1	Pyrodigal	CDS	1634259	1635239	.	-	0	ID=GCA000560365_01567;Name=Putative membrane protein;locus_tag=GCA000560365_01567;product=Putative membrane protein;gene=ygaE;Parent=GCA000560365_01567_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4129,COG:S,RefSeq:WP_000916195.1,SO:0001217,UniParc:UPI00000542F4,UniRef:UniRef100_X5EEY9,UniRef:UniRef50_Q49XV8,UniRef:UniRef90_A0A7U7JUT7
contig_1	Pyrodigal	gene	1635253	1635690	.	-	.	ID=GCA000560365_01568_gene;locus_tag=GCA000560365_01568
contig_1	Pyrodigal	CDS	1635253	1635690	.	-	0	ID=GCA000560365_01568;Name=Bacilliredoxin SAR1592;locus_tag=GCA000560365_01568;product=Bacilliredoxin SAR1592;Dbxref=GO:0045454;Parent=GCA000560365_01568_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K26958,RefSeq:WP_000367419.1,SO:0001217,UniParc:UPI00000D76F9,UniRef:UniRef100_Q2FY55,UniRef:UniRef50_Q2FY55,UniRef:UniRef90_Q2FY55
contig_1	Pyrodigal	gene	1636041	1637315	.	-	.	ID=GCA000560365_01569_gene;locus_tag=GCA000560365_01569;gene=aceF
contig_1	Pyrodigal	CDS	1636041	1637315	.	-	0	ID=GCA000560365_01569;Name=Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex;locus_tag=GCA000560365_01569;product=Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex;gene=aceF;Parent=GCA000560365_01569_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0508,RefSeq:WP_000406842.1,SO:0001217,UniParc:UPI0000696C50,UniRef:UniRef100_A0A5A8VMR8,UniRef:UniRef50_P37942,UniRef:UniRef90_A0A0U1MLL2
contig_1	Pyrodigal	gene	1637328	1638311	.	-	.	ID=GCA000560365_01570_gene;locus_tag=GCA000560365_01570;gene=acoB
contig_1	Pyrodigal	CDS	1637328	1638311	.	-	0	ID=GCA000560365_01570;Name=Pyruvate dehydrogenase E1 component subunit beta;locus_tag=GCA000560365_01570;product=Pyruvate dehydrogenase E1 component subunit beta;gene=acoB;Parent=GCA000560365_01570_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0022,RefSeq:WP_001096642.1,SO:0001217,UniParc:UPI00000542F1,UniRef:UniRef100_Q2FY53,UniRef:UniRef50_P37941,UniRef:UniRef90_Q2FY53
contig_1	Pyrodigal	gene	1638311	1639303	.	-	.	ID=GCA000560365_01571_gene;locus_tag=GCA000560365_01571;gene=acoA
contig_1	Pyrodigal	CDS	1638311	1639303	.	-	0	ID=GCA000560365_01571;Name=2-oxoisovalerate dehydrogenase subunit alpha;locus_tag=GCA000560365_01571;product=2-oxoisovalerate dehydrogenase subunit alpha;gene=acoA;Parent=GCA000560365_01571_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1071,RefSeq:WP_000568353.1,SO:0001217,UniParc:UPI00000542F0,UniRef:UniRef100_Q2FY52,UniRef:UniRef50_A0A085UCJ1,UniRef:UniRef90_A0A2Y2J981
contig_1	Pyrodigal	gene	1639319	1640740	.	-	.	ID=GCA000560365_01572_gene;locus_tag=GCA000560365_01572;gene=lpdA
contig_1	Pyrodigal	CDS	1639319	1640740	.	-	0	ID=GCA000560365_01572;Name=dihydrolipoyl dehydrogenase;locus_tag=GCA000560365_01572;product=dihydrolipoyl dehydrogenase;Dbxref=GO:0004148,GO:0050660;gene=lpdA;Parent=GCA000560365_01572_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1249,KEGG:K00382,RefSeq:WP_001291535.1,SO:0001217,UniParc:UPI00000542EF,UniRef:UniRef100_Q2FY51,UniRef:UniRef50_A0A0U1MLM9,UniRef:UniRef90_A0A0U1MLM9;ec_number=1.8.1.4
contig_1	Pyrodigal	gene	1640891	1642570	.	-	.	ID=GCA000560365_01573_gene;locus_tag=GCA000560365_01573;gene=recN
contig_1	Pyrodigal	CDS	1640891	1642570	.	-	0	ID=GCA000560365_01573;Name=DNA repair protein RecN;locus_tag=GCA000560365_01573;product=DNA repair protein RecN;Dbxref=GO:0005524,GO:0006281,GO:0006310;gene=recN;Parent=GCA000560365_01573_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0497,COG:L,RefSeq:WP_000942211.1,SO:0001217,UniParc:UPI00000D9E4A,UniRef:UniRef100_A0A0D3Q7N8,UniRef:UniRef50_B9E6Q3,UniRef:UniRef90_A0A0D3Q7N8
contig_1	Pyrodigal	gene	1642586	1643038	.	-	.	ID=GCA000560365_01574_gene;locus_tag=GCA000560365_01574;gene=ahrC
contig_1	Pyrodigal	CDS	1642586	1643038	.	-	0	ID=GCA000560365_01574;Name=transcriptional regulator AhrC/ArgR;locus_tag=GCA000560365_01574;product=transcriptional regulator AhrC/ArgR;Dbxref=GO:0003677,GO:0003700,GO:0005737,GO:0006355,GO:0006526,GO:0034618,GO:0051259,GO:1900079;gene=ahrC;Parent=GCA000560365_01574_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1438,COG:K,KEGG:K03402,RefSeq:WP_001124985.1,SO:0001217,UniParc:UPI00000D783E,UniRef:UniRef100_Q2FY49,UniRef:UniRef50_P17893,UniRef:UniRef90_Q2FY49
contig_1	Pyrodigal	gene	1643470	1644351	.	-	.	ID=GCA000560365_01575_gene;locus_tag=GCA000560365_01575;gene=ispA
contig_1	Pyrodigal	CDS	1643470	1644351	.	-	0	ID=GCA000560365_01575;Name=Geranyltranstransferase%2C putative;locus_tag=GCA000560365_01575;product=Geranyltranstransferase%2C putative;gene=ispA;Parent=GCA000560365_01575_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0142,COG:H,RefSeq:WP_000183378.1,SO:0001217,UniParc:UPI00000542EB,UniRef:UniRef100_Q2FY48,UniRef:UniRef50_A0A4U9TB05,UniRef:UniRef90_Q2FY48
contig_1	Pyrodigal	gene	1644329	1644559	.	-	.	ID=GCA000560365_01576_gene;locus_tag=GCA000560365_01576;gene=xseB
contig_1	Pyrodigal	CDS	1644329	1644559	.	-	0	ID=GCA000560365_01576;Name=exodeoxyribonuclease VII small subunit;locus_tag=GCA000560365_01576;product=exodeoxyribonuclease VII small subunit;Dbxref=GO:0005829,GO:0006308,GO:0008855,GO:0009318;gene=xseB;Parent=GCA000560365_01576_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1722,COG:L,RefSeq:WP_000159865.1,SO:0001217,UniParc:UPI00000542EA,UniRef:UniRef100_Q2FY47,UniRef:UniRef50_Q2FY47,UniRef:UniRef90_Q2FY47;ec_number=3.1.11.6
contig_1	Pyrodigal	gene	1644552	1645889	.	-	.	ID=GCA000560365_01577_gene;locus_tag=GCA000560365_01577;gene=xseA
contig_1	Pyrodigal	CDS	1644552	1645889	.	-	0	ID=GCA000560365_01577;Name=exodeoxyribonuclease VII large subunit;locus_tag=GCA000560365_01577;product=exodeoxyribonuclease VII large subunit;Dbxref=GO:0003676,GO:0005737,GO:0006308,GO:0008855,GO:0009318;gene=xseA;Parent=GCA000560365_01577_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1570,COG:L,KEGG:K03601,RefSeq:WP_001286928.1,SO:0001217,UniParc:UPI00000542E9,UniRef:UniRef100_Q2FY46,UniRef:UniRef50_Q2FY46,UniRef:UniRef90_Q2FY46;ec_number=3.1.11.6
contig_1	Pyrodigal	gene	1645906	1646295	.	-	.	ID=GCA000560365_01578_gene;locus_tag=GCA000560365_01578;gene=nusB
contig_1	Pyrodigal	CDS	1645906	1646295	.	-	0	ID=GCA000560365_01578;Name=transcription antitermination factor NusB;locus_tag=GCA000560365_01578;product=transcription antitermination factor NusB;Dbxref=GO:0003723,GO:0005829,GO:0006353,GO:0031564;gene=nusB;Parent=GCA000560365_01578_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0781,COG:K,KEGG:K03625,RefSeq:WP_000087388.1,SO:0001217,UniParc:UPI0000696C51,UniRef:UniRef100_Q2FGK9,UniRef:UniRef50_Q2FY45,UniRef:UniRef90_Q2FY45
contig_1	Pyrodigal	gene	1646355	1646717	.	-	.	ID=GCA000560365_01579_gene;locus_tag=GCA000560365_01579;gene=yloU
contig_1	Pyrodigal	CDS	1646355	1646717	.	-	0	ID=GCA000560365_01579;Name=putative conserved protein YloU%2C alkaline shock protein (Asp23) family;locus_tag=GCA000560365_01579;product=putative conserved protein YloU%2C alkaline shock protein (Asp23) family;gene=yloU;Parent=GCA000560365_01579_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1302,COG:S,RefSeq:WP_000241588.1,SO:0001217,UniParc:UPI00000542E7,UniRef:UniRef100_Q2FY44,UniRef:UniRef50_A0A853V4U3,UniRef:UniRef90_Q2FY44
contig_1	Pyrodigal	gene	1646732	1648087	.	-	.	ID=GCA000560365_01580_gene;locus_tag=GCA000560365_01580;gene=accC
contig_1	Pyrodigal	CDS	1646732	1648087	.	-	0	ID=GCA000560365_01580;Name=acetyl-CoA carboxylase biotin carboxylase subunit;locus_tag=GCA000560365_01580;product=acetyl-CoA carboxylase biotin carboxylase subunit;Dbxref=GO:0004075,GO:0009317,GO:0016874;gene=accC;Parent=GCA000560365_01580_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4770,COG:I,RefSeq:WP_000756612.1,SO:0001217,UniParc:UPI00000542E6,UniRef:UniRef100_Q2FY43,UniRef:UniRef50_A0A0U1E6Z3,UniRef:UniRef90_A0A0Y9APZ0;ec_number=6.3.4.14
contig_1	Pyrodigal	gene	1648087	1648551	.	-	.	ID=GCA000560365_01581_gene;locus_tag=GCA000560365_01581;gene=accB
contig_1	Pyrodigal	CDS	1648087	1648551	.	-	0	ID=GCA000560365_01581;Name=acetyl-CoA carboxylase biotin carboxyl carrier protein;locus_tag=GCA000560365_01581;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;Dbxref=GO:0003989,GO:0006633,GO:0009317;gene=accB;Parent=GCA000560365_01581_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0511,COG:I,RefSeq:WP_001009516.1,SO:0001217,UniParc:UPI00000542E5,UniRef:UniRef100_Q2FY42,UniRef:UniRef50_A0A090LU16,UniRef:UniRef90_A0A090LU16;ec_number=6.4.1.2
contig_1	Pyrodigal	gene	1649025	1649582	.	-	.	ID=GCA000560365_01582_gene;locus_tag=GCA000560365_01582;gene=efp
contig_1	Pyrodigal	CDS	1649025	1649582	.	-	0	ID=GCA000560365_01582;Name=elongation factor P;locus_tag=GCA000560365_01582;product=elongation factor P;Dbxref=GO:0003746,GO:0005737,GO:0006414,GO:0043043;gene=efp;Parent=GCA000560365_01582_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0231,COG:J,KEGG:K02356,RefSeq:WP_000626504.1,SO:0001217,UniParc:UPI00000542E4,UniRef:UniRef100_Q2FY41,UniRef:UniRef50_Q2FY41,UniRef:UniRef90_Q2FY41
contig_1	Pyrodigal	gene	1649608	1650669	.	-	.	ID=GCA000560365_01583_gene;locus_tag=GCA000560365_01583;gene=pepP
contig_1	Pyrodigal	CDS	1649608	1650669	.	-	0	ID=GCA000560365_01583;Name=Aminopeptidase P family protein;locus_tag=GCA000560365_01583;product=Aminopeptidase P family protein;gene=pepP;Parent=GCA000560365_01583_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0006,COG:E,KEGG:K01262,RefSeq:WP_000087107.1,SO:0001217,UniParc:UPI00004B5C0D,UniRef:UniRef100_Q2FY40,UniRef:UniRef50_A0A0D6XTL2,UniRef:UniRef90_A0A2K4AGC7;ec_number=3.4.11.9
contig_1	Pyrodigal	gene	1650774	1651355	.	+	.	ID=GCA000560365_01584_gene;locus_tag=GCA000560365_01584
contig_1	Pyrodigal	CDS	1650774	1651355	.	+	0	ID=GCA000560365_01584;Name=Lipoprotein;locus_tag=GCA000560365_01584;product=Lipoprotein;Parent=GCA000560365_01584_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000737686.1,SO:0001217,UniParc:UPI00000542E2,UniRef:UniRef100_Q2FY39,UniRef:UniRef50_A0A1J3ZXK3,UniRef:UniRef90_Q2FY39
contig_1	Pyrodigal	gene	1651369	1651587	.	+	.	ID=GCA000560365_01585_gene;locus_tag=GCA000560365_01585
contig_1	Pyrodigal	CDS	1651369	1651587	.	+	0	ID=GCA000560365_01585;Name=hypothetical protein;locus_tag=GCA000560365_01585;product=hypothetical protein;Parent=GCA000560365_01585_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001244298.1,SO:0001217,UniParc:UPI00000CAA2A,UniRef:UniRef100_Q2FY38,UniRef:UniRef50_Q2FY38,UniRef:UniRef90_Q2FY38
contig_1	Pyrodigal	gene	1651651	1652481	.	-	.	ID=GCA000560365_01586_gene;locus_tag=GCA000560365_01586;gene=lipM
contig_1	Pyrodigal	CDS	1651651	1652481	.	-	0	ID=GCA000560365_01586;Name=Octanoyltransferase LipM;locus_tag=GCA000560365_01586;product=Octanoyltransferase LipM;Dbxref=GO:0009107,GO:0033819;gene=lipM;Parent=GCA000560365_01586_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0095,COG:H,RefSeq:WP_000141108.1,SO:0001217,UniParc:UPI0000696C58,UniRef:UniRef100_A0A0E8GJ70,UniRef:UniRef50_P54511,UniRef:UniRef90_Q2FY37;ec_number=2.3.1.181
contig_1	Pyrodigal	gene	1652639	1653025	.	+	.	ID=GCA000560365_01587_gene;locus_tag=GCA000560365_01587;gene=pspE
contig_1	Pyrodigal	CDS	1652639	1653025	.	+	0	ID=GCA000560365_01587;Name=Rhodanese domain-containing protein;locus_tag=GCA000560365_01587;product=Rhodanese domain-containing protein;gene=pspE;Parent=GCA000560365_01587_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0607,COG:P,RefSeq:WP_001276571.1,SO:0001217,UniParc:UPI00000542DF,UniRef:UniRef100_Q2FY36,UniRef:UniRef50_Q2FY36,UniRef:UniRef90_Q2FY36
contig_1	Pyrodigal	gene	1653390	1654862	.	-	.	ID=GCA000560365_01588_gene;locus_tag=GCA000560365_01588;gene=gcvPB
contig_1	Pyrodigal	CDS	1653390	1654862	.	-	0	ID=GCA000560365_01588;Name=aminomethyl-transferring glycine dehydrogenase subunit GcvPB;locus_tag=GCA000560365_01588;product=aminomethyl-transferring glycine dehydrogenase subunit GcvPB;Dbxref=GO:0004375,GO:0005829,GO:0005960,GO:0006546,GO:0016594,GO:0019464,GO:0030170;gene=gcvPB;Parent=GCA000560365_01588_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1003,COG:E,RefSeq:WP_000202189.1,SO:0001217,UniParc:UPI00000542DE,UniRef:UniRef100_Q2FY35,UniRef:UniRef50_P54377,UniRef:UniRef90_Q2FY35;ec_number=1.4.4.2
contig_1	Pyrodigal	gene	1654855	1656201	.	-	.	ID=GCA000560365_01589_gene;locus_tag=GCA000560365_01589;gene=gcvPA
contig_1	Pyrodigal	CDS	1654855	1656201	.	-	0	ID=GCA000560365_01589;Name=aminomethyl-transferring glycine dehydrogenase subunit GcvPA;locus_tag=GCA000560365_01589;product=aminomethyl-transferring glycine dehydrogenase subunit GcvPA;Dbxref=GO:0004375,GO:0006546,GO:0009116,GO:0019464;gene=gcvPA;Parent=GCA000560365_01589_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0403,COG:E,RefSeq:WP_000019687.1,SO:0001217,UniParc:UPI00000D9E51,UniRef:UniRef100_Q2FY34,UniRef:UniRef50_Q81M07,UniRef:UniRef90_Q2FY34;ec_number=1.4.4.2
contig_1	Pyrodigal	gene	1656221	1657312	.	-	.	ID=GCA000560365_01590_gene;locus_tag=GCA000560365_01590;gene=gcvT
contig_1	Pyrodigal	CDS	1656221	1657312	.	-	0	ID=GCA000560365_01590;Name=glycine cleavage system aminomethyltransferase GcvT;locus_tag=GCA000560365_01590;product=glycine cleavage system aminomethyltransferase GcvT;Dbxref=GO:0004047,GO:0005737,GO:0005829,GO:0005960,GO:0008483,GO:0019464;gene=gcvT;Parent=GCA000560365_01590_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0404,COG:E,RefSeq:WP_000093349.1,SO:0001217,UniParc:UPI00000542DC,UniRef:UniRef100_Q2FY33,UniRef:UniRef50_Q2FY33,UniRef:UniRef90_Q2FY33;ec_number=2.1.2.10
contig_1	Infernal	regulatory_region	1657387	1657484	7.2e-12	-	.	ID=KMHODOBJJH_185;Name=Glycine riboswitch aptamer;product=Glycine riboswitch aptamer;Dbxref=RFAM:RF00504;inference=profile:Rfam:RF00504;Note=SO:0000035;regulatory_class=riboswitch
contig_1	Pyrodigal	gene	1657471	1657995	.	-	.	ID=GCA000560365_01591_gene;locus_tag=GCA000560365_01591;gene=aroK
contig_1	Pyrodigal	CDS	1657471	1657995	.	-	0	ID=GCA000560365_01591;Name=Shikimate kinase;locus_tag=GCA000560365_01591;product=Shikimate kinase;Dbxref=GO:0000287,GO:0004765,GO:0005524,GO:0005829,GO:0008652,GO:0009073,GO:0009423;gene=aroK;Parent=GCA000560365_01591_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0703,COG:E,RefSeq:WP_001015117.1,SO:0001217,UniParc:UPI00000542DB,UniRef:UniRef100_Q2FY32,UniRef:UniRef50_Q2FY32,UniRef:UniRef90_Q2FY32;ec_number=2.7.1.71
contig_1	Pyrodigal	gene	1658228	1658602	.	-	.	ID=GCA000560365_01592_gene;locus_tag=GCA000560365_01592
contig_1	Pyrodigal	CDS	1658228	1658602	.	-	0	ID=GCA000560365_01592;Name=Competence ComGF-like protein;locus_tag=GCA000560365_01592;product=Competence ComGF-like protein;Parent=GCA000560365_01592_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000069AACC,UniRef:UniRef100_Q2G2I9,UniRef:UniRef50_A0A2X4YB59,UniRef:UniRef90_Q2G2I9
contig_1	Pyrodigal	gene	1658643	1658942	.	-	.	ID=GCA000560365_01593_gene;locus_tag=GCA000560365_01593
contig_1	Pyrodigal	CDS	1658643	1658942	.	-	0	ID=GCA000560365_01593;Name=Competence protein ComGE;locus_tag=GCA000560365_01593;product=Competence protein ComGE;Parent=GCA000560365_01593_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000844413.1,SO:0001217,UniParc:UPI00000542D8,UniRef:UniRef100_Q2G2I8,UniRef:UniRef50_A0A2K4AGD7,UniRef:UniRef90_Q2G2I8
contig_1	Pyrodigal	gene	1658929	1659363	.	-	.	ID=GCA000560365_01594_gene;locus_tag=GCA000560365_01594;gene=comGD
contig_1	Pyrodigal	CDS	1658929	1659363	.	-	0	ID=GCA000560365_01594;Name=competence type IV pilus minor pilin ComGD;locus_tag=GCA000560365_01594;product=competence type IV pilus minor pilin ComGD;gene=comGD;Parent=GCA000560365_01594_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2165,COG:NU,SO:0001217,UniParc:UPI000169833D,UniRef:UniRef100_A0A1S6CR26,UniRef:UniRef50_Q2G2I7,UniRef:UniRef90_Q2G2I7
contig_1	Pyrodigal	gene	1659353	1659664	.	-	.	ID=GCA000560365_01595_gene;locus_tag=GCA000560365_01595;gene=comGC
contig_1	Pyrodigal	CDS	1659353	1659664	.	-	0	ID=GCA000560365_01595;Name=competence type IV pilus major pilin ComGC;locus_tag=GCA000560365_01595;product=competence type IV pilus major pilin ComGC;Dbxref=GO:0030420;gene=comGC;Parent=GCA000560365_01595_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4537,COG:X,RefSeq:WP_000472256.1,SO:0001217,UniParc:UPI00000542D4,UniRef:UniRef100_Q2G2J0,UniRef:UniRef50_A0A380G8S0,UniRef:UniRef90_A0A0U1MLR1
contig_1	Pyrodigal	gene	1659678	1660748	.	-	.	ID=GCA000560365_01596_gene;locus_tag=GCA000560365_01596;gene=comGB
contig_1	Pyrodigal	CDS	1659678	1660748	.	-	0	ID=GCA000560365_01596;Name=competence type IV pilus assembly protein ComGB;locus_tag=GCA000560365_01596;product=competence type IV pilus assembly protein ComGB;gene=comGB;Parent=GCA000560365_01596_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1459,COG:NU,RefSeq:WP_000775708.1,SO:0001217,UniParc:UPI00004B5C10,UniRef:UniRef100_Q2G2I6,UniRef:UniRef50_Q2G2I6,UniRef:UniRef90_Q2G2I6
contig_1	Pyrodigal	gene	1660720	1661694	.	-	.	ID=GCA000560365_01597_gene;locus_tag=GCA000560365_01597;gene=comGA
contig_1	Pyrodigal	CDS	1660720	1661694	.	-	0	ID=GCA000560365_01597;Name=competence type IV pilus ATPase ComGA;locus_tag=GCA000560365_01597;product=competence type IV pilus ATPase ComGA;gene=comGA;Parent=GCA000560365_01597_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2804,COG:NU,RefSeq:WP_000697228.1,SO:0001217,UniParc:UPI00004B5C11,UniRef:UniRef100_Q2FY30,UniRef:UniRef50_Q2FY30,UniRef:UniRef90_Q2FY30
contig_1	Pyrodigal	gene	1661746	1662369	.	-	.	ID=GCA000560365_01598_gene;locus_tag=GCA000560365_01598;gene=gloB
contig_1	Pyrodigal	CDS	1661746	1662369	.	-	0	ID=GCA000560365_01598;Name=Metallo-beta-lactamase domain-containing protein;locus_tag=GCA000560365_01598;product=Metallo-beta-lactamase domain-containing protein;gene=gloB;Parent=GCA000560365_01598_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0491,COG:R,RefSeq:WP_001223008.1,SO:0001217,UniParc:UPI00000542D1,UniRef:UniRef100_Q2FY29,UniRef:UniRef50_Q2FY29,UniRef:UniRef90_Q2FY29
contig_1	Pyrodigal	gene	1662366	1662695	.	-	.	ID=GCA000560365_01599_gene;locus_tag=GCA000560365_01599;gene=yqgV
contig_1	Pyrodigal	CDS	1662366	1662695	.	-	0	ID=GCA000560365_01599;Name=Thiamine-binding protein domain-containing protein;locus_tag=GCA000560365_01599;product=Thiamine-binding protein domain-containing protein;gene=yqgV;Parent=GCA000560365_01599_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0011,COG:H,RefSeq:WP_001018871.1,SO:0001217,UniParc:UPI00000542D0,UniRef:UniRef100_Q2FY28,UniRef:UniRef50_Q56200,UniRef:UniRef90_A0A7U7JUV1
contig_1	Pyrodigal	gene	1662695	1663681	.	-	.	ID=GCA000560365_01600_gene;locus_tag=GCA000560365_01600;gene=nagC
contig_1	Pyrodigal	CDS	1662695	1663681	.	-	0	ID=GCA000560365_01600;Name=Glucokinase;locus_tag=GCA000560365_01600;product=Glucokinase;gene=nagC;Parent=GCA000560365_01600_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1940,COG:GK,RefSeq:WP_000161314.1,SO:0001217,UniParc:UPI00000542CF,UniRef:UniRef100_Q2FY27,UniRef:UniRef50_Q56198,UniRef:UniRef90_A0A7U7JUV0
contig_1	Pyrodigal	gene	1663862	1665325	.	-	.	ID=GCA000560365_01601_gene;locus_tag=GCA000560365_01601;gene=glpG
contig_1	Pyrodigal	CDS	1663862	1665325	.	-	0	ID=GCA000560365_01601;Name=Membrane peptidase%2C contains TPR repeat domain;locus_tag=GCA000560365_01601;product=Membrane peptidase%2C contains TPR repeat domain;gene=glpG;Parent=GCA000560365_01601_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0705,COG:O,KEGG:K19225,RefSeq:WP_031808149.1,SO:0001217,UniParc:UPI00044DED1F,UniRef:UniRef100_UPI00044DED1F,UniRef:UniRef50_A0A4U9T9N5,UniRef:UniRef90_A0A6B5H1W4;ec_number=3.4.21.105
contig_1	Pyrodigal	gene	1665337	1665930	.	-	.	ID=GCA000560365_01602_gene;locus_tag=GCA000560365_01602;gene=fAU1
contig_1	Pyrodigal	CDS	1665337	1665930	.	-	0	ID=GCA000560365_01602;Name=5-formyltetrahydrofolate cyclo-ligase;locus_tag=GCA000560365_01602;product=5-formyltetrahydrofolate cyclo-ligase;Dbxref=GO:0006730,GO:0030272;gene=fAU1;Parent=GCA000560365_01602_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0212,COG:H,SO:0001217,UniParc:UPI00000542CA,UniRef:UniRef100_A0A0D6HL28,UniRef:UniRef50_Q2FY23,UniRef:UniRef90_Q2FY23;ec_number=6.3.3.2
contig_1	Pyrodigal	gene	1666085	1666234	.	-	.	ID=GCA000560365_01603_gene;locus_tag=GCA000560365_01603;gene=rpmG
contig_1	Pyrodigal	CDS	1666085	1666234	.	-	0	ID=GCA000560365_01603;Name=50S ribosomal protein L33;locus_tag=GCA000560365_01603;product=50S ribosomal protein L33;Dbxref=GO:0003735,GO:0005737,GO:0005840,GO:0006412,GO:1990904;gene=rpmG;Parent=GCA000560365_01603_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0267,COG:J,KEGG:K02913,RefSeq:WP_001265709.1,SO:0001217,UniParc:UPI00000542C9,UniRef:UniRef100_Q2FY22,UniRef:UniRef50_Q5HNZ8,UniRef:UniRef90_Q5HNZ8
contig_1	Pyrodigal	gene	1666347	1668422	.	-	.	ID=GCA000560365_01604_gene;locus_tag=GCA000560365_01604;gene=ftsI
contig_1	Pyrodigal	CDS	1666347	1668422	.	-	0	ID=GCA000560365_01604;Name=Putative penicillin-binding protein;locus_tag=GCA000560365_01604;product=Putative penicillin-binding protein;gene=ftsI;Parent=GCA000560365_01604_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0768,COG:DM,KEGG:K12553,RefSeq:WP_000919754.1,SO:0001217,UniParc:UPI0000696C5A,UniRef:UniRef100_A0A5A8VNY1,UniRef:UniRef50_P83331,UniRef:UniRef90_P83331;ec_number=3.4.-.-
contig_1	Pyrodigal	gene	1668543	1669142	.	-	.	ID=GCA000560365_01605_gene;locus_tag=GCA000560365_01605;gene=sodA
contig_1	Pyrodigal	CDS	1668543	1669142	.	-	0	ID=GCA000560365_01605;Name=Superoxide dismutase [Mn/Fe] 1;locus_tag=GCA000560365_01605;product=Superoxide dismutase [Mn/Fe] 1;Dbxref=GO:0004784,GO:0005737,GO:0046872;gene=sodA;Parent=GCA000560365_01605_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0605,COG:P,KEGG:K04564,RefSeq:WP_000863556.1,SO:0001217,UniParc:UPI00000542C7,UniRef:UniRef100_P0A0J3,UniRef:UniRef50_Q9K4V3,UniRef:UniRef90_P0A0J3;ec_number=1.15.1.1
contig_1	Pyrodigal	gene	1669419	1669829	.	-	.	ID=GCA000560365_01606_gene;locus_tag=GCA000560365_01606;gene=fur
contig_1	Pyrodigal	CDS	1669419	1669829	.	-	0	ID=GCA000560365_01606;Name=Ferric uptake regulation protein;locus_tag=GCA000560365_01606;product=Ferric uptake regulation protein;Dbxref=GO:0000976,GO:0003700,GO:0005737,GO:0008270,GO:0045892,GO:1900376;gene=fur;Parent=GCA000560365_01606_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0735,COG:P,KEGG:K02076,RefSeq:WP_001095260.1,SO:0001217,UniParc:UPI00000542C6,UniRef:UniRef100_Q2FY19,UniRef:UniRef50_Q2FY19,UniRef:UniRef90_Q2FY19
contig_1	Pyrodigal	gene	1669816	1670688	.	-	.	ID=GCA000560365_01607_gene;locus_tag=GCA000560365_01607;gene=znuB
contig_1	Pyrodigal	CDS	1669816	1670688	.	-	0	ID=GCA000560365_01607;Name=Metal ABC transporter permease;locus_tag=GCA000560365_01607;product=Metal ABC transporter permease;gene=znuB;Parent=GCA000560365_01607_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1108,COG:P,SO:0001217,UniParc:UPI00005FE533,UniRef:UniRef100_A0A7Z7W1S3,UniRef:UniRef50_Q2FY18,UniRef:UniRef90_Q2FY18
contig_1	Pyrodigal	gene	1670721	1671506	.	-	.	ID=GCA000560365_01608_gene;locus_tag=GCA000560365_01608;gene=znuC
contig_1	Pyrodigal	CDS	1670721	1671506	.	-	0	ID=GCA000560365_01608;Name=ABC transporter%2C putative;locus_tag=GCA000560365_01608;product=ABC transporter%2C putative;gene=znuC;Parent=GCA000560365_01608_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1121,COG:P,RefSeq:WP_001213908.1,SO:0001217,UniParc:UPI00000542C4,UniRef:UniRef100_Q2FY17,UniRef:UniRef50_A0A1W7AC50,UniRef:UniRef90_Q2FY17
contig_1	Pyrodigal	gene	1671632	1672522	.	-	.	ID=GCA000560365_01609_gene;locus_tag=GCA000560365_01609;gene=nfo
contig_1	Pyrodigal	CDS	1671632	1672522	.	-	0	ID=GCA000560365_01609;Name=deoxyribonuclease IV;locus_tag=GCA000560365_01609;product=deoxyribonuclease IV;Dbxref=GO:0003677,GO:0003906,GO:0006281,GO:0006284,GO:0008081,GO:0008270,GO:0008833;gene=nfo;Parent=GCA000560365_01609_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0648,COG:L,RefSeq:WP_000924214.1,SO:0001217,UniParc:UPI00004B5C13,UniRef:UniRef100_Q2FY16,UniRef:UniRef50_Q2FY16,UniRef:UniRef90_Q2FY16;ec_number=3.1.21.2
contig_1	Pyrodigal	gene	1672532	1673878	.	-	.	ID=GCA000560365_01610_gene;locus_tag=GCA000560365_01610;gene=cshB
contig_1	Pyrodigal	CDS	1672532	1673878	.	-	0	ID=GCA000560365_01610;Name=DEAD-box ATP-dependent RNA helicase CshB;locus_tag=GCA000560365_01610;product=DEAD-box ATP-dependent RNA helicase CshB;Dbxref=GO:0003689,GO:0003724,GO:0005524,GO:0005829,GO:0006401,GO:0009409,GO:0016887,GO:0033592,GO:0061775,GO:0140584,GO:0140665,GO:0140849;gene=cshB;Parent=GCA000560365_01610_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0513,COG:L,RefSeq:WP_001062180.1,SO:0001217,UniParc:UPI00000542C2,UniRef:UniRef100_Q2FY15,UniRef:UniRef50_Q2FY15,UniRef:UniRef90_Q2FY15;ec_number=3.6.4.13
contig_1	Pyrodigal	gene	1673992	1675092	.	-	.	ID=GCA000560365_01611_gene;locus_tag=GCA000560365_01611;gene=nIF3
contig_1	Pyrodigal	CDS	1673992	1675092	.	-	0	ID=GCA000560365_01611;Name=Nif3-like dinuclear metal center hexameric protein;locus_tag=GCA000560365_01611;product=Nif3-like dinuclear metal center hexameric protein;Dbxref=GO:0005737,GO:0046872,GO:0051540;gene=nIF3;Parent=GCA000560365_01611_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0327,COG:H,KEGG:K22391,RefSeq:WP_000683931.1,SO:0001217,UniParc:UPI00000542C1,UniRef:UniRef100_Q5HFK1,UniRef:UniRef50_P67272,UniRef:UniRef90_P67272;ec_number=3.5.4.16
contig_1	Pyrodigal	gene	1675095	1675772	.	-	.	ID=GCA000560365_01612_gene;locus_tag=GCA000560365_01612;gene=trmK
contig_1	Pyrodigal	CDS	1675095	1675772	.	-	0	ID=GCA000560365_01612;Name=tRNA-m1A22 methylase;locus_tag=GCA000560365_01612;product=tRNA-m1A22 methylase;gene=trmK;Parent=GCA000560365_01612_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2384,COG:J,KEGG:K06967,RefSeq:WP_000624584.1,SO:0001217,UniParc:UPI00000542C0,UniRef:UniRef100_Q2FY13,UniRef:UniRef50_A0A239Z5U5,UniRef:UniRef90_A0A2X2M890;ec_number=2.1.1.217
contig_1	Pyrodigal	gene	1675903	1677009	.	-	.	ID=GCA000560365_01613_gene;locus_tag=GCA000560365_01613;gene=rpoD
contig_1	Pyrodigal	CDS	1675903	1677009	.	-	0	ID=GCA000560365_01613;Name=RNA polymerase sigma factor RpoD;locus_tag=GCA000560365_01613;product=RNA polymerase sigma factor RpoD;Dbxref=GO:0003677,GO:0005737,GO:0006352,GO:0006355,GO:0016987;gene=rpoD;Parent=GCA000560365_01613_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0568,COG:K,KEGG:K03086,RefSeq:WP_001283055.1,SO:0001217,UniParc:UPI00000542BF,UniRef:UniRef100_P0A0J0,UniRef:UniRef50_P0A0J0,UniRef:UniRef90_P0A0J0
contig_1	Pyrodigal	gene	1677233	1679032	.	-	.	ID=GCA000560365_01614_gene;locus_tag=GCA000560365_01614;gene=dnaG
contig_1	Pyrodigal	CDS	1677233	1679032	.	-	0	ID=GCA000560365_01614;Name=DNA primase;locus_tag=GCA000560365_01614;product=DNA primase;Dbxref=GO:0000428,GO:0003677,GO:0003678,GO:0003896,GO:0005524,GO:0005737,GO:0008270,GO:1990077;gene=dnaG;Parent=GCA000560365_01614_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0358,COG:L,KEGG:K02316,RefSeq:WP_001217261.1,SO:0001217,UniParc:UPI000011DD9D,UniRef:UniRef100_Q5HFJ8,UniRef:UniRef50_O05338,UniRef:UniRef90_O05338;ec_number=2.7.7.101
contig_1	Pyrodigal	gene	1679093	1679911	.	-	.	ID=GCA000560365_01615_gene;locus_tag=GCA000560365_01615;gene=ppsR
contig_1	Pyrodigal	CDS	1679093	1679911	.	-	0	ID=GCA000560365_01615;Name=Putative pyruvate%2C phosphate dikinase regulatory protein;locus_tag=GCA000560365_01615;product=Putative pyruvate%2C phosphate dikinase regulatory protein;Dbxref=GO:0004674,GO:0005524,GO:0016776,GO:0043531;gene=ppsR;Parent=GCA000560365_01615_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1806,COG:T,RefSeq:WP_000411299.1,SO:0001217,UniParc:UPI00000542BE,UniRef:UniRef100_Q2FY10,UniRef:UniRef50_Q2FY10,UniRef:UniRef90_Q2FY10;ec_number=2.7.4.27
contig_1	Pyrodigal	gene	1679922	1680461	.	-	.	ID=GCA000560365_01616_gene;locus_tag=GCA000560365_01616;gene=glpR
contig_1	Pyrodigal	CDS	1679922	1680461	.	-	0	ID=GCA000560365_01616;Name=CBS domain-containing protein;locus_tag=GCA000560365_01616;product=CBS domain-containing protein;gene=glpR;Parent=GCA000560365_01616_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1349,COG:KG,RefSeq:WP_001054797.1,SO:0001217,UniParc:UPI00004B5C15,UniRef:UniRef100_Q2FY09,UniRef:UniRef50_O34994,UniRef:UniRef90_A0A7U7JV00
contig_1	Pyrodigal	gene	1680880	1682271	.	+	.	ID=GCA000560365_01617_gene;locus_tag=GCA000560365_01617;gene=glyQS
contig_1	Pyrodigal	CDS	1680880	1682271	.	+	0	ID=GCA000560365_01617;Name=glycine--tRNA ligase;locus_tag=GCA000560365_01617;product=glycine--tRNA ligase;Dbxref=GO:0000166,GO:0004820,GO:0005524,GO:0005737,GO:0006426,GO:0016740,GO:0046983;gene=glyQS;Parent=GCA000560365_01617_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0423,COG:J,KEGG:K01880,RefSeq:WP_001030080.1,SO:0001217,UniParc:UPI000002E8EC,UniRef:UniRef100_Q2FY08,UniRef:UniRef50_Q2FY08,UniRef:UniRef90_Q2FY08;ec_number=6.1.1.14
contig_1	Pyrodigal	gene	1682421	1683167	.	-	.	ID=GCA000560365_01618_gene;locus_tag=GCA000560365_01618;gene=recO
contig_1	Pyrodigal	CDS	1682421	1683167	.	-	0	ID=GCA000560365_01618;Name=DNA repair protein RecO;locus_tag=GCA000560365_01618;product=DNA repair protein RecO;Dbxref=GO:0003677,GO:0006281,GO:0006302,GO:0006310,GO:0043590;gene=recO;Parent=GCA000560365_01618_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1381,COG:L,RefSeq:WP_001548963.1,SO:0001217,UniParc:UPI000069AACF,UniRef:UniRef100_Q2FGF7,UniRef:UniRef50_Q49Y09,UniRef:UniRef90_Q2FGF7
contig_1	Pyrodigal	gene	1683195	1684094	.	-	.	ID=GCA000560365_01619_gene;locus_tag=GCA000560365_01619;gene=era
contig_1	Pyrodigal	CDS	1683195	1684094	.	-	0	ID=GCA000560365_01619;Name=GTPase Era;locus_tag=GCA000560365_01619;product=GTPase Era;Dbxref=GO:0000028,GO:0003723,GO:0003924,GO:0005525,GO:0005829,GO:0005886,GO:0043024,GO:0070181;gene=era;Parent=GCA000560365_01619_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1159,COG:J,RefSeq:WP_000134765.1,SO:0001217,UniParc:UPI000012A100,UniRef:UniRef100_Q2FGF6,UniRef:UniRef50_P42182,UniRef:UniRef90_Q2FY06
contig_1	Pyrodigal	gene	1684095	1684499	.	-	.	ID=GCA000560365_01620_gene;locus_tag=GCA000560365_01620;gene=cdd
contig_1	Pyrodigal	CDS	1684095	1684499	.	-	0	ID=GCA000560365_01620;Name=cytidine deaminase;locus_tag=GCA000560365_01620;product=cytidine deaminase;Dbxref=GO:0004126,GO:0005737,GO:0008270,GO:0008655,GO:0009972;gene=cdd;Parent=GCA000560365_01620_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0295,COG:F,KEGG:K01489,RefSeq:WP_000121875.1,SO:0001217,UniParc:UPI00000542B8,UniRef:UniRef100_Q2FY04,UniRef:UniRef50_A0A1W7AC49,UniRef:UniRef90_A0A2K4AGX2;ec_number=3.5.4.5
contig_1	Pyrodigal	gene	1684510	1684854	.	-	.	ID=GCA000560365_01621_gene;locus_tag=GCA000560365_01621;gene=ybeY
contig_1	Pyrodigal	CDS	1684510	1684854	.	-	0	ID=GCA000560365_01621;Name=rRNA maturation RNase YbeY;locus_tag=GCA000560365_01621;product=rRNA maturation RNase YbeY;Dbxref=GO:0004540,GO:0042254,GO:0046872;gene=ybeY;Parent=GCA000560365_01621_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0818,COG:I,RefSeq:WP_000819532.1,SO:0001217,UniParc:UPI00000542B7,UniRef:UniRef100_Q2FY03,UniRef:UniRef50_Q2FY03,UniRef:UniRef90_Q2FY03
contig_1	Pyrodigal	gene	1684857	1685324	.	-	.	ID=GCA000560365_01622_gene;locus_tag=GCA000560365_01622;gene=ybeY
contig_1	Pyrodigal	CDS	1684857	1685324	.	-	0	ID=GCA000560365_01622;Name=rRNA maturation RNase YbeY;locus_tag=GCA000560365_01622;product=rRNA maturation RNase YbeY;Dbxref=GO:0004222,GO:0004521,GO:0004540,GO:0005737,GO:0006364,GO:0008270,GO:0042254,GO:0046872;gene=ybeY;Parent=GCA000560365_01622_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0319,COG:J,RefSeq:WP_000494134.1,SO:0001217,UniParc:UPI000013AD70,UniRef:UniRef100_Q2FY02,UniRef:UniRef50_Q2FY02,UniRef:UniRef90_Q2FY02;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	1685325	1686272	.	-	.	ID=GCA000560365_01623_gene;locus_tag=GCA000560365_01623;gene=phoH
contig_1	Pyrodigal	CDS	1685325	1686272	.	-	0	ID=GCA000560365_01623;Name=PhoH-like protein;locus_tag=GCA000560365_01623;product=PhoH-like protein;gene=phoH;Parent=GCA000560365_01623_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1702,COG:T,KEGG:K06217,RefSeq:WP_001117767.1,SO:0001217,UniParc:UPI00000D7657,UniRef:UniRef100_Q2FY01,UniRef:UniRef50_A0A174T1P7,UniRef:UniRef90_A0A115CVC0
contig_1	Pyrodigal	gene	1686576	1687274	.	-	.	ID=GCA000560365_01624_gene;locus_tag=GCA000560365_01624
contig_1	Pyrodigal	CDS	1686576	1687274	.	-	0	ID=GCA000560365_01624;Name=Iron transporter;locus_tag=GCA000560365_01624;product=Iron transporter;Parent=GCA000560365_01624_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000110603.1,SO:0001217,UniParc:UPI00000542B4,UniRef:UniRef100_Q2FY00,UniRef:UniRef50_Q2FY00,UniRef:UniRef90_Q2FY00
contig_1	Pyrodigal	gene	1687291	1688280	.	-	.	ID=GCA000560365_01625_gene;locus_tag=GCA000560365_01625;gene=floA
contig_1	Pyrodigal	CDS	1687291	1688280	.	-	0	ID=GCA000560365_01625;Name=flotillin-like protein FloA;locus_tag=GCA000560365_01625;product=flotillin-like protein FloA;Dbxref=GO:0005886,GO:0045121;gene=floA;Parent=GCA000560365_01625_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4864,COG:M,RefSeq:WP_000492114.1,SO:0001217,UniParc:UPI00000542B3,UniRef:UniRef100_Q2FXZ9,UniRef:UniRef50_P54466,UniRef:UniRef90_Q49Y16
contig_1	Pyrodigal	gene	1688298	1689005	.	-	.	ID=GCA000560365_01626_gene;locus_tag=GCA000560365_01626;gene=nfeD
contig_1	Pyrodigal	CDS	1688298	1689005	.	-	0	ID=GCA000560365_01626;Name=NfeD-like C-terminal domain-containing protein;locus_tag=GCA000560365_01626;product=NfeD-like C-terminal domain-containing protein;gene=nfeD;Parent=GCA000560365_01626_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1030,COG:O,SO:0001217,UniParc:UPI00000D76DF,UniRef:UniRef100_W8U5J3,UniRef:UniRef50_Q2FXZ8,UniRef:UniRef90_Q2FXZ8
contig_1	Pyrodigal	gene	1689225	1689401	.	-	.	ID=GCA000560365_01627_gene;locus_tag=GCA000560365_01627;gene=rpsU
contig_1	Pyrodigal	CDS	1689225	1689401	.	-	0	ID=GCA000560365_01627;Name=30S ribosomal protein S21;locus_tag=GCA000560365_01627;product=30S ribosomal protein S21;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:1990904;gene=rpsU;Parent=GCA000560365_01627_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0828,COG:J,RefSeq:WP_000048060.1,SO:0001217,UniParc:UPI000004802C,UniRef:UniRef100_Q2FXZ7,UniRef:UniRef50_Q5M3E1,UniRef:UniRef90_Q2FXZ7
contig_1	Pyrodigal	gene	1689694	1691040	.	-	.	ID=GCA000560365_01628_gene;locus_tag=GCA000560365_01628;gene=mtaB
contig_1	Pyrodigal	CDS	1689694	1691040	.	-	0	ID=GCA000560365_01628;Name=tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB;locus_tag=GCA000560365_01628;product=tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB;Dbxref=GO:0006400,GO:0051539,GO:0061712,GO:1904047;gene=mtaB;Parent=GCA000560365_01628_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0621,COG:J,KEGG:K18707,RefSeq:WP_000108667.1,SO:0001217,UniParc:UPI00000542B0,UniRef:UniRef100_Q2FXZ6,UniRef:UniRef50_P54462,UniRef:UniRef90_A0A077URN1;ec_number=2.8.4.5
contig_1	Pyrodigal	gene	1691047	1691799	.	-	.	ID=GCA000560365_01629_gene;locus_tag=GCA000560365_01629;gene=rsmE
contig_1	Pyrodigal	CDS	1691047	1691799	.	-	0	ID=GCA000560365_01629;Name=16S rRNA (uracil(1498)-N(3))-methyltransferase;locus_tag=GCA000560365_01629;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;Dbxref=GO:0006364,GO:0008168;gene=rsmE;Parent=GCA000560365_01629_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1385,COG:J,KEGG:K09761,RefSeq:WP_001190128.1,SO:0001217,UniParc:UPI00004B5C18,UniRef:UniRef100_Q2FXZ5,UniRef:UniRef50_A0A122ER25,UniRef:UniRef90_A0A122ER25;ec_number=2.1.1.193
contig_1	Pyrodigal	gene	1691801	1692739	.	-	.	ID=GCA000560365_01630_gene;locus_tag=GCA000560365_01630;gene=prmA
contig_1	Pyrodigal	CDS	1691801	1692739	.	-	0	ID=GCA000560365_01630;Name=50S ribosomal protein L11 methyltransferase;locus_tag=GCA000560365_01630;product=50S ribosomal protein L11 methyltransferase;Dbxref=GO:0005737,GO:0008757,GO:0032259,GO:0036211,GO:0042054;gene=prmA;Parent=GCA000560365_01630_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2264,COG:J,RefSeq:WP_001104611.1,SO:0001217,UniParc:UPI00000542AD,UniRef:UniRef100_Q2FXZ4,UniRef:UniRef50_Q2FXZ4,UniRef:UniRef90_Q2FXZ4;ec_number=2.1.1.-
contig_1	Pyrodigal	gene	1692743	1693882	.	-	.	ID=GCA000560365_01631_gene;locus_tag=GCA000560365_01631;gene=dnaJ
contig_1	Pyrodigal	CDS	1692743	1693882	.	-	0	ID=GCA000560365_01631;Name=molecular chaperone DnaJ;locus_tag=GCA000560365_01631;product=molecular chaperone DnaJ;Dbxref=GO:0005524,GO:0005737,GO:0006260,GO:0006457,GO:0008270,GO:0009408,GO:0031072,GO:0042026,GO:0051082,GO:0051085;gene=dnaJ;Parent=GCA000560365_01631_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0484,COG:O,RefSeq:WP_001119021.1,SO:0001217,UniParc:UPI00000D7685,UniRef:UniRef100_Q2FXZ3,UniRef:UniRef50_P95830,UniRef:UniRef90_Q2FXZ3
contig_1	Pyrodigal	gene	1694018	1695850	.	-	.	ID=GCA000560365_01632_gene;locus_tag=GCA000560365_01632;gene=dnaK
contig_1	Pyrodigal	CDS	1694018	1695850	.	-	0	ID=GCA000560365_01632;Name=molecular chaperone DnaK;locus_tag=GCA000560365_01632;product=molecular chaperone DnaK;Dbxref=GO:0005524,GO:0006457,GO:0016887,GO:0051082,GO:0140662;gene=dnaK;Parent=GCA000560365_01632_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0443,COG:O,RefSeq:WP_000034716.1,SO:0001217,UniParc:UPI0000129601,UniRef:UniRef100_Q2FXZ2,UniRef:UniRef50_P17820,UniRef:UniRef90_Q2FXZ2
contig_1	Pyrodigal	gene	1695919	1696545	.	-	.	ID=GCA000560365_01633_gene;locus_tag=GCA000560365_01633;gene=grpE
contig_1	Pyrodigal	CDS	1695919	1696545	.	-	0	ID=GCA000560365_01633;Name=nucleotide exchange factor GrpE;locus_tag=GCA000560365_01633;product=nucleotide exchange factor GrpE;Dbxref=GO:0000774,GO:0005737,GO:0006457,GO:0042803,GO:0051082,GO:0051087;gene=grpE;Parent=GCA000560365_01633_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0576,COG:O,RefSeq:WP_000182215.1,SO:0001217,UniParc:UPI00000542AA,UniRef:UniRef100_Q2FXZ1,UniRef:UniRef50_Q2FXZ1,UniRef:UniRef90_Q2FXZ1
contig_1	Pyrodigal	gene	1696577	1697554	.	-	.	ID=GCA000560365_01634_gene;locus_tag=GCA000560365_01634;gene=hrcA
contig_1	Pyrodigal	CDS	1696577	1697554	.	-	0	ID=GCA000560365_01634;Name=heat-inducible transcriptional repressor HrcA;locus_tag=GCA000560365_01634;product=heat-inducible transcriptional repressor HrcA;Dbxref=GO:0003677,GO:0006355,GO:0045892;gene=hrcA;Parent=GCA000560365_01634_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1420,COG:K,KEGG:K03705,RefSeq:WP_000627140.1,SO:0001217,UniParc:UPI00000542A9,UniRef:UniRef100_Q2FXZ0,UniRef:UniRef50_P68792,UniRef:UniRef90_P68792
contig_1	Pyrodigal	gene	1697654	1698811	.	-	.	ID=GCA000560365_01635_gene;locus_tag=GCA000560365_01635;gene=hemW
contig_1	Pyrodigal	CDS	1697654	1698811	.	-	0	ID=GCA000560365_01635;Name=radical SAM family heme chaperone HemW;locus_tag=GCA000560365_01635;product=radical SAM family heme chaperone HemW;Dbxref=GO:0005737,GO:0006779,GO:0051539,GO:0051989;gene=hemW;Parent=GCA000560365_01635_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0635,COG:H,SO:0001217,UniRef:UniRef50_A0A0D6HI97,UniRef:UniRef90_A0A0D6HI97
contig_1	Infernal	gene	1699030	1699275	.	+	.	ID=GCA000560365_01636_gene;locus_tag=GCA000560365_01636;gene=S35
contig_1	Infernal	ncRNA	1699030	1699275	1.1e-20	+	.	ID=GCA000560365_01636;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000560365_01636;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000560365_01636_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	1699341	1701164	.	-	.	ID=GCA000560365_01637_gene;locus_tag=GCA000560365_01637;gene=lepA
contig_1	Pyrodigal	CDS	1699341	1701164	.	-	0	ID=GCA000560365_01637;Name=translation elongation factor 4;locus_tag=GCA000560365_01637;product=translation elongation factor 4;Dbxref=GO:0003746,GO:0003924,GO:0005525,GO:0005886,GO:0043022,GO:0045727,GO:1990606;gene=lepA;Parent=GCA000560365_01637_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0481,COG:J,RefSeq:WP_000368341.1,SO:0001217,UniParc:UPI00000542A7,UniRef:UniRef100_Q2FXY7,UniRef:UniRef50_Q2FXY7,UniRef:UniRef90_Q2FXY7;ec_number=3.6.5.n1
contig_1	Pyrodigal	gene	1701510	1701761	.	+	.	ID=GCA000560365_01638_gene;locus_tag=GCA000560365_01638;gene=rpsT
contig_1	Pyrodigal	CDS	1701510	1701761	.	+	0	ID=GCA000560365_01638;Name=30S ribosomal protein S20;locus_tag=GCA000560365_01638;product=30S ribosomal protein S20;Dbxref=GO:0003723,GO:0003735,GO:0005829,GO:0005840,GO:0006412,GO:0015935,GO:0070181;gene=rpsT;Parent=GCA000560365_01638_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0268,COG:J,KEGG:K02968,RefSeq:WP_001274017.1,SO:0001217,UniParc:UPI0000048018,UniRef:UniRef100_Q2FXY6,UniRef:UniRef50_Q5HNW1,UniRef:UniRef90_Q2FXY6
contig_1	Pyrodigal	gene	1701806	1702780	.	-	.	ID=GCA000560365_01639_gene;locus_tag=GCA000560365_01639;gene=holA
contig_1	Pyrodigal	CDS	1701806	1702780	.	-	0	ID=GCA000560365_01639;Name=DNA polymerase III subunit delta;locus_tag=GCA000560365_01639;product=DNA polymerase III subunit delta;Dbxref=GO:0003677,GO:0003887,GO:0006260;gene=holA;Parent=GCA000560365_01639_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1466,COG:L,RefSeq:WP_001282562.1,SO:0001217,UniParc:UPI00000542A5,UniRef:UniRef100_Q2FXY5,UniRef:UniRef50_K9AV25,UniRef:UniRef90_A0A3A5LSD9;ec_number=2.7.7.7
contig_1	Pyrodigal	gene	1702837	1705038	.	-	.	ID=GCA000560365_01640_gene;locus_tag=GCA000560365_01640;gene=comEC
contig_1	Pyrodigal	CDS	1702837	1705038	.	-	0	ID=GCA000560365_01640;Name=DNA internalization-related competence protein ComEC/Rec2;locus_tag=GCA000560365_01640;product=DNA internalization-related competence protein ComEC/Rec2;Dbxref=GO:0005215,GO:0009290,GO:0016020;gene=comEC;Parent=GCA000560365_01640_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2333,COG:U,KEGG:K02238,RefSeq:WP_001548978.1,SO:0001217,UniParc:UPI0000696C5D,UniRef:UniRef100_A0AAN2Q3C1,UniRef:UniRef50_A0A6K1MRM3,UniRef:UniRef90_A0A6K1MRM3
contig_1	Pyrodigal	gene	1705043	1705474	.	-	.	ID=GCA000560365_01641_gene;locus_tag=GCA000560365_01641;gene=comEB
contig_1	Pyrodigal	CDS	1705043	1705474	.	-	0	ID=GCA000560365_01641;Name=ComE operon protein 2;locus_tag=GCA000560365_01641;product=ComE operon protein 2;gene=comEB;Parent=GCA000560365_01641_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2131,COG:FJ,RefSeq:WP_001548979.1,SO:0001217,UniParc:UPI00004B5C1B,UniRef:UniRef100_Q2G2A1,UniRef:UniRef50_A0A1E7X972,UniRef:UniRef90_A0A380G1G9
contig_1	Pyrodigal	gene	1705596	1706273	.	-	.	ID=GCA000560365_01642_gene;locus_tag=GCA000560365_01642;gene=comEA
contig_1	Pyrodigal	CDS	1705596	1706273	.	-	0	ID=GCA000560365_01642;Name=ComE operon protein 1;locus_tag=GCA000560365_01642;product=ComE operon protein 1;gene=comEA;Parent=GCA000560365_01642_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1555,COG:L,SO:0001217,UniParc:UPI0001574486,UniRef:UniRef100_A0A0D6HJH2,UniRef:UniRef50_A0A9P2YX25,UniRef:UniRef90_A0A9P2YX25
contig_1	Pyrodigal	gene	1706322	1707038	.	-	.	ID=GCA000560365_01643_gene;locus_tag=GCA000560365_01643
contig_1	Pyrodigal	CDS	1706322	1707038	.	-	0	ID=GCA000560365_01643;Name=Methyltransferase;locus_tag=GCA000560365_01643;product=Methyltransferase;Parent=GCA000560365_01643_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4976,COG:R,RefSeq:WP_000084829.1,SO:0001217,UniParc:UPI000005429E,UniRef:UniRef100_Q2G2A0,UniRef:UniRef50_A0A2S6DNM9,UniRef:UniRef90_A0A2S6DNM9
contig_1	Pyrodigal	gene	1707041	1707394	.	-	.	ID=GCA000560365_01644_gene;locus_tag=GCA000560365_01644;gene=rsfS
contig_1	Pyrodigal	CDS	1707041	1707394	.	-	0	ID=GCA000560365_01644;Name=ribosome silencing factor;locus_tag=GCA000560365_01644;product=ribosome silencing factor;Dbxref=GO:0017148,GO:0043022;gene=rsfS;Parent=GCA000560365_01644_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0799,COG:J,RefSeq:WP_001088022.1,SO:0001217,UniParc:UPI000005429D,UniRef:UniRef100_Q2G298,UniRef:UniRef50_Q2G298,UniRef:UniRef90_Q2G298
contig_1	Pyrodigal	gene	1707395	1707979	.	-	.	ID=GCA000560365_01645_gene;locus_tag=GCA000560365_01645;gene=nadD
contig_1	Pyrodigal	CDS	1707395	1707979	.	-	0	ID=GCA000560365_01645;Name=nicotinate (nicotinamide) nucleotide adenylyltransferase;locus_tag=GCA000560365_01645;product=nicotinate (nicotinamide) nucleotide adenylyltransferase;Dbxref=GO:0000166,GO:0000309,GO:0004515,GO:0005737,GO:0009435,GO:0016787,GO:0046872;gene=nadD;Parent=GCA000560365_01645_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1713,COG:TR,RefSeq:WP_001019324.1,SO:0001217,UniParc:UPI00000D767A,UniRef:UniRef100_Q2G297,UniRef:UniRef50_Q2G297,UniRef:UniRef90_Q2G297;ec_number=3.6.1.41
contig_1	Pyrodigal	gene	1707969	1708538	.	-	.	ID=GCA000560365_01646_gene;locus_tag=GCA000560365_01646;gene=nadD
contig_1	Pyrodigal	CDS	1707969	1708538	.	-	0	ID=GCA000560365_01646;Name=nicotinate (nicotinamide) nucleotide adenylyltransferase;locus_tag=GCA000560365_01646;product=nicotinate (nicotinamide) nucleotide adenylyltransferase;Dbxref=GO:0000309,GO:0004515,GO:0005524,GO:0005737,GO:0009435;gene=nadD;Parent=GCA000560365_01646_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1057,COG:H,RefSeq:WP_000725162.1,SO:0001217,UniParc:UPI000005429B,UniRef:UniRef100_Q2FXY3,UniRef:UniRef50_Q2FXY3,UniRef:UniRef90_Q2FXY3;ec_number=2.7.7.18
contig_1	Pyrodigal	gene	1708541	1708831	.	-	.	ID=GCA000560365_01647_gene;locus_tag=GCA000560365_01647;gene=yhbY
contig_1	Pyrodigal	CDS	1708541	1708831	.	-	0	ID=GCA000560365_01647;Name=ribosome assembly RNA-binding protein YhbY;locus_tag=GCA000560365_01647;product=ribosome assembly RNA-binding protein YhbY;Dbxref=GO:0003723;gene=yhbY;Parent=GCA000560365_01647_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1534,COG:J,RefSeq:WP_000955231.1,SO:0001217,UniParc:UPI000005429A,UniRef:UniRef100_Q2FXY2,UniRef:UniRef50_C0ZB08,UniRef:UniRef90_Q2FXY2
contig_1	Pyrodigal	gene	1708835	1709641	.	-	.	ID=GCA000560365_01648_gene;locus_tag=GCA000560365_01648;gene=aroE
contig_1	Pyrodigal	CDS	1708835	1709641	.	-	0	ID=GCA000560365_01648;Name=Shikimate dehydrogenase (NADP(+));locus_tag=GCA000560365_01648;product=Shikimate dehydrogenase (NADP(+));Dbxref=GO:0004764,GO:0005829,GO:0008652,GO:0009073,GO:0009423,GO:0019632,GO:0050661;gene=aroE;Parent=GCA000560365_01648_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0169,COG:E,RefSeq:WP_000666761.1,SO:0001217,UniParc:UPI00004B5C1D,UniRef:UniRef100_Q2FXY1,UniRef:UniRef50_Q5HNV1,UniRef:UniRef90_Q2FXY1;ec_number=1.1.1.25
contig_1	Pyrodigal	gene	1709655	1710755	.	-	.	ID=GCA000560365_01649_gene;locus_tag=GCA000560365_01649;gene=yqeH
contig_1	Pyrodigal	CDS	1709655	1710755	.	-	0	ID=GCA000560365_01649;Name=ribosome biogenesis GTPase YqeH;locus_tag=GCA000560365_01649;product=ribosome biogenesis GTPase YqeH;Dbxref=GO:0003924,GO:0005525,GO:0005737,GO:0042254;gene=yqeH;Parent=GCA000560365_01649_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1161,COG:J,RefSeq:WP_001280141.1,SO:0001217,UniParc:UPI00000D9E63,UniRef:UniRef100_Q2FXY0,UniRef:UniRef50_P54453,UniRef:UniRef90_Q2FXY0
contig_1	Pyrodigal	gene	1710756	1711283	.	-	.	ID=GCA000560365_01650_gene;locus_tag=GCA000560365_01650;gene=yqeG
contig_1	Pyrodigal	CDS	1710756	1711283	.	-	0	ID=GCA000560365_01650;Name=YqeG family HAD IIIA-type phosphatase;locus_tag=GCA000560365_01650;product=YqeG family HAD IIIA-type phosphatase;gene=yqeG;Parent=GCA000560365_01650_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2179,COG:R,RefSeq:WP_000524902.1,SO:0001217,UniParc:UPI0000054297,UniRef:UniRef100_Q2FXX9,UniRef:UniRef50_Q2FXX9,UniRef:UniRef90_Q2FXX9
contig_1	Pyrodigal	gene	1711303	1711989	.	-	.	ID=GCA000560365_01651_gene;locus_tag=GCA000560365_01651;gene=mtnN
contig_1	Pyrodigal	CDS	1711303	1711989	.	-	0	ID=GCA000560365_01651;Name=5'-methylthioadenosine/adenosylhomocysteine nucleosidase;locus_tag=GCA000560365_01651;product=5'-methylthioadenosine/adenosylhomocysteine nucleosidase;Dbxref=GO:0005829,GO:0008782,GO:0008930,GO:0009116,GO:0009164,GO:0019284,GO:0019509;gene=mtnN;Parent=GCA000560365_01651_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0775,COG:FH,KEGG:K01243,RefSeq:WP_000579275.1,SO:0001217,UniParc:UPI00000D783C,UniRef:UniRef100_Q2FXX8,UniRef:UniRef50_Q4L6V0,UniRef:UniRef90_Q2FXX8;ec_number=3.2.2.9
contig_1	Pyrodigal	gene	1712303	1712572	.	+	.	ID=GCA000560365_01652_gene;locus_tag=GCA000560365_01652
contig_1	Pyrodigal	CDS	1712303	1712572	.	+	0	ID=GCA000560365_01652;Name=hypothetical protein;locus_tag=GCA000560365_01652;product=hypothetical protein;Parent=GCA000560365_01652_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000829750.1,SO:0001217,UniParc:UPI0000054295,UniRef:UniRef100_Q2FXX6,UniRef:UniRef50_Q2FXX6,UniRef:UniRef90_Q2FXX6
contig_1	Pyrodigal	gene	1712774	1713526	.	-	.	ID=GCA000560365_01653_gene;locus_tag=GCA000560365_01653;gene=sel26
contig_1	Pyrodigal	CDS	1712774	1713526	.	-	0	ID=GCA000560365_01653;Name=staphylococcal enterotoxin type 26;locus_tag=GCA000560365_01653;product=staphylococcal enterotoxin type 26;gene=sel26;Parent=GCA000560365_01653_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K11040,NCBIProtein:KAG18833.1,RefSeq:WP_001548981.1,SO:0001217,UniParc:UPI0001BE5BF8,UniRef:UniRef100_A0A0D6HI16,UniRef:UniRef50_A0A0D6HI16,UniRef:UniRef90_A0A0D6HI16
contig_1	Pyrodigal	gene	1713940	1715160	.	-	.	ID=GCA000560365_01654_gene;locus_tag=GCA000560365_01654
contig_1	Pyrodigal	CDS	1713940	1715160	.	-	0	ID=GCA000560365_01654;Name=Fido domain-containing protein;locus_tag=GCA000560365_01654;product=Fido domain-containing protein;Parent=GCA000560365_01654_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3177,COG:K,RefSeq:WP_000542309.1,SO:0001217,UniParc:UPI0000054293,UniRef:UniRef100_Q2FXX4,UniRef:UniRef50_Q2FXX4,UniRef:UniRef90_Q2FXX4
contig_1	Pyrodigal	gene	1715449	1716678	.	-	.	ID=GCA000560365_01655_gene;locus_tag=GCA000560365_01655;gene=mntH
contig_1	Pyrodigal	CDS	1715449	1716678	.	-	0	ID=GCA000560365_01655;Name=Divalent metal cation transporter;locus_tag=GCA000560365_01655;product=Divalent metal cation transporter;gene=mntH;Parent=GCA000560365_01655_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1914,COG:P,RefSeq:WP_000533238.1,SO:0001217,UniParc:UPI0000054292,UniRef:UniRef100_Q2FXX3,UniRef:UniRef50_Q5HNU7,UniRef:UniRef90_Q2FXX3
contig_1	Pyrodigal	gene	1716691	1717443	.	-	.	ID=GCA000560365_01656_gene;locus_tag=GCA000560365_01656;gene=pxpA
contig_1	Pyrodigal	CDS	1716691	1717443	.	-	0	ID=GCA000560365_01656;Name=5-oxoprolinase subunit PxpA;locus_tag=GCA000560365_01656;product=5-oxoprolinase subunit PxpA;Dbxref=GO:0003824,GO:0005524,GO:0005975,GO:0017168;gene=pxpA;Parent=GCA000560365_01656_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1540,COG:E,RefSeq:WP_001261795.1,SO:0001217,UniParc:UPI0000054291,UniRef:UniRef100_Q2FXX2,UniRef:UniRef50_Q57RM2,UniRef:UniRef90_Q2FXX2;ec_number=3.5.2.9
contig_1	Pyrodigal	gene	1717443	1718804	.	-	.	ID=GCA000560365_01657_gene;locus_tag=GCA000560365_01657;gene=accC
contig_1	Pyrodigal	CDS	1717443	1718804	.	-	0	ID=GCA000560365_01657;Name=Acetyl-CoA carboxylase biotin carboxylase subunit;locus_tag=GCA000560365_01657;product=Acetyl-CoA carboxylase biotin carboxylase subunit;gene=accC;Parent=GCA000560365_01657_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0439,COG:I,RefSeq:WP_000942744.1,SO:0001217,UniParc:UPI0000054290,UniRef:UniRef100_Q2FXX1,UniRef:UniRef50_A0A2T4PV93,UniRef:UniRef90_A0AAE8P885
contig_1	Pyrodigal	gene	1718818	1719267	.	-	.	ID=GCA000560365_01658_gene;locus_tag=GCA000560365_01658;gene=accB
contig_1	Pyrodigal	CDS	1718818	1719267	.	-	0	ID=GCA000560365_01658;Name=Acetyl-CoA carboxylase biotin carboxyl carrier protein subunit;locus_tag=GCA000560365_01658;product=Acetyl-CoA carboxylase biotin carboxyl carrier protein subunit;gene=accB;Parent=GCA000560365_01658_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0511,COG:I,RefSeq:WP_001019337.1,SO:0001217,UniParc:UPI000005428F,UniRef:UniRef100_Q2FXX0,UniRef:UniRef50_A0A380FYW2,UniRef:UniRef90_A0A2W2SQL9
contig_1	Pyrodigal	gene	1719269	1720279	.	-	.	ID=GCA000560365_01659_gene;locus_tag=GCA000560365_01659;gene=pxpC
contig_1	Pyrodigal	CDS	1719269	1720279	.	-	0	ID=GCA000560365_01659;Name=Carboxyltransferase domain-containing protein;locus_tag=GCA000560365_01659;product=Carboxyltransferase domain-containing protein;gene=pxpC;Parent=GCA000560365_01659_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1984,COG:E,RefSeq:WP_000023316.1,SO:0001217,UniParc:UPI000005428E,UniRef:UniRef100_Q2FXW9,UniRef:UniRef50_Q2FXW9,UniRef:UniRef90_Q2FXW9
contig_1	Pyrodigal	gene	1720269	1721003	.	-	.	ID=GCA000560365_01660_gene;locus_tag=GCA000560365_01660;gene=pxpB
contig_1	Pyrodigal	CDS	1720269	1721003	.	-	0	ID=GCA000560365_01660;Name=5-oxoprolinase subunit PxpB;locus_tag=GCA000560365_01660;product=5-oxoprolinase subunit PxpB;Dbxref=GO:0005975,GO:0008152,GO:0017168;gene=pxpB;Parent=GCA000560365_01660_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2049,COG:E,RefSeq:WP_000383180.1,SO:0001217,UniParc:UPI00000CAD41,UniRef:UniRef100_W8U5F9,UniRef:UniRef50_A0A9X0PF13,UniRef:UniRef90_W8U5F9;ec_number=3.5.2.9
contig_1	Pyrodigal	gene	1721329	1721805	.	-	.	ID=GCA000560365_01661_gene;locus_tag=GCA000560365_01661;gene=greA
contig_1	Pyrodigal	CDS	1721329	1721805	.	-	0	ID=GCA000560365_01661;Name=transcription elongation factor GreA;locus_tag=GCA000560365_01661;product=transcription elongation factor GreA;Dbxref=GO:0003677,GO:0006354,GO:0032784,GO:0070063;gene=greA;Parent=GCA000560365_01661_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0782,COG:K,RefSeq:WP_000431312.1,SO:0001217,UniParc:UPI000005428C,UniRef:UniRef100_Q2FXW7,UniRef:UniRef50_Q2FXW7,UniRef:UniRef90_Q2FXW7
contig_1	Pyrodigal	gene	1721833	1722456	.	-	.	ID=GCA000560365_01662_gene;locus_tag=GCA000560365_01662;gene=udk
contig_1	Pyrodigal	CDS	1721833	1722456	.	-	0	ID=GCA000560365_01662;Name=uridine kinase;locus_tag=GCA000560365_01662;product=uridine kinase;Dbxref=GO:0004849,GO:0005524,GO:0005737,GO:0043771,GO:0044206,GO:0044211;gene=udk;Parent=GCA000560365_01662_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0572,COG:F,RefSeq:WP_000648617.1,SO:0001217,UniParc:UPI000005428B,UniRef:UniRef100_Q2FXW6,UniRef:UniRef50_Q9KDD8,UniRef:UniRef90_Q2FXW6;ec_number=2.7.1.48
contig_1	Pyrodigal	gene	1722456	1723724	.	-	.	ID=GCA000560365_01663_gene;locus_tag=GCA000560365_01663;gene=rlhA
contig_1	Pyrodigal	CDS	1722456	1723724	.	-	0	ID=GCA000560365_01663;Name=Peptidase family U32 C-terminal domain-containing protein;locus_tag=GCA000560365_01663;product=Peptidase family U32 C-terminal domain-containing protein;gene=rlhA;Parent=GCA000560365_01663_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0826,COG:J,KEGG:K08303,RefSeq:WP_000848304.1,SO:0001217,UniParc:UPI000005428A,UniRef:UniRef100_Q2FXW5,UniRef:UniRef50_O32034,UniRef:UniRef90_Q2FXW5;ec_number=3.4.-.-
contig_1	Pyrodigal	gene	1723736	1724659	.	-	.	ID=GCA000560365_01664_gene;locus_tag=GCA000560365_01664;gene=rlhA
contig_1	Pyrodigal	CDS	1723736	1724659	.	-	0	ID=GCA000560365_01664;Name=Peptidase U32 family protein;locus_tag=GCA000560365_01664;product=Peptidase U32 family protein;gene=rlhA;Parent=GCA000560365_01664_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0826,COG:J,RefSeq:WP_000137775.1,SO:0001217,UniParc:UPI00000D9E6B,UniRef:UniRef100_Q2FXW4,UniRef:UniRef50_O32035,UniRef:UniRef90_A0A389PYG2
contig_1	Pyrodigal	gene	1724662	1725300	.	-	.	ID=GCA000560365_01665_gene;locus_tag=GCA000560365_01665;gene=trmR
contig_1	Pyrodigal	CDS	1724662	1725300	.	-	0	ID=GCA000560365_01665;Name=tRNA 5-hydroxyuridine methyltransferase;locus_tag=GCA000560365_01665;product=tRNA 5-hydroxyuridine methyltransferase;gene=trmR;Parent=GCA000560365_01665_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4122,COG:J,RefSeq:WP_000342266.1,SO:0001217,UniParc:UPI0000054288,UniRef:UniRef100_Q2FXW3,UniRef:UniRef50_A0A2A1K8K5,UniRef:UniRef90_A0A6B1RN35
contig_1	Pyrodigal	gene	1725585	1725893	.	-	.	ID=GCA000560365_01666_gene;locus_tag=GCA000560365_01666;gene=yrzB
contig_1	Pyrodigal	CDS	1725585	1725893	.	-	0	ID=GCA000560365_01666;Name=UPF0473 protein SAOUHSC_01719;locus_tag=GCA000560365_01666;product=UPF0473 protein SAOUHSC_01719;gene=yrzB;Parent=GCA000560365_01666_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3906,COG:S,RefSeq:WP_000134779.1,SO:0001217,UniParc:UPI0000054287,UniRef:UniRef100_Q2FXW2,UniRef:UniRef50_Q2FXW2,UniRef:UniRef90_Q2FXW2
contig_1	Pyrodigal	gene	1725908	1726336	.	-	.	ID=GCA000560365_01667_gene;locus_tag=GCA000560365_01667;gene=ruvX
contig_1	Pyrodigal	CDS	1725908	1726336	.	-	0	ID=GCA000560365_01667;Name=Holliday junction resolvase RuvX;locus_tag=GCA000560365_01667;product=Holliday junction resolvase RuvX;Dbxref=GO:0000967,GO:0004518,GO:0005829,GO:0006364;gene=ruvX;Parent=GCA000560365_01667_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0816,COG:JLK,RefSeq:WP_000939059.1,SO:0001217,UniParc:UPI0000054286,UniRef:UniRef100_Q2FXW1,UniRef:UniRef50_Q2FXW1,UniRef:UniRef90_Q2FXW1;ec_number=3.1.21.10
contig_1	Pyrodigal	gene	1726340	1726600	.	-	.	ID=GCA000560365_01668_gene;locus_tag=GCA000560365_01668;gene=ireB
contig_1	Pyrodigal	CDS	1726340	1726600	.	-	0	ID=GCA000560365_01668;Name=IreB family regulatory phosphoprotein;locus_tag=GCA000560365_01668;product=IreB family regulatory phosphoprotein;gene=ireB;Parent=GCA000560365_01668_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4472,COG:S,RefSeq:WP_000426912.1,SO:0001217,UniParc:UPI00000D778B,UniRef:UniRef100_Q2FXW0,UniRef:UniRef50_Q7WY61,UniRef:UniRef90_Q2FXW0
contig_1	Pyrodigal	gene	1726663	1729296	.	-	.	ID=GCA000560365_01669_gene;locus_tag=GCA000560365_01669;gene=alaS
contig_1	Pyrodigal	CDS	1726663	1729296	.	-	0	ID=GCA000560365_01669;Name=alanine--tRNA ligase;locus_tag=GCA000560365_01669;product=alanine--tRNA ligase;Dbxref=GO:0000049,GO:0000166,GO:0002161,GO:0004813,GO:0005524,GO:0005737,GO:0005829,GO:0006419,GO:0008270,GO:0016740;gene=alaS;Parent=GCA000560365_01669_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0013,COG:J,SO:0001217,UniParc:UPI0000052298,UniRef:UniRef100_Q2FXV9,UniRef:UniRef50_Q03ER8,UniRef:UniRef90_Q2FXV9;ec_number=6.1.1.7
contig_1	Infernal	regulatory_region	1729425	1729602	3.8e-13	-	.	ID=KMHODOBJJH_181;Name=T-box leader;product=T-box leader;Dbxref=RFAM:RF00230;inference=profile:Rfam:RF00230;Note=SO:0000140;regulatory_class=attenuator
contig_1	Pyrodigal	gene	1729636	1732113	.	-	.	ID=GCA000560365_01670_gene;locus_tag=GCA000560365_01670;gene=recD
contig_1	Pyrodigal	CDS	1729636	1732113	.	-	0	ID=GCA000560365_01670;Name=ATP-dependent RecD2 DNA helicase;locus_tag=GCA000560365_01670;product=ATP-dependent RecD2 DNA helicase;gene=recD;Parent=GCA000560365_01670_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0507,COG:L,RefSeq:WP_001283311.1,SO:0001217,UniParc:UPI0000054283,UniRef:UniRef100_Q2FXV8,UniRef:UniRef50_A0A654AZ37,UniRef:UniRef90_Q2FXV8
contig_1	Pyrodigal	gene	1732115	1732783	.	-	.	ID=GCA000560365_01671_gene;locus_tag=GCA000560365_01671;gene=tPR
contig_1	Pyrodigal	CDS	1732115	1732783	.	-	0	ID=GCA000560365_01671;Name=Tetratricopeptide repeat protein;locus_tag=GCA000560365_01671;product=Tetratricopeptide repeat protein;gene=tPR;Parent=GCA000560365_01671_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0457,COG:R,RefSeq:WP_000567028.1,SO:0001217,UniParc:UPI0000054282,UniRef:UniRef100_Q2FXV7,UniRef:UniRef50_A0A2A1KA84,UniRef:UniRef90_A0A7Z1N2M0
contig_1	Pyrodigal	gene	1733245	1734363	.	-	.	ID=GCA000560365_01672_gene;locus_tag=GCA000560365_01672;gene=mnmA
contig_1	Pyrodigal	CDS	1733245	1734363	.	-	0	ID=GCA000560365_01672;Name=tRNA 2-thiouridine(34) synthase MnmA;locus_tag=GCA000560365_01672;product=tRNA 2-thiouridine(34) synthase MnmA;Dbxref=GO:0000049,GO:0002143,GO:0005524,GO:0005737,GO:0008033,GO:0016740,GO:0016783,GO:0103016;gene=mnmA;Parent=GCA000560365_01672_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0482,COG:J,KEGG:K00566,RefSeq:WP_000066097.1,SO:0001217,UniParc:UPI000013748D,UniRef:UniRef100_Q2FXV6,UniRef:UniRef50_Q97T38,UniRef:UniRef90_Q2FXV6;ec_number=2.8.1.13
contig_1	Pyrodigal	gene	1734364	1735506	.	-	.	ID=GCA000560365_01673_gene;locus_tag=GCA000560365_01673;gene=nifS
contig_1	Pyrodigal	CDS	1734364	1735506	.	-	0	ID=GCA000560365_01673;Name=cysteine desulfurase;locus_tag=GCA000560365_01673;product=cysteine desulfurase;gene=nifS;Parent=GCA000560365_01673_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1104,COG:E,KEGG:K04487,RefSeq:WP_000409167.1,SO:0001217,UniParc:UPI000005427F,UniRef:UniRef100_Q2FXV4,UniRef:UniRef50_A0A391MGC8,UniRef:UniRef90_A0A391MGC8;ec_number=2.8.1.7
contig_1	Pyrodigal	gene	1735818	1736831	.	+	.	ID=GCA000560365_01674_gene;locus_tag=GCA000560365_01674;gene=ssuD
contig_1	Pyrodigal	CDS	1735818	1736831	.	+	0	ID=GCA000560365_01674;Name=LLM class flavin-dependent oxidoreductase;locus_tag=GCA000560365_01674;product=LLM class flavin-dependent oxidoreductase;gene=ssuD;Parent=GCA000560365_01674_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2141,COG:HR,RefSeq:WP_000985886.1,SO:0001217,UniParc:UPI00004B5C22,UniRef:UniRef100_A0A0D6HHK7,UniRef:UniRef50_A0A0D6HHK7,UniRef:UniRef90_A0A0D6HHK7
contig_1	Pyrodigal	gene	1737068	1737214	.	-	.	ID=GCA000560365_01675_gene;locus_tag=GCA000560365_01675
contig_1	Pyrodigal	CDS	1737068	1737214	.	-	0	ID=GCA000560365_01675;Name=SAS049 family protein;locus_tag=GCA000560365_01675;product=SAS049 family protein;Parent=GCA000560365_01675_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000009238.1,SO:0001217,UniParc:UPI000005427D,UniRef:UniRef100_Q2FXV2,UniRef:UniRef50_A0A7Z0RRV6,UniRef:UniRef90_Q2FXV2
contig_1	Pyrodigal	gene	1737254	1737436	.	-	.	ID=GCA000560365_01676_gene;locus_tag=GCA000560365_01676;gene=yjbJ
contig_1	Pyrodigal	CDS	1737254	1737436	.	-	0	ID=GCA000560365_01676;Name=UPF0337 protein SAS1561;locus_tag=GCA000560365_01676;product=UPF0337 protein SAS1561;gene=yjbJ;Parent=GCA000560365_01676_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3237,COG:S,RefSeq:WP_000752913.1,SO:0001217,UniParc:UPI00004B5C23,UniRef:UniRef100_Q2FGA1,UniRef:UniRef50_Q2FXV1,UniRef:UniRef90_Q2FXV1
contig_1	Pyrodigal	gene	1737536	1737958	.	-	.	ID=GCA000560365_01677_gene;locus_tag=GCA000560365_01677;gene=cymR
contig_1	Pyrodigal	CDS	1737536	1737958	.	-	0	ID=GCA000560365_01677;Name=cysteine metabolism transcriptional regulator CymR;locus_tag=GCA000560365_01677;product=cysteine metabolism transcriptional regulator CymR;gene=cymR;Parent=GCA000560365_01677_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1959,COG:K,KEGG:K17472,RefSeq:WP_000704122.1,SO:0001217,UniParc:UPI00000D7899,UniRef:UniRef100_A0A7Z7W340,UniRef:UniRef50_B9E703,UniRef:UniRef90_A0A2X2K6J6
contig_1	Pyrodigal	gene	1738043	1739317	.	+	.	ID=GCA000560365_01678_gene;locus_tag=GCA000560365_01678;gene=rarA
contig_1	Pyrodigal	CDS	1738043	1739317	.	+	0	ID=GCA000560365_01678;Name=AAA+ ATPase domain-containing protein;locus_tag=GCA000560365_01678;product=AAA+ ATPase domain-containing protein;gene=rarA;Parent=GCA000560365_01678_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2256,COG:L,KEGG:K07478,RefSeq:WP_000102735.1,SO:0001217,UniParc:UPI00004B5C24,UniRef:UniRef100_Q2FXU8,UniRef:UniRef50_O34528,UniRef:UniRef90_Q2FXU8
contig_1	Pyrodigal	gene	1739478	1740251	.	-	.	ID=GCA000560365_01679_gene;locus_tag=GCA000560365_01679;gene=tcdA
contig_1	Pyrodigal	CDS	1739478	1740251	.	-	0	ID=GCA000560365_01679;Name=HesA/moeB/thiF family protein;locus_tag=GCA000560365_01679;product=HesA/moeB/thiF family protein;gene=tcdA;Parent=GCA000560365_01679_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1179,COG:J,RefSeq:WP_000682646.1,SO:0001217,UniParc:UPI0000054276,UniRef:UniRef100_Q2FXU7,UniRef:UniRef50_A0A2S5CXU7,UniRef:UniRef90_A0A077UH91
contig_1	Infernal	gene	1740444	1740634	.	-	.	ID=GCA000560365_01680_gene;locus_tag=GCA000560365_01680;gene=6S
contig_1	Infernal	ncRNA	1740444	1740634	1.7e-16	-	.	ID=GCA000560365_01680;Name=6S / SsrS RNA;locus_tag=GCA000560365_01680;product=6S / SsrS RNA;Dbxref=RFAM:RF00013;Parent=GCA000560365_01680_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00013
contig_1	Pyrodigal	gene	1740712	1742478	.	-	.	ID=GCA000560365_01681_gene;locus_tag=GCA000560365_01681;gene=aspS
contig_1	Pyrodigal	CDS	1740712	1742478	.	-	0	ID=GCA000560365_01681;Name=aspartate--tRNA ligase;locus_tag=GCA000560365_01681;product=aspartate--tRNA ligase;Dbxref=GO:0000166,GO:0003676,GO:0004812,GO:0004815,GO:0005524,GO:0005737,GO:0006418,GO:0006422,GO:0016740,GO:0016874;gene=aspS;Parent=GCA000560365_01681_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0173,COG:J,RefSeq:WP_000044799.1,SO:0001217,UniParc:UPI0000030ADD,UniRef:UniRef100_Q2FG97,UniRef:UniRef50_A9KIA6,UniRef:UniRef90_Q2FXU5;ec_number=6.1.1.12
contig_1	Pyrodigal	gene	1742494	1743756	.	-	.	ID=GCA000560365_01682_gene;locus_tag=GCA000560365_01682;gene=hisS
contig_1	Pyrodigal	CDS	1742494	1743756	.	-	0	ID=GCA000560365_01682;Name=histidine--tRNA ligase;locus_tag=GCA000560365_01682;product=histidine--tRNA ligase;Dbxref=GO:0004821,GO:0005524,GO:0005737,GO:0006427,GO:0016740;gene=hisS;Parent=GCA000560365_01682_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0124,COG:J,KEGG:K01892,RefSeq:WP_000590826.1,SO:0001217,UniParc:UPI000002FBCF,UniRef:UniRef100_Q2FXU4,UniRef:UniRef50_O32039,UniRef:UniRef90_Q2FXU4;ec_number=6.1.1.21
contig_1	Pyrodigal	gene	1744217	1745092	.	-	.	ID=GCA000560365_01683_gene;locus_tag=GCA000560365_01683;gene=lytH
contig_1	Pyrodigal	CDS	1744217	1745092	.	-	0	ID=GCA000560365_01683;Name=putative cell wall amidase LytH;locus_tag=GCA000560365_01683;product=putative cell wall amidase LytH;Dbxref=GO:0005576,GO:0008745,GO:0009253,GO:0030288,GO:0071555;gene=lytH;Parent=GCA000560365_01683_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0860,COG:M,KEGG:K01448,RefSeq:WP_000717800.1,SO:0001217,UniParc:UPI0000054273,UniRef:UniRef100_Q2FXU3,UniRef:UniRef50_Q2FXU3,UniRef:UniRef90_Q2FXU3;ec_number=3.5.1.-
contig_1	Pyrodigal	gene	1745089	1745541	.	-	.	ID=GCA000560365_01684_gene;locus_tag=GCA000560365_01684;gene=dtd
contig_1	Pyrodigal	CDS	1745089	1745541	.	-	0	ID=GCA000560365_01684;Name=D-aminoacyl-tRNA deacylase;locus_tag=GCA000560365_01684;product=D-aminoacyl-tRNA deacylase;Dbxref=GO:0000049,GO:0004045,GO:0005737,GO:0008152,GO:0019478,GO:0043908,GO:0051500,GO:0106026;gene=dtd;Parent=GCA000560365_01684_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1490,COG:J,KEGG:K07560,RefSeq:WP_000869983.1,SO:0001217,UniParc:UPI000012993E,UniRef:UniRef100_Q2FXU2,UniRef:UniRef50_Q2FXU2,UniRef:UniRef90_Q2FXU2;ec_number=3.1.1.96
contig_1	Pyrodigal	gene	1745553	1747763	.	-	.	ID=GCA000560365_01685_gene;locus_tag=GCA000560365_01685;gene=relA
contig_1	Pyrodigal	CDS	1745553	1747763	.	-	0	ID=GCA000560365_01685;Name=GTP pyrophosphokinase;locus_tag=GCA000560365_01685;product=GTP pyrophosphokinase;Dbxref=GO:0005524,GO:0005525,GO:0005886,GO:0008728,GO:0015970,GO:0016301;gene=relA;Parent=GCA000560365_01685_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0317,COG:TK,KEGG:K01139,SO:0001217,UniParc:UPI0000054270,UniRef:UniRef100_Q6GG70,UniRef:UniRef50_Q931Q4,UniRef:UniRef90_Q6GG70;ec_number=2.7.6.5
contig_1	Pyrodigal	gene	1748170	1748688	.	-	.	ID=GCA000560365_01686_gene;locus_tag=GCA000560365_01686;gene=apt
contig_1	Pyrodigal	CDS	1748170	1748688	.	-	0	ID=GCA000560365_01686;Name=adenine phosphoribosyltransferase;locus_tag=GCA000560365_01686;product=adenine phosphoribosyltransferase;Dbxref=GO:0002055,GO:0003999,GO:0005737,GO:0006166,GO:0006168,GO:0009116,GO:0016208,GO:0044209;gene=apt;Parent=GCA000560365_01686_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0503,COG:F,KEGG:K00759,RefSeq:WP_000364542.1,SO:0001217,UniParc:UPI000005426F,UniRef:UniRef100_Q2FXU0,UniRef:UniRef50_Q1G9R7,UniRef:UniRef90_Q2FXU0;ec_number=2.4.2.7
contig_1	Pyrodigal	gene	1748710	1750983	.	-	.	ID=GCA000560365_01687_gene;locus_tag=GCA000560365_01687;gene=recJ
contig_1	Pyrodigal	CDS	1748710	1750983	.	-	0	ID=GCA000560365_01687;Name=single-stranded-DNA-specific exonuclease RecJ;locus_tag=GCA000560365_01687;product=single-stranded-DNA-specific exonuclease RecJ;Dbxref=GO:0006281,GO:0006310,GO:0008409;gene=recJ;Parent=GCA000560365_01687_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4199,COG:L,KEGG:K07462,RefSeq:WP_000594993.1,SO:0001217,UniParc:UPI000005426E,UniRef:UniRef100_Q2FXT9,UniRef:UniRef50_A0AAP8TSV1,UniRef:UniRef90_A0A390R1U9;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	1751186	1753465	.	-	.	ID=GCA000560365_01688_gene;locus_tag=GCA000560365_01688;gene=secDF
contig_1	Pyrodigal	CDS	1751186	1753465	.	-	0	ID=GCA000560365_01688;Name=protein translocase subunit SecDF;locus_tag=GCA000560365_01688;product=protein translocase subunit SecDF;gene=secDF;Parent=GCA000560365_01688_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0342,COG:U,RefSeq:WP_000749795.1,SO:0001217,UniParc:UPI00000D7784,UniRef:UniRef100_W8UA89,UniRef:UniRef50_B9E715,UniRef:UniRef90_W8UA89
contig_1	Pyrodigal	gene	1753740	1754000	.	-	.	ID=GCA000560365_01689_gene;locus_tag=GCA000560365_01689;gene=yajC
contig_1	Pyrodigal	CDS	1753740	1754000	.	-	0	ID=GCA000560365_01689;Name=preprotein translocase subunit YajC;locus_tag=GCA000560365_01689;product=preprotein translocase subunit YajC;Dbxref=GO:0005886,GO:0009306,GO:0015450;gene=yajC;Parent=GCA000560365_01689_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1862,COG:U,KEGG:K03210,RefSeq:WP_001160682.1,SO:0001217,UniParc:UPI000005426C,UniRef:UniRef100_Q2FXT7,UniRef:UniRef50_B9DNG6,UniRef:UniRef90_A0A2K4AGL2
contig_1	Pyrodigal	gene	1754019	1755158	.	-	.	ID=GCA000560365_01690_gene;locus_tag=GCA000560365_01690;gene=tgt
contig_1	Pyrodigal	CDS	1754019	1755158	.	-	0	ID=GCA000560365_01690;Name=tRNA guanosine(34) transglycosylase Tgt;locus_tag=GCA000560365_01690;product=tRNA guanosine(34) transglycosylase Tgt;Dbxref=GO:0002099,GO:0005737,GO:0005829,GO:0006400,GO:0008479,GO:0008616,GO:0046872,GO:0101030;gene=tgt;Parent=GCA000560365_01690_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0343,COG:J,KEGG:K00773,RefSeq:WP_001112045.1,SO:0001217,UniParc:UPI0000136CFD,UniRef:UniRef100_Q2FXT6,UniRef:UniRef50_O32053,UniRef:UniRef90_Q2FXT6;ec_number=2.4.2.29
contig_1	Pyrodigal	gene	1755181	1756206	.	-	.	ID=GCA000560365_01691_gene;locus_tag=GCA000560365_01691;gene=queA
contig_1	Pyrodigal	CDS	1755181	1756206	.	-	0	ID=GCA000560365_01691;Name=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;locus_tag=GCA000560365_01691;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;Dbxref=GO:0002099,GO:0005737,GO:0008616,GO:0016740,GO:0016853,GO:0051075;gene=queA;Parent=GCA000560365_01691_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0809,COG:J,KEGG:K07568,RefSeq:WP_001019172.1,SO:0001217,UniParc:UPI00004B5C26,UniRef:UniRef100_Q2FXT5,UniRef:UniRef50_A8AYK5,UniRef:UniRef90_Q2FXT5;ec_number=2.4.99.17
contig_1	Pyrodigal	gene	1756208	1757212	.	-	.	ID=GCA000560365_01692_gene;locus_tag=GCA000560365_01692;gene=ruvB
contig_1	Pyrodigal	CDS	1756208	1757212	.	-	0	ID=GCA000560365_01692;Name=Holliday junction branch migration DNA helicase RuvB;locus_tag=GCA000560365_01692;product=Holliday junction branch migration DNA helicase RuvB;Dbxref=GO:0000400,GO:0003677,GO:0003689,GO:0005524,GO:0005737,GO:0006281,GO:0006310,GO:0009378,GO:0016887,GO:0036121,GO:0048476,GO:0061749,GO:0061775,GO:0140584,GO:0140665,GO:0140849,GO:1990518;gene=ruvB;Parent=GCA000560365_01692_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2255,COG:L,RefSeq:WP_001005767.1,SO:0001217,UniParc:UPI0000054269,UniRef:UniRef100_Q2FXT4,UniRef:UniRef50_O32055,UniRef:UniRef90_Q2FXT4;ec_number=3.6.4.12
contig_1	Pyrodigal	gene	1757244	1757846	.	-	.	ID=GCA000560365_01693_gene;locus_tag=GCA000560365_01693;gene=ruvA
contig_1	Pyrodigal	CDS	1757244	1757846	.	-	0	ID=GCA000560365_01693;Name=Holliday junction branch migration protein RuvA;locus_tag=GCA000560365_01693;product=Holliday junction branch migration protein RuvA;Dbxref=GO:0000400,GO:0003678,GO:0005524,GO:0005737,GO:0006281,GO:0006310,GO:0009378,GO:0009379,GO:0036121,GO:0048476,GO:0061749,GO:1990518;gene=ruvA;Parent=GCA000560365_01693_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0632,COG:L,RefSeq:WP_000271547.1,SO:0001217,UniParc:UPI00004B5C27,UniRef:UniRef100_Q2FXT3,UniRef:UniRef50_Q2FXT3,UniRef:UniRef90_Q2FXT3;ec_number=3.6.4.12
contig_1	Pyrodigal	gene	1757860	1758318	.	-	.	ID=GCA000560365_01694_gene;locus_tag=GCA000560365_01694;gene=pheB
contig_1	Pyrodigal	CDS	1757860	1758318	.	-	0	ID=GCA000560365_01694;Name=ACT domain-containing protein;locus_tag=GCA000560365_01694;product=ACT domain-containing protein;gene=pheB;Parent=GCA000560365_01694_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4492,COG:R,KEGG:K06209,RefSeq:WP_001548994.1,SO:0001217,UniParc:UPI0000054266,UniRef:UniRef100_Q2FXT2,UniRef:UniRef50_Q2FXT2,UniRef:UniRef90_Q2FXT2;ec_number=5.4.99.5
contig_1	Pyrodigal	gene	1758328	1759620	.	-	.	ID=GCA000560365_01695_gene;locus_tag=GCA000560365_01695;gene=obgE
contig_1	Pyrodigal	CDS	1758328	1759620	.	-	0	ID=GCA000560365_01695;Name=GTPase ObgE;locus_tag=GCA000560365_01695;product=GTPase ObgE;Dbxref=GO:0000287,GO:0003924,GO:0005525,GO:0005737,GO:0042254;gene=obgE;Parent=GCA000560365_01695_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0536,COG:DL,RefSeq:WP_000496100.1,SO:0001217,UniParc:UPI00000D7796,UniRef:UniRef100_Q2FXT1,UniRef:UniRef50_P20964,UniRef:UniRef90_Q2FXT1;ec_number=3.6.5.-
contig_1	Pyrodigal	gene	1759975	1760259	.	-	.	ID=GCA000560365_01696_gene;locus_tag=GCA000560365_01696;gene=rpmA
contig_1	Pyrodigal	CDS	1759975	1760259	.	-	0	ID=GCA000560365_01696;Name=50S ribosomal protein L27;locus_tag=GCA000560365_01696;product=50S ribosomal protein L27;Dbxref=GO:0000315,GO:0003735,GO:0006412,GO:0022625;gene=rpmA;Parent=GCA000560365_01696_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0211,COG:J,KEGG:K02899,RefSeq:WP_000916187.1,SO:0001217,UniParc:UPI0000133E1A,UniRef:UniRef100_Q2FXT0,UniRef:UniRef50_Q2FXT0,UniRef:UniRef90_Q2FXT0
contig_1	Pyrodigal	gene	1760271	1760591	.	-	.	ID=GCA000560365_01697_gene;locus_tag=GCA000560365_01697;gene=prp
contig_1	Pyrodigal	CDS	1760271	1760591	.	-	0	ID=GCA000560365_01697;Name=Ribosomal processing cysteine protease Prp;locus_tag=GCA000560365_01697;product=Ribosomal processing cysteine protease Prp;Dbxref=GO:0006508,GO:0008234,GO:0042254;gene=prp;Parent=GCA000560365_01697_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2868,COG:S,KEGG:K07584,RefSeq:WP_000633692.1,SO:0001217,UniParc:UPI0000054263,UniRef:UniRef100_Q2FXS9,UniRef:UniRef50_Q2FXS9,UniRef:UniRef90_Q2FXS9;ec_number=3.4.22.-
contig_1	Pyrodigal	gene	1760597	1760905	.	-	.	ID=GCA000560365_01698_gene;locus_tag=GCA000560365_01698;gene=rplU
contig_1	Pyrodigal	CDS	1760597	1760905	.	-	0	ID=GCA000560365_01698;Name=50S ribosomal protein L21;locus_tag=GCA000560365_01698;product=50S ribosomal protein L21;Dbxref=GO:0003723,GO:0003735,GO:0005737,GO:0005840,GO:0006412,GO:0019843,GO:1990904;gene=rplU;Parent=GCA000560365_01698_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0261,COG:J,KEGG:K02888,RefSeq:WP_000457386.1,SO:0001217,UniParc:UPI00000D766C,UniRef:UniRef100_Q2FXS8,UniRef:UniRef50_Q2FXS8,UniRef:UniRef90_Q2FXS8
contig_1	Infernal	regulatory_region	1760918	1761045	2.1e-05	-	.	ID=KMHODOBJJH_192;Name=Ribosomal protein L21 leader;product=Ribosomal protein L21 leader;Dbxref=RFAM:RF00559;inference=profile:Rfam:RF00559;Note=SO:0000140;regulatory_class=attenuator
contig_1	Pyrodigal	gene	1761072	1761602	.	-	.	ID=GCA000560365_01699_gene;locus_tag=GCA000560365_01699;gene=mreD
contig_1	Pyrodigal	CDS	1761072	1761602	.	-	0	ID=GCA000560365_01699;Name=rod shape-determining protein MreD;locus_tag=GCA000560365_01699;product=rod shape-determining protein MreD;Dbxref=GO:0008360,GO:0016020;gene=mreD;Parent=GCA000560365_01699_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2891,COG:M,RefSeq:WP_001259925.1,SO:0001217,UniParc:UPI00000D7842,UniRef:UniRef100_Q2FXS7,UniRef:UniRef50_A0A0D0RNW4,UniRef:UniRef90_A0A0U1MP65
contig_1	Pyrodigal	gene	1761602	1762444	.	-	.	ID=GCA000560365_01700_gene;locus_tag=GCA000560365_01700;gene=mreC
contig_1	Pyrodigal	CDS	1761602	1762444	.	-	0	ID=GCA000560365_01700;Name=rod shape-determining protein MreC;locus_tag=GCA000560365_01700;product=rod shape-determining protein MreC;Dbxref=GO:0008360;gene=mreC;Parent=GCA000560365_01700_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1792,COG:DZ,KEGG:K03570,RefSeq:WP_000911041.1,SO:0001217,UniParc:UPI00000D78B1,UniRef:UniRef100_Q2FXS6,UniRef:UniRef50_A0A0H2VGM0,UniRef:UniRef90_D7URR5
contig_1	Pyrodigal	gene	1762837	1763310	.	-	.	ID=GCA000560365_01701_gene;locus_tag=GCA000560365_01701
contig_1	Pyrodigal	CDS	1762837	1763310	.	-	0	ID=GCA000560365_01701;Name=DUF4930 domain-containing protein;locus_tag=GCA000560365_01701;product=DUF4930 domain-containing protein;Parent=GCA000560365_01701_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001236735.1,SO:0001217,UniParc:UPI0000054C11,UniRef:UniRef100_Q2FXS4,UniRef:UniRef50_A0A1J3ZXU8,UniRef:UniRef90_Q2FXS4
contig_1	Pyrodigal	gene	1763784	1764068	.	-	.	ID=GCA000560365_01702_gene;locus_tag=GCA000560365_01702
contig_1	Pyrodigal	CDS	1763784	1764068	.	-	0	ID=GCA000560365_01702;Name=MW1603 protein;locus_tag=GCA000560365_01702;product=MW1603 protein;Parent=GCA000560365_01702_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000171859.1,SO:0001217,UniParc:UPI00000D7835,UniRef:UniRef100_Q2FXS3,UniRef:UniRef50_Q2FXS3,UniRef:UniRef90_Q2FXS3
contig_1	Pyrodigal	gene	1764136	1764822	.	-	.	ID=GCA000560365_01703_gene;locus_tag=GCA000560365_01703;gene=radC
contig_1	Pyrodigal	CDS	1764136	1764822	.	-	0	ID=GCA000560365_01703;Name=DNA repair protein RadC;locus_tag=GCA000560365_01703;product=DNA repair protein RadC;Dbxref=GO:0003677,GO:0006281,GO:0006508,GO:0008237,GO:0046872;gene=radC;Parent=GCA000560365_01703_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03630,RefSeq:WP_000692870.1,SO:0001217,UniParc:UPI00001330C5,UniRef:UniRef100_P31337,UniRef:UniRef50_P31337,UniRef:UniRef90_P31337
contig_1	Pyrodigal	gene	1764819	1765526	.	-	.	ID=GCA000560365_01704_gene;locus_tag=GCA000560365_01704;gene=gspO
contig_1	Pyrodigal	CDS	1764819	1765526	.	-	0	ID=GCA000560365_01704;Name=Prepilin peptidase A24 N-terminal domain-containing protein;locus_tag=GCA000560365_01704;product=Prepilin peptidase A24 N-terminal domain-containing protein;gene=gspO;Parent=GCA000560365_01704_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1989,COG:NU,RefSeq:WP_000261115.1,SO:0001217,UniParc:UPI00000D76C4,UniRef:UniRef100_Q2FXS1,UniRef:UniRef50_A0A077UH67,UniRef:UniRef90_Q2FXS1
contig_1	Pyrodigal	gene	1765796	1767067	.	-	.	ID=GCA000560365_01705_gene;locus_tag=GCA000560365_01705;gene=folC
contig_1	Pyrodigal	CDS	1765796	1767067	.	-	0	ID=GCA000560365_01705;Name=tetrahydrofolate synthase;locus_tag=GCA000560365_01705;product=tetrahydrofolate synthase;gene=folC;Parent=GCA000560365_01705_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0285,COG:H,RefSeq:WP_001108346.1,SO:0001217,UniParc:UPI0000054C15,UniRef:UniRef100_Q2FXR9,UniRef:UniRef50_Q2FXR9,UniRef:UniRef90_Q2FXR9
contig_1	Pyrodigal	gene	1767080	1769710	.	-	.	ID=GCA000560365_01706_gene;locus_tag=GCA000560365_01706;gene=valS
contig_1	Pyrodigal	CDS	1767080	1769710	.	-	0	ID=GCA000560365_01706;Name=valine--tRNA ligase;locus_tag=GCA000560365_01706;product=valine--tRNA ligase;Dbxref=GO:0000166,GO:0002161,GO:0004812,GO:0004832,GO:0005524,GO:0005829,GO:0006438;gene=valS;Parent=GCA000560365_01706_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0525,COG:J,RefSeq:WP_000425353.1,SO:0001217,UniParc:UPI0000030ADA,UniRef:UniRef100_Q2FXR8,UniRef:UniRef50_P11931,UniRef:UniRef90_Q2FXR8;ec_number=6.1.1.9
contig_1	Infernal	regulatory_region	1769754	1770055	4.3e-14	-	.	ID=KMHODOBJJH_177;Name=T-box leader;product=T-box leader;Dbxref=RFAM:RF00230;inference=profile:Rfam:RF00230;Note=SO:0000140;regulatory_class=attenuator
contig_1	Pyrodigal	gene	1770113	1770673	.	+	.	ID=GCA000560365_01707_gene;locus_tag=GCA000560365_01707;gene=tag
contig_1	Pyrodigal	CDS	1770113	1770673	.	+	0	ID=GCA000560365_01707;Name=DNA-3-methyladenine glycosylase I;locus_tag=GCA000560365_01707;product=DNA-3-methyladenine glycosylase I;gene=tag;Parent=GCA000560365_01707_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2818,COG:L,KEGG:K01246,RefSeq:WP_001001228.1,SO:0001217,UniParc:UPI00000B45CC,UniRef:UniRef100_Q2FXR7,UniRef:UniRef50_Q2FXR7,UniRef:UniRef90_Q2FXR7;ec_number=3.2.2.20
contig_1	Pyrodigal	gene	1770896	1771963	.	-	.	ID=GCA000560365_01708_gene;locus_tag=GCA000560365_01708;gene=abrB
contig_1	Pyrodigal	CDS	1770896	1771963	.	-	0	ID=GCA000560365_01708;Name=AbrB family transcriptional regulator;locus_tag=GCA000560365_01708;product=AbrB family transcriptional regulator;gene=abrB;Parent=GCA000560365_01708_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3180,COG:R,KEGG:K07120,SO:0001217,UniParc:UPI00015744A1,UniRef:UniRef100_Q2FXR6,UniRef:UniRef50_Q2FXR6,UniRef:UniRef90_Q2FXR6
contig_1	Pyrodigal	gene	1772165	1773451	.	-	.	ID=GCA000560365_01709_gene;locus_tag=GCA000560365_01709;gene=hemL
contig_1	Pyrodigal	CDS	1772165	1773451	.	-	0	ID=GCA000560365_01709;Name=glutamate-1-semialdehyde 2%2C1-aminomutase;locus_tag=GCA000560365_01709;product=glutamate-1-semialdehyde 2%2C1-aminomutase;Dbxref=GO:0005737,GO:0006782,GO:0008483,GO:0030170,GO:0033014,GO:0042286;gene=hemL;Parent=GCA000560365_01709_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0001,COG:H,RefSeq:WP_001270868.1,SO:0001217,UniParc:UPI0000054C19,UniRef:UniRef100_Q2FXR4,UniRef:UniRef50_Q2S1S3,UniRef:UniRef90_Q2FXR4;ec_number=5.4.3.8
contig_1	Pyrodigal	gene	1773499	1774473	.	-	.	ID=GCA000560365_01710_gene;locus_tag=GCA000560365_01710;gene=hemB
contig_1	Pyrodigal	CDS	1773499	1774473	.	-	0	ID=GCA000560365_01710;Name=porphobilinogen synthase;locus_tag=GCA000560365_01710;product=porphobilinogen synthase;Dbxref=GO:0003824,GO:0004655,GO:0005829,GO:0006782,GO:0008270,GO:0033014,GO:0046872;gene=hemB;Parent=GCA000560365_01710_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0113,COG:H,KEGG:K01698,RefSeq:WP_000667126.1,SO:0001217,UniParc:UPI0000054C1A,UniRef:UniRef100_Q2FXR3,UniRef:UniRef50_Q2FXR3,UniRef:UniRef90_Q2FXR3;ec_number=4.2.1.24
contig_1	Pyrodigal	gene	1774476	1775144	.	-	.	ID=GCA000560365_01711_gene;locus_tag=GCA000560365_01711;gene=hemD
contig_1	Pyrodigal	CDS	1774476	1775144	.	-	0	ID=GCA000560365_01711;Name=Uroporphyrinogen-III synthase;locus_tag=GCA000560365_01711;product=Uroporphyrinogen-III synthase;gene=hemD;Parent=GCA000560365_01711_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1587,COG:H,RefSeq:WP_000805950.1,SO:0001217,UniParc:UPI0000054C1B,UniRef:UniRef100_Q2FXR2,UniRef:UniRef50_Q5HNN4,UniRef:UniRef90_A0A390VSB3
contig_1	Pyrodigal	gene	1775166	1776092	.	-	.	ID=GCA000560365_01712_gene;locus_tag=GCA000560365_01712;gene=hemC
contig_1	Pyrodigal	CDS	1775166	1776092	.	-	0	ID=GCA000560365_01712;Name=hydroxymethylbilane synthase;locus_tag=GCA000560365_01712;product=hydroxymethylbilane synthase;Dbxref=GO:0004418,GO:0005737,GO:0006782,GO:0033014;gene=hemC;Parent=GCA000560365_01712_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0181,COG:H,KEGG:K01749,RefSeq:WP_001230228.1,SO:0001217,UniParc:UPI000012C492,UniRef:UniRef100_O34090,UniRef:UniRef50_O34090,UniRef:UniRef90_O34090;ec_number=2.5.1.61
contig_1	Pyrodigal	gene	1776134	1776949	.	-	.	ID=GCA000560365_01713_gene;locus_tag=GCA000560365_01713;gene=ccmC
contig_1	Pyrodigal	CDS	1776134	1776949	.	-	0	ID=GCA000560365_01713;Name=Cytochrome c assembly protein domain-containing protein;locus_tag=GCA000560365_01713;product=Cytochrome c assembly protein domain-containing protein;gene=ccmC;Parent=GCA000560365_01713_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0755,COG:O,KEGG:K02497,RefSeq:WP_001157329.1,SO:0001217,UniParc:UPI0000054C1D,UniRef:UniRef100_Q2FXR0,UniRef:UniRef50_Q2FXR0,UniRef:UniRef90_Q2FXR0
contig_1	Pyrodigal	gene	1776971	1778317	.	-	.	ID=GCA000560365_01714_gene;locus_tag=GCA000560365_01714;gene=hemA
contig_1	Pyrodigal	CDS	1776971	1778317	.	-	0	ID=GCA000560365_01714;Name=glutamyl-tRNA reductase;locus_tag=GCA000560365_01714;product=glutamyl-tRNA reductase;Dbxref=GO:0006782,GO:0008883,GO:0050661;gene=hemA;Parent=GCA000560365_01714_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0373,COG:H,KEGG:K02492,RefSeq:WP_000545451.1,SO:0001217,UniParc:UPI000012C435,UniRef:UniRef100_Q2FG64,UniRef:UniRef50_Q65GJ9,UniRef:UniRef90_Q2FXQ9;ec_number=1.2.1.70
contig_1	Pyrodigal	gene	1778534	1779124	.	-	.	ID=GCA000560365_01715_gene;locus_tag=GCA000560365_01715;gene=yihA
contig_1	Pyrodigal	CDS	1778534	1779124	.	-	0	ID=GCA000560365_01715;Name=ribosome biogenesis GTP-binding protein YihA/YsxC;locus_tag=GCA000560365_01715;product=ribosome biogenesis GTP-binding protein YihA/YsxC;Dbxref=GO:0000917,GO:0003924,GO:0005525,GO:0005737,GO:0005829,GO:0042254,GO:0043022,GO:0046872;gene=yihA;Parent=GCA000560365_01715_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0218,COG:D,RefSeq:WP_000867697.1,SO:0001217,UniParc:UPI0000054C1F,UniRef:UniRef100_Q2FXQ8,UniRef:UniRef50_Q2FXQ8,UniRef:UniRef90_Q2FXQ8
contig_1	Pyrodigal	gene	1779278	1780540	.	-	.	ID=GCA000560365_01716_gene;locus_tag=GCA000560365_01716;gene=clpX
contig_1	Pyrodigal	CDS	1779278	1780540	.	-	0	ID=GCA000560365_01716;Name=ATP-dependent Clp protease ATP-binding subunit ClpX;locus_tag=GCA000560365_01716;product=ATP-dependent Clp protease ATP-binding subunit ClpX;Dbxref=GO:0005524,GO:0008270,GO:0009376,GO:0016887,GO:0046983,GO:0051082,GO:0051301,GO:0051603,GO:0140662;gene=clpX;Parent=GCA000560365_01716_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1219,COG:O,RefSeq:WP_000472302.1,SO:0001217,UniParc:UPI0000054C20,UniRef:UniRef100_Q2FXQ7,UniRef:UniRef50_Q2FXQ7,UniRef:UniRef90_Q2FXQ7
contig_1	Pyrodigal	gene	1780691	1781992	.	-	.	ID=GCA000560365_01717_gene;locus_tag=GCA000560365_01717;gene=tig
contig_1	Pyrodigal	CDS	1780691	1781992	.	-	0	ID=GCA000560365_01717;Name=trigger factor;locus_tag=GCA000560365_01717;product=trigger factor;Dbxref=GO:0003755,GO:0005737,GO:0005854,GO:0015031,GO:0043022,GO:0043335,GO:0044183,GO:0051082,GO:0051083,GO:0051301,GO:0061077,GO:0140839,GO:0140840;gene=tig;Parent=GCA000560365_01717_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0544,COG:O,RefSeq:WP_000127573.1,SO:0001217,UniParc:UPI0000054C21,UniRef:UniRef100_Q2FXQ6,UniRef:UniRef50_P80698,UniRef:UniRef90_Q2FXQ6;ec_number=5.2.1.8
contig_1	Pyrodigal	gene	1782155	1783084	.	-	.	ID=GCA000560365_01718_gene;locus_tag=GCA000560365_01718
contig_1	Pyrodigal	CDS	1782155	1783084	.	-	0	ID=GCA000560365_01718;Name=TPR domain protein;locus_tag=GCA000560365_01718;product=TPR domain protein;Parent=GCA000560365_01718_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001280018.1,SO:0001217,UniParc:UPI00004B5C2A,UniRef:UniRef100_Q2FXQ4,UniRef:UniRef50_Q5HNM7,UniRef:UniRef90_A0A380E4T8
contig_1	Pyrodigal	gene	1783103	1783711	.	-	.	ID=GCA000560365_01719_gene;locus_tag=GCA000560365_01719;gene=ymaB
contig_1	Pyrodigal	CDS	1783103	1783711	.	-	0	ID=GCA000560365_01719;Name=Nudix hydrolase domain-containing protein;locus_tag=GCA000560365_01719;product=Nudix hydrolase domain-containing protein;gene=ymaB;Parent=GCA000560365_01719_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4112,COG:R,RefSeq:WP_000032657.1,SO:0001217,UniParc:UPI0000054C24,UniRef:UniRef100_Q2FXQ3,UniRef:UniRef50_Q2FXQ3,UniRef:UniRef90_Q2FXQ3
contig_1	Pyrodigal	gene	1783853	1784209	.	-	.	ID=GCA000560365_01720_gene;locus_tag=GCA000560365_01720;gene=rplT
contig_1	Pyrodigal	CDS	1783853	1784209	.	-	0	ID=GCA000560365_01720;Name=50S ribosomal protein L20;locus_tag=GCA000560365_01720;product=50S ribosomal protein L20;Dbxref=GO:0000027,GO:0000315,GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:0022625,GO:1990904;gene=rplT;Parent=GCA000560365_01720_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0292,COG:J,RefSeq:WP_001138360.1,SO:0001217,UniParc:UPI0000054C25,UniRef:UniRef100_Q2FXQ1,UniRef:UniRef50_P13070,UniRef:UniRef90_Q49YB0
contig_1	Pyrodigal	gene	1784256	1784456	.	-	.	ID=GCA000560365_01721_gene;locus_tag=GCA000560365_01721;gene=rpmI
contig_1	Pyrodigal	CDS	1784256	1784456	.	-	0	ID=GCA000560365_01721;Name=50S ribosomal protein L35;locus_tag=GCA000560365_01721;product=50S ribosomal protein L35;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0022625;gene=rpmI;Parent=GCA000560365_01721_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0291,COG:J,KEGG:K02916,RefSeq:WP_001125540.1,SO:0001217,UniParc:UPI0000054C26,UniRef:UniRef100_Q2FXQ0,UniRef:UniRef50_P55874,UniRef:UniRef90_Q2FXQ0
contig_1	Pyrodigal	gene	1784485	1785045	.	-	.	ID=GCA000560365_01722_gene;locus_tag=GCA000560365_01722;gene=infC
contig_1	Pyrodigal	CDS	1784485	1785045	.	-	0	ID=GCA000560365_01722;Name=translation initiation factor IF-3;locus_tag=GCA000560365_01722;product=translation initiation factor IF-3;Dbxref=GO:0003743,GO:0005829,GO:0006413,GO:0016020,GO:0032790,GO:0043022;gene=infC;Parent=GCA000560365_01722_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0290,COG:J,SO:0001217,UniParc:UPI0001AB195A,UniRef:UniRef100_A0A0G2LSY7,UniRef:UniRef50_B9DNC6,UniRef:UniRef90_B9DNC6
contig_1	Infernal	regulatory_region	1785041	1785166	3e-12	-	.	ID=KMHODOBJJH_183;Name=Ribosomal protein L20 leader;product=Ribosomal protein L20 leader;Dbxref=RFAM:RF00558;inference=profile:Rfam:RF00558;Note=SO:0000140;regulatory_class=attenuator
contig_1	Pyrodigal	gene	1785241	1786734	.	-	.	ID=GCA000560365_01723_gene;locus_tag=GCA000560365_01723;gene=lysP
contig_1	Pyrodigal	CDS	1785241	1786734	.	-	0	ID=GCA000560365_01723;Name=Amino acid permease/ SLC12A domain-containing protein;locus_tag=GCA000560365_01723;product=Amino acid permease/ SLC12A domain-containing protein;gene=lysP;Parent=GCA000560365_01723_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0833,COG:E,KEGG:K11733,RefSeq:WP_000049154.1,SO:0001217,UniParc:UPI0000054C28,UniRef:UniRef100_Q2FXP8,UniRef:UniRef50_P25737,UniRef:UniRef90_Q2FXP8
contig_1	Infernal	regulatory_region	1786879	1787054	7.4e-18	-	.	ID=KMHODOBJJH_170;Name=Lysine riboswitch aptamer;product=Lysine riboswitch aptamer;Dbxref=RFAM:RF00168;inference=profile:Rfam:RF00168;Note=SO:0000035;regulatory_class=riboswitch
contig_1	Pyrodigal	gene	1787160	1789097	.	-	.	ID=GCA000560365_01724_gene;locus_tag=GCA000560365_01724;gene=thrS
contig_1	Pyrodigal	CDS	1787160	1789097	.	-	0	ID=GCA000560365_01724;Name=threonine--tRNA ligase;locus_tag=GCA000560365_01724;product=threonine--tRNA ligase;Dbxref=GO:0000049,GO:0004829,GO:0005524,GO:0005737,GO:0006435,GO:0016740,GO:0046872;gene=thrS;Parent=GCA000560365_01724_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0441,COG:J,KEGG:K01868,RefSeq:WP_000435132.1,SO:0001217,UniParc:UPI0000030ADF,UniRef:UniRef100_Q2FG54,UniRef:UniRef50_P18255,UniRef:UniRef90_B9DNC9;ec_number=6.1.1.3
contig_1	Pyrodigal	gene	1789510	1790430	.	-	.	ID=GCA000560365_01725_gene;locus_tag=GCA000560365_01725;gene=dnaI
contig_1	Pyrodigal	CDS	1789510	1790430	.	-	0	ID=GCA000560365_01725;Name=primosomal protein DnaI;locus_tag=GCA000560365_01725;product=primosomal protein DnaI;gene=dnaI;Parent=GCA000560365_01725_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1484,COG:L,RefSeq:WP_000808621.1,SO:0001217,UniParc:UPI00000CABBE,UniRef:UniRef100_Q2FXP5,UniRef:UniRef50_Q2FXP5,UniRef:UniRef90_Q2FXP5
contig_1	Pyrodigal	gene	1790430	1791830	.	-	.	ID=GCA000560365_01726_gene;locus_tag=GCA000560365_01726;gene=dnaB2
contig_1	Pyrodigal	CDS	1790430	1791830	.	-	0	ID=GCA000560365_01726;Name=DnaD domain-containing protein;locus_tag=GCA000560365_01726;product=DnaD domain-containing protein;gene=dnaB2;Parent=GCA000560365_01726_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3611,COG:L,KEGG:K03346,RefSeq:WP_000533485.1,SO:0001217,UniParc:UPI0000054C2D,UniRef:UniRef100_Q2FXP4,UniRef:UniRef50_Q2FXP4,UniRef:UniRef90_Q2FXP4
contig_1	Pyrodigal	gene	1791831	1792301	.	-	.	ID=GCA000560365_01727_gene;locus_tag=GCA000560365_01727;gene=nrdR
contig_1	Pyrodigal	CDS	1791831	1792301	.	-	0	ID=GCA000560365_01727;Name=transcriptional regulator NrdR;locus_tag=GCA000560365_01727;product=transcriptional regulator NrdR;Dbxref=GO:0003677,GO:0005524,GO:0006355,GO:0008270,GO:0045892,GO:0140110;gene=nrdR;Parent=GCA000560365_01727_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1327,COG:K,RefSeq:WP_000650082.1,SO:0001217,UniParc:UPI0000054C2E,UniRef:UniRef100_Q2FXP3,UniRef:UniRef50_Q5M5X8,UniRef:UniRef90_Q2FXP3
contig_1	Pyrodigal	gene	1792511	1793536	.	-	.	ID=GCA000560365_01728_gene;locus_tag=GCA000560365_01728;gene=gap
contig_1	Pyrodigal	CDS	1792511	1793536	.	-	0	ID=GCA000560365_01728;Name=type I glyceraldehyde-3-phosphate dehydrogenase;locus_tag=GCA000560365_01728;product=type I glyceraldehyde-3-phosphate dehydrogenase;Dbxref=GO:0004365,GO:0005737,GO:0006006,GO:0006096,GO:0016620,GO:0050661,GO:0051287;gene=gap;Parent=GCA000560365_01728_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0057,COG:G,RefSeq:WP_000106141.1,SO:0001217,UniParc:UPI00000D7659,UniRef:UniRef100_Q5HF86,UniRef:UniRef50_Q6GG19,UniRef:UniRef90_Q5HF86;ec_number=1.2.1.12
contig_1	Pyrodigal	gene	1793706	1794329	.	-	.	ID=GCA000560365_01729_gene;locus_tag=GCA000560365_01729;gene=coaE
contig_1	Pyrodigal	CDS	1793706	1794329	.	-	0	ID=GCA000560365_01729;Name=dephospho-CoA kinase;locus_tag=GCA000560365_01729;product=dephospho-CoA kinase;Dbxref=GO:0004140,GO:0005524,GO:0005737,GO:0015937;gene=coaE;Parent=GCA000560365_01729_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0237,COG:H,KEGG:K00859,RefSeq:WP_001127167.1,SO:0001217,UniParc:UPI0000127CF3,UniRef:UniRef100_Q2FG49,UniRef:UniRef50_Q49YB9,UniRef:UniRef90_Q2FG49;ec_number=2.7.1.24
contig_1	Pyrodigal	gene	1794345	1795217	.	-	.	ID=GCA000560365_01730_gene;locus_tag=GCA000560365_01730;gene=mutM
contig_1	Pyrodigal	CDS	1794345	1795217	.	-	0	ID=GCA000560365_01730;Name=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;locus_tag=GCA000560365_01730;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;Dbxref=GO:0003676,GO:0003684,GO:0003906,GO:0006281,GO:0006284,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gene=mutM;Parent=GCA000560365_01730_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0266,COG:L,KEGG:K10563,RefSeq:WP_001114452.1,SO:0001217,UniParc:UPI0000054C31,UniRef:UniRef100_Q2FXP0,UniRef:UniRef50_A0A7T1B1X4,UniRef:UniRef90_A0A811I2Z9;ec_number=4.2.99.18
contig_1	Pyrodigal	gene	1795233	1797863	.	-	.	ID=GCA000560365_01731_gene;locus_tag=GCA000560365_01731;gene=polA
contig_1	Pyrodigal	CDS	1795233	1797863	.	-	0	ID=GCA000560365_01731;Name=DNA polymerase I;locus_tag=GCA000560365_01731;product=DNA polymerase I;Dbxref=GO:0003676,GO:0003677,GO:0003887,GO:0006261,GO:0008408;gene=polA;Parent=GCA000560365_01731_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0749,COG:L,RefSeq:WP_001038308.1,SO:0001217,UniParc:UPI00000D77CB,UniRef:UniRef100_Q2FXN9,UniRef:UniRef50_K9B5S8,UniRef:UniRef90_A0AAJ4YWX0;ec_number=2.7.7.7
contig_1	Pyrodigal	gene	1798157	1799644	.	-	.	ID=GCA000560365_01732_gene;locus_tag=GCA000560365_01732
contig_1	Pyrodigal	CDS	1798157	1799644	.	-	0	ID=GCA000560365_01732;Name=Glucosyltransferase;locus_tag=GCA000560365_01732;product=Glucosyltransferase;Parent=GCA000560365_01732_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000849439.1,SO:0001217,UniParc:UPI00003B1AEF,UniRef:UniRef100_Q2FXN8,UniRef:UniRef50_Q2FXN8,UniRef:UniRef90_Q2FXN8
contig_1	Pyrodigal	gene	1800143	1801807	.	-	.	ID=GCA000560365_01733_gene;locus_tag=GCA000560365_01733;gene=pnpS
contig_1	Pyrodigal	CDS	1800143	1801807	.	-	0	ID=GCA000560365_01733;Name=two-component system histidine kinase PnpS;locus_tag=GCA000560365_01733;product=two-component system histidine kinase PnpS;Dbxref=GO:0000155,GO:0016310;gene=pnpS;Parent=GCA000560365_01733_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5002,COG:T,SO:0001217,UniParc:UPI0000054C34,UniRef:UniRef100_Q2FXN7,UniRef:UniRef50_A0A380G833,UniRef:UniRef90_A0A7H9C746
contig_1	Pyrodigal	gene	1801804	1802508	.	-	.	ID=GCA000560365_01734_gene;locus_tag=GCA000560365_01734;gene=ompR
contig_1	Pyrodigal	CDS	1801804	1802508	.	-	0	ID=GCA000560365_01734;Name=Alkaline phosphatase synthesis transcriptional regulatory protein;locus_tag=GCA000560365_01734;product=Alkaline phosphatase synthesis transcriptional regulatory protein;gene=ompR;Parent=GCA000560365_01734_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0745,COG:TK,RefSeq:WP_000080028.1,SO:0001217,UniParc:UPI000002E89E,UniRef:UniRef100_Q2FXN6,UniRef:UniRef50_A0A9D3AXH1,UniRef:UniRef90_A0A0S3E1C9
contig_1	Pyrodigal	gene	1802898	1804166	.	-	.	ID=GCA000560365_01735_gene;locus_tag=GCA000560365_01735;gene=icd
contig_1	Pyrodigal	CDS	1802898	1804166	.	-	0	ID=GCA000560365_01735;Name=NADP-dependent isocitrate dehydrogenase;locus_tag=GCA000560365_01735;product=NADP-dependent isocitrate dehydrogenase;Dbxref=GO:0000287,GO:0004450,GO:0006097,GO:0006099,GO:0051287;gene=icd;Parent=GCA000560365_01735_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0538,RefSeq:WP_000123165.1,SO:0001217,UniParc:UPI0000054C35,UniRef:UniRef100_Q5HF79,UniRef:UniRef50_Q5HNL1,UniRef:UniRef90_Q8NW61;ec_number=1.1.1.42
contig_1	Pyrodigal	gene	1804215	1805336	.	-	.	ID=GCA000560365_01736_gene;locus_tag=GCA000560365_01736;gene=gltA
contig_1	Pyrodigal	CDS	1804215	1805336	.	-	0	ID=GCA000560365_01736;Name=citrate synthase;locus_tag=GCA000560365_01736;product=citrate synthase;gene=gltA;Parent=GCA000560365_01736_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0372,RefSeq:WP_000829167.1,SO:0001217,UniParc:UPI00000D76BC,UniRef:UniRef100_W8U5A3,UniRef:UniRef50_P39120,UniRef:UniRef90_W8U5A3
contig_1	Pyrodigal	gene	1805684	1807045	.	+	.	ID=GCA000560365_01737_gene;locus_tag=GCA000560365_01737;gene=ansP
contig_1	Pyrodigal	CDS	1805684	1807045	.	+	0	ID=GCA000560365_01737;Name=Amino acid permease/ SLC12A domain-containing protein;locus_tag=GCA000560365_01737;product=Amino acid permease/ SLC12A domain-containing protein;gene=ansP;Parent=GCA000560365_01737_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1113,COG:E,RefSeq:WP_000818525.1,SO:0001217,UniParc:UPI00000522DA,UniRef:UniRef100_Q2FXN2,UniRef:UniRef50_Q2FXN2,UniRef:UniRef90_Q2FXN2
contig_1	Pyrodigal	gene	1807078	1807884	.	-	.	ID=GCA000560365_01738_gene;locus_tag=GCA000560365_01738
contig_1	Pyrodigal	CDS	1807078	1807884	.	-	0	ID=GCA000560365_01738;Name=IS1182 family transposase;locus_tag=GCA000560365_01738;product=IS1182 family transposase;Dbxref=GO:0004803;Parent=GCA000560365_01738_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07487,RefSeq:WP_001549023.1,SO:0001217,UniParc:UPI000069AAE0,UniRef:UniRef100_Q2FXN1,UniRef:UniRef50_A0A9P2Z0V2,UniRef:UniRef90_A0AAN1ZQC3
contig_1	Pyrodigal	gene	1807902	1808729	.	-	.	ID=GCA000560365_01739_gene;locus_tag=GCA000560365_01739
contig_1	Pyrodigal	CDS	1807902	1808729	.	-	0	ID=GCA000560365_01739;Name=Truncated transposase%2C putative;locus_tag=GCA000560365_01739;product=Truncated transposase%2C putative;Parent=GCA000560365_01739_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000054C38,UniRef:UniRef100_Q2FXN0,UniRef:UniRef50_Q2FXN0,UniRef:UniRef90_Q2FXN0
contig_1	Infernal	gene	1808766	1809003	.	+	.	ID=GCA000560365_01740_gene;locus_tag=GCA000560365_01740;gene=tsr24
contig_1	Infernal	ncRNA	1808766	1809003	1.5e-39	+	.	ID=GCA000560365_01740;Name=S. aureus tsr24 small RNA;locus_tag=GCA000560365_01740;product=S. aureus tsr24 small RNA;Dbxref=RFAM:RF02577;Parent=GCA000560365_01740_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02577
contig_1	Pyrodigal	gene	1809370	1811127	.	-	.	ID=GCA000560365_01741_gene;locus_tag=GCA000560365_01741;gene=pyk
contig_1	Pyrodigal	CDS	1809370	1811127	.	-	0	ID=GCA000560365_01741;Name=pyruvate kinase;locus_tag=GCA000560365_01741;product=pyruvate kinase;Dbxref=GO:0000287,GO:0004743,GO:0005524,GO:0006096,GO:0016301,GO:0030955;gene=pyk;Parent=GCA000560365_01741_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3848,COG:T,KEGG:K00873,RefSeq:WP_001232648.1,SO:0001217,UniParc:UPI00000522A3,UniRef:UniRef100_Q2FXM9,UniRef:UniRef50_Q02499,UniRef:UniRef90_Q2FXM9;ec_number=2.7.1.40
contig_1	Pyrodigal	gene	1811149	1812117	.	-	.	ID=GCA000560365_01742_gene;locus_tag=GCA000560365_01742;gene=pfkA
contig_1	Pyrodigal	CDS	1811149	1812117	.	-	0	ID=GCA000560365_01742;Name=6-phosphofructokinase;locus_tag=GCA000560365_01742;product=6-phosphofructokinase;Dbxref=GO:0003872,GO:0005524,GO:0005945,GO:0006002,GO:0006096,GO:0016208,GO:0030388,GO:0042802,GO:0046872,GO:0048029,GO:0061621,GO:0070095;gene=pfkA;Parent=GCA000560365_01742_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0205,COG:G,KEGG:K00850,RefSeq:WP_000717561.1,SO:0001217,UniParc:UPI0000054C39,UniRef:UniRef100_Q2FXM8,UniRef:UniRef50_Q2FXM8,UniRef:UniRef90_Q2FXM8;ec_number=2.7.1.11
contig_1	Pyrodigal	gene	1812386	1813330	.	-	.	ID=GCA000560365_01743_gene;locus_tag=GCA000560365_01743;gene=accA
contig_1	Pyrodigal	CDS	1812386	1813330	.	-	0	ID=GCA000560365_01743;Name=acetyl-CoA carboxylase carboxyltransferase subunit alpha;locus_tag=GCA000560365_01743;product=acetyl-CoA carboxylase carboxyltransferase subunit alpha;Dbxref=GO:0003989,GO:0005524,GO:0006633,GO:0009317,GO:0016743,GO:2001295;gene=accA;Parent=GCA000560365_01743_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0825,COG:I,RefSeq:WP_000883645.1,SO:0001217,UniParc:UPI0000054C3A,UniRef:UniRef100_Q2FXM7,UniRef:UniRef50_Q9HXZ2,UniRef:UniRef90_Q2FXM7;ec_number=6.4.1.2
contig_1	Pyrodigal	gene	1813330	1814187	.	-	.	ID=GCA000560365_01744_gene;locus_tag=GCA000560365_01744;gene=accD
contig_1	Pyrodigal	CDS	1813330	1814187	.	-	0	ID=GCA000560365_01744;Name=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;locus_tag=GCA000560365_01744;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;Dbxref=GO:0003989,GO:0005524,GO:0006633,GO:0008270,GO:0009317,GO:0016743,GO:2001295;gene=accD;Parent=GCA000560365_01744_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0777,COG:I,RefSeq:WP_000471571.1,SO:0001217,UniParc:UPI0000054C3B,UniRef:UniRef100_Q2FXM6,UniRef:UniRef50_C0SP93,UniRef:UniRef90_Q2FXM6;ec_number=6.4.1.2
contig_1	Pyrodigal	gene	1814382	1815611	.	-	.	ID=GCA000560365_01745_gene;locus_tag=GCA000560365_01745;gene=sfcA
contig_1	Pyrodigal	CDS	1814382	1815611	.	-	0	ID=GCA000560365_01745;Name=NADP-dependent malic enzyme (Conversion of malate into pyruvate);locus_tag=GCA000560365_01745;product=NADP-dependent malic enzyme (Conversion of malate into pyruvate);gene=sfcA;Parent=GCA000560365_01745_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0281,RefSeq:WP_000058383.1,SO:0001217,UniParc:UPI0000054C3C,UniRef:UniRef100_Q2FXM5,UniRef:UniRef50_A0A2U3KL65,UniRef:UniRef90_A0A7U7PYW9
contig_1	Pyrodigal	gene	1816061	1819258	.	-	.	ID=GCA000560365_01746_gene;locus_tag=GCA000560365_01746;gene=dnaE
contig_1	Pyrodigal	CDS	1816061	1819258	.	-	0	ID=GCA000560365_01746;Name=DNA polymerase III subunit alpha;locus_tag=GCA000560365_01746;product=DNA polymerase III subunit alpha;Dbxref=GO:0003676,GO:0003887,GO:0005737,GO:0006260,GO:0008408;gene=dnaE;Parent=GCA000560365_01746_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0587,COG:L,RefSeq:WP_000226911.1,SO:0001217,UniParc:UPI00004B5C2B,UniRef:UniRef100_Q5HF71,UniRef:UniRef50_Q9F1K0,UniRef:UniRef90_Q9F1K0;ec_number=2.7.7.7
contig_1	Pyrodigal	gene	1819279	1820220	.	-	.	ID=GCA000560365_01747_gene;locus_tag=GCA000560365_01747;gene=pde2
contig_1	Pyrodigal	CDS	1819279	1820220	.	-	0	ID=GCA000560365_01747;Name=pApA hydrolase Pde2;locus_tag=GCA000560365_01747;product=pApA hydrolase Pde2;gene=pde2;Parent=GCA000560365_01747_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000626074,COG:COG0618,COG:FT,KEGG:K06881,RefSeq:WP_000626074.1,SO:0001217,UniParc:UPI00000D9E7E,UniRef:UniRef100_Q2FXM3,UniRef:UniRef50_A0A7U7JV59,UniRef:UniRef90_A0A0U1MNX7;ec_number=3.1.3.7
contig_1	Pyrodigal	gene	1820481	1821779	.	-	.	ID=GCA000560365_01748_gene;locus_tag=GCA000560365_01748;gene=ytoI
contig_1	Pyrodigal	CDS	1820481	1821779	.	-	0	ID=GCA000560365_01748;Name=CBS domain-containing protein;locus_tag=GCA000560365_01748;product=CBS domain-containing protein;gene=ytoI;Parent=GCA000560365_01748_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4109,COG:K,RefSeq:WP_000160435.1,SO:0001217,UniParc:UPI0000054C3F,UniRef:UniRef100_Q2FXM2,UniRef:UniRef50_A0A7U7JV62,UniRef:UniRef90_A0A7U7JV62
contig_1	Pyrodigal	gene	1821984	1822397	.	+	.	ID=GCA000560365_01749_gene;locus_tag=GCA000560365_01749;gene=uspA
contig_1	Pyrodigal	CDS	1821984	1822397	.	+	0	ID=GCA000560365_01749;Name=UspA domain-containing protein;locus_tag=GCA000560365_01749;product=UspA domain-containing protein;gene=uspA;Parent=GCA000560365_01749_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0589,COG:T,RefSeq:WP_000277602.1,SO:0001217,UniParc:UPI00000D7756,UniRef:UniRef100_Q2FXM1,UniRef:UniRef50_Q2FXM1,UniRef:UniRef90_Q2FXM1
contig_1	Pyrodigal	gene	1822702	1823391	.	-	.	ID=GCA000560365_01750_gene;locus_tag=GCA000560365_01750;gene=ulaG
contig_1	Pyrodigal	CDS	1822702	1823391	.	-	0	ID=GCA000560365_01750;Name=metal-dependent hydrolase;locus_tag=GCA000560365_01750;product=metal-dependent hydrolase;Dbxref=GO:0016787;gene=ulaG;Parent=GCA000560365_01750_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2220,COG:G,RefSeq:WP_000777188.1,SO:0001217,UniParc:UPI000013B147,UniRef:UniRef100_Q2FXM0,UniRef:UniRef50_Q2FXM0,UniRef:UniRef90_Q2FXM0
contig_1	Pyrodigal	gene	1823566	1824621	.	+	.	ID=GCA000560365_01751_gene;locus_tag=GCA000560365_01751;gene=pepP
contig_1	Pyrodigal	CDS	1823566	1824621	.	+	0	ID=GCA000560365_01751;Name=putative peptidase SAUSA300_1654;locus_tag=GCA000560365_01751;product=putative peptidase SAUSA300_1654;Dbxref=GO:0016787,GO:0046872;gene=pepP;Parent=GCA000560365_01751_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0006,COG:E,RefSeq:WP_000161661.1,SO:0001217,UniParc:UPI00004B5C2C,UniRef:UniRef100_Q2FXL9,UniRef:UniRef50_Q7A552,UniRef:UniRef90_Q7A552;ec_number=3.4.-.-
contig_1	Pyrodigal	gene	1824937	1826055	.	-	.	ID=GCA000560365_01752_gene;locus_tag=GCA000560365_01752;gene=ald
contig_1	Pyrodigal	CDS	1824937	1826055	.	-	0	ID=GCA000560365_01752;Name=alanine dehydrogenase;locus_tag=GCA000560365_01752;product=alanine dehydrogenase;Dbxref=GO:0000286,GO:0005886,GO:0042853;gene=ald;Parent=GCA000560365_01752_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0686,COG:E,KEGG:K00259,RefSeq:WP_000689998.1,SO:0001217,UniParc:UPI00000D9E81,UniRef:UniRef100_Q2FXL7,UniRef:UniRef50_P17556,UniRef:UniRef90_Q2FXL7;ec_number=1.4.1.1
contig_1	Pyrodigal	gene	1826196	1826696	.	+	.	ID=GCA000560365_01753_gene;locus_tag=GCA000560365_01753;gene=uspA
contig_1	Pyrodigal	CDS	1826196	1826696	.	+	0	ID=GCA000560365_01753;Name=Putative universal stress protein MW1653;locus_tag=GCA000560365_01753;product=Putative universal stress protein MW1653;Dbxref=GO:0005737;gene=uspA;Parent=GCA000560365_01753_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0589,COG:T,RefSeq:WP_000634175.1,SO:0001217,UniParc:UPI0000054C46,UniRef:UniRef100_Q2FXL6,UniRef:UniRef50_Q2FXL6,UniRef:UniRef90_Q2FXL6
contig_1	Pyrodigal	gene	1826942	1828144	.	-	.	ID=GCA000560365_01754_gene;locus_tag=GCA000560365_01754;gene=ackA
contig_1	Pyrodigal	CDS	1826942	1828144	.	-	0	ID=GCA000560365_01754;Name=Acetate kinase;locus_tag=GCA000560365_01754;product=Acetate kinase;Dbxref=GO:0000287,GO:0005524,GO:0005737,GO:0006083,GO:0006085,GO:0008776;gene=ackA;Parent=GCA000560365_01754_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0282,KEGG:K00925,RefSeq:WP_000040069.1,SO:0001217,UniParc:UPI000012529B,UniRef:UniRef100_Q2FXL5,UniRef:UniRef50_O52594,UniRef:UniRef90_Q2FXL5;ec_number=2.7.2.1
contig_1	Pyrodigal	gene	1828232	1829179	.	-	.	ID=GCA000560365_01755_gene;locus_tag=GCA000560365_01755;gene=ytxK
contig_1	Pyrodigal	CDS	1828232	1829179	.	-	0	ID=GCA000560365_01755;Name=Adenine-specific methyltransferase;locus_tag=GCA000560365_01755;product=Adenine-specific methyltransferase;gene=ytxK;Parent=GCA000560365_01755_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0827,COG:L,RefSeq:WP_000840574.1,SO:0001217,UniParc:UPI00000D9E82,UniRef:UniRef100_Q2FXL4,UniRef:UniRef50_B9DN82,UniRef:UniRef90_A0A077UL38
contig_1	Pyrodigal	gene	1829302	1829796	.	-	.	ID=GCA000560365_01756_gene;locus_tag=GCA000560365_01756;gene=tpx
contig_1	Pyrodigal	CDS	1829302	1829796	.	-	0	ID=GCA000560365_01756;Name=thiol peroxidase;locus_tag=GCA000560365_01756;product=thiol peroxidase;Dbxref=GO:0008379,GO:0016684;gene=tpx;Parent=GCA000560365_01756_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2077,COG:O,KEGG:K11065,RefSeq:WP_000136253.1,SO:0001217,UniParc:UPI000013729F,UniRef:UniRef100_Q5HF61,UniRef:UniRef50_P80864,UniRef:UniRef90_P66954;ec_number=1.11.1.24
contig_1	Pyrodigal	gene	1829894	1830664	.	-	.	ID=GCA000560365_01757_gene;locus_tag=GCA000560365_01757;gene=tauE
contig_1	Pyrodigal	CDS	1829894	1830664	.	-	0	ID=GCA000560365_01757;Name=putative membrane transporter protein;locus_tag=GCA000560365_01757;product=putative membrane transporter protein;gene=tauE;Parent=GCA000560365_01757_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0730,COG:P,RefSeq:WP_000365320.1,SO:0001217,UniParc:UPI0000054C4B,UniRef:UniRef100_Q2FXL2,UniRef:UniRef50_A0A239TZL2,UniRef:UniRef90_A0A391DGZ3
contig_1	Pyrodigal	gene	1830708	1831931	.	-	.	ID=GCA000560365_01758_gene;locus_tag=GCA000560365_01758;gene=thiI
contig_1	Pyrodigal	CDS	1830708	1831931	.	-	0	ID=GCA000560365_01758;Name=putative tRNA sulfurtransferase;locus_tag=GCA000560365_01758;product=putative tRNA sulfurtransferase;Dbxref=GO:0000049,GO:0002937,GO:0004810,GO:0005524,GO:0005829,GO:0009228,GO:0009229,GO:0052837,GO:0140741;gene=thiI;Parent=GCA000560365_01758_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0301,COG:HJ,KEGG:K03151,RefSeq:WP_000872653.1,SO:0001217,UniParc:UPI0000054C4C,UniRef:UniRef100_Q2FXL1,UniRef:UniRef50_Q2FXL1,UniRef:UniRef90_Q2FXL1;ec_number=2.8.1.4
contig_1	Pyrodigal	gene	1831931	1833097	.	-	.	ID=GCA000560365_01759_gene;locus_tag=GCA000560365_01759;gene=nifS
contig_1	Pyrodigal	CDS	1831931	1833097	.	-	0	ID=GCA000560365_01759;Name=Aminotransferase;locus_tag=GCA000560365_01759;product=Aminotransferase;gene=nifS;Parent=GCA000560365_01759_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1104,COG:E,SO:0001217,UniParc:UPI0001B3AAB6,UniRef:UniRef100_A0A0D6HH30,UniRef:UniRef50_A0A0D6HH30,UniRef:UniRef90_A0A0D6HH30
contig_1	Pyrodigal	gene	1833442	1835136	.	-	.	ID=GCA000560365_01760_gene;locus_tag=GCA000560365_01760;gene=ezrA
contig_1	Pyrodigal	CDS	1833442	1835136	.	-	0	ID=GCA000560365_01760;Name=septation ring formation regulator EzrA;locus_tag=GCA000560365_01760;product=septation ring formation regulator EzrA;Dbxref=GO:0000917,GO:0000921,GO:0005886,GO:0005940;gene=ezrA;Parent=GCA000560365_01760_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4477,COG:D,KEGG:K06286,RefSeq:WP_000244865.1,SO:0001217,UniParc:UPI0000054C4F,UniRef:UniRef100_Q2FG20,UniRef:UniRef50_Q5HNI8,UniRef:UniRef90_P64002
contig_1	Pyrodigal	gene	1835273	1835737	.	+	.	ID=GCA000560365_01761_gene;locus_tag=GCA000560365_01761;gene=msrC
contig_1	Pyrodigal	CDS	1835273	1835737	.	+	0	ID=GCA000560365_01761;Name=GAF domain-containing protein;locus_tag=GCA000560365_01761;product=GAF domain-containing protein;gene=msrC;Parent=GCA000560365_01761_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1956,COG:VT,RefSeq:WP_000207845.1,SO:0001217,UniParc:UPI00004B5C2F,UniRef:UniRef100_Q2FXK7,UniRef:UniRef50_A0A0A5FWD3,UniRef:UniRef90_A0A0U1MMX1
contig_1	Pyrodigal	gene	1835981	1836583	.	+	.	ID=GCA000560365_01762_gene;locus_tag=GCA000560365_01762;gene=rpsD
contig_1	Pyrodigal	CDS	1835981	1836583	.	+	0	ID=GCA000560365_01762;Name=30S ribosomal protein S4;locus_tag=GCA000560365_01762;product=30S ribosomal protein S4;Dbxref=GO:0003735,GO:0006412,GO:0015935,GO:0019843,GO:0042274;gene=rpsD;Parent=GCA000560365_01762_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0522,COG:J,KEGG:K02986,RefSeq:WP_000090512.1,SO:0001217,UniParc:UPI0000135022,UniRef:UniRef100_Q2FXK6,UniRef:UniRef50_P21466,UniRef:UniRef90_Q2FXK6
contig_1	Pyrodigal	gene	1836799	1837542	.	-	.	ID=GCA000560365_01763_gene;locus_tag=GCA000560365_01763;gene=ugpQ
contig_1	Pyrodigal	CDS	1836799	1837542	.	-	0	ID=GCA000560365_01763;Name=GP-PDE domain-containing protein;locus_tag=GCA000560365_01763;product=GP-PDE domain-containing protein;gene=ugpQ;Parent=GCA000560365_01763_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0584,COG:I,KEGG:K01126,RefSeq:WP_000174282.1,SO:0001217,UniParc:UPI000005439B,UniRef:UniRef100_Q2FXK4,UniRef:UniRef50_Q2FXK4,UniRef:UniRef90_Q2FXK4;ec_number=3.1.4.46
contig_1	Pyrodigal	gene	1837622	1838068	.	+	.	ID=GCA000560365_01764_gene;locus_tag=GCA000560365_01764;gene=osmC
contig_1	Pyrodigal	CDS	1837622	1838068	.	+	0	ID=GCA000560365_01764;Name=Organic hydroperoxide resistance protein;locus_tag=GCA000560365_01764;product=Organic hydroperoxide resistance protein;gene=osmC;Parent=GCA000560365_01764_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1764,COG:V,RefSeq:WP_000553926.1,SO:0001217,UniParc:UPI00004B5C30,UniRef:UniRef100_Q2FXK3,UniRef:UniRef50_B9DN81,UniRef:UniRef90_A0A0D1JRC2
contig_1	Pyrodigal	gene	1838182	1839342	.	+	.	ID=GCA000560365_01765_gene;locus_tag=GCA000560365_01765;gene=pucG
contig_1	Pyrodigal	CDS	1838182	1839342	.	+	0	ID=GCA000560365_01765;Name=Aminotransferase class V domain-containing protein;locus_tag=GCA000560365_01765;product=Aminotransferase class V domain-containing protein;gene=pucG;Parent=GCA000560365_01765_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0075,COG:EF,RefSeq:WP_000291415.1,SO:0001217,UniParc:UPI0000054399,UniRef:UniRef100_Q2FXK2,UniRef:UniRef50_Q2FXK2,UniRef:UniRef90_Q2FXK2
contig_1	Pyrodigal	gene	1839329	1840933	.	+	.	ID=GCA000560365_01766_gene;locus_tag=GCA000560365_01766;gene=serA
contig_1	Pyrodigal	CDS	1839329	1840933	.	+	0	ID=GCA000560365_01766;Name=phosphoglycerate dehydrogenase;locus_tag=GCA000560365_01766;product=phosphoglycerate dehydrogenase;Dbxref=GO:0004617,GO:0006564;gene=serA;Parent=GCA000560365_01766_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1760,COG:E,RefSeq:WP_000808845.1,SO:0001217,UniParc:UPI0000054398,UniRef:UniRef100_Q2FXK1,UniRef:UniRef50_B9DN70,UniRef:UniRef90_A0A3A5LA45;ec_number=1.1.1.95
contig_1	Pyrodigal	gene	1841083	1842213	.	-	.	ID=GCA000560365_01767_gene;locus_tag=GCA000560365_01767;gene=gph
contig_1	Pyrodigal	CDS	1841083	1842213	.	-	0	ID=GCA000560365_01767;Name=HAD family hydrolase;locus_tag=GCA000560365_01767;product=HAD family hydrolase;gene=gph;Parent=GCA000560365_01767_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0546,RefSeq:WP_000721707.1,SO:0001217,UniParc:UPI00000D9E8A,UniRef:UniRef100_Q2FXJ9,UniRef:UniRef50_A0A6N3EB75,UniRef:UniRef90_A0A389U3P7
contig_1	Pyrodigal	gene	1842320	1843786	.	-	.	ID=GCA000560365_01768_gene;locus_tag=GCA000560365_01768;gene=ptsG2
contig_1	Pyrodigal	CDS	1842320	1843786	.	-	0	ID=GCA000560365_01768;Name=N-acetylglucosamine-specific PTS transporter subunit IIBC;locus_tag=GCA000560365_01768;product=N-acetylglucosamine-specific PTS transporter subunit IIBC;gene=ptsG2;Parent=GCA000560365_01768_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1264,COG:G,RefSeq:WP_000276371.1,SO:0001217,UniParc:UPI0000696C65,UniRef:UniRef100_A0A1S6DFN8,UniRef:UniRef50_A0A2Y2SMF5,UniRef:UniRef90_A0A2Y2SMF5
contig_1	Pyrodigal	gene	1843914	1844531	.	-	.	ID=GCA000560365_01769_gene;locus_tag=GCA000560365_01769;gene=plsC
contig_1	Pyrodigal	CDS	1843914	1844531	.	-	0	ID=GCA000560365_01769;Name=1-acyl-sn-glycerol-3-phosphate acyltransferase;locus_tag=GCA000560365_01769;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;gene=plsC;Parent=GCA000560365_01769_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0204,COG:I,RefSeq:WP_000287588.1,SO:0001217,UniParc:UPI0000054395,UniRef:UniRef100_Q2FXJ7,UniRef:UniRef50_A0A1D4JQG0,UniRef:UniRef90_A0A2K4AFG9
contig_1	Pyrodigal	gene	1844703	1845977	.	+	.	ID=GCA000560365_01770_gene;locus_tag=GCA000560365_01770;gene=degQ
contig_1	Pyrodigal	CDS	1844703	1845977	.	+	0	ID=GCA000560365_01770;Name=Serine protease HtrA-like;locus_tag=GCA000560365_01770;product=Serine protease HtrA-like;gene=degQ;Parent=GCA000560365_01770_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0265,COG:O,RefSeq:WP_001279338.1,SO:0001217,UniParc:UPI000005224B,UniRef:UniRef100_Q2FXJ6,UniRef:UniRef50_A0A380HKD8,UniRef:UniRef90_A0A2K4AFG2
contig_1	Pyrodigal	gene	1846071	1847333	.	-	.	ID=GCA000560365_01771_gene;locus_tag=GCA000560365_01771;gene=tyrS
contig_1	Pyrodigal	CDS	1846071	1847333	.	-	0	ID=GCA000560365_01771;Name=tyrosine--tRNA ligase;locus_tag=GCA000560365_01771;product=tyrosine--tRNA ligase;Dbxref=GO:0000166,GO:0003723,GO:0004831,GO:0005524,GO:0005829,GO:0006437;gene=tyrS;Parent=GCA000560365_01771_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0162,COG:J,KEGG:K01866,RefSeq:WP_000186029.1,SO:0001217,UniParc:UPI000002E8ED,UniRef:UniRef100_Q2FXJ5,UniRef:UniRef50_Q2FXJ5,UniRef:UniRef90_Q2FXJ5;ec_number=6.1.1.1
contig_1	Pyrodigal	gene	1847715	1848620	.	+	.	ID=GCA000560365_01772_gene;locus_tag=GCA000560365_01772;gene=mrcB
contig_1	Pyrodigal	CDS	1847715	1848620	.	+	0	ID=GCA000560365_01772;Name=peptidoglycan glycosyltransferase;locus_tag=GCA000560365_01772;product=peptidoglycan glycosyltransferase;gene=mrcB;Parent=GCA000560365_01772_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0744,COG:M,KEGG:K12551,RefSeq:WP_000184370.1,SO:0001217,UniParc:UPI0000054394,UniRef:UniRef100_Q2FXJ4,UniRef:UniRef50_G5JFR8,UniRef:UniRef90_A0A6B0D5L6;ec_number=2.4.99.28
contig_1	Pyrodigal	gene	1848823	1850199	.	-	.	ID=GCA000560365_01773_gene;locus_tag=GCA000560365_01773
contig_1	Pyrodigal	CDS	1848823	1850199	.	-	0	ID=GCA000560365_01773;Name=Cell wall surface anchor family protein;locus_tag=GCA000560365_01773;product=Cell wall surface anchor family protein;Parent=GCA000560365_01773_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00044A8C13,UniRef:UniRef100_A0A380EIZ9,UniRef:UniRef50_A0A380EIZ9,UniRef:UniRef90_A0A380EIZ9
contig_1	Pyrodigal	gene	1850274	1851509	.	-	.	ID=GCA000560365_01774_gene;locus_tag=GCA000560365_01774
contig_1	Pyrodigal	CDS	1850274	1851509	.	-	0	ID=GCA000560365_01774;Name=Cell wall surface anchor family protein;locus_tag=GCA000560365_01774;product=Cell wall surface anchor family protein;Parent=GCA000560365_01774_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A380DVP7,UniRef:UniRef90_A0A380DVP7
contig_1	Infernal	gene	1851525	1851581	.	+	.	ID=GCA000560365_01775_gene;locus_tag=GCA000560365_01775;gene=rsaB
contig_1	Infernal	ncRNA	1851525	1851581	3.5e-13	+	.	ID=GCA000560365_01775;Name=RNA Staph. aureus A;locus_tag=GCA000560365_01775;gene=rsaB;product=RNA Staph. aureus A;Dbxref=RFAM:RF01817;Parent=GCA000560365_01775_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01817
contig_1	Pyrodigal	gene	1851805	1853472	.	-	.	ID=GCA000560365_01776_gene;locus_tag=GCA000560365_01776;gene=fhs
contig_1	Pyrodigal	CDS	1851805	1853472	.	-	0	ID=GCA000560365_01776;Name=formate--tetrahydrofolate ligase;locus_tag=GCA000560365_01776;product=formate--tetrahydrofolate ligase;Dbxref=GO:0004329,GO:0005524,GO:0035999;gene=fhs;Parent=GCA000560365_01776_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2759,COG:F,RefSeq:WP_000149404.1,SO:0001217,UniParc:UPI0000696C66,UniRef:UniRef100_Q2FG06,UniRef:UniRef50_Q5HF42,UniRef:UniRef90_Q5HF42;ec_number=6.3.4.3
contig_1	Pyrodigal	gene	1853913	1855619	.	-	.	ID=GCA000560365_01777_gene;locus_tag=GCA000560365_01777;gene=acsA
contig_1	Pyrodigal	CDS	1853913	1855619	.	-	0	ID=GCA000560365_01777;Name=acetate--CoA ligase;locus_tag=GCA000560365_01777;product=acetate--CoA ligase;gene=acsA;Parent=GCA000560365_01777_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000862083.1,SO:0001217,UniParc:UPI0000054390,UniRef:UniRef100_A0A0H3KH25,UniRef:UniRef50_P39062,UniRef:UniRef90_A0A6H4CW26;ec_number=6.2.1.1
contig_1	Pyrodigal	gene	1855788	1856420	.	+	.	ID=GCA000560365_01778_gene;locus_tag=GCA000560365_01778
contig_1	Pyrodigal	CDS	1855788	1856420	.	+	0	ID=GCA000560365_01778;Name=N-acetyltransferase domain-containing protein;locus_tag=GCA000560365_01778;product=N-acetyltransferase domain-containing protein;Parent=GCA000560365_01778_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K04766,RefSeq:WP_001015996.1,SO:0001217,UniParc:UPI000005438F,UniRef:UniRef100_Q2G293,UniRef:UniRef50_P39065,UniRef:UniRef90_Q2G293;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	1856445	1857614	.	+	.	ID=GCA000560365_01779_gene;locus_tag=GCA000560365_01779;gene=acuC
contig_1	Pyrodigal	CDS	1856445	1857614	.	+	0	ID=GCA000560365_01779;Name=Acetoin utilization protein AcuC;locus_tag=GCA000560365_01779;product=Acetoin utilization protein AcuC;Dbxref=GO:0004407,GO:0040029,GO:0045150;gene=acuC;Parent=GCA000560365_01779_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0123,COG:Q,RefSeq:WP_001184005.1,SO:0001217,UniParc:UPI00004B5C36,UniRef:UniRef100_Q5HF39,UniRef:UniRef50_P64375,UniRef:UniRef90_P64375
contig_1	Pyrodigal	gene	1857712	1858701	.	-	.	ID=GCA000560365_01780_gene;locus_tag=GCA000560365_01780;gene=ccpA
contig_1	Pyrodigal	CDS	1857712	1858701	.	-	0	ID=GCA000560365_01780;Name=catabolite control protein A;locus_tag=GCA000560365_01780;product=catabolite control protein A;Dbxref=GO:0000976,GO:0001228,GO:0003677,GO:0003700,GO:0005975,GO:0006355;gene=ccpA;Parent=GCA000560365_01780_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1609,COG:K,RefSeq:WP_000219066.1,SO:0001217,UniParc:UPI000005438C,UniRef:UniRef100_Q5HF38,UniRef:UniRef50_Q5HNH3,UniRef:UniRef90_Q5HF38
contig_1	Pyrodigal	gene	1859241	1860332	.	-	.	ID=GCA000560365_01781_gene;locus_tag=GCA000560365_01781;gene=aroGA
contig_1	Pyrodigal	CDS	1859241	1860332	.	-	0	ID=GCA000560365_01781;Name=bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase;locus_tag=GCA000560365_01781;product=bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase;Dbxref=GO:0003824,GO:0009073,GO:0046417;gene=aroGA;Parent=GCA000560365_01781_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2876,COG:E,KEGG:K13853,RefSeq:WP_000066378.1,SO:0001217,UniParc:UPI000005438A,UniRef:UniRef100_Q2G248,UniRef:UniRef50_P39912,UniRef:UniRef90_A0A7U7JV80;ec_number=5.4.99.5
contig_1	Pyrodigal	gene	1861032	1862390	.	-	.	ID=GCA000560365_01782_gene;locus_tag=GCA000560365_01782
contig_1	Pyrodigal	CDS	1861032	1862390	.	-	0	ID=GCA000560365_01782;Name=Smooth muscle caldesmon;locus_tag=GCA000560365_01782;product=Smooth muscle caldesmon;Parent=GCA000560365_01782_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000193917.1,SO:0001217,UniParc:UPI00015FD6FB,UniRef:UniRef100_A0A0E8GPH7,UniRef:UniRef50_A0A0H2XJG9,UniRef:UniRef90_A0A0E8GPH7
contig_1	Pyrodigal	gene	1862464	1862955	.	-	.	ID=GCA000560365_01783_gene;locus_tag=GCA000560365_01783
contig_1	Pyrodigal	CDS	1862464	1862955	.	-	0	ID=GCA000560365_01783;Name=UPF0478 protein MW1682;locus_tag=GCA000560365_01783;product=UPF0478 protein MW1682;Dbxref=GO:0005886;Parent=GCA000560365_01783_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4768,COG:S,RefSeq:WP_000383814.1,SO:0001217,UniParc:UPI0000054388,UniRef:UniRef100_Q2G247,UniRef:UniRef50_Q49YH0,UniRef:UniRef90_Q2G247
contig_1	Pyrodigal	gene	1863029	1864342	.	-	.	ID=GCA000560365_01784_gene;locus_tag=GCA000560365_01784;gene=murC
contig_1	Pyrodigal	CDS	1863029	1864342	.	-	0	ID=GCA000560365_01784;Name=UDP-N-acetylmuramate--L-alanine ligase;locus_tag=GCA000560365_01784;product=UDP-N-acetylmuramate--L-alanine ligase;Dbxref=GO:0005524,GO:0005737,GO:0008360,GO:0008763,GO:0009252,GO:0051301,GO:0071555;gene=murC;Parent=GCA000560365_01784_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0773,COG:M,KEGG:K01924,RefSeq:WP_000150168.1,SO:0001217,UniParc:UPI00003D7D59,UniRef:UniRef100_Q2FXJ0,UniRef:UniRef50_Q2FXJ0,UniRef:UniRef90_Q2FXJ0;ec_number=6.3.2.8
contig_1	Pyrodigal	gene	1864366	1868190	.	-	.	ID=GCA000560365_01785_gene;locus_tag=GCA000560365_01785;gene=ftsK
contig_1	Pyrodigal	CDS	1864366	1868190	.	-	0	ID=GCA000560365_01785;Name=FtsK domain-containing protein;locus_tag=GCA000560365_01785;product=FtsK domain-containing protein;gene=ftsK;Parent=GCA000560365_01785_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1674,COG:D,RefSeq:WP_000118287.1,SO:0001217,UniParc:UPI0000696C68,UniRef:UniRef100_A0A1S5ZD33,UniRef:UniRef50_A0A151A4B2,UniRef:UniRef90_Q2FXI9
contig_1	Pyrodigal	gene	1868211	1868807	.	-	.	ID=GCA000560365_01786_gene;locus_tag=GCA000560365_01786;gene=ytpR
contig_1	Pyrodigal	CDS	1868211	1868807	.	-	0	ID=GCA000560365_01786;Name=YtpR family tRNA-binding protein;locus_tag=GCA000560365_01786;product=YtpR family tRNA-binding protein;gene=ytpR;Parent=GCA000560365_01786_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0073,COG:J,RefSeq:WP_001048368.1,SO:0001217,UniParc:UPI0000054386,UniRef:UniRef100_Q2FXI8,UniRef:UniRef50_O34943,UniRef:UniRef90_A0A2S6DGF7
contig_1	Pyrodigal	gene	1868836	1869693	.	-	.	ID=GCA000560365_01787_gene;locus_tag=GCA000560365_01787;gene=ytpQ
contig_1	Pyrodigal	CDS	1868836	1869693	.	-	0	ID=GCA000560365_01787;Name=UPF0354 protein SA1564;locus_tag=GCA000560365_01787;product=UPF0354 protein SA1564;gene=ytpQ;Parent=GCA000560365_01787_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4848,COG:R,RefSeq:WP_001091387.1,SO:0001217,UniParc:UPI00000CAE0C,UniRef:UniRef100_Q2FXI7,UniRef:UniRef50_Q2FXI7,UniRef:UniRef90_Q2FXI7
contig_1	Pyrodigal	gene	1869793	1870104	.	-	.	ID=GCA000560365_01788_gene;locus_tag=GCA000560365_01788;gene=cnoX
contig_1	Pyrodigal	CDS	1869793	1870104	.	-	0	ID=GCA000560365_01788;Name=Thioredoxin domain-containing protein;locus_tag=GCA000560365_01788;product=Thioredoxin domain-containing protein;gene=cnoX;Parent=GCA000560365_01788_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3118,COG:O,RefSeq:WP_000811163.1,SO:0001217,UniParc:UPI0000054384,UniRef:UniRef100_Q2FXI6,UniRef:UniRef50_A0A380G846,UniRef:UniRef90_Q2FXI6
contig_1	Pyrodigal	gene	1870169	1871245	.	-	.	ID=GCA000560365_01789_gene;locus_tag=GCA000560365_01789;gene=frvX
contig_1	Pyrodigal	CDS	1870169	1871245	.	-	0	ID=GCA000560365_01789;Name=Glutamyl aminopeptidase Deblocking aminopeptidase;locus_tag=GCA000560365_01789;product=Glutamyl aminopeptidase Deblocking aminopeptidase;gene=frvX;Parent=GCA000560365_01789_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1363,COG:EG,RefSeq:WP_001024576.1,SO:0001217,UniParc:UPI00000CA9CB,UniRef:UniRef100_Q2FXI5,UniRef:UniRef50_A0A0D1GA35,UniRef:UniRef90_A0A0D1GA35
contig_1	Pyrodigal	gene	1871329	1871643	.	+	.	ID=GCA000560365_01790_gene;locus_tag=GCA000560365_01790
contig_1	Pyrodigal	CDS	1871329	1871643	.	+	0	ID=GCA000560365_01790;Name=PepSY domain-containing protein;locus_tag=GCA000560365_01790;product=PepSY domain-containing protein;Parent=GCA000560365_01790_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5584,COG:S,SO:0001217,UniParc:UPI00006E3DDC,UniRef:UniRef100_Q2FXI4,UniRef:UniRef50_Q2FXI4,UniRef:UniRef90_Q2FXI4
contig_1	Pyrodigal	gene	1871768	1872610	.	-	.	ID=GCA000560365_01791_gene;locus_tag=GCA000560365_01791;gene=gloB
contig_1	Pyrodigal	CDS	1871768	1872610	.	-	0	ID=GCA000560365_01791;Name=Metal-dependent hydrolase;locus_tag=GCA000560365_01791;product=Metal-dependent hydrolase;gene=gloB;Parent=GCA000560365_01791_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0491,COG:R,RefSeq:WP_000689580.1,SO:0001217,UniParc:UPI0000696C69,UniRef:UniRef100_Q2FXI3,UniRef:UniRef50_A0A077US04,UniRef:UniRef90_A0A077US04
contig_1	Infernal	gene	1872877	1872935	.	+	.	ID=GCA000560365_01792_gene;locus_tag=GCA000560365_01792;gene=sau-5949
contig_1	Infernal	ncRNA	1872877	1872935	2.7e-13	+	.	ID=GCA000560365_01792;Name=Staphylococcus sRNA sau-5949;locus_tag=GCA000560365_01792;product=Staphylococcus sRNA sau-5949;Dbxref=RFAM:RF02396;Parent=GCA000560365_01792_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02396
contig_1	Pyrodigal	gene	1873080	1873724	.	-	.	ID=GCA000560365_01793_gene;locus_tag=GCA000560365_01793;gene=trmB
contig_1	Pyrodigal	CDS	1873080	1873724	.	-	0	ID=GCA000560365_01793;Name=tRNA (guanosine(46)-N7)-methyltransferase TrmB;locus_tag=GCA000560365_01793;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;Dbxref=GO:0006400,GO:0008176,GO:0043527;gene=trmB;Parent=GCA000560365_01793_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0220,COG:J,RefSeq:WP_001266157.1,SO:0001217,UniParc:UPI000005437E,UniRef:UniRef100_Q2FXI2,UniRef:UniRef50_Q2FXI2,UniRef:UniRef90_Q2FXI2;ec_number=2.1.1.33
contig_1	Pyrodigal	gene	1873739	1874530	.	-	.	ID=GCA000560365_01794_gene;locus_tag=GCA000560365_01794;gene=cotS
contig_1	Pyrodigal	CDS	1873739	1874530	.	-	0	ID=GCA000560365_01794;Name=Aminoglycoside phosphotransferase domain-containing protein;locus_tag=GCA000560365_01794;product=Aminoglycoside phosphotransferase domain-containing protein;gene=cotS;Parent=GCA000560365_01794_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0510,COG:H,RefSeq:WP_000434765.1,SO:0001217,UniParc:UPI00000CAA0E,UniRef:UniRef100_A0A7Z7R097,UniRef:UniRef50_I3ECD2,UniRef:UniRef90_Q2FXI1
contig_1	Pyrodigal	gene	1875080	1875928	.	-	.	ID=GCA000560365_01795_gene;locus_tag=GCA000560365_01795;gene=dat
contig_1	Pyrodigal	CDS	1875080	1875928	.	-	0	ID=GCA000560365_01795;Name=D-amino-acid transaminase;locus_tag=GCA000560365_01795;product=D-amino-acid transaminase;Dbxref=GO:0005829,GO:0019478,GO:0019480,GO:0030170,GO:0046416,GO:0046437,GO:0047810;gene=dat;Parent=GCA000560365_01795_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0115,COG:EH,KEGG:K00824,RefSeq:WP_000411085.1,SO:0001217,UniParc:UPI000005437C,UniRef:UniRef100_Q5HF24,UniRef:UniRef50_Q5HNG0,UniRef:UniRef90_P63511;ec_number=2.6.1.21
contig_1	Pyrodigal	gene	1875932	1877341	.	-	.	ID=GCA000560365_01796_gene;locus_tag=GCA000560365_01796;gene=sapep
contig_1	Pyrodigal	CDS	1875932	1877341	.	-	0	ID=GCA000560365_01796;Name=Mn(2+)-dependent dipeptidase Sapep;locus_tag=GCA000560365_01796;product=Mn(2+)-dependent dipeptidase Sapep;Dbxref=GO:0006508,GO:0006526,GO:0008237,GO:0008270,GO:0008777,GO:0016805;gene=sapep;Parent=GCA000560365_01796_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000265417,COG:COG0624,COG:E,RefSeq:WP_000265417.1,SO:0001217,UniParc:UPI000005437B,UniRef:UniRef100_Q2FXH9,UniRef:UniRef50_Q2FXH9,UniRef:UniRef90_Q2FXH9;ec_number=3.4.13.-
contig_1	Pyrodigal	gene	1878091	1878513	.	-	.	ID=GCA000560365_01797_gene;locus_tag=GCA000560365_01797;gene=ytxH
contig_1	Pyrodigal	CDS	1878091	1878513	.	-	0	ID=GCA000560365_01797;Name=YtxH domain-containing protein;locus_tag=GCA000560365_01797;product=YtxH domain-containing protein;gene=ytxH;Parent=GCA000560365_01797_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001051860.1,SO:0001217,UniParc:UPI000005437A,UniRef:UniRef100_Q2FXH8,UniRef:UniRef50_A0A1J3ZYN5,UniRef:UniRef90_Q2FXH8
contig_1	Pyrodigal	gene	1878530	1879225	.	-	.	ID=GCA000560365_01798_gene;locus_tag=GCA000560365_01798;gene=rsuA
contig_1	Pyrodigal	CDS	1878530	1879225	.	-	0	ID=GCA000560365_01798;Name=Pseudouridine synthase;locus_tag=GCA000560365_01798;product=Pseudouridine synthase;gene=rsuA;Parent=GCA000560365_01798_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1187,COG:J,RefSeq:WP_001217125.1,SO:0001217,UniParc:UPI0000054379,UniRef:UniRef100_Q2FXH7,UniRef:UniRef50_A0A2S6D0E1,UniRef:UniRef90_A0A2S6D0E1
contig_1	Pyrodigal	gene	1879222	1880883	.	-	.	ID=GCA000560365_01799_gene;locus_tag=GCA000560365_01799;gene=spoVB
contig_1	Pyrodigal	CDS	1879222	1880883	.	-	0	ID=GCA000560365_01799;Name=Polysaccharide biosynthesis protein;locus_tag=GCA000560365_01799;product=Polysaccharide biosynthesis protein;gene=spoVB;Parent=GCA000560365_01799_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5841,COG:D,RefSeq:WP_000004335.1,SO:0001217,UniParc:UPI0000054377,UniRef:UniRef100_Q2FXH6,UniRef:UniRef50_B9E7H2,UniRef:UniRef90_A0A2K4AFH1
contig_1	Pyrodigal	gene	1881290	1882558	.	+	.	ID=GCA000560365_01800_gene;locus_tag=GCA000560365_01800;gene=yhiN
contig_1	Pyrodigal	CDS	1881290	1882558	.	+	0	ID=GCA000560365_01800;Name=Aminoacetone oxidase family FAD-binding enzyme;locus_tag=GCA000560365_01800;product=Aminoacetone oxidase family FAD-binding enzyme;gene=yhiN;Parent=GCA000560365_01800_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2081,COG:R,RefSeq:WP_000285014.1,SO:0001217,UniParc:UPI0000696C6A,UniRef:UniRef100_A0A5A8VFU7,UniRef:UniRef50_A0A0U1MPZ9,UniRef:UniRef90_A0A0U1MPZ9
contig_1	Pyrodigal	gene	1882675	1889235	.	-	.	ID=GCA000560365_01801_gene;locus_tag=GCA000560365_01801;gene=sasC
contig_1	Pyrodigal	CDS	1882675	1889235	.	-	0	ID=GCA000560365_01801;Name=LPXTG-anchored repetitive surface protein SasC;locus_tag=GCA000560365_01801;product=LPXTG-anchored repetitive surface protein SasC;gene=sasC;Parent=GCA000560365_01801_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001050546,COG:COG1196,COG:D,RefSeq:WP_001050548.1,SO:0001217,UniParc:UPI0000696C6B,UniRef:UniRef100_A0A2C9TN08,UniRef:UniRef50_C7BUR8,UniRef:UniRef90_C7BUR8
contig_1	Pyrodigal	gene	1889561	1889872	.	-	.	ID=GCA000560365_01802_gene;locus_tag=GCA000560365_01802;gene=pspE
contig_1	Pyrodigal	CDS	1889561	1889872	.	-	0	ID=GCA000560365_01802;Name=Rhodanese domain-containing protein;locus_tag=GCA000560365_01802;product=Rhodanese domain-containing protein;gene=pspE;Parent=GCA000560365_01802_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0607,COG:P,RefSeq:WP_000836465.1,SO:0001217,UniParc:UPI0000054374,UniRef:UniRef100_Q2FXH3,UniRef:UniRef50_A0A654B5B2,UniRef:UniRef90_Q2FXH3
contig_1	Pyrodigal	gene	1889894	1892311	.	-	.	ID=GCA000560365_01803_gene;locus_tag=GCA000560365_01803;gene=leuS
contig_1	Pyrodigal	CDS	1889894	1892311	.	-	0	ID=GCA000560365_01803;Name=leucine--tRNA ligase;locus_tag=GCA000560365_01803;product=leucine--tRNA ligase;Dbxref=GO:0000166,GO:0002161,GO:0004823,GO:0005524,GO:0005829,GO:0006429;gene=leuS;Parent=GCA000560365_01803_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0495,COG:J,KEGG:K01869,RefSeq:WP_001549041.1,SO:0001217,UniParc:UPI00004B5C38,UniRef:UniRef100_Q2FXH2,UniRef:UniRef50_A8FGG0,UniRef:UniRef90_Q2FXH2;ec_number=6.1.1.4
contig_1	Pyrodigal	gene	1892599	1893780	.	-	.	ID=GCA000560365_01804_gene;locus_tag=GCA000560365_01804;gene=araJ
contig_1	Pyrodigal	CDS	1892599	1893780	.	-	0	ID=GCA000560365_01804;Name=Major facilitator superfamily (MFS) profile domain-containing protein;locus_tag=GCA000560365_01804;product=Major facilitator superfamily (MFS) profile domain-containing protein;gene=araJ;Parent=GCA000560365_01804_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2814,COG:G,RefSeq:WP_001025061.1,SO:0001217,UniParc:UPI0000054372,UniRef:UniRef100_Q2FXH1,UniRef:UniRef50_Q2FXH1,UniRef:UniRef90_Q2FXH1
contig_1	Pyrodigal	gene	1893890	1894843	.	+	.	ID=GCA000560365_01805_gene;locus_tag=GCA000560365_01805;gene=yhcC
contig_1	Pyrodigal	CDS	1893890	1894843	.	+	0	ID=GCA000560365_01805;Name=TIGR01212 family radical SAM protein;locus_tag=GCA000560365_01805;product=TIGR01212 family radical SAM protein;Dbxref=GO:0051536,GO:1904047;gene=yhcC;Parent=GCA000560365_01805_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1242,COG:R,KEGG:K07139,RefSeq:WP_000526539.1,SO:0001217,UniParc:UPI0000054371,UniRef:UniRef100_Q2FXH0,UniRef:UniRef50_U1LL80,UniRef:UniRef90_Q2FXH0
contig_1	Pyrodigal	gene	1894840	1895403	.	+	.	ID=GCA000560365_01806_gene;locus_tag=GCA000560365_01806;gene=mnmM
contig_1	Pyrodigal	CDS	1894840	1895403	.	+	0	ID=GCA000560365_01806;Name=tRNA (mnm(5)s(2)U34)-methyltransferase;locus_tag=GCA000560365_01806;product=tRNA (mnm(5)s(2)U34)-methyltransferase;Dbxref=GO:0008033,GO:0008168,GO:0032259;gene=mnmM;Parent=GCA000560365_01806_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0275,COG:J,RefSeq:WP_000764419.1,SO:0001217,UniParc:UPI0000054370,UniRef:UniRef100_Q2FXG9,UniRef:UniRef50_Q2FXG9,UniRef:UniRef90_Q2FXG9;ec_number=2.1.1.61
contig_1	Pyrodigal	gene	1895523	1895924	.	-	.	ID=GCA000560365_01807_gene;locus_tag=GCA000560365_01807;gene=rot
contig_1	Pyrodigal	CDS	1895523	1895924	.	-	0	ID=GCA000560365_01807;Name=HTH-type transcriptional regulator rot;locus_tag=GCA000560365_01807;product=HTH-type transcriptional regulator rot;Dbxref=GO:0003677,GO:0003700,GO:0006950;gene=rot;Parent=GCA000560365_01807_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1846,COG:K,KEGG:K20338,RefSeq:WP_000757543.1,SO:0001217,UniParc:UPI000069AAE8,UniRef:UniRef100_Q9RFJ6,UniRef:UniRef50_Q9RFJ6,UniRef:UniRef90_Q9RFJ6
contig_1	Pyrodigal	gene	1896444	1896668	.	-	.	ID=GCA000560365_01808_gene;locus_tag=GCA000560365_01808
contig_1	Pyrodigal	CDS	1896444	1896668	.	-	0	ID=GCA000560365_01808;Name=Transposase;locus_tag=GCA000560365_01808;product=Transposase;Parent=GCA000560365_01808_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000069AAE9,UniRef:UniRef100_Q2FXG7,UniRef:UniRef50_Q2FXG7,UniRef:UniRef90_Q2FXG7
contig_1	Pyrodigal	gene	1896665	1897156	.	-	.	ID=GCA000560365_01809_gene;locus_tag=GCA000560365_01809;gene=insH
contig_1	Pyrodigal	CDS	1896665	1897156	.	-	0	ID=GCA000560365_01809;Name=Transposase InsH N-terminal domain-containing protein;locus_tag=GCA000560365_01809;product=Transposase InsH N-terminal domain-containing protein;gene=insH;Parent=GCA000560365_01809_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000005436C,UniRef:UniRef100_Q2FXG6,UniRef:UniRef50_Q2FXG6,UniRef:UniRef90_Q2FXG6
contig_1	Infernal	gene	1897193	1897430	.	+	.	ID=GCA000560365_01810_gene;locus_tag=GCA000560365_01810;gene=tsr24
contig_1	Infernal	ncRNA	1897193	1897430	2.7e-39	+	.	ID=GCA000560365_01810;Name=S. aureus tsr24 small RNA;locus_tag=GCA000560365_01810;product=S. aureus tsr24 small RNA;Dbxref=RFAM:RF02577;Parent=GCA000560365_01810_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02577
contig_1	Pyrodigal	gene	1897503	1898330	.	-	.	ID=GCA000560365_01811_gene;locus_tag=GCA000560365_01811;gene=pldB
contig_1	Pyrodigal	CDS	1897503	1898330	.	-	0	ID=GCA000560365_01811;Name=Serine aminopeptidase S33 domain-containing protein;locus_tag=GCA000560365_01811;product=Serine aminopeptidase S33 domain-containing protein;gene=pldB;Parent=GCA000560365_01811_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2267,COG:I,RefSeq:WP_000266096.1,SO:0001217,UniParc:UPI000005436B,UniRef:UniRef100_Q2FXG5,UniRef:UniRef50_Q2FXG5,UniRef:UniRef90_Q2FXG5
contig_1	Pyrodigal	gene	1898564	1899565	.	+	.	ID=GCA000560365_01812_gene;locus_tag=GCA000560365_01812;gene=putA
contig_1	Pyrodigal	CDS	1898564	1899565	.	+	0	ID=GCA000560365_01812;Name=proline dehydrogenase;locus_tag=GCA000560365_01812;product=proline dehydrogenase;gene=putA;Parent=GCA000560365_01812_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0506,COG:E,RefSeq:WP_001196354.1,SO:0001217,UniParc:UPI000005436A,UniRef:UniRef100_Q2FXG3,UniRef:UniRef50_A0A390ZXL9,UniRef:UniRef90_A0A390ZXL9
contig_1	Pyrodigal	gene	1899687	1900151	.	-	.	ID=GCA000560365_01813_gene;locus_tag=GCA000560365_01813;gene=ribE
contig_1	Pyrodigal	CDS	1899687	1900151	.	-	0	ID=GCA000560365_01813;Name=6%2C7-dimethyl-8-ribityllumazine synthase;locus_tag=GCA000560365_01813;product=6%2C7-dimethyl-8-ribityllumazine synthase;Dbxref=GO:0000906,GO:0005829,GO:0009231,GO:0009349;gene=ribE;Parent=GCA000560365_01813_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0054,COG:H,KEGG:K00794,RefSeq:WP_001008551.1,SO:0001217,UniParc:UPI0000054369,UniRef:UniRef100_Q2FXG2,UniRef:UniRef50_O66529,UniRef:UniRef90_Q2FXG2;ec_number=2.5.1.78
contig_1	Pyrodigal	gene	1900164	1901345	.	-	.	ID=GCA000560365_01814_gene;locus_tag=GCA000560365_01814;gene=ribBA
contig_1	Pyrodigal	CDS	1900164	1901345	.	-	0	ID=GCA000560365_01814;Name=Riboflavin biosynthesis protein RibBA;locus_tag=GCA000560365_01814;product=Riboflavin biosynthesis protein RibBA;Dbxref=GO:0000287,GO:0003935,GO:0005525,GO:0005829,GO:0008270,GO:0008686,GO:0009231,GO:0030145;gene=ribBA;Parent=GCA000560365_01814_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0807,COG:H,KEGG:K14652,RefSeq:WP_001159022.1,SO:0001217,UniParc:UPI00000522A4,UniRef:UniRef100_Q5HF07,UniRef:UniRef50_Q4L7B1,UniRef:UniRef90_Q99TA0;ec_number=4.1.99.12
contig_1	Pyrodigal	gene	1901356	1901988	.	-	.	ID=GCA000560365_01815_gene;locus_tag=GCA000560365_01815;gene=ribC
contig_1	Pyrodigal	CDS	1901356	1901988	.	-	0	ID=GCA000560365_01815;Name=riboflavin synthase;locus_tag=GCA000560365_01815;product=riboflavin synthase;gene=ribC;Parent=GCA000560365_01815_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0307,COG:H,KEGG:K00793,RefSeq:WP_000493892.1,SO:0001217,UniParc:UPI0000054367,UniRef:UniRef100_Q2FXG0,UniRef:UniRef50_B9DN31,UniRef:UniRef90_A0A0U1MNE7;ec_number=2.5.1.9
contig_1	Pyrodigal	gene	1901995	1903026	.	-	.	ID=GCA000560365_01816_gene;locus_tag=GCA000560365_01816;gene=ribD
contig_1	Pyrodigal	CDS	1901995	1903026	.	-	0	ID=GCA000560365_01816;Name=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;locus_tag=GCA000560365_01816;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;Dbxref=GO:0008703,GO:0008835;gene=ribD;Parent=GCA000560365_01816_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1985,COG:H,KEGG:K11752,SO:0001217,UniParc:UPI0000054366,UniRef:UniRef100_A0A2G4VG13,UniRef:UniRef50_A0A2G4VG13,UniRef:UniRef90_A0A2G4VG13;ec_number=3.5.4.26
contig_1	Infernal	regulatory_region	1903165	1903300	1.4e-20	-	.	ID=KMHODOBJJH_167;Name=FMN riboswitch aptamer (RFN element);product=FMN riboswitch aptamer (RFN element);Dbxref=RFAM:RF00050;inference=profile:Rfam:RF00050;Note=SO:0000035;regulatory_class=riboswitch
contig_1	Pyrodigal	gene	1903519	1905021	.	-	.	ID=GCA000560365_01817_gene;locus_tag=GCA000560365_01817;gene=ydhS
contig_1	Pyrodigal	CDS	1903519	1905021	.	-	0	ID=GCA000560365_01817;Name=FAD-dependent urate hydroxylase HpyO/Asp monooxygenase CreE-like FAD/NAD(P)-binding domain-containing protein;locus_tag=GCA000560365_01817;product=FAD-dependent urate hydroxylase HpyO/Asp monooxygenase CreE-like FAD/NAD(P)-binding domain-containing protein;gene=ydhS;Parent=GCA000560365_01817_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4529,COG:R,RefSeq:WP_001261677.1,SO:0001217,UniParc:UPI00004B5C3B,UniRef:UniRef100_A0A0E7MG06,UniRef:UniRef50_S2XMM3,UniRef:UniRef90_Q2FXF8
contig_1	Pyrodigal	gene	1905544	1905858	.	+	.	ID=GCA000560365_01818_gene;locus_tag=GCA000560365_01818
contig_1	Pyrodigal	CDS	1905544	1905858	.	+	0	ID=GCA000560365_01818;Name=Arsenate operon regulator;locus_tag=GCA000560365_01818;product=Arsenate operon regulator;Parent=GCA000560365_01818_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000221179.1,SO:0001217,UniParc:UPI00000BF2AB,UniRef:UniRef100_Q2FXF7,UniRef:UniRef50_P30338,UniRef:UniRef90_Q2FXF7
contig_1	Pyrodigal	gene	1905858	1907150	.	+	.	ID=GCA000560365_01819_gene;locus_tag=GCA000560365_01819;gene=arsB
contig_1	Pyrodigal	CDS	1905858	1907150	.	+	0	ID=GCA000560365_01819;Name=arsenite efflux transporter membrane subunit ArsB;locus_tag=GCA000560365_01819;product=arsenite efflux transporter membrane subunit ArsB;Dbxref=GO:0005886,GO:0015105,GO:0015700,GO:0016020,GO:0046685;gene=arsB;Parent=GCA000560365_01819_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1055,COG:P,KEGG:K03893,NCBIFam:NF033877.0,RefSeq:WP_000989121.1,SO:0001217,UniParc:UPI00000CAAD7,UniRef:UniRef100_Q5HF02,UniRef:UniRef50_Q5HF02,UniRef:UniRef90_Q5HF02
contig_1	Pyrodigal	gene	1907168	1907563	.	+	.	ID=GCA000560365_01820_gene;locus_tag=GCA000560365_01820;gene=arsC
contig_1	Pyrodigal	CDS	1907168	1907563	.	+	0	ID=GCA000560365_01820;Name=arsenate reductase (thioredoxin);locus_tag=GCA000560365_01820;product=arsenate reductase (thioredoxin);Dbxref=GO:0004725,GO:0005737,GO:0030612,GO:0046685;gene=arsC;Parent=GCA000560365_01820_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03741,RefSeq:WP_000163235.1,SO:0001217,UniParc:UPI0000054361,UniRef:UniRef100_Q2FXF5,UniRef:UniRef50_Q2FXF5,UniRef:UniRef90_Q2FXF5;ec_number=1.20.4.4
contig_1	Pyrodigal	gene	1907858	1908712	.	-	.	ID=GCA000560365_01821_gene;locus_tag=GCA000560365_01821;gene=lytD
contig_1	Pyrodigal	CDS	1907858	1908712	.	-	0	ID=GCA000560365_01821;Name=Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain-containing protein;locus_tag=GCA000560365_01821;product=Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain-containing protein;gene=lytD;Parent=GCA000560365_01821_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4193,COG:G,RefSeq:WP_001032833.1,SO:0001217,UniParc:UPI00000BF2A9,UniRef:UniRef100_Q2FXF4,UniRef:UniRef50_Q2FXF4,UniRef:UniRef90_Q2FXF4
contig_1	Pyrodigal	gene	1908988	1909212	.	-	.	ID=GCA000560365_01822_gene;locus_tag=GCA000560365_01822
contig_1	Pyrodigal	CDS	1908988	1909212	.	-	0	ID=GCA000560365_01822;Name=Staphylococcal protein;locus_tag=GCA000560365_01822;product=Staphylococcal protein;Parent=GCA000560365_01822_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000384171.1,SO:0001217,UniParc:UPI000005435F,UniRef:UniRef100_Q2FXF3,UniRef:UniRef50_Q2FXF3,UniRef:UniRef90_Q2FXF3
contig_1	Pyrodigal	gene	1909411	1909881	.	+	.	ID=GCA000560365_01823_gene;locus_tag=GCA000560365_01823;gene=sigS
contig_1	Pyrodigal	CDS	1909411	1909881	.	+	0	ID=GCA000560365_01823;Name=RNA polymerase sigma factor SigS;locus_tag=GCA000560365_01823;product=RNA polymerase sigma factor SigS;Dbxref=GO:0003677,GO:0006352,GO:0016987;gene=sigS;Parent=GCA000560365_01823_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000671063,COG:COG1595,COG:K,RefSeq:WP_000671052.1,SO:0001217,UniParc:UPI00000D9EA7,UniRef:UniRef100_Q2FFW3,UniRef:UniRef50_Q2FXF2,UniRef:UniRef90_Q2FXF2
contig_1	Pyrodigal	gene	1909994	1910437	.	+	.	ID=GCA000560365_01824_gene;locus_tag=GCA000560365_01824;gene=comK
contig_1	Pyrodigal	CDS	1909994	1910437	.	+	0	ID=GCA000560365_01824;Name=Competence protein ComK;locus_tag=GCA000560365_01824;product=Competence protein ComK;gene=comK;Parent=GCA000560365_01824_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001153742.1,SO:0001217,UniParc:UPI00000D78AD,UniRef:UniRef100_Q2FXF1,UniRef:UniRef50_Q2FXF1,UniRef:UniRef90_Q2FXF1
contig_1	Pyrodigal	gene	1910424	1910867	.	-	.	ID=GCA000560365_01825_gene;locus_tag=GCA000560365_01825
contig_1	Pyrodigal	CDS	1910424	1910867	.	-	0	ID=GCA000560365_01825;Name=Staphylococcal protein;locus_tag=GCA000560365_01825;product=Staphylococcal protein;Parent=GCA000560365_01825_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001030465.1,SO:0001217,UniParc:UPI000005435C,UniRef:UniRef100_Q2FXF0,UniRef:UniRef50_Q2FXF0,UniRef:UniRef90_Q2FXF0
contig_1	Pyrodigal	gene	1911163	1911798	.	+	.	ID=GCA000560365_01826_gene;locus_tag=GCA000560365_01826;gene=sdpA
contig_1	Pyrodigal	CDS	1911163	1911798	.	+	0	ID=GCA000560365_01826;Name=CPBP family intramembrane metalloprotease SdpA;locus_tag=GCA000560365_01826;product=CPBP family intramembrane metalloprotease SdpA;gene=sdpA;Parent=GCA000560365_01826_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001168904,COG:COG1266,COG:O,RefSeq:WP_001168904.1,SO:0001217,UniParc:UPI000005435B,UniRef:UniRef100_Q2FXE9,UniRef:UniRef50_Q2FXE9,UniRef:UniRef90_Q2FXE9
contig_1	Pyrodigal	gene	1912238	1912951	.	-	.	ID=GCA000560365_01827_gene;locus_tag=GCA000560365_01827;gene=talA
contig_1	Pyrodigal	CDS	1912238	1912951	.	-	0	ID=GCA000560365_01827;Name=transaldolase;locus_tag=GCA000560365_01827;product=transaldolase;Dbxref=GO:0004801,GO:0006098;gene=talA;Parent=GCA000560365_01827_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0176,COG:G,RefSeq:WP_001096459.1,SO:0001217,UniParc:UPI0000696C70,UniRef:UniRef100_A0A5A8VMD0,UniRef:UniRef50_A0A0D0SMT5,UniRef:UniRef90_A0A0D0SMT5;ec_number=2.2.1.2
contig_1	Pyrodigal	gene	1913211	1913513	.	+	.	ID=GCA000560365_01828_gene;locus_tag=GCA000560365_01828
contig_1	Pyrodigal	CDS	1913211	1913513	.	+	0	ID=GCA000560365_01828;Name=Membrane protein;locus_tag=GCA000560365_01828;product=Membrane protein;Parent=GCA000560365_01828_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000091445.1,SO:0001217,UniParc:UPI0000054357,UniRef:UniRef100_A0AA43V2N0,UniRef:UniRef50_Q5HND2,UniRef:UniRef90_A0A389U3H2
contig_1	Pyrodigal	gene	1913769	1914134	.	+	.	ID=GCA000560365_01829_gene;locus_tag=GCA000560365_01829;gene=crcB
contig_1	Pyrodigal	CDS	1913769	1914134	.	+	0	ID=GCA000560365_01829;Name=fluoride efflux transporter CrcB;locus_tag=GCA000560365_01829;product=fluoride efflux transporter CrcB;Dbxref=GO:0005886,GO:0046872,GO:0062054,GO:0140114;gene=crcB;Parent=GCA000560365_01829_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0239,COG:DP,RefSeq:WP_001200541.1,SO:0001217,UniParc:UPI0001EFF14E,UniRef:UniRef100_A0A1S6D053,UniRef:UniRef50_Q2FXE6,UniRef:UniRef90_Q2FXE6
contig_1	Pyrodigal	gene	1914131	1914484	.	+	.	ID=GCA000560365_01830_gene;locus_tag=GCA000560365_01830;gene=fluC
contig_1	Pyrodigal	CDS	1914131	1914484	.	+	0	ID=GCA000560365_01830;Name=Fluoride-specific ion channel FluC;locus_tag=GCA000560365_01830;product=Fluoride-specific ion channel FluC;Dbxref=GO:0005886,GO:0046872,GO:0062054,GO:0140114;gene=fluC;Parent=GCA000560365_01830_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0239,COG:DP,RefSeq:WP_000623471.1,SO:0001217,UniParc:UPI00005FE5C6,UniRef:UniRef100_Q2FXE5,UniRef:UniRef50_Q2FXE5,UniRef:UniRef90_Q2FXE5
contig_1	Infernal	gene	1914724	1914944	.	-	.	ID=GCA000560365_01831_gene;locus_tag=GCA000560365_01831;gene=tsr24
contig_1	Infernal	ncRNA	1914724	1914944	7e-26	-	.	ID=GCA000560365_01831;Name=S. aureus tsr24 small RNA;locus_tag=GCA000560365_01831;product=S. aureus tsr24 small RNA;Dbxref=RFAM:RF02577;Parent=GCA000560365_01831_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02577
contig_1	Pyrodigal	gene	1915039	1915863	.	+	.	ID=GCA000560365_01832_gene;locus_tag=GCA000560365_01832;gene=tnp
contig_1	Pyrodigal	CDS	1915039	1915863	.	+	0	ID=GCA000560365_01832;Name=IS1182 family transposase;locus_tag=GCA000560365_01832;product=IS1182 family transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000560365_01832_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07487,SO:0001217,UniParc:UPI0000054354,UniRef:UniRef100_Q2FXE4,UniRef:UniRef50_A0A9P2Z0V2,UniRef:UniRef90_Q2FW68
contig_1	Pyrodigal	gene	1915896	1916504	.	+	.	ID=GCA000560365_01833_gene;locus_tag=GCA000560365_01833;gene=tnp
contig_1	Pyrodigal	CDS	1915896	1916504	.	+	0	ID=GCA000560365_01833;Name=IS1182 family transposase;locus_tag=GCA000560365_01833;product=IS1182 family transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000560365_01833_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07487,SO:0001217,UniParc:UPI0001574469,UniRef:UniRef100_A0A2X2KKF7,UniRef:UniRef50_A0A9P2Z0V2,UniRef:UniRef90_Q2FW68
contig_1	Pyrodigal	gene	1916567	1917400	.	-	.	ID=GCA000560365_01834_gene;locus_tag=GCA000560365_01834;gene=aRA1
contig_1	Pyrodigal	CDS	1916567	1917400	.	-	0	ID=GCA000560365_01834;Name=Aldo/keto reductase family protein;locus_tag=GCA000560365_01834;product=Aldo/keto reductase family protein;gene=aRA1;Parent=GCA000560365_01834_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0656,COG:Q,RefSeq:WP_000453320.1,SO:0001217,UniParc:UPI0000054352,UniRef:UniRef100_Q2FXE2,UniRef:UniRef50_B9DN15,UniRef:UniRef90_A0A0H2J452
contig_1	Pyrodigal	gene	1917612	1918520	.	-	.	ID=GCA000560365_01835_gene;locus_tag=GCA000560365_01835
contig_1	Pyrodigal	CDS	1917612	1918520	.	-	0	ID=GCA000560365_01835;Name=NERD domain-containing protein;locus_tag=GCA000560365_01835;product=NERD domain-containing protein;Parent=GCA000560365_01835_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000366154.1,SO:0001217,UniParc:UPI00004B5C3D,UniRef:UniRef100_Q2G1W5,UniRef:UniRef50_Q2G1W5,UniRef:UniRef90_Q2G1W5
contig_1	Pyrodigal	gene	1918645	1919838	.	-	.	ID=GCA000560365_01836_gene;locus_tag=GCA000560365_01836;gene=metK
contig_1	Pyrodigal	CDS	1918645	1919838	.	-	0	ID=GCA000560365_01836;Name=methionine adenosyltransferase;locus_tag=GCA000560365_01836;product=methionine adenosyltransferase;Dbxref=GO:0000287,GO:0004478,GO:0005524,GO:0005737,GO:0006556,GO:0006730;gene=metK;Parent=GCA000560365_01836_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0192,COG:H,KEGG:K00789,RefSeq:WP_000933822.1,SO:0001217,UniParc:UPI0000054350,UniRef:UniRef100_Q2G1W4,UniRef:UniRef50_P72871,UniRef:UniRef90_Q2G1W4;ec_number=2.5.1.6
contig_1	Infernal	regulatory_region	1919944	1920054	1.8e-13	-	.	ID=KMHODOBJJH_180;Name=SAM riboswitch aptamer (S box leader);product=SAM riboswitch aptamer (S box leader);Dbxref=RFAM:RF00162;inference=profile:Rfam:RF00162;Note=SO:0000140;regulatory_class=attenuator
contig_1	Pyrodigal	gene	1920209	1921801	.	+	.	ID=GCA000560365_01837_gene;locus_tag=GCA000560365_01837;gene=pckA
contig_1	Pyrodigal	CDS	1920209	1921801	.	+	0	ID=GCA000560365_01837;Name=phosphoenolpyruvate carboxykinase (ATP);locus_tag=GCA000560365_01837;product=phosphoenolpyruvate carboxykinase (ATP);Dbxref=GO:0004612,GO:0005524,GO:0005829,GO:0006094,GO:0046872;gene=pckA;Parent=GCA000560365_01837_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1866,KEGG:K01610,RefSeq:WP_000109906.1,SO:0001217,UniParc:UPI000013203A,UniRef:UniRef100_Q2G1W2,UniRef:UniRef50_Q2G1W2,UniRef:UniRef90_Q2G1W2;ec_number=4.1.1.49
contig_1	Pyrodigal	gene	1921937	1922299	.	-	.	ID=GCA000560365_01838_gene;locus_tag=GCA000560365_01838;gene=tnpA
contig_1	Pyrodigal	CDS	1921937	1922299	.	-	0	ID=GCA000560365_01838;Name=IS200/IS605 family transposase;locus_tag=GCA000560365_01838;product=IS200/IS605 family transposase;Dbxref=GO:0004803;gene=tnpA;Parent=GCA000560365_01838_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_G1UWV3,UniRef:UniRef90_UPI00378F43D1
contig_1	Pyrodigal	gene	1922797	1923567	.	-	.	ID=GCA000560365_01839_gene;locus_tag=GCA000560365_01839;gene=dAP2
contig_1	Pyrodigal	CDS	1922797	1923567	.	-	0	ID=GCA000560365_01839;Name=Peptidase S9 prolyl oligopeptidase catalytic domain-containing protein;locus_tag=GCA000560365_01839;product=Peptidase S9 prolyl oligopeptidase catalytic domain-containing protein;gene=dAP2;Parent=GCA000560365_01839_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1506,COG:E,SO:0001217,UniParc:UPI00004B5C3E,UniRef:UniRef100_Q2G2V6,UniRef:UniRef50_Q2G2V6,UniRef:UniRef90_Q2G2V6
contig_1	Pyrodigal	gene	1923548	1924027	.	-	.	ID=GCA000560365_01840_gene;locus_tag=GCA000560365_01840;gene=ytkD
contig_1	Pyrodigal	CDS	1923548	1924027	.	-	0	ID=GCA000560365_01840;Name=RNA deprotection pyrophosphohydrolase;locus_tag=GCA000560365_01840;product=RNA deprotection pyrophosphohydrolase;Dbxref=GO:0006139,GO:0017111;gene=ytkD;Parent=GCA000560365_01840_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1051,COG:F,SO:0001217,UniParc:UPI000005434B,UniRef:UniRef100_X5E2B2,UniRef:UniRef50_A0A0D6XNS6,UniRef:UniRef90_Q2G2V5
contig_1	Pyrodigal	gene	1924087	1924344	.	+	.	ID=GCA000560365_01841_gene;locus_tag=GCA000560365_01841;gene=yidD
contig_1	Pyrodigal	CDS	1924087	1924344	.	+	0	ID=GCA000560365_01841;Name=membrane protein insertion efficiency factor YidD;locus_tag=GCA000560365_01841;product=membrane protein insertion efficiency factor YidD;Dbxref=GO:0005886;gene=yidD;Parent=GCA000560365_01841_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0759,COG:M,KEGG:K08998,RefSeq:WP_000718107.1,SO:0001217,UniParc:UPI000013B193,UniRef:UniRef100_Q2G2V4,UniRef:UniRef50_Q2G2V4,UniRef:UniRef90_Q2G2V4
contig_1	Pyrodigal	gene	1924341	1925342	.	-	.	ID=GCA000560365_01842_gene;locus_tag=GCA000560365_01842;gene=menC
contig_1	Pyrodigal	CDS	1924341	1925342	.	-	0	ID=GCA000560365_01842;Name=o-succinylbenzoate synthase;locus_tag=GCA000560365_01842;product=o-succinylbenzoate synthase;Dbxref=GO:0000287,GO:0009234,GO:0016829,GO:0043748;gene=menC;Parent=GCA000560365_01842_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4948,COG:MR,RefSeq:WP_000778523.1,SO:0001217,UniParc:UPI00000AFD5F,UniRef:UniRef100_A0A0H2WWB5,UniRef:UniRef50_A0A0H2WWB5,UniRef:UniRef90_A0A0H2WWB5;ec_number=4.2.1.113
contig_1	Pyrodigal	gene	1925347	1926825	.	-	.	ID=GCA000560365_01843_gene;locus_tag=GCA000560365_01843;gene=menE
contig_1	Pyrodigal	CDS	1925347	1926825	.	-	0	ID=GCA000560365_01843;Name=o-succinylbenzoate--CoA ligase;locus_tag=GCA000560365_01843;product=o-succinylbenzoate--CoA ligase;Dbxref=GO:0005524,GO:0008756,GO:0009234;gene=menE;Parent=GCA000560365_01843_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0318,COG:I,RefSeq:WP_000348360.1,SO:0001217,UniParc:UPI0000054348,UniRef:UniRef100_Q2G2V3,UniRef:UniRef50_Q2G2V3,UniRef:UniRef90_Q2G2V3;ec_number=6.2.1.26
contig_1	Pyrodigal	gene	1926984	1927466	.	-	.	ID=GCA000560365_01844_gene;locus_tag=GCA000560365_01844
contig_1	Pyrodigal	CDS	1926984	1927466	.	-	0	ID=GCA000560365_01844;Name=DUF4909 domain-containing protein;locus_tag=GCA000560365_01844;product=DUF4909 domain-containing protein;Parent=GCA000560365_01844_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00004B5C3F,UniRef:UniRef100_Q2G2Y6,UniRef:UniRef50_Q2G2Y6,UniRef:UniRef90_Q2G2Y6
contig_1	Pyrodigal	gene	1927778	1928392	.	+	.	ID=GCA000560365_01845_gene;locus_tag=GCA000560365_01845
contig_1	Pyrodigal	CDS	1927778	1928392	.	+	0	ID=GCA000560365_01845;Name=Endonuclease;locus_tag=GCA000560365_01845;product=Endonuclease;Parent=GCA000560365_01845_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001091080.1,SO:0001217,UniParc:UPI0001698992,UniRef:UniRef100_A0A0D6HG31,UniRef:UniRef50_A0A380E5B9,UniRef:UniRef90_A0A380E5B9
contig_1	Pyrodigal	gene	1928473	1929468	.	+	.	ID=GCA000560365_01846_gene;locus_tag=GCA000560365_01846
contig_1	Pyrodigal	CDS	1928473	1929468	.	+	0	ID=GCA000560365_01846;Name=DUF4352 domain-containing protein;locus_tag=GCA000560365_01846;product=DUF4352 domain-containing protein;Parent=GCA000560365_01846_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000070653.1,SO:0001217,UniParc:UPI00004B5C40,UniRef:UniRef100_Q2G2Y3,UniRef:UniRef50_Q2G2Y3,UniRef:UniRef90_Q2G2Y3
contig_1	Pyrodigal	gene	1929544	1929699	.	+	.	ID=GCA000560365_01847_gene;locus_tag=GCA000560365_01847
contig_1	Pyrodigal	CDS	1929544	1929699	.	+	0	ID=GCA000560365_01847;Name=Lipoprotein;locus_tag=GCA000560365_01847;product=Lipoprotein;Parent=GCA000560365_01847_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000696C74,UniRef:UniRef100_Q2G2Y5,UniRef:UniRef50_Q2G2Y5,UniRef:UniRef90_Q2G2Y5
contig_1	Pyrodigal	gene	1929700	1930170	.	+	.	ID=GCA000560365_01848_gene;locus_tag=GCA000560365_01848
contig_1	Pyrodigal	CDS	1929700	1930170	.	+	0	ID=GCA000560365_01848;Name=Lipoprotein;locus_tag=GCA000560365_01848;product=Lipoprotein;Parent=GCA000560365_01848_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000696C75,UniRef:UniRef100_Q2G2Y5,UniRef:UniRef50_Q2G2Y5,UniRef:UniRef90_Q2G2Y5
contig_1	Pyrodigal	gene	1930211	1930555	.	+	.	ID=GCA000560365_01849_gene;locus_tag=GCA000560365_01849
contig_1	Pyrodigal	CDS	1930211	1930555	.	+	0	ID=GCA000560365_01849;Name=DUF3969 domain-containing protein;locus_tag=GCA000560365_01849;product=DUF3969 domain-containing protein;Parent=GCA000560365_01849_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000627551.1,SO:0001217,UniParc:UPI0000054342,UniRef:UniRef100_Q2G2Y2,UniRef:UniRef50_Q2G2Y2,UniRef:UniRef90_Q2G2Y2
contig_1	Pyrodigal	gene	1930653	1931204	.	+	.	ID=GCA000560365_01850_gene;locus_tag=GCA000560365_01850
contig_1	Pyrodigal	CDS	1930653	1931204	.	+	0	ID=GCA000560365_01850;Name=Phage protein;locus_tag=GCA000560365_01850;product=Phage protein;Parent=GCA000560365_01850_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000414205.1,SO:0001217,UniParc:UPI00004B5C41,UniRef:UniRef100_Q2FXE1,UniRef:UniRef50_Q2FXE1,UniRef:UniRef90_Q2FXE1
contig_1	Pyrodigal	gene	1931422	1932063	.	-	.	ID=GCA000560365_01851_gene;locus_tag=GCA000560365_01851;gene=irrE
contig_1	Pyrodigal	CDS	1931422	1932063	.	-	0	ID=GCA000560365_01851;Name=IrrE N-terminal-like domain-containing protein;locus_tag=GCA000560365_01851;product=IrrE N-terminal-like domain-containing protein;gene=irrE;Parent=GCA000560365_01851_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000494956.1,SO:0001217,UniParc:UPI0000054340,UniRef:UniRef100_Q2FXE0,UniRef:UniRef50_Q2FXE0,UniRef:UniRef90_Q2FXE0
contig_1	Pyrodigal	gene	1932364	1932540	.	-	.	ID=GCA000560365_01852_gene;locus_tag=GCA000560365_01852
contig_1	Pyrodigal	CDS	1932364	1932540	.	-	0	ID=GCA000560365_01852;Name=Mobilization protein;locus_tag=GCA000560365_01852;product=Mobilization protein;Parent=GCA000560365_01852_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000375476.1,SO:0001217,UniParc:UPI000005433E,UniRef:UniRef100_Q2FXD8,UniRef:UniRef50_A0AAC9RPI6,UniRef:UniRef90_Q2FXD8
contig_1	Pyrodigal	gene	1932551	1932934	.	-	.	ID=GCA000560365_01853_gene;locus_tag=GCA000560365_01853
contig_1	Pyrodigal	CDS	1932551	1932934	.	-	0	ID=GCA000560365_01853;Name=Phage protein;locus_tag=GCA000560365_01853;product=Phage protein;Parent=GCA000560365_01853_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000070811.1,SO:0001217,UniParc:UPI00000D9EB9,UniRef:UniRef100_A0A0E7TEX1,UniRef:UniRef50_A0A077UIW9,UniRef:UniRef90_A0A077UIW9
contig_1	Pyrodigal	gene	1933538	1933681	.	-	.	ID=GCA000560365_01854_gene;locus_tag=GCA000560365_01854
contig_1	Pyrodigal	CDS	1933538	1933681	.	-	0	ID=GCA000560365_01854;Name=Transposase family protein%2C putative;locus_tag=GCA000560365_01854;product=Transposase family protein%2C putative;Parent=GCA000560365_01854_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001549059.1,SO:0001217,UniParc:UPI000005433C,UniRef:UniRef100_Q2FXD5,UniRef:UniRef50_Q2FXD5,UniRef:UniRef90_Q2FXD5
contig_1	Infernal	gene	1933927	1934021	.	-	.	ID=GCA000560365_01855_gene;locus_tag=GCA000560365_01855;gene=fstAT
contig_1	Infernal	ncRNA	1933927	1934021	1.6e-14	-	.	ID=GCA000560365_01855;Name=Fst antitoxin sRNA;locus_tag=GCA000560365_01855;product=Fst antitoxin sRNA;Dbxref=RFAM:RF01797;Parent=GCA000560365_01855_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01797
contig_1	Pyrodigal	gene	1934551	1934928	.	-	.	ID=GCA000560365_01856_gene;locus_tag=GCA000560365_01856
contig_1	Pyrodigal	CDS	1934551	1934928	.	-	0	ID=GCA000560365_01856;Name=DUF1433 domain-containing protein;locus_tag=GCA000560365_01856;product=DUF1433 domain-containing protein;Parent=GCA000560365_01856_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001037045.1,SO:0001217,UniParc:UPI00000D9EBC,UniRef:UniRef100_A0A0D3Q8F3,UniRef:UniRef50_A0A2K4FCP2,UniRef:UniRef90_A0A5S9C6M7
contig_1	Pyrodigal	gene	1935449	1939561	.	-	.	ID=GCA000560365_01857_gene;locus_tag=GCA000560365_01857
contig_1	Pyrodigal	CDS	1935449	1939561	.	-	0	ID=GCA000560365_01857;Name=SMEK domain-containing protein;locus_tag=GCA000560365_01857;product=SMEK domain-containing protein;Parent=GCA000560365_01857_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000831218.1,SO:0001217,UniParc:UPI00000D9EBD,UniRef:UniRef100_Q2FXD2,UniRef:UniRef50_Q2FXD2,UniRef:UniRef90_Q2FXD2
contig_1	Pyrodigal	gene	1940411	1941610	.	-	.	ID=GCA000560365_01858_gene;locus_tag=GCA000560365_01858
contig_1	Pyrodigal	CDS	1940411	1941610	.	-	0	ID=GCA000560365_01858;Name=Restriction endonuclease subunit S;locus_tag=GCA000560365_01858;product=Restriction endonuclease subunit S;Parent=GCA000560365_01858_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01154,RefSeq:WP_000072576.1,SO:0001217,UniParc:UPI00004B5C45,UniRef:UniRef100_A0A2I7Y4B2,UniRef:UniRef50_A0A2I7Y4B2,UniRef:UniRef90_A0A2I7Y4B2;ec_number=3.1.21.3
contig_1	Pyrodigal	gene	1941603	1943159	.	-	.	ID=GCA000560365_01859_gene;locus_tag=GCA000560365_01859
contig_1	Pyrodigal	CDS	1941603	1943159	.	-	0	ID=GCA000560365_01859;Name=type I restriction-modification system subunit M;locus_tag=GCA000560365_01859;product=type I restriction-modification system subunit M;Dbxref=GO:0003677,GO:0009007,GO:0009307;Parent=GCA000560365_01859_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03427,RefSeq:WP_000028659.1,SO:0001217,UniParc:UPI00004B5C46,UniRef:UniRef100_A0A6H4EPT3,UniRef:UniRef50_A0A6H4EPT3,UniRef:UniRef90_A0A6H4EPT3;ec_number=2.1.1.72
contig_1	Pyrodigal	gene	1943522	1944241	.	-	.	ID=GCA000560365_01860_gene;locus_tag=GCA000560365_01860;gene=splF
contig_1	Pyrodigal	CDS	1943522	1944241	.	-	0	ID=GCA000560365_01860;Name=serine protease SplF;locus_tag=GCA000560365_01860;product=serine protease SplF;Dbxref=GO:0005576,GO:0006508,GO:0008236;gene=splF;Parent=GCA000560365_01860_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001038688,COG:COG3591,COG:O,RefSeq:WP_001038688.1,SO:0001217,UniParc:UPI0000046F04,UniRef:UniRef100_Q2FXC8,UniRef:UniRef50_Q2FXC3,UniRef:UniRef90_Q2FXC8;ec_number=3.4.21.-
contig_1	Pyrodigal	gene	1944392	1945108	.	-	.	ID=GCA000560365_01861_gene;locus_tag=GCA000560365_01861;gene=splE
contig_1	Pyrodigal	CDS	1944392	1945108	.	-	0	ID=GCA000560365_01861;Name=serine protease SplE;locus_tag=GCA000560365_01861;product=serine protease SplE;Dbxref=GO:0004252,GO:0005576,GO:0006508;gene=splE;Parent=GCA000560365_01861_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001038759,NCBIProtein:ABD30999.1,RefSeq:WP_001038759.1,SO:0001217,UniParc:UPI0000054336,UniRef:UniRef100_Q2FXC7,UniRef:UniRef50_Q2FXC3,UniRef:UniRef90_Q2FXC7;ec_number=3.4.21.-
contig_1	Pyrodigal	gene	1945266	1945985	.	-	.	ID=GCA000560365_01862_gene;locus_tag=GCA000560365_01862;gene=splD
contig_1	Pyrodigal	CDS	1945266	1945985	.	-	0	ID=GCA000560365_01862;Name=serine protease SplD;locus_tag=GCA000560365_01862;product=serine protease SplD;Dbxref=GO:0005576,GO:0006508,GO:0008236;gene=splD;Parent=GCA000560365_01862_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001038704,COG:COG3591,COG:O,RefSeq:WP_001038704.1,SO:0001217,UniParc:UPI00000CAA66,UniRef:UniRef100_Q2FXC5,UniRef:UniRef50_Q2FXC3,UniRef:UniRef90_Q2FXC8;ec_number=3.4.21.-
contig_1	Pyrodigal	gene	1946106	1946825	.	-	.	ID=GCA000560365_01863_gene;locus_tag=GCA000560365_01863;gene=splC
contig_1	Pyrodigal	CDS	1946106	1946825	.	-	0	ID=GCA000560365_01863;Name=serine protease SplC;locus_tag=GCA000560365_01863;product=serine protease SplC;Dbxref=GO:0004252,GO:0005576,GO:0006508;gene=splC;Parent=GCA000560365_01863_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001038867,COG:COG3591,COG:O,RefSeq:WP_001038867.1,SO:0001217,UniParc:UPI00000B4E0D,UniRef:UniRef100_Q2FXC4,UniRef:UniRef50_Q2FXC3,UniRef:UniRef90_Q2FXC4;ec_number=3.4.21.-
contig_1	Pyrodigal	gene	1946883	1947605	.	-	.	ID=GCA000560365_01864_gene;locus_tag=GCA000560365_01864;gene=splB
contig_1	Pyrodigal	CDS	1946883	1947605	.	-	0	ID=GCA000560365_01864;Name=serine protease SplB;locus_tag=GCA000560365_01864;product=serine protease SplB;Dbxref=GO:0004252,GO:0005576,GO:0006508;gene=splB;Parent=GCA000560365_01864_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001039447,COG:COG3591,COG:O,NCBIProtein:ABD31003.1,RefSeq:WP_001039447.1,SO:0001217,UniParc:UPI00000B64E2,UniRef:UniRef100_Q2FXC3,UniRef:UniRef50_Q2FXC3,UniRef:UniRef90_Q2FXC3;ec_number=3.4.21.-
contig_1	Pyrodigal	gene	1947730	1948437	.	-	.	ID=GCA000560365_01865_gene;locus_tag=GCA000560365_01865;gene=splA
contig_1	Pyrodigal	CDS	1947730	1948437	.	-	0	ID=GCA000560365_01865;Name=serine protease SplA;locus_tag=GCA000560365_01865;product=serine protease SplA;Dbxref=GO:0004252,GO:0005576,GO:0006508;gene=splA;Parent=GCA000560365_01865_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001039435,COG:COG3591,COG:O,NCBIProtein:ABD31004.1,RefSeq:WP_001039435.1,SO:0001217,UniParc:UPI0000054332,UniRef:UniRef100_Q2FXC2,UniRef:UniRef50_Q2FXC2,UniRef:UniRef90_Q2FXC2;ec_number=3.4.21.-
contig_1	Pyrodigal	gene	1949402	1949968	.	+	.	ID=GCA000560365_01866_gene;locus_tag=GCA000560365_01866
contig_1	Pyrodigal	CDS	1949402	1949968	.	+	0	ID=GCA000560365_01866;Name=DUF4888 domain-containing protein;locus_tag=GCA000560365_01866;product=DUF4888 domain-containing protein;Parent=GCA000560365_01866_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001092763.1,SO:0001217,UniParc:UPI0000054331,UniRef:UniRef100_Q2FXC0,UniRef:UniRef50_Q2FXC0,UniRef:UniRef90_Q2FXC0
contig_1	Pyrodigal	gene	1950442	1951140	.	-	.	ID=GCA000560365_01867_gene;locus_tag=GCA000560365_01867
contig_1	Pyrodigal	CDS	1950442	1951140	.	-	0	ID=GCA000560365_01867;Name=Lantibiotic ABC transporter protein;locus_tag=GCA000560365_01867;product=Lantibiotic ABC transporter protein;Parent=GCA000560365_01867_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K20494,RefSeq:WP_000586140.1,SO:0001217,UniParc:UPI00000D9EC4,UniRef:UniRef100_Q2FXB9,UniRef:UniRef50_A0A6G4N7X5,UniRef:UniRef90_A0A6G4N7X5
contig_1	Pyrodigal	gene	1951137	1951898	.	-	.	ID=GCA000560365_01868_gene;locus_tag=GCA000560365_01868
contig_1	Pyrodigal	CDS	1951137	1951898	.	-	0	ID=GCA000560365_01868;Name=Membrane protein%2C putative;locus_tag=GCA000560365_01868;product=Membrane protein%2C putative;Parent=GCA000560365_01868_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K20491,RefSeq:WP_000581552.1,SO:0001217,UniParc:UPI000005432F,UniRef:UniRef100_Q2FXB8,UniRef:UniRef50_A3QNN9,UniRef:UniRef90_Q2FXB8
contig_1	Pyrodigal	gene	1951895	1952587	.	-	.	ID=GCA000560365_01869_gene;locus_tag=GCA000560365_01869
contig_1	Pyrodigal	CDS	1951895	1952587	.	-	0	ID=GCA000560365_01869;Name=Lantibiotic immunity protein F;locus_tag=GCA000560365_01869;product=Lantibiotic immunity protein F;Parent=GCA000560365_01869_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001096791.1,SO:0001217,UniParc:UPI00000D9EC5,UniRef:UniRef100_Q2FXB7,UniRef:UniRef50_A0A1S8TBK5,UniRef:UniRef90_A0A0H3K976
contig_1	Pyrodigal	gene	1952610	1953983	.	-	.	ID=GCA000560365_01870_gene;locus_tag=GCA000560365_01870
contig_1	Pyrodigal	CDS	1952610	1953983	.	-	0	ID=GCA000560365_01870;Name=Leader peptide-processing serine protease;locus_tag=GCA000560365_01870;product=Leader peptide-processing serine protease;Parent=GCA000560365_01870_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_031808151.1,SO:0001217,UniParc:UPI00045084E8,UniRef:UniRef100_UPI00045084E8,UniRef:UniRef50_A0A077UKA7,UniRef:UniRef90_Q2FXB6
contig_1	Pyrodigal	gene	1953993	1954511	.	-	.	ID=GCA000560365_01871_gene;locus_tag=GCA000560365_01871
contig_1	Pyrodigal	CDS	1953993	1954511	.	-	0	ID=GCA000560365_01871;Name=Lantibiotic modifying enzyme;locus_tag=GCA000560365_01871;product=Lantibiotic modifying enzyme;Parent=GCA000560365_01871_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000504439.1,SO:0001217,UniParc:UPI00000D9EC6,UniRef:UniRef100_Q2FXB5,UniRef:UniRef50_P30197,UniRef:UniRef90_A0A077UK13
contig_1	Pyrodigal	gene	1954527	1955771	.	-	.	ID=GCA000560365_01872_gene;locus_tag=GCA000560365_01872
contig_1	Pyrodigal	CDS	1954527	1955771	.	-	0	ID=GCA000560365_01872;Name=Lanthionine synthetase C-like family protein;locus_tag=GCA000560365_01872;product=Lanthionine synthetase C-like family protein;Parent=GCA000560365_01872_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K20484,RefSeq:WP_000566596.1,SO:0001217,UniParc:UPI00000D9EC7,UniRef:UniRef100_Q2FXB4,UniRef:UniRef50_A0A077UKI6,UniRef:UniRef90_A0A380ELY0;ec_number=3.13.2.4
contig_1	Pyrodigal	gene	1955764	1958757	.	-	.	ID=GCA000560365_01873_gene;locus_tag=GCA000560365_01873;gene=epiB
contig_1	Pyrodigal	CDS	1955764	1958757	.	-	0	ID=GCA000560365_01873;Name=Epidermin biosynthesis protein epiB;locus_tag=GCA000560365_01873;product=Epidermin biosynthesis protein epiB;gene=epiB;Parent=GCA000560365_01873_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K20483,RefSeq:WP_001092605.1,SO:0001217,UniParc:UPI0000696C78,UniRef:UniRef100_Q2FXB3,UniRef:UniRef50_A0A8G2HW37,UniRef:UniRef90_A0A8G2HW37;ec_number=3.13.2.4
contig_1	Pyrodigal	gene	1958822	1958965	.	-	.	ID=GCA000560365_01874_gene;locus_tag=GCA000560365_01874
contig_1	Pyrodigal	CDS	1958822	1958965	.	-	0	ID=GCA000560365_01874;Name=Lantibiotic;locus_tag=GCA000560365_01874;product=Lantibiotic;Parent=GCA000560365_01874_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000416756.1,SO:0001217,UniParc:UPI0000054328,UniRef:UniRef100_Q2FXB2,UniRef:UniRef50_I6XG59,UniRef:UniRef90_A0A7U7PYR9
contig_1	Pyrodigal	gene	1960087	1961070	.	-	.	ID=GCA000560365_01875_gene;locus_tag=GCA000560365_01875;gene=lukD
contig_1	Pyrodigal	CDS	1960087	1961070	.	-	0	ID=GCA000560365_01875;Name=bi-component leukocidin LukED subunit D;locus_tag=GCA000560365_01875;product=bi-component leukocidin LukED subunit D;Dbxref=GO:0005576,GO:0051715,GO:0090729;gene=lukD;Parent=GCA000560365_01875_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_088621910,NCBIProtein:CAA73668.1,RefSeq:WP_000782464.1,SO:0001217,UniParc:UPI00000522A5,UniRef:UniRef100_Q2FXB1,UniRef:UniRef50_Q2FVK1,UniRef:UniRef90_O54082
contig_1	Pyrodigal	gene	1961072	1962007	.	-	.	ID=GCA000560365_01876_gene;locus_tag=GCA000560365_01876;gene=lukE
contig_1	Pyrodigal	CDS	1961072	1962007	.	-	0	ID=GCA000560365_01876;Name=bi-component leukocidin LukED subunit E;locus_tag=GCA000560365_01876;product=bi-component leukocidin LukED subunit E;Dbxref=GO:0005576,GO:0051715,GO:0090729;gene=lukE;Parent=GCA000560365_01876_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_088621909,BlastRules:WP_114304764,NCBIProtein:RCV70079.1,RefSeq:WP_000473596.1,SO:0001217,UniParc:UPI00000D7779,UniRef:UniRef100_Q2FXB0,UniRef:UniRef50_O54081,UniRef:UniRef90_O54081
contig_1	Infernal	gene	1962515	1962664	.	-	.	ID=GCA000560365_01877_gene;locus_tag=GCA000560365_01877;gene=sprC
contig_1	Infernal	ncRNA	1962515	1962664	2.2e-26	-	.	ID=GCA000560365_01877;Name=Small pathogenicity island RNA C (srn_3610);locus_tag=GCA000560365_01877;gene=sprC;product=Small pathogenicity island RNA C (srn_3610);Dbxref=RFAM:RF02890;Parent=GCA000560365_01877_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02890
contig_1	Pyrodigal	gene	1962890	1963345	.	+	.	ID=GCA000560365_01878_gene;locus_tag=GCA000560365_01878
contig_1	Pyrodigal	CDS	1962890	1963345	.	+	0	ID=GCA000560365_01878;Name=DUF6978 domain-containing protein;locus_tag=GCA000560365_01878;product=DUF6978 domain-containing protein;Parent=GCA000560365_01878_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001086053.1,SO:0001217,UniParc:UPI0000696C79,UniRef:UniRef100_A0A5A8VDQ0,UniRef:UniRef50_Q2FXA9,UniRef:UniRef90_Q2FXA9
contig_1	Pyrodigal	gene	1963358	1963999	.	+	.	ID=GCA000560365_01879_gene;locus_tag=GCA000560365_01879
contig_1	Pyrodigal	CDS	1963358	1963999	.	+	0	ID=GCA000560365_01879;Name=DUF1828 domain-containing protein;locus_tag=GCA000560365_01879;product=DUF1828 domain-containing protein;Parent=GCA000560365_01879_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000696C7A,UniRef:UniRef100_Q2FXA8,UniRef:UniRef50_Q2FXA8,UniRef:UniRef90_Q2FXA8
contig_1	tRNAscan-SE	gene	1965388	1965476	.	-	.	ID=GCA000560365_01880_gene;locus_tag=GCA000560365_01880;gene=trnS
contig_1	tRNAscan-SE	tRNA	1965388	1965476	.	-	.	ID=GCA000560365_01880;Name=tRNA-Ser(gga);locus_tag=GCA000560365_01880;product=tRNA-Ser(gga);gene=trnS;anti_codon=gga;amino_acid=Ser;Parent=GCA000560365_01880_gene;inference=profile:tRNAscan:2.0;Note=SO:0000269
contig_1	tRNAscan-SE	gene	1965531	1965602	.	-	.	ID=GCA000560365_01881_gene;locus_tag=GCA000560365_01881;gene=trnE
contig_1	tRNAscan-SE	tRNA	1965531	1965602	.	-	.	ID=GCA000560365_01881;Name=tRNA-Glu(ttc);locus_tag=GCA000560365_01881;product=tRNA-Glu(ttc);gene=trnE;anti_codon=ttc;amino_acid=Glu;Parent=GCA000560365_01881_gene;inference=profile:tRNAscan:2.0;Note=SO:0000259
contig_1	tRNAscan-SE	gene	1965604	1965678	.	-	.	ID=GCA000560365_01882_gene;locus_tag=GCA000560365_01882;gene=trnN
contig_1	tRNAscan-SE	tRNA	1965604	1965678	.	-	.	ID=GCA000560365_01882;Name=tRNA-Asn(gtt);locus_tag=GCA000560365_01882;product=tRNA-Asn(gtt);gene=trnN;anti_codon=gtt;amino_acid=Asn;Parent=GCA000560365_01882_gene;inference=profile:tRNAscan:2.0;Note=SO:0000257
contig_1	tRNAscan-SE	gene	1965693	1965766	.	-	.	ID=GCA000560365_01883_gene;locus_tag=GCA000560365_01883;gene=trnG
contig_1	tRNAscan-SE	tRNA	1965693	1965766	.	-	.	ID=GCA000560365_01883;Name=tRNA-Gly(tcc);locus_tag=GCA000560365_01883;product=tRNA-Gly(tcc);gene=trnG;anti_codon=tcc;amino_acid=Gly;Parent=GCA000560365_01883_gene;inference=profile:tRNAscan:2.0;Note=SO:0000260
contig_1	tRNAscan-SE	gene	1965782	1965857	.	-	.	ID=GCA000560365_01884_gene;locus_tag=GCA000560365_01884;gene=trnH
contig_1	tRNAscan-SE	tRNA	1965782	1965857	.	-	.	ID=GCA000560365_01884;Name=tRNA-His(gtg);locus_tag=GCA000560365_01884;product=tRNA-His(gtg);gene=trnH;anti_codon=gtg;amino_acid=His;Parent=GCA000560365_01884_gene;inference=profile:tRNAscan:2.0;Note=SO:0000262
contig_1	tRNAscan-SE	gene	1965871	1965943	.	-	.	ID=GCA000560365_01885_gene;locus_tag=GCA000560365_01885;gene=trnF
contig_1	tRNAscan-SE	tRNA	1965871	1965943	.	-	.	ID=GCA000560365_01885;Name=tRNA-Phe(gaa);locus_tag=GCA000560365_01885;product=tRNA-Phe(gaa);gene=trnF;anti_codon=gaa;amino_acid=Phe;Parent=GCA000560365_01885_gene;inference=profile:tRNAscan:2.0;Note=SO:0000267
contig_1	tRNAscan-SE	gene	1965960	1966035	.	-	.	ID=GCA000560365_01886_gene;locus_tag=GCA000560365_01886;gene=trnD
contig_1	tRNAscan-SE	tRNA	1965960	1966035	.	-	.	ID=GCA000560365_01886;Name=tRNA-Asp(gtc);locus_tag=GCA000560365_01886;product=tRNA-Asp(gtc);gene=trnD;anti_codon=gtc;amino_acid=Asp;Parent=GCA000560365_01886_gene;inference=profile:tRNAscan:2.0;Note=SO:0000256
contig_1	tRNAscan-SE	gene	1966057	1966130	.	-	.	ID=GCA000560365_01887_gene;locus_tag=GCA000560365_01887;gene=trnfM
contig_1	tRNAscan-SE	tRNA	1966057	1966130	.	-	.	ID=GCA000560365_01887;Name=tRNA-fMet(cat);locus_tag=GCA000560365_01887;product=tRNA-fMet(cat);gene=trnfM;anti_codon=cat;amino_acid=fMet;Parent=GCA000560365_01887_gene;inference=profile:tRNAscan:2.0;Note=SO:0000266
contig_1	Infernal	gene	1966111	1966205	.	-	.	ID=GCA000560365_01888_gene;locus_tag=GCA000560365_01888;gene=S774
contig_1	Infernal	ncRNA	1966111	1966205	1.6e-14	-	.	ID=GCA000560365_01888;Name=Staphylococcus sRNA 774;locus_tag=GCA000560365_01888;product=Staphylococcus sRNA 774;Dbxref=RFAM:RF02896;Parent=GCA000560365_01888_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02896
contig_1	Pyrodigal	gene	1966602	1967156	.	-	.	ID=GCA000560365_01889_gene;locus_tag=GCA000560365_01889;gene=ydeN
contig_1	Pyrodigal	CDS	1966602	1967156	.	-	0	ID=GCA000560365_01889;Name=Serine hydrolase family protein;locus_tag=GCA000560365_01889;product=Serine hydrolase family protein;gene=ydeN;Parent=GCA000560365_01889_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3545,COG:R,RefSeq:WP_000132890.1,SO:0001217,UniParc:UPI00000D7833,UniRef:UniRef100_A0A0H3KHA1,UniRef:UniRef50_Q2FXA7,UniRef:UniRef90_Q2FXA7
contig_1	Pyrodigal	gene	1967479	1968879	.	-	.	ID=GCA000560365_01890_gene;locus_tag=GCA000560365_01890;gene=hemY
contig_1	Pyrodigal	CDS	1967479	1968879	.	-	0	ID=GCA000560365_01890;Name=protoporphyrinogen oxidase;locus_tag=GCA000560365_01890;product=protoporphyrinogen oxidase;Dbxref=GO:0004729,GO:0005737,GO:0006779,GO:0006783,GO:0016491;gene=hemY;Parent=GCA000560365_01890_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1232,COG:H,RefSeq:WP_000167538.1,SO:0001217,UniParc:UPI00004B5C4D,UniRef:UniRef100_Q2FXA5,UniRef:UniRef50_Q2FXA5,UniRef:UniRef90_Q2FXA5;ec_number=1.3.3.4
contig_1	Pyrodigal	gene	1968903	1969826	.	-	.	ID=GCA000560365_01891_gene;locus_tag=GCA000560365_01891;gene=hemH
contig_1	Pyrodigal	CDS	1968903	1969826	.	-	0	ID=GCA000560365_01891;Name=ferrochelatase;locus_tag=GCA000560365_01891;product=ferrochelatase;Dbxref=GO:0004325,GO:0005737,GO:0006779,GO:0006783,GO:0046872;gene=hemH;Parent=GCA000560365_01891_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0276,COG:H,KEGG:K01772,RefSeq:WP_000162881.1,SO:0001217,UniParc:UPI000012C5EF,UniRef:UniRef100_Q5HEU3,UniRef:UniRef50_P32396,UniRef:UniRef90_Q2FXA4;ec_number=4.99.1.9
contig_1	Pyrodigal	gene	1969884	1970921	.	-	.	ID=GCA000560365_01892_gene;locus_tag=GCA000560365_01892;gene=hemE
contig_1	Pyrodigal	CDS	1969884	1970921	.	-	0	ID=GCA000560365_01892;Name=uroporphyrinogen decarboxylase;locus_tag=GCA000560365_01892;product=uroporphyrinogen decarboxylase;Dbxref=GO:0004853,GO:0005829,GO:0006779,GO:0006782;gene=hemE;Parent=GCA000560365_01892_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0407,COG:H,KEGG:K01599,RefSeq:WP_000233526.1,SO:0001217,UniParc:UPI0000054321,UniRef:UniRef100_Q2FXA3,UniRef:UniRef50_P32395,UniRef:UniRef90_Q2FXA3;ec_number=4.1.1.37
contig_1	Pyrodigal	gene	1971184	1971687	.	+	.	ID=GCA000560365_01893_gene;locus_tag=GCA000560365_01893;gene=traP
contig_1	Pyrodigal	CDS	1971184	1971687	.	+	0	ID=GCA000560365_01893;Name=signal transduction protein TRAP;locus_tag=GCA000560365_01893;product=signal transduction protein TRAP;Dbxref=GO:0016020;gene=traP;Parent=GCA000560365_01893_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000737976,BlastRules:WP_001829811,RefSeq:WP_000737976.1,SO:0001217,UniParc:UPI0000049A4E,UniRef:UniRef100_Q2G2F3,UniRef:UniRef50_Q2G2F3,UniRef:UniRef90_Q2G2F3
contig_1	Pyrodigal	gene	1971811	1973034	.	-	.	ID=GCA000560365_01894_gene;locus_tag=GCA000560365_01894;gene=ecsB
contig_1	Pyrodigal	CDS	1971811	1973034	.	-	0	ID=GCA000560365_01894;Name=ABC transporter permease EcsB;locus_tag=GCA000560365_01894;product=ABC transporter permease EcsB;gene=ecsB;Parent=GCA000560365_01894_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4473,COG:U,KEGG:K25157,RefSeq:WP_001245769.1,SO:0001217,UniParc:UPI00004B5C4E,UniRef:UniRef100_Q2G2F2,UniRef:UniRef50_Q2G2F2,UniRef:UniRef90_Q2G2F2
contig_1	Pyrodigal	gene	1973027	1973767	.	-	.	ID=GCA000560365_01895_gene;locus_tag=GCA000560365_01895;gene=rbbA
contig_1	Pyrodigal	CDS	1973027	1973767	.	-	0	ID=GCA000560365_01895;Name=ABC transporter ATP-binding protein;locus_tag=GCA000560365_01895;product=ABC transporter ATP-binding protein;gene=rbbA;Parent=GCA000560365_01895_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1131,COG:JV,RefSeq:WP_000216878.1,SO:0001217,UniParc:UPI00004B5C4F,UniRef:UniRef100_Q2G2F1,UniRef:UniRef50_A0A0M9FN87,UniRef:UniRef90_A0A8G2HXZ9
contig_1	Pyrodigal	gene	1973901	1974323	.	+	.	ID=GCA000560365_01896_gene;locus_tag=GCA000560365_01896;gene=hinT
contig_1	Pyrodigal	CDS	1973901	1974323	.	+	0	ID=GCA000560365_01896;Name=HIT domain-containing protein;locus_tag=GCA000560365_01896;product=HIT domain-containing protein;gene=hinT;Parent=GCA000560365_01896_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0537,COG:FR,RefSeq:WP_000004981.1,SO:0001217,UniParc:UPI00000D76E8,UniRef:UniRef100_Q2G2F0,UniRef:UniRef50_A0A1D2KB85,UniRef:UniRef90_Q2G2F0
contig_1	Pyrodigal	gene	1974465	1974830	.	+	.	ID=GCA000560365_01897_gene;locus_tag=GCA000560365_01897;gene=gvpP
contig_1	Pyrodigal	CDS	1974465	1974830	.	+	0	ID=GCA000560365_01897;Name=YtxH domain-containing protein;locus_tag=GCA000560365_01897;product=YtxH domain-containing protein;gene=gvpP;Parent=GCA000560365_01897_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4980,COG:R,RefSeq:WP_000648118.1,SO:0001217,UniParc:UPI000005431B,UniRef:UniRef100_Q2G2T0,UniRef:UniRef50_A0A1S2MI30,UniRef:UniRef90_Q2G2T0
contig_1	Pyrodigal	gene	1975563	1976120	.	+	.	ID=GCA000560365_01898_gene;locus_tag=GCA000560365_01898
contig_1	Pyrodigal	CDS	1975563	1976120	.	+	0	ID=GCA000560365_01898;Name=DUF3267 domain-containing protein;locus_tag=GCA000560365_01898;product=DUF3267 domain-containing protein;Parent=GCA000560365_01898_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000477959.1,SO:0001217,UniParc:UPI000005431A,UniRef:UniRef100_Q2G2S9,UniRef:UniRef50_Q2G2S9,UniRef:UniRef90_Q2G2S9
contig_1	Pyrodigal	gene	1976325	1977287	.	+	.	ID=GCA000560365_01899_gene;locus_tag=GCA000560365_01899;gene=prsA
contig_1	Pyrodigal	CDS	1976325	1977287	.	+	0	ID=GCA000560365_01899;Name=Foldase protein PrsA;locus_tag=GCA000560365_01899;product=Foldase protein PrsA;Dbxref=GO:0005886,GO:0006457,GO:0140839,GO:0140840;gene=prsA;Parent=GCA000560365_01899_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0760,COG:O,RefSeq:WP_000782121.1,SO:0001217,UniParc:UPI000005229F,UniRef:UniRef100_Q2G2S6,UniRef:UniRef50_Q2G2S6,UniRef:UniRef90_Q2G2S6;ec_number=5.2.1.8
contig_1	Pyrodigal	gene	1977408	1978349	.	-	.	ID=GCA000560365_01900_gene;locus_tag=GCA000560365_01900;gene=yhaM
contig_1	Pyrodigal	CDS	1977408	1978349	.	-	0	ID=GCA000560365_01900;Name=3'-5' exoribonuclease YhaM;locus_tag=GCA000560365_01900;product=3'-5' exoribonuclease YhaM;gene=yhaM;Parent=GCA000560365_01900_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3481,COG:J,KEGG:K03698,RefSeq:WP_001244175.1,SO:0001217,UniParc:UPI0000052249,UniRef:UniRef100_Q2G2T1,UniRef:UniRef50_Q9KDN6,UniRef:UniRef90_Q2G2T1;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	1978346	1981282	.	-	.	ID=GCA000560365_01901_gene;locus_tag=GCA000560365_01901;gene=yhaN
contig_1	Pyrodigal	CDS	1978346	1981282	.	-	0	ID=GCA000560365_01901;Name=putative protein YhaN AAA domain-containing protein;locus_tag=GCA000560365_01901;product=putative protein YhaN AAA domain-containing protein;gene=yhaN;Parent=GCA000560365_01901_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4717,COG:S,RefSeq:WP_000584648.1,SO:0001217,UniParc:UPI00004B5C50,UniRef:UniRef100_Q2G2S8,UniRef:UniRef50_B9DMY3,UniRef:UniRef90_Q2G2S8
contig_1	Pyrodigal	gene	1981272	1982468	.	-	.	ID=GCA000560365_01902_gene;locus_tag=GCA000560365_01902;gene=sbcD
contig_1	Pyrodigal	CDS	1981272	1982468	.	-	0	ID=GCA000560365_01902;Name=Calcineurin-like phosphoesterase domain-containing protein;locus_tag=GCA000560365_01902;product=Calcineurin-like phosphoesterase domain-containing protein;gene=sbcD;Parent=GCA000560365_01902_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0420,COG:L,RefSeq:WP_000238227.1,SO:0001217,UniParc:UPI0000054317,UniRef:UniRef100_Q2G2S7,UniRef:UniRef50_Q2G2S7,UniRef:UniRef90_Q2G2S7
contig_1	Pyrodigal	gene	1983240	1983584	.	-	.	ID=GCA000560365_01903_gene;locus_tag=GCA000560365_01903;gene=ylbF
contig_1	Pyrodigal	CDS	1983240	1983584	.	-	0	ID=GCA000560365_01903;Name=YlbF/YmcA family competence regulator;locus_tag=GCA000560365_01903;product=YlbF/YmcA family competence regulator;gene=ylbF;Parent=GCA000560365_01903_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3679,COG:T,RefSeq:WP_000290301.1,SO:0001217,UniParc:UPI0000054315,UniRef:UniRef100_Q2FXA0,UniRef:UniRef50_Q2FXA0,UniRef:UniRef90_Q2FXA0
contig_1	Pyrodigal	gene	1983653	1984777	.	-	.	ID=GCA000560365_01904_gene;locus_tag=GCA000560365_01904;gene=yheB
contig_1	Pyrodigal	CDS	1983653	1984777	.	-	0	ID=GCA000560365_01904;Name=UPF0754 membrane protein SAOUHSC_01978;locus_tag=GCA000560365_01904;product=UPF0754 membrane protein SAOUHSC_01978;Dbxref=GO:0005886;gene=yheB;Parent=GCA000560365_01904_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4399,COG:S,RefSeq:WP_000992527.1,SO:0001217,UniParc:UPI00004B5C51,UniRef:UniRef100_Q2FX99,UniRef:UniRef50_Q2FX99,UniRef:UniRef90_Q2FX99
contig_1	Pyrodigal	gene	1984956	1985420	.	-	.	ID=GCA000560365_01905_gene;locus_tag=GCA000560365_01905;gene=xRE
contig_1	Pyrodigal	CDS	1984956	1985420	.	-	0	ID=GCA000560365_01905;Name=HTH cro/C1-type domain-containing protein;locus_tag=GCA000560365_01905;product=HTH cro/C1-type domain-containing protein;gene=xRE;Parent=GCA000560365_01905_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1476,COG:K,RefSeq:WP_000375864.1,SO:0001217,UniParc:UPI00000D780E,UniRef:UniRef100_Q2FX98,UniRef:UniRef50_Q2FX98,UniRef:UniRef90_Q2FX98
contig_1	Pyrodigal	gene	1985776	1986399	.	-	.	ID=GCA000560365_01906_gene;locus_tag=GCA000560365_01906;gene=citB
contig_1	Pyrodigal	CDS	1985776	1986399	.	-	0	ID=GCA000560365_01906;Name=DNA-binding response regulator;locus_tag=GCA000560365_01906;product=DNA-binding response regulator;gene=citB;Parent=GCA000560365_01906_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2197,COG:TK,RefSeq:WP_001045133.1,SO:0001217,UniParc:UPI0000054A4B,UniRef:UniRef100_Q2FX97,UniRef:UniRef50_S2XG46,UniRef:UniRef90_A0A2W2R098
contig_1	Pyrodigal	gene	1986421	1987533	.	-	.	ID=GCA000560365_01907_gene;locus_tag=GCA000560365_01907;gene=comP
contig_1	Pyrodigal	CDS	1986421	1987533	.	-	0	ID=GCA000560365_01907;Name=histidine kinase;locus_tag=GCA000560365_01907;product=histidine kinase;gene=comP;Parent=GCA000560365_01907_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4585,COG:T,RefSeq:WP_000437967.1,SO:0001217,UniParc:UPI00003B17C9,UniRef:UniRef100_Q2FX96,UniRef:UniRef50_A0A380G577,UniRef:UniRef90_A0A077UMX2
contig_1	Pyrodigal	gene	1987696	1988517	.	+	.	ID=GCA000560365_01908_gene;locus_tag=GCA000560365_01908;gene=rluA
contig_1	Pyrodigal	CDS	1987696	1988517	.	+	0	ID=GCA000560365_01908;Name=Pseudouridine synthase;locus_tag=GCA000560365_01908;product=Pseudouridine synthase;gene=rluA;Parent=GCA000560365_01908_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0564,COG:J,RefSeq:WP_000669376.1,SO:0001217,UniParc:UPI0000054A55,UniRef:UniRef100_Q2FX95,UniRef:UniRef50_A0A239YUZ3,UniRef:UniRef90_A0A7U7PYN7
contig_1	Pyrodigal	gene	1988980	1990365	.	-	.	ID=GCA000560365_01909_gene;locus_tag=GCA000560365_01909;gene=fumC
contig_1	Pyrodigal	CDS	1988980	1990365	.	-	0	ID=GCA000560365_01909;Name=class II fumarate hydratase;locus_tag=GCA000560365_01909;product=class II fumarate hydratase;Dbxref=GO:0004333,GO:0005737,GO:0006099,GO:0006106,GO:0006108,GO:0045239;gene=fumC;Parent=GCA000560365_01909_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0114,KEGG:K01679,RefSeq:WP_000116224.1,SO:0001217,UniParc:UPI0000054A68,UniRef:UniRef100_Q5HES4,UniRef:UniRef50_P64172,UniRef:UniRef90_P64172;ec_number=4.2.1.2
contig_1	Pyrodigal	gene	1990561	1990956	.	-	.	ID=GCA000560365_01910_gene;locus_tag=GCA000560365_01910
contig_1	Pyrodigal	CDS	1990561	1990956	.	-	0	ID=GCA000560365_01910;Name=DUF2975 domain-containing protein;locus_tag=GCA000560365_01910;product=DUF2975 domain-containing protein;Parent=GCA000560365_01910_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000901021.1,SO:0001217,UniParc:UPI00004B5C52,UniRef:UniRef100_Q2FX93,UniRef:UniRef50_Q2FX93,UniRef:UniRef90_Q2FX93
contig_1	Pyrodigal	gene	1991733	1991885	.	-	.	ID=GCA000560365_01911_gene;locus_tag=GCA000560365_01911
contig_1	Pyrodigal	CDS	1991733	1991885	.	-	0	ID=GCA000560365_01911;Name=SAS053 family DNA gyrase inhibitor;locus_tag=GCA000560365_01911;product=SAS053 family DNA gyrase inhibitor;Dbxref=GO:0090729;Parent=GCA000560365_01911_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000031108.1,SO:0001217,UniParc:UPI00000D7729,UniRef:UniRef100_Q2FX91,UniRef:UniRef50_Q2FX91,UniRef:UniRef90_Q2FX91
contig_1	Pyrodigal	gene	1991910	1992509	.	-	.	ID=GCA000560365_01912_gene;locus_tag=GCA000560365_01912;gene=nagB
contig_1	Pyrodigal	CDS	1991910	1992509	.	-	0	ID=GCA000560365_01912;Name=Glucosamine-6-phosphate isomerase;locus_tag=GCA000560365_01912;product=Glucosamine-6-phosphate isomerase;gene=nagB;Parent=GCA000560365_01912_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0363,COG:G,RefSeq:WP_001251224.1,SO:0001217,UniParc:UPI00000D77DC,UniRef:UniRef100_Q2FX90,UniRef:UniRef50_Q2FX90,UniRef:UniRef90_Q2FX90
contig_1	Pyrodigal	gene	1992668	1993138	.	-	.	ID=GCA000560365_01913_gene;locus_tag=GCA000560365_01913;gene=trmL
contig_1	Pyrodigal	CDS	1992668	1993138	.	-	0	ID=GCA000560365_01913;Name=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;locus_tag=GCA000560365_01913;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;Dbxref=GO:0006400,GO:0008175;gene=trmL;Parent=GCA000560365_01913_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0219,COG:J,KEGG:K03216,RefSeq:WP_000181398.1,SO:0001217,UniParc:UPI0000054A9B,UniRef:UniRef100_Q2FX89,UniRef:UniRef50_A2RKW7,UniRef:UniRef90_Q2FX89;ec_number=2.1.1.207
contig_1	Pyrodigal	gene	1993143	1994270	.	-	.	ID=GCA000560365_01914_gene;locus_tag=GCA000560365_01914;gene=queG
contig_1	Pyrodigal	CDS	1993143	1994270	.	-	0	ID=GCA000560365_01914;Name=tRNA epoxyqueuosine(34) reductase QueG;locus_tag=GCA000560365_01914;product=tRNA epoxyqueuosine(34) reductase QueG;Dbxref=GO:0005737,GO:0006400,GO:0008033,GO:0008616,GO:0046872,GO:0051539,GO:0052693;gene=queG;Parent=GCA000560365_01914_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1600,COG:J,KEGG:K18979,RefSeq:WP_000379978.1,SO:0001217,UniParc:UPI00004B5C53,UniRef:UniRef100_A0A0D6HCX7,UniRef:UniRef50_P97030,UniRef:UniRef90_Q2FX88;ec_number=1.17.99.6
contig_1	Pyrodigal	gene	1994421	1995149	.	-	.	ID=GCA000560365_01915_gene;locus_tag=GCA000560365_01915;gene=glnQ
contig_1	Pyrodigal	CDS	1994421	1995149	.	-	0	ID=GCA000560365_01915;Name=Glutamine transport ATP-binding protein glnQ;locus_tag=GCA000560365_01915;product=Glutamine transport ATP-binding protein glnQ;gene=glnQ;Parent=GCA000560365_01915_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1126,COG:E,RefSeq:WP_001144055.1,SO:0001217,UniParc:UPI0000054AAF,UniRef:UniRef100_Q2FX87,UniRef:UniRef50_W0QFA6,UniRef:UniRef90_A0A2S6DLA3
contig_1	Pyrodigal	gene	1995136	1996593	.	-	.	ID=GCA000560365_01916_gene;locus_tag=GCA000560365_01916;gene=hisJ
contig_1	Pyrodigal	CDS	1995136	1996593	.	-	0	ID=GCA000560365_01916;Name=ABC transporter%2C permease protein%2C putative;locus_tag=GCA000560365_01916;product=ABC transporter%2C permease protein%2C putative;gene=hisJ;Parent=GCA000560365_01916_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0834,COG:ET,RefSeq:WP_000649907.1,SO:0001217,UniParc:UPI00000D9ED6,UniRef:UniRef100_Q2FX86,UniRef:UniRef50_A0A239YWZ0,UniRef:UniRef90_Q2FX86
contig_1	Pyrodigal	gene	1996851	1997912	.	-	.	ID=GCA000560365_01917_gene;locus_tag=GCA000560365_01917;gene=pfoR
contig_1	Pyrodigal	CDS	1996851	1997912	.	-	0	ID=GCA000560365_01917;Name=Phosphotransferase system EIIC domain-containing protein;locus_tag=GCA000560365_01917;product=Phosphotransferase system EIIC domain-containing protein;gene=pfoR;Parent=GCA000560365_01917_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3641,COG:T,KEGG:K07035,RefSeq:WP_000063582.1,SO:0001217,UniParc:UPI0000054B58,UniRef:UniRef100_Q2FX85,UniRef:UniRef50_B9DMY0,UniRef:UniRef90_A0A6B0D056
contig_1	Infernal	gene	1998339	1998396	.	-	.	ID=GCA000560365_01918_gene;locus_tag=GCA000560365_01918;gene=sau-5949
contig_1	Infernal	ncRNA	1998339	1998396	3.3e-12	-	.	ID=GCA000560365_01918;Name=Staphylococcus sRNA sau-5949;locus_tag=GCA000560365_01918;product=Staphylococcus sRNA sau-5949;Dbxref=RFAM:RF02396;Parent=GCA000560365_01918_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02396
contig_1	Pyrodigal	gene	1998405	1999766	.	+	.	ID=GCA000560365_01919_gene;locus_tag=GCA000560365_01919;gene=tnp
contig_1	Pyrodigal	CDS	1998405	1999766	.	+	0	ID=GCA000560365_01919;Name=ISL3 family IS1181 transposase;locus_tag=GCA000560365_01919;product=ISL3 family IS1181 transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000560365_01919_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3464,COG:X,IS:IS1181,KEGG:K07485,SO:0001217,UniParc:UPI00015FD73D,UniRef:UniRef100_A0A1S6D7P4,UniRef:UniRef50_A0A380DS67,UniRef:UniRef90_A0A380DS67
contig_1	tRNAscan-SE	gene	1999859	1999942	.	-	.	ID=GCA000560365_01920_gene;locus_tag=GCA000560365_01920;gene=trnL
contig_1	tRNAscan-SE	tRNA	1999859	1999942	.	-	.	ID=GCA000560365_01920;Name=tRNA-Leu(caa);locus_tag=GCA000560365_01920;product=tRNA-Leu(caa);gene=trnL;anti_codon=caa;amino_acid=Leu;Parent=GCA000560365_01920_gene;inference=profile:tRNAscan:2.0;Note=SO:0000264
contig_1	tRNAscan-SE	gene	1999981	2000055	.	-	.	ID=GCA000560365_01921_gene;locus_tag=GCA000560365_01921;gene=trnG
contig_1	tRNAscan-SE	tRNA	1999981	2000055	.	-	.	ID=GCA000560365_01921;Name=tRNA-Gly(tcc);locus_tag=GCA000560365_01921;product=tRNA-Gly(tcc);gene=trnG;anti_codon=tcc;amino_acid=Gly;Parent=GCA000560365_01921_gene;inference=profile:tRNAscan:2.0;Note=SO:0000260
contig_1	tRNAscan-SE	gene	2000069	2000143	.	-	.	ID=GCA000560365_01922_gene;locus_tag=GCA000560365_01922;gene=trnG;pseudogene=unknown
contig_1	tRNAscan-SE	tRNA	2000069	2000143	.	-	.	ID=GCA000560365_01922;Name=tRNA-Gly(tcc);locus_tag=GCA000560365_01922;product=tRNA-Gly(tcc);gene=trnG;pseudogene=unknown;anti_codon=tcc;amino_acid=Gly;Parent=GCA000560365_01922_gene;inference=profile:tRNAscan:2.0;Note=SO:0000260
contig_1	tRNAscan-SE	gene	2000159	2000233	.	-	.	ID=GCA000560365_01923_gene;locus_tag=GCA000560365_01923;gene=trnG
contig_1	tRNAscan-SE	tRNA	2000159	2000233	.	-	.	ID=GCA000560365_01923;Name=tRNA-Gly(tcc);locus_tag=GCA000560365_01923;product=tRNA-Gly(tcc);gene=trnG;anti_codon=tcc;amino_acid=Gly;Parent=GCA000560365_01923_gene;inference=profile:tRNAscan:2.0;Note=SO:0000260
contig_1	tRNAscan-SE	gene	2000241	2000314	.	-	.	ID=GCA000560365_01924_gene;locus_tag=GCA000560365_01924;gene=trnC
contig_1	tRNAscan-SE	tRNA	2000241	2000314	.	-	.	ID=GCA000560365_01924;Name=tRNA-Cys(gca);locus_tag=GCA000560365_01924;product=tRNA-Cys(gca);gene=trnC;anti_codon=gca;amino_acid=Cys;Parent=GCA000560365_01924_gene;inference=profile:tRNAscan:2.0;Note=SO:0000258
contig_1	tRNAscan-SE	gene	2000320	2000391	.	-	.	ID=GCA000560365_01925_gene;locus_tag=GCA000560365_01925;gene=trnQ
contig_1	tRNAscan-SE	tRNA	2000320	2000391	.	-	.	ID=GCA000560365_01925;Name=tRNA-Gln(ttg);locus_tag=GCA000560365_01925;product=tRNA-Gln(ttg);gene=trnQ;anti_codon=ttg;amino_acid=Gln;Parent=GCA000560365_01925_gene;inference=profile:tRNAscan:2.0;Note=SO:0000261
contig_1	tRNAscan-SE	gene	2000403	2000475	.	-	.	ID=GCA000560365_01926_gene;locus_tag=GCA000560365_01926;gene=trnH
contig_1	tRNAscan-SE	tRNA	2000403	2000475	.	-	.	ID=GCA000560365_01926;Name=tRNA-His(gtg);locus_tag=GCA000560365_01926;product=tRNA-His(gtg);gene=trnH;anti_codon=gtg;amino_acid=His;Parent=GCA000560365_01926_gene;inference=profile:tRNAscan:2.0;Note=SO:0000262
contig_1	tRNAscan-SE	gene	2000478	2000551	.	-	.	ID=GCA000560365_01927_gene;locus_tag=GCA000560365_01927;gene=trnW
contig_1	tRNAscan-SE	tRNA	2000478	2000551	.	-	.	ID=GCA000560365_01927;Name=tRNA-Trp(cca);locus_tag=GCA000560365_01927;product=tRNA-Trp(cca);gene=trnW;anti_codon=cca;amino_acid=Trp;Parent=GCA000560365_01927_gene;inference=profile:tRNAscan:2.0;Note=SO:0000271
contig_1	tRNAscan-SE	gene	2000567	2000647	.	-	.	ID=GCA000560365_01928_gene;locus_tag=GCA000560365_01928;gene=trnY
contig_1	tRNAscan-SE	tRNA	2000567	2000647	.	-	.	ID=GCA000560365_01928;Name=tRNA-Tyr(gta);locus_tag=GCA000560365_01928;product=tRNA-Tyr(gta);gene=trnY;anti_codon=gta;amino_acid=Tyr;Parent=GCA000560365_01928_gene;inference=profile:tRNAscan:2.0;Note=SO:0000272
contig_1	tRNAscan-SE	gene	2000653	2000728	.	-	.	ID=GCA000560365_01929_gene;locus_tag=GCA000560365_01929;gene=trnT
contig_1	tRNAscan-SE	tRNA	2000653	2000728	.	-	.	ID=GCA000560365_01929;Name=tRNA-Thr(tgt);locus_tag=GCA000560365_01929;product=tRNA-Thr(tgt);gene=trnT;anti_codon=tgt;amino_acid=Thr;Parent=GCA000560365_01929_gene;inference=profile:tRNAscan:2.0;Note=SO:0000270
contig_1	tRNAscan-SE	gene	2000736	2000808	.	-	.	ID=GCA000560365_01930_gene;locus_tag=GCA000560365_01930;gene=trnF
contig_1	tRNAscan-SE	tRNA	2000736	2000808	.	-	.	ID=GCA000560365_01930;Name=tRNA-Phe(gaa);locus_tag=GCA000560365_01930;product=tRNA-Phe(gaa);gene=trnF;anti_codon=gaa;amino_acid=Phe;Parent=GCA000560365_01930_gene;inference=profile:tRNAscan:2.0;Note=SO:0000267
contig_1	tRNAscan-SE	gene	2000827	2000902	.	-	.	ID=GCA000560365_01931_gene;locus_tag=GCA000560365_01931;gene=trnD
contig_1	tRNAscan-SE	tRNA	2000827	2000902	.	-	.	ID=GCA000560365_01931;Name=tRNA-Asp(gtc);locus_tag=GCA000560365_01931;product=tRNA-Asp(gtc);gene=trnD;anti_codon=gtc;amino_acid=Asp;Parent=GCA000560365_01931_gene;inference=profile:tRNAscan:2.0;Note=SO:0000256
contig_1	tRNAscan-SE	gene	2000912	2000985	.	-	.	ID=GCA000560365_01932_gene;locus_tag=GCA000560365_01932;gene=trnfM
contig_1	tRNAscan-SE	tRNA	2000912	2000985	.	-	.	ID=GCA000560365_01932;Name=tRNA-fMet(cat);locus_tag=GCA000560365_01932;product=tRNA-fMet(cat);gene=trnfM;anti_codon=cat;amino_acid=fMet;Parent=GCA000560365_01932_gene;inference=profile:tRNAscan:2.0;Note=SO:0000266
contig_1	tRNAscan-SE	gene	2001000	2001092	.	-	.	ID=GCA000560365_01933_gene;locus_tag=GCA000560365_01933;gene=trnS
contig_1	tRNAscan-SE	tRNA	2001000	2001092	.	-	.	ID=GCA000560365_01933;Name=tRNA-Ser(tga);locus_tag=GCA000560365_01933;product=tRNA-Ser(tga);gene=trnS;anti_codon=tga;amino_acid=Ser;Parent=GCA000560365_01933_gene;inference=profile:tRNAscan:2.0;Note=SO:0000269
contig_1	tRNAscan-SE	gene	2001131	2001206	.	-	.	ID=GCA000560365_01934_gene;locus_tag=GCA000560365_01934;gene=trnD
contig_1	tRNAscan-SE	tRNA	2001131	2001206	.	-	.	ID=GCA000560365_01934;Name=tRNA-Asp(gtc);locus_tag=GCA000560365_01934;product=tRNA-Asp(gtc);gene=trnD;anti_codon=gtc;amino_acid=Asp;Parent=GCA000560365_01934_gene;inference=profile:tRNAscan:2.0;Note=SO:0000256
contig_1	tRNAscan-SE	gene	2001217	2001306	.	-	.	ID=GCA000560365_01935_gene;locus_tag=GCA000560365_01935;gene=trnS
contig_1	tRNAscan-SE	tRNA	2001217	2001306	.	-	.	ID=GCA000560365_01935;Name=tRNA-Ser(tga);locus_tag=GCA000560365_01935;product=tRNA-Ser(tga);gene=trnS;anti_codon=tga;amino_acid=Ser;Parent=GCA000560365_01935_gene;inference=profile:tRNAscan:2.0;Note=SO:0000269
contig_1	tRNAscan-SE	gene	2001316	2001389	.	-	.	ID=GCA000560365_01936_gene;locus_tag=GCA000560365_01936;gene=trnI
contig_1	tRNAscan-SE	tRNA	2001316	2001389	.	-	.	ID=GCA000560365_01936;Name=tRNA-Ile2(cat);locus_tag=GCA000560365_01936;product=tRNA-Ile2(cat);gene=trnI;anti_codon=cat;amino_acid=Ile2;Parent=GCA000560365_01936_gene;inference=profile:tRNAscan:2.0;Note=SO:0000263
contig_1	tRNAscan-SE	gene	2001418	2001491	.	-	.	ID=GCA000560365_01937_gene;locus_tag=GCA000560365_01937;gene=trnM
contig_1	tRNAscan-SE	tRNA	2001418	2001491	.	-	.	ID=GCA000560365_01937;Name=tRNA-Met(cat);locus_tag=GCA000560365_01937;product=tRNA-Met(cat);gene=trnM;anti_codon=cat;amino_acid=Met;Parent=GCA000560365_01937_gene;inference=profile:tRNAscan:2.0;Note=SO:0000266
contig_1	tRNAscan-SE	gene	2001513	2001588	.	-	.	ID=GCA000560365_01938_gene;locus_tag=GCA000560365_01938;gene=trnA
contig_1	tRNAscan-SE	tRNA	2001513	2001588	.	-	.	ID=GCA000560365_01938;Name=tRNA-Ala(tgc);locus_tag=GCA000560365_01938;product=tRNA-Ala(tgc);gene=trnA;anti_codon=tgc;amino_acid=Ala;Parent=GCA000560365_01938_gene;inference=profile:tRNAscan:2.0;Note=SO:0000254
contig_1	tRNAscan-SE	gene	2001606	2001679	.	-	.	ID=GCA000560365_01939_gene;locus_tag=GCA000560365_01939;gene=trnP
contig_1	tRNAscan-SE	tRNA	2001606	2001679	.	-	.	ID=GCA000560365_01939;Name=tRNA-Pro(tgg);locus_tag=GCA000560365_01939;product=tRNA-Pro(tgg);gene=trnP;anti_codon=tgg;amino_acid=Pro;Parent=GCA000560365_01939_gene;inference=profile:tRNAscan:2.0;Note=SO:0000268
contig_1	tRNAscan-SE	gene	2001689	2001762	.	-	.	ID=GCA000560365_01940_gene;locus_tag=GCA000560365_01940;gene=trnR
contig_1	tRNAscan-SE	tRNA	2001689	2001762	.	-	.	ID=GCA000560365_01940;Name=tRNA-Arg(acg);locus_tag=GCA000560365_01940;product=tRNA-Arg(acg);gene=trnR;anti_codon=acg;amino_acid=Arg;Parent=GCA000560365_01940_gene;inference=profile:tRNAscan:2.0;Note=SO:0001036
contig_1	tRNAscan-SE	gene	2001781	2001869	.	-	.	ID=GCA000560365_01941_gene;locus_tag=GCA000560365_01941;gene=trnL
contig_1	tRNAscan-SE	tRNA	2001781	2001869	.	-	.	ID=GCA000560365_01941;Name=tRNA-Leu(taa);locus_tag=GCA000560365_01941;product=tRNA-Leu(taa);gene=trnL;anti_codon=taa;amino_acid=Leu;Parent=GCA000560365_01941_gene;inference=profile:tRNAscan:2.0;Note=SO:0000264
contig_1	tRNAscan-SE	gene	2001880	2001954	.	-	.	ID=GCA000560365_01942_gene;locus_tag=GCA000560365_01942;gene=trnG
contig_1	tRNAscan-SE	tRNA	2001880	2001954	.	-	.	ID=GCA000560365_01942;Name=tRNA-Gly(gcc);locus_tag=GCA000560365_01942;product=tRNA-Gly(gcc);gene=trnG;anti_codon=gcc;amino_acid=Gly;Parent=GCA000560365_01942_gene;inference=profile:tRNAscan:2.0;Note=SO:0000260
contig_1	tRNAscan-SE	gene	2001958	2002039	.	-	.	ID=GCA000560365_01943_gene;locus_tag=GCA000560365_01943;gene=trnL
contig_1	tRNAscan-SE	tRNA	2001958	2002039	.	-	.	ID=GCA000560365_01943;Name=tRNA-Leu(tag);locus_tag=GCA000560365_01943;product=tRNA-Leu(tag);gene=trnL;anti_codon=tag;amino_acid=Leu;Parent=GCA000560365_01943_gene;inference=profile:tRNAscan:2.0;Note=SO:0000264
contig_1	tRNAscan-SE	gene	2002043	2002118	.	-	.	ID=GCA000560365_01944_gene;locus_tag=GCA000560365_01944;gene=trnK
contig_1	tRNAscan-SE	tRNA	2002043	2002118	.	-	.	ID=GCA000560365_01944;Name=tRNA-Lys(ttt);locus_tag=GCA000560365_01944;product=tRNA-Lys(ttt);gene=trnK;anti_codon=ttt;amino_acid=Lys;Parent=GCA000560365_01944_gene;inference=profile:tRNAscan:2.0;Note=SO:0000265
contig_1	tRNAscan-SE	gene	2002124	2002199	.	-	.	ID=GCA000560365_01945_gene;locus_tag=GCA000560365_01945;gene=trnT
contig_1	tRNAscan-SE	tRNA	2002124	2002199	.	-	.	ID=GCA000560365_01945;Name=tRNA-Thr(tgt);locus_tag=GCA000560365_01945;product=tRNA-Thr(tgt);gene=trnT;anti_codon=tgt;amino_acid=Thr;Parent=GCA000560365_01945_gene;inference=profile:tRNAscan:2.0;Note=SO:0000270
contig_1	tRNAscan-SE	gene	2002216	2002291	.	-	.	ID=GCA000560365_01946_gene;locus_tag=GCA000560365_01946;gene=trnV
contig_1	tRNAscan-SE	tRNA	2002216	2002291	.	-	.	ID=GCA000560365_01946;Name=tRNA-Val(tac);locus_tag=GCA000560365_01946;product=tRNA-Val(tac);gene=trnV;anti_codon=tac;amino_acid=Val;Parent=GCA000560365_01946_gene;inference=profile:tRNAscan:2.0;Note=SO:0000273
contig_1	Infernal	gene	2002303	2002417	.	-	.	ID=GCA000560365_01947_gene;locus_tag=GCA000560365_01947;gene=rrf
contig_1	Infernal	rRNA	2002303	2002417	1.1e-14	-	.	ID=GCA000560365_01947;Name=5S ribosomal RNA;locus_tag=GCA000560365_01947;gene=rrf;product=5S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00001;Parent=GCA000560365_01947_gene;Note=KEGG:K01985,SO:0000652;inference=profile:Rfam:RF00001
contig_1	Infernal	gene	2002490	2005412	.	-	.	ID=GCA000560365_01948_gene;locus_tag=GCA000560365_01948;gene=rrl
contig_1	Infernal	rRNA	2002490	2005412	1.4e-06	-	.	ID=GCA000560365_01948;Name=23S ribosomal RNA;locus_tag=GCA000560365_01948;gene=rrl;product=23S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF02541;Parent=GCA000560365_01948_gene;Note=KEGG:K01980,SO:0001001;inference=profile:Rfam:RF02541
contig_1	tRNAscan-SE	gene	2005626	2005701	.	-	.	ID=GCA000560365_01949_gene;locus_tag=GCA000560365_01949;gene=trnA
contig_1	tRNAscan-SE	tRNA	2005626	2005701	.	-	.	ID=GCA000560365_01949;Name=tRNA-Ala(tgc);locus_tag=GCA000560365_01949;product=tRNA-Ala(tgc);gene=trnA;anti_codon=tgc;amino_acid=Ala;Parent=GCA000560365_01949_gene;inference=profile:tRNAscan:2.0;Note=SO:0000254
contig_1	tRNAscan-SE	gene	2005720	2005796	.	-	.	ID=GCA000560365_01950_gene;locus_tag=GCA000560365_01950;gene=trnI
contig_1	tRNAscan-SE	tRNA	2005720	2005796	.	-	.	ID=GCA000560365_01950;Name=tRNA-Ile(gat);locus_tag=GCA000560365_01950;product=tRNA-Ile(gat);gene=trnI;anti_codon=gat;amino_acid=Ile;Parent=GCA000560365_01950_gene;inference=profile:tRNAscan:2.0;Note=SO:0000263
contig_1	Infernal	gene	2005888	2007439	.	-	.	ID=GCA000560365_01951_gene;locus_tag=GCA000560365_01951;gene=rrs
contig_1	Infernal	rRNA	2005888	2007439	1.1e-49	-	.	ID=GCA000560365_01951;Name=16S ribosomal RNA;locus_tag=GCA000560365_01951;gene=rrs;product=16S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00177;Parent=GCA000560365_01951_gene;Note=KEGG:K01977,SO:0001000;inference=profile:Rfam:RF00177
contig_1	Pyrodigal	gene	2008180	2008626	.	-	.	ID=GCA000560365_01952_gene;locus_tag=GCA000560365_01952;gene=perR
contig_1	Pyrodigal	CDS	2008180	2008626	.	-	0	ID=GCA000560365_01952;Name=peroxide-responsive transcriptional repressor PerR;locus_tag=GCA000560365_01952;product=peroxide-responsive transcriptional repressor PerR;Dbxref=GO:0000976,GO:0003700,GO:0005737,GO:0008270,GO:0045892,GO:1900376;gene=perR;Parent=GCA000560365_01952_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000110011,BlastRules:WP_002858684,BlastRules:WP_002987920,BlastRules:WP_003223285,COG:COG0735,COG:P,RefSeq:WP_000110011.1,SO:0001217,UniParc:UPI00000522DC,UniRef:UniRef100_Q2G282,UniRef:UniRef50_Q2G282,UniRef:UniRef90_Q2G282
contig_1	Pyrodigal	gene	2008723	2009682	.	-	.	ID=GCA000560365_01953_gene;locus_tag=GCA000560365_01953;gene=serA
contig_1	Pyrodigal	CDS	2008723	2009682	.	-	0	ID=GCA000560365_01953;Name=Hydroxyacid dehydrogenase;locus_tag=GCA000560365_01953;product=Hydroxyacid dehydrogenase;gene=serA;Parent=GCA000560365_01953_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0111,COG:H,SO:0001217,UniParc:UPI0002CB05EE,UniRef:UniRef100_Q2G281,UniRef:UniRef50_Q2G281,UniRef:UniRef90_Q2G281
contig_1	Pyrodigal	gene	2009679	2010134	.	-	.	ID=GCA000560365_01954_gene;locus_tag=GCA000560365_01954;gene=bcp
contig_1	Pyrodigal	CDS	2009679	2010134	.	-	0	ID=GCA000560365_01954;Name=thioredoxin-dependent thiol peroxidase;locus_tag=GCA000560365_01954;product=thioredoxin-dependent thiol peroxidase;Dbxref=GO:0016209,GO:0016491;gene=bcp;Parent=GCA000560365_01954_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1225,COG:O,RefSeq:WP_000939521.1,SO:0001217,UniParc:UPI00000544FC,UniRef:UniRef100_Q2G280,UniRef:UniRef50_Q5HN72,UniRef:UniRef90_A0A2K4AJG8;ec_number=1.11.1.24
contig_1	Pyrodigal	gene	2010215	2011504	.	+	.	ID=GCA000560365_01955_gene;locus_tag=GCA000560365_01955;gene=hemL2
contig_1	Pyrodigal	CDS	2010215	2011504	.	+	0	ID=GCA000560365_01955;Name=glutamate-1-semialdehyde 2%2C1-aminomutase;locus_tag=GCA000560365_01955;product=glutamate-1-semialdehyde 2%2C1-aminomutase;Dbxref=GO:0005737,GO:0006782,GO:0008483,GO:0030170,GO:0033014,GO:0042286;gene=hemL2;Parent=GCA000560365_01955_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0001,COG:H,RefSeq:WP_001011598.1,SO:0001217,UniParc:UPI00000544FB,UniRef:UniRef100_Q2G283,UniRef:UniRef50_Q2G283,UniRef:UniRef90_Q2G283;ec_number=5.4.3.8
contig_1	Pyrodigal	gene	2011746	2012891	.	+	.	ID=GCA000560365_01956_gene;locus_tag=GCA000560365_01956;gene=ygaE
contig_1	Pyrodigal	CDS	2011746	2012891	.	+	0	ID=GCA000560365_01956;Name=Aromatic acid exporter family protein;locus_tag=GCA000560365_01956;product=Aromatic acid exporter family protein;gene=ygaE;Parent=GCA000560365_01956_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4129,COG:S,SO:0001217,UniParc:UPI00015FD73E,UniRef:UniRef100_Q2G2N1,UniRef:UniRef50_Q2G2N1,UniRef:UniRef90_Q2G2N1
contig_1	Pyrodigal	gene	2013082	2014818	.	-	.	ID=GCA000560365_01957_gene;locus_tag=GCA000560365_01957;gene=mdlB
contig_1	Pyrodigal	CDS	2013082	2014818	.	-	0	ID=GCA000560365_01957;Name=SAV1866 family putative multidrug efflux ABC transporter;locus_tag=GCA000560365_01957;product=SAV1866 family putative multidrug efflux ABC transporter;Dbxref=GO:0005524,GO:0005886,GO:0015421,GO:0016887;gene=mdlB;Parent=GCA000560365_01957_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000597238,COG:COG1132,COG:V,RefSeq:WP_000597238.1,SO:0001217,UniParc:UPI00000544F9,UniRef:UniRef100_Q2G2M9,UniRef:UniRef50_P71082,UniRef:UniRef90_Q2G2M9;ec_number=7.6.2.-
contig_1	Pyrodigal	gene	2015109	2015651	.	-	.	ID=GCA000560365_01958_gene;locus_tag=GCA000560365_01958;gene=ygaC
contig_1	Pyrodigal	CDS	2015109	2015651	.	-	0	ID=GCA000560365_01958;Name=Nucleoside triphosphate/diphosphate phosphatase;locus_tag=GCA000560365_01958;product=Nucleoside triphosphate/diphosphate phosphatase;Dbxref=GO:0000287,GO:0017110,GO:0017111;gene=ygaC;Parent=GCA000560365_01958_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3557,COG:S,KEGG:K07586,RefSeq:WP_000251253.1,SO:0001217,UniParc:UPI00000D7652,UniRef:UniRef100_Q2G2M8,UniRef:UniRef50_Q2G2M8,UniRef:UniRef90_Q2G2M8;ec_number=3.6.1.6
contig_1	Pyrodigal	gene	2015953	2016990	.	-	.	ID=GCA000560365_01959_gene;locus_tag=GCA000560365_01959;gene=mutY
contig_1	Pyrodigal	CDS	2015953	2016990	.	-	0	ID=GCA000560365_01959;Name=A/G-specific adenine glycosylase;locus_tag=GCA000560365_01959;product=A/G-specific adenine glycosylase;Dbxref=GO:0006284,GO:0019104;gene=mutY;Parent=GCA000560365_01959_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1194,COG:L,RefSeq:WP_000284752.1,SO:0001217,UniParc:UPI00000544F7,UniRef:UniRef100_Q2G2W0,UniRef:UniRef50_A0A7U7JQ99,UniRef:UniRef90_A0A0U1MPG3;ec_number=3.2.2.31
contig_1	Pyrodigal	gene	2017142	2018119	.	+	.	ID=GCA000560365_01960_gene;locus_tag=GCA000560365_01960;gene=ybcI
contig_1	Pyrodigal	CDS	2017142	2018119	.	+	0	ID=GCA000560365_01960;Name=Metal-dependent hydrolase;locus_tag=GCA000560365_01960;product=Metal-dependent hydrolase;gene=ybcI;Parent=GCA000560365_01960_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1988,COG:R,KEGG:K07038,RefSeq:WP_000379098.1,SO:0001217,UniParc:UPI00000544F6,UniRef:UniRef100_Q2G2V9,UniRef:UniRef50_Q2G2V9,UniRef:UniRef90_Q2G2V9
contig_1	Pyrodigal	gene	2018380	2019216	.	-	.	ID=GCA000560365_01961_gene;locus_tag=GCA000560365_01961;gene=tagG
contig_1	Pyrodigal	CDS	2018380	2019216	.	-	0	ID=GCA000560365_01961;Name=Teichoic acid translocation permease protein TagG;locus_tag=GCA000560365_01961;product=Teichoic acid translocation permease protein TagG;gene=tagG;Parent=GCA000560365_01961_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000886468.1,SO:0001217,UniParc:UPI00000544F5,UniRef:UniRef100_Q2G2V7,UniRef:UniRef50_Q2G2V7,UniRef:UniRef90_Q2G2V7
contig_1	Pyrodigal	gene	2019225	2020742	.	-	.	ID=GCA000560365_01962_gene;locus_tag=GCA000560365_01962;gene=tagH
contig_1	Pyrodigal	CDS	2019225	2020742	.	-	0	ID=GCA000560365_01962;Name=ABC transporter domain-containing protein;locus_tag=GCA000560365_01962;product=ABC transporter domain-containing protein;gene=tagH;Parent=GCA000560365_01962_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1134,COG:G,RefSeq:WP_000535834.1,SO:0001217,UniParc:UPI00000544F3,UniRef:UniRef100_Q2G2H3,UniRef:UniRef50_Q2G2H3,UniRef:UniRef90_Q2G2H3
contig_1	Pyrodigal	gene	2020757	2021071	.	-	.	ID=GCA000560365_01963_gene;locus_tag=GCA000560365_01963
contig_1	Pyrodigal	CDS	2020757	2021071	.	-	0	ID=GCA000560365_01963;Name=Transcriptional regulator;locus_tag=GCA000560365_01963;product=Transcriptional regulator;Parent=GCA000560365_01963_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000435806.1,SO:0001217,UniParc:UPI00000D778E,UniRef:UniRef100_Q2G2H0,UniRef:UniRef50_G5JJ30,UniRef:UniRef90_G5JJ30
contig_1	Pyrodigal	gene	2021049	2021867	.	-	.	ID=GCA000560365_01964_gene;locus_tag=GCA000560365_01964;gene=recX
contig_1	Pyrodigal	CDS	2021049	2021867	.	-	0	ID=GCA000560365_01964;Name=recombination regulator RecX;locus_tag=GCA000560365_01964;product=recombination regulator RecX;Dbxref=GO:0005737,GO:0006282;gene=recX;Parent=GCA000560365_01964_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2137,COG:O,RefSeq:WP_001124419.1,SO:0001217,UniParc:UPI0000133610,UniRef:UniRef100_Q2G2G9,UniRef:UniRef50_Q2G2G9,UniRef:UniRef90_Q2G2G9
contig_1	Pyrodigal	gene	2022128	2022937	.	-	.	ID=GCA000560365_01965_gene;locus_tag=GCA000560365_01965;gene=sgtB
contig_1	Pyrodigal	CDS	2022128	2022937	.	-	0	ID=GCA000560365_01965;Name=monofunctional peptidoglycan glycosyltransferase SgtB;locus_tag=GCA000560365_01965;product=monofunctional peptidoglycan glycosyltransferase SgtB;Dbxref=GO:0005886,GO:0008360,GO:0008955,GO:0009252,GO:0030288,GO:0071555;gene=sgtB;Parent=GCA000560365_01965_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000830377,COG:COG0744,COG:M,RefSeq:WP_000830380.1,SO:0001217,UniParc:UPI00000D7827,UniRef:UniRef100_Q93Q23,UniRef:UniRef50_Q93Q23,UniRef:UniRef90_Q93Q23;ec_number=2.4.99.28
contig_1	Pyrodigal	gene	2023278	2023793	.	-	.	ID=GCA000560365_01966_gene;locus_tag=GCA000560365_01966;gene=yajL
contig_1	Pyrodigal	CDS	2023278	2023793	.	-	0	ID=GCA000560365_01966;Name=putative protein SACOL1933;locus_tag=GCA000560365_01966;product=putative protein SACOL1933;gene=yajL;Parent=GCA000560365_01966_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0693,COG:V,RefSeq:WP_000163283.1,SO:0001217,UniParc:UPI0000052288,UniRef:UniRef100_P0A0K3,UniRef:UniRef50_P0A0K3,UniRef:UniRef90_P0A0K3
contig_1	Pyrodigal	gene	2023924	2024085	.	-	.	ID=GCA000560365_01967_gene;locus_tag=GCA000560365_01967
contig_1	Pyrodigal	CDS	2023924	2024085	.	-	0	ID=GCA000560365_01967;Name=Cytosolic protein;locus_tag=GCA000560365_01967;product=Cytosolic protein;Parent=GCA000560365_01967_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001005407.1,SO:0001217,UniParc:UPI00000544EF,UniRef:UniRef100_Q2G2H1,UniRef:UniRef50_A0A654BB04,UniRef:UniRef90_A0A654BB04
contig_1	Pyrodigal	gene	2024309	2025460	.	+	.	ID=GCA000560365_01968_gene;locus_tag=GCA000560365_01968;gene=yfkAB
contig_1	Pyrodigal	CDS	2024309	2025460	.	+	0	ID=GCA000560365_01968;Name=radical SAM/CxCxxxxC motif protein YfkAB;locus_tag=GCA000560365_01968;product=radical SAM/CxCxxxxC motif protein YfkAB;Dbxref=GO:0008152,GO:0051539,GO:1904047;gene=yfkAB;Parent=GCA000560365_01968_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0535,COG:DH,RefSeq:WP_001089613.1,SO:0001217,UniParc:UPI00004B5C55,UniRef:UniRef100_A0A0D6HBX1,UniRef:UniRef50_B9E7Z7,UniRef:UniRef90_A0AA40JNB2
contig_1	Pyrodigal	gene	2025720	2026250	.	-	.	ID=GCA000560365_01969_gene;locus_tag=GCA000560365_01969;gene=yciA
contig_1	Pyrodigal	CDS	2025720	2026250	.	-	0	ID=GCA000560365_01969;Name=HotDog ACOT-type domain-containing protein;locus_tag=GCA000560365_01969;product=HotDog ACOT-type domain-containing protein;gene=yciA;Parent=GCA000560365_01969_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1607,COG:I,RefSeq:WP_000184383.1,SO:0001217,UniParc:UPI00000D7727,UniRef:UniRef100_Q2FX15,UniRef:UniRef50_A0A654BBY2,UniRef:UniRef90_Q2FX15
contig_1	Pyrodigal	gene	2026340	2027587	.	-	.	ID=GCA000560365_01970_gene;locus_tag=GCA000560365_01970;gene=ampS
contig_1	Pyrodigal	CDS	2026340	2027587	.	-	0	ID=GCA000560365_01970;Name=Aminopeptidase PepS;locus_tag=GCA000560365_01970;product=Aminopeptidase PepS;gene=ampS;Parent=GCA000560365_01970_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2309,COG:E,SO:0001217,UniParc:UPI0000696C7E,UniRef:UniRef100_A0A0D6HBV5,UniRef:UniRef50_A0A9N8IJS9,UniRef:UniRef90_A0A9N8IJS9
contig_1	Pyrodigal	gene	2027599	2027805	.	-	.	ID=GCA000560365_01971_gene;locus_tag=GCA000560365_01971;gene=yfkK
contig_1	Pyrodigal	CDS	2027599	2027805	.	-	0	ID=GCA000560365_01971;Name=UPF0435 protein SAHV_1865;locus_tag=GCA000560365_01971;product=UPF0435 protein SAHV_1865;gene=yfkK;Parent=GCA000560365_01971_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4840,COG:S,SO:0001217,UniParc:UPI00004B5C57,UniRef:UniRef100_Q2FX13,UniRef:UniRef50_Q2FX13,UniRef:UniRef90_Q2FX13
contig_1	Pyrodigal	gene	2027946	2028410	.	+	.	ID=GCA000560365_01972_gene;locus_tag=GCA000560365_01972;gene=ptpA
contig_1	Pyrodigal	CDS	2027946	2028410	.	+	0	ID=GCA000560365_01972;Name=Low molecular weight protein-tyrosine-phosphatase PtpA;locus_tag=GCA000560365_01972;product=Low molecular weight protein-tyrosine-phosphatase PtpA;Dbxref=GO:0004726,GO:0005576,GO:0030946,GO:0140793;gene=ptpA;Parent=GCA000560365_01972_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0394,COG:T,RefSeq:WP_000228666.1,SO:0001217,UniParc:UPI000005449F,UniRef:UniRef100_Q2FX12,UniRef:UniRef50_Q2FX12,UniRef:UniRef90_Q2FX12;ec_number=3.1.3.48
contig_1	Pyrodigal	gene	2028417	2028692	.	+	.	ID=GCA000560365_01973_gene;locus_tag=GCA000560365_01973;gene=ytxH
contig_1	Pyrodigal	CDS	2028417	2028692	.	+	0	ID=GCA000560365_01973;Name=YtxH domain-containing protein;locus_tag=GCA000560365_01973;product=YtxH domain-containing protein;gene=ytxH;Parent=GCA000560365_01973_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000428172.1,SO:0001217,UniParc:UPI000005449E,UniRef:UniRef100_Q2FX11,UniRef:UniRef50_A0A2K3ZIL3,UniRef:UniRef90_Q2FX11
contig_1	Pyrodigal	gene	2028970	2030187	.	+	.	ID=GCA000560365_01974_gene;locus_tag=GCA000560365_01974;gene=brkB
contig_1	Pyrodigal	CDS	2028970	2030187	.	+	0	ID=GCA000560365_01974;Name=Ribonuclease BN;locus_tag=GCA000560365_01974;product=Ribonuclease BN;gene=brkB;Parent=GCA000560365_01974_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1295,COG:S,RefSeq:WP_000037075.1,SO:0001217,UniParc:UPI00000C7F85,UniRef:UniRef100_Q2FX10,UniRef:UniRef50_A0A077UL04,UniRef:UniRef90_A0A077UL04
contig_1	Pyrodigal	gene	2030303	2030932	.	-	.	ID=GCA000560365_01975_gene;locus_tag=GCA000560365_01975;gene=vraR
contig_1	Pyrodigal	CDS	2030303	2030932	.	-	0	ID=GCA000560365_01975;Name=two-component system response regulator VraR;locus_tag=GCA000560365_01975;product=two-component system response regulator VraR;Dbxref=GO:0000160,GO:0003677,GO:0005737,GO:0006355;gene=vraR;Parent=GCA000560365_01975_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000153530,COG:COG2197,COG:TK,KEGG:K07694,RefSeq:WP_000153530.1,SO:0001217,UniParc:UPI000005449C,UniRef:UniRef100_Q2FX09,UniRef:UniRef50_Q7A2Q1,UniRef:UniRef90_Q7A2Q1
contig_1	Pyrodigal	gene	2030922	2031965	.	-	.	ID=GCA000560365_01976_gene;locus_tag=GCA000560365_01976;gene=vraS
contig_1	Pyrodigal	CDS	2030922	2031965	.	-	0	ID=GCA000560365_01976;Name=Sensor protein VraS;locus_tag=GCA000560365_01976;product=Sensor protein VraS;Dbxref=GO:0000155,GO:0005524,GO:0005886,GO:0046983;gene=vraS;Parent=GCA000560365_01976_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4585,COG:T,KEGG:K07681,RefSeq:WP_001017131.1,SO:0001217,UniParc:UPI000005449B,UniRef:UniRef100_Q5HEN9,UniRef:UniRef50_Q7A2Q0,UniRef:UniRef90_Q7A2Q0;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	2031962	2032663	.	-	.	ID=GCA000560365_01977_gene;locus_tag=GCA000560365_01977;gene=liaF
contig_1	Pyrodigal	CDS	2031962	2032663	.	-	0	ID=GCA000560365_01977;Name=Cell wall-active antibiotics response LiaF-like C-terminal domain-containing protein;locus_tag=GCA000560365_01977;product=Cell wall-active antibiotics response LiaF-like C-terminal domain-containing protein;gene=liaF;Parent=GCA000560365_01977_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4758,COG:T,KEGG:K11622,RefSeq:WP_000149064.1,SO:0001217,UniParc:UPI000005449A,UniRef:UniRef100_Q2FX07,UniRef:UniRef50_Q2FX07,UniRef:UniRef90_Q2FX07
contig_1	Pyrodigal	gene	2032678	2033064	.	-	.	ID=GCA000560365_01978_gene;locus_tag=GCA000560365_01978
contig_1	Pyrodigal	CDS	2032678	2033064	.	-	0	ID=GCA000560365_01978;Name=Staphylococcal protein;locus_tag=GCA000560365_01978;product=Staphylococcal protein;Parent=GCA000560365_01978_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001110179.1,SO:0001217,UniParc:UPI00000D76F0,UniRef:UniRef100_Q2FX06,UniRef:UniRef50_G5JJT9,UniRef:UniRef90_Q2FX06
contig_1	Pyrodigal	gene	2033281	2034039	.	-	.	ID=GCA000560365_01979_gene;locus_tag=GCA000560365_01979;gene=map
contig_1	Pyrodigal	CDS	2033281	2034039	.	-	0	ID=GCA000560365_01979;Name=type I methionyl aminopeptidase;locus_tag=GCA000560365_01979;product=type I methionyl aminopeptidase;Dbxref=GO:0004239,GO:0006508,GO:0046872,GO:0070006;gene=map;Parent=GCA000560365_01979_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0024,COG:J,RefSeq:WP_000636142.1,SO:0001217,UniParc:UPI0000054498,UniRef:UniRef100_Q5HEN6,UniRef:UniRef50_Q8CRU9,UniRef:UniRef90_Q5HEN6;ec_number=3.4.11.18
contig_1	Infernal	gene	2034170	2034437	.	+	.	ID=GCA000560365_01980_gene;locus_tag=GCA000560365_01980;gene=S35
contig_1	Infernal	ncRNA	2034170	2034437	5.7e-15	+	.	ID=GCA000560365_01980;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000560365_01980;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000560365_01980_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	2034567	2035553	.	+	.	ID=GCA000560365_01981_gene;locus_tag=GCA000560365_01981;gene=ygaE
contig_1	Pyrodigal	CDS	2034567	2035553	.	+	0	ID=GCA000560365_01981;Name=UPF0421 protein SACOL1947;locus_tag=GCA000560365_01981;product=UPF0421 protein SACOL1947;Dbxref=GO:0005886;gene=ygaE;Parent=GCA000560365_01981_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4129,COG:S,RefSeq:WP_000999713.1,SO:0001217,UniParc:UPI0000054495,UniRef:UniRef100_Q2FX03,UniRef:UniRef50_Q2FX03,UniRef:UniRef90_Q2FX03
contig_1	Infernal	gene	2035566	2035897	.	+	.	ID=GCA000560365_01982_gene;locus_tag=GCA000560365_01982;gene=S35
contig_1	Infernal	ncRNA	2035566	2035897	3e-29	+	.	ID=GCA000560365_01982;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000560365_01982;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000560365_01982_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	2036043	2036456	.	-	.	ID=GCA000560365_01983_gene;locus_tag=GCA000560365_01983
contig_1	Pyrodigal	CDS	2036043	2036456	.	-	0	ID=GCA000560365_01983;Name=Cytosolic protein;locus_tag=GCA000560365_01983;product=Cytosolic protein;Parent=GCA000560365_01983_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001549145.1,SO:0001217,UniParc:UPI00004B5C59,UniRef:UniRef100_Q2FX02,UniRef:UniRef50_Q2FX02,UniRef:UniRef90_Q2FX02
contig_1	Pyrodigal	gene	2036681	2037412	.	-	.	ID=GCA000560365_01984_gene;locus_tag=GCA000560365_01984;gene=gatD
contig_1	Pyrodigal	CDS	2036681	2037412	.	-	0	ID=GCA000560365_01984;Name=Lipid II isoglutaminyl synthase (glutamine-hydrolyzing) subunit GatD;locus_tag=GCA000560365_01984;product=Lipid II isoglutaminyl synthase (glutamine-hydrolyzing) subunit GatD;Dbxref=GO:0004359,GO:0008360,GO:0009236,GO:0009252,GO:0071555,GO:0140282;gene=gatD;Parent=GCA000560365_01984_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3442,COG:R,KEGG:K07009,RefSeq:WP_000544969.1,SO:0001217,UniParc:UPI00000D77A4,UniRef:UniRef100_A0A0H2WZ38,UniRef:UniRef50_A0A0H2WZ38,UniRef:UniRef90_A0A0H2WZ38;ec_number=6.3.5.13
contig_1	Pyrodigal	gene	2037414	2038727	.	-	.	ID=GCA000560365_01985_gene;locus_tag=GCA000560365_01985;gene=murT
contig_1	Pyrodigal	CDS	2037414	2038727	.	-	0	ID=GCA000560365_01985;Name=lipid II isoglutaminyl synthase subunit MurT;locus_tag=GCA000560365_01985;product=lipid II isoglutaminyl synthase subunit MurT;Dbxref=GO:0005524,GO:0008270,GO:0008360,GO:0009252,GO:0016881,GO:0071555,GO:0140282;gene=murT;Parent=GCA000560365_01985_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001250336,COG:COG0769,COG:M,KEGG:K23393,RefSeq:WP_001250336.1,SO:0001217,UniParc:UPI00004B5C5B,UniRef:UniRef100_A0A0H2WZQ7,UniRef:UniRef50_A0A0H3JUU7,UniRef:UniRef90_A0A0H3JUU7;ec_number=6.3.5.13
contig_1	Pyrodigal	gene	2039019	2039519	.	+	.	ID=GCA000560365_01986_gene;locus_tag=GCA000560365_01986;gene=ftnA
contig_1	Pyrodigal	CDS	2039019	2039519	.	+	0	ID=GCA000560365_01986;Name=H-type ferritin FtnA;locus_tag=GCA000560365_01986;product=H-type ferritin FtnA;Dbxref=GO:0004322,GO:0005829,GO:0006826,GO:0006880,GO:0008198,GO:0008199;gene=ftnA;Parent=GCA000560365_01986_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000949467,COG:COG1528,COG:P,RefSeq:WP_000949467.1,SO:0001217,UniParc:UPI0000054490,UniRef:UniRef100_Q2FWZ8,UniRef:UniRef50_Q2FWZ8,UniRef:UniRef90_Q2FWZ8;ec_number=1.16.3.2
contig_1	Pyrodigal	gene	2039908	2040462	.	+	.	ID=GCA000560365_01987_gene;locus_tag=GCA000560365_01987;gene=dnaQ
contig_1	Pyrodigal	CDS	2039908	2040462	.	+	0	ID=GCA000560365_01987;Name=DNA polymerase III polC-type;locus_tag=GCA000560365_01987;product=DNA polymerase III polC-type;gene=dnaQ;Parent=GCA000560365_01987_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0847,COG:L,RefSeq:WP_000613733.1,SO:0001217,UniParc:UPI000005448E,UniRef:UniRef100_Q2FWZ6,UniRef:UniRef50_Q4L7K7,UniRef:UniRef90_A0A2I7Y430
contig_1	Pyrodigal	gene	2040530	2041600	.	-	.	ID=GCA000560365_01988_gene;locus_tag=GCA000560365_01988;gene=dinB
contig_1	Pyrodigal	CDS	2040530	2041600	.	-	0	ID=GCA000560365_01988;Name=DNA polymerase IV;locus_tag=GCA000560365_01988;product=DNA polymerase IV;Dbxref=GO:0000287,GO:0003684,GO:0003887,GO:0005829,GO:0006261,GO:0006281,GO:0009432,GO:0042276;gene=dinB;Parent=GCA000560365_01988_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0389,COG:L,RefSeq:WP_000140176.1,SO:0001217,UniParc:UPI00001297A1,UniRef:UniRef100_Q5HEM7,UniRef:UniRef50_Q49YT9,UniRef:UniRef90_P63991;ec_number=2.7.7.7
contig_1	Pyrodigal	gene	2041847	2042377	.	-	.	ID=GCA000560365_01989_gene;locus_tag=GCA000560365_01989
contig_1	Pyrodigal	CDS	2041847	2042377	.	-	0	ID=GCA000560365_01989;Name=Permease;locus_tag=GCA000560365_01989;product=Permease;Parent=GCA000560365_01989_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000548781.1,SO:0001217,UniParc:UPI00000CAC36,UniRef:UniRef100_Q2FWZ4,UniRef:UniRef50_Q2FWZ4,UniRef:UniRef90_Q2FWZ4
contig_1	Pyrodigal	gene	2042547	2043908	.	-	.	ID=GCA000560365_01990_gene;locus_tag=GCA000560365_01990;gene=rlmD
contig_1	Pyrodigal	CDS	2042547	2043908	.	-	0	ID=GCA000560365_01990;Name=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;locus_tag=GCA000560365_01990;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;Dbxref=GO:0008649,GO:0046872,GO:0051539,GO:0070041,GO:0070475;gene=rlmD;Parent=GCA000560365_01990_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2265,COG:J,KEGG:K03215,RefSeq:WP_001147868.1,SO:0001217,UniParc:UPI00004B5C5C,UniRef:UniRef100_Q5HEM5,UniRef:UniRef50_Q8CRU6,UniRef:UniRef90_Q7A4Q9;ec_number=2.1.1.190
contig_1	Pyrodigal	gene	2043989	2044936	.	-	.	ID=GCA000560365_01991_gene;locus_tag=GCA000560365_01991;gene=dagK
contig_1	Pyrodigal	CDS	2043989	2044936	.	-	0	ID=GCA000560365_01991;Name=diacylglycerol kinase;locus_tag=GCA000560365_01991;product=diacylglycerol kinase;Dbxref=GO:0003951,GO:0004143,GO:0005524,GO:0005886,GO:0008654,GO:0046872;gene=dagK;Parent=GCA000560365_01991_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1597,COG:IR,RefSeq:WP_001231451.1,SO:0001217,UniParc:UPI0000054489,UniRef:UniRef100_Q2FWZ2,UniRef:UniRef50_Q6GFF9,UniRef:UniRef90_Q6GFF9;ec_number=2.7.1.107
contig_1	Infernal	gene	2044981	2045302	.	+	.	ID=GCA000560365_01992_gene;locus_tag=GCA000560365_01992;gene=S35
contig_1	Infernal	ncRNA	2044981	2045302	6e-19	+	.	ID=GCA000560365_01992;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000560365_01992;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000560365_01992_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	2045705	2047132	.	-	.	ID=GCA000560365_01993_gene;locus_tag=GCA000560365_01993;gene=gatB
contig_1	Pyrodigal	CDS	2045705	2047132	.	-	0	ID=GCA000560365_01993;Name=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;locus_tag=GCA000560365_01993;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;Dbxref=GO:0005524,GO:0006412,GO:0016884,GO:0050566,GO:0050567,GO:0070681;gene=gatB;Parent=GCA000560365_01993_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0064,COG:J,KEGG:K02434,RefSeq:WP_000545370.1,SO:0001217,UniParc:UPI000012B162,UniRef:UniRef100_Q2FWZ0,UniRef:UniRef50_Q45486,UniRef:UniRef90_Q45486;ec_number=6.3.5.-
contig_1	Pyrodigal	gene	2047145	2048602	.	-	.	ID=GCA000560365_01994_gene;locus_tag=GCA000560365_01994;gene=gatA
contig_1	Pyrodigal	CDS	2047145	2048602	.	-	0	ID=GCA000560365_01994;Name=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA;locus_tag=GCA000560365_01994;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA;Dbxref=GO:0005524,GO:0006412,GO:0006424,GO:0030956,GO:0050567;gene=gatA;Parent=GCA000560365_01994_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0154,COG:J,KEGG:K02433,RefSeq:WP_000027928.1,SO:0001217,UniParc:UPI00003D0D85,UniRef:UniRef100_Q2FWY9,UniRef:UniRef50_O06491,UniRef:UniRef90_P63488;ec_number=6.3.5.7
contig_1	Pyrodigal	gene	2048604	2048906	.	-	.	ID=GCA000560365_01995_gene;locus_tag=GCA000560365_01995;gene=gatC
contig_1	Pyrodigal	CDS	2048604	2048906	.	-	0	ID=GCA000560365_01995;Name=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;locus_tag=GCA000560365_01995;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;Dbxref=GO:0005524,GO:0006412,GO:0006424,GO:0006450,GO:0030956,GO:0050566,GO:0050567,GO:0070681;gene=gatC;Parent=GCA000560365_01995_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0721,COG:J,RefSeq:WP_000170162.1,SO:0001217,UniParc:UPI0000054485,UniRef:UniRef100_Q2FWY8,UniRef:UniRef50_Q2FWY8,UniRef:UniRef90_Q2FWY8;ec_number=6.3.5.-
contig_1	Pyrodigal	gene	2049273	2050811	.	+	.	ID=GCA000560365_01996_gene;locus_tag=GCA000560365_01996;gene=putP
contig_1	Pyrodigal	CDS	2049273	2050811	.	+	0	ID=GCA000560365_01996;Name=sodium/proline symporter PutP;locus_tag=GCA000560365_01996;product=sodium/proline symporter PutP;Dbxref=GO:0005298,GO:0005886,GO:0006814,GO:0015193,GO:0015824,GO:0016020,GO:0031402;gene=putP;Parent=GCA000560365_01996_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0591,COG:E,RefSeq:WP_000957015.1,SO:0001217,UniParc:UPI0000696C81,UniRef:UniRef100_Q2FFJ3,UniRef:UniRef50_Q2FWY7,UniRef:UniRef90_Q2FWY7
contig_1	Pyrodigal	gene	2050900	2052099	.	-	.	ID=GCA000560365_01997_gene;locus_tag=GCA000560365_01997;gene=camS
contig_1	Pyrodigal	CDS	2050900	2052099	.	-	0	ID=GCA000560365_01997;Name=CamS family sex pheromone protein;locus_tag=GCA000560365_01997;product=CamS family sex pheromone protein;gene=camS;Parent=GCA000560365_01997_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4851,COG:R,RefSeq:WP_000831698.1,SO:0001217,UniParc:UPI00004B5C5D,UniRef:UniRef100_Q2FWY6,UniRef:UniRef50_Q2FWY6,UniRef:UniRef90_Q2FWY6
contig_1	Pyrodigal	gene	2052112	2054115	.	-	.	ID=GCA000560365_01998_gene;locus_tag=GCA000560365_01998;gene=ligA
contig_1	Pyrodigal	CDS	2052112	2054115	.	-	0	ID=GCA000560365_01998;Name=NAD-dependent DNA ligase LigA;locus_tag=GCA000560365_01998;product=NAD-dependent DNA ligase LigA;Dbxref=GO:0003677,GO:0003911,GO:0005829,GO:0006260,GO:0006281,GO:0006288,GO:0046872;gene=ligA;Parent=GCA000560365_01998_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0272,COG:L,RefSeq:WP_000774565.1,SO:0001217,UniParc:UPI00000D789E,UniRef:UniRef100_Q2G1Y0,UniRef:UniRef50_Q837V6,UniRef:UniRef90_Q99SY3;ec_number=6.5.1.2
contig_1	Pyrodigal	gene	2054119	2056311	.	-	.	ID=GCA000560365_01999_gene;locus_tag=GCA000560365_01999;gene=pcrA
contig_1	Pyrodigal	CDS	2054119	2056311	.	-	0	ID=GCA000560365_01999;Name=DNA helicase PcrA;locus_tag=GCA000560365_01999;product=DNA helicase PcrA;Dbxref=GO:0000725,GO:0003677,GO:0003678,GO:0003689,GO:0005524,GO:0005737,GO:0005829,GO:0006268,GO:0006281,GO:0009378,GO:0016853,GO:0016887,GO:0033202,GO:0036121,GO:0061749,GO:0061775,GO:0140584,GO:0140665,GO:0140849,GO:1990518;gene=pcrA;Parent=GCA000560365_01999_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0210,COG:L,RefSeq:WP_000992921.1,SO:0001217,UniParc:UPI0000054480,UniRef:UniRef100_Q53727,UniRef:UniRef50_Q53727,UniRef:UniRef90_Q53727;ec_number=5.6.2.4
contig_1	Pyrodigal	gene	2056308	2057000	.	-	.	ID=GCA000560365_02000_gene;locus_tag=GCA000560365_02000;gene=pcrB
contig_1	Pyrodigal	CDS	2056308	2057000	.	-	0	ID=GCA000560365_02000;Name=heptaprenylglyceryl phosphate synthase;locus_tag=GCA000560365_02000;product=heptaprenylglyceryl phosphate synthase;Dbxref=GO:0000287,GO:0002094,GO:0046474;gene=pcrB;Parent=GCA000560365_02000_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1646,COG:I,RefSeq:WP_000272069.1,SO:0001217,UniParc:UPI0000696C82,UniRef:UniRef100_Q2FFI9,UniRef:UniRef50_Q53726,UniRef:UniRef90_Q53726;ec_number=2.5.1.n9
contig_1	Pyrodigal	gene	2057172	2057474	.	-	.	ID=GCA000560365_02001_gene;locus_tag=GCA000560365_02001;gene=yerC
contig_1	Pyrodigal	CDS	2057172	2057474	.	-	0	ID=GCA000560365_02001;Name=His repressor;locus_tag=GCA000560365_02001;product=His repressor;gene=yerC;Parent=GCA000560365_02001_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4496,COG:R,RefSeq:WP_001165363.1,SO:0001217,UniParc:UPI000005447E,UniRef:UniRef100_Q2G1Y1,UniRef:UniRef50_Q7BVT7,UniRef:UniRef90_Q2G1Y1
contig_1	Pyrodigal	gene	2057583	2058878	.	-	.	ID=GCA000560365_02002_gene;locus_tag=GCA000560365_02002;gene=purB
contig_1	Pyrodigal	CDS	2057583	2058878	.	-	0	ID=GCA000560365_02002;Name=adenylosuccinate lyase;locus_tag=GCA000560365_02002;product=adenylosuccinate lyase;Dbxref=GO:0004018,GO:0005829,GO:0006189,GO:0009152,GO:0044208,GO:0070626;gene=purB;Parent=GCA000560365_02002_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0015,COG:F,KEGG:K01756,RefSeq:WP_000572878.1,SO:0001217,UniParc:UPI00000D76FE,UniRef:UniRef100_Q2G2S0,UniRef:UniRef50_Q2G2S0,UniRef:UniRef90_Q2G2S0;ec_number=4.3.2.2
contig_1	Pyrodigal	gene	2059739	2060905	.	+	.	ID=GCA000560365_02003_gene;locus_tag=GCA000560365_02003;gene=scpA
contig_1	Pyrodigal	CDS	2059739	2060905	.	+	0	ID=GCA000560365_02003;Name=cysteine protease staphopain A;locus_tag=GCA000560365_02003;product=cysteine protease staphopain A;Dbxref=GO:0005576,GO:0006508,GO:0008234;gene=scpA;Parent=GCA000560365_02003_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000827761,RefSeq:WP_000827748.1,SO:0001217,UniParc:UPI000005447C,UniRef:UniRef100_Q2G2R8,UniRef:UniRef50_P81297,UniRef:UniRef90_P81297;ec_number=3.4.22.48
contig_1	Pyrodigal	gene	2060936	2061262	.	+	.	ID=GCA000560365_02004_gene;locus_tag=GCA000560365_02004
contig_1	Pyrodigal	CDS	2060936	2061262	.	+	0	ID=GCA000560365_02004;Name=Staphostatin A domain-containing protein;locus_tag=GCA000560365_02004;product=Staphostatin A domain-containing protein;Parent=GCA000560365_02004_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000434933.1,SO:0001217,UniParc:UPI00000CAAE0,UniRef:UniRef100_Q2G2R7,UniRef:UniRef50_Q2G2R7,UniRef:UniRef90_Q2G2R7
contig_1	Pyrodigal	gene	2061554	2061727	.	-	.	ID=GCA000560365_02005_gene;locus_tag=GCA000560365_02005
contig_1	Pyrodigal	CDS	2061554	2061727	.	-	0	ID=GCA000560365_02005;Name=NETI motif-containing protein;locus_tag=GCA000560365_02005;product=NETI motif-containing protein;Parent=GCA000560365_02005_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000669862.1,SO:0001217,UniParc:UPI000005447A,UniRef:UniRef100_Q2G2R6,UniRef:UniRef50_A0A0B5APK8,UniRef:UniRef90_Q2G2R6
contig_1	Pyrodigal	gene	2061708	2062310	.	-	.	ID=GCA000560365_02006_gene;locus_tag=GCA000560365_02006;gene=yebE
contig_1	Pyrodigal	CDS	2061708	2062310	.	-	0	ID=GCA000560365_02006;Name=UPF0316 protein SA1727;locus_tag=GCA000560365_02006;product=UPF0316 protein SA1727;Dbxref=GO:0005886;gene=yebE;Parent=GCA000560365_02006_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4843,COG:S,RefSeq:WP_000011538.1,SO:0001217,UniParc:UPI0000696C83,UniRef:UniRef100_Q2FFI4,UniRef:UniRef50_Q2G2R9,UniRef:UniRef90_Q2G2R9
contig_1	Pyrodigal	gene	2062581	2063402	.	-	.	ID=GCA000560365_02007_gene;locus_tag=GCA000560365_02007;gene=nadE
contig_1	Pyrodigal	CDS	2062581	2063402	.	-	0	ID=GCA000560365_02007;Name=nicotinate phosphoribosyltransferase;locus_tag=GCA000560365_02007;product=nicotinate phosphoribosyltransferase;Dbxref=GO:0003952,GO:0004359,GO:0004516,GO:0005524,GO:0005737,GO:0008795,GO:0009435,GO:0046872;gene=nadE;Parent=GCA000560365_02007_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00763,RefSeq:WP_000040873.1,SO:0001217,UniParc:UPI00004B5C5F,UniRef:UniRef100_Q2G236,UniRef:UniRef50_Q2G236,UniRef:UniRef90_Q2G236;ec_number=6.3.4.21
contig_1	Pyrodigal	gene	2063395	2064864	.	-	.	ID=GCA000560365_02008_gene;locus_tag=GCA000560365_02008;gene=pncB
contig_1	Pyrodigal	CDS	2063395	2064864	.	-	0	ID=GCA000560365_02008;Name=nicotinate phosphoribosyltransferase;locus_tag=GCA000560365_02008;product=nicotinate phosphoribosyltransferase;Dbxref=GO:0004516,GO:0009435;gene=pncB;Parent=GCA000560365_02008_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1488,COG:H,KEGG:K00763,RefSeq:WP_000284431.1,SO:0001217,UniParc:UPI00003B1B09,UniRef:UniRef100_A0A0D3Q8S4,UniRef:UniRef50_O32090,UniRef:UniRef90_A0A3A5LU92;ec_number=6.3.4.21
contig_1	Pyrodigal	gene	2065048	2066124	.	+	.	ID=GCA000560365_02009_gene;locus_tag=GCA000560365_02009;gene=nos
contig_1	Pyrodigal	CDS	2065048	2066124	.	+	0	ID=GCA000560365_02009;Name=Nitric oxide synthase oxygenase;locus_tag=GCA000560365_02009;product=Nitric oxide synthase oxygenase;Dbxref=GO:0004517,GO:0006809,GO:0020037,GO:0046872;gene=nos;Parent=GCA000560365_02009_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4362,COG:P,RefSeq:WP_000897635.1,SO:0001217,UniParc:UPI00000D76C2,UniRef:UniRef100_Q5HEK7,UniRef:UniRef50_Q6GFE2,UniRef:UniRef90_Q6GFE2;ec_number=1.14.14.47
contig_1	Pyrodigal	gene	2066144	2066938	.	+	.	ID=GCA000560365_02010_gene;locus_tag=GCA000560365_02010;gene=pheA2
contig_1	Pyrodigal	CDS	2066144	2066938	.	+	0	ID=GCA000560365_02010;Name=prephenate dehydratase;locus_tag=GCA000560365_02010;product=prephenate dehydratase;gene=pheA2;Parent=GCA000560365_02010_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0077,COG:E,RefSeq:WP_001177817.1,SO:0001217,UniParc:UPI00004B5C60,UniRef:UniRef100_A0A0E7Y8C1,UniRef:UniRef50_A0A0E7Y8C1,UniRef:UniRef90_A0A0E7Y8C1
contig_1	Pyrodigal	gene	2067128	2068690	.	-	.	ID=GCA000560365_02011_gene;locus_tag=GCA000560365_02011;gene=sdcS
contig_1	Pyrodigal	CDS	2067128	2068690	.	-	0	ID=GCA000560365_02011;Name=Sodium-dependent dicarboxylate transporter SdcS;locus_tag=GCA000560365_02011;product=Sodium-dependent dicarboxylate transporter SdcS;Dbxref=GO:0005886,GO:0006814,GO:0015293;gene=sdcS;Parent=GCA000560365_02011_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0471,COG:G,RefSeq:WP_000323167.1,SO:0001217,UniParc:UPI0000696C84,UniRef:UniRef100_Q2FFH9,UniRef:UniRef50_Q2FWY4,UniRef:UniRef90_Q2FWY4
contig_1	Pyrodigal	gene	2068895	2069992	.	-	.	ID=GCA000560365_02012_gene;locus_tag=GCA000560365_02012
contig_1	Pyrodigal	CDS	2068895	2069992	.	-	0	ID=GCA000560365_02012;Name=Cell wall surface anchor family protein;locus_tag=GCA000560365_02012;product=Cell wall surface anchor family protein;Parent=GCA000560365_02012_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000275730.1,SO:0001217,UniParc:UPI00004B5C62,UniRef:UniRef100_Q2FWY3,UniRef:UniRef50_A0A2U0IGB7,UniRef:UniRef90_A0A2U0IGB7
contig_1	Pyrodigal	gene	2070364	2070924	.	+	.	ID=GCA000560365_02013_gene;locus_tag=GCA000560365_02013;gene=pncA
contig_1	Pyrodigal	CDS	2070364	2070924	.	+	0	ID=GCA000560365_02013;Name=Nicotinamidase;locus_tag=GCA000560365_02013;product=Nicotinamidase;gene=pncA;Parent=GCA000560365_02013_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1335,COG:HR,RefSeq:WP_000149686.1,SO:0001217,UniParc:UPI0000054471,UniRef:UniRef100_Q2FWY2,UniRef:UniRef50_B9E842,UniRef:UniRef90_A0A077UMZ6
contig_1	Pyrodigal	gene	2070977	2071906	.	+	.	ID=GCA000560365_02014_gene;locus_tag=GCA000560365_02014;gene=ppaC
contig_1	Pyrodigal	CDS	2070977	2071906	.	+	0	ID=GCA000560365_02014;Name=manganese-dependent inorganic pyrophosphatase;locus_tag=GCA000560365_02014;product=manganese-dependent inorganic pyrophosphatase;Dbxref=GO:0004427,GO:0005737,GO:0030145;gene=ppaC;Parent=GCA000560365_02014_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1227,KEGG:K15986,RefSeq:WP_001140871.1,SO:0001217,UniParc:UPI0000131FDA,UniRef:UniRef100_Q2FWY1,UniRef:UniRef50_P37487,UniRef:UniRef90_Q2FWY1;ec_number=3.6.1.1
contig_1	Pyrodigal	gene	2072326	2073705	.	+	.	ID=GCA000560365_02015_gene;locus_tag=GCA000560365_02015;gene=aldH1
contig_1	Pyrodigal	CDS	2072326	2073705	.	+	0	ID=GCA000560365_02015;Name=4%2C4'-diaponeurosporen-aldehyde dehydrogenase;locus_tag=GCA000560365_02015;product=4%2C4'-diaponeurosporen-aldehyde dehydrogenase;Dbxref=GO:0004029,GO:0005737,GO:0006081,GO:0016117,GO:0016620;gene=aldH1;Parent=GCA000560365_02015_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1012,COG:I,RefSeq:WP_001021214.1,SO:0001217,UniParc:UPI000005446E,UniRef:UniRef100_Q2FWX9,UniRef:UniRef50_Q2FWX9,UniRef:UniRef90_Q2FWX9;ec_number=1.2.1.-
contig_1	Pyrodigal	gene	2073825	2074853	.	-	.	ID=GCA000560365_02016_gene;locus_tag=GCA000560365_02016;gene=pgl
contig_1	Pyrodigal	CDS	2073825	2074853	.	-	0	ID=GCA000560365_02016;Name=putative protein SAOUHSC_02143;locus_tag=GCA000560365_02016;product=putative protein SAOUHSC_02143;Dbxref=GO:0005829,GO:0017057;gene=pgl;Parent=GCA000560365_02016_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2706,COG:G,RefSeq:WP_000181322.1,SO:0001217,UniParc:UPI000005446D,UniRef:UniRef100_Q2FWX8,UniRef:UniRef50_Q2FWX8,UniRef:UniRef90_Q2FWX8
contig_1	Pyrodigal	gene	2075123	2075524	.	+	.	ID=GCA000560365_02017_gene;locus_tag=GCA000560365_02017
contig_1	Pyrodigal	CDS	2075123	2075524	.	+	0	ID=GCA000560365_02017;Name=YolD-like family protein;locus_tag=GCA000560365_02017;product=YolD-like family protein;Parent=GCA000560365_02017_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000205106.1,SO:0001217,UniParc:UPI000005446C,UniRef:UniRef100_Q2FWX7,UniRef:UniRef50_Q2FWX7,UniRef:UniRef90_Q2FWX7
contig_1	Infernal	gene	2075787	2076024	.	+	.	ID=GCA000560365_02018_gene;locus_tag=GCA000560365_02018;gene=tsr24
contig_1	Infernal	ncRNA	2075787	2076024	2.3e-40	+	.	ID=GCA000560365_02018;Name=S. aureus tsr24 small RNA;locus_tag=GCA000560365_02018;product=S. aureus tsr24 small RNA;Dbxref=RFAM:RF02577;Parent=GCA000560365_02018_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02577
contig_1	Pyrodigal	gene	2076097	2076270	.	-	.	ID=GCA000560365_02019_gene;locus_tag=GCA000560365_02019
contig_1	Pyrodigal	CDS	2076097	2076270	.	-	0	ID=GCA000560365_02019;Name=Phage protein;locus_tag=GCA000560365_02019;product=Phage protein;Parent=GCA000560365_02019_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000267034.1,SO:0001217,UniParc:UPI000005446B,UniRef:UniRef100_Q2FWX6,UniRef:UniRef50_Q2FWX6,UniRef:UniRef90_Q2FWX6
contig_1	Pyrodigal	gene	2076649	2077761	.	+	.	ID=GCA000560365_02020_gene;locus_tag=GCA000560365_02020
contig_1	Pyrodigal	CDS	2076649	2077761	.	+	0	ID=GCA000560365_02020;Name=Peptidase C45 hydrolase domain-containing protein;locus_tag=GCA000560365_02020;product=Peptidase C45 hydrolase domain-containing protein;Parent=GCA000560365_02020_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4927,COG:R,SO:0001217,UniParc:UPI000005446A,UniRef:UniRef100_Q2FWX5,UniRef:UniRef50_A0A380GLM7,UniRef:UniRef90_Q2FWX5
contig_1	Pyrodigal	gene	2077818	2078660	.	-	.	ID=GCA000560365_02021_gene;locus_tag=GCA000560365_02021
contig_1	Pyrodigal	CDS	2077818	2078660	.	-	0	ID=GCA000560365_02021;Name=DUF4097 domain-containing protein;locus_tag=GCA000560365_02021;product=DUF4097 domain-containing protein;Parent=GCA000560365_02021_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000713072.1,SO:0001217,UniParc:UPI0000054469,UniRef:UniRef100_Q2FWX4,UniRef:UniRef50_Q2FWX4,UniRef:UniRef90_Q2FWX4
contig_1	Pyrodigal	gene	2078657	2079214	.	-	.	ID=GCA000560365_02022_gene;locus_tag=GCA000560365_02022
contig_1	Pyrodigal	CDS	2078657	2079214	.	-	0	ID=GCA000560365_02022;Name=DUF1700 domain-containing protein;locus_tag=GCA000560365_02022;product=DUF1700 domain-containing protein;Parent=GCA000560365_02022_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4709,COG:S,RefSeq:WP_001033971.1,SO:0001217,UniParc:UPI00000D7831,UniRef:UniRef100_W8U4M8,UniRef:UniRef50_Q2FWX3,UniRef:UniRef90_Q2FWX3
contig_1	Pyrodigal	gene	2079274	2079798	.	-	.	ID=GCA000560365_02023_gene;locus_tag=GCA000560365_02023
contig_1	Pyrodigal	CDS	2079274	2079798	.	-	0	ID=GCA000560365_02023;Name=Lipoprotein;locus_tag=GCA000560365_02023;product=Lipoprotein;Parent=GCA000560365_02023_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000966288.1,SO:0001217,UniParc:UPI0000054467,UniRef:UniRef100_Q2FWX2,UniRef:UniRef50_G5JI25,UniRef:UniRef90_Q2FWX2
contig_1	Pyrodigal	gene	2079919	2080482	.	+	.	ID=GCA000560365_02024_gene;locus_tag=GCA000560365_02024
contig_1	Pyrodigal	CDS	2079919	2080482	.	+	0	ID=GCA000560365_02024;Name=Thioredoxin family protein;locus_tag=GCA000560365_02024;product=Thioredoxin family protein;Parent=GCA000560365_02024_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000182842.1,SO:0001217,UniParc:UPI00000D769F,UniRef:UniRef100_Q2FWX1,UniRef:UniRef50_Q2FWX1,UniRef:UniRef90_Q2FWX1
contig_1	Pyrodigal	gene	2080548	2081288	.	-	.	ID=GCA000560365_02025_gene;locus_tag=GCA000560365_02025;gene=pmtD
contig_1	Pyrodigal	CDS	2080548	2081288	.	-	0	ID=GCA000560365_02025;Name=phenol-soluble modulin export ABC transporter permease subunit PmtD;locus_tag=GCA000560365_02025;product=phenol-soluble modulin export ABC transporter permease subunit PmtD;gene=pmtD;Parent=GCA000560365_02025_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001221651,BlastRules:WP_001830379,RefSeq:WP_001221651.1,SO:0001217,UniParc:UPI0000054465,UniRef:UniRef100_Q2FWX0,UniRef:UniRef50_Q2FWX0,UniRef:UniRef90_Q2FWX0
contig_1	Pyrodigal	gene	2081288	2082160	.	-	.	ID=GCA000560365_02026_gene;locus_tag=GCA000560365_02026;gene=pmtC
contig_1	Pyrodigal	CDS	2081288	2082160	.	-	0	ID=GCA000560365_02026;Name=phenol-soluble modulin export ABC transporter ATP-binding protein PmtC;locus_tag=GCA000560365_02026;product=phenol-soluble modulin export ABC transporter ATP-binding protein PmtC;gene=pmtC;Parent=GCA000560365_02026_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000763048,BlastRules:WP_001830444,COG:COG1131,COG:JV,RefSeq:WP_000763048.1,SO:0001217,UniParc:UPI0000054464,UniRef:UniRef100_Q2FWW9,UniRef:UniRef50_S2XE79,UniRef:UniRef90_A0A390VQC9
contig_1	Pyrodigal	gene	2082157	2082837	.	-	.	ID=GCA000560365_02027_gene;locus_tag=GCA000560365_02027;gene=pmtB
contig_1	Pyrodigal	CDS	2082157	2082837	.	-	0	ID=GCA000560365_02027;Name=phenol-soluble modulin export ABC transporter permease subunit PmtB;locus_tag=GCA000560365_02027;product=phenol-soluble modulin export ABC transporter permease subunit PmtB;gene=pmtB;Parent=GCA000560365_02027_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000645727,BlastRules:WP_002494112,RefSeq:WP_000645727.1,SO:0001217,UniParc:UPI0000054463,UniRef:UniRef100_Q2FWW8,UniRef:UniRef50_Q2FWW8,UniRef:UniRef90_Q2FWW8
contig_1	Pyrodigal	gene	2082838	2083734	.	-	.	ID=GCA000560365_02028_gene;locus_tag=GCA000560365_02028;gene=pmtA
contig_1	Pyrodigal	CDS	2082838	2083734	.	-	0	ID=GCA000560365_02028;Name=phenol-soluble modulin export ABC transporter ATP-binding protein PmtA;locus_tag=GCA000560365_02028;product=phenol-soluble modulin export ABC transporter ATP-binding protein PmtA;gene=pmtA;Parent=GCA000560365_02028_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000991302,BlastRules:WP_001830432,COG:COG1131,COG:JV,RefSeq:WP_000991302.1,SO:0001217,UniParc:UPI0000054462,UniRef:UniRef100_Q2FWW7,UniRef:UniRef50_A0A380DUR2,UniRef:UniRef90_A0A380DUR2
contig_1	Pyrodigal	gene	2083731	2084111	.	-	.	ID=GCA000560365_02029_gene;locus_tag=GCA000560365_02029;gene=pmtR
contig_1	Pyrodigal	CDS	2083731	2084111	.	-	0	ID=GCA000560365_02029;Name=PSM export ABC transporter transcriptional regulator PmtR;locus_tag=GCA000560365_02029;product=PSM export ABC transporter transcriptional regulator PmtR;gene=pmtR;Parent=GCA000560365_02029_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1725,COG:K,KEGG:K07979,RefSeq:WP_000691584.1,SO:0001217,UniParc:UPI00000D785D,UniRef:UniRef100_Q2FWW6,UniRef:UniRef50_Q2FWW6,UniRef:UniRef90_Q2FWW6
contig_1	Pyrodigal	gene	2084375	2084551	.	-	.	ID=GCA000560365_02030_gene;locus_tag=GCA000560365_02030
contig_1	Pyrodigal	CDS	2084375	2084551	.	-	0	ID=GCA000560365_02030;Name=SE1626 family protein;locus_tag=GCA000560365_02030;product=SE1626 family protein;Parent=GCA000560365_02030_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000681968.1,SO:0001217,UniParc:UPI00000D76B9,UniRef:UniRef100_Q2FWW5,UniRef:UniRef50_A0A151A0Y9,UniRef:UniRef90_Q2FWW5
contig_1	Pyrodigal	gene	2085092	2086378	.	+	.	ID=GCA000560365_02031_gene;locus_tag=GCA000560365_02031;gene=aspB
contig_1	Pyrodigal	CDS	2085092	2086378	.	+	0	ID=GCA000560365_02031;Name=Aminotransferase class I/classII large domain-containing protein;locus_tag=GCA000560365_02031;product=Aminotransferase class I/classII large domain-containing protein;gene=aspB;Parent=GCA000560365_02031_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0436,COG:E,RefSeq:WP_001068542.1,SO:0001217,UniParc:UPI000005445D,UniRef:UniRef100_Q2FWW3,UniRef:UniRef50_A0A380FXV6,UniRef:UniRef90_Q2FWW3
contig_1	Pyrodigal	gene	2086702	2086992	.	-	.	ID=GCA000560365_02032_gene;locus_tag=GCA000560365_02032
contig_1	Pyrodigal	CDS	2086702	2086992	.	-	0	ID=GCA000560365_02032;Name=MAP domain-containing protein;locus_tag=GCA000560365_02032;product=MAP domain-containing protein;Parent=GCA000560365_02032_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000671712.1,SO:0001217,UniParc:UPI000069AB0B,UniRef:UniRef100_Q2FWW2,UniRef:UniRef50_Q2FWW2,UniRef:UniRef90_Q2FWW2
contig_1	Pyrodigal	gene	2087003	2088757	.	-	.	ID=GCA000560365_02033_gene;locus_tag=GCA000560365_02033
contig_1	Pyrodigal	CDS	2087003	2088757	.	-	0	ID=GCA000560365_02033;Name=65 kDa membrane protein;locus_tag=GCA000560365_02033;product=65 kDa membrane protein;Dbxref=GO:0005886;Parent=GCA000560365_02033_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K14204,RefSeq:WP_001549158.1,SO:0001217,UniParc:UPI000005445B,UniRef:UniRef100_A6QIG2,UniRef:UniRef50_Q53599,UniRef:UniRef90_A6QIG2
contig_1	Pyrodigal	gene	2089143	2089343	.	+	.	ID=GCA000560365_02034_gene;locus_tag=GCA000560365_02034
contig_1	Pyrodigal	CDS	2089143	2089343	.	+	0	ID=GCA000560365_02034;Name=Beta-hemolysin;locus_tag=GCA000560365_02034;product=Beta-hemolysin;Parent=GCA000560365_02034_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000D77C2,UniRef:UniRef100_A0A0H3K9G7,UniRef:UniRef50_A0A7U6XWR1,UniRef:UniRef90_A0A7U6XWR1
contig_1	Bakta	gene	2089820	2089894	.	+	.	ID=GCA000560365_02035_gene;locus_tag=GCA000560365_02035;inference=ab initio prediction:Bakta
contig_1	Bakta	CDS	2089820	2089894	.	+	0	ID=GCA000560365_02035;Name=Phage protein;locus_tag=GCA000560365_02035;product=Phage protein;Parent=GCA000560365_02035_gene;Note=SO:0001217,UniParc:UPI000865C40E,UniRef:UniRef100_A0A1C9ZYE6,UniRef:UniRef50_A0A0H5BLP8,UniRef:UniRef90_A0A0H5BLP8
contig_1	Pyrodigal	gene	2090518	2090868	.	-	.	ID=GCA000560365_02036_gene;locus_tag=GCA000560365_02036;gene=scn
contig_1	Pyrodigal	CDS	2090518	2090868	.	-	0	ID=GCA000560365_02036;Name=complement inhibitor SCIN-A;locus_tag=GCA000560365_02036;product=complement inhibitor SCIN-A;Dbxref=GO:0005576;gene=scn;Parent=GCA000560365_02036_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000702263,KEGG:K14199,NCBIProtein:ADL23798.1,RefSeq:WP_000702263.1,SO:0001217,UniParc:UPI00000D7752,UniRef:UniRef100_Q2FFF8,UniRef:UniRef50_Q2FWV6,UniRef:UniRef90_Q2FWV6
contig_1	Infernal	gene	2091027	2091168	.	-	.	ID=GCA000560365_02037_gene;locus_tag=GCA000560365_02037;gene=sprD
contig_1	Infernal	ncRNA	2091027	2091168	8.1e-26	-	.	ID=GCA000560365_02037;Name=Small pathogenicity island RNA D;locus_tag=GCA000560365_02037;gene=sprD;product=Small pathogenicity island RNA D;Dbxref=RFAM:RF01828;Parent=GCA000560365_02037_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01828
contig_1	Pyrodigal	gene	2091553	2092002	.	+	.	ID=GCA000560365_02038_gene;locus_tag=GCA000560365_02038;gene=chp
contig_1	Pyrodigal	CDS	2091553	2092002	.	+	0	ID=GCA000560365_02038;Name=chemotaxis-inhibiting protein CHIPS;locus_tag=GCA000560365_02038;product=chemotaxis-inhibiting protein CHIPS;Dbxref=GO:0005576;gene=chp;Parent=GCA000560365_02038_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000727649.1,SO:0001217,UniParc:UPI00001B580C,UniRef:UniRef100_Q2FFF7,UniRef:UniRef50_Q2FWV5,UniRef:UniRef90_Q2FWV5,VFDB:VFC0258,VFDB:VFG002422
contig_1	Pyrodigal	gene	2092097	2092393	.	-	.	ID=GCA000560365_02039_gene;locus_tag=GCA000560365_02039
contig_1	Pyrodigal	CDS	2092097	2092393	.	-	0	ID=GCA000560365_02039;Name=Peptidoglycan hydrolase%2C putative;locus_tag=GCA000560365_02039;product=Peptidoglycan hydrolase%2C putative;Parent=GCA000560365_02039_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001110822.1,SO:0001217,UniParc:UPI0000696C86,UniRef:UniRef100_Q2FWV4,UniRef:UniRef50_A0A345AR31,UniRef:UniRef90_Q2FWV4
contig_1	Infernal	gene	2092635	2092785	.	-	.	ID=GCA000560365_02040_gene;locus_tag=GCA000560365_02040;gene=sprX
contig_1	Infernal	ncRNA	2092635	2092785	1.6e-32	-	.	ID=GCA000560365_02040;Name=Small pathogenicity island RNA X;locus_tag=GCA000560365_02040;gene=sprX;product=Small pathogenicity island RNA X;Dbxref=RFAM:RF02672;Parent=GCA000560365_02040_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02672
contig_1	Pyrodigal	gene	2093082	2093573	.	-	.	ID=GCA000560365_02041_gene;locus_tag=GCA000560365_02041;gene=sak
contig_1	Pyrodigal	CDS	2093082	2093573	.	-	0	ID=GCA000560365_02041;Name=staphylokinase;locus_tag=GCA000560365_02041;product=staphylokinase;Dbxref=GO:0005576;gene=sak;Parent=GCA000560365_02041_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000920038,NCBIProtein:CAA24957.1,RefSeq:WP_000919350.1,SO:0001217,UniParc:UPI00000B6E0F,UniRef:UniRef100_Q6GFB2,UniRef:UniRef50_P15240,UniRef:UniRef90_P15240
contig_1	Pyrodigal	gene	2093764	2094519	.	-	.	ID=GCA000560365_02042_gene;locus_tag=GCA000560365_02042
contig_1	Pyrodigal	CDS	2093764	2094519	.	-	0	ID=GCA000560365_02042;Name=Autolysin;locus_tag=GCA000560365_02042;product=Autolysin;Parent=GCA000560365_02042_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000861038.1,SO:0001217,UniParc:UPI0000054453,UniRef:UniRef100_Q2FWV2,UniRef:UniRef50_A0A1W7ACD2,UniRef:UniRef90_A0A380E267
contig_1	Pyrodigal	gene	2094531	2094785	.	-	.	ID=GCA000560365_02043_gene;locus_tag=GCA000560365_02043
contig_1	Pyrodigal	CDS	2094531	2094785	.	-	0	ID=GCA000560365_02043;Name=phage holin;locus_tag=GCA000560365_02043;product=phage holin;Dbxref=GO:0140911;Parent=GCA000560365_02043_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5546,COG:S,RefSeq:WP_000611512.1,SO:0001217,UniParc:UPI0000054452,UniRef:UniRef100_Q2FWV1,UniRef:UniRef50_A0A3D8ZD14,UniRef:UniRef90_A0A2X2MCQ2
contig_1	Infernal	gene	2095025	2095204	.	-	.	ID=GCA000560365_02044_gene;locus_tag=GCA000560365_02044;gene=rli28
contig_1	Infernal	ncRNA	2095025	2095204	9.1e-12	-	.	ID=GCA000560365_02044;Name=Listeria sRNA rli28;locus_tag=GCA000560365_02044;product=Listeria sRNA rli28;Dbxref=RFAM:RF01492;Parent=GCA000560365_02044_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01492
contig_1	Pyrodigal	gene	2095323	2095553	.	-	.	ID=GCA000560365_02045_gene;locus_tag=GCA000560365_02045
contig_1	Pyrodigal	CDS	2095323	2095553	.	-	0	ID=GCA000560365_02045;Name=DUF2951 domain-containing protein;locus_tag=GCA000560365_02045;product=DUF2951 domain-containing protein;Parent=GCA000560365_02045_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A7U0G7S2,UniRef:UniRef90_UPI00352AF0CC
contig_1	Pyrodigal	gene	2095677	2095964	.	-	.	ID=GCA000560365_02046_gene;locus_tag=GCA000560365_02046
contig_1	Pyrodigal	CDS	2095677	2095964	.	-	0	ID=GCA000560365_02046;Name=Phage protein;locus_tag=GCA000560365_02046;product=Phage protein;Parent=GCA000560365_02046_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001040261.1,SO:0001217,UniParc:UPI000005444F,UniRef:UniRef100_Q2FWU7,UniRef:UniRef50_A0A0H3JMR5,UniRef:UniRef90_W5R962
contig_1	Pyrodigal	gene	2096011	2096163	.	-	.	ID=GCA000560365_02047_gene;locus_tag=GCA000560365_02047
contig_1	Pyrodigal	CDS	2096011	2096163	.	-	0	ID=GCA000560365_02047;Name=Phage protein;locus_tag=GCA000560365_02047;product=Phage protein;Parent=GCA000560365_02047_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A345AQI6,UniRef:UniRef90_W5RAM1
contig_1	Pyrodigal	gene	2096153	2099938	.	-	.	ID=GCA000560365_02048_gene;locus_tag=GCA000560365_02048
contig_1	Pyrodigal	CDS	2096153	2099938	.	-	0	ID=GCA000560365_02048;Name=Peptidase S74 domain-containing protein;locus_tag=GCA000560365_02048;product=Peptidase S74 domain-containing protein;Parent=GCA000560365_02048_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000582165.1,SO:0001217,UniParc:UPI0000696C87,UniRef:UniRef100_A0A9X9P4I3,UniRef:UniRef50_A0A2I6PDL0,UniRef:UniRef90_A0A9X9JUS9
contig_1	Pyrodigal	gene	2099954	2101438	.	-	.	ID=GCA000560365_02049_gene;locus_tag=GCA000560365_02049
contig_1	Pyrodigal	CDS	2099954	2101438	.	-	0	ID=GCA000560365_02049;Name=Phage tail protein;locus_tag=GCA000560365_02049;product=Phage tail protein;Parent=GCA000560365_02049_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000567394.1,SO:0001217,UniParc:UPI0000696C88,UniRef:UniRef100_A0A0H3U501,UniRef:UniRef50_C5I676,UniRef:UniRef90_C8CH31
contig_1	Pyrodigal	gene	2101435	2105964	.	-	.	ID=GCA000560365_02050_gene;locus_tag=GCA000560365_02050
contig_1	Pyrodigal	CDS	2101435	2105964	.	-	0	ID=GCA000560365_02050;Name=lysostaphin;locus_tag=GCA000560365_02050;product=lysostaphin;Parent=GCA000560365_02050_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_031808152.1,SO:0001217,UniParc:UPI00044FCE8B,UniRef:UniRef100_UPI00044FCE8B,UniRef:UniRef50_A0A0U1MQ46,UniRef:UniRef90_A0A5P6T594
contig_1	Pyrodigal	gene	2106021	2106158	.	-	.	ID=GCA000560365_02051_gene;locus_tag=GCA000560365_02051
contig_1	Pyrodigal	CDS	2106021	2106158	.	-	0	ID=GCA000560365_02051;Name=Phage protein;locus_tag=GCA000560365_02051;product=Phage protein;Parent=GCA000560365_02051_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_C8CH29,UniRef:UniRef90_A0A898CKY1
contig_1	Pyrodigal	gene	2106209	2106559	.	-	.	ID=GCA000560365_02052_gene;locus_tag=GCA000560365_02052;gene=gpG
contig_1	Pyrodigal	CDS	2106209	2106559	.	-	0	ID=GCA000560365_02052;Name=phage tail assembly chaperone G;locus_tag=GCA000560365_02052;product=phage tail assembly chaperone G;gene=gpG;Parent=GCA000560365_02052_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001096354.1,SO:0001217,UniParc:UPI0000696C8A,UniRef:UniRef100_A0A0H3U503,UniRef:UniRef50_A0A0H3U503,UniRef:UniRef90_A0A0H3U503
contig_1	Pyrodigal	gene	2106875	2107519	.	-	.	ID=GCA000560365_02053_gene;locus_tag=GCA000560365_02053
contig_1	Pyrodigal	CDS	2106875	2107519	.	-	0	ID=GCA000560365_02053;Name=Phage tail protein;locus_tag=GCA000560365_02053;product=Phage tail protein;Parent=GCA000560365_02053_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000260578.1,SO:0001217,UniParc:UPI0000696C8C,UniRef:UniRef100_A0A0H3U4E6,UniRef:UniRef50_Q4L5J9,UniRef:UniRef90_A0A7U7JQL9
contig_1	Pyrodigal	gene	2107523	2107927	.	-	.	ID=GCA000560365_02054_gene;locus_tag=GCA000560365_02054
contig_1	Pyrodigal	CDS	2107523	2107927	.	-	0	ID=GCA000560365_02054;Name=Bacteriophage protein;locus_tag=GCA000560365_02054;product=Bacteriophage protein;Parent=GCA000560365_02054_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000565500.1,SO:0001217,UniParc:UPI00015FD6CB,UniRef:UniRef100_A0A1S6AV09,UniRef:UniRef50_Q4L5J8,UniRef:UniRef90_A0A2K4ANR9
contig_1	Pyrodigal	gene	2107924	2108328	.	-	.	ID=GCA000560365_02055_gene;locus_tag=GCA000560365_02055
contig_1	Pyrodigal	CDS	2107924	2108328	.	-	0	ID=GCA000560365_02055;Name=Phage protein;locus_tag=GCA000560365_02055;product=Phage protein;Parent=GCA000560365_02055_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000114229.1,SO:0001217,UniParc:UPI0000696C8D,UniRef:UniRef100_A0A0H3U2V1,UniRef:UniRef50_A0A9P3ZD13,UniRef:UniRef90_A0A9P3ZD13
contig_1	Pyrodigal	gene	2108325	2108687	.	-	.	ID=GCA000560365_02056_gene;locus_tag=GCA000560365_02056
contig_1	Pyrodigal	CDS	2108325	2108687	.	-	0	ID=GCA000560365_02056;Name=Phage protein;locus_tag=GCA000560365_02056;product=Phage protein;Parent=GCA000560365_02056_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000755150.1,SO:0001217,UniParc:UPI00000CAC93,UniRef:UniRef100_A0AA44A5F5,UniRef:UniRef50_Q4L5J6,UniRef:UniRef90_A0A7U7PW63
contig_1	Pyrodigal	gene	2108671	2108955	.	-	.	ID=GCA000560365_02057_gene;locus_tag=GCA000560365_02057
contig_1	Pyrodigal	CDS	2108671	2108955	.	-	0	ID=GCA000560365_02057;Name=Phage head-tail adapter protein;locus_tag=GCA000560365_02057;product=Phage head-tail adapter protein;Parent=GCA000560365_02057_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000150936.1,SO:0001217,UniParc:UPI00000CACBA,UniRef:UniRef100_A0AA43V301,UniRef:UniRef50_A0A7U7PWE4,UniRef:UniRef90_A0AA43V301
contig_1	Pyrodigal	gene	2108945	2109229	.	-	.	ID=GCA000560365_02058_gene;locus_tag=GCA000560365_02058
contig_1	Pyrodigal	CDS	2108945	2109229	.	-	0	ID=GCA000560365_02058;Name=Phage protein;locus_tag=GCA000560365_02058;product=Phage protein;Parent=GCA000560365_02058_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000238236.1,SO:0001217,UniParc:UPI00000CAD90,UniRef:UniRef100_A0A9X9P1T4,UniRef:UniRef50_A0A0H3U504,UniRef:UniRef90_A0A6B0BAF2
contig_1	Pyrodigal	gene	2109249	2110394	.	-	.	ID=GCA000560365_02059_gene;locus_tag=GCA000560365_02059
contig_1	Pyrodigal	CDS	2109249	2110394	.	-	0	ID=GCA000560365_02059;Name=phage major capsid protein;locus_tag=GCA000560365_02059;product=phage major capsid protein;Dbxref=GO:0005198,GO:0019068,GO:0044423;Parent=GCA000560365_02059_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000154559.1,SO:0001217,UniParc:UPI00000CAC20,UniRef:UniRef100_A0A977TEQ5,UniRef:UniRef50_B9DJD8,UniRef:UniRef90_A0A5S9C4Q8
contig_1	Pyrodigal	gene	2110418	2111155	.	-	.	ID=GCA000560365_02060_gene;locus_tag=GCA000560365_02060;gene=clpP
contig_1	Pyrodigal	CDS	2110418	2111155	.	-	0	ID=GCA000560365_02060;Name=ATP-dependent Clp protease proteolytic subunit;locus_tag=GCA000560365_02060;product=ATP-dependent Clp protease proteolytic subunit;gene=clpP;Parent=GCA000560365_02060_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0740,COG:O,KEGG:K01358,RefSeq:WP_000642728.1,SO:0001217,UniParc:UPI00000CAB27,UniRef:UniRef100_A0A1X9GZV5,UniRef:UniRef50_A0A173M2D6,UniRef:UniRef90_A0A173M2D6;ec_number=3.4.21.92
contig_1	Pyrodigal	gene	2111139	2112326	.	-	.	ID=GCA000560365_02061_gene;locus_tag=GCA000560365_02061
contig_1	Pyrodigal	CDS	2111139	2112326	.	-	0	ID=GCA000560365_02061;Name=phage portal protein;locus_tag=GCA000560365_02061;product=phage portal protein;Dbxref=GO:0005198,GO:0019068,GO:0044423;Parent=GCA000560365_02061_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A9X9JZ49,UniRef:UniRef90_A0A9X9JZ49
contig_1	Pyrodigal	gene	2112342	2114003	.	-	.	ID=GCA000560365_02062_gene;locus_tag=GCA000560365_02062;gene=ymfN
contig_1	Pyrodigal	CDS	2112342	2114003	.	-	0	ID=GCA000560365_02062;Name=Terminase large subunit;locus_tag=GCA000560365_02062;product=Terminase large subunit;gene=ymfN;Parent=GCA000560365_02062_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4626,COG:X,RefSeq:WP_000625088.1,SO:0001217,UniParc:UPI00000CADB1,UniRef:UniRef100_A0A9X9JWR2,UniRef:UniRef50_Q4L5J1,UniRef:UniRef90_A0A7U7JQH6
contig_1	Pyrodigal	gene	2114000	2114344	.	-	.	ID=GCA000560365_02063_gene;locus_tag=GCA000560365_02063
contig_1	Pyrodigal	CDS	2114000	2114344	.	-	0	ID=GCA000560365_02063;Name=Phage protein;locus_tag=GCA000560365_02063;product=Phage protein;Parent=GCA000560365_02063_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0AAP7IF51,UniRef:UniRef90_UPI00090F1C5D
contig_1	Pyrodigal	gene	2114474	2114773	.	-	.	ID=GCA000560365_02064_gene;locus_tag=GCA000560365_02064;gene=mcrA
contig_1	Pyrodigal	CDS	2114474	2114773	.	-	0	ID=GCA000560365_02064;Name=Putative HNH nuclease YajD;locus_tag=GCA000560365_02064;product=Putative HNH nuclease YajD;gene=mcrA;Parent=GCA000560365_02064_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1403,COG:V,RefSeq:WP_000988336.1,SO:0001217,UniParc:UPI00003B180E,UniRef:UniRef100_A0A075LZI9,UniRef:UniRef50_A0A2X2K0P5,UniRef:UniRef90_A0A6B0BKP5
contig_1	Pyrodigal	gene	2115005	2115421	.	-	.	ID=GCA000560365_02065_gene;locus_tag=GCA000560365_02065
contig_1	Pyrodigal	CDS	2115005	2115421	.	-	0	ID=GCA000560365_02065;Name=Transcriptional regulator;locus_tag=GCA000560365_02065;product=Transcriptional regulator;Parent=GCA000560365_02065_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000590122.1,SO:0001217,UniParc:UPI00000CACDE,UniRef:UniRef100_A0AA43V3D4,UniRef:UniRef50_Q4L3V7,UniRef:UniRef90_A0A345AR05
contig_1	Pyrodigal	gene	2115449	2115649	.	-	.	ID=GCA000560365_02066_gene;locus_tag=GCA000560365_02066
contig_1	Pyrodigal	CDS	2115449	2115649	.	-	0	ID=GCA000560365_02066;Name=Phage protein;locus_tag=GCA000560365_02066;product=Phage protein;Parent=GCA000560365_02066_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000265043.1,SO:0001217,UniParc:UPI000009B286,UniRef:UniRef100_W5R8L4,UniRef:UniRef50_A0A0H3JV18,UniRef:UniRef90_A0A0H3JV18
contig_1	Pyrodigal	gene	2115649	2115798	.	-	.	ID=GCA000560365_02067_gene;locus_tag=GCA000560365_02067;gene=rinB
contig_1	Pyrodigal	CDS	2115649	2115798	.	-	0	ID=GCA000560365_02067;Name=transcriptional activator RinB;locus_tag=GCA000560365_02067;product=transcriptional activator RinB;gene=rinB;Parent=GCA000560365_02067_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A653ZBR0,UniRef:UniRef90_A0AA47KWC5
contig_1	Pyrodigal	gene	2115795	2116181	.	-	.	ID=GCA000560365_02068_gene;locus_tag=GCA000560365_02068
contig_1	Pyrodigal	CDS	2115795	2116181	.	-	0	ID=GCA000560365_02068;Name=Phage protein;locus_tag=GCA000560365_02068;product=Phage protein;Parent=GCA000560365_02068_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_C8CH08,UniRef:UniRef90_A0A0E3T9I5
contig_1	Pyrodigal	gene	2116178	2116384	.	-	.	ID=GCA000560365_02069_gene;locus_tag=GCA000560365_02069
contig_1	Pyrodigal	CDS	2116178	2116384	.	-	0	ID=GCA000560365_02069;Name=DUF1381 domain-containing protein;locus_tag=GCA000560365_02069;product=DUF1381 domain-containing protein;Parent=GCA000560365_02069_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_B2ZYX3,UniRef:UniRef90_A0A0N9BAZ6
contig_1	Pyrodigal	gene	2116381	2116626	.	-	.	ID=GCA000560365_02070_gene;locus_tag=GCA000560365_02070
contig_1	Pyrodigal	CDS	2116381	2116626	.	-	0	ID=GCA000560365_02070;Name=Phage protein;locus_tag=GCA000560365_02070;product=Phage protein;Parent=GCA000560365_02070_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001282074.1,SO:0001217,UniParc:UPI0000505B47,UniRef:UniRef100_A0A0H3U2V0,UniRef:UniRef50_A0A0H3U2V0,UniRef:UniRef90_A0A0H3U2V0
contig_1	Pyrodigal	gene	2116663	2117196	.	-	.	ID=GCA000560365_02071_gene;locus_tag=GCA000560365_02071
contig_1	Pyrodigal	CDS	2116663	2117196	.	-	0	ID=GCA000560365_02071;Name=dUTP diphosphatase;locus_tag=GCA000560365_02071;product=dUTP diphosphatase;Parent=GCA000560365_02071_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000181819.1,SO:0001217,UniParc:UPI0000696C90,UniRef:UniRef100_A0A0H3U2T1,UniRef:UniRef50_A0A5C8XBY4,UniRef:UniRef90_A0A0U1MJL5
contig_1	Pyrodigal	gene	2117189	2117431	.	-	.	ID=GCA000560365_02072_gene;locus_tag=GCA000560365_02072
contig_1	Pyrodigal	CDS	2117189	2117431	.	-	0	ID=GCA000560365_02072;Name=Phage protein;locus_tag=GCA000560365_02072;product=Phage protein;Parent=GCA000560365_02072_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000700108.1,SO:0001217,UniParc:UPI00000CAF0C,UniRef:UniRef100_A0A2I6PEF8,UniRef:UniRef50_A0A2I6PEF8,UniRef:UniRef90_A0A2I6PEF8
contig_1	Pyrodigal	gene	2117421	2117657	.	-	.	ID=GCA000560365_02073_gene;locus_tag=GCA000560365_02073
contig_1	Pyrodigal	CDS	2117421	2117657	.	-	0	ID=GCA000560365_02073;Name=DUF1024 domain-containing protein;locus_tag=GCA000560365_02073;product=DUF1024 domain-containing protein;Parent=GCA000560365_02073_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001065101.1,SO:0001217,UniParc:UPI00000CAF0D,UniRef:UniRef100_A0A0H3U313,UniRef:UniRef50_A9CR86,UniRef:UniRef90_A0A0H3U313
contig_1	Pyrodigal	gene	2117650	2118021	.	-	.	ID=GCA000560365_02074_gene;locus_tag=GCA000560365_02074
contig_1	Pyrodigal	CDS	2117650	2118021	.	-	0	ID=GCA000560365_02074;Name=Acetyltransferase;locus_tag=GCA000560365_02074;product=Acetyltransferase;Parent=GCA000560365_02074_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001549172.1,SO:0001217,UniParc:UPI0000696C91,UniRef:UniRef100_A0A1S6BJ04,UniRef:UniRef50_C8CH13,UniRef:UniRef90_A0A0H3U4X7
contig_1	Pyrodigal	gene	2118030	2118272	.	-	.	ID=GCA000560365_02075_gene;locus_tag=GCA000560365_02075
contig_1	Pyrodigal	CDS	2118030	2118272	.	-	0	ID=GCA000560365_02075;Name=Phage family protein;locus_tag=GCA000560365_02075;product=Phage family protein;Parent=GCA000560365_02075_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000131383.1,SO:0001217,UniParc:UPI0000696C92,UniRef:UniRef100_A0A0H3U4B0,UniRef:UniRef50_M9NTB1,UniRef:UniRef90_A0A0H3U4B0
contig_1	Pyrodigal	gene	2118276	2118644	.	-	.	ID=GCA000560365_02076_gene;locus_tag=GCA000560365_02076
contig_1	Pyrodigal	CDS	2118276	2118644	.	-	0	ID=GCA000560365_02076;Name=Phage protein;locus_tag=GCA000560365_02076;product=Phage protein;Parent=GCA000560365_02076_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000101288.1,SO:0001217,UniParc:UPI00000CAF10,UniRef:UniRef100_A0A0U1MQ67,UniRef:UniRef50_A0A075M052,UniRef:UniRef90_A0A075M052
contig_1	Pyrodigal	gene	2118657	2119061	.	-	.	ID=GCA000560365_02077_gene;locus_tag=GCA000560365_02077
contig_1	Pyrodigal	CDS	2118657	2119061	.	-	0	ID=GCA000560365_02077;Name=Phage protein;locus_tag=GCA000560365_02077;product=Phage protein;Parent=GCA000560365_02077_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000401977.1,SO:0001217,UniParc:UPI0000696C94,UniRef:UniRef100_A0A0H3U2W2,UniRef:UniRef50_A0A7U7JQI6,UniRef:UniRef90_A0A7U7JQI6
contig_1	Pyrodigal	gene	2119070	2119288	.	-	.	ID=GCA000560365_02078_gene;locus_tag=GCA000560365_02078
contig_1	Pyrodigal	CDS	2119070	2119288	.	-	0	ID=GCA000560365_02078;Name=Phage protein;locus_tag=GCA000560365_02078;product=Phage protein;Parent=GCA000560365_02078_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000338530.1,SO:0001217,UniParc:UPI000009B4CF,UniRef:UniRef100_A0A9X9JUK2,UniRef:UniRef50_A0A0H3K3X1,UniRef:UniRef90_A0A0H3K3X1
contig_1	Pyrodigal	gene	2119295	2120188	.	-	.	ID=GCA000560365_02079_gene;locus_tag=GCA000560365_02079;gene=dnaD
contig_1	Pyrodigal	CDS	2119295	2120188	.	-	0	ID=GCA000560365_02079;Name=DnaD domain-containing protein;locus_tag=GCA000560365_02079;product=DnaD domain-containing protein;gene=dnaD;Parent=GCA000560365_02079_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3935,COG:L,RefSeq:WP_000148333.1,SO:0001217,UniParc:UPI00000CA984,UniRef:UniRef100_A0A075M4D6,UniRef:UniRef50_A0EWX4,UniRef:UniRef90_A0A2I6PDG7
contig_1	Pyrodigal	gene	2120218	2120688	.	-	.	ID=GCA000560365_02080_gene;locus_tag=GCA000560365_02080;gene=ssb
contig_1	Pyrodigal	CDS	2120218	2120688	.	-	0	ID=GCA000560365_02080;Name=Single-stranded DNA-binding protein;locus_tag=GCA000560365_02080;product=Single-stranded DNA-binding protein;Dbxref=GO:0003697,GO:0006260,GO:0009295;gene=ssb;Parent=GCA000560365_02080_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0629,COG:L,RefSeq:WP_000934753.1,SO:0001217,UniParc:UPI0000696C95,UniRef:UniRef100_A0A0H3U4B5,UniRef:UniRef50_P37455,UniRef:UniRef90_Q931K4
contig_1	Pyrodigal	gene	2120689	2121174	.	-	.	ID=GCA000560365_02081_gene;locus_tag=GCA000560365_02081;gene=phnP
contig_1	Pyrodigal	CDS	2120689	2121174	.	-	0	ID=GCA000560365_02081;Name=Metallo-beta-lactamase superfamily domain protein;locus_tag=GCA000560365_02081;product=Metallo-beta-lactamase superfamily domain protein;gene=phnP;Parent=GCA000560365_02081_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1235,COG:P,SO:0001217,UniParc:UPI0000696C96,UniRef:UniRef100_A0A0H3U2T4,UniRef:UniRef50_A0A499SQV4,UniRef:UniRef90_S4V971
contig_1	Pyrodigal	gene	2121387	2122307	.	-	.	ID=GCA000560365_02082_gene;locus_tag=GCA000560365_02082
contig_1	Pyrodigal	CDS	2121387	2122307	.	-	0	ID=GCA000560365_02082;Name=DNA single-strand annealing proteins;locus_tag=GCA000560365_02082;product=DNA single-strand annealing proteins;Parent=GCA000560365_02082_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07455,RefSeq:WP_000138475.1,SO:0001217,UniParc:UPI000009BBBB,UniRef:UniRef100_A0A9X9P1Q5,UniRef:UniRef50_A0A2H4JDY2,UniRef:UniRef90_A0A7U7JQQ2
contig_1	Pyrodigal	gene	2122309	2124252	.	-	.	ID=GCA000560365_02083_gene;locus_tag=GCA000560365_02083
contig_1	Pyrodigal	CDS	2122309	2124252	.	-	0	ID=GCA000560365_02083;Name=Nuclease SbcCD subunit C;locus_tag=GCA000560365_02083;product=Nuclease SbcCD subunit C;Parent=GCA000560365_02083_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000700561.1,SO:0001217,UniParc:UPI0001698996,UniRef:UniRef100_A0A0H2XI78,UniRef:UniRef50_A0A0U1MQA4,UniRef:UniRef90_A0A0U1MQA4
contig_1	Pyrodigal	gene	2124261	2124524	.	-	.	ID=GCA000560365_02084_gene;locus_tag=GCA000560365_02084
contig_1	Pyrodigal	CDS	2124261	2124524	.	-	0	ID=GCA000560365_02084;Name=Phage protein;locus_tag=GCA000560365_02084;product=Phage protein;Parent=GCA000560365_02084_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001205732.1,SO:0001217,UniParc:UPI00000D7769,UniRef:UniRef100_A0A0E3TAG5,UniRef:UniRef50_O80079,UniRef:UniRef90_O80079
contig_1	Pyrodigal	gene	2124533	2124793	.	-	.	ID=GCA000560365_02085_gene;locus_tag=GCA000560365_02085
contig_1	Pyrodigal	CDS	2124533	2124793	.	-	0	ID=GCA000560365_02085;Name=DUF1108 domain-containing protein;locus_tag=GCA000560365_02085;product=DUF1108 domain-containing protein;Parent=GCA000560365_02085_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000291513.1,SO:0001217,UniParc:UPI0000696C98,UniRef:UniRef100_A0A0H3U2T6,UniRef:UniRef50_B2ZYV1,UniRef:UniRef90_A0A0H3U2T6
contig_1	Pyrodigal	gene	2124833	2125093	.	-	.	ID=GCA000560365_02086_gene;locus_tag=GCA000560365_02086
contig_1	Pyrodigal	CDS	2124833	2125093	.	-	0	ID=GCA000560365_02086;Name=DUF2482 domain-containing protein;locus_tag=GCA000560365_02086;product=DUF2482 domain-containing protein;Parent=GCA000560365_02086_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001549178.1,SO:0001217,UniParc:UPI0000696C99,UniRef:UniRef100_A0A0H3U2W4,UniRef:UniRef50_A0A0H3U2W4,UniRef:UniRef90_A0A0H3U2W4
contig_1	Pyrodigal	gene	2125188	2125349	.	-	.	ID=GCA000560365_02087_gene;locus_tag=GCA000560365_02087
contig_1	Pyrodigal	CDS	2125188	2125349	.	-	0	ID=GCA000560365_02087;Name=DUF1270 domain-containing protein;locus_tag=GCA000560365_02087;product=DUF1270 domain-containing protein;Parent=GCA000560365_02087_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001285960.1,SO:0001217,UniParc:UPI00015FD6D1,UniRef:UniRef100_A0A0H3U4Y7,UniRef:UniRef50_B2ZYU9,UniRef:UniRef90_S4V7J2
contig_1	Pyrodigal	gene	2125346	2125666	.	-	.	ID=GCA000560365_02088_gene;locus_tag=GCA000560365_02088
contig_1	Pyrodigal	CDS	2125346	2125666	.	-	0	ID=GCA000560365_02088;Name=DUF771 domain-containing protein;locus_tag=GCA000560365_02088;product=DUF771 domain-containing protein;Parent=GCA000560365_02088_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4707,COG:X,RefSeq:WP_001120199.1,SO:0001217,UniParc:UPI0000696C9A,UniRef:UniRef100_A0A0H3U4C3,UniRef:UniRef50_Q4L5G9,UniRef:UniRef90_A0A075LYF5
contig_1	Pyrodigal	gene	2125725	2125955	.	+	.	ID=GCA000560365_02089_gene;locus_tag=GCA000560365_02089
contig_1	Pyrodigal	CDS	2125725	2125955	.	+	0	ID=GCA000560365_02089;Name=hypothetical protein;locus_tag=GCA000560365_02089;product=hypothetical protein;Parent=GCA000560365_02089_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000549548.1,SO:0001217,UniParc:UPI00015FD6D2,UniRef:UniRef100_A0A0H3U2T9,UniRef:UniRef50_A0A0H3U2T9,UniRef:UniRef90_A0A0H3U2T9
contig_1	Pyrodigal	gene	2125952	2126128	.	-	.	ID=GCA000560365_02090_gene;locus_tag=GCA000560365_02090
contig_1	Pyrodigal	CDS	2125952	2126128	.	-	0	ID=GCA000560365_02090;Name=hypothetical protein;locus_tag=GCA000560365_02090;product=hypothetical protein;Parent=GCA000560365_02090_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001001356.1,SO:0001217,UniParc:UPI00003B1A91,UniRef:UniRef100_A0A2C9TR45,UniRef:UniRef50_A0A2C9TR45,UniRef:UniRef90_A0A2C9TR45
contig_1	Pyrodigal	gene	2126144	2126896	.	-	.	ID=GCA000560365_02091_gene;locus_tag=GCA000560365_02091;gene=kilAC
contig_1	Pyrodigal	CDS	2126144	2126896	.	-	0	ID=GCA000560365_02091;Name=Anti-repressor;locus_tag=GCA000560365_02091;product=Anti-repressor;gene=kilAC;Parent=GCA000560365_02091_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3645,COG:X,KEGG:K07741,RefSeq:WP_001148642.1,SO:0001217,UniParc:UPI0000696C9C,UniRef:UniRef100_A0A0H3U319,UniRef:UniRef50_A0A0C6ELE4,UniRef:UniRef90_C5I631
contig_1	Pyrodigal	gene	2126947	2127276	.	+	.	ID=GCA000560365_02092_gene;locus_tag=GCA000560365_02092
contig_1	Pyrodigal	CDS	2126947	2127276	.	+	0	ID=GCA000560365_02092;Name=Phage protein;locus_tag=GCA000560365_02092;product=Phage protein;Parent=GCA000560365_02092_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000180411.1,SO:0001217,UniParc:UPI0000696C9D,UniRef:UniRef100_A0A0H3U4Z1,UniRef:UniRef50_A0A0H3JR08,UniRef:UniRef90_A0A0H3JR08
contig_1	Pyrodigal	gene	2127265	2127480	.	-	.	ID=GCA000560365_02093_gene;locus_tag=GCA000560365_02093
contig_1	Pyrodigal	CDS	2127265	2127480	.	-	0	ID=GCA000560365_02093;Name=DUF2829 domain-containing protein;locus_tag=GCA000560365_02093;product=DUF2829 domain-containing protein;Parent=GCA000560365_02093_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001025404.1,SO:0001217,UniParc:UPI00000C7FA5,UniRef:UniRef100_A0A0H3U4C7,UniRef:UniRef50_A0A0H3U4C7,UniRef:UniRef90_A0A0H3U4C7
contig_1	Pyrodigal	gene	2127496	2127759	.	-	.	ID=GCA000560365_02094_gene;locus_tag=GCA000560365_02094;gene=xRE
contig_1	Pyrodigal	CDS	2127496	2127759	.	-	0	ID=GCA000560365_02094;Name=Helix-turn-helix domain protein;locus_tag=GCA000560365_02094;product=Helix-turn-helix domain protein;gene=xRE;Parent=GCA000560365_02094_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1476,COG:K,RefSeq:WP_000854072.1,SO:0001217,UniParc:UPI0000054223,UniRef:UniRef100_Q2FY91,UniRef:UniRef50_Q2FY91,UniRef:UniRef90_Q2FY91
contig_1	Pyrodigal	gene	2127892	2128605	.	+	.	ID=GCA000560365_02095_gene;locus_tag=GCA000560365_02095
contig_1	Pyrodigal	CDS	2127892	2128605	.	+	0	ID=GCA000560365_02095;Name=HTH cro/C1-type domain-containing protein;locus_tag=GCA000560365_02095;product=HTH cro/C1-type domain-containing protein;Parent=GCA000560365_02095_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2932,COG:X,RefSeq:WP_001031454.1,SO:0001217,UniParc:UPI0000054224,UniRef:UniRef100_Q2FY89,UniRef:UniRef50_A0A0D6XS71,UniRef:UniRef90_A0A2I6PF08
contig_1	Pyrodigal	gene	2128621	2129553	.	+	.	ID=GCA000560365_02096_gene;locus_tag=GCA000560365_02096;gene=dnaQ
contig_1	Pyrodigal	CDS	2128621	2129553	.	+	0	ID=GCA000560365_02096;Name=Exonuclease family;locus_tag=GCA000560365_02096;product=Exonuclease family;gene=dnaQ;Parent=GCA000560365_02096_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0847,COG:L,RefSeq:WP_000759682.1,SO:0001217,UniParc:UPI000009BB0A,UniRef:UniRef100_Q2FY88,UniRef:UniRef50_A0A240C1T0,UniRef:UniRef90_Q2FY88
contig_1	Pyrodigal	gene	2129559	2129900	.	+	.	ID=GCA000560365_02097_gene;locus_tag=GCA000560365_02097
contig_1	Pyrodigal	CDS	2129559	2129900	.	+	0	ID=GCA000560365_02097;Name=Phage protein;locus_tag=GCA000560365_02097;product=Phage protein;Parent=GCA000560365_02097_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000591749.1,SO:0001217,UniParc:UPI0000054226,UniRef:UniRef100_M9NTH6,UniRef:UniRef50_M9NTH6,UniRef:UniRef90_M9NTH6
contig_1	Pyrodigal	gene	2130104	2130286	.	+	.	ID=GCA000560365_02098_gene;locus_tag=GCA000560365_02098
contig_1	Pyrodigal	CDS	2130104	2130286	.	+	0	ID=GCA000560365_02098;Name=Phage protein;locus_tag=GCA000560365_02098;product=Phage protein;Parent=GCA000560365_02098_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000705246.1,SO:0001217,UniParc:UPI00015FD6D3,UniRef:UniRef100_A0A0H3U4Z4,UniRef:UniRef50_A4ZF71,UniRef:UniRef90_M9NSW6
contig_1	Pyrodigal	gene	2130364	2131077	.	+	.	ID=GCA000560365_02099_gene;locus_tag=GCA000560365_02099;gene=mazF
contig_1	Pyrodigal	CDS	2130364	2131077	.	+	0	ID=GCA000560365_02099;Name=Endoribonuclease MazF;locus_tag=GCA000560365_02099;product=Endoribonuclease MazF;gene=mazF;Parent=GCA000560365_02099_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001549185.1,SO:0001217,UniParc:UPI0000696C9F,UniRef:UniRef100_C8CGX3,UniRef:UniRef50_A0A2C9TLD0,UniRef:UniRef90_A0A2C9TLD0
contig_1	Pyrodigal	gene	2131268	2132305	.	+	.	ID=GCA000560365_02100_gene;locus_tag=GCA000560365_02100
contig_1	Pyrodigal	CDS	2131268	2132305	.	+	0	ID=GCA000560365_02100;Name=Integrase;locus_tag=GCA000560365_02100;product=Integrase;Parent=GCA000560365_02100_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000857199.1,SO:0001217,UniParc:UPI0000696CA0,UniRef:UniRef100_A0A5A8VGL6,UniRef:UniRef90_Q38460
contig_1	Pyrodigal	gene	2132362	2133186	.	+	.	ID=GCA000560365_02101_gene;locus_tag=GCA000560365_02101;gene=sph
contig_1	Pyrodigal	CDS	2132362	2133186	.	+	0	ID=GCA000560365_02101;Name=sphingomyelin phosphodiesterase;locus_tag=GCA000560365_02101;product=sphingomyelin phosphodiesterase;Dbxref=GO:0004767;gene=sph;Parent=GCA000560365_02101_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000283440.1,SO:0001217,UniParc:UPI00000D9F09,UniRef:UniRef100_A0A1P8L6H7,UniRef:UniRef50_Q2FWP1,UniRef:UniRef90_A0A0Q0XKP0;ec_number=3.1.4.12
contig_1	Pyrodigal	gene	2133424	2134440	.	-	.	ID=GCA000560365_02102_gene;locus_tag=GCA000560365_02102;gene=lukG
contig_1	Pyrodigal	CDS	2133424	2134440	.	-	0	ID=GCA000560365_02102;Name=bi-component leukocidin LukGH subunit G;locus_tag=GCA000560365_02102;product=bi-component leukocidin LukGH subunit G;Dbxref=GO:0005576,GO:0051715;gene=lukG;Parent=GCA000560365_02102_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000595324,RefSeq:WP_000595324.1,SO:0001217,UniParc:UPI0000696CA1,UniRef:UniRef100_Q2FWP0,UniRef:UniRef50_Q2FWP0,UniRef:UniRef90_Q2FWP0
contig_1	Pyrodigal	gene	2134462	2135517	.	-	.	ID=GCA000560365_02103_gene;locus_tag=GCA000560365_02103;gene=lukH
contig_1	Pyrodigal	CDS	2134462	2135517	.	-	0	ID=GCA000560365_02103;Name=bi-component leukocidin LukGH subunit H;locus_tag=GCA000560365_02103;product=bi-component leukocidin LukGH subunit H;Dbxref=GO:0005576,GO:0051715;gene=lukH;Parent=GCA000560365_02103_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000791407,RefSeq:WP_000791407.1,SO:0001217,UniParc:UPI0000052260,UniRef:UniRef100_Q2FWN9,UniRef:UniRef50_Q2FWN9,UniRef:UniRef90_Q2FWN9
contig_1	Pyrodigal	gene	2135952	2137175	.	+	.	ID=GCA000560365_02104_gene;locus_tag=GCA000560365_02104;gene=dapE
contig_1	Pyrodigal	CDS	2135952	2137175	.	+	0	ID=GCA000560365_02104;Name=putative succinyl-diaminopimelate desuccinylase;locus_tag=GCA000560365_02104;product=putative succinyl-diaminopimelate desuccinylase;Dbxref=GO:0009014,GO:0009089,GO:0019877,GO:0046872;gene=dapE;Parent=GCA000560365_02104_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0624,COG:E,RefSeq:WP_000206639.1,SO:0001217,UniParc:UPI0000696CA2,UniRef:UniRef100_A0A1S6BAQ0,UniRef:UniRef50_Q5HKI1,UniRef:UniRef90_Q99SN6;ec_number=3.5.1.18
contig_1	Pyrodigal	gene	2137547	2138392	.	-	.	ID=GCA000560365_02105_gene;locus_tag=GCA000560365_02105
contig_1	Pyrodigal	CDS	2137547	2138392	.	-	0	ID=GCA000560365_02105;Name=Class I SAM-dependent methyltransferase;locus_tag=GCA000560365_02105;product=Class I SAM-dependent methyltransferase;Parent=GCA000560365_02105_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000812010.1,SO:0001217,UniParc:UPI0000696CA3,UniRef:UniRef100_A0A5A8VID9,UniRef:UniRef50_Q2FWN7,UniRef:UniRef90_Q2FWN7
contig_1	Pyrodigal	gene	2138454	2139365	.	-	.	ID=GCA000560365_02106_gene;locus_tag=GCA000560365_02106
contig_1	Pyrodigal	CDS	2138454	2139365	.	-	0	ID=GCA000560365_02106;Name=Fe/B12 periplasmic-binding domain-containing protein;locus_tag=GCA000560365_02106;product=Fe/B12 periplasmic-binding domain-containing protein;Parent=GCA000560365_02106_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000825510.1,SO:0001217,UniParc:UPI0000054230,UniRef:UniRef100_Q2FWN6,UniRef:UniRef50_Q2FWN6,UniRef:UniRef90_Q2FWN6
contig_1	Pyrodigal	gene	2139526	2140833	.	+	.	ID=GCA000560365_02107_gene;locus_tag=GCA000560365_02107
contig_1	Pyrodigal	CDS	2139526	2140833	.	+	0	ID=GCA000560365_02107;Name=Na+-transporting ATP synthase;locus_tag=GCA000560365_02107;product=Na+-transporting ATP synthase;Parent=GCA000560365_02107_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001045079.1,SO:0001217,UniParc:UPI0000054232,UniRef:UniRef100_Q2FWN5,UniRef:UniRef50_Q4L3A1,UniRef:UniRef90_A0A8G2I1H9
contig_1	Pyrodigal	gene	2141686	2142129	.	-	.	ID=GCA000560365_02108_gene;locus_tag=GCA000560365_02108
contig_1	Pyrodigal	CDS	2141686	2142129	.	-	0	ID=GCA000560365_02108;Name=N-acetyltransferase domain-containing protein;locus_tag=GCA000560365_02108;product=N-acetyltransferase domain-containing protein;Parent=GCA000560365_02108_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000022887.1,SO:0001217,UniParc:UPI00000D9F0D,UniRef:UniRef100_Q2G2N9,UniRef:UniRef50_Q2G2N9,UniRef:UniRef90_Q2G2N9
contig_1	Pyrodigal	gene	2142294	2142635	.	-	.	ID=GCA000560365_02109_gene;locus_tag=GCA000560365_02109
contig_1	Pyrodigal	CDS	2142294	2142635	.	-	0	ID=GCA000560365_02109;Name=Membrane protein;locus_tag=GCA000560365_02109;product=Membrane protein;Parent=GCA000560365_02109_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001699BC7,UniRef:UniRef100_A0A0E8IM44,UniRef:UniRef50_Q2G2N8,UniRef:UniRef90_Q2G2N8
contig_1	Pyrodigal	gene	2142989	2143579	.	-	.	ID=GCA000560365_02110_gene;locus_tag=GCA000560365_02110;gene=xtmA
contig_1	Pyrodigal	CDS	2142989	2143579	.	-	0	ID=GCA000560365_02110;Name=Terminase small subunit;locus_tag=GCA000560365_02110;product=Terminase small subunit;gene=xtmA;Parent=GCA000560365_02110_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3728,COG:X,RefSeq:WP_001293058.1,SO:0001217,UniParc:UPI0000054235,UniRef:UniRef100_Q2G2N7,UniRef:UniRef50_Q4L4N2,UniRef:UniRef90_Q93CE3
contig_1	Pyrodigal	gene	2144490	2146106	.	-	.	ID=GCA000560365_02111_gene;locus_tag=GCA000560365_02111;gene=groL
contig_1	Pyrodigal	CDS	2144490	2146106	.	-	0	ID=GCA000560365_02111;Name=chaperonin GroEL;locus_tag=GCA000560365_02111;product=chaperonin GroEL;Dbxref=GO:0005524,GO:0005737,GO:0016853,GO:0042026,GO:0051082,GO:0140662;gene=groL;Parent=GCA000560365_02111_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0459,COG:O,RefSeq:WP_000240645.1,SO:0001217,UniParc:UPI00004B5C68,UniRef:UniRef100_Q2FF95,UniRef:UniRef50_Q9KKF0,UniRef:UniRef90_Q08854;ec_number=5.6.1.7
contig_1	Pyrodigal	gene	2146182	2146466	.	-	.	ID=GCA000560365_02112_gene;locus_tag=GCA000560365_02112;gene=groES
contig_1	Pyrodigal	CDS	2146182	2146466	.	-	0	ID=GCA000560365_02112;Name=co-chaperone GroES;locus_tag=GCA000560365_02112;product=co-chaperone GroES;Dbxref=GO:0005524,GO:0005737,GO:0044183,GO:0046872,GO:0051082,GO:0051085,GO:0051087;gene=groES;Parent=GCA000560365_02112_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0234,COG:O,KEGG:K04078,RefSeq:WP_000917289.1,SO:0001217,UniParc:UPI0000000ED6,UniRef:UniRef100_Q2FWN3,UniRef:UniRef50_Q2FWN3,UniRef:UniRef90_Q2FWN3
contig_1	Pyrodigal	gene	2146641	2147384	.	+	.	ID=GCA000560365_02113_gene;locus_tag=GCA000560365_02113;gene=mroQ
contig_1	Pyrodigal	CDS	2146641	2147384	.	+	0	ID=GCA000560365_02113;Name=intramembrane glutamic endopeptidase MroQ;locus_tag=GCA000560365_02113;product=intramembrane glutamic endopeptidase MroQ;Dbxref=GO:0004222,GO:0016020,GO:0071586;gene=mroQ;Parent=GCA000560365_02113_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1266,COG:O,RefSeq:WP_000197635.1,SO:0001217,UniParc:UPI0000054238,UniRef:UniRef100_A0A0H2XEK8,UniRef:UniRef50_A0A0H2XEK8,UniRef:UniRef90_A0A0H2XEK8;ec_number=3.4.26.-
contig_1	Pyrodigal	gene	2147409	2148662	.	-	.	ID=GCA000560365_02114_gene;locus_tag=GCA000560365_02114
contig_1	Pyrodigal	CDS	2147409	2148662	.	-	0	ID=GCA000560365_02114;Name=Membrane anchored protein;locus_tag=GCA000560365_02114;product=Membrane anchored protein;Parent=GCA000560365_02114_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000120307.1,SO:0001217,UniParc:UPI0000696CA4,UniRef:UniRef100_A0A1S6B2U1,UniRef:UniRef50_A0A2K4AJE0,UniRef:UniRef90_A0A6G4Z6S9
contig_1	Pyrodigal	gene	2148859	2149485	.	+	.	ID=GCA000560365_02115_gene;locus_tag=GCA000560365_02115;gene=fMR2
contig_1	Pyrodigal	CDS	2148859	2149485	.	+	0	ID=GCA000560365_02115;Name=Nitroreductase domain-containing protein;locus_tag=GCA000560365_02115;product=Nitroreductase domain-containing protein;gene=fMR2;Parent=GCA000560365_02115_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3560,COG:R,KEGG:K07078,RefSeq:WP_000522384.1,SO:0001217,UniParc:UPI000005423C,UniRef:UniRef100_Q2FWN0,UniRef:UniRef50_Q2FWN0,UniRef:UniRef90_Q2FWN0
contig_1	Bakta	gene	2149655	2149723	.	-	.	ID=GCA000560365_02116_gene;locus_tag=GCA000560365_02116;inference=ab initio prediction:Bakta;gene=nifR
contig_1	Bakta	CDS	2149655	2149723	.	-	0	ID=GCA000560365_02116;Name=Nitrogen fixation protein NifR;locus_tag=GCA000560365_02116;product=Nitrogen fixation protein NifR;gene=nifR;Parent=GCA000560365_02116_gene;Note=SO:0001217,UniParc:UPI0004F35BC7,UniRef:UniRef100_A0A7Z1SA60,UniRef:UniRef50_A0A7Z1SA60,UniRef:UniRef90_A0A7Z1SA60
contig_1	Pyrodigal	gene	2149846	2150631	.	+	.	ID=GCA000560365_02117_gene;locus_tag=GCA000560365_02117;gene=yafV
contig_1	Pyrodigal	CDS	2149846	2150631	.	+	0	ID=GCA000560365_02117;Name=Hydrolase in agr operon;locus_tag=GCA000560365_02117;product=Hydrolase in agr operon;Dbxref=GO:0016787;gene=yafV;Parent=GCA000560365_02117_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0388,COG:V,RefSeq:WP_000867960.1,SO:0001217,UniParc:UPI000005423D,UniRef:UniRef100_P55177,UniRef:UniRef50_P0DP65,UniRef:UniRef90_P0DP65;ec_number=3.5.-.-
contig_1	Infernal	gene	2150879	2151392	.	-	.	ID=GCA000560365_02118_gene;locus_tag=GCA000560365_02118;gene=RNAIII
contig_1	Infernal	ncRNA	2150879	2151392	8.3e-57	-	.	ID=GCA000560365_02118;Name=RNAIII;locus_tag=GCA000560365_02118;product=RNAIII;Dbxref=RFAM:RF00503;Parent=GCA000560365_02118_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00503
contig_1	Pyrodigal	gene	2151228	2151362	.	-	.	ID=GCA000560365_02119_gene;locus_tag=GCA000560365_02119;gene=hld
contig_1	Pyrodigal	CDS	2151228	2151362	.	-	0	ID=GCA000560365_02119;Name=delta-hemolysin;locus_tag=GCA000560365_02119;product=delta-hemolysin;Dbxref=GO:0005576,GO:0016020,GO:0019836,GO:0020002,GO:0090729;gene=hld;Parent=GCA000560365_02119_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K11039,NCBIProtein:AGU62139.1,RefSeq:WP_001549197.1,SO:0001217,UniParc:UPI0000000A3A,UniRef:UniRef100_Q2FWM8,UniRef:UniRef50_Q2FWM8,UniRef:UniRef90_Q2FWM8,VFDB:VFC0235,VFDB:VFG001292
contig_1	Pyrodigal	gene	2151544	2152167	.	+	.	ID=GCA000560365_02120_gene;locus_tag=GCA000560365_02120;gene=agrB
contig_1	Pyrodigal	CDS	2151544	2152167	.	+	0	ID=GCA000560365_02120;Name=accessory gene regulator AgrB;locus_tag=GCA000560365_02120;product=accessory gene regulator AgrB;Dbxref=GO:0005886,GO:0006508,GO:0008233,GO:0009372;gene=agrB;Parent=GCA000560365_02120_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001105707,KEGG:K07813,SO:0001217,UniParc:UPI0000054240,UniRef:UniRef100_D5LFT3,UniRef:UniRef50_Q2FWM7,UniRef:UniRef90_Q2FWM7;ec_number=3.4.-.-
contig_1	Pyrodigal	gene	2152164	2152304	.	+	.	ID=GCA000560365_02121_gene;locus_tag=GCA000560365_02121;gene=agrD
contig_1	Pyrodigal	CDS	2152164	2152304	.	+	0	ID=GCA000560365_02121;Name=AgrD;locus_tag=GCA000560365_02121;product=AgrD;gene=agrD;Parent=GCA000560365_02121_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001093929.1,SO:0001217,UniParc:UPI0000054241,UniRef:UniRef100_Q2FWM6,UniRef:UniRef50_Q2FWM6,UniRef:UniRef90_Q2FWM6
contig_1	Pyrodigal	gene	2152329	2153621	.	+	.	ID=GCA000560365_02122_gene;locus_tag=GCA000560365_02122;gene=agrC
contig_1	Pyrodigal	CDS	2152329	2153621	.	+	0	ID=GCA000560365_02122;Name=quorum-sensing sensor histidine kinase AgrC;locus_tag=GCA000560365_02122;product=quorum-sensing sensor histidine kinase AgrC;gene=agrC;Parent=GCA000560365_02122_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07706,RefSeq:WP_001549202.1,SO:0001217,UniParc:UPI00015FD6DC,UniRef:UniRef100_A0A1E8WWT6,UniRef:UniRef50_Q2FWM5,UniRef:UniRef90_Q2FWM5;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	2153640	2154356	.	+	.	ID=GCA000560365_02123_gene;locus_tag=GCA000560365_02123;gene=agrA
contig_1	Pyrodigal	CDS	2153640	2154356	.	+	0	ID=GCA000560365_02123;Name=quorum-sensing response regulator AgrA;locus_tag=GCA000560365_02123;product=quorum-sensing response regulator AgrA;Dbxref=GO:0000156,GO:0003677,GO:0005737;gene=agrA;Parent=GCA000560365_02123_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3279,COG:KT,KEGG:K07707,RefSeq:WP_000688492.1,SO:0001217,UniParc:UPI0000054244,UniRef:UniRef100_Q5HEG2,UniRef:UniRef50_Q5HMY2,UniRef:UniRef90_Q5HEG2
contig_1	Pyrodigal	gene	2154723	2155682	.	-	.	ID=GCA000560365_02124_gene;locus_tag=GCA000560365_02124;gene=rbsK
contig_1	Pyrodigal	CDS	2154723	2155682	.	-	0	ID=GCA000560365_02124;Name=Carbohydrate kinase;locus_tag=GCA000560365_02124;product=Carbohydrate kinase;gene=rbsK;Parent=GCA000560365_02124_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0524,COG:G,RefSeq:WP_001253312.1,SO:0001217,UniParc:UPI0000054247,UniRef:UniRef100_Q2FWM2,UniRef:UniRef50_A0A0Y9VKF8,UniRef:UniRef90_A0A0Y9VKF8
contig_1	Pyrodigal	gene	2155679	2157163	.	-	.	ID=GCA000560365_02125_gene;locus_tag=GCA000560365_02125;gene=sacC
contig_1	Pyrodigal	CDS	2155679	2157163	.	-	0	ID=GCA000560365_02125;Name=Sucrose-6-phosphate hydrolase;locus_tag=GCA000560365_02125;product=Sucrose-6-phosphate hydrolase;gene=sacC;Parent=GCA000560365_02125_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1621,COG:G,RefSeq:WP_000141414.1,SO:0001217,UniParc:UPI0000054248,UniRef:UniRef100_Q2FWM1,UniRef:UniRef50_Q05936,UniRef:UniRef90_A0A0H2WWU4
contig_1	Pyrodigal	gene	2157312	2158262	.	-	.	ID=GCA000560365_02126_gene;locus_tag=GCA000560365_02126;gene=purR
contig_1	Pyrodigal	CDS	2157312	2158262	.	-	0	ID=GCA000560365_02126;Name=Sucrose operon repressor%2C putative;locus_tag=GCA000560365_02126;product=Sucrose operon repressor%2C putative;gene=purR;Parent=GCA000560365_02126_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1609,COG:K,RefSeq:WP_000790330.1,SO:0001217,UniParc:UPI0000054249,UniRef:UniRef100_Q2FWM0,UniRef:UniRef50_P74892,UniRef:UniRef90_Q2FWM0
contig_1	Pyrodigal	gene	2158445	2159695	.	-	.	ID=GCA000560365_02127_gene;locus_tag=GCA000560365_02127;gene=amtB
contig_1	Pyrodigal	CDS	2158445	2159695	.	-	0	ID=GCA000560365_02127;Name=Ammonium transporter;locus_tag=GCA000560365_02127;product=Ammonium transporter;gene=amtB;Parent=GCA000560365_02127_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0004,COG:P,KEGG:K03320,RefSeq:WP_001052270.1,SO:0001217,UniParc:UPI00000CAA84,UniRef:UniRef100_Q2FWL9,UniRef:UniRef50_A0A0D0SEH5,UniRef:UniRef90_A0A113YTI9
contig_1	Pyrodigal	gene	2159903	2160127	.	-	.	ID=GCA000560365_02128_gene;locus_tag=GCA000560365_02128;gene=tusA
contig_1	Pyrodigal	CDS	2159903	2160127	.	-	0	ID=GCA000560365_02128;Name=UPF0033 domain-containing protein;locus_tag=GCA000560365_02128;product=UPF0033 domain-containing protein;gene=tusA;Parent=GCA000560365_02128_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0425,COG:JHO,RefSeq:WP_000581077.1,SO:0001217,UniParc:UPI00000D9F1B,UniRef:UniRef100_Q2FWL8,UniRef:UniRef50_A0A7U7JQM0,UniRef:UniRef90_A0A7U7JQM0
contig_1	Pyrodigal	gene	2160187	2161266	.	-	.	ID=GCA000560365_02129_gene;locus_tag=GCA000560365_02129;gene=yedE
contig_1	Pyrodigal	CDS	2160187	2161266	.	-	0	ID=GCA000560365_02129;Name=YeeE/YedE family protein;locus_tag=GCA000560365_02129;product=YeeE/YedE family protein;gene=yedE;Parent=GCA000560365_02129_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2391,COG:R,KEGG:K07112,RefSeq:WP_000266883.1,SO:0001217,UniParc:UPI000005424C,UniRef:UniRef100_Q2FWL7,UniRef:UniRef50_A0A7U7JQE1,UniRef:UniRef90_A0A9P2Z014
contig_1	Pyrodigal	gene	2161570	2162205	.	-	.	ID=GCA000560365_02130_gene;locus_tag=GCA000560365_02130;gene=rex
contig_1	Pyrodigal	CDS	2161570	2162205	.	-	0	ID=GCA000560365_02130;Name=redox-sensing transcriptional repressor Rex;locus_tag=GCA000560365_02130;product=redox-sensing transcriptional repressor Rex;Dbxref=GO:0003677,GO:0003700,GO:0005737,GO:0045892,GO:0051775;gene=rex;Parent=GCA000560365_02130_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2344,COG:K,KEGG:K01926,RefSeq:WP_001283612.1,SO:0001217,UniParc:UPI000005424D,UniRef:UniRef100_Q2FWL6,UniRef:UniRef50_Q2FWL6,UniRef:UniRef90_Q2FWL6
contig_1	Pyrodigal	gene	2162458	2164386	.	+	.	ID=GCA000560365_02131_gene;locus_tag=GCA000560365_02131;gene=abc-f
contig_1	Pyrodigal	CDS	2162458	2164386	.	+	0	ID=GCA000560365_02131;Name=ribosomal protection-like ABC-F family protein;locus_tag=GCA000560365_02131;product=ribosomal protection-like ABC-F family protein;Dbxref=GO:0003677,GO:0005524,GO:0016887;gene=abc-f;Parent=GCA000560365_02131_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0488,COG:R,RefSeq:WP_000602049.1,SO:0001217,UniParc:UPI0000696CA7,UniRef:UniRef100_A0A1S6CRE2,UniRef:UniRef50_A0A131I335,UniRef:UniRef90_A0A131I335
contig_1	Pyrodigal	gene	2164747	2166357	.	+	.	ID=GCA000560365_02132_gene;locus_tag=GCA000560365_02132;gene=mutS
contig_1	Pyrodigal	CDS	2164747	2166357	.	+	0	ID=GCA000560365_02132;Name=MutS domain V protein;locus_tag=GCA000560365_02132;product=MutS domain V protein;gene=mutS;Parent=GCA000560365_02132_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0249,COG:L,RefSeq:WP_000106330.1,SO:0001217,UniParc:UPI000005424F,UniRef:UniRef100_Q2FWL3,UniRef:UniRef50_G5JKS6,UniRef:UniRef90_Q2FWL3
contig_1	Pyrodigal	gene	2166459	2167484	.	-	.	ID=GCA000560365_02133_gene;locus_tag=GCA000560365_02133;gene=tsaD
contig_1	Pyrodigal	CDS	2166459	2167484	.	-	0	ID=GCA000560365_02133;Name=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;locus_tag=GCA000560365_02133;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;Dbxref=GO:0002949,GO:0005506,GO:0005737,GO:0061711;gene=tsaD;Parent=GCA000560365_02133_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0533,COG:J,RefSeq:WP_000159034.1,SO:0001217,UniParc:UPI0000054250,UniRef:UniRef100_Q2FWL2,UniRef:UniRef50_Q2FWL2,UniRef:UniRef90_Q2FWL2;ec_number=2.3.1.234
contig_1	Pyrodigal	gene	2167477	2167941	.	-	.	ID=GCA000560365_02134_gene;locus_tag=GCA000560365_02134;gene=rimI
contig_1	Pyrodigal	CDS	2167477	2167941	.	-	0	ID=GCA000560365_02134;Name=ribosomal protein S18-alanine N-acetyltransferase;locus_tag=GCA000560365_02134;product=ribosomal protein S18-alanine N-acetyltransferase;Dbxref=GO:0008999,GO:0036211,GO:0042254;gene=rimI;Parent=GCA000560365_02134_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0456,COG:J,RefSeq:WP_000372758.1,SO:0001217,UniParc:UPI00000CAA0A,UniRef:UniRef100_A0A0D6HBI8,UniRef:UniRef50_A0A855GHV1,UniRef:UniRef90_A0A7U7PW89;ec_number=2.3.1.266
contig_1	Pyrodigal	gene	2167914	2168576	.	-	.	ID=GCA000560365_02135_gene;locus_tag=GCA000560365_02135;gene=tsaB
contig_1	Pyrodigal	CDS	2167914	2168576	.	-	0	ID=GCA000560365_02135;Name=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;locus_tag=GCA000560365_02135;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;Dbxref=GO:0002949;gene=tsaB;Parent=GCA000560365_02135_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1214,COG:J,RefSeq:WP_001086744.1,SO:0001217,UniParc:UPI00004B5C6D,UniRef:UniRef100_Q2FWL0,UniRef:UniRef50_A0AAE2ZX37,UniRef:UniRef90_A0AAE2ZX37;ec_number=2.3.1.234
contig_1	Pyrodigal	gene	2168557	2169051	.	-	.	ID=GCA000560365_02136_gene;locus_tag=GCA000560365_02136;gene=tsaE
contig_1	Pyrodigal	CDS	2168557	2169051	.	-	0	ID=GCA000560365_02136;Name=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;locus_tag=GCA000560365_02136;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;Dbxref=GO:0002949;gene=tsaE;Parent=GCA000560365_02136_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0802,COG:J,SO:0001217,UniParc:UPI0000054254,UniRef:UniRef100_Q2FWK9,UniRef:UniRef50_A0A0D1JSJ2,UniRef:UniRef90_A0A0D1JSJ2
contig_1	Infernal	gene	2169220	2169424	.	+	.	ID=GCA000560365_02137_gene;locus_tag=GCA000560365_02137;gene=rli60
contig_1	Infernal	ncRNA	2169220	2169424	1.3e-17	+	.	ID=GCA000560365_02137;Name=Listeria sRNA rli60;locus_tag=GCA000560365_02137;product=Listeria sRNA rli60;Dbxref=RFAM:RF02414;Parent=GCA000560365_02137_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02414
contig_1	Pyrodigal	gene	2169529	2171217	.	+	.	ID=GCA000560365_02138_gene;locus_tag=GCA000560365_02138;gene=ilvD
contig_1	Pyrodigal	CDS	2169529	2171217	.	+	0	ID=GCA000560365_02138;Name=dihydroxy-acid dehydratase;locus_tag=GCA000560365_02138;product=dihydroxy-acid dehydratase;Dbxref=GO:0000287,GO:0004160,GO:0005829,GO:0009082,GO:0009097,GO:0009099,GO:0051536,GO:0051537;gene=ilvD;Parent=GCA000560365_02138_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0129,COG:EG,KEGG:K01687,RefSeq:WP_001255791.1,SO:0001217,UniParc:UPI0000696CA8,UniRef:UniRef100_Q2FF71,UniRef:UniRef50_Q2FWK7,UniRef:UniRef90_Q2FWK7;ec_number=4.2.1.9
contig_1	Pyrodigal	gene	2171245	2173014	.	+	.	ID=GCA000560365_02139_gene;locus_tag=GCA000560365_02139;gene=ilvB
contig_1	Pyrodigal	CDS	2171245	2173014	.	+	0	ID=GCA000560365_02139;Name=biosynthetic-type acetolactate synthase large subunit;locus_tag=GCA000560365_02139;product=biosynthetic-type acetolactate synthase large subunit;Dbxref=GO:0000287,GO:0003984,GO:0009082,GO:0030976,GO:0050660;gene=ilvB;Parent=GCA000560365_02139_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0028,COG:EH,KEGG:K01652,RefSeq:WP_000047820.1,SO:0001217,UniParc:UPI00004B5C70,UniRef:UniRef100_Q2FWK6,UniRef:UniRef50_Q02137,UniRef:UniRef90_A0A0E1XAU7;ec_number=2.2.1.6
contig_1	Pyrodigal	gene	2173014	2173268	.	+	.	ID=GCA000560365_02140_gene;locus_tag=GCA000560365_02140;gene=ilvH
contig_1	Pyrodigal	CDS	2173014	2173268	.	+	0	ID=GCA000560365_02140;Name=ACT domain-containing protein;locus_tag=GCA000560365_02140;product=ACT domain-containing protein;gene=ilvH;Parent=GCA000560365_02140_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0440,COG:E,KEGG:K01653,RefSeq:WP_000196911.1,SO:0001217,UniParc:UPI0000054257,UniRef:UniRef100_Q2FWK5,UniRef:UniRef50_A0A7Z8E1T8,UniRef:UniRef90_Q2FWK5;ec_number=2.2.1.6
contig_1	Pyrodigal	gene	2173405	2174409	.	+	.	ID=GCA000560365_02141_gene;locus_tag=GCA000560365_02141;gene=ilvC
contig_1	Pyrodigal	CDS	2173405	2174409	.	+	0	ID=GCA000560365_02141;Name=ketol-acid reductoisomerase;locus_tag=GCA000560365_02141;product=ketol-acid reductoisomerase;Dbxref=GO:0000287,GO:0004455,GO:0005829,GO:0009097,GO:0009099,GO:0050661;gene=ilvC;Parent=GCA000560365_02141_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0059,COG:EH,KEGG:K00053,RefSeq:WP_000214557.1,SO:0001217,UniParc:UPI00004B5C71,UniRef:UniRef100_Q2FWK4,UniRef:UniRef50_Q58938,UniRef:UniRef90_Q2FWK4;ec_number=1.1.1.86
contig_1	Pyrodigal	gene	2174439	2175968	.	+	.	ID=GCA000560365_02142_gene;locus_tag=GCA000560365_02142;gene=leuA
contig_1	Pyrodigal	CDS	2174439	2175968	.	+	0	ID=GCA000560365_02142;Name=2-isopropylmalate synthase;locus_tag=GCA000560365_02142;product=2-isopropylmalate synthase;Dbxref=GO:0003852,GO:0003985,GO:0005737,GO:0009098,GO:0030145;gene=leuA;Parent=GCA000560365_02142_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0119,COG:E,KEGG:K01649,RefSeq:WP_000094576.1,SO:0001217,UniParc:UPI00004B5C72,UniRef:UniRef100_Q2FWK3,UniRef:UniRef50_P94565,UniRef:UniRef90_Q2FWK3;ec_number=2.3.3.13
contig_1	Pyrodigal	gene	2175971	2177017	.	+	.	ID=GCA000560365_02143_gene;locus_tag=GCA000560365_02143;gene=leuB
contig_1	Pyrodigal	CDS	2175971	2177017	.	+	0	ID=GCA000560365_02143;Name=3-isopropylmalate dehydrogenase;locus_tag=GCA000560365_02143;product=3-isopropylmalate dehydrogenase;Dbxref=GO:0000287,GO:0003862,GO:0005829,GO:0009098,GO:0051287;gene=leuB;Parent=GCA000560365_02143_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CE,COG:COG0473,KEGG:K00052,RefSeq:WP_000221958.1,SO:0001217,UniParc:UPI00004B5C73,UniRef:UniRef100_Q2FF66,UniRef:UniRef50_P12010,UniRef:UniRef90_Q2FWK2;ec_number=1.1.1.85
contig_1	Pyrodigal	gene	2177031	2178401	.	+	.	ID=GCA000560365_02144_gene;locus_tag=GCA000560365_02144;gene=leuC
contig_1	Pyrodigal	CDS	2177031	2178401	.	+	0	ID=GCA000560365_02144;Name=3-isopropylmalate dehydratase large subunit;locus_tag=GCA000560365_02144;product=3-isopropylmalate dehydratase large subunit;Dbxref=GO:0003861,GO:0009098,GO:0046872,GO:0051539;gene=leuC;Parent=GCA000560365_02144_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0065,COG:E,KEGG:K01703,RefSeq:WP_000531823.1,SO:0001217,UniParc:UPI000005425B,UniRef:UniRef100_Q2FWK1,UniRef:UniRef50_P80858,UniRef:UniRef90_Q2FWK1;ec_number=4.2.1.33
contig_1	Pyrodigal	gene	2178402	2178974	.	+	.	ID=GCA000560365_02145_gene;locus_tag=GCA000560365_02145;gene=leuD
contig_1	Pyrodigal	CDS	2178402	2178974	.	+	0	ID=GCA000560365_02145;Name=3-isopropylmalate dehydratase small subunit;locus_tag=GCA000560365_02145;product=3-isopropylmalate dehydratase small subunit;Dbxref=GO:0003861,GO:0009098,GO:0009316;gene=leuD;Parent=GCA000560365_02145_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0066,COG:E,RefSeq:WP_000718955.1,SO:0001217,UniParc:UPI000005425E,UniRef:UniRef100_Q2FWK0,UniRef:UniRef50_Q8Y5R6,UniRef:UniRef90_Q2FWK0;ec_number=4.2.1.33
contig_1	Pyrodigal	gene	2178989	2180257	.	+	.	ID=GCA000560365_02146_gene;locus_tag=GCA000560365_02146;gene=ilvA
contig_1	Pyrodigal	CDS	2178989	2180257	.	+	0	ID=GCA000560365_02146;Name=threonine ammonia-lyase IlvA;locus_tag=GCA000560365_02146;product=threonine ammonia-lyase IlvA;Dbxref=GO:0003941,GO:0004794,GO:0006520,GO:0006565,GO:0006566,GO:0006567,GO:0009097,GO:0030170;gene=ilvA;Parent=GCA000560365_02146_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1171,COG:E,RefSeq:WP_000216853.1,SO:0001217,UniParc:UPI00004B5C74,UniRef:UniRef100_Q2FWJ9,UniRef:UniRef50_P37946,UniRef:UniRef90_Q2FWJ9;ec_number=4.3.1.19
contig_1	Infernal	gene	2180467	2180581	.	-	.	ID=GCA000560365_02147_gene;locus_tag=GCA000560365_02147;gene=rrf
contig_1	Infernal	rRNA	2180467	2180581	1.1e-14	-	.	ID=GCA000560365_02147;Name=5S ribosomal RNA;locus_tag=GCA000560365_02147;gene=rrf;product=5S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00001;Parent=GCA000560365_02147_gene;Note=KEGG:K01985,SO:0000652;inference=profile:Rfam:RF00001
contig_1	Infernal	gene	2180654	2183576	.	-	.	ID=GCA000560365_02148_gene;locus_tag=GCA000560365_02148;gene=rrl
contig_1	Infernal	rRNA	2180654	2183576	1.4e-06	-	.	ID=GCA000560365_02148;Name=23S ribosomal RNA;locus_tag=GCA000560365_02148;gene=rrl;product=23S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF02541;Parent=GCA000560365_02148_gene;Note=KEGG:K01980,SO:0001001;inference=profile:Rfam:RF02541
contig_1	Infernal	gene	2183881	2185432	.	-	.	ID=GCA000560365_02149_gene;locus_tag=GCA000560365_02149;gene=rrs
contig_1	Infernal	rRNA	2183881	2185432	1.4e-49	-	.	ID=GCA000560365_02149;Name=16S ribosomal RNA;locus_tag=GCA000560365_02149;gene=rrs;product=16S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00177;Parent=GCA000560365_02149_gene;Note=KEGG:K01977,SO:0001000;inference=profile:Rfam:RF00177
contig_1	tRNAscan-SE	gene	2185551	2185624	.	-	.	ID=GCA000560365_02150_gene;locus_tag=GCA000560365_02150;gene=trnG
contig_1	tRNAscan-SE	tRNA	2185551	2185624	.	-	.	ID=GCA000560365_02150;Name=tRNA-Gly(tcc);locus_tag=GCA000560365_02150;product=tRNA-Gly(tcc);gene=trnG;anti_codon=tcc;amino_acid=Gly;Parent=GCA000560365_02150_gene;inference=profile:tRNAscan:2.0;Note=SO:0000260
contig_1	tRNAscan-SE	gene	2185647	2185729	.	-	.	ID=GCA000560365_02151_gene;locus_tag=GCA000560365_02151;gene=trnL
contig_1	tRNAscan-SE	tRNA	2185647	2185729	.	-	.	ID=GCA000560365_02151;Name=tRNA-Leu(gag);locus_tag=GCA000560365_02151;product=tRNA-Leu(gag);gene=trnL;anti_codon=gag;amino_acid=Leu;Parent=GCA000560365_02151_gene;inference=profile:tRNAscan:2.0;Note=SO:0000264
contig_1	Pyrodigal	gene	2186376	2186831	.	-	.	ID=GCA000560365_02152_gene;locus_tag=GCA000560365_02152;gene=sprT
contig_1	Pyrodigal	CDS	2186376	2186831	.	-	0	ID=GCA000560365_02152;Name=SprT family protein;locus_tag=GCA000560365_02152;product=SprT family protein;Dbxref=GO:0005737,GO:0008270,GO:0033554;gene=sprT;Parent=GCA000560365_02152_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3091,COG:R,RefSeq:WP_001058111.1,SO:0001217,UniParc:UPI00000D7726,UniRef:UniRef100_Q2FWJ6,UniRef:UniRef50_Q8Y8K2,UniRef:UniRef90_Q2FWJ6
contig_1	Pyrodigal	gene	2186824	2188962	.	-	.	ID=GCA000560365_02153_gene;locus_tag=GCA000560365_02153;gene=tex
contig_1	Pyrodigal	CDS	2186824	2188962	.	-	0	ID=GCA000560365_02153;Name=S1 motif domain-containing protein;locus_tag=GCA000560365_02153;product=S1 motif domain-containing protein;gene=tex;Parent=GCA000560365_02153_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2183,COG:K,KEGG:K06959,SO:0001217,UniParc:UPI0002CAED2A,UniRef:UniRef100_A0A2X3PSQ1,UniRef:UniRef50_A0A1M6SVE8,UniRef:UniRef90_A0A0H3JYF6
contig_1	Pyrodigal	gene	2189408	2190178	.	-	.	ID=GCA000560365_02154_gene;locus_tag=GCA000560365_02154;gene=sigB
contig_1	Pyrodigal	CDS	2189408	2190178	.	-	0	ID=GCA000560365_02154;Name=RNA polymerase sigma factor SigB;locus_tag=GCA000560365_02154;product=RNA polymerase sigma factor SigB;Dbxref=GO:0003700,GO:0006352,GO:0016987;gene=sigB;Parent=GCA000560365_02154_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1191,COG:K,KEGG:K03090,RefSeq:WP_001041103.1,SO:0001217,UniParc:UPI00000545BC,UniRef:UniRef100_Q2FWJ4,UniRef:UniRef50_P06574,UniRef:UniRef90_A0A390QYZ6
contig_1	Pyrodigal	gene	2190153	2190632	.	-	.	ID=GCA000560365_02155_gene;locus_tag=GCA000560365_02155;gene=rsbW
contig_1	Pyrodigal	CDS	2190153	2190632	.	-	0	ID=GCA000560365_02155;Name=anti-sigma B factor RsbW;locus_tag=GCA000560365_02155;product=anti-sigma B factor RsbW;Dbxref=GO:0004674,GO:0004676,GO:0004677,GO:0004679,GO:0004711,GO:0005524,GO:0006468,GO:0016989,GO:0035175,GO:0035402,GO:0035403,GO:0035979,GO:0044022,GO:0044023,GO:0044024,GO:0044025,GO:0045892,GO:0072354,GO:0072371,GO:0072518,GO:0106310,GO:0140823,GO:0140855,GO:0140857,GO:1990244;gene=rsbW;Parent=GCA000560365_02155_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2172,COG:T,RefSeq:WP_001190829.1,SO:0001217,UniParc:UPI00000D4737,UniRef:UniRef100_Q2FWJ3,UniRef:UniRef50_P17904,UniRef:UniRef90_Q2FWJ3;ec_number=2.7.11.1
contig_1	Pyrodigal	gene	2190634	2190960	.	-	.	ID=GCA000560365_02156_gene;locus_tag=GCA000560365_02156;gene=rsbV
contig_1	Pyrodigal	CDS	2190634	2190960	.	-	0	ID=GCA000560365_02156;Name=Anti-sigma-B factor antagonist;locus_tag=GCA000560365_02156;product=Anti-sigma-B factor antagonist;Dbxref=GO:0043856;gene=rsbV;Parent=GCA000560365_02156_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5815,COG:DT,RefSeq:WP_001052491.1,SO:0001217,UniParc:UPI00000545BE,UniRef:UniRef100_P60070,UniRef:UniRef50_P60070,UniRef:UniRef90_P60070
contig_1	Pyrodigal	gene	2191079	2192080	.	-	.	ID=GCA000560365_02157_gene;locus_tag=GCA000560365_02157;gene=rsbU
contig_1	Pyrodigal	CDS	2191079	2192080	.	-	0	ID=GCA000560365_02157;Name=RsbU;locus_tag=GCA000560365_02157;product=RsbU;gene=rsbU;Parent=GCA000560365_02157_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2208,COG:TK,RefSeq:WP_000390829.1,SO:0001217,UniParc:UPI00000D76B3,UniRef:UniRef100_A0A7Z7R0V7,UniRef:UniRef50_S2XRQ7,UniRef:UniRef90_A0A2K4AFK3
contig_1	Pyrodigal	gene	2192430	2192792	.	-	.	ID=GCA000560365_02158_gene;locus_tag=GCA000560365_02158;gene=mazF
contig_1	Pyrodigal	CDS	2192430	2192792	.	-	0	ID=GCA000560365_02158;Name=Endoribonuclease MazF;locus_tag=GCA000560365_02158;product=Endoribonuclease MazF;Dbxref=GO:0003677,GO:0003723,GO:0004521,GO:0006402,GO:0016075;gene=mazF;Parent=GCA000560365_02158_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2337,COG:V,RefSeq:WP_000621175.1,SO:0001217,UniParc:UPI00000545C1,UniRef:UniRef100_Q2FWI8,UniRef:UniRef50_Q2FWI8,UniRef:UniRef90_Q2FWI8;ec_number=3.1.-.-
contig_1	Pyrodigal	gene	2192789	2192959	.	-	.	ID=GCA000560365_02159_gene;locus_tag=GCA000560365_02159;gene=mazE
contig_1	Pyrodigal	CDS	2192789	2192959	.	-	0	ID=GCA000560365_02159;Name=type II toxin-antitoxin system antitoxin MazE;locus_tag=GCA000560365_02159;product=type II toxin-antitoxin system antitoxin MazE;Dbxref=GO:0006355;gene=mazE;Parent=GCA000560365_02159_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000948331,BlastRules:WP_001829931,BlastRules:WP_011275271,BlastRules:WP_011302702,RefSeq:WP_000948331.1,SO:0001217,UniParc:UPI00000D780C,UniRef:UniRef100_Q2FWI7,UniRef:UniRef50_Q2FWI7,UniRef:UniRef90_Q2FWI7
contig_1	Pyrodigal	gene	2193044	2194192	.	-	.	ID=GCA000560365_02160_gene;locus_tag=GCA000560365_02160;gene=alr
contig_1	Pyrodigal	CDS	2193044	2194192	.	-	0	ID=GCA000560365_02160;Name=alanine racemase;locus_tag=GCA000560365_02160;product=alanine racemase;Dbxref=GO:0005829,GO:0006522,GO:0008784,GO:0009252,GO:0030170,GO:0030632;gene=alr;Parent=GCA000560365_02160_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0787,COG:M,KEGG:K01775,RefSeq:WP_001281145.1,SO:0001217,UniParc:UPI00001258C9,UniRef:UniRef100_Q9ZAH5,UniRef:UniRef50_P63479,UniRef:UniRef90_P63479;ec_number=5.1.1.1
contig_1	Pyrodigal	gene	2194258	2194617	.	-	.	ID=GCA000560365_02161_gene;locus_tag=GCA000560365_02161;gene=acpS
contig_1	Pyrodigal	CDS	2194258	2194617	.	-	0	ID=GCA000560365_02161;Name=Holo-[acyl-carrier-protein] synthase;locus_tag=GCA000560365_02161;product=Holo-[acyl-carrier-protein] synthase;Dbxref=GO:0000287,GO:0005737,GO:0006633,GO:0008897;gene=acpS;Parent=GCA000560365_02161_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0736,COG:I,RefSeq:WP_000581200.1,SO:0001217,UniParc:UPI00000545C5,UniRef:UniRef100_Q9ZAH6,UniRef:UniRef50_Q9ZAH6,UniRef:UniRef90_Q9ZAH6;ec_number=2.7.8.7
contig_1	Pyrodigal	gene	2194621	2195115	.	-	.	ID=GCA000560365_02162_gene;locus_tag=GCA000560365_02162;gene=ydbS
contig_1	Pyrodigal	CDS	2194621	2195115	.	-	0	ID=GCA000560365_02162;Name=YdbS-like PH domain-containing protein;locus_tag=GCA000560365_02162;product=YdbS-like PH domain-containing protein;gene=ydbS;Parent=GCA000560365_02162_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3402,COG:S,SO:0001217,UniParc:UPI00000BE51F,UniRef:UniRef100_Q2FWI4,UniRef:UniRef50_Q2FWI4,UniRef:UniRef90_Q2FWI4
contig_1	Pyrodigal	gene	2195099	2196682	.	-	.	ID=GCA000560365_02163_gene;locus_tag=GCA000560365_02163;gene=ydbT
contig_1	Pyrodigal	CDS	2195099	2196682	.	-	0	ID=GCA000560365_02163;Name=YdbS-like PH domain-containing protein;locus_tag=GCA000560365_02163;product=YdbS-like PH domain-containing protein;gene=ydbT;Parent=GCA000560365_02163_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3428,COG:S,KEGG:K08981,RefSeq:WP_001294626.1,SO:0001217,UniParc:UPI00000D77B0,UniRef:UniRef100_Q2FWI3,UniRef:UniRef50_A0A2K4AEP0,UniRef:UniRef90_Q2FWI3
contig_1	Pyrodigal	gene	2196675	2197154	.	-	.	ID=GCA000560365_02164_gene;locus_tag=GCA000560365_02164;gene=ydbS
contig_1	Pyrodigal	CDS	2196675	2197154	.	-	0	ID=GCA000560365_02164;Name=YdbS-like PH domain-containing protein;locus_tag=GCA000560365_02164;product=YdbS-like PH domain-containing protein;gene=ydbS;Parent=GCA000560365_02164_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3402,COG:S,RefSeq:WP_001287088.1,SO:0001217,UniParc:UPI00000545C8,UniRef:UniRef100_Q2FWI2,UniRef:UniRef50_Q2FWI2,UniRef:UniRef90_Q2FWI2
contig_1	Pyrodigal	gene	2197362	2197922	.	-	.	ID=GCA000560365_02165_gene;locus_tag=GCA000560365_02165;gene=kdpC
contig_1	Pyrodigal	CDS	2197362	2197922	.	-	0	ID=GCA000560365_02165;Name=K(+)-transporting ATPase subunit C;locus_tag=GCA000560365_02165;product=K(+)-transporting ATPase subunit C;Dbxref=GO:0005524,GO:0005886,GO:0008556,GO:0071805;gene=kdpC;Parent=GCA000560365_02165_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2156,COG:P,RefSeq:WP_001092411.1,SO:0001217,UniParc:UPI00000CADC0,UniRef:UniRef100_Q2FWI1,UniRef:UniRef50_Q2FWI1,UniRef:UniRef90_Q2FWI1
contig_1	Pyrodigal	gene	2197942	2199969	.	-	.	ID=GCA000560365_02166_gene;locus_tag=GCA000560365_02166;gene=kdpB
contig_1	Pyrodigal	CDS	2197942	2199969	.	-	0	ID=GCA000560365_02166;Name=potassium-transporting ATPase subunit KdpB;locus_tag=GCA000560365_02166;product=potassium-transporting ATPase subunit KdpB;Dbxref=GO:0000287,GO:0005524,GO:0005886,GO:0006813,GO:0008556,GO:0016020,GO:0016887,GO:0031004;gene=kdpB;Parent=GCA000560365_02166_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2216,COG:P,RefSeq:WP_000546584.1,SO:0001217,UniParc:UPI00004B5C77,UniRef:UniRef100_Q5HEC4,UniRef:UniRef50_P63683,UniRef:UniRef90_P63683;ec_number=7.2.2.6
contig_1	Pyrodigal	gene	2199988	2201664	.	-	.	ID=GCA000560365_02167_gene;locus_tag=GCA000560365_02167;gene=kdpA
contig_1	Pyrodigal	CDS	2199988	2201664	.	-	0	ID=GCA000560365_02167;Name=potassium-transporting ATPase subunit KdpA;locus_tag=GCA000560365_02167;product=potassium-transporting ATPase subunit KdpA;Dbxref=GO:0005886,GO:0006813,GO:0008556,GO:0030955,GO:0031004;gene=kdpA;Parent=GCA000560365_02167_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2060,COG:P,KEGG:K01546,RefSeq:WP_000402656.1,SO:0001217,UniParc:UPI00004B5C78,UniRef:UniRef100_Q2FWH9,UniRef:UniRef50_Q2FWH9,UniRef:UniRef90_Q2FWH9;ec_number=7.2.2.6
contig_1	Pyrodigal	gene	2201936	2204593	.	+	.	ID=GCA000560365_02168_gene;locus_tag=GCA000560365_02168;gene=kdpD
contig_1	Pyrodigal	CDS	2201936	2204593	.	+	0	ID=GCA000560365_02168;Name=Sensor histidine kinase KdpD;locus_tag=GCA000560365_02168;product=Sensor histidine kinase KdpD;Dbxref=GO:0000155,GO:0005524,GO:0005886;gene=kdpD;Parent=GCA000560365_02168_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2205,COG:T,RefSeq:WP_000072278.1,SO:0001217,UniParc:UPI00000CA9CF,UniRef:UniRef100_Q2FWH7,UniRef:UniRef50_Q2FWH7,UniRef:UniRef90_Q2FWH7;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	2204593	2205288	.	+	.	ID=GCA000560365_02169_gene;locus_tag=GCA000560365_02169;gene=kdpE
contig_1	Pyrodigal	CDS	2204593	2205288	.	+	0	ID=GCA000560365_02169;Name=Transcriptional regulatory protein KdpE;locus_tag=GCA000560365_02169;product=Transcriptional regulatory protein KdpE;Dbxref=GO:0000156,GO:0000976,GO:0005829,GO:0006355,GO:0032993;gene=kdpE;Parent=GCA000560365_02169_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0745,COG:TK,RefSeq:WP_001190841.1,SO:0001217,UniParc:UPI00000545CE,UniRef:UniRef100_Q2FWH6,UniRef:UniRef50_Q2FWH6,UniRef:UniRef90_Q2FWH6
contig_1	Pyrodigal	gene	2205657	2207177	.	-	.	ID=GCA000560365_02170_gene;locus_tag=GCA000560365_02170;gene=cshA
contig_1	Pyrodigal	CDS	2205657	2207177	.	-	0	ID=GCA000560365_02170;Name=DEAD-box ATP-dependent RNA helicase CshA;locus_tag=GCA000560365_02170;product=DEAD-box ATP-dependent RNA helicase CshA;Dbxref=GO:0003689,GO:0003724,GO:0005524,GO:0005829,GO:0005840,GO:0006401,GO:0009409,GO:0010501,GO:0016887,GO:0033592,GO:0061775,GO:0140584,GO:0140665,GO:0140849;gene=cshA;Parent=GCA000560365_02170_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0513,COG:L,RefSeq:WP_001178942.1,SO:0001217,UniParc:UPI00000D7761,UniRef:UniRef100_Q2FWH5,UniRef:UniRef50_Q2FWH5,UniRef:UniRef90_Q2FWH5;ec_number=3.6.4.13
contig_1	Pyrodigal	gene	2207694	2209052	.	-	.	ID=GCA000560365_02171_gene;locus_tag=GCA000560365_02171;gene=murF
contig_1	Pyrodigal	CDS	2207694	2209052	.	-	0	ID=GCA000560365_02171;Name=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;locus_tag=GCA000560365_02171;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;Dbxref=GO:0005524,GO:0005737,GO:0008360,GO:0008766,GO:0009252,GO:0047480,GO:0051301,GO:0071555;gene=murF;Parent=GCA000560365_02171_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0770,COG:M,KEGG:K01929,RefSeq:WP_000611462.1,SO:0001217,UniParc:UPI0000696CAB,UniRef:UniRef100_A0A0E8J639,UniRef:UniRef50_Q2FWH4,UniRef:UniRef90_Q2FWH4;ec_number=6.3.2.10
contig_1	Pyrodigal	gene	2209067	2210137	.	-	.	ID=GCA000560365_02172_gene;locus_tag=GCA000560365_02172;gene=ddl
contig_1	Pyrodigal	CDS	2209067	2210137	.	-	0	ID=GCA000560365_02172;Name=D-alanine--D-alanine ligase;locus_tag=GCA000560365_02172;product=D-alanine--D-alanine ligase;Dbxref=GO:0005524,GO:0005829,GO:0008360,GO:0008716,GO:0009252,GO:0046872,GO:0071555;gene=ddl;Parent=GCA000560365_02172_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1181,COG:MR,RefSeq:WP_000159631.1,SO:0001217,UniParc:UPI00001290BE,UniRef:UniRef100_Q2FWH3,UniRef:UniRef50_Q8NVH8,UniRef:UniRef90_Q8NVH8;ec_number=6.3.2.4
contig_1	Pyrodigal	gene	2210455	2211657	.	+	.	ID=GCA000560365_02173_gene;locus_tag=GCA000560365_02173;gene=ftsW
contig_1	Pyrodigal	CDS	2210455	2211657	.	+	0	ID=GCA000560365_02173;Name=Rod shape-determining protein RodA;locus_tag=GCA000560365_02173;product=Rod shape-determining protein RodA;gene=ftsW;Parent=GCA000560365_02173_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0772,COG:D,KEGG:K05837,RefSeq:WP_001109939.1,SO:0001217,UniParc:UPI00000545D2,UniRef:UniRef100_Q2FWH2,UniRef:UniRef50_Q2FWH2,UniRef:UniRef90_Q2FWH2
contig_1	Pyrodigal	gene	2211921	2212058	.	-	.	ID=GCA000560365_02174_gene;locus_tag=GCA000560365_02174
contig_1	Pyrodigal	CDS	2211921	2212058	.	-	0	ID=GCA000560365_02174;Name=Lmo0850 family protein;locus_tag=GCA000560365_02174;product=Lmo0850 family protein;Parent=GCA000560365_02174_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000828354.1,SO:0001217,UniParc:UPI00000D7764,UniRef:UniRef100_Q2FWH1,UniRef:UniRef50_A0A0H2VHK0,UniRef:UniRef90_Q2FWH1
contig_1	Pyrodigal	gene	2212186	2212395	.	-	.	ID=GCA000560365_02175_gene;locus_tag=GCA000560365_02175;gene=csoZ
contig_1	Pyrodigal	CDS	2212186	2212395	.	-	0	ID=GCA000560365_02175;Name=putative copper chaperone CsoZ;locus_tag=GCA000560365_02175;product=putative copper chaperone CsoZ;gene=csoZ;Parent=GCA000560365_02175_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000581792.1,SO:0001217,UniParc:UPI00000545D4,UniRef:UniRef100_Q2FWH0,UniRef:UniRef50_Q2FWH0,UniRef:UniRef90_Q2FWH0
contig_1	Pyrodigal	gene	2212407	2212700	.	-	.	ID=GCA000560365_02176_gene;locus_tag=GCA000560365_02176;gene=csoR
contig_1	Pyrodigal	CDS	2212407	2212700	.	-	0	ID=GCA000560365_02176;Name=copper-sensing transcriptional repressor CsoR;locus_tag=GCA000560365_02176;product=copper-sensing transcriptional repressor CsoR;gene=csoR;Parent=GCA000560365_02176_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000138932,COG:COG1937,COG:K,KEGG:K21600,RefSeq:WP_000138932.1,SO:0001217,UniParc:UPI00000D7670,UniRef:UniRef100_Q2FWG9,UniRef:UniRef50_K9AII0,UniRef:UniRef90_Q2FWG9
contig_1	Pyrodigal	gene	2212866	2214350	.	+	.	ID=GCA000560365_02177_gene;locus_tag=GCA000560365_02177;gene=cls
contig_1	Pyrodigal	CDS	2212866	2214350	.	+	0	ID=GCA000560365_02177;Name=cardiolipin synthase Cls;locus_tag=GCA000560365_02177;product=cardiolipin synthase Cls;Dbxref=GO:0005886,GO:0008808,GO:0016780,GO:0032049;gene=cls;Parent=GCA000560365_02177_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1502,COG:I,KEGG:K06131,RefSeq:WP_000571549.1,SO:0001217,UniParc:UPI00000D778F,UniRef:UniRef100_Q5HEB2,UniRef:UniRef50_Q8Y4E3,UniRef:UniRef90_Q5HEB2;ec_number=2.7.8.-
contig_1	Pyrodigal	gene	2214378	2215025	.	+	.	ID=GCA000560365_02178_gene;locus_tag=GCA000560365_02178;gene=rnaY
contig_1	Pyrodigal	CDS	2214378	2215025	.	+	0	ID=GCA000560365_02178;Name=HD domain-containing protein;locus_tag=GCA000560365_02178;product=HD domain-containing protein;gene=rnaY;Parent=GCA000560365_02178_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1418,COG:JR,KEGG:K06950,RefSeq:WP_001187629.1,SO:0001217,UniParc:UPI00004B5C7B,UniRef:UniRef100_Q2FWG7,UniRef:UniRef50_Q2FWG7,UniRef:UniRef90_Q2FWG7
contig_1	Pyrodigal	gene	2215838	2216710	.	-	.	ID=GCA000560365_02179_gene;locus_tag=GCA000560365_02179;gene=yidC
contig_1	Pyrodigal	CDS	2215838	2216710	.	-	0	ID=GCA000560365_02179;Name=Membrane protein insertase YidC;locus_tag=GCA000560365_02179;product=Membrane protein insertase YidC;Dbxref=GO:0005886,GO:0015031,GO:0032977,GO:0051205;gene=yidC;Parent=GCA000560365_02179_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0706,COG:M,KEGG:K03217,RefSeq:WP_000725802.1,SO:0001217,UniParc:UPI00000522A6,UniRef:UniRef100_Q2FWG4,UniRef:UniRef50_Q8CMK8,UniRef:UniRef90_Q2FWG4
contig_1	Pyrodigal	gene	2216796	2217437	.	-	.	ID=GCA000560365_02180_gene;locus_tag=GCA000560365_02180;gene=thiE
contig_1	Pyrodigal	CDS	2216796	2217437	.	-	0	ID=GCA000560365_02180;Name=Thiamine-phosphate synthase;locus_tag=GCA000560365_02180;product=Thiamine-phosphate synthase;Dbxref=GO:0000287,GO:0004789,GO:0005737,GO:0009228,GO:0009229;gene=thiE;Parent=GCA000560365_02180_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0352,COG:H,RefSeq:WP_000483153.1,SO:0001217,UniParc:UPI0000136DDF,UniRef:UniRef100_Q2FWG3,UniRef:UniRef50_Q5HMD0,UniRef:UniRef90_Q2FWG3;ec_number=2.5.1.3
contig_1	Pyrodigal	gene	2217439	2218230	.	-	.	ID=GCA000560365_02181_gene;locus_tag=GCA000560365_02181;gene=thiM
contig_1	Pyrodigal	CDS	2217439	2218230	.	-	0	ID=GCA000560365_02181;Name=hydroxyethylthiazole kinase;locus_tag=GCA000560365_02181;product=hydroxyethylthiazole kinase;Dbxref=GO:0000287,GO:0004417,GO:0005524,GO:0009228,GO:0009229;gene=thiM;Parent=GCA000560365_02181_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2145,COG:H,RefSeq:WP_001108479.1,SO:0001217,UniParc:UPI00000545DE,UniRef:UniRef100_Q2FWG2,UniRef:UniRef50_Q6GEY3,UniRef:UniRef90_Q6GEY3;ec_number=2.7.1.50
contig_1	Pyrodigal	gene	2218214	2219044	.	-	.	ID=GCA000560365_02182_gene;locus_tag=GCA000560365_02182;gene=thiD
contig_1	Pyrodigal	CDS	2218214	2219044	.	-	0	ID=GCA000560365_02182;Name=Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase;locus_tag=GCA000560365_02182;product=Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase;Dbxref=GO:0005524,GO:0005829,GO:0008902,GO:0008972,GO:0009228,GO:0009229;gene=thiD;Parent=GCA000560365_02182_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0351,COG:H,RefSeq:WP_000594959.1,SO:0001217,UniParc:UPI00000545DF,UniRef:UniRef100_Q2FWG1,UniRef:UniRef50_P66915,UniRef:UniRef90_P66915;ec_number=2.7.4.7
contig_1	Pyrodigal	gene	2219037	2219726	.	-	.	ID=GCA000560365_02183_gene;locus_tag=GCA000560365_02183;gene=tenA
contig_1	Pyrodigal	CDS	2219037	2219726	.	-	0	ID=GCA000560365_02183;Name=thiaminase II;locus_tag=GCA000560365_02183;product=thiaminase II;Dbxref=GO:0005829,GO:0006772,GO:0009228,GO:0009229,GO:0050334;gene=tenA;Parent=GCA000560365_02183_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0819,COG:H,RefSeq:WP_000396077.1,SO:0001217,UniParc:UPI00000D76DB,UniRef:UniRef100_Q2FF32,UniRef:UniRef50_Q6GEY1,UniRef:UniRef90_Q6GEY1;ec_number=3.5.99.2
contig_1	Infernal	regulatory_region	2219806	2219908	4.5e-13	-	.	ID=KMHODOBJJH_182;Name=TPP riboswitch aptamer (THI element);product=TPP riboswitch aptamer (THI element);Dbxref=RFAM:RF00059;inference=profile:Rfam:RF00059;Note=SO:0000035;regulatory_class=riboswitch
contig_1	Pyrodigal	gene	2220112	2220807	.	-	.	ID=GCA000560365_02184_gene;locus_tag=GCA000560365_02184;gene=sceD
contig_1	Pyrodigal	CDS	2220112	2220807	.	-	0	ID=GCA000560365_02184;Name=lytic transglycosylase SceD;locus_tag=GCA000560365_02184;product=lytic transglycosylase SceD;Dbxref=GO:0005576,GO:0016798;gene=sceD;Parent=GCA000560365_02184_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000752009,RefSeq:WP_000752008.1,SO:0001217,UniParc:UPI00000545E2,UniRef:UniRef100_Q2FWF8,UniRef:UniRef50_Q2FWF8,UniRef:UniRef90_Q2FWF8;ec_number=3.2.-.-
contig_1	Pyrodigal	gene	2221244	2221591	.	-	.	ID=GCA000560365_02185_gene;locus_tag=GCA000560365_02185;gene=ssb
contig_1	Pyrodigal	CDS	2221244	2221591	.	-	0	ID=GCA000560365_02185;Name=Single-stranded DNA-binding protein;locus_tag=GCA000560365_02185;product=Single-stranded DNA-binding protein;gene=ssb;Parent=GCA000560365_02185_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0629,COG:L,SO:0001217,UniParc:UPI0000696CAD,UniRef:UniRef100_Q2FWF7,UniRef:UniRef50_K9AX51,UniRef:UniRef90_A0A7U7PX14
contig_1	Pyrodigal	gene	2221785	2222225	.	+	.	ID=GCA000560365_02186_gene;locus_tag=GCA000560365_02186;gene=ywpF
contig_1	Pyrodigal	CDS	2221785	2222225	.	+	0	ID=GCA000560365_02186;Name=YwpF protein;locus_tag=GCA000560365_02186;product=YwpF protein;gene=ywpF;Parent=GCA000560365_02186_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000846746.1,SO:0001217,UniParc:UPI00000D77B6,UniRef:UniRef100_Q2FWF6,UniRef:UniRef50_Q2FWF6,UniRef:UniRef90_Q2FWF6
contig_1	Pyrodigal	gene	2222284	2222724	.	-	.	ID=GCA000560365_02187_gene;locus_tag=GCA000560365_02187;gene=fabZ
contig_1	Pyrodigal	CDS	2222284	2222724	.	-	0	ID=GCA000560365_02187;Name=3-hydroxyacyl-ACP dehydratase FabZ;locus_tag=GCA000560365_02187;product=3-hydroxyacyl-ACP dehydratase FabZ;Dbxref=GO:0005737,GO:0006633,GO:0009245,GO:0016020,GO:0019171;gene=fabZ;Parent=GCA000560365_02187_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0764,COG:I,KEGG:K02372,RefSeq:WP_000447678.1,SO:0001217,UniParc:UPI00000545E6,UniRef:UniRef100_Q2FWF5,UniRef:UniRef50_Q2FWF5,UniRef:UniRef90_Q2FWF5;ec_number=4.2.1.59
contig_1	Pyrodigal	gene	2222758	2224023	.	-	.	ID=GCA000560365_02188_gene;locus_tag=GCA000560365_02188;gene=murA
contig_1	Pyrodigal	CDS	2222758	2224023	.	-	0	ID=GCA000560365_02188;Name=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;locus_tag=GCA000560365_02188;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;Dbxref=GO:0008760,GO:0019277;gene=murA;Parent=GCA000560365_02188_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00790,RefSeq:WP_000358000.1,SO:0001217,UniParc:UPI0000696CAE,UniRef:UniRef100_A0A0E8J2T6,UniRef:UniRef50_P33986,UniRef:UniRef90_A0A0E8J2T6;ec_number=2.5.1.7
contig_1	Pyrodigal	gene	2224134	2224367	.	-	.	ID=GCA000560365_02189_gene;locus_tag=GCA000560365_02189;gene=ywzB
contig_1	Pyrodigal	CDS	2224134	2224367	.	-	0	ID=GCA000560365_02189;Name=DUF1146 domain-containing protein;locus_tag=GCA000560365_02189;product=DUF1146 domain-containing protein;gene=ywzB;Parent=GCA000560365_02189_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4836,COG:S,RefSeq:WP_000384523.1,SO:0001217,UniParc:UPI00000545E8,UniRef:UniRef100_Q2FWF3,UniRef:UniRef50_Q2FWF3,UniRef:UniRef90_Q2FWF3
contig_1	Pyrodigal	gene	2224929	2225333	.	-	.	ID=GCA000560365_02190_gene;locus_tag=GCA000560365_02190;gene=atpC
contig_1	Pyrodigal	CDS	2224929	2225333	.	-	0	ID=GCA000560365_02190;Name=F0F1 ATP synthase subunit epsilon;locus_tag=GCA000560365_02190;product=F0F1 ATP synthase subunit epsilon;Dbxref=GO:0005524,GO:0005886,GO:0015986,GO:0045261,GO:0046933;gene=atpC;Parent=GCA000560365_02190_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0355,RefSeq:WP_001094394.1,SO:0001217,UniParc:UPI00000545E9,UniRef:UniRef100_Q2FWF1,UniRef:UniRef50_Q8CNJ8,UniRef:UniRef90_Q2FWF1;ec_number=7.1.2.2
contig_1	Pyrodigal	gene	2225353	2226765	.	-	.	ID=GCA000560365_02191_gene;locus_tag=GCA000560365_02191;gene=atpD
contig_1	Pyrodigal	CDS	2225353	2226765	.	-	0	ID=GCA000560365_02191;Name=F0F1 ATP synthase subunit beta;locus_tag=GCA000560365_02191;product=F0F1 ATP synthase subunit beta;Dbxref=GO:0005524,GO:0005886,GO:0015986,GO:0016887,GO:0045261,GO:0046933,GO:0046961;gene=atpD;Parent=GCA000560365_02191_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0055,RefSeq:WP_000511135.1,SO:0001217,UniParc:UPI00000545EA,UniRef:UniRef100_Q2FWF0,UniRef:UniRef50_P50002,UniRef:UniRef90_Q2FWF0;ec_number=7.1.2.2
contig_1	Pyrodigal	gene	2226787	2227653	.	-	.	ID=GCA000560365_02192_gene;locus_tag=GCA000560365_02192;gene=atpG
contig_1	Pyrodigal	CDS	2226787	2227653	.	-	0	ID=GCA000560365_02192;Name=ATP synthase F1 subunit gamma;locus_tag=GCA000560365_02192;product=ATP synthase F1 subunit gamma;Dbxref=GO:0005524,GO:0005886,GO:0015986,GO:0042777,GO:0045261,GO:0046933;gene=atpG;Parent=GCA000560365_02192_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0224,KEGG:K02115,RefSeq:WP_000157603.1,SO:0001217,UniParc:UPI00000D76D5,UniRef:UniRef100_Q5HE96,UniRef:UniRef50_Q49Z51,UniRef:UniRef90_Q5HE96;ec_number=7.1.2.2
contig_1	Pyrodigal	gene	2227684	2229192	.	-	.	ID=GCA000560365_02193_gene;locus_tag=GCA000560365_02193;gene=atpA
contig_1	Pyrodigal	CDS	2227684	2229192	.	-	0	ID=GCA000560365_02193;Name=F0F1 ATP synthase subunit alpha;locus_tag=GCA000560365_02193;product=F0F1 ATP synthase subunit alpha;Dbxref=GO:0005524,GO:0005886,GO:0015986,GO:0043531,GO:0045261,GO:0046933,GO:0046961;gene=atpA;Parent=GCA000560365_02193_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0056,RefSeq:WP_000974881.1,SO:0001217,UniParc:UPI00000545EC,UniRef:UniRef100_Q2FWE8,UniRef:UniRef50_P26679,UniRef:UniRef90_Q2FWE8;ec_number=7.1.2.2
contig_1	Pyrodigal	gene	2229214	2229753	.	-	.	ID=GCA000560365_02194_gene;locus_tag=GCA000560365_02194;gene=atpH
contig_1	Pyrodigal	CDS	2229214	2229753	.	-	0	ID=GCA000560365_02194;Name=F0F1 ATP synthase subunit delta;locus_tag=GCA000560365_02194;product=F0F1 ATP synthase subunit delta;Dbxref=GO:0005886,GO:0045261,GO:0046933;gene=atpH;Parent=GCA000560365_02194_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0712,RefSeq:WP_000241351.1,SO:0001217,UniParc:UPI00000545ED,UniRef:UniRef100_Q2FWE7,UniRef:UniRef50_Q2FWE7,UniRef:UniRef90_Q2FWE7;ec_number=7.1.2.2
contig_1	Pyrodigal	gene	2229753	2230274	.	-	.	ID=GCA000560365_02195_gene;locus_tag=GCA000560365_02195;gene=atpF
contig_1	Pyrodigal	CDS	2229753	2230274	.	-	0	ID=GCA000560365_02195;Name=F0F1 ATP synthase subunit B;locus_tag=GCA000560365_02195;product=F0F1 ATP synthase subunit B;Dbxref=GO:0005886,GO:0045263,GO:0046933,GO:0046961;gene=atpF;Parent=GCA000560365_02195_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0711,RefSeq:WP_000140679.1,SO:0001217,UniParc:UPI00000D78AB,UniRef:UniRef100_Q2G2F8,UniRef:UniRef50_Q49Z54,UniRef:UniRef90_Q6GEW8
contig_1	Pyrodigal	gene	2230472	2230684	.	-	.	ID=GCA000560365_02196_gene;locus_tag=GCA000560365_02196;gene=atpE
contig_1	Pyrodigal	CDS	2230472	2230684	.	-	0	ID=GCA000560365_02196;Name=F0F1 ATP synthase subunit C;locus_tag=GCA000560365_02196;product=F0F1 ATP synthase subunit C;Dbxref=GO:0005886,GO:0008289,GO:0015078,GO:0015986,GO:0045263,GO:0046933;gene=atpE;Parent=GCA000560365_02196_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0636,RefSeq:WP_001048816.1,SO:0001217,UniParc:UPI00000545F0,UniRef:UniRef100_Q2G2F6,UniRef:UniRef50_P37815,UniRef:UniRef90_Q2G2F6;ec_number=7.1.2.2
contig_1	Pyrodigal	gene	2230727	2231455	.	-	.	ID=GCA000560365_02197_gene;locus_tag=GCA000560365_02197;gene=atpB
contig_1	Pyrodigal	CDS	2230727	2231455	.	-	0	ID=GCA000560365_02197;Name=F0F1 ATP synthase subunit A;locus_tag=GCA000560365_02197;product=F0F1 ATP synthase subunit A;Dbxref=GO:0005886,GO:0015078,GO:0015986,GO:0042777,GO:0045263,GO:0046933;gene=atpB;Parent=GCA000560365_02197_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0356,KEGG:K02108,RefSeq:WP_000349655.1,SO:0001217,UniParc:UPI00000545F1,UniRef:UniRef100_Q2G2F4,UniRef:UniRef50_Q2G2F4,UniRef:UniRef90_Q2G2F4;ec_number=7.1.2.2
contig_1	Pyrodigal	gene	2231476	2231829	.	-	.	ID=GCA000560365_02198_gene;locus_tag=GCA000560365_02198
contig_1	Pyrodigal	CDS	2231476	2231829	.	-	0	ID=GCA000560365_02198;Name=ATP synthase protein I;locus_tag=GCA000560365_02198;product=ATP synthase protein I;Parent=GCA000560365_02198_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000545F2,UniRef:UniRef100_A0A7U7EZC5,UniRef:UniRef50_A0A0U1MR76,UniRef:UniRef90_A0A7U7EZC5
contig_1	Pyrodigal	gene	2231996	2233123	.	-	.	ID=GCA000560365_02199_gene;locus_tag=GCA000560365_02199;gene=wecB
contig_1	Pyrodigal	CDS	2231996	2233123	.	-	0	ID=GCA000560365_02199;Name=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;locus_tag=GCA000560365_02199;product=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;Dbxref=GO:0008761;gene=wecB;Parent=GCA000560365_02199_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0381,COG:M,KEGG:K01791,RefSeq:WP_000723418.1,SO:0001217,UniParc:UPI00000BB0B7,UniRef:UniRef100_Q2G2F5,UniRef:UniRef50_A0A2Y8PHC9,UniRef:UniRef90_A0A2Y8PHC9;ec_number=5.1.3.14
contig_1	Pyrodigal	gene	2233147	2233776	.	-	.	ID=GCA000560365_02200_gene;locus_tag=GCA000560365_02200;gene=upp
contig_1	Pyrodigal	CDS	2233147	2233776	.	-	0	ID=GCA000560365_02200;Name=uracil phosphoribosyltransferase;locus_tag=GCA000560365_02200;product=uracil phosphoribosyltransferase;Dbxref=GO:0000287,GO:0004845,GO:0005525,GO:0006223,GO:0009116,GO:0044206;gene=upp;Parent=GCA000560365_02200_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0035,COG:F,RefSeq:WP_000048712.1,SO:0001217,UniParc:UPI00000545F4,UniRef:UniRef100_Q2FWE6,UniRef:UniRef50_Q9RU32,UniRef:UniRef90_Q2FWE6;ec_number=2.4.2.9
contig_1	Pyrodigal	gene	2233804	2235042	.	-	.	ID=GCA000560365_02201_gene;locus_tag=GCA000560365_02201;gene=glyA
contig_1	Pyrodigal	CDS	2233804	2235042	.	-	0	ID=GCA000560365_02201;Name=Serine hydroxymethyltransferase;locus_tag=GCA000560365_02201;product=Serine hydroxymethyltransferase;Dbxref=GO:0004372,GO:0005829,GO:0019264,GO:0030170,GO:0035999;gene=glyA;Parent=GCA000560365_02201_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0112,COG:E,KEGG:K00600,RefSeq:WP_000120500.1,SO:0001217,UniParc:UPI0000696CB0,UniRef:UniRef100_Q2FF15,UniRef:UniRef50_Q2FWE5,UniRef:UniRef90_Q2FWE5;ec_number=2.1.2.1
contig_1	Pyrodigal	gene	2235069	2235593	.	-	.	ID=GCA000560365_02202_gene;locus_tag=GCA000560365_02202;gene=ywlG
contig_1	Pyrodigal	CDS	2235069	2235593	.	-	0	ID=GCA000560365_02202;Name=UPF0340 protein SAR2202;locus_tag=GCA000560365_02202;product=UPF0340 protein SAR2202;gene=ywlG;Parent=GCA000560365_02202_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4475,COG:S,RefSeq:WP_000654185.1,SO:0001217,UniParc:UPI00000545F6,UniRef:UniRef100_Q2FWE4,UniRef:UniRef50_Q2FWE4,UniRef:UniRef90_Q2FWE4
contig_1	Pyrodigal	gene	2235700	2236119	.	-	.	ID=GCA000560365_02203_gene;locus_tag=GCA000560365_02203;gene=ptpB
contig_1	Pyrodigal	CDS	2235700	2236119	.	-	0	ID=GCA000560365_02203;Name=Low molecular weight protein-tyrosine-phosphatase PtpB;locus_tag=GCA000560365_02203;product=Low molecular weight protein-tyrosine-phosphatase PtpB;Dbxref=GO:0004726,GO:0030946,GO:0140793;gene=ptpB;Parent=GCA000560365_02203_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0394,COG:T,RefSeq:WP_000697334.1,SO:0001217,UniParc:UPI000004740C,UniRef:UniRef100_Q2FWE3,UniRef:UniRef50_Q2FWE3,UniRef:UniRef90_Q2FWE3;ec_number=3.1.3.48
contig_1	Pyrodigal	gene	2236116	2237162	.	-	.	ID=GCA000560365_02204_gene;locus_tag=GCA000560365_02204;gene=tsaC
contig_1	Pyrodigal	CDS	2236116	2237162	.	-	0	ID=GCA000560365_02204;Name=L-threonylcarbamoyladenylate synthase;locus_tag=GCA000560365_02204;product=L-threonylcarbamoyladenylate synthase;Dbxref=GO:0003725,GO:0006400,GO:0061710;gene=tsaC;Parent=GCA000560365_02204_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0009,COG:J,RefSeq:WP_000379888.1,SO:0001217,UniParc:UPI0000696CB1,UniRef:UniRef100_A0A0D3QBK7,UniRef:UniRef50_A0A6K1LH12,UniRef:UniRef90_A0A6K1LH12;ec_number=2.7.7.87
contig_1	Pyrodigal	gene	2237246	2238082	.	-	.	ID=GCA000560365_02205_gene;locus_tag=GCA000560365_02205;gene=prmC
contig_1	Pyrodigal	CDS	2237246	2238082	.	-	0	ID=GCA000560365_02205;Name=peptide chain release factor N(5)-glutamine methyltransferase;locus_tag=GCA000560365_02205;product=peptide chain release factor N(5)-glutamine methyltransferase;Dbxref=GO:0003676,GO:0006412,GO:0006415,GO:0008757,GO:0018364,GO:0032259,GO:0036009,GO:0102559;gene=prmC;Parent=GCA000560365_02205_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2890,COG:J,RefSeq:WP_000248735.1,SO:0001217,UniParc:UPI00000545F8,UniRef:UniRef100_Q2FWE1,UniRef:UniRef50_Q2FWE1,UniRef:UniRef90_Q2FWE1;ec_number=2.1.1.297
contig_1	Pyrodigal	gene	2238069	2239145	.	-	.	ID=GCA000560365_02206_gene;locus_tag=GCA000560365_02206;gene=prfA
contig_1	Pyrodigal	CDS	2238069	2239145	.	-	0	ID=GCA000560365_02206;Name=peptide chain release factor 1;locus_tag=GCA000560365_02206;product=peptide chain release factor 1;Dbxref=GO:0005737,GO:0006415,GO:0016149;gene=prfA;Parent=GCA000560365_02206_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0216,COG:J,KEGG:K02835,RefSeq:WP_000460242.1,SO:0001217,UniParc:UPI0000133750,UniRef:UniRef100_Q2FWE0,UniRef:UniRef50_B9DS45,UniRef:UniRef90_Q2FWE0
contig_1	Pyrodigal	gene	2239146	2239745	.	-	.	ID=GCA000560365_02207_gene;locus_tag=GCA000560365_02207;gene=tdk
contig_1	Pyrodigal	CDS	2239146	2239745	.	-	0	ID=GCA000560365_02207;Name=thymidine kinase;locus_tag=GCA000560365_02207;product=thymidine kinase;Dbxref=GO:0004797,GO:0005524,GO:0005829,GO:0008270,GO:0046104,GO:0071897;gene=tdk;Parent=GCA000560365_02207_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1435,COG:F,KEGG:K00857,RefSeq:WP_000273356.1,SO:0001217,UniParc:UPI00000D9F35,UniRef:UniRef100_Q2FF09,UniRef:UniRef50_Q5KUH1,UniRef:UniRef90_Q2FF09;ec_number=2.7.1.21
contig_1	Pyrodigal	gene	2240092	2240346	.	-	.	ID=GCA000560365_02208_gene;locus_tag=GCA000560365_02208;gene=rpmE2
contig_1	Pyrodigal	CDS	2240092	2240346	.	-	0	ID=GCA000560365_02208;Name=type B 50S ribosomal protein L31;locus_tag=GCA000560365_02208;product=type B 50S ribosomal protein L31;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:1990904;gene=rpmE2;Parent=GCA000560365_02208_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0254,COG:J,RefSeq:WP_000808968.1,SO:0001217,UniParc:UPI00000545FB,UniRef:UniRef100_Q2FWD8,UniRef:UniRef50_Q5HMA2,UniRef:UniRef90_Q5HMA2
contig_1	Pyrodigal	gene	2240464	2241780	.	-	.	ID=GCA000560365_02209_gene;locus_tag=GCA000560365_02209;gene=rho
contig_1	Pyrodigal	CDS	2240464	2241780	.	-	0	ID=GCA000560365_02209;Name=transcription termination factor Rho;locus_tag=GCA000560365_02209;product=transcription termination factor Rho;Dbxref=GO:0003723,GO:0005524,GO:0006353,GO:0008186;gene=rho;Parent=GCA000560365_02209_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1158,COG:K,KEGG:K03628,RefSeq:WP_001115101.1,SO:0001217,UniParc:UPI00000D7733,UniRef:UniRef100_A0A133PU93,UniRef:UniRef50_A0A2D6ZY33,UniRef:UniRef90_A0A133PU93;ec_number=3.6.4.-
contig_1	Pyrodigal	gene	2242027	2243454	.	-	.	ID=GCA000560365_02210_gene;locus_tag=GCA000560365_02210;gene=adhE
contig_1	Pyrodigal	CDS	2242027	2243454	.	-	0	ID=GCA000560365_02210;Name=Putative aldehyde dehydrogenase;locus_tag=GCA000560365_02210;product=Putative aldehyde dehydrogenase;Dbxref=GO:0004029,GO:0006081;gene=adhE;Parent=GCA000560365_02210_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1012,COG:I,RefSeq:WP_001206093.1,SO:0001217,UniParc:UPI00000CA95D,UniRef:UniRef100_Q2FWD6,UniRef:UniRef50_Q4L803,UniRef:UniRef90_Q2FWD6;ec_number=1.2.1.3
contig_1	Pyrodigal	gene	2243692	2244027	.	-	.	ID=GCA000560365_02211_gene;locus_tag=GCA000560365_02211;gene=hxlR
contig_1	Pyrodigal	CDS	2243692	2244027	.	-	0	ID=GCA000560365_02211;Name=HTH hxlR-type domain-containing protein;locus_tag=GCA000560365_02211;product=HTH hxlR-type domain-containing protein;gene=hxlR;Parent=GCA000560365_02211_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1733,COG:K,RefSeq:WP_000451438.1,SO:0001217,UniParc:UPI00004B5C7F,UniRef:UniRef100_A0AA43V3D6,UniRef:UniRef50_B9DMD6,UniRef:UniRef90_A0A7U7PWB3
contig_1	Pyrodigal	gene	2244116	2245375	.	-	.	ID=GCA000560365_02212_gene;locus_tag=GCA000560365_02212;gene=murA2
contig_1	Pyrodigal	CDS	2244116	2245375	.	-	0	ID=GCA000560365_02212;Name=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;locus_tag=GCA000560365_02212;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;Dbxref=GO:0005737,GO:0008360,GO:0008760,GO:0009252,GO:0019277,GO:0051301,GO:0071555;gene=murA2;Parent=GCA000560365_02212_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0766,COG:M,KEGG:K00790,RefSeq:WP_000046602.1,SO:0001217,UniParc:UPI00000545FF,UniRef:UniRef100_Q5HE76,UniRef:UniRef50_P19670,UniRef:UniRef90_Q6GEV1;ec_number=2.5.1.7
contig_1	Pyrodigal	gene	2245841	2246701	.	-	.	ID=GCA000560365_02213_gene;locus_tag=GCA000560365_02213;gene=fba
contig_1	Pyrodigal	CDS	2245841	2246701	.	-	0	ID=GCA000560365_02213;Name=class II fructose-bisphosphate aldolase;locus_tag=GCA000560365_02213;product=class II fructose-bisphosphate aldolase;Dbxref=GO:0004332,GO:0006096,GO:0008270,GO:0030388;gene=fba;Parent=GCA000560365_02213_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0191,COG:G,KEGG:K01624,RefSeq:WP_001131841.1,SO:0001217,UniParc:UPI00000D7773,UniRef:UniRef100_Q5HE75,UniRef:UniRef50_P94453,UniRef:UniRef90_Q5HM97;ec_number=4.1.2.13
contig_1	Pyrodigal	gene	2246919	2247440	.	+	.	ID=GCA000560365_02214_gene;locus_tag=GCA000560365_02214
contig_1	Pyrodigal	CDS	2246919	2247440	.	+	0	ID=GCA000560365_02214;Name=DUF2529 domain-containing protein;locus_tag=GCA000560365_02214;product=DUF2529 domain-containing protein;Parent=GCA000560365_02214_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000036005.1,SO:0001217,UniParc:UPI0000054601,UniRef:UniRef100_Q2FWD2,UniRef:UniRef50_Q2FWD2,UniRef:UniRef90_Q2FWD2
contig_1	Pyrodigal	gene	2247549	2249159	.	-	.	ID=GCA000560365_02215_gene;locus_tag=GCA000560365_02215;gene=pyrG
contig_1	Pyrodigal	CDS	2247549	2249159	.	-	0	ID=GCA000560365_02215;Name=CTP synthase;locus_tag=GCA000560365_02215;product=CTP synthase;Dbxref=GO:0003883,GO:0004359,GO:0005524,GO:0005829,GO:0006221,GO:0006241,GO:0019856,GO:0042802,GO:0044210,GO:0046872;gene=pyrG;Parent=GCA000560365_02215_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0504,COG:F,RefSeq:WP_000159960.1,SO:0001217,UniParc:UPI0000132D80,UniRef:UniRef100_Q2FF01,UniRef:UniRef50_Q8Y495,UniRef:UniRef90_Q2FWD1;ec_number=6.3.4.2
contig_1	Infernal	gene	2249378	2249447	.	-	.	ID=GCA000560365_02216_gene;locus_tag=GCA000560365_02216;gene=tsr31
contig_1	Infernal	ncRNA	2249378	2249447	5.6e-16	-	.	ID=GCA000560365_02216;Name=S. aureus tsr31 small RNA;locus_tag=GCA000560365_02216;product=S. aureus tsr31 small RNA;Dbxref=RFAM:RF02580;Parent=GCA000560365_02216_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02580
contig_1	Pyrodigal	gene	2249495	2250025	.	-	.	ID=GCA000560365_02217_gene;locus_tag=GCA000560365_02217;gene=rpoE
contig_1	Pyrodigal	CDS	2249495	2250025	.	-	0	ID=GCA000560365_02217;Name=DNA-directed RNA polymerase subunit delta;locus_tag=GCA000560365_02217;product=DNA-directed RNA polymerase subunit delta;Dbxref=GO:0000428,GO:0003899,GO:0006351,GO:0006355;gene=rpoE;Parent=GCA000560365_02217_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3343,COG:K,KEGG:K03048,RefSeq:WP_000701483.1,SO:0001217,UniParc:UPI0000054604,UniRef:UniRef100_Q2FWD0,UniRef:UniRef50_Q2FWD0,UniRef:UniRef90_Q2FWD0;ec_number=2.7.7.6
contig_1	Pyrodigal	gene	2250137	2250997	.	-	.	ID=GCA000560365_02218_gene;locus_tag=GCA000560365_02218;gene=rimL
contig_1	Pyrodigal	CDS	2250137	2250997	.	-	0	ID=GCA000560365_02218;Name=N-acetyltransferase domain-containing protein;locus_tag=GCA000560365_02218;product=N-acetyltransferase domain-containing protein;gene=rimL;Parent=GCA000560365_02218_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1670,COG:JO,RefSeq:WP_001040736.1,SO:0001217,UniParc:UPI0000054605,UniRef:UniRef100_Q2FWC9,UniRef:UniRef50_Q2FWC9,UniRef:UniRef90_Q2FWC9
contig_1	Pyrodigal	gene	2251421	2252224	.	+	.	ID=GCA000560365_02219_gene;locus_tag=GCA000560365_02219;gene=coaW
contig_1	Pyrodigal	CDS	2251421	2252224	.	+	0	ID=GCA000560365_02219;Name=type II pantothenate kinase;locus_tag=GCA000560365_02219;product=type II pantothenate kinase;Dbxref=GO:0004594,GO:0005524,GO:0005829,GO:0015937;gene=coaW;Parent=GCA000560365_02219_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5146,COG:H,RefSeq:WP_000862727.1,SO:0001217,UniParc:UPI0000054606,UniRef:UniRef100_Q2FWC7,UniRef:UniRef50_Q2FWC7,UniRef:UniRef90_Q2FWC7;ec_number=2.7.1.33
contig_1	Pyrodigal	gene	2252354	2253025	.	-	.	ID=GCA000560365_02220_gene;locus_tag=GCA000560365_02220
contig_1	Pyrodigal	CDS	2252354	2253025	.	-	0	ID=GCA000560365_02220;Name=DUF2750 domain-containing protein;locus_tag=GCA000560365_02220;product=DUF2750 domain-containing protein;Parent=GCA000560365_02220_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000120549.1,SO:0001217,UniParc:UPI0000054607,UniRef:UniRef100_Q2FWC6,UniRef:UniRef50_Q2FWC6,UniRef:UniRef90_Q2FWC6
contig_1	Pyrodigal	gene	2253424	2254617	.	-	.	ID=GCA000560365_02221_gene;locus_tag=GCA000560365_02221;gene=accC
contig_1	Pyrodigal	CDS	2253424	2254617	.	-	0	ID=GCA000560365_02221;Name=L-aspartate--L-methionine ligase;locus_tag=GCA000560365_02221;product=L-aspartate--L-methionine ligase;Dbxref=GO:0000096,GO:0000287,GO:0005524,GO:0006555,GO:0016881,GO:0034026,GO:0042802,GO:0042803,GO:1901605;gene=accC;Parent=GCA000560365_02221_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0439,COG:I,KEGG:K27344,RefSeq:WP_000183726.1,SO:0001217,UniParc:UPI0000054608,UniRef:UniRef100_Q2FWC5,UniRef:UniRef50_Q2FWC5,UniRef:UniRef90_Q2FWC5;ec_number=6.3.2.-
contig_1	Pyrodigal	gene	2254617	2255801	.	-	.	ID=GCA000560365_02222_gene;locus_tag=GCA000560365_02222;gene=abgB
contig_1	Pyrodigal	CDS	2254617	2255801	.	-	0	ID=GCA000560365_02222;Name=Peptidase M20 domain-containing protein 2;locus_tag=GCA000560365_02222;product=Peptidase M20 domain-containing protein 2;gene=abgB;Parent=GCA000560365_02222_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1473,COG:R,RefSeq:WP_001291500.1,SO:0001217,UniParc:UPI00000522DD,UniRef:UniRef100_Q2FWC4,UniRef:UniRef50_Q79EU8,UniRef:UniRef90_Q79EU8
contig_1	Pyrodigal	gene	2256112	2256582	.	+	.	ID=GCA000560365_02223_gene;locus_tag=GCA000560365_02223;gene=luxS
contig_1	Pyrodigal	CDS	2256112	2256582	.	+	0	ID=GCA000560365_02223;Name=S-ribosylhomocysteine lyase;locus_tag=GCA000560365_02223;product=S-ribosylhomocysteine lyase;Dbxref=GO:0005506,GO:0009372,GO:0043768;gene=luxS;Parent=GCA000560365_02223_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1854,COG:T,KEGG:K07173,RefSeq:WP_000164421.1,SO:0001217,UniParc:UPI0000054609,UniRef:UniRef100_Q2FWC3,UniRef:UniRef50_Q9ZMW8,UniRef:UniRef90_Q2FWC3;ec_number=4.4.1.21
contig_1	Pyrodigal	gene	2256734	2257084	.	-	.	ID=GCA000560365_02224_gene;locus_tag=GCA000560365_02224;gene=doxX
contig_1	Pyrodigal	CDS	2256734	2257084	.	-	0	ID=GCA000560365_02224;Name=DoxX family membrane protein;locus_tag=GCA000560365_02224;product=DoxX family membrane protein;gene=doxX;Parent=GCA000560365_02224_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4270,COG:R,RefSeq:WP_001024035.1,SO:0001217,UniParc:UPI00000CAC3B,UniRef:UniRef100_Q2FWC2,UniRef:UniRef50_B9DJX6,UniRef:UniRef90_Q2FWC2
contig_1	Pyrodigal	gene	2257098	2258399	.	-	.	ID=GCA000560365_02225_gene;locus_tag=GCA000560365_02225;gene=pdp
contig_1	Pyrodigal	CDS	2257098	2258399	.	-	0	ID=GCA000560365_02225;Name=pyrimidine-nucleoside phosphorylase;locus_tag=GCA000560365_02225;product=pyrimidine-nucleoside phosphorylase;Dbxref=GO:0004645,GO:0004850,GO:0005829,GO:0006206,GO:0006213,GO:0009032,GO:0016154,GO:0046872,GO:0047847;gene=pdp;Parent=GCA000560365_02225_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0213,COG:F,KEGG:K04047,RefSeq:WP_001242318.1,SO:0001217,UniParc:UPI00004B5C81,UniRef:UniRef100_Q2FWC1,UniRef:UniRef50_Q99SC3,UniRef:UniRef90_Q99SC3;ec_number=2.4.2.2
contig_1	Pyrodigal	gene	2258678	2259340	.	-	.	ID=GCA000560365_02226_gene;locus_tag=GCA000560365_02226;gene=deoC
contig_1	Pyrodigal	CDS	2258678	2259340	.	-	0	ID=GCA000560365_02226;Name=deoxyribose-phosphate aldolase;locus_tag=GCA000560365_02226;product=deoxyribose-phosphate aldolase;Dbxref=GO:0004139,GO:0005737,GO:0006018,GO:0009264,GO:0016052;gene=deoC;Parent=GCA000560365_02226_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0274,COG:F,KEGG:K01619,RefSeq:WP_001083316.1,SO:0001217,UniParc:UPI0000696CB3,UniRef:UniRef100_A0A5A8VF33,UniRef:UniRef50_Q6GKG7,UniRef:UniRef90_Q6GKG7;ec_number=4.1.2.4
contig_1	Pyrodigal	gene	2259655	2260365	.	+	.	ID=GCA000560365_02227_gene;locus_tag=GCA000560365_02227;gene=deoD
contig_1	Pyrodigal	CDS	2259655	2260365	.	+	0	ID=GCA000560365_02227;Name=purine-nucleoside phosphorylase;locus_tag=GCA000560365_02227;product=purine-nucleoside phosphorylase;Dbxref=GO:0004731,GO:0006139;gene=deoD;Parent=GCA000560365_02227_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0813,COG:F,KEGG:K03784,RefSeq:WP_000160304.1,SO:0001217,UniParc:UPI000005460E,UniRef:UniRef100_Q2FWB8,UniRef:UniRef50_A0A1C5V1M1,UniRef:UniRef90_A0A2K4AEZ2;ec_number=2.4.2.1
contig_1	Pyrodigal	gene	2260486	2260929	.	-	.	ID=GCA000560365_02228_gene;locus_tag=GCA000560365_02228;gene=dps
contig_1	Pyrodigal	CDS	2260486	2260929	.	-	0	ID=GCA000560365_02228;Name=DNA starvation/stationary phase protection protein;locus_tag=GCA000560365_02228;product=DNA starvation/stationary phase protection protein;gene=dps;Parent=GCA000560365_02228_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:B,COG:COG0783,KEGG:K04047,RefSeq:WP_000070866.1,SO:0001217,UniParc:UPI000005460F,UniRef:UniRef100_Q2FWB7,UniRef:UniRef50_A0A9Q9F1A2,UniRef:UniRef90_A0A2K4AF10
contig_1	Pyrodigal	gene	2261129	2261542	.	-	.	ID=GCA000560365_02229_gene;locus_tag=GCA000560365_02229;gene=yuxK
contig_1	Pyrodigal	CDS	2261129	2261542	.	-	0	ID=GCA000560365_02229;Name=DUF393 domain-containing protein;locus_tag=GCA000560365_02229;product=DUF393 domain-containing protein;gene=yuxK;Parent=GCA000560365_02229_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3011,COG:R,RefSeq:WP_001123303.1,SO:0001217,UniParc:UPI0000054610,UniRef:UniRef100_Q2FWB6,UniRef:UniRef50_Q2FWB6,UniRef:UniRef90_Q2FWB6
contig_1	Pyrodigal	gene	2262000	2263373	.	-	.	ID=GCA000560365_02230_gene;locus_tag=GCA000560365_02230;gene=eVE
contig_1	Pyrodigal	CDS	2262000	2263373	.	-	0	ID=GCA000560365_02230;Name=EVE domain-containing protein;locus_tag=GCA000560365_02230;product=EVE domain-containing protein;gene=eVE;Parent=GCA000560365_02230_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2947,COG:R,RefSeq:WP_000123393.1,SO:0001217,UniParc:UPI0000054611,UniRef:UniRef100_Q2FWB5,UniRef:UniRef50_Q49Z89,UniRef:UniRef90_Q2FWB5
contig_1	Pyrodigal	gene	2264045	2264275	.	-	.	ID=GCA000560365_02231_gene;locus_tag=GCA000560365_02231
contig_1	Pyrodigal	CDS	2264045	2264275	.	-	0	ID=GCA000560365_02231;Name=Integral membrane protein;locus_tag=GCA000560365_02231;product=Integral membrane protein;Parent=GCA000560365_02231_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000808817.1,SO:0001217,UniParc:UPI00000D76A1,UniRef:UniRef100_Q2FWB4,UniRef:UniRef50_Q2FWB4,UniRef:UniRef90_Q2FWB4
contig_1	Pyrodigal	gene	2264306	2265244	.	-	.	ID=GCA000560365_02232_gene;locus_tag=GCA000560365_02232;gene=manA
contig_1	Pyrodigal	CDS	2264306	2265244	.	-	0	ID=GCA000560365_02232;Name=mannose-6-phosphate isomerase%2C class I;locus_tag=GCA000560365_02232;product=mannose-6-phosphate isomerase%2C class I;Dbxref=GO:0004476,GO:0005975,GO:0008270;gene=manA;Parent=GCA000560365_02232_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1482,COG:G,RefSeq:WP_001127960.1,SO:0001217,UniParc:UPI00000D7844,UniRef:UniRef100_A0A7U7EZF3,UniRef:UniRef50_A0A0A8HNJ1,UniRef:UniRef90_A0A0E1XIN3;ec_number=5.3.1.8
contig_1	Pyrodigal	gene	2265679	2266344	.	-	.	ID=GCA000560365_02233_gene;locus_tag=GCA000560365_02233;gene=ybjT
contig_1	Pyrodigal	CDS	2265679	2266344	.	-	0	ID=GCA000560365_02233;Name=putative sugar epimerase YhfK;locus_tag=GCA000560365_02233;product=putative sugar epimerase YhfK;gene=ybjT;Parent=GCA000560365_02233_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0702,COG:R,RefSeq:WP_001024094.1,SO:0001217,UniParc:UPI0000054615,UniRef:UniRef100_Q2FWB1,UniRef:UniRef50_A0A1W7A9I9,UniRef:UniRef90_A0A7U7JQM2
contig_1	Pyrodigal	gene	2266496	2266816	.	+	.	ID=GCA000560365_02234_gene;locus_tag=GCA000560365_02234;gene=czrA
contig_1	Pyrodigal	CDS	2266496	2266816	.	+	0	ID=GCA000560365_02234;Name=Zn(II)-responsive metalloregulatory transcriptional repressor CzrA;locus_tag=GCA000560365_02234;product=Zn(II)-responsive metalloregulatory transcriptional repressor CzrA;gene=czrA;Parent=GCA000560365_02234_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000003759,BlastRules:WP_002499956,BlastRules:WP_003231284,COG:COG0640,COG:K,RefSeq:WP_000003759.1,SO:0001217,UniParc:UPI0000054616,UniRef:UniRef100_Q2FWB0,UniRef:UniRef50_Q2FWB0,UniRef:UniRef90_Q2FWB0
contig_1	Pyrodigal	gene	2266818	2267798	.	+	.	ID=GCA000560365_02235_gene;locus_tag=GCA000560365_02235;gene=czrB
contig_1	Pyrodigal	CDS	2266818	2267798	.	+	0	ID=GCA000560365_02235;Name=CDF family zinc efflux transporter CzrB;locus_tag=GCA000560365_02235;product=CDF family zinc efflux transporter CzrB;gene=czrB;Parent=GCA000560365_02235_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_128146008,COG:COG1230,COG:P,RefSeq:WP_000019744.1,SO:0001217,UniParc:UPI00004B5C82,UniRef:UniRef100_Q2FWA9,UniRef:UniRef50_A0A7U7JQM3,UniRef:UniRef90_A0A7U7JQM3
contig_1	Pyrodigal	gene	2268064	2269155	.	+	.	ID=GCA000560365_02236_gene;locus_tag=GCA000560365_02236
contig_1	Pyrodigal	CDS	2268064	2269155	.	+	0	ID=GCA000560365_02236;Name=Transcriptional regulator;locus_tag=GCA000560365_02236;product=Transcriptional regulator;Parent=GCA000560365_02236_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000495671.1,SO:0001217,UniParc:UPI0000696CB4,UniRef:UniRef100_Q2FWA8,UniRef:UniRef50_A0A0E1X8C7,UniRef:UniRef90_A0A0E1X8C7
contig_1	Bakta	gene	2269655	2269735	.	-	.	ID=GCA000560365_02237_gene;locus_tag=GCA000560365_02237;inference=ab initio prediction:Bakta
contig_1	Bakta	CDS	2269655	2269735	.	-	0	ID=GCA000560365_02237;Name=Holin-like toxin;locus_tag=GCA000560365_02237;product=Holin-like toxin;Parent=GCA000560365_02237_gene;Note=RefSeq:WP_001790137.1,SO:0001217,UniParc:UPI00000D9F3D,UniRef:UniRef100_Q2FWA7,UniRef:UniRef50_Q2FWA7,UniRef:UniRef90_Q2FWA7
contig_1	Infernal	gene	2269662	2269842	.	-	.	ID=GCA000560365_02238_gene;locus_tag=GCA000560365_02238;gene=rli28
contig_1	Infernal	ncRNA	2269662	2269842	7.5e-17	-	.	ID=GCA000560365_02238;Name=Listeria sRNA rli28;locus_tag=GCA000560365_02238;product=Listeria sRNA rli28;Dbxref=RFAM:RF01492;Parent=GCA000560365_02238_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01492
contig_1	Pyrodigal	gene	2270184	2270387	.	-	.	ID=GCA000560365_02239_gene;locus_tag=GCA000560365_02239
contig_1	Pyrodigal	CDS	2270184	2270387	.	-	0	ID=GCA000560365_02239;Name=DNA-invertase hin;locus_tag=GCA000560365_02239;product=DNA-invertase hin;Parent=GCA000560365_02239_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000069AB2E,UniRef:UniRef100_Q2FWA6,UniRef:UniRef50_A0A6J9WDM0,UniRef:UniRef90_A0A6J9WDM0
contig_1	Pyrodigal	gene	2270446	2271582	.	-	.	ID=GCA000560365_02240_gene;locus_tag=GCA000560365_02240
contig_1	Pyrodigal	CDS	2270446	2271582	.	-	0	ID=GCA000560365_02240;Name=SAP domain-containing protein;locus_tag=GCA000560365_02240;product=SAP domain-containing protein;Parent=GCA000560365_02240_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000115564.1,SO:0001217,UniParc:UPI00004B5C84,UniRef:UniRef100_A0A0E7RYR7,UniRef:UniRef50_Q2FWA5,UniRef:UniRef90_Q2FWA5
contig_1	Pyrodigal	gene	2272668	2273525	.	-	.	ID=GCA000560365_02241_gene;locus_tag=GCA000560365_02241;gene=cof
contig_1	Pyrodigal	CDS	2272668	2273525	.	-	0	ID=GCA000560365_02241;Name=Cof-type HAD-IIB family hydrolase;locus_tag=GCA000560365_02241;product=Cof-type HAD-IIB family hydrolase;gene=cof;Parent=GCA000560365_02241_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0561,COG:HR,RefSeq:WP_000370924.1,SO:0001217,UniParc:UPI0000696CB5,UniRef:UniRef100_Q2FWA2,UniRef:UniRef50_Q2FWA2,UniRef:UniRef90_Q2FWA2
contig_1	Pyrodigal	gene	2273593	2274375	.	-	.	ID=GCA000560365_02242_gene;locus_tag=GCA000560365_02242;gene=modF
contig_1	Pyrodigal	CDS	2273593	2274375	.	-	0	ID=GCA000560365_02242;Name=ABC superfamily ATP binding cassette transporter%2C ABC protein;locus_tag=GCA000560365_02242;product=ABC superfamily ATP binding cassette transporter%2C ABC protein;gene=modF;Parent=GCA000560365_02242_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1119,COG:P,RefSeq:WP_000908176.1,SO:0001217,UniParc:UPI0000696CB6,UniRef:UniRef100_A0A0E8J4E5,UniRef:UniRef50_Q4L835,UniRef:UniRef90_A0A391EDP6
contig_1	Pyrodigal	gene	2274607	2276412	.	-	.	ID=GCA000560365_02243_gene;locus_tag=GCA000560365_02243;gene=glmS
contig_1	Pyrodigal	CDS	2274607	2276412	.	-	0	ID=GCA000560365_02243;Name=glutamine--fructose-6-phosphate transaminase (isomerizing);locus_tag=GCA000560365_02243;product=glutamine--fructose-6-phosphate transaminase (isomerizing);Dbxref=GO:0004360,GO:0005829,GO:0005975,GO:0006002,GO:0006047,GO:0006487,GO:0097367,GO:1901137;gene=glmS;Parent=GCA000560365_02243_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0449,COG:M,KEGG:K00820,RefSeq:WP_000334465.1,SO:0001217,UniParc:UPI0000054621,UniRef:UniRef100_Q5HE49,UniRef:UniRef50_Q88YE7,UniRef:UniRef90_Q6GES3;ec_number=2.6.1.16
contig_1	Infernal	regulatory_region	2276614	2276830	1.3e-18	-	.	ID=KMHODOBJJH_169;Name=glmS glucosamine-6-phosphate activated ribozyme aptamer;product=glmS glucosamine-6-phosphate activated ribozyme aptamer;Dbxref=RFAM:RF00234;inference=profile:Rfam:RF00234;Note=SO:0005836;regulatory_class=other
contig_1	Pyrodigal	gene	2277093	2278631	.	+	.	ID=GCA000560365_02244_gene;locus_tag=GCA000560365_02244;gene=mtlA
contig_1	Pyrodigal	CDS	2277093	2278631	.	+	0	ID=GCA000560365_02244;Name=PTS system mannitol-specific EIICB component;locus_tag=GCA000560365_02244;product=PTS system mannitol-specific EIICB component;Dbxref=GO:0005886,GO:0009401,GO:0016301,GO:0022872,GO:0090563;gene=mtlA;Parent=GCA000560365_02244_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2213,COG:G,KEGG:K02800,RefSeq:WP_000083807.1,SO:0001217,UniParc:UPI0000054622,UniRef:UniRef100_Q99SA3,UniRef:UniRef50_P28008,UniRef:UniRef90_Q99SA3;ec_number=2.7.1.197
contig_1	Pyrodigal	gene	2278666	2280798	.	+	.	ID=GCA000560365_02245_gene;locus_tag=GCA000560365_02245;gene=bglG
contig_1	Pyrodigal	CDS	2278666	2280798	.	+	0	ID=GCA000560365_02245;Name=BglG family transcription antiterminator;locus_tag=GCA000560365_02245;product=BglG family transcription antiterminator;gene=bglG;Parent=GCA000560365_02245_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3711,COG:K,KEGG:K03483,RefSeq:WP_000927360.1,SO:0001217,UniParc:UPI0000696CB7,UniRef:UniRef100_A0A1S6C2H3,UniRef:UniRef50_A0A0D6H7E9,UniRef:UniRef90_A0A0D6H7E9
contig_1	Pyrodigal	gene	2280810	2281244	.	+	.	ID=GCA000560365_02246_gene;locus_tag=GCA000560365_02246;gene=mtlF
contig_1	Pyrodigal	CDS	2280810	2281244	.	+	0	ID=GCA000560365_02246;Name=Mannitol-specific phosphotransferase enzyme IIA component;locus_tag=GCA000560365_02246;product=Mannitol-specific phosphotransferase enzyme IIA component;Dbxref=GO:0005737,GO:0005886,GO:0009401,GO:0016301,GO:0090563;gene=mtlF;Parent=GCA000560365_02246_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4668,COG:G,RefSeq:WP_001292149.1,SO:0001217,UniParc:UPI0000165A32,UniRef:UniRef100_Q5HE46,UniRef:UniRef50_P17876,UniRef:UniRef90_Q5HE46
contig_1	Pyrodigal	gene	2281244	2282350	.	+	.	ID=GCA000560365_02247_gene;locus_tag=GCA000560365_02247;gene=mtlD
contig_1	Pyrodigal	CDS	2281244	2282350	.	+	0	ID=GCA000560365_02247;Name=mannitol-1-phosphate 5-dehydrogenase;locus_tag=GCA000560365_02247;product=mannitol-1-phosphate 5-dehydrogenase;Dbxref=GO:0005829,GO:0008926,GO:0019592;gene=mtlD;Parent=GCA000560365_02247_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0246,COG:G,KEGG:K00009,RefSeq:WP_000648718.1,SO:0001217,UniParc:UPI00000B98FA,UniRef:UniRef100_Q2FEX4,UniRef:UniRef50_Q2FW96,UniRef:UniRef90_Q2FW96;ec_number=1.1.1.17
contig_1	Pyrodigal	gene	2282669	2286550	.	-	.	ID=GCA000560365_02248_gene;locus_tag=GCA000560365_02248;gene=fmtB
contig_1	Pyrodigal	CDS	2282669	2286550	.	-	0	ID=GCA000560365_02248;Name=Truncated FmtB protein;locus_tag=GCA000560365_02248;product=Truncated FmtB protein;gene=fmtB;Parent=GCA000560365_02248_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000696CB9,UniRef:UniRef100_A0A0H2XI22,UniRef:UniRef50_A0A0H2XI22,UniRef:UniRef90_A0A0H2XI22
contig_1	Pyrodigal	gene	2286797	2290105	.	-	.	ID=GCA000560365_02249_gene;locus_tag=GCA000560365_02249
contig_1	Pyrodigal	CDS	2286797	2290105	.	-	0	ID=GCA000560365_02249;Name=DUF1542 domain-containing protein;locus_tag=GCA000560365_02249;product=DUF1542 domain-containing protein;Parent=GCA000560365_02249_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000696CBA,UniRef:UniRef100_Q9RL69,UniRef:UniRef50_Q2FW95,UniRef:UniRef90_Q2FW95
contig_1	Pyrodigal	gene	2290382	2291737	.	-	.	ID=GCA000560365_02250_gene;locus_tag=GCA000560365_02250;gene=glmM
contig_1	Pyrodigal	CDS	2290382	2291737	.	-	0	ID=GCA000560365_02250;Name=phosphoglucosamine mutase;locus_tag=GCA000560365_02250;product=phosphoglucosamine mutase;Dbxref=GO:0000287,GO:0004615,GO:0005829,GO:0005975,GO:0006048,GO:0008966,GO:0009252;gene=glmM;Parent=GCA000560365_02250_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1109,COG:G,RefSeq:WP_000521491.1,SO:0001217,UniParc:UPI0000054627,UniRef:UniRef100_P0C0V7,UniRef:UniRef50_P0C0V7,UniRef:UniRef90_P0C0V7;ec_number=5.4.2.10
contig_1	Pyrodigal	gene	2291764	2292696	.	-	.	ID=GCA000560365_02251_gene;locus_tag=GCA000560365_02251;gene=ybbR
contig_1	Pyrodigal	CDS	2291764	2292696	.	-	0	ID=GCA000560365_02251;Name=YbbR-like domain-containing protein;locus_tag=GCA000560365_02251;product=YbbR-like domain-containing protein;gene=ybbR;Parent=GCA000560365_02251_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4856,COG:T,RefSeq:WP_000894032.1,SO:0001217,UniParc:UPI0000054628,UniRef:UniRef100_Q2FW93,UniRef:UniRef50_A0A2T4S925,UniRef:UniRef90_Q2FW93
contig_1	Pyrodigal	gene	2292698	2293507	.	-	.	ID=GCA000560365_02252_gene;locus_tag=GCA000560365_02252;gene=cdaA
contig_1	Pyrodigal	CDS	2292698	2293507	.	-	0	ID=GCA000560365_02252;Name=diadenylate cyclase CdaA;locus_tag=GCA000560365_02252;product=diadenylate cyclase CdaA;Dbxref=GO:0004016,GO:0006171;gene=cdaA;Parent=GCA000560365_02252_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1642,COG:T,KEGG:K18672,RefSeq:WP_000347896.1,SO:0001217,UniParc:UPI0000054629,UniRef:UniRef100_Q2FW92,UniRef:UniRef50_A0A223KXB4,UniRef:UniRef90_A0A898CM21;ec_number=2.7.7.85
contig_1	Pyrodigal	gene	2293696	2294604	.	-	.	ID=GCA000560365_02253_gene;locus_tag=GCA000560365_02253;gene=rocF
contig_1	Pyrodigal	CDS	2293696	2294604	.	-	0	ID=GCA000560365_02253;Name=arginase;locus_tag=GCA000560365_02253;product=arginase;Dbxref=GO:0000050,GO:0004053,GO:0005737,GO:0019547,GO:0030145,GO:0046872;gene=rocF;Parent=GCA000560365_02253_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0010,COG:E,KEGG:K01476,RefSeq:WP_000167867.1,SO:0001217,UniParc:UPI000005462A,UniRef:UniRef100_P60086,UniRef:UniRef50_P60086,UniRef:UniRef90_P60086;ec_number=3.5.3.1
contig_1	Infernal	gene	2294764	2294821	.	-	.	ID=GCA000560365_02254_gene;locus_tag=GCA000560365_02254;gene=sau-5949
contig_1	Infernal	ncRNA	2294764	2294821	3.3e-12	-	.	ID=GCA000560365_02254;Name=Staphylococcus sRNA sau-5949;locus_tag=GCA000560365_02254;product=Staphylococcus sRNA sau-5949;Dbxref=RFAM:RF02396;Parent=GCA000560365_02254_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02396
contig_1	Pyrodigal	gene	2294830	2296032	.	+	.	ID=GCA000560365_02255_gene;locus_tag=GCA000560365_02255;gene=tnp
contig_1	Pyrodigal	CDS	2294830	2296032	.	+	0	ID=GCA000560365_02255;Name=ISL3 family IS1181 transposase;locus_tag=GCA000560365_02255;product=ISL3 family IS1181 transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000560365_02255_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3464,COG:X,IS:IS1181,KEGG:K07485,RefSeq:WP_001550301.1,SO:0001217,UniParc:UPI000069AAF3,UniRef:UniRef100_Q2FW90,UniRef:UniRef50_A0A380DS67,UniRef:UniRef90_A0A380DS67
contig_1	tRNAscan-SE	gene	2296263	2296335	.	-	.	ID=GCA000560365_02256_gene;locus_tag=GCA000560365_02256;gene=trnK
contig_1	tRNAscan-SE	tRNA	2296263	2296335	.	-	.	ID=GCA000560365_02256;Name=tRNA-Lys(ttt);locus_tag=GCA000560365_02256;product=tRNA-Lys(ttt);gene=trnK;anti_codon=ttt;amino_acid=Lys;Parent=GCA000560365_02256_gene;inference=profile:tRNAscan:2.0;Note=SO:0000265
contig_1	tRNAscan-SE	gene	2296339	2296413	.	-	.	ID=GCA000560365_02257_gene;locus_tag=GCA000560365_02257;gene=trnQ
contig_1	tRNAscan-SE	tRNA	2296339	2296413	.	-	.	ID=GCA000560365_02257;Name=tRNA-Gln(ttg);locus_tag=GCA000560365_02257;product=tRNA-Gln(ttg);gene=trnQ;anti_codon=ttg;amino_acid=Gln;Parent=GCA000560365_02257_gene;inference=profile:tRNAscan:2.0;Note=SO:0000261
contig_1	tRNAscan-SE	gene	2296423	2296506	.	-	.	ID=GCA000560365_02258_gene;locus_tag=GCA000560365_02258;gene=trnY
contig_1	tRNAscan-SE	tRNA	2296423	2296506	.	-	.	ID=GCA000560365_02258;Name=tRNA-Tyr(gta);locus_tag=GCA000560365_02258;product=tRNA-Tyr(gta);gene=trnY;anti_codon=gta;amino_acid=Tyr;Parent=GCA000560365_02258_gene;inference=profile:tRNAscan:2.0;Note=SO:0000272
contig_1	tRNAscan-SE	gene	2296536	2296611	.	-	.	ID=GCA000560365_02259_gene;locus_tag=GCA000560365_02259;gene=trnV
contig_1	tRNAscan-SE	tRNA	2296536	2296611	.	-	.	ID=GCA000560365_02259;Name=tRNA-Val(tac);locus_tag=GCA000560365_02259;product=tRNA-Val(tac);gene=trnV;anti_codon=tac;amino_acid=Val;Parent=GCA000560365_02259_gene;inference=profile:tRNAscan:2.0;Note=SO:0000273
contig_1	tRNAscan-SE	gene	2296619	2296690	.	-	.	ID=GCA000560365_02260_gene;locus_tag=GCA000560365_02260;gene=trnE
contig_1	tRNAscan-SE	tRNA	2296619	2296690	.	-	.	ID=GCA000560365_02260;Name=tRNA-Glu(ttc);locus_tag=GCA000560365_02260;product=tRNA-Glu(ttc);gene=trnE;anti_codon=ttc;amino_acid=Glu;Parent=GCA000560365_02260_gene;inference=profile:tRNAscan:2.0;Note=SO:0000259
contig_1	tRNAscan-SE	gene	2296692	2296766	.	-	.	ID=GCA000560365_02261_gene;locus_tag=GCA000560365_02261;gene=trnN
contig_1	tRNAscan-SE	tRNA	2296692	2296766	.	-	.	ID=GCA000560365_02261;Name=tRNA-Asn(gtt);locus_tag=GCA000560365_02261;product=tRNA-Asn(gtt);gene=trnN;anti_codon=gtt;amino_acid=Asn;Parent=GCA000560365_02261_gene;inference=profile:tRNAscan:2.0;Note=SO:0000257
contig_1	Infernal	gene	2296777	2296891	.	-	.	ID=GCA000560365_02262_gene;locus_tag=GCA000560365_02262;gene=rrf
contig_1	Infernal	rRNA	2296777	2296891	1.1e-14	-	.	ID=GCA000560365_02262;Name=5S ribosomal RNA;locus_tag=GCA000560365_02262;gene=rrf;product=5S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00001;Parent=GCA000560365_02262_gene;Note=KEGG:K01985,SO:0000652;inference=profile:Rfam:RF00001
contig_1	Infernal	gene	2296964	2299886	.	-	.	ID=GCA000560365_02263_gene;locus_tag=GCA000560365_02263;gene=rrl
contig_1	Infernal	rRNA	2296964	2299886	1.4e-06	-	.	ID=GCA000560365_02263;Name=23S ribosomal RNA;locus_tag=GCA000560365_02263;gene=rrl;product=23S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF02541;Parent=GCA000560365_02263_gene;Note=KEGG:K01980,SO:0001001;inference=profile:Rfam:RF02541
contig_1	Infernal	gene	2300191	2301742	.	-	.	ID=GCA000560365_02264_gene;locus_tag=GCA000560365_02264;gene=rrs
contig_1	Infernal	rRNA	2300191	2301742	1.3e-49	-	.	ID=GCA000560365_02264;Name=16S ribosomal RNA;locus_tag=GCA000560365_02264;gene=rrs;product=16S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00177;Parent=GCA000560365_02264_gene;Note=KEGG:K01977,SO:0001000;inference=profile:Rfam:RF00177
contig_1	Pyrodigal	gene	2302199	2303263	.	-	.	ID=GCA000560365_02265_gene;locus_tag=GCA000560365_02265;gene=mrp
contig_1	Pyrodigal	CDS	2302199	2303263	.	-	0	ID=GCA000560365_02265;Name=Iron-sulfur cluster carrier protein;locus_tag=GCA000560365_02265;product=Iron-sulfur cluster carrier protein;gene=mrp;Parent=GCA000560365_02265_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0489,COG:D,RefSeq:WP_000958531.1,SO:0001217,UniParc:UPI00000D7766,UniRef:UniRef100_A0A380EMC4,UniRef:UniRef50_P50863,UniRef:UniRef90_A0A7U7JQN2
contig_1	Pyrodigal	gene	2303411	2304853	.	-	.	ID=GCA000560365_02266_gene;locus_tag=GCA000560365_02266;gene=lmrS
contig_1	Pyrodigal	CDS	2303411	2304853	.	-	0	ID=GCA000560365_02266;Name=multidrug efflux MFS transporter LmrS;locus_tag=GCA000560365_02266;product=multidrug efflux MFS transporter LmrS;gene=lmrS;Parent=GCA000560365_02266_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001140999,COG:COG2814,COG:G,KEGG:K18934,NCBIProtein:AAW38464.1,RefSeq:WP_001140995.1,SO:0001217,UniParc:UPI0000696CBD,UniRef:UniRef100_A0A5A8VCB8,UniRef:UniRef50_Q2FW85,UniRef:UniRef90_Q2FW85
contig_1	Pyrodigal	gene	2305175	2305642	.	-	.	ID=GCA000560365_02267_gene;locus_tag=GCA000560365_02267;gene=sepA
contig_1	Pyrodigal	CDS	2305175	2305642	.	-	0	ID=GCA000560365_02267;Name=multidrug efflux transporter SepA;locus_tag=GCA000560365_02267;product=multidrug efflux transporter SepA;Dbxref=GO:0005886;gene=sepA;Parent=GCA000560365_02267_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_011382353,SO:0001217,UniParc:UPI00006E6025,UniRef:UniRef100_A0A2Y2NE66,UniRef:UniRef50_Q5HM62,UniRef:UniRef90_Q2FW84
contig_1	Pyrodigal	gene	2305747	2307090	.	-	.	ID=GCA000560365_02268_gene;locus_tag=GCA000560365_02268;gene=sdrM
contig_1	Pyrodigal	CDS	2305747	2307090	.	-	0	ID=GCA000560365_02268;Name=multidrug efflux MFS transporter SdrM;locus_tag=GCA000560365_02268;product=multidrug efflux MFS transporter SdrM;Dbxref=GO:0005886,GO:0022857,GO:0046677;gene=sdrM;Parent=GCA000560365_02268_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2814,COG:G,KEGG:K18935,RefSeq:WP_001237506.1,SO:0001217,UniParc:UPI0000054BD8,UniRef:UniRef100_Q99S97,UniRef:UniRef50_Q99S97,UniRef:UniRef90_Q99S97
contig_1	Pyrodigal	gene	2307267	2307953	.	-	.	ID=GCA000560365_02269_gene;locus_tag=GCA000560365_02269;gene=yqfA
contig_1	Pyrodigal	CDS	2307267	2307953	.	-	0	ID=GCA000560365_02269;Name=Hemolysin III;locus_tag=GCA000560365_02269;product=Hemolysin III;gene=yqfA;Parent=GCA000560365_02269_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1272,COG:U,SO:0001217,UniParc:UPI00000D0F2C,UniRef:UniRef100_Q2FW82,UniRef:UniRef50_Q2FW82,UniRef:UniRef90_Q2FW82
contig_1	Pyrodigal	gene	2307969	2309156	.	-	.	ID=GCA000560365_02270_gene;locus_tag=GCA000560365_02270;gene=qRI1
contig_1	Pyrodigal	CDS	2307969	2309156	.	-	0	ID=GCA000560365_02270;Name=putative uridylyltransferase MW2097;locus_tag=GCA000560365_02270;product=putative uridylyltransferase MW2097;Dbxref=GO:0070569;gene=qRI1;Parent=GCA000560365_02270_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4284,COG:G,KEGG:K11442,RefSeq:WP_000884739.1,SO:0001217,UniParc:UPI00004B5C89,UniRef:UniRef100_Q2FW81,UniRef:UniRef50_Q2FW81,UniRef:UniRef90_Q2FW81;ec_number=2.7.7.-
contig_1	Pyrodigal	gene	2309200	2309715	.	-	.	ID=GCA000560365_02271_gene;locus_tag=GCA000560365_02271;gene=ybcI
contig_1	Pyrodigal	CDS	2309200	2309715	.	-	0	ID=GCA000560365_02271;Name=Metal-dependent hydrolase;locus_tag=GCA000560365_02271;product=Metal-dependent hydrolase;gene=ybcI;Parent=GCA000560365_02271_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1988,COG:R,KEGG:K07038,RefSeq:WP_000147094.1,SO:0001217,UniParc:UPI0000054BDC,UniRef:UniRef100_Q2FW80,UniRef:UniRef50_Q2FW80,UniRef:UniRef90_Q2FW80
contig_1	Pyrodigal	gene	2309892	2310152	.	+	.	ID=GCA000560365_02272_gene;locus_tag=GCA000560365_02272
contig_1	Pyrodigal	CDS	2309892	2310152	.	+	0	ID=GCA000560365_02272;Name=UPF0457 protein SAR2264;locus_tag=GCA000560365_02272;product=UPF0457 protein SAR2264;Parent=GCA000560365_02272_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001251935.1,SO:0001217,UniParc:UPI0000054BDD,UniRef:UniRef100_Q2FW79,UniRef:UniRef50_Q2FW79,UniRef:UniRef90_Q2FW79
contig_1	Pyrodigal	gene	2310284	2311654	.	-	.	ID=GCA000560365_02273_gene;locus_tag=GCA000560365_02273;gene=spoVV
contig_1	Pyrodigal	CDS	2310284	2311654	.	-	0	ID=GCA000560365_02273;Name=Nucleoside transporter/FeoB GTPase Gate domain-containing protein;locus_tag=GCA000560365_02273;product=Nucleoside transporter/FeoB GTPase Gate domain-containing protein;gene=spoVV;Parent=GCA000560365_02273_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3314,COG:DE,RefSeq:WP_001549577.1,SO:0001217,UniParc:UPI0000054BDE,UniRef:UniRef100_Q2FW78,UniRef:UniRef50_B9DM72,UniRef:UniRef90_A0A7U7PWQ6
contig_1	Pyrodigal	gene	2311890	2312858	.	-	.	ID=GCA000560365_02274_gene;locus_tag=GCA000560365_02274;gene=fepD
contig_1	Pyrodigal	CDS	2311890	2312858	.	-	0	ID=GCA000560365_02274;Name=Heme ABC type transporter HtsABC%2C permease protein HtsC;locus_tag=GCA000560365_02274;product=Heme ABC type transporter HtsABC%2C permease protein HtsC;gene=fepD;Parent=GCA000560365_02274_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0609,COG:P,RefSeq:WP_000989091.1,SO:0001217,UniParc:UPI0000054BDF,UniRef:UniRef100_Q2FW77,UniRef:UniRef50_A0A2K4AJP4,UniRef:UniRef90_A0A2K4AJP4
contig_1	Pyrodigal	gene	2312855	2313886	.	-	.	ID=GCA000560365_02275_gene;locus_tag=GCA000560365_02275;gene=fepD
contig_1	Pyrodigal	CDS	2312855	2313886	.	-	0	ID=GCA000560365_02275;Name=Iron-dicitrate ABC transporter (Permease);locus_tag=GCA000560365_02275;product=Iron-dicitrate ABC transporter (Permease);gene=fepD;Parent=GCA000560365_02275_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0609,COG:P,RefSeq:WP_000974906.1,SO:0001217,UniParc:UPI0000054BE0,UniRef:UniRef100_Q2FW76,UniRef:UniRef50_A0A380G4K5,UniRef:UniRef90_A0A0U1MRT1
contig_1	Pyrodigal	gene	2313898	2314881	.	-	.	ID=GCA000560365_02276_gene;locus_tag=GCA000560365_02276;gene=fecB
contig_1	Pyrodigal	CDS	2313898	2314881	.	-	0	ID=GCA000560365_02276;Name=Iron-dicitrate ABC transporter (Binding lipoprotein);locus_tag=GCA000560365_02276;product=Iron-dicitrate ABC transporter (Binding lipoprotein);gene=fecB;Parent=GCA000560365_02276_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4594,COG:P,KEGG:K23181,RefSeq:WP_001214661.1,SO:0001217,UniParc:UPI00000CAB53,UniRef:UniRef100_Q2FW75,UniRef:UniRef50_S2Y8V6,UniRef:UniRef90_A0A0U1MR80
contig_1	Pyrodigal	gene	2315273	2316343	.	-	.	ID=GCA000560365_02277_gene;locus_tag=GCA000560365_02277;gene=sfaC
contig_1	Pyrodigal	CDS	2315273	2316343	.	-	0	ID=GCA000560365_02277;Name=staphyloferrin A biosynthesis protein SfaC;locus_tag=GCA000560365_02277;product=staphyloferrin A biosynthesis protein SfaC;gene=sfaC;Parent=GCA000560365_02277_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000951636,COG:COG3457,COG:E,KEGG:K21898,RefSeq:WP_000951636.1,SO:0001217,UniParc:UPI0000054BE2,UniRef:UniRef100_Q2FW73,UniRef:UniRef50_Q2FW73,UniRef:UniRef90_Q2FW73;ec_number=5.1.1.12
contig_1	Pyrodigal	gene	2316350	2318107	.	-	.	ID=GCA000560365_02278_gene;locus_tag=GCA000560365_02278;gene=sfaB
contig_1	Pyrodigal	CDS	2316350	2318107	.	-	0	ID=GCA000560365_02278;Name=staphyloferrin A synthetase SfaB;locus_tag=GCA000560365_02278;product=staphyloferrin A synthetase SfaB;Dbxref=GO:0005524,GO:0016874,GO:0019290;gene=sfaB;Parent=GCA000560365_02278_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000262640,COG:COG4264,COG:P,KEGG:K23447,RefSeq:WP_000262640.1,SO:0001217,UniParc:UPI0000054BE3,UniRef:UniRef100_Q2FW72,UniRef:UniRef50_Q2FW72,UniRef:UniRef90_Q2FW72;ec_number=6.3.2.57
contig_1	Pyrodigal	gene	2318094	2319287	.	-	.	ID=GCA000560365_02279_gene;locus_tag=GCA000560365_02279;gene=sfaA
contig_1	Pyrodigal	CDS	2318094	2319287	.	-	0	ID=GCA000560365_02279;Name=staphyloferrin A export MFS transporter;locus_tag=GCA000560365_02279;product=staphyloferrin A export MFS transporter;Dbxref=GO:0005886,GO:0022857;gene=sfaA;Parent=GCA000560365_02279_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000170403,KEGG:K23448,RefSeq:WP_000170403.1,SO:0001217,UniParc:UPI0000054BE4,UniRef:UniRef100_Q2FW71,UniRef:UniRef50_Q2FW71,UniRef:UniRef90_Q2FW71
contig_1	Pyrodigal	gene	2319389	2321365	.	+	.	ID=GCA000560365_02280_gene;locus_tag=GCA000560365_02280;gene=sfaD
contig_1	Pyrodigal	CDS	2319389	2321365	.	+	0	ID=GCA000560365_02280;Name=D-ornithine--citrate ligase SfaD;locus_tag=GCA000560365_02280;product=D-ornithine--citrate ligase SfaD;Dbxref=GO:0005524,GO:0016874,GO:0019290;gene=sfaD;Parent=GCA000560365_02280_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001052566,COG:COG4264,COG:P,KEGG:K23446,RefSeq:WP_001052566.1,SO:0001217,UniParc:UPI00004B5C8B,UniRef:UniRef100_A0A0E7QLN2,UniRef:UniRef50_Q2FW70,UniRef:UniRef90_Q2FW70;ec_number=6.3.2.58
contig_1	Infernal	gene	2321547	2321784	.	-	.	ID=GCA000560365_02281_gene;locus_tag=GCA000560365_02281;gene=tsr24
contig_1	Infernal	ncRNA	2321547	2321784	1.4e-36	-	.	ID=GCA000560365_02281;Name=S. aureus tsr24 small RNA;locus_tag=GCA000560365_02281;product=S. aureus tsr24 small RNA;Dbxref=RFAM:RF02577;Parent=GCA000560365_02281_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02577
contig_1	Pyrodigal	gene	2321821	2322621	.	+	.	ID=GCA000560365_02282_gene;locus_tag=GCA000560365_02282;gene=insH
contig_1	Pyrodigal	CDS	2321821	2322621	.	+	0	ID=GCA000560365_02282;Name=Transposase InsH N-terminal domain-containing protein;locus_tag=GCA000560365_02282;product=Transposase InsH N-terminal domain-containing protein;gene=insH;Parent=GCA000560365_02282_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000069AB39,UniRef:UniRef100_Q2FW69,UniRef:UniRef50_A0A5S9I4R9,UniRef:UniRef90_Q2FW69
contig_1	Pyrodigal	gene	2322639	2322938	.	+	.	ID=GCA000560365_02283_gene;locus_tag=GCA000560365_02283;gene=tnp
contig_1	Pyrodigal	CDS	2322639	2322938	.	+	0	ID=GCA000560365_02283;Name=IS1182 family transposase;locus_tag=GCA000560365_02283;product=IS1182 family transposase;Dbxref=GO:0004803;gene=tnp;Parent=GCA000560365_02283_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07487,SO:0001217,UniParc:UPI000069AB3A,UniRef:UniRef100_Q2FW68,UniRef:UniRef50_A0A9P2Z0V2,UniRef:UniRef90_Q2FW68
contig_1	Pyrodigal	gene	2323101	2323445	.	+	.	ID=GCA000560365_02284_gene;locus_tag=GCA000560365_02284
contig_1	Pyrodigal	CDS	2323101	2323445	.	+	0	ID=GCA000560365_02284;Name=IS1182 family transposase;locus_tag=GCA000560365_02284;product=IS1182 family transposase;Dbxref=GO:0004803;Parent=GCA000560365_02284_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07487,SO:0001217,UniParc:UPI000069AB3B,UniRef:UniRef100_Q2FW67,UniRef:UniRef50_A0A9P2Z0V2,UniRef:UniRef90_A0AAN1ZQC3
contig_1	Pyrodigal	gene	2323481	2323990	.	-	.	ID=GCA000560365_02285_gene;locus_tag=GCA000560365_02285;gene=asp23
contig_1	Pyrodigal	CDS	2323481	2323990	.	-	0	ID=GCA000560365_02285;Name=Alkaline shock protein 23;locus_tag=GCA000560365_02285;product=Alkaline shock protein 23;gene=asp23;Parent=GCA000560365_02285_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1302,COG:S,RefSeq:WP_000215236.1,SO:0001217,UniParc:UPI0000054BEA,UniRef:UniRef100_Q2FW66,UniRef:UniRef50_Q2FW66,UniRef:UniRef90_Q2FW66
contig_1	Pyrodigal	gene	2324053	2324292	.	-	.	ID=GCA000560365_02286_gene;locus_tag=GCA000560365_02286
contig_1	Pyrodigal	CDS	2324053	2324292	.	-	0	ID=GCA000560365_02286;Name=DUF2273 domain-containing protein;locus_tag=GCA000560365_02286;product=DUF2273 domain-containing protein;Parent=GCA000560365_02286_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5547,COG:S,RefSeq:WP_000002683.1,SO:0001217,UniParc:UPI0000054BEB,UniRef:UniRef100_Q2FW65,UniRef:UniRef50_Q2FW65,UniRef:UniRef90_Q2FW65
contig_1	Pyrodigal	gene	2324305	2324841	.	-	.	ID=GCA000560365_02287_gene;locus_tag=GCA000560365_02287;gene=amaP
contig_1	Pyrodigal	CDS	2324305	2324841	.	-	0	ID=GCA000560365_02287;Name=alkaline shock response membrane anchor protein AmaP;locus_tag=GCA000560365_02287;product=alkaline shock response membrane anchor protein AmaP;gene=amaP;Parent=GCA000560365_02287_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000825819.1,SO:0001217,UniParc:UPI00000D7671,UniRef:UniRef100_Q2FW64,UniRef:UniRef50_Q2FW64,UniRef:UniRef90_Q2FW64
contig_1	Pyrodigal	gene	2325016	2326578	.	-	.	ID=GCA000560365_02288_gene;locus_tag=GCA000560365_02288;gene=betT
contig_1	Pyrodigal	CDS	2325016	2326578	.	-	0	ID=GCA000560365_02288;Name=BCCT family transporter;locus_tag=GCA000560365_02288;product=BCCT family transporter;gene=betT;Parent=GCA000560365_02288_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1292,COG:M,RefSeq:WP_000792345.1,SO:0001217,UniParc:UPI0000054BED,UniRef:UniRef100_Q2FW63,UniRef:UniRef50_A0A9X4QYP5,UniRef:UniRef90_Q7BJZ6
contig_1	Pyrodigal	gene	2326885	2327886	.	-	.	ID=GCA000560365_02289_gene;locus_tag=GCA000560365_02289;gene=qor
contig_1	Pyrodigal	CDS	2326885	2327886	.	-	0	ID=GCA000560365_02289;Name=Zinc-type alcohol dehydrogenase-like protein MW2112;locus_tag=GCA000560365_02289;product=Zinc-type alcohol dehydrogenase-like protein MW2112;Dbxref=GO:0008270,GO:0016491;gene=qor;Parent=GCA000560365_02289_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0604,COG:CR,RefSeq:WP_000781945.1,SO:0001217,UniParc:UPI0000054BEE,UniRef:UniRef100_Q5HE19,UniRef:UniRef50_Q5HM44,UniRef:UniRef90_P63475
contig_1	Pyrodigal	gene	2328120	2329124	.	-	.	ID=GCA000560365_02290_gene;locus_tag=GCA000560365_02290;gene=curA
contig_1	Pyrodigal	CDS	2328120	2329124	.	-	0	ID=GCA000560365_02290;Name=Quinone oxidoreductase;locus_tag=GCA000560365_02290;product=Quinone oxidoreductase;gene=curA;Parent=GCA000560365_02290_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2130,COG:QR,SO:0001217,UniParc:UPI0000054BF0,UniRef:UniRef100_Q2G2D7,UniRef:UniRef50_A0A1H5ZK44,UniRef:UniRef90_A0A7I8NIX0
contig_1	Pyrodigal	gene	2329404	2330273	.	-	.	ID=GCA000560365_02291_gene;locus_tag=GCA000560365_02291
contig_1	Pyrodigal	CDS	2329404	2330273	.	-	0	ID=GCA000560365_02291;Name=Alpha/beta hydrolase;locus_tag=GCA000560365_02291;product=Alpha/beta hydrolase;Parent=GCA000560365_02291_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4814,COG:S,RefSeq:WP_000719324.1,SO:0001217,UniParc:UPI0000696CBF,UniRef:UniRef100_A0A2C9TQK5,UniRef:UniRef50_Q2G2D6,UniRef:UniRef90_Q2G2D6
contig_1	Pyrodigal	gene	2330539	2331951	.	-	.	ID=GCA000560365_02292_gene;locus_tag=GCA000560365_02292;gene=lacG
contig_1	Pyrodigal	CDS	2330539	2331951	.	-	0	ID=GCA000560365_02292;Name=6-phospho-beta-galactosidase;locus_tag=GCA000560365_02292;product=6-phospho-beta-galactosidase;Dbxref=GO:0005829,GO:0008422,GO:0019512,GO:0033920;gene=lacG;Parent=GCA000560365_02292_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2723,COG:G,RefSeq:WP_000169220.1,SO:0001217,UniParc:UPI0000054BF2,UniRef:UniRef100_Q2G2D5,UniRef:UniRef50_C7N8L9,UniRef:UniRef90_Q2G2D5;ec_number=3.2.1.85
contig_1	Pyrodigal	gene	2331969	2333681	.	-	.	ID=GCA000560365_02293_gene;locus_tag=GCA000560365_02293;gene=lacE
contig_1	Pyrodigal	CDS	2331969	2333681	.	-	0	ID=GCA000560365_02293;Name=lactose-specific PTS transporter subunit EIIC;locus_tag=GCA000560365_02293;product=lactose-specific PTS transporter subunit EIIC;Dbxref=GO:0005886,GO:0009401,GO:0015155,GO:0016020,GO:0016301,GO:0019197,GO:0022869,GO:1901264;gene=lacE;Parent=GCA000560365_02293_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1455,COG:G,KEGG:K02788,RefSeq:WP_000983330.1,SO:0001217,UniParc:UPI00000D772D,UniRef:UniRef100_Q5HE15,UniRef:UniRef50_P11162,UniRef:UniRef90_P11162;ec_number=2.7.1.207
contig_1	Pyrodigal	gene	2333687	2333998	.	-	.	ID=GCA000560365_02294_gene;locus_tag=GCA000560365_02294;gene=lacF
contig_1	Pyrodigal	CDS	2333687	2333998	.	-	0	ID=GCA000560365_02294;Name=PTS system lactose-specific EIIA component;locus_tag=GCA000560365_02294;product=PTS system lactose-specific EIIA component;Dbxref=GO:0005737,GO:0009401,GO:0016740,GO:0046872;gene=lacF;Parent=GCA000560365_02294_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1447,COG:G,KEGG:K02786,RefSeq:WP_001078309.1,SO:0001217,UniParc:UPI0000054BF4,UniRef:UniRef100_Q5HE14,UniRef:UniRef50_P23532,UniRef:UniRef90_Q5HE14;ec_number=2.7.1.207
contig_1	Pyrodigal	gene	2334020	2335000	.	-	.	ID=GCA000560365_02295_gene;locus_tag=GCA000560365_02295;gene=lacD
contig_1	Pyrodigal	CDS	2334020	2335000	.	-	0	ID=GCA000560365_02295;Name=tagatose-bisphosphate aldolase;locus_tag=GCA000560365_02295;product=tagatose-bisphosphate aldolase;Dbxref=GO:0009024,GO:0009025,GO:0019512,GO:0061595,GO:1902777,GO:2001059;gene=lacD;Parent=GCA000560365_02295_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3684,COG:GP,KEGG:K01635,RefSeq:WP_000047009.1,SO:0001217,UniParc:UPI0000054BF5,UniRef:UniRef100_P0A011,UniRef:UniRef50_P26593,UniRef:UniRef90_P0A011;ec_number=4.1.2.40
contig_1	Pyrodigal	gene	2335004	2335936	.	-	.	ID=GCA000560365_02296_gene;locus_tag=GCA000560365_02296;gene=lacC
contig_1	Pyrodigal	CDS	2335004	2335936	.	-	0	ID=GCA000560365_02296;Name=tagatose-6-phosphate kinase;locus_tag=GCA000560365_02296;product=tagatose-6-phosphate kinase;Dbxref=GO:0005524,GO:0005829,GO:0008443,GO:0009024,GO:0019512,GO:2001059;gene=lacC;Parent=GCA000560365_02296_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1105,COG:G,KEGG:K00917,RefSeq:WP_000604135.1,SO:0001217,UniParc:UPI0000054BF6,UniRef:UniRef100_P0A0B9,UniRef:UniRef50_P0A0B9,UniRef:UniRef90_P0A0B9;ec_number=2.7.1.144
contig_1	Pyrodigal	gene	2335949	2336464	.	-	.	ID=GCA000560365_02297_gene;locus_tag=GCA000560365_02297;gene=lacB
contig_1	Pyrodigal	CDS	2335949	2336464	.	-	0	ID=GCA000560365_02297;Name=galactose-6-phosphate isomerase subunit LacB;locus_tag=GCA000560365_02297;product=galactose-6-phosphate isomerase subunit LacB;Dbxref=GO:0004751,GO:0009052,GO:0016861,GO:0019316,GO:0019388,GO:0019512,GO:0050044;gene=lacB;Parent=GCA000560365_02297_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0698,COG:G,RefSeq:WP_000684746.1,SO:0001217,UniParc:UPI0000054BF7,UniRef:UniRef100_Q2G2R0,UniRef:UniRef50_P23495,UniRef:UniRef90_Q2G2R0;ec_number=5.3.1.26
contig_1	Pyrodigal	gene	2336480	2336908	.	-	.	ID=GCA000560365_02298_gene;locus_tag=GCA000560365_02298;gene=lacA
contig_1	Pyrodigal	CDS	2336480	2336908	.	-	0	ID=GCA000560365_02298;Name=galactose-6-phosphate isomerase subunit LacA;locus_tag=GCA000560365_02298;product=galactose-6-phosphate isomerase subunit LacA;Dbxref=GO:0004751,GO:0009052,GO:0019316,GO:0019388,GO:0019512,GO:0050044;gene=lacA;Parent=GCA000560365_02298_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0698,COG:G,KEGG:K01819,RefSeq:WP_000974608.1,SO:0001217,UniParc:UPI0000054BF8,UniRef:UniRef100_Q2G2R4,UniRef:UniRef50_Q2G2R4,UniRef:UniRef90_Q2G2R4;ec_number=5.3.1.26
contig_1	Pyrodigal	gene	2337276	2338031	.	-	.	ID=GCA000560365_02299_gene;locus_tag=GCA000560365_02299;gene=lacR
contig_1	Pyrodigal	CDS	2337276	2338031	.	-	0	ID=GCA000560365_02299;Name=Lactose phosphotransferase system repressor;locus_tag=GCA000560365_02299;product=Lactose phosphotransferase system repressor;Dbxref=GO:0003677,GO:0003700,GO:0005988;gene=lacR;Parent=GCA000560365_02299_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02530,RefSeq:WP_001032739.1,SO:0001217,UniParc:UPI000012E1E8,UniRef:UniRef100_P0A0Q0,UniRef:UniRef50_P0A0Q0,UniRef:UniRef90_P0A0Q0
contig_1	Pyrodigal	gene	2338273	2339013	.	+	.	ID=GCA000560365_02300_gene;locus_tag=GCA000560365_02300;gene=cobB
contig_1	Pyrodigal	CDS	2338273	2339013	.	+	0	ID=GCA000560365_02300;Name=NAD-dependent protein deacylase;locus_tag=GCA000560365_02300;product=NAD-dependent protein deacylase;Dbxref=GO:0005737,GO:0008270,GO:0032041,GO:0034979,GO:0046969,GO:0046970,GO:0051287,GO:0070403,GO:0097372,GO:0140765,GO:0141222;gene=cobB;Parent=GCA000560365_02300_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0846,COG:O,RefSeq:WP_001549592.1,SO:0001217,UniParc:UPI000069AB3C,UniRef:UniRef100_A0A2P0A8H1,UniRef:UniRef50_P66815,UniRef:UniRef90_P66815;ec_number=2.3.1.286
contig_1	Pyrodigal	gene	2339304	2339738	.	-	.	ID=GCA000560365_02301_gene;locus_tag=GCA000560365_02301
contig_1	Pyrodigal	CDS	2339304	2339738	.	-	0	ID=GCA000560365_02301;Name=hypothetical protein;locus_tag=GCA000560365_02301;product=hypothetical protein;Parent=GCA000560365_02301_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000696CC0,UniRef:UniRef100_A0A0H2XEJ0,UniRef:UniRef50_A0A0H2XEJ0,UniRef:UniRef90_A0A0H2XEJ0,PFAM:PF13021.12
contig_1	Pyrodigal	gene	2340173	2340298	.	-	.	ID=GCA000560365_02302_gene;locus_tag=GCA000560365_02302
contig_1	Pyrodigal	CDS	2340173	2340298	.	-	0	ID=GCA000560365_02302;Name=Doubtful CDS No database matches;locus_tag=GCA000560365_02302;product=Doubtful CDS No database matches;Parent=GCA000560365_02302_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001549596.1,SO:0001217,UniParc:UPI0000054BFD,UniRef:UniRef100_Q2FW58,UniRef:UniRef50_Q2FW58,UniRef:UniRef90_Q2FW58
contig_1	Pyrodigal	gene	2340518	2341366	.	-	.	ID=GCA000560365_02303_gene;locus_tag=GCA000560365_02303;gene=aRA1
contig_1	Pyrodigal	CDS	2340518	2341366	.	-	0	ID=GCA000560365_02303;Name=Aldo/keto reductase;locus_tag=GCA000560365_02303;product=Aldo/keto reductase;gene=aRA1;Parent=GCA000560365_02303_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0656,COG:Q,RefSeq:WP_001015500.1,SO:0001217,UniParc:UPI0000054BFE,UniRef:UniRef100_Q2FW57,UniRef:UniRef50_A0A0U1MRZ3,UniRef:UniRef90_A0A0U1MRZ3
contig_1	Pyrodigal	gene	2341436	2341852	.	-	.	ID=GCA000560365_02304_gene;locus_tag=GCA000560365_02304;gene=soxR
contig_1	Pyrodigal	CDS	2341436	2341852	.	-	0	ID=GCA000560365_02304;Name=MerR family transcriptional regulator;locus_tag=GCA000560365_02304;product=MerR family transcriptional regulator;gene=soxR;Parent=GCA000560365_02304_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0789,COG:K,RefSeq:WP_000850012.1,SO:0001217,UniParc:UPI0000696CC1,UniRef:UniRef100_A0A1S5YP49,UniRef:UniRef50_R2R848,UniRef:UniRef90_A0A390R2I5
contig_1	Infernal	gene	2342090	2342240	.	+	.	ID=GCA000560365_02305_gene;locus_tag=GCA000560365_02305;gene=tsr32
contig_1	Infernal	ncRNA	2342090	2342240	1.9e-30	+	.	ID=GCA000560365_02305;Name=S. aureus tsr32 small RNA;locus_tag=GCA000560365_02305;product=S. aureus tsr32 small RNA;Dbxref=RFAM:RF02581;Parent=GCA000560365_02305_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02581
contig_1	Pyrodigal	gene	2342260	2344683	.	+	.	ID=GCA000560365_02306_gene;locus_tag=GCA000560365_02306;gene=hysA
contig_1	Pyrodigal	CDS	2342260	2344683	.	+	0	ID=GCA000560365_02306;Name=hyaluronate lyase HysA;locus_tag=GCA000560365_02306;product=hyaluronate lyase HysA;Dbxref=GO:0005576,GO:0005975,GO:0030246,GO:0030340;gene=hysA;Parent=GCA000560365_02306_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000222239,KEGG:K01727,RefSeq:WP_000222239.1,SO:0001217,UniParc:UPI000012D050,UniRef:UniRef100_Q59801,UniRef:UniRef50_Q59801,UniRef:UniRef90_Q59801;ec_number=4.2.2.1
contig_1	Pyrodigal	gene	2344743	2345597	.	-	.	ID=GCA000560365_02307_gene;locus_tag=GCA000560365_02307;gene=nlpD
contig_1	Pyrodigal	CDS	2344743	2345597	.	-	0	ID=GCA000560365_02307;Name=lysostaphin;locus_tag=GCA000560365_02307;product=lysostaphin;gene=nlpD;Parent=GCA000560365_02307_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0739,COG:M,RefSeq:WP_001044432.1,SO:0001217,UniParc:UPI0000054C01,UniRef:UniRef100_Q2FW53,UniRef:UniRef50_Q2FW53,UniRef:UniRef90_Q2FW53
contig_1	Pyrodigal	gene	2345808	2346623	.	-	.	ID=GCA000560365_02308_gene;locus_tag=GCA000560365_02308;gene=cof
contig_1	Pyrodigal	CDS	2345808	2346623	.	-	0	ID=GCA000560365_02308;Name=putative hydrolase in edin-B 3'region;locus_tag=GCA000560365_02308;product=putative hydrolase in edin-B 3'region;Dbxref=GO:0000287,GO:0005829,GO:0016791;gene=cof;Parent=GCA000560365_02308_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0561,COG:HR,RefSeq:WP_000044363.1,SO:0001217,UniParc:UPI00004B5C92,UniRef:UniRef100_Q2FW52,UniRef:UniRef50_Q8GAX4,UniRef:UniRef90_Q8GAX4;ec_number=3.-.-.-
contig_1	Pyrodigal	gene	2346917	2347342	.	+	.	ID=GCA000560365_02309_gene;locus_tag=GCA000560365_02309
contig_1	Pyrodigal	CDS	2346917	2347342	.	+	0	ID=GCA000560365_02309;Name=MAP domain-containing protein;locus_tag=GCA000560365_02309;product=MAP domain-containing protein;Parent=GCA000560365_02309_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001549607.1,SO:0001217,UniParc:UPI00000522A8,UniRef:UniRef100_Q2FW51,UniRef:UniRef50_A0A7U7JQY5,UniRef:UniRef90_A0A7U7JQY5
contig_1	Pyrodigal	gene	2347706	2348410	.	-	.	ID=GCA000560365_02310_gene;locus_tag=GCA000560365_02310;gene=budA
contig_1	Pyrodigal	CDS	2347706	2348410	.	-	0	ID=GCA000560365_02310;Name=acetolactate decarboxylase;locus_tag=GCA000560365_02310;product=acetolactate decarboxylase;Dbxref=GO:0045151,GO:0047605;gene=budA;Parent=GCA000560365_02310_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3527,COG:Q,RefSeq:WP_000186134.1,SO:0001217,UniParc:UPI00000CA9E8,UniRef:UniRef100_Q2FW50,UniRef:UniRef50_A0A641A785,UniRef:UniRef90_A0A0U1MRE6;ec_number=4.1.1.5
contig_1	Pyrodigal	gene	2348447	2350111	.	-	.	ID=GCA000560365_02311_gene;locus_tag=GCA000560365_02311;gene=alsS
contig_1	Pyrodigal	CDS	2348447	2350111	.	-	0	ID=GCA000560365_02311;Name=acetolactate synthase AlsS;locus_tag=GCA000560365_02311;product=acetolactate synthase AlsS;Dbxref=GO:0000287,GO:0003984,GO:0030976,GO:0034077;gene=alsS;Parent=GCA000560365_02311_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0028,COG:EH,RefSeq:WP_000130149.1,SO:0001217,UniParc:UPI00000CAB60,UniRef:UniRef100_A0A0D6WCP3,UniRef:UniRef50_A0A0U1MRE5,UniRef:UniRef90_A0A0D6WCP3;ec_number=2.2.1.6
contig_1	Pyrodigal	gene	2351301	2352707	.	-	.	ID=GCA000560365_02312_gene;locus_tag=GCA000560365_02312
contig_1	Pyrodigal	CDS	2351301	2352707	.	-	0	ID=GCA000560365_02312;Name=hypothetical protein;locus_tag=GCA000560365_02312;product=hypothetical protein;Parent=GCA000560365_02312_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001549616.1,SO:0001217,UniParc:UPI0000054C08,UniRef:UniRef100_Q2FW46,UniRef:UniRef50_Q2FW46,UniRef:UniRef90_Q2FW46
contig_1	Pyrodigal	gene	2352836	2353972	.	-	.	ID=GCA000560365_02313_gene;locus_tag=GCA000560365_02313
contig_1	Pyrodigal	CDS	2352836	2353972	.	-	0	ID=GCA000560365_02313;Name=AAA+ ATPase domain-containing protein;locus_tag=GCA000560365_02313;product=AAA+ ATPase domain-containing protein;Parent=GCA000560365_02313_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000402465.1,SO:0001217,UniParc:UPI0000054C09,UniRef:UniRef100_Q2FW45,UniRef:UniRef50_A0A0R1K3U4,UniRef:UniRef90_Q2FW45
contig_1	Pyrodigal	gene	2353973	2354764	.	-	.	ID=GCA000560365_02314_gene;locus_tag=GCA000560365_02314
contig_1	Pyrodigal	CDS	2353973	2354764	.	-	0	ID=GCA000560365_02314;Name=Phage tail protein;locus_tag=GCA000560365_02314;product=Phage tail protein;Parent=GCA000560365_02314_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000696CC2,UniRef:UniRef100_A0A0D6H5I9,UniRef:UniRef50_A0A7L8W7L6,UniRef:UniRef90_Q2FW43
contig_1	Pyrodigal	gene	2354777	2355070	.	-	.	ID=GCA000560365_02315_gene;locus_tag=GCA000560365_02315
contig_1	Pyrodigal	CDS	2354777	2355070	.	-	0	ID=GCA000560365_02315;Name=Type ISP restriction-modification enzyme LLaBIII C-terminal specificity domain-containing protein;locus_tag=GCA000560365_02315;product=Type ISP restriction-modification enzyme LLaBIII C-terminal specificity domain-containing protein;Parent=GCA000560365_02315_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001549623.1,SO:0001217,UniParc:UPI0000054C0B,UniRef:UniRef100_Q2FW42,UniRef:UniRef50_Q2FW42,UniRef:UniRef90_Q2FW42
contig_1	Pyrodigal	gene	2355067	2356164	.	-	.	ID=GCA000560365_02316_gene;locus_tag=GCA000560365_02316
contig_1	Pyrodigal	CDS	2355067	2356164	.	-	0	ID=GCA000560365_02316;Name=Type ISP restriction-modification enzyme LLaBIII C-terminal specificity domain-containing protein;locus_tag=GCA000560365_02316;product=Type ISP restriction-modification enzyme LLaBIII C-terminal specificity domain-containing protein;Parent=GCA000560365_02316_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001549626.1,SO:0001217,UniParc:UPI000069AB43,UniRef:UniRef100_Q2FW41,UniRef:UniRef50_Q2FW41,UniRef:UniRef90_Q2FW41
contig_1	Pyrodigal	gene	2356709	2357107	.	-	.	ID=GCA000560365_02317_gene;locus_tag=GCA000560365_02317;gene=rpsI
contig_1	Pyrodigal	CDS	2356709	2357107	.	-	0	ID=GCA000560365_02317;Name=30S ribosomal protein S9;locus_tag=GCA000560365_02317;product=30S ribosomal protein S9;Dbxref=GO:0003723,GO:0003735,GO:0005840,GO:0006412,GO:0022627;gene=rpsI;Parent=GCA000560365_02317_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0103,COG:J,KEGG:K02996,RefSeq:WP_000170975.1,SO:0001217,UniParc:UPI0000048023,UniRef:UniRef100_Q2FW39,UniRef:UniRef50_Q2FW39,UniRef:UniRef90_Q2FW39
contig_1	Pyrodigal	gene	2357121	2357558	.	-	.	ID=GCA000560365_02318_gene;locus_tag=GCA000560365_02318;gene=rplM
contig_1	Pyrodigal	CDS	2357121	2357558	.	-	0	ID=GCA000560365_02318;Name=50S ribosomal protein L13;locus_tag=GCA000560365_02318;product=50S ribosomal protein L13;Dbxref=GO:0003729,GO:0003735,GO:0005840,GO:0006412,GO:0017148,GO:0022625;gene=rplM;Parent=GCA000560365_02318_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0102,COG:J,KEGG:K02871,RefSeq:WP_001250038.1,SO:0001217,UniParc:UPI0000054B7F,UniRef:UniRef100_Q2FW38,UniRef:UniRef50_Q2FW38,UniRef:UniRef90_Q2FW38
contig_1	Infernal	regulatory_region	2357686	2357755	3.1e-09	-	.	ID=KMHODOBJJH_189;Name=Ribosomal protein L13 leader;product=Ribosomal protein L13 leader;Dbxref=RFAM:RF00555;inference=profile:Rfam:RF00555;Note=SO:0000140;regulatory_class=attenuator
contig_1	Pyrodigal	gene	2357798	2358601	.	-	.	ID=GCA000560365_02319_gene;locus_tag=GCA000560365_02319;gene=truA
contig_1	Pyrodigal	CDS	2357798	2358601	.	-	0	ID=GCA000560365_02319;Name=tRNA pseudouridine(38-40) synthase TruA;locus_tag=GCA000560365_02319;product=tRNA pseudouridine(38-40) synthase TruA;Dbxref=GO:0001522,GO:0003723,GO:0009451,GO:0009982,GO:0031119,GO:0160147;gene=truA;Parent=GCA000560365_02319_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0101,COG:J,KEGG:K06173,RefSeq:WP_001221860.1,SO:0001217,UniParc:UPI0000054B89,UniRef:UniRef100_Q2FW37,UniRef:UniRef50_Q2FW37,UniRef:UniRef90_Q2FW37;ec_number=5.4.99.12
contig_1	Pyrodigal	gene	2358606	2359412	.	-	.	ID=GCA000560365_02320_gene;locus_tag=GCA000560365_02320;gene=ecfT
contig_1	Pyrodigal	CDS	2358606	2359412	.	-	0	ID=GCA000560365_02320;Name=Energy-coupling factor transporter transmembrane protein EcfT;locus_tag=GCA000560365_02320;product=Energy-coupling factor transporter transmembrane protein EcfT;Dbxref=GO:0005886,GO:0022857;gene=ecfT;Parent=GCA000560365_02320_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0619,COG:H,KEGG:K16785,RefSeq:WP_000791620.1,SO:0001217,UniParc:UPI0000054B94,UniRef:UniRef100_D3ERJ1,UniRef:UniRef50_D3ERJ1,UniRef:UniRef90_D3ERJ1
contig_1	Pyrodigal	gene	2359402	2360262	.	-	.	ID=GCA000560365_02321_gene;locus_tag=GCA000560365_02321;gene=ecfA2
contig_1	Pyrodigal	CDS	2359402	2360262	.	-	0	ID=GCA000560365_02321;Name=energy-coupling factor transporter ATPase;locus_tag=GCA000560365_02321;product=energy-coupling factor transporter ATPase;Dbxref=GO:0005524,GO:0016887,GO:0042626,GO:0043190;gene=ecfA2;Parent=GCA000560365_02321_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1122,COG:PR,RefSeq:WP_000155386.1,SO:0001217,UniParc:UPI0000054B9F,UniRef:UniRef100_Q2FW35,UniRef:UniRef50_Q2FW35,UniRef:UniRef90_Q2FW35;ec_number=3.6.3.-
contig_1	Pyrodigal	gene	2360259	2361068	.	-	.	ID=GCA000560365_02322_gene;locus_tag=GCA000560365_02322;gene=ecfA1
contig_1	Pyrodigal	CDS	2360259	2361068	.	-	0	ID=GCA000560365_02322;Name=energy-coupling factor transporter ATPase;locus_tag=GCA000560365_02322;product=energy-coupling factor transporter ATPase;Dbxref=GO:0005524,GO:0006810,GO:0009898,GO:0016887,GO:0042626,GO:0043190;gene=ecfA1;Parent=GCA000560365_02322_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1122,COG:PR,RefSeq:WP_000389662.1,SO:0001217,UniParc:UPI00004B5C97,UniRef:UniRef100_Q2FW34,UniRef:UniRef50_Q2YYM4,UniRef:UniRef90_Q2YYM4;ec_number=7.-.-.-
contig_1	Infernal	gene	2360375	2360440	.	+	.	ID=GCA000560365_02323_gene;locus_tag=GCA000560365_02323;gene=sau-31
contig_1	Infernal	ncRNA	2360375	2360440	6.6e-17	+	.	ID=GCA000560365_02323;Name=Staphylococcus sRNA sau-31;locus_tag=GCA000560365_02323;product=Staphylococcus sRNA sau-31;Dbxref=RFAM:RF02389;Parent=GCA000560365_02323_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02389
contig_1	Infernal	gene	2361417	2361480	.	-	.	ID=GCA000560365_02324_gene;locus_tag=GCA000560365_02324;gene=sau-30
contig_1	Infernal	ncRNA	2361417	2361480	1.2e-14	-	.	ID=GCA000560365_02324;Name=Staphylococcus sRNA sau-30;locus_tag=GCA000560365_02324;product=Staphylococcus sRNA sau-30;Dbxref=RFAM:RF02388;Parent=GCA000560365_02324_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02388
contig_1	Pyrodigal	gene	2361606	2361974	.	-	.	ID=GCA000560365_02325_gene;locus_tag=GCA000560365_02325;gene=rplQ
contig_1	Pyrodigal	CDS	2361606	2361974	.	-	0	ID=GCA000560365_02325;Name=50S ribosomal protein L17;locus_tag=GCA000560365_02325;product=50S ribosomal protein L17;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0022625;gene=rplQ;Parent=GCA000560365_02325_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0203,COG:J,RefSeq:WP_000542274.1,SO:0001217,UniParc:UPI0000054BB3,UniRef:UniRef100_Q2FW33,UniRef:UniRef50_P20277,UniRef:UniRef90_Q2FW33
contig_1	Pyrodigal	gene	2361991	2362935	.	-	.	ID=GCA000560365_02326_gene;locus_tag=GCA000560365_02326;gene=rpoA
contig_1	Pyrodigal	CDS	2361991	2362935	.	-	0	ID=GCA000560365_02326;Name=DNA-directed RNA polymerase subunit alpha;locus_tag=GCA000560365_02326;product=DNA-directed RNA polymerase subunit alpha;Dbxref=GO:0000428,GO:0001054,GO:0001055,GO:0001056,GO:0001057,GO:0001058,GO:0001066,GO:0003677,GO:0003899,GO:0005737,GO:0006351,GO:0046983;gene=rpoA;Parent=GCA000560365_02326_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0202,COG:K,RefSeq:WP_000569649.1,SO:0001217,UniParc:UPI0000054BBD,UniRef:UniRef100_Q2FW32,UniRef:UniRef50_Q2FW32,UniRef:UniRef90_Q2FW32;ec_number=2.7.7.6
contig_1	Pyrodigal	gene	2363010	2363399	.	-	.	ID=GCA000560365_02327_gene;locus_tag=GCA000560365_02327;gene=rpsK
contig_1	Pyrodigal	CDS	2363010	2363399	.	-	0	ID=GCA000560365_02327;Name=30S ribosomal protein S11;locus_tag=GCA000560365_02327;product=30S ribosomal protein S11;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:1990904;gene=rpsK;Parent=GCA000560365_02327_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0100,COG:J,KEGG:K02948,RefSeq:WP_000101625.1,SO:0001217,UniParc:UPI0000048025,UniRef:UniRef100_Q2FW31,UniRef:UniRef50_Q6N4V6,UniRef:UniRef90_B9E9L6
contig_1	Pyrodigal	gene	2363423	2363788	.	-	.	ID=GCA000560365_02328_gene;locus_tag=GCA000560365_02328;gene=rpsM
contig_1	Pyrodigal	CDS	2363423	2363788	.	-	0	ID=GCA000560365_02328;Name=30S ribosomal protein S13;locus_tag=GCA000560365_02328;product=30S ribosomal protein S13;Dbxref=GO:0000049,GO:0003723,GO:0003735,GO:0005829,GO:0005840,GO:0006412,GO:0015935,GO:0019843;gene=rpsM;Parent=GCA000560365_02328_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0099,COG:J,KEGG:K02952,RefSeq:WP_000090796.1,SO:0001217,UniParc:UPI0000048027,UniRef:UniRef100_Q2FW30,UniRef:UniRef50_P20282,UniRef:UniRef90_Q2FW30
contig_1	Pyrodigal	gene	2363811	2363924	.	-	.	ID=GCA000560365_02329_gene;locus_tag=GCA000560365_02329;gene=rpmJ
contig_1	Pyrodigal	CDS	2363811	2363924	.	-	0	ID=GCA000560365_02329;Name=50S ribosomal protein L36;locus_tag=GCA000560365_02329;product=50S ribosomal protein L36;Dbxref=GO:0003735,GO:0005737,GO:0005840,GO:0006412,GO:1990904;gene=rpmJ;Parent=GCA000560365_02329_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0257,COG:J,KEGG:K02919,RefSeq:WP_000868342.1,SO:0001217,UniParc:UPI0000054BDA,UniRef:UniRef100_Q2FW29,UniRef:UniRef50_P07841,UniRef:UniRef90_P07841
contig_1	Pyrodigal	gene	2363956	2364174	.	-	.	ID=GCA000560365_02330_gene;locus_tag=GCA000560365_02330;gene=infA
contig_1	Pyrodigal	CDS	2363956	2364174	.	-	0	ID=GCA000560365_02330;Name=translation initiation factor IF-1;locus_tag=GCA000560365_02330;product=translation initiation factor IF-1;Dbxref=GO:0003743,GO:0005829,GO:0006413,GO:0019843,GO:0043022;gene=infA;Parent=GCA000560365_02330_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0361,COG:J,KEGG:K02518,RefSeq:WP_001118443.1,SO:0001217,UniParc:UPI0000054BE5,UniRef:UniRef100_Q2FW28,UniRef:UniRef50_P0A3K4,UniRef:UniRef90_Q2FW28
contig_1	Pyrodigal	gene	2364367	2365014	.	-	.	ID=GCA000560365_02331_gene;locus_tag=GCA000560365_02331;gene=adk
contig_1	Pyrodigal	CDS	2364367	2365014	.	-	0	ID=GCA000560365_02331;Name=adenylate kinase;locus_tag=GCA000560365_02331;product=adenylate kinase;Dbxref=GO:0004017,GO:0005524,GO:0005737,GO:0006139,GO:0008270,GO:0016776,GO:0019205,GO:0044209;gene=adk;Parent=GCA000560365_02331_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0563,COG:F,RefSeq:WP_001021468.1,SO:0001217,UniParc:UPI000012DBE8,UniRef:UniRef100_Q5HDX9,UniRef:UniRef50_B2A4G2,UniRef:UniRef90_Q5HM20;ec_number=2.7.4.3
contig_1	Pyrodigal	gene	2365031	2366323	.	-	.	ID=GCA000560365_02332_gene;locus_tag=GCA000560365_02332;gene=secY
contig_1	Pyrodigal	CDS	2365031	2366323	.	-	0	ID=GCA000560365_02332;Name=preprotein translocase subunit SecY;locus_tag=GCA000560365_02332;product=preprotein translocase subunit SecY;Dbxref=GO:0005886,GO:0006605,GO:0015031,GO:0016020,GO:0043952,GO:0065002;gene=secY;Parent=GCA000560365_02332_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0201,COG:U,RefSeq:WP_000616784.1,SO:0001217,UniParc:UPI0000054BFA,UniRef:UniRef100_O08387,UniRef:UniRef50_O08387,UniRef:UniRef90_O08387
contig_1	Pyrodigal	gene	2366323	2366763	.	-	.	ID=GCA000560365_02333_gene;locus_tag=GCA000560365_02333;gene=rplO
contig_1	Pyrodigal	CDS	2366323	2366763	.	-	0	ID=GCA000560365_02333;Name=50S ribosomal protein L15;locus_tag=GCA000560365_02333;product=50S ribosomal protein L15;Dbxref=GO:0003735,GO:0006412,GO:0015934,GO:0019843,GO:0022625;gene=rplO;Parent=GCA000560365_02333_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0200,COG:J,KEGG:K02876,RefSeq:WP_000766074.1,SO:0001217,UniParc:UPI0000054C04,UniRef:UniRef100_P0A0F8,UniRef:UniRef50_Q5M2D2,UniRef:UniRef90_P0A0F8
contig_1	Pyrodigal	gene	2366780	2366959	.	-	.	ID=GCA000560365_02334_gene;locus_tag=GCA000560365_02334;gene=rpmD
contig_1	Pyrodigal	CDS	2366780	2366959	.	-	0	ID=GCA000560365_02334;Name=50S ribosomal protein L30;locus_tag=GCA000560365_02334;product=50S ribosomal protein L30;Dbxref=GO:0003735,GO:0006412,GO:0015934,GO:0022625;gene=rpmD;Parent=GCA000560365_02334_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1841,COG:J,RefSeq:WP_001096577.1,SO:0001217,UniParc:UPI0000054C0F,UniRef:UniRef100_P0A0G2,UniRef:UniRef50_P0A0G2,UniRef:UniRef90_P0A0G2
contig_1	Pyrodigal	gene	2366976	2367476	.	-	.	ID=GCA000560365_02335_gene;locus_tag=GCA000560365_02335;gene=rpsE
contig_1	Pyrodigal	CDS	2366976	2367476	.	-	0	ID=GCA000560365_02335;Name=30S ribosomal protein S5;locus_tag=GCA000560365_02335;product=30S ribosomal protein S5;Dbxref=GO:0003735,GO:0005737,GO:0006412,GO:0015935,GO:0019843;gene=rpsE;Parent=GCA000560365_02335_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0098,COG:J,KEGG:K02988,RefSeq:WP_000113851.1,SO:0001217,UniParc:UPI0000048021,UniRef:UniRef100_Q2FW23,UniRef:UniRef50_P21467,UniRef:UniRef90_B9DM30
contig_1	Pyrodigal	gene	2367497	2367856	.	-	.	ID=GCA000560365_02336_gene;locus_tag=GCA000560365_02336;gene=rplR
contig_1	Pyrodigal	CDS	2367497	2367856	.	-	0	ID=GCA000560365_02336;Name=50S ribosomal protein L18;locus_tag=GCA000560365_02336;product=50S ribosomal protein L18;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0008097,GO:0022625;gene=rplR;Parent=GCA000560365_02336_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0256,COG:J,RefSeq:WP_000623881.1,SO:0001217,UniParc:UPI0000054C23,UniRef:UniRef100_Q2FW22,UniRef:UniRef50_Q2FW22,UniRef:UniRef90_Q2FW22
contig_1	Pyrodigal	gene	2367887	2368423	.	-	.	ID=GCA000560365_02337_gene;locus_tag=GCA000560365_02337;gene=rplF
contig_1	Pyrodigal	CDS	2367887	2368423	.	-	0	ID=GCA000560365_02337;Name=50S ribosomal protein L6;locus_tag=GCA000560365_02337;product=50S ribosomal protein L6;Dbxref=GO:0002181,GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:0022625;gene=rplF;Parent=GCA000560365_02337_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0097,COG:J,RefSeq:WP_000091975.1,SO:0001217,UniParc:UPI0000054C2C,UniRef:UniRef100_Q2FW21,UniRef:UniRef50_B1XJJ3,UniRef:UniRef90_Q2FW21
contig_1	Pyrodigal	gene	2368448	2368846	.	-	.	ID=GCA000560365_02338_gene;locus_tag=GCA000560365_02338;gene=rpsH
contig_1	Pyrodigal	CDS	2368448	2368846	.	-	0	ID=GCA000560365_02338;Name=30S ribosomal protein S8;locus_tag=GCA000560365_02338;product=30S ribosomal protein S8;Dbxref=GO:0003735,GO:0005737,GO:0005840,GO:0006412,GO:0019843,GO:1990904;gene=rpsH;Parent=GCA000560365_02338_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0096,COG:J,RefSeq:WP_000178881.1,SO:0001217,UniParc:UPI000004801B,UniRef:UniRef100_Q2FW20,UniRef:UniRef50_P12879,UniRef:UniRef90_B9DM33
contig_1	Pyrodigal	gene	2368878	2369063	.	-	.	ID=GCA000560365_02339_gene;locus_tag=GCA000560365_02339;gene=rpsZ
contig_1	Pyrodigal	CDS	2368878	2369063	.	-	0	ID=GCA000560365_02339;Name=type Z 30S ribosomal protein S14;locus_tag=GCA000560365_02339;product=type Z 30S ribosomal protein S14;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0008270,GO:0015935,GO:0019843;gene=rpsZ;Parent=GCA000560365_02339_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0199,COG:J,KEGG:K02954,RefSeq:WP_001140799.1,SO:0001217,UniParc:UPI0000048028,UniRef:UniRef100_Q2FW19,UniRef:UniRef50_P12878,UniRef:UniRef90_Q2FW19
contig_1	Pyrodigal	gene	2369086	2369625	.	-	.	ID=GCA000560365_02340_gene;locus_tag=GCA000560365_02340;gene=rplE
contig_1	Pyrodigal	CDS	2369086	2369625	.	-	0	ID=GCA000560365_02340;Name=50S ribosomal protein L5;locus_tag=GCA000560365_02340;product=50S ribosomal protein L5;Dbxref=GO:0000049,GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:1990904;gene=rplE;Parent=GCA000560365_02340_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0094,COG:J,KEGG:K02931,RefSeq:WP_001080824.1,SO:0001217,UniParc:UPI00000D76D0,UniRef:UniRef100_Q2FW18,UniRef:UniRef50_Q6N4U5,UniRef:UniRef90_Q2FW18
contig_1	Pyrodigal	gene	2369652	2369969	.	-	.	ID=GCA000560365_02341_gene;locus_tag=GCA000560365_02341;gene=rplX
contig_1	Pyrodigal	CDS	2369652	2369969	.	-	0	ID=GCA000560365_02341;Name=50S ribosomal protein L24;locus_tag=GCA000560365_02341;product=50S ribosomal protein L24;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:1990904;gene=rplX;Parent=GCA000560365_02341_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0198,COG:J,RefSeq:WP_000547687.1,SO:0001217,UniParc:UPI0000054C5E,UniRef:UniRef100_Q2FW17,UniRef:UniRef50_P0CI78,UniRef:UniRef90_Q49ZF7
contig_1	Pyrodigal	gene	2370005	2370373	.	-	.	ID=GCA000560365_02342_gene;locus_tag=GCA000560365_02342;gene=rplN
contig_1	Pyrodigal	CDS	2370005	2370373	.	-	0	ID=GCA000560365_02342;Name=50S ribosomal protein L14;locus_tag=GCA000560365_02342;product=50S ribosomal protein L14;Dbxref=GO:0003735,GO:0006412,GO:0015934,GO:0022625,GO:0070180;gene=rplN;Parent=GCA000560365_02342_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0093,COG:J,RefSeq:WP_000615921.1,SO:0001217,UniParc:UPI0000054C69,UniRef:UniRef100_Q2FW16,UniRef:UniRef50_B2LMN0,UniRef:UniRef90_Q927L7
contig_1	Pyrodigal	gene	2370405	2370668	.	-	.	ID=GCA000560365_02343_gene;locus_tag=GCA000560365_02343;gene=rpsQ
contig_1	Pyrodigal	CDS	2370405	2370668	.	-	0	ID=GCA000560365_02343;Name=30S ribosomal protein S17;locus_tag=GCA000560365_02343;product=30S ribosomal protein S17;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:0022627;gene=rpsQ;Parent=GCA000560365_02343_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0186,COG:J,RefSeq:WP_000004086.1,SO:0001217,UniParc:UPI000004801D,UniRef:UniRef100_Q2FW15,UniRef:UniRef50_P12874,UniRef:UniRef90_Q2FW15
contig_1	Pyrodigal	gene	2370692	2370901	.	-	.	ID=GCA000560365_02344_gene;locus_tag=GCA000560365_02344;gene=rpmC
contig_1	Pyrodigal	CDS	2370692	2370901	.	-	0	ID=GCA000560365_02344;Name=50S ribosomal protein L29;locus_tag=GCA000560365_02344;product=50S ribosomal protein L29;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0022625;gene=rpmC;Parent=GCA000560365_02344_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0255,COG:J,RefSeq:WP_000644737.1,SO:0001217,UniParc:UPI0000133E90,UniRef:UniRef100_Q2FW14,UniRef:UniRef50_Q2FW14,UniRef:UniRef90_Q2FW14
contig_1	Pyrodigal	gene	2370891	2371325	.	-	.	ID=GCA000560365_02345_gene;locus_tag=GCA000560365_02345;gene=rplP
contig_1	Pyrodigal	CDS	2370891	2371325	.	-	0	ID=GCA000560365_02345;Name=50S ribosomal protein L16;locus_tag=GCA000560365_02345;product=50S ribosomal protein L16;Dbxref=GO:0000049,GO:0003735,GO:0006412,GO:0019843,GO:0022625;gene=rplP;Parent=GCA000560365_02345_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0197,COG:J,RefSeq:WP_000926310.1,SO:0001217,UniParc:UPI00000D76A9,UniRef:UniRef100_Q2FW13,UniRef:UniRef50_Q2FW13,UniRef:UniRef90_Q2FW13
contig_1	Pyrodigal	gene	2371328	2371981	.	-	.	ID=GCA000560365_02346_gene;locus_tag=GCA000560365_02346;gene=rpsC
contig_1	Pyrodigal	CDS	2371328	2371981	.	-	0	ID=GCA000560365_02346;Name=30S ribosomal protein S3;locus_tag=GCA000560365_02346;product=30S ribosomal protein S3;Dbxref=GO:0003729,GO:0003735,GO:0006412,GO:0019843,GO:0022627;gene=rpsC;Parent=GCA000560365_02346_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0092,COG:J,KEGG:K02982,RefSeq:WP_000529877.1,SO:0001217,UniParc:UPI0000134FAF,UniRef:UniRef100_Q2FW12,UniRef:UniRef50_P23309,UniRef:UniRef90_Q2FW12
contig_1	Pyrodigal	gene	2372005	2372358	.	-	.	ID=GCA000560365_02347_gene;locus_tag=GCA000560365_02347;gene=rplV
contig_1	Pyrodigal	CDS	2372005	2372358	.	-	0	ID=GCA000560365_02347;Name=50S ribosomal protein L22;locus_tag=GCA000560365_02347;product=50S ribosomal protein L22;Dbxref=GO:0003735,GO:0006412,GO:0015934,GO:0019843,GO:0022625;gene=rplV;Parent=GCA000560365_02347_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0091,COG:J,KEGG:K02890,RefSeq:WP_000387527.1,SO:0001217,UniParc:UPI0000054ADA,UniRef:UniRef100_Q2FW11,UniRef:UniRef50_Q2FW11,UniRef:UniRef90_Q2FW11
contig_1	Pyrodigal	gene	2372387	2372665	.	-	.	ID=GCA000560365_02348_gene;locus_tag=GCA000560365_02348;gene=rpsS
contig_1	Pyrodigal	CDS	2372387	2372665	.	-	0	ID=GCA000560365_02348;Name=30S ribosomal protein S19;locus_tag=GCA000560365_02348;product=30S ribosomal protein S19;Dbxref=GO:0000028,GO:0003735,GO:0005737,GO:0006412,GO:0015935,GO:0019843;gene=rpsS;Parent=GCA000560365_02348_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0185,COG:J,RefSeq:WP_000124353.1,SO:0001217,UniParc:UPI000004802B,UniRef:UniRef100_Q2FW10,UniRef:UniRef50_Q49ZG4,UniRef:UniRef90_Q49ZG4
contig_1	Pyrodigal	gene	2372732	2373565	.	-	.	ID=GCA000560365_02349_gene;locus_tag=GCA000560365_02349;gene=rplB
contig_1	Pyrodigal	CDS	2372732	2373565	.	-	0	ID=GCA000560365_02349;Name=50S ribosomal protein L2;locus_tag=GCA000560365_02349;product=50S ribosomal protein L2;Dbxref=GO:0002181,GO:0003723,GO:0003735,GO:0006412,GO:0015934,GO:0016740,GO:0019843;gene=rplB;Parent=GCA000560365_02349_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0090,COG:J,KEGG:K02886,RefSeq:WP_000985472.1,SO:0001217,UniParc:UPI00000522A9,UniRef:UniRef100_P60430,UniRef:UniRef50_A1BJ31,UniRef:UniRef90_P60430
contig_1	Pyrodigal	gene	2373598	2373873	.	-	.	ID=GCA000560365_02350_gene;locus_tag=GCA000560365_02350;gene=rplW
contig_1	Pyrodigal	CDS	2373598	2373873	.	-	0	ID=GCA000560365_02350;Name=50S ribosomal protein L23;locus_tag=GCA000560365_02350;product=50S ribosomal protein L23;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:1990904;gene=rplW;Parent=GCA000560365_02350_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0089,COG:J,RefSeq:WP_000388082.1,SO:0001217,UniParc:UPI00000549A8,UniRef:UniRef100_Q2FW08,UniRef:UniRef50_A0QSD3,UniRef:UniRef90_B9DM17
contig_1	Pyrodigal	gene	2373873	2374496	.	-	.	ID=GCA000560365_02351_gene;locus_tag=GCA000560365_02351;gene=rplD
contig_1	Pyrodigal	CDS	2373873	2374496	.	-	0	ID=GCA000560365_02351;Name=50S ribosomal protein L4;locus_tag=GCA000560365_02351;product=50S ribosomal protein L4;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:0022625,GO:1990904;gene=rplD;Parent=GCA000560365_02351_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0088,COG:J,RefSeq:WP_000024827.1,SO:0001217,UniParc:UPI00000545D9,UniRef:UniRef100_Q2FW07,UniRef:UniRef50_P42921,UniRef:UniRef90_Q49ZG7
contig_1	Pyrodigal	gene	2374523	2375185	.	-	.	ID=GCA000560365_02352_gene;locus_tag=GCA000560365_02352;gene=rplC
contig_1	Pyrodigal	CDS	2374523	2375185	.	-	0	ID=GCA000560365_02352;Name=50S ribosomal protein L3 RplC;locus_tag=GCA000560365_02352;product=50S ribosomal protein L3 RplC;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:0022625;gene=rplC;Parent=GCA000560365_02352_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0087,COG:J,KEGG:K02906,RefSeq:WP_000160212.1,SO:0001217,UniParc:UPI00000D76AA,UniRef:UniRef100_Q2FW06,UniRef:UniRef50_Q2FW06,UniRef:UniRef90_Q2FW06
contig_1	Pyrodigal	gene	2375213	2375521	.	-	.	ID=GCA000560365_02353_gene;locus_tag=GCA000560365_02353;gene=rpsJ_Y58D
contig_1	Pyrodigal	CDS	2375213	2375521	.	-	0	ID=GCA000560365_02353;Name=30S ribosomal protein S10;locus_tag=GCA000560365_02353;product=30S ribosomal protein S10;Dbxref=GO:0000049,GO:0003723,GO:0003735,GO:0005840,GO:0006412,GO:1990904;gene=rpsJ_Y58D;Parent=GCA000560365_02353_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0051,COG:J,RefSeq:WP_001118667.1,SO:0001217,UniParc:UPI0000048024,UniRef:UniRef100_Q5HLZ8,UniRef:UniRef50_P0A7R5,UniRef:UniRef90_B9E9J0
contig_1	Pyrodigal	gene	2375878	2376267	.	+	.	ID=GCA000560365_02354_gene;locus_tag=GCA000560365_02354
contig_1	Pyrodigal	CDS	2375878	2376267	.	+	0	ID=GCA000560365_02354;Name=Integral membrane protein;locus_tag=GCA000560365_02354;product=Integral membrane protein;Parent=GCA000560365_02354_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000788443.1,SO:0001217,UniParc:UPI00000CAA87,UniRef:UniRef100_Q2FW05,UniRef:UniRef50_Q2FW05,UniRef:UniRef90_Q2FW05
contig_1	Pyrodigal	gene	2376459	2377793	.	-	.	ID=GCA000560365_02355_gene;locus_tag=GCA000560365_02355;gene=nCS2
contig_1	Pyrodigal	CDS	2376459	2377793	.	-	0	ID=GCA000560365_02355;Name=NCS2 family permease;locus_tag=GCA000560365_02355;product=NCS2 family permease;gene=nCS2;Parent=GCA000560365_02355_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2252,COG:F,KEGG:K06901,RefSeq:WP_000800700.1,SO:0001217,UniParc:UPI00000D7655,UniRef:UniRef100_Q2FW04,UniRef:UniRef50_O34987,UniRef:UniRef90_Q2FW04
contig_1	Pyrodigal	gene	2377906	2380041	.	-	.	ID=GCA000560365_02356_gene;locus_tag=GCA000560365_02356;gene=topB
contig_1	Pyrodigal	CDS	2377906	2380041	.	-	0	ID=GCA000560365_02356;Name=DNA topoisomerase 3;locus_tag=GCA000560365_02356;product=DNA topoisomerase 3;Dbxref=GO:0000287,GO:0003677,GO:0003917,GO:0006265,GO:0006281,GO:0006310,GO:0043597;gene=topB;Parent=GCA000560365_02356_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0551,COG:L,RefSeq:WP_000838479.1,SO:0001217,UniParc:UPI00000D77D4,UniRef:UniRef100_Q2FEN5,UniRef:UniRef50_P0C2W6,UniRef:UniRef90_P0C2W6;ec_number=5.6.2.1
contig_1	Pyrodigal	gene	2380228	2381115	.	+	.	ID=GCA000560365_02357_gene;locus_tag=GCA000560365_02357
contig_1	Pyrodigal	CDS	2380228	2381115	.	+	0	ID=GCA000560365_02357;Name=N-acetyltransferase domain-containing protein;locus_tag=GCA000560365_02357;product=N-acetyltransferase domain-containing protein;Parent=GCA000560365_02357_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000029536.1,SO:0001217,UniParc:UPI00000D9F5F,UniRef:UniRef100_Q2FW01,UniRef:UniRef50_Q2FW01,UniRef:UniRef90_Q2FW01
contig_1	Pyrodigal	gene	2381296	2382159	.	+	.	ID=GCA000560365_02358_gene;locus_tag=GCA000560365_02358;gene=glcU
contig_1	Pyrodigal	CDS	2381296	2382159	.	+	0	ID=GCA000560365_02358;Name=putative glucose uptake protein GlcU;locus_tag=GCA000560365_02358;product=putative glucose uptake protein GlcU;Dbxref=GO:0005886,GO:0015144;gene=glcU;Parent=GCA000560365_02358_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4975,COG:G,KEGG:K05340,RefSeq:WP_001159898.1,SO:0001217,UniParc:UPI00000D76E6,UniRef:UniRef100_Q5HDV2,UniRef:UniRef50_O07881,UniRef:UniRef90_Q6GEH7
contig_1	Pyrodigal	gene	2382578	2383486	.	-	.	ID=GCA000560365_02359_gene;locus_tag=GCA000560365_02359;gene=yfdV
contig_1	Pyrodigal	CDS	2382578	2383486	.	-	0	ID=GCA000560365_02359;Name=AEC family transporter;locus_tag=GCA000560365_02359;product=AEC family transporter;gene=yfdV;Parent=GCA000560365_02359_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0679,COG:R,RefSeq:WP_000139189.1,SO:0001217,UniParc:UPI000169854A,UniRef:UniRef100_A0A0E8HSA0,UniRef:UniRef50_Q2FVZ8,UniRef:UniRef90_Q2FVZ8
contig_1	Pyrodigal	gene	2383619	2383783	.	+	.	ID=GCA000560365_02360_gene;locus_tag=GCA000560365_02360
contig_1	Pyrodigal	CDS	2383619	2383783	.	+	0	ID=GCA000560365_02360;Name=SE1832 family protein;locus_tag=GCA000560365_02360;product=SE1832 family protein;Parent=GCA000560365_02360_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000051206.1,SO:0001217,UniParc:UPI00000546B7,UniRef:UniRef100_Q2FVZ7,UniRef:UniRef50_Q2FVZ7,UniRef:UniRef90_Q2FVZ7
contig_1	Pyrodigal	gene	2384028	2384345	.	+	.	ID=GCA000560365_02361_gene;locus_tag=GCA000560365_02361;gene=mspA
contig_1	Pyrodigal	CDS	2384028	2384345	.	+	0	ID=GCA000560365_02361;Name=membrane stabilizing protein MspA;locus_tag=GCA000560365_02361;product=membrane stabilizing protein MspA;Dbxref=GO:0016020;gene=mspA;Parent=GCA000560365_02361_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001161085.1,SO:0001217,UniParc:UPI00000D76DA,UniRef:UniRef100_Q2FVZ6,UniRef:UniRef50_Q2FVZ6,UniRef:UniRef90_Q2FVZ6
contig_1	Pyrodigal	gene	2384532	2387699	.	-	.	ID=GCA000560365_02362_gene;locus_tag=GCA000560365_02362;gene=acrB
contig_1	Pyrodigal	CDS	2384532	2387699	.	-	0	ID=GCA000560365_02362;Name=multidrug efflux RND transporter permease subunit AcrB;locus_tag=GCA000560365_02362;product=multidrug efflux RND transporter permease subunit AcrB;gene=acrB;Parent=GCA000560365_02362_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0841,COG:V,RefSeq:WP_000592303.1,SO:0001217,UniParc:UPI00000B1611,UniRef:UniRef100_Q2FVZ5,UniRef:UniRef50_Q2FVZ5,UniRef:UniRef90_Q2FVZ5
contig_1	Pyrodigal	gene	2387816	2389081	.	-	.	ID=GCA000560365_02363_gene;locus_tag=GCA000560365_02363;gene=femX
contig_1	Pyrodigal	CDS	2387816	2389081	.	-	0	ID=GCA000560365_02363;Name=lipid II:glycine glycyltransferase;locus_tag=GCA000560365_02363;product=lipid II:glycine glycyltransferase;Dbxref=GO:0005737,GO:0008360,GO:0009252,GO:0016755,GO:0046677,GO:0071555;gene=femX;Parent=GCA000560365_02363_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000413865,COG:COG2348,COG:M,KEGG:K11693,RefSeq:WP_000413865.1,SO:0001217,UniParc:UPI00000546DE,UniRef:UniRef100_Q2FVZ4,UniRef:UniRef50_Q2FVZ4,UniRef:UniRef90_Q2FVZ4;ec_number=2.3.2.16
contig_1	Pyrodigal	gene	2389470	2389721	.	+	.	ID=GCA000560365_02364_gene;locus_tag=GCA000560365_02364
contig_1	Pyrodigal	CDS	2389470	2389721	.	+	0	ID=GCA000560365_02364;Name=hypothetical protein;locus_tag=GCA000560365_02364;product=hypothetical protein;Parent=GCA000560365_02364_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001549681.1,SO:0001217,UniParc:UPI00000CA9A1,UniRef:UniRef100_Q2FVZ3,UniRef:UniRef50_Q2FVZ3,UniRef:UniRef90_Q2FVZ3
contig_1	Pyrodigal	gene	2389713	2390477	.	-	.	ID=GCA000560365_02365_gene;locus_tag=GCA000560365_02365
contig_1	Pyrodigal	CDS	2389713	2390477	.	-	0	ID=GCA000560365_02365;Name=Glyoxalase-like domain-containing protein;locus_tag=GCA000560365_02365;product=Glyoxalase-like domain-containing protein;Parent=GCA000560365_02365_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000600967.1,SO:0001217,UniParc:UPI00000546E8,UniRef:UniRef100_Q2FVZ2,UniRef:UniRef50_Q2FVZ2,UniRef:UniRef90_Q2FVZ2
contig_1	Pyrodigal	gene	2390639	2391079	.	+	.	ID=GCA000560365_02366_gene;locus_tag=GCA000560365_02366;gene=marR
contig_1	Pyrodigal	CDS	2390639	2391079	.	+	0	ID=GCA000560365_02366;Name=putative HTH-type transcriptional regulator SA2060;locus_tag=GCA000560365_02366;product=putative HTH-type transcriptional regulator SA2060;Dbxref=GO:0003677,GO:0003700,GO:0006950;gene=marR;Parent=GCA000560365_02366_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1846,COG:K,RefSeq:WP_000951059.1,SO:0001217,UniParc:UPI0000696CC5,UniRef:UniRef100_A0A5A8VS58,UniRef:UniRef50_Q6GEG9,UniRef:UniRef90_Q6GEG9
contig_1	Pyrodigal	gene	2391072	2392283	.	+	.	ID=GCA000560365_02367_gene;locus_tag=GCA000560365_02367;gene=araJ
contig_1	Pyrodigal	CDS	2391072	2392283	.	+	0	ID=GCA000560365_02367;Name=Major facilitator superfamily (MFS) profile domain-containing protein;locus_tag=GCA000560365_02367;product=Major facilitator superfamily (MFS) profile domain-containing protein;gene=araJ;Parent=GCA000560365_02367_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2814,COG:G,RefSeq:WP_000184419.1,SO:0001217,UniParc:UPI00000546F4,UniRef:UniRef100_Q2FVZ0,UniRef:UniRef50_Q2FVZ0,UniRef:UniRef90_Q2FVZ0
contig_1	Pyrodigal	gene	2392385	2392735	.	-	.	ID=GCA000560365_02368_gene;locus_tag=GCA000560365_02368;gene=sarV
contig_1	Pyrodigal	CDS	2392385	2392735	.	-	0	ID=GCA000560365_02368;Name=HTH-type transcriptional regulator SarV;locus_tag=GCA000560365_02368;product=HTH-type transcriptional regulator SarV;Dbxref=GO:0003677,GO:0005737,GO:0006355;gene=sarV;Parent=GCA000560365_02368_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000066900,COG:COG1846,COG:K,RefSeq:WP_000066900.1,SO:0001217,UniParc:UPI0000054708,UniRef:UniRef100_Q2FVY9,UniRef:UniRef50_Q2FVY9,UniRef:UniRef90_Q2FVY9
contig_1	Infernal	gene	2392988	2393260	.	+	.	ID=GCA000560365_02369_gene;locus_tag=GCA000560365_02369;gene=S35
contig_1	Infernal	ncRNA	2392988	2393260	1e-16	+	.	ID=GCA000560365_02369;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000560365_02369;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000560365_02369_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	2393426	2394448	.	-	.	ID=GCA000560365_02370_gene;locus_tag=GCA000560365_02370;gene=moaA
contig_1	Pyrodigal	CDS	2393426	2394448	.	-	0	ID=GCA000560365_02370;Name=GTP 3'%2C8-cyclase MoaA;locus_tag=GCA000560365_02370;product=GTP 3'%2C8-cyclase MoaA;Dbxref=GO:0005525,GO:0006777,GO:0046872,GO:0051539,GO:0061798,GO:0061799,GO:1904047;gene=moaA;Parent=GCA000560365_02370_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2896,COG:H,RefSeq:WP_000230173.1,SO:0001217,UniParc:UPI0000054728,UniRef:UniRef100_P69848,UniRef:UniRef50_P69848,UniRef:UniRef90_P69848;ec_number=4.1.99.22
contig_1	Pyrodigal	gene	2394468	2395067	.	-	.	ID=GCA000560365_02371_gene;locus_tag=GCA000560365_02371;gene=mobA
contig_1	Pyrodigal	CDS	2394468	2395067	.	-	0	ID=GCA000560365_02371;Name=molybdenum cofactor guanylyltransferase MobA;locus_tag=GCA000560365_02371;product=molybdenum cofactor guanylyltransferase MobA;Dbxref=GO:0005525,GO:0005737,GO:0006777,GO:0046872,GO:0061603;gene=mobA;Parent=GCA000560365_02371_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0746,COG:H,RefSeq:WP_000643988.1,SO:0001217,UniParc:UPI0000054733,UniRef:UniRef100_Q2FVY4,UniRef:UniRef50_Q5HLY0,UniRef:UniRef90_Q2FVY4;ec_number=2.7.7.77
contig_1	Pyrodigal	gene	2395074	2395307	.	-	.	ID=GCA000560365_02372_gene;locus_tag=GCA000560365_02372;gene=moaD
contig_1	Pyrodigal	CDS	2395074	2395307	.	-	0	ID=GCA000560365_02372;Name=molybdopterin converting factor subunit 1;locus_tag=GCA000560365_02372;product=molybdopterin converting factor subunit 1;Dbxref=GO:0000166,GO:0003824,GO:0006777,GO:1990133;gene=moaD;Parent=GCA000560365_02372_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1977,COG:H,RefSeq:WP_000866971.1,SO:0001217,UniParc:UPI000005473D,UniRef:UniRef100_Q7A441,UniRef:UniRef50_Q7A441,UniRef:UniRef90_Q7A441
contig_1	Pyrodigal	gene	2395313	2395759	.	-	.	ID=GCA000560365_02373_gene;locus_tag=GCA000560365_02373;gene=moaE
contig_1	Pyrodigal	CDS	2395313	2395759	.	-	0	ID=GCA000560365_02373;Name=Molybdopterin synthase catalytic subunit;locus_tag=GCA000560365_02373;product=Molybdopterin synthase catalytic subunit;Dbxref=GO:0006777,GO:0030366;gene=moaE;Parent=GCA000560365_02373_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0314,COG:H,KEGG:K03635,RefSeq:WP_000808500.1,SO:0001217,UniParc:UPI0000054752,UniRef:UniRef100_Q5HDT6,UniRef:UniRef50_Q9K8I7,UniRef:UniRef90_P65400;ec_number=2.8.1.12
contig_1	Pyrodigal	gene	2395773	2396258	.	-	.	ID=GCA000560365_02374_gene;locus_tag=GCA000560365_02374;gene=mobB
contig_1	Pyrodigal	CDS	2395773	2396258	.	-	0	ID=GCA000560365_02374;Name=molybdopterin-guanine dinucleotide biosynthesis protein B;locus_tag=GCA000560365_02374;product=molybdopterin-guanine dinucleotide biosynthesis protein B;Dbxref=GO:0003824,GO:0005525,GO:0006777;gene=mobB;Parent=GCA000560365_02374_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1763,COG:H,RefSeq:WP_000602937.1,SO:0001217,UniParc:UPI000005475C,UniRef:UniRef100_Q2FVY1,UniRef:UniRef50_A0A380H3I1,UniRef:UniRef90_A0A0U1MRQ4
contig_1	Pyrodigal	gene	2396255	2397514	.	-	.	ID=GCA000560365_02375_gene;locus_tag=GCA000560365_02375;gene=glp
contig_1	Pyrodigal	CDS	2396255	2397514	.	-	0	ID=GCA000560365_02375;Name=gephyrin-like molybdotransferase Glp;locus_tag=GCA000560365_02375;product=gephyrin-like molybdotransferase Glp;Dbxref=GO:0005829,GO:0006777,GO:0046872,GO:0061599,GO:1990586;gene=glp;Parent=GCA000560365_02375_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0303,COG:H,RefSeq:WP_000259718.1,SO:0001217,UniParc:UPI0000054767,UniRef:UniRef100_Q5HDT4,UniRef:UniRef50_P65407,UniRef:UniRef90_P65407;ec_number=2.10.1.1
contig_1	Pyrodigal	gene	2397577	2398071	.	+	.	ID=GCA000560365_02376_gene;locus_tag=GCA000560365_02376;gene=moaC
contig_1	Pyrodigal	CDS	2397577	2398071	.	+	0	ID=GCA000560365_02376;Name=cyclic pyranopterin monophosphate synthase MoaC;locus_tag=GCA000560365_02376;product=cyclic pyranopterin monophosphate synthase MoaC;Dbxref=GO:0006777,GO:0061799;gene=moaC;Parent=GCA000560365_02376_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0315,COG:H,KEGG:K03637,RefSeq:WP_000134528.1,SO:0001217,UniParc:UPI0000054768,UniRef:UniRef100_Q2FVX9,UniRef:UniRef50_Q2FVX9,UniRef:UniRef90_Q2FVX9;ec_number=4.6.1.17
contig_1	Pyrodigal	gene	2398073	2398579	.	-	.	ID=GCA000560365_02377_gene;locus_tag=GCA000560365_02377;gene=moaB
contig_1	Pyrodigal	CDS	2398073	2398579	.	-	0	ID=GCA000560365_02377;Name=Molybdenum cofactor biosynthesis protein B;locus_tag=GCA000560365_02377;product=Molybdenum cofactor biosynthesis protein B;Dbxref=GO:0005829,GO:0006777;gene=moaB;Parent=GCA000560365_02377_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0521,COG:H,RefSeq:WP_000503817.1,SO:0001217,UniParc:UPI0000696CC6,UniRef:UniRef100_A0A0E8HMR4,UniRef:UniRef50_Q9ZIN3,UniRef:UniRef90_P65406
contig_1	Pyrodigal	gene	2398610	2399614	.	-	.	ID=GCA000560365_02378_gene;locus_tag=GCA000560365_02378;gene=thiF
contig_1	Pyrodigal	CDS	2398610	2399614	.	-	0	ID=GCA000560365_02378;Name=THIF-type NAD/FAD binding fold domain-containing protein;locus_tag=GCA000560365_02378;product=THIF-type NAD/FAD binding fold domain-containing protein;gene=thiF;Parent=GCA000560365_02378_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0476,COG:H,RefSeq:WP_000076929.1,SO:0001217,UniParc:UPI00004B5C9A,UniRef:UniRef100_Q2FVX7,UniRef:UniRef50_A0A380C5E9,UniRef:UniRef90_Q2FVX7
contig_1	Pyrodigal	gene	2399784	2400389	.	-	.	ID=GCA000560365_02379_gene;locus_tag=GCA000560365_02379;gene=modC
contig_1	Pyrodigal	CDS	2399784	2400389	.	-	0	ID=GCA000560365_02379;Name=ATP-binding cassette domain-containing protein;locus_tag=GCA000560365_02379;product=ATP-binding cassette domain-containing protein;gene=modC;Parent=GCA000560365_02379_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4148,COG:P,RefSeq:WP_000913019.1,SO:0001217,UniParc:UPI000005478D,UniRef:UniRef100_Q2FVX6,UniRef:UniRef50_A0A380G6T3,UniRef:UniRef90_A0A390QQI7
contig_1	Pyrodigal	gene	2400390	2401061	.	-	.	ID=GCA000560365_02380_gene;locus_tag=GCA000560365_02380;gene=modB
contig_1	Pyrodigal	CDS	2400390	2401061	.	-	0	ID=GCA000560365_02380;Name=molybdate ABC transporter permease subunit;locus_tag=GCA000560365_02380;product=molybdate ABC transporter permease subunit;Dbxref=GO:0005886,GO:0015412,GO:0015689,GO:0055052;gene=modB;Parent=GCA000560365_02380_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4149,COG:P,RefSeq:WP_001113090.1,SO:0001217,UniParc:UPI0000696CC7,UniRef:UniRef100_A0A0E8HNL7,UniRef:UniRef50_A0AAJ4SFQ7,UniRef:UniRef90_A0A0E8HNL7
contig_1	Pyrodigal	gene	2401075	2401857	.	-	.	ID=GCA000560365_02381_gene;locus_tag=GCA000560365_02381;gene=modA
contig_1	Pyrodigal	CDS	2401075	2401857	.	-	0	ID=GCA000560365_02381;Name=molybdate ABC transporter substrate-binding protein;locus_tag=GCA000560365_02381;product=molybdate ABC transporter substrate-binding protein;Dbxref=GO:0015412,GO:0015689,GO:0030288,GO:0030973,GO:0055052;gene=modA;Parent=GCA000560365_02381_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0725,COG:P,RefSeq:WP_000769517.1,SO:0001217,UniParc:UPI00004B5C9B,UniRef:UniRef100_Q2FVX4,UniRef:UniRef50_Q4L8E3,UniRef:UniRef90_A0A0U1MSA4
contig_1	Pyrodigal	gene	2402147	2402944	.	+	.	ID=GCA000560365_02382_gene;locus_tag=GCA000560365_02382;gene=fdhD
contig_1	Pyrodigal	CDS	2402147	2402944	.	+	0	ID=GCA000560365_02382;Name=formate dehydrogenase accessory sulfurtransferase FdhD;locus_tag=GCA000560365_02382;product=formate dehydrogenase accessory sulfurtransferase FdhD;Dbxref=GO:0005737,GO:0006777,GO:0009061,GO:0009326,GO:0015942,GO:0016783,GO:0097163;gene=fdhD;Parent=GCA000560365_02382_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1526,KEGG:K02379,RefSeq:WP_001030825.1,SO:0001217,UniParc:UPI00000547A4,UniRef:UniRef100_Q2FVX3,UniRef:UniRef50_P64120,UniRef:UniRef90_P64120
contig_1	Pyrodigal	gene	2403116	2403886	.	-	.	ID=GCA000560365_02383_gene;locus_tag=GCA000560365_02383
contig_1	Pyrodigal	CDS	2403116	2403886	.	-	0	ID=GCA000560365_02383;Name=N-acetyltransferase domain-containing protein;locus_tag=GCA000560365_02383;product=N-acetyltransferase domain-containing protein;Parent=GCA000560365_02383_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000146745.1,SO:0001217,UniParc:UPI00004B5C9C,UniRef:UniRef100_Q2FVX2,UniRef:UniRef50_Q2FVX2,UniRef:UniRef90_Q2FVX2
contig_1	Pyrodigal	gene	2403958	2404512	.	-	.	ID=GCA000560365_02384_gene;locus_tag=GCA000560365_02384;gene=bioY
contig_1	Pyrodigal	CDS	2403958	2404512	.	-	0	ID=GCA000560365_02384;Name=Biotin transporter;locus_tag=GCA000560365_02384;product=Biotin transporter;gene=bioY;Parent=GCA000560365_02384_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1268,COG:H,KEGG:K03523,RefSeq:WP_000208736.1,SO:0001217,UniParc:UPI00004B5C9D,UniRef:UniRef100_A0A0E7RMI7,UniRef:UniRef50_A0A0E7RMI7,UniRef:UniRef90_A0A0E7RMI7
contig_1	Pyrodigal	gene	2404633	2405574	.	-	.	ID=GCA000560365_02385_gene;locus_tag=GCA000560365_02385;gene=uRH1
contig_1	Pyrodigal	CDS	2404633	2405574	.	-	0	ID=GCA000560365_02385;Name=Purine nucleosidase;locus_tag=GCA000560365_02385;product=Purine nucleosidase;gene=uRH1;Parent=GCA000560365_02385_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1957,COG:F,RefSeq:WP_000163416.1,SO:0001217,UniParc:UPI00000D787E,UniRef:UniRef100_Q2FVX0,UniRef:UniRef50_A0A2S6DCG5,UniRef:UniRef90_A0A2S6DCG5
contig_1	Pyrodigal	gene	2405973	2406881	.	-	.	ID=GCA000560365_02386_gene;locus_tag=GCA000560365_02386;gene=fepB
contig_1	Pyrodigal	CDS	2405973	2406881	.	-	0	ID=GCA000560365_02386;Name=Fe/B12 periplasmic-binding domain-containing protein;locus_tag=GCA000560365_02386;product=Fe/B12 periplasmic-binding domain-containing protein;gene=fepB;Parent=GCA000560365_02386_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0614,COG:P,RefSeq:WP_000735038.1,SO:0001217,UniParc:UPI00000547D7,UniRef:UniRef100_Q2FVW9,UniRef:UniRef50_A0A0S4MA85,UniRef:UniRef90_Q2FVW9
contig_1	Pyrodigal	gene	2407095	2408249	.	-	.	ID=GCA000560365_02387_gene;locus_tag=GCA000560365_02387;gene=caiA
contig_1	Pyrodigal	CDS	2407095	2408249	.	-	0	ID=GCA000560365_02387;Name=Acyl-CoA dehydrogenase;locus_tag=GCA000560365_02387;product=Acyl-CoA dehydrogenase;gene=caiA;Parent=GCA000560365_02387_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1960,COG:I,RefSeq:WP_000999205.1,SO:0001217,UniParc:UPI00000CA9D6,UniRef:UniRef100_Q2FVW8,UniRef:UniRef50_A0A380FY69,UniRef:UniRef90_A0A380DW78
contig_1	Pyrodigal	gene	2408466	2409371	.	-	.	ID=GCA000560365_02388_gene;locus_tag=GCA000560365_02388;gene=yut
contig_1	Pyrodigal	CDS	2408466	2409371	.	-	0	ID=GCA000560365_02388;Name=urea transporter;locus_tag=GCA000560365_02388;product=urea transporter;Dbxref=GO:0015204,GO:0015840,GO:0016020;gene=yut;Parent=GCA000560365_02388_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4413,COG:E,RefSeq:WP_000691095.1,SO:0001217,UniParc:UPI00004B5C9E,UniRef:UniRef100_X5DZB1,UniRef:UniRef50_A0A0H3KEG3,UniRef:UniRef90_A0A0H3KEG3
contig_1	Pyrodigal	gene	2409631	2409933	.	+	.	ID=GCA000560365_02389_gene;locus_tag=GCA000560365_02389;gene=ureA
contig_1	Pyrodigal	CDS	2409631	2409933	.	+	0	ID=GCA000560365_02389;Name=urease subunit gamma;locus_tag=GCA000560365_02389;product=urease subunit gamma;Dbxref=GO:0005737,GO:0009039,GO:0016151,GO:0043419;gene=ureA;Parent=GCA000560365_02389_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0831,COG:E,RefSeq:WP_000545928.1,SO:0001217,UniParc:UPI00000D77A0,UniRef:UniRef100_Q2FVW5,UniRef:UniRef50_Q89UG3,UniRef:UniRef90_Q2FVW5;ec_number=3.5.1.5
contig_1	Pyrodigal	gene	2409947	2410357	.	+	.	ID=GCA000560365_02390_gene;locus_tag=GCA000560365_02390;gene=ureB
contig_1	Pyrodigal	CDS	2409947	2410357	.	+	0	ID=GCA000560365_02390;Name=urease subunit beta;locus_tag=GCA000560365_02390;product=urease subunit beta;Dbxref=GO:0009039,GO:0035550,GO:0043419;gene=ureB;Parent=GCA000560365_02390_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0832,COG:E,RefSeq:WP_000612128.1,SO:0001217,UniParc:UPI0000054802,UniRef:UniRef100_Q2G2K6,UniRef:UniRef50_Q4A0J4,UniRef:UniRef90_Q2YYQ7;ec_number=3.5.1.5
contig_1	Pyrodigal	gene	2410354	2412069	.	+	.	ID=GCA000560365_02391_gene;locus_tag=GCA000560365_02391;gene=ureC
contig_1	Pyrodigal	CDS	2410354	2412069	.	+	0	ID=GCA000560365_02391;Name=urease subunit alpha;locus_tag=GCA000560365_02391;product=urease subunit alpha;Dbxref=GO:0005737,GO:0009039,GO:0016151,GO:0019627,GO:0043419;gene=ureC;Parent=GCA000560365_02391_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0804,COG:E,RefSeq:WP_000008673.1,SO:0001217,UniParc:UPI000005480D,UniRef:UniRef100_Q2G2K5,UniRef:UniRef50_P17086,UniRef:UniRef90_Q2G2K5;ec_number=3.5.1.5
contig_1	Infernal	gene	2410505	2410807	.	-	.	ID=GCA000560365_02392_gene;locus_tag=GCA000560365_02392;gene=5_ureB_sRNA
contig_1	Infernal	ncRNA	2410505	2410807	4.7e-09	-	.	ID=GCA000560365_02392;Name=5' ureB small RNA;locus_tag=GCA000560365_02392;product=5' ureB small RNA;Dbxref=RFAM:RF02514;Parent=GCA000560365_02392_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02514
contig_1	Pyrodigal	gene	2412082	2412534	.	+	.	ID=GCA000560365_02393_gene;locus_tag=GCA000560365_02393;gene=ureE
contig_1	Pyrodigal	CDS	2412082	2412534	.	+	0	ID=GCA000560365_02393;Name=urease accessory protein UreE;locus_tag=GCA000560365_02393;product=urease accessory protein UreE;Dbxref=GO:0005737,GO:0006457,GO:0016151,GO:0019627,GO:0051082,GO:0065003;gene=ureE;Parent=GCA000560365_02393_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2371,COG:O,RefSeq:WP_000634589.1,SO:0001217,UniParc:UPI0000054814,UniRef:UniRef100_Q2G2K8,UniRef:UniRef50_Q2G2K8,UniRef:UniRef90_Q2G2K8
contig_1	Pyrodigal	gene	2412527	2413216	.	+	.	ID=GCA000560365_02394_gene;locus_tag=GCA000560365_02394;gene=ureF
contig_1	Pyrodigal	CDS	2412527	2413216	.	+	0	ID=GCA000560365_02394;Name=Urease accessory protein UreF;locus_tag=GCA000560365_02394;product=Urease accessory protein UreF;Dbxref=GO:0005737,GO:0016151;gene=ureF;Parent=GCA000560365_02394_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0830,COG:O,RefSeq:WP_000565255.1,SO:0001217,UniParc:UPI000005481F,UniRef:UniRef100_Q2G2K7,UniRef:UniRef50_Q2G2K7,UniRef:UniRef90_Q2G2K7
contig_1	Pyrodigal	gene	2413229	2413843	.	+	.	ID=GCA000560365_02395_gene;locus_tag=GCA000560365_02395;gene=ureG
contig_1	Pyrodigal	CDS	2413229	2413843	.	+	0	ID=GCA000560365_02395;Name=urease accessory protein UreG;locus_tag=GCA000560365_02395;product=urease accessory protein UreG;Dbxref=GO:0003924,GO:0005525,GO:0005737,GO:0016151,GO:0016530,GO:0019627,GO:0043419,GO:0046872;gene=ureG;Parent=GCA000560365_02395_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0378,COG:O,KEGG:K03189,RefSeq:WP_000002973.1,SO:0001217,UniParc:UPI00000CAABE,UniRef:UniRef100_Q2G273,UniRef:UniRef50_P18319,UniRef:UniRef90_Q2G273
contig_1	Pyrodigal	gene	2413843	2414679	.	+	.	ID=GCA000560365_02396_gene;locus_tag=GCA000560365_02396;gene=ureD
contig_1	Pyrodigal	CDS	2413843	2414679	.	+	0	ID=GCA000560365_02396;Name=Urease accessory protein UreD;locus_tag=GCA000560365_02396;product=Urease accessory protein UreD;Dbxref=GO:0005737,GO:0016151;gene=ureD;Parent=GCA000560365_02396_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0829,COG:O,RefSeq:WP_000344352.1,SO:0001217,UniParc:UPI0000054834,UniRef:UniRef100_Q2G272,UniRef:UniRef50_Q2G272,UniRef:UniRef90_Q2G272
contig_1	Infernal	gene	2414732	2414816	.	-	.	ID=GCA000560365_02397_gene;locus_tag=GCA000560365_02397;gene=tsr33
contig_1	Infernal	ncRNA	2414732	2414816	2.9e-17	-	.	ID=GCA000560365_02397;Name=S. aureus tsr33 small RNA;locus_tag=GCA000560365_02397;product=S. aureus tsr33 small RNA;Dbxref=RFAM:RF02582;Parent=GCA000560365_02397_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02582
contig_1	Pyrodigal	gene	2414868	2415215	.	-	.	ID=GCA000560365_02398_gene;locus_tag=GCA000560365_02398;gene=sarR
contig_1	Pyrodigal	CDS	2414868	2415215	.	-	0	ID=GCA000560365_02398;Name=HTH-type transcriptional regulator SarR;locus_tag=GCA000560365_02398;product=HTH-type transcriptional regulator SarR;Dbxref=GO:0003677,GO:0003700,GO:0005737,GO:0006950,GO:0008643,GO:0015144,GO:0055085;gene=sarR;Parent=GCA000560365_02398_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000036076,RefSeq:WP_000036076.1,SO:0001217,UniParc:UPI00000D7855,UniRef:UniRef100_Q9F0R1,UniRef:UniRef50_P0AEX9,UniRef:UniRef90_Q9F0R1;ec_number=7.5.2.1
contig_1	Pyrodigal	gene	2415643	2415969	.	-	.	ID=GCA000560365_02399_gene;locus_tag=GCA000560365_02399
contig_1	Pyrodigal	CDS	2415643	2415969	.	-	0	ID=GCA000560365_02399;Name=YokE-like PH domain-containing protein;locus_tag=GCA000560365_02399;product=YokE-like PH domain-containing protein;Parent=GCA000560365_02399_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000599587.1,SO:0001217,UniParc:UPI00004B5C9F,UniRef:UniRef100_Q2G270,UniRef:UniRef50_Q2G270,UniRef:UniRef90_Q2G270
contig_1	Pyrodigal	gene	2416033	2416776	.	-	.	ID=GCA000560365_02400_gene;locus_tag=GCA000560365_02400
contig_1	Pyrodigal	CDS	2416033	2416776	.	-	0	ID=GCA000560365_02400;Name=Transcriptional regulator SarA/SarZ/Rot-like helix-turn-helix domain-containing protein;locus_tag=GCA000560365_02400;product=Transcriptional regulator SarA/SarZ/Rot-like helix-turn-helix domain-containing protein;Parent=GCA000560365_02400_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000032855.1,SO:0001217,UniParc:UPI00004B5CA0,UniRef:UniRef100_A0A0E7R3Y1,UniRef:UniRef50_Q2G2J5,UniRef:UniRef90_Q2G2J5
contig_1	Pyrodigal	gene	2416802	2418757	.	-	.	ID=GCA000560365_02401_gene;locus_tag=GCA000560365_02401;gene=araC
contig_1	Pyrodigal	CDS	2416802	2418757	.	-	0	ID=GCA000560365_02401;Name=HTH araC/xylS-type domain-containing protein;locus_tag=GCA000560365_02401;product=HTH araC/xylS-type domain-containing protein;gene=araC;Parent=GCA000560365_02401_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2207,COG:K,RefSeq:WP_000131830.1,SO:0001217,UniParc:UPI0000696CC9,UniRef:UniRef100_A0A5A8VQU7,UniRef:UniRef50_Q2G2J4,UniRef:UniRef90_Q2G2J4
contig_1	Pyrodigal	gene	2419367	2420170	.	+	.	ID=GCA000560365_02402_gene;locus_tag=GCA000560365_02402;gene=ssaA2
contig_1	Pyrodigal	CDS	2419367	2420170	.	+	0	ID=GCA000560365_02402;Name=Staphylococcal secretory antigen ssaA2;locus_tag=GCA000560365_02402;product=Staphylococcal secretory antigen ssaA2;Dbxref=GO:0005576;gene=ssaA2;Parent=GCA000560365_02402_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3942,COG:M,RefSeq:WP_000717381.1,SO:0001217,UniParc:UPI000005225C,UniRef:UniRef100_Q2G2J2,UniRef:UniRef50_Q2G2J2,UniRef:UniRef90_Q2G2J2
contig_1	Infernal	gene	2420171	2420602	.	+	.	ID=GCA000560365_02403_gene;locus_tag=GCA000560365_02403;gene=Teg23
contig_1	Infernal	ncRNA	2420171	2420602	2.2e-62	+	.	ID=GCA000560365_02403;Name=S. aureus Teg23 small RNA;locus_tag=GCA000560365_02403;product=S. aureus Teg23 small RNA;Dbxref=RFAM:RF02583;Parent=GCA000560365_02403_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02583
contig_1	Pyrodigal	gene	2420603	2422000	.	-	.	ID=GCA000560365_02404_gene;locus_tag=GCA000560365_02404;gene=nhaC
contig_1	Pyrodigal	CDS	2420603	2422000	.	-	0	ID=GCA000560365_02404;Name=Na+/H+ antiporter NhaC;locus_tag=GCA000560365_02404;product=Na+/H+ antiporter NhaC;Dbxref=GO:0006814,GO:0015297,GO:0015385,GO:0016020,GO:1902600;gene=nhaC;Parent=GCA000560365_02404_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1757,KEGG:K03315,SO:0001217,UniParc:UPI0002C953FC,UniRef:UniRef100_Q2G2J3,UniRef:UniRef50_A0A291JHU7,UniRef:UniRef90_A0A0E1XBW8
contig_1	Pyrodigal	gene	2422098	2423180	.	-	.	ID=GCA000560365_02405_gene;locus_tag=GCA000560365_02405;gene=gpsA
contig_1	Pyrodigal	CDS	2422098	2423180	.	-	0	ID=GCA000560365_02405;Name=6-phosphogluconate dehydrogenase%2C decarboxylating;locus_tag=GCA000560365_02405;product=6-phosphogluconate dehydrogenase%2C decarboxylating;gene=gpsA;Parent=GCA000560365_02405_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0240,KEGG:K04940,RefSeq:WP_000684567.1,SO:0001217,UniParc:UPI00000D7680,UniRef:UniRef100_Q2G1W0,UniRef:UniRef50_A0A7Z7QNB8,UniRef:UniRef90_A0A077UKH6;ec_number=1.5.1.28
contig_1	Pyrodigal	gene	2423428	2423850	.	+	.	ID=GCA000560365_02406_gene;locus_tag=GCA000560365_02406;gene=tic20a
contig_1	Pyrodigal	CDS	2423428	2423850	.	+	0	ID=GCA000560365_02406;Name=DUF4870 domain-containing protein;locus_tag=GCA000560365_02406;product=DUF4870 domain-containing protein;gene=tic20a;Parent=GCA000560365_02406_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3296,COG:R,KEGG:K09940,RefSeq:WP_000206108.1,SO:0001217,UniParc:UPI0000054358,UniRef:UniRef100_Q2G1V8,UniRef:UniRef50_Q2G1V8,UniRef:UniRef90_Q2G1V8
contig_1	Pyrodigal	gene	2424087	2424587	.	+	.	ID=GCA000560365_02407_gene;locus_tag=GCA000560365_02407;gene=ssaA
contig_1	Pyrodigal	CDS	2424087	2424587	.	+	0	ID=GCA000560365_02407;Name=Secretory antigen SsaA;locus_tag=GCA000560365_02407;product=Secretory antigen SsaA;gene=ssaA;Parent=GCA000560365_02407_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3942,COG:M,RefSeq:WP_000737705.1,SO:0001217,UniParc:UPI000005434E,UniRef:UniRef100_Q2G1W1,UniRef:UniRef50_A0A2I7YA24,UniRef:UniRef90_A0A2I7YA24
contig_1	Pyrodigal	gene	2424949	2425902	.	+	.	ID=GCA000560365_02408_gene;locus_tag=GCA000560365_02408;gene=ldhA
contig_1	Pyrodigal	CDS	2424949	2425902	.	+	0	ID=GCA000560365_02408;Name=Putative 2-hydroxyacid dehydrogenase MW2224;locus_tag=GCA000560365_02408;product=Putative 2-hydroxyacid dehydrogenase MW2224;Dbxref=GO:0016616,GO:0051287;gene=ldhA;Parent=GCA000560365_02408_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CHR,COG:COG1052,RefSeq:WP_000417016.1,SO:0001217,UniParc:UPI0000054343,UniRef:UniRef100_Q2FVW4,UniRef:UniRef50_Q2FVW4,UniRef:UniRef90_Q2FVW4;ec_number=1.1.1.-
contig_1	Pyrodigal	gene	2425994	2427118	.	-	.	ID=GCA000560365_02409_gene;locus_tag=GCA000560365_02409;gene=ubiH
contig_1	Pyrodigal	CDS	2425994	2427118	.	-	0	ID=GCA000560365_02409;Name=Salicylate hydroxylase;locus_tag=GCA000560365_02409;product=Salicylate hydroxylase;gene=ubiH;Parent=GCA000560365_02409_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0654,COG:HC,RefSeq:WP_000684141.1,SO:0001217,UniParc:UPI0000054329,UniRef:UniRef100_Q2FVW3,UniRef:UniRef50_A0A380C5V0,UniRef:UniRef90_A0A2K4AFY1
contig_1	Pyrodigal	gene	2427429	2428205	.	-	.	ID=GCA000560365_02410_gene;locus_tag=GCA000560365_02410;gene=lytD
contig_1	Pyrodigal	CDS	2427429	2428205	.	-	0	ID=GCA000560365_02410;Name=Autolysin;locus_tag=GCA000560365_02410;product=Autolysin;gene=lytD;Parent=GCA000560365_02410_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4193,COG:G,RefSeq:WP_000739224.1,SO:0001217,UniParc:UPI000005431F,UniRef:UniRef100_Q2FVW2,UniRef:UniRef50_A0A170I2K6,UniRef:UniRef90_A0A170I2K6
contig_1	Pyrodigal	gene	2428227	2428460	.	-	.	ID=GCA000560365_02411_gene;locus_tag=GCA000560365_02411
contig_1	Pyrodigal	CDS	2428227	2428460	.	-	0	ID=GCA000560365_02411;Name=Group-Specific protein;locus_tag=GCA000560365_02411;product=Group-Specific protein;Parent=GCA000560365_02411_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000921246.1,SO:0001217,UniParc:UPI000069AB4E,UniRef:UniRef100_Q2FVW1,UniRef:UniRef50_A0A640MZA9,UniRef:UniRef90_Q2FVW1
contig_1	Pyrodigal	gene	2428688	2429161	.	-	.	ID=GCA000560365_02412_gene;locus_tag=GCA000560365_02412;gene=forE
contig_1	Pyrodigal	CDS	2428688	2429161	.	-	0	ID=GCA000560365_02412;Name=DUF1641 domain-containing protein;locus_tag=GCA000560365_02412;product=DUF1641 domain-containing protein;gene=forE;Parent=GCA000560365_02412_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG2427,RefSeq:WP_000840811.1,SO:0001217,UniParc:UPI0000054318,UniRef:UniRef100_Q2FVW0,UniRef:UniRef50_Q2FVW0,UniRef:UniRef90_Q2FVW0
contig_1	Pyrodigal	gene	2429161	2432199	.	-	.	ID=GCA000560365_02413_gene;locus_tag=GCA000560365_02413;gene=fdhF
contig_1	Pyrodigal	CDS	2429161	2432199	.	-	0	ID=GCA000560365_02413;Name=formate dehydrogenase subunit alpha;locus_tag=GCA000560365_02413;product=formate dehydrogenase subunit alpha;Dbxref=GO:0003954,GO:0008863,GO:0009326,GO:0015942,GO:0016020,GO:0022904,GO:0043546,GO:0046872,GO:0051537,GO:0051539;gene=fdhF;Parent=GCA000560365_02413_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG3383,SO:0001217,UniParc:UPI0001E097FA,UniRef:UniRef100_Q2FVV9,UniRef:UniRef50_Q49ZN0,UniRef:UniRef90_Q99RW4;ec_number=1.17.1.9
contig_1	Pyrodigal	gene	2432717	2433664	.	-	.	ID=GCA000560365_02414_gene;locus_tag=GCA000560365_02414;gene=cps2a
contig_1	Pyrodigal	CDS	2432717	2433664	.	-	0	ID=GCA000560365_02414;Name=LytR family transcriptional regulator;locus_tag=GCA000560365_02414;product=LytR family transcriptional regulator;gene=cps2a;Parent=GCA000560365_02414_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1316,COG:M,KEGG:K01005,RefSeq:WP_000831055.1,SO:0001217,UniParc:UPI00000D775D,UniRef:UniRef100_Q2FVV8,UniRef:UniRef50_A0A640MZN0,UniRef:UniRef90_A0A077UH28;ec_number=2.7.8.-
contig_1	Pyrodigal	gene	2433797	2434594	.	-	.	ID=GCA000560365_02415_gene;locus_tag=GCA000560365_02415;gene=suhB
contig_1	Pyrodigal	CDS	2433797	2434594	.	-	0	ID=GCA000560365_02415;Name=Inositol monophosphatase family protein;locus_tag=GCA000560365_02415;product=Inositol monophosphatase family protein;gene=suhB;Parent=GCA000560365_02415_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0483,COG:G,RefSeq:WP_000130454.1,SO:0001217,UniParc:UPI00000CAC44,UniRef:UniRef100_Q2FVV7,UniRef:UniRef50_Q2FVV7,UniRef:UniRef90_Q2FVV7
contig_1	Infernal	gene	2434688	2434831	.	-	.	ID=GCA000560365_02416_gene;locus_tag=GCA000560365_02416;gene=RsaOG
contig_1	Infernal	ncRNA	2434688	2434831	7e-23	-	.	ID=GCA000560365_02416;Name=RNA S.aureus Orsay G;locus_tag=GCA000560365_02416;product=RNA S.aureus Orsay G;Dbxref=RFAM:RF01775;Parent=GCA000560365_02416_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01775
contig_1	Pyrodigal	gene	2434979	2435671	.	+	.	ID=GCA000560365_02417_gene;locus_tag=GCA000560365_02417;gene=yobV
contig_1	Pyrodigal	CDS	2434979	2435671	.	+	0	ID=GCA000560365_02417;Name=HTH deoR-type domain-containing protein;locus_tag=GCA000560365_02417;product=HTH deoR-type domain-containing protein;gene=yobV;Parent=GCA000560365_02417_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2378,COG:K,RefSeq:WP_001030125.1,SO:0001217,UniParc:UPI00000D7807,UniRef:UniRef100_Q2FVV6,UniRef:UniRef50_Q2FVV6,UniRef:UniRef90_Q2FVV6
contig_1	Infernal	gene	2435712	2435932	.	-	.	ID=GCA000560365_02418_gene;locus_tag=GCA000560365_02418;gene=tsr24
contig_1	Infernal	ncRNA	2435712	2435932	7.2e-27	-	.	ID=GCA000560365_02418;Name=S. aureus tsr24 small RNA;locus_tag=GCA000560365_02418;product=S. aureus tsr24 small RNA;Dbxref=RFAM:RF02577;Parent=GCA000560365_02418_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02577
contig_1	Pyrodigal	gene	2436318	2437055	.	-	.	ID=GCA000560365_02419_gene;locus_tag=GCA000560365_02419;gene=sdpB
contig_1	Pyrodigal	CDS	2436318	2437055	.	-	0	ID=GCA000560365_02419;Name=CPBP family intramembrane metalloprotease SdpB;locus_tag=GCA000560365_02419;product=CPBP family intramembrane metalloprotease SdpB;gene=sdpB;Parent=GCA000560365_02419_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000426696,COG:COG1266,COG:O,RefSeq:WP_000426696.1,SO:0001217,UniParc:UPI00000D779E,UniRef:UniRef100_Q2FVV4,UniRef:UniRef50_Q2FVV4,UniRef:UniRef90_Q2FVV4
contig_1	Pyrodigal	gene	2437104	2437433	.	+	.	ID=GCA000560365_02420_gene;locus_tag=GCA000560365_02420
contig_1	Pyrodigal	CDS	2437104	2437433	.	+	0	ID=GCA000560365_02420;Name=Transmembrane protein;locus_tag=GCA000560365_02420;product=Transmembrane protein;Parent=GCA000560365_02420_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000606726.1,SO:0001217,UniParc:UPI00000542D6,UniRef:UniRef100_Q2FVV3,UniRef:UniRef50_Q2FVV3,UniRef:UniRef90_Q2FVV3
contig_1	Pyrodigal	gene	2437878	2438750	.	+	.	ID=GCA000560365_02421_gene;locus_tag=GCA000560365_02421;gene=rpiR
contig_1	Pyrodigal	CDS	2437878	2438750	.	+	0	ID=GCA000560365_02421;Name=MurR/RpiR family transcriptional regulator;locus_tag=GCA000560365_02421;product=MurR/RpiR family transcriptional regulator;gene=rpiR;Parent=GCA000560365_02421_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1737,COG:K,RefSeq:WP_000073195.1,SO:0001217,UniParc:UPI00000D7730,UniRef:UniRef100_Q2FVV2,UniRef:UniRef50_Q2FVV2,UniRef:UniRef90_Q2FVV2
contig_1	Pyrodigal	gene	2439137	2440516	.	-	.	ID=GCA000560365_02422_gene;locus_tag=GCA000560365_02422;gene=ansP
contig_1	Pyrodigal	CDS	2439137	2440516	.	-	0	ID=GCA000560365_02422;Name=Amino acid permease/ SLC12A domain-containing protein;locus_tag=GCA000560365_02422;product=Amino acid permease/ SLC12A domain-containing protein;gene=ansP;Parent=GCA000560365_02422_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1113,COG:E,RefSeq:WP_000429674.1,SO:0001217,UniParc:UPI00000542BA,UniRef:UniRef100_Q2FVV1,UniRef:UniRef50_P27837,UniRef:UniRef90_Q2FVV1
contig_1	Pyrodigal	gene	2440796	2441152	.	+	.	ID=GCA000560365_02423_gene;locus_tag=GCA000560365_02423
contig_1	Pyrodigal	CDS	2440796	2441152	.	+	0	ID=GCA000560365_02423;Name=Group-Specific protein;locus_tag=GCA000560365_02423;product=Group-Specific protein;Parent=GCA000560365_02423_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000917664.1,SO:0001217,UniParc:UPI00000D9F7B,UniRef:UniRef100_Q2FVV0,UniRef:UniRef50_A0A640MZ73,UniRef:UniRef90_Q2FVV0
contig_1	Pyrodigal	gene	2441149	2441334	.	+	.	ID=GCA000560365_02424_gene;locus_tag=GCA000560365_02424
contig_1	Pyrodigal	CDS	2441149	2441334	.	+	0	ID=GCA000560365_02424;Name=Mid2-like cell wall stress sensor domain protein;locus_tag=GCA000560365_02424;product=Mid2-like cell wall stress sensor domain protein;Parent=GCA000560365_02424_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000205307.1,SO:0001217,UniParc:UPI00000549F6,UniRef:UniRef100_Q2FVU9,UniRef:UniRef50_Q2FVU9,UniRef:UniRef90_Q2FVU9
contig_1	Pyrodigal	gene	2441430	2441618	.	-	.	ID=GCA000560365_02425_gene;locus_tag=GCA000560365_02425
contig_1	Pyrodigal	CDS	2441430	2441618	.	-	0	ID=GCA000560365_02425;Name=Haloacid dehalogenase-like hydrolase;locus_tag=GCA000560365_02425;product=Haloacid dehalogenase-like hydrolase;Parent=GCA000560365_02425_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001BE5C4B,UniRef:UniRef100_Q2FVU8,UniRef:UniRef50_Q2FVU7,UniRef:UniRef90_Q2FVU8
contig_1	Pyrodigal	gene	2441632	2442267	.	-	.	ID=GCA000560365_02426_gene;locus_tag=GCA000560365_02426;gene=ycjU
contig_1	Pyrodigal	CDS	2441632	2442267	.	-	0	ID=GCA000560365_02426;Name=HAD family hydrolase;locus_tag=GCA000560365_02426;product=HAD family hydrolase;gene=ycjU;Parent=GCA000560365_02426_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0637,COG:G,RefSeq:WP_000285450.1,SO:0001217,UniParc:UPI00000549F8,UniRef:UniRef100_Q2FVU7,UniRef:UniRef50_Q2FVU7,UniRef:UniRef90_Q2FVU7
contig_1	Pyrodigal	gene	2442342	2443259	.	-	.	ID=GCA000560365_02427_gene;locus_tag=GCA000560365_02427;gene=yfeH
contig_1	Pyrodigal	CDS	2442342	2443259	.	-	0	ID=GCA000560365_02427;Name=Bile acid:sodium symporter family protein;locus_tag=GCA000560365_02427;product=Bile acid:sodium symporter family protein;gene=yfeH;Parent=GCA000560365_02427_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0385,COG:R,KEGG:K03453,RefSeq:WP_000486816.1,SO:0001217,UniParc:UPI00004B5CA3,UniRef:UniRef100_Q2FVU6,UniRef:UniRef50_Q2FVU6,UniRef:UniRef90_Q2FVU6
contig_1	Pyrodigal	gene	2443527	2444057	.	+	.	ID=GCA000560365_02428_gene;locus_tag=GCA000560365_02428
contig_1	Pyrodigal	CDS	2443527	2444057	.	+	0	ID=GCA000560365_02428;Name=Homing endonuclease LAGLIDADG domain-containing protein;locus_tag=GCA000560365_02428;product=Homing endonuclease LAGLIDADG domain-containing protein;Parent=GCA000560365_02428_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000904065.1,SO:0001217,UniParc:UPI00000D765D,UniRef:UniRef100_Q2FVU5,UniRef:UniRef50_A0A974KZR7,UniRef:UniRef90_Q2FVU5
contig_1	Pyrodigal	gene	2444123	2445727	.	-	.	ID=GCA000560365_02429_gene;locus_tag=GCA000560365_02429;gene=ptsG2
contig_1	Pyrodigal	CDS	2444123	2445727	.	-	0	ID=GCA000560365_02429;Name=Alpha-glucoside-specific PTS transporter subunit IIBC;locus_tag=GCA000560365_02429;product=Alpha-glucoside-specific PTS transporter subunit IIBC;gene=ptsG2;Parent=GCA000560365_02429_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1264,COG:G,KEGG:K02750,RefSeq:WP_000991502.1,SO:0001217,UniParc:UPI00000549FC,UniRef:UniRef100_Q2FVU4,UniRef:UniRef50_P31452,UniRef:UniRef90_A0A2W3AI92;ec_number=2.7.1.208
contig_1	Pyrodigal	gene	2446057	2446821	.	+	.	ID=GCA000560365_02430_gene;locus_tag=GCA000560365_02430;gene=rpiR
contig_1	Pyrodigal	CDS	2446057	2446821	.	+	0	ID=GCA000560365_02430;Name=RpiR family transcriptional regulator;locus_tag=GCA000560365_02430;product=RpiR family transcriptional regulator;gene=rpiR;Parent=GCA000560365_02430_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1737,COG:K,RefSeq:WP_000477992.1,SO:0001217,UniParc:UPI00004B5CA5,UniRef:UniRef100_Q2FVU3,UniRef:UniRef50_A0A0D1GF60,UniRef:UniRef90_A0A0D1GF60
contig_1	Pyrodigal	gene	2446879	2447385	.	-	.	ID=GCA000560365_02431_gene;locus_tag=GCA000560365_02431;gene=yndB
contig_1	Pyrodigal	CDS	2446879	2447385	.	-	0	ID=GCA000560365_02431;Name=Activator of Hsp90 ATPase-like ue 1/2-like C-terminal domain-containing protein;locus_tag=GCA000560365_02431;product=Activator of Hsp90 ATPase-like ue 1/2-like C-terminal domain-containing protein;gene=yndB;Parent=GCA000560365_02431_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3832,COG:I,RefSeq:WP_001051556.1,SO:0001217,UniParc:UPI00000CAD43,UniRef:UniRef100_Q2FVU2,UniRef:UniRef50_Q2FVU2,UniRef:UniRef90_Q2FVU2
contig_1	Pyrodigal	gene	2447552	2448865	.	-	.	ID=GCA000560365_02432_gene;locus_tag=GCA000560365_02432;gene=nhaC
contig_1	Pyrodigal	CDS	2447552	2448865	.	-	0	ID=GCA000560365_02432;Name=Na+/H+ antiporter NhaC-like C-terminal domain-containing protein;locus_tag=GCA000560365_02432;product=Na+/H+ antiporter NhaC-like C-terminal domain-containing protein;gene=nhaC;Parent=GCA000560365_02432_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1757,RefSeq:WP_000451837.1,SO:0001217,UniParc:UPI00004B5CA6,UniRef:UniRef100_Q2FVU1,UniRef:UniRef50_G5JKB9,UniRef:UniRef90_G5JKB9
contig_1	Infernal	regulatory_region	2448942	2449037	2.5e-14	-	.	ID=KMHODOBJJH_176;Name=SAM riboswitch aptamer (S box leader);product=SAM riboswitch aptamer (S box leader);Dbxref=RFAM:RF00162;inference=profile:Rfam:RF00162;Note=SO:0000140;regulatory_class=attenuator
contig_1	Pyrodigal	gene	2449090	2449659	.	-	.	ID=GCA000560365_02433_gene;locus_tag=GCA000560365_02433
contig_1	Pyrodigal	CDS	2449090	2449659	.	-	0	ID=GCA000560365_02433;Name=DUF3796 domain-containing protein;locus_tag=GCA000560365_02433;product=DUF3796 domain-containing protein;Parent=GCA000560365_02433_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001185193.1,SO:0001217,UniParc:UPI0000054A00,UniRef:UniRef100_Q2FVT9,UniRef:UniRef50_A0A5S9I5V4,UniRef:UniRef90_Q2FVT9
contig_1	Pyrodigal	gene	2450146	2451027	.	-	.	ID=GCA000560365_02434_gene;locus_tag=GCA000560365_02434;gene=fabG
contig_1	Pyrodigal	CDS	2450146	2451027	.	-	0	ID=GCA000560365_02434;Name=SDR family oxidoreductase;locus_tag=GCA000560365_02434;product=SDR family oxidoreductase;gene=fabG;Parent=GCA000560365_02434_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1028,COG:I,RefSeq:WP_000730043.1,SO:0001217,UniParc:UPI0000054A01,UniRef:UniRef100_Q2FVT8,UniRef:UniRef50_D5DPI1,UniRef:UniRef90_Q2FVT8
contig_1	Pyrodigal	gene	2451138	2452259	.	-	.	ID=GCA000560365_02435_gene;locus_tag=GCA000560365_02435;gene=abgB
contig_1	Pyrodigal	CDS	2451138	2452259	.	-	0	ID=GCA000560365_02435;Name=Amidohydrolase;locus_tag=GCA000560365_02435;product=Amidohydrolase;gene=abgB;Parent=GCA000560365_02435_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1473,COG:R,RefSeq:WP_000523151.1,SO:0001217,UniParc:UPI00004B5CA7,UniRef:UniRef100_A0A0E7Q410,UniRef:UniRef50_A0A0E7Q410,UniRef:UniRef90_A0A0E7Q410
contig_1	Pyrodigal	gene	2452536	2453774	.	-	.	ID=GCA000560365_02436_gene;locus_tag=GCA000560365_02436;gene=hutI
contig_1	Pyrodigal	CDS	2452536	2453774	.	-	0	ID=GCA000560365_02436;Name=imidazolonepropionase;locus_tag=GCA000560365_02436;product=imidazolonepropionase;Dbxref=GO:0005506,GO:0005737,GO:0008270,GO:0016812,GO:0019556,GO:0019557,GO:0050480;gene=hutI;Parent=GCA000560365_02436_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1228,COG:Q,KEGG:K01468,RefSeq:WP_000998767.1,SO:0001217,UniParc:UPI0000054A04,UniRef:UniRef100_Q2FVT6,UniRef:UniRef50_Q2FVT6,UniRef:UniRef90_Q2FVT6;ec_number=3.5.2.7
contig_1	Pyrodigal	gene	2453774	2455435	.	-	.	ID=GCA000560365_02437_gene;locus_tag=GCA000560365_02437;gene=hutU
contig_1	Pyrodigal	CDS	2453774	2455435	.	-	0	ID=GCA000560365_02437;Name=urocanate hydratase;locus_tag=GCA000560365_02437;product=urocanate hydratase;Dbxref=GO:0005737,GO:0006548,GO:0016153,GO:0019556,GO:0019557;gene=hutU;Parent=GCA000560365_02437_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2987,COG:E,KEGG:K01712,RefSeq:WP_001226823.1,SO:0001217,UniParc:UPI0000054A05,UniRef:UniRef100_Q5HDM6,UniRef:UniRef50_Q8XW28,UniRef:UniRef90_Q931G1;ec_number=4.2.1.49
contig_1	Pyrodigal	gene	2455595	2456479	.	+	.	ID=GCA000560365_02438_gene;locus_tag=GCA000560365_02438;gene=lysR
contig_1	Pyrodigal	CDS	2455595	2456479	.	+	0	ID=GCA000560365_02438;Name=HTH lysR-type domain-containing protein;locus_tag=GCA000560365_02438;product=HTH lysR-type domain-containing protein;gene=lysR;Parent=GCA000560365_02438_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0583,COG:K,RefSeq:WP_000691839.1,SO:0001217,UniParc:UPI0000054A06,UniRef:UniRef100_Q2FVT4,UniRef:UniRef50_Q2FVT4,UniRef:UniRef90_Q2FVT4
contig_1	Pyrodigal	gene	2456601	2457020	.	+	.	ID=GCA000560365_02439_gene;locus_tag=GCA000560365_02439;gene=fosB
contig_1	Pyrodigal	CDS	2456601	2457020	.	+	0	ID=GCA000560365_02439;Name=FosB/FosD family fosfomycin resistance bacillithiol transferase;locus_tag=GCA000560365_02439;product=FosB/FosD family fosfomycin resistance bacillithiol transferase;Dbxref=GO:0000287,GO:0005737,GO:0016765,GO:0046677;gene=fosB;Parent=GCA000560365_02439_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0346,COG:Q,KEGG:K11210,NCBIProtein:WP_000920239.1,RefSeq:WP_000920239.1,SO:0001217,UniParc:UPI00000CAB5F,UniRef:UniRef100_Q2FVT3,UniRef:UniRef50_Q81RK2,UniRef:UniRef90_Q2FVT3;ec_number=2.5.1.-
contig_1	Pyrodigal	gene	2457276	2458211	.	-	.	ID=GCA000560365_02440_gene;locus_tag=GCA000560365_02440;gene=hutG
contig_1	Pyrodigal	CDS	2457276	2458211	.	-	0	ID=GCA000560365_02440;Name=formimidoylglutamase;locus_tag=GCA000560365_02440;product=formimidoylglutamase;Dbxref=GO:0008783,GO:0019556,GO:0019557,GO:0030145,GO:0033389,GO:0050415;gene=hutG;Parent=GCA000560365_02440_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0010,COG:E,KEGG:K01479,RefSeq:WP_000277968.1,SO:0001217,UniParc:UPI00000CAA06,UniRef:UniRef100_Q2FVT2,UniRef:UniRef50_Q2FVT2,UniRef:UniRef90_Q2FVT2;ec_number=3.5.3.8
contig_1	Pyrodigal	gene	2458501	2459760	.	+	.	ID=GCA000560365_02441_gene;locus_tag=GCA000560365_02441;gene=sdpC
contig_1	Pyrodigal	CDS	2458501	2459760	.	+	0	ID=GCA000560365_02441;Name=CPBP family intramembrane metalloprotease SdpC;locus_tag=GCA000560365_02441;product=CPBP family intramembrane metalloprotease SdpC;Dbxref=GO:0004222,GO:0005886,GO:0071586;gene=sdpC;Parent=GCA000560365_02441_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000794443,COG:COG1266,COG:O,RefSeq:WP_000794442.1,SO:0001217,UniParc:UPI0000054A09,UniRef:UniRef100_Q2FVT1,UniRef:UniRef50_Q2FVT1,UniRef:UniRef90_Q2FVT1
contig_1	Pyrodigal	gene	2459826	2460512	.	-	.	ID=GCA000560365_02442_gene;locus_tag=GCA000560365_02442;gene=rpiA
contig_1	Pyrodigal	CDS	2459826	2460512	.	-	0	ID=GCA000560365_02442;Name=ribose 5-phosphate isomerase A;locus_tag=GCA000560365_02442;product=ribose 5-phosphate isomerase A;Dbxref=GO:0004751,GO:0005829,GO:0006014,GO:0009052;gene=rpiA;Parent=GCA000560365_02442_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0120,COG:G,RefSeq:WP_000655864.1,SO:0001217,UniParc:UPI0000054A0A,UniRef:UniRef100_P66694,UniRef:UniRef50_Q5HLQ9,UniRef:UniRef90_P66694;ec_number=5.3.1.6
contig_1	Pyrodigal	gene	2460686	2461339	.	+	.	ID=GCA000560365_02443_gene;locus_tag=GCA000560365_02443;gene=yiiM
contig_1	Pyrodigal	CDS	2460686	2461339	.	+	0	ID=GCA000560365_02443;Name=MOSC domain-containing protein;locus_tag=GCA000560365_02443;product=MOSC domain-containing protein;gene=yiiM;Parent=GCA000560365_02443_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2258,COG:FV,RefSeq:WP_000623452.1,SO:0001217,UniParc:UPI00004B5CAA,UniRef:UniRef100_A0A0D3QA71,UniRef:UniRef50_Q5HLQ8,UniRef:UniRef90_Q2FVS9
contig_1	Pyrodigal	gene	2461575	2462594	.	-	.	ID=GCA000560365_02444_gene;locus_tag=GCA000560365_02444;gene=galM
contig_1	Pyrodigal	CDS	2461575	2462594	.	-	0	ID=GCA000560365_02444;Name=Aldose 1-epimerase;locus_tag=GCA000560365_02444;product=Aldose 1-epimerase;gene=galM;Parent=GCA000560365_02444_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2017,COG:G,RefSeq:WP_000634685.1,SO:0001217,UniParc:UPI0000054A0E,UniRef:UniRef100_Q2FVS7,UniRef:UniRef50_A0A0D6XRD3,UniRef:UniRef90_A0A2S6DDQ6
contig_1	Pyrodigal	gene	2462624	2462950	.	-	.	ID=GCA000560365_02445_gene;locus_tag=GCA000560365_02445;gene=ynfA
contig_1	Pyrodigal	CDS	2462624	2462950	.	-	0	ID=GCA000560365_02445;Name=YnfA family protein;locus_tag=GCA000560365_02445;product=YnfA family protein;Dbxref=GO:0005886,GO:0016020;gene=ynfA;Parent=GCA000560365_02445_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1742,COG:R,RefSeq:WP_000966695.1,SO:0001217,UniParc:UPI0000054A0F,UniRef:UniRef100_Q2FVS6,UniRef:UniRef50_O31553,UniRef:UniRef90_Q2FVS6
contig_1	Pyrodigal	gene	2463168	2464400	.	-	.	ID=GCA000560365_02446_gene;locus_tag=GCA000560365_02446;gene=natB
contig_1	Pyrodigal	CDS	2463168	2464400	.	-	0	ID=GCA000560365_02446;Name=ABC-2 type transporter transmembrane domain-containing protein;locus_tag=GCA000560365_02446;product=ABC-2 type transporter transmembrane domain-containing protein;gene=natB;Parent=GCA000560365_02446_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1668,COG:CP,RefSeq:WP_000548707.1,SO:0001217,UniParc:UPI00004B5CAB,UniRef:UniRef100_Q2FVS4,UniRef:UniRef50_Q2FVS4,UniRef:UniRef90_Q2FVS4
contig_1	Pyrodigal	gene	2464393	2465292	.	-	.	ID=GCA000560365_02447_gene;locus_tag=GCA000560365_02447;gene=yhaQ
contig_1	Pyrodigal	CDS	2464393	2465292	.	-	0	ID=GCA000560365_02447;Name=ABC transporter domain-containing protein;locus_tag=GCA000560365_02447;product=ABC transporter domain-containing protein;gene=yhaQ;Parent=GCA000560365_02447_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4152,COG:R,RefSeq:WP_000524836.1,SO:0001217,UniParc:UPI0000054A12,UniRef:UniRef100_Q2FVS3,UniRef:UniRef50_Q2FVS3,UniRef:UniRef90_Q2FVS3
contig_1	Pyrodigal	gene	2465523	2466170	.	-	.	ID=GCA000560365_02448_gene;locus_tag=GCA000560365_02448;gene=yhaH
contig_1	Pyrodigal	CDS	2465523	2466170	.	-	0	ID=GCA000560365_02448;Name=DUF805 domain-containing protein;locus_tag=GCA000560365_02448;product=DUF805 domain-containing protein;gene=yhaH;Parent=GCA000560365_02448_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3152,COG:S,RefSeq:WP_000436818.1,SO:0001217,UniParc:UPI00004B5CAD,UniRef:UniRef100_Q2FVS2,UniRef:UniRef50_Q2FVS2,UniRef:UniRef90_Q2FVS2
contig_1	Pyrodigal	gene	2466569	2467177	.	+	.	ID=GCA000560365_02449_gene;locus_tag=GCA000560365_02449;gene=mpg
contig_1	Pyrodigal	CDS	2466569	2467177	.	+	0	ID=GCA000560365_02449;Name=Putative 3-methyladenine DNA glycosylase;locus_tag=GCA000560365_02449;product=Putative 3-methyladenine DNA glycosylase;Dbxref=GO:0003677,GO:0003905,GO:0006284;gene=mpg;Parent=GCA000560365_02449_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2094,COG:L,RefSeq:WP_000348300.1,SO:0001217,UniParc:UPI0000054A15,UniRef:UniRef100_Q2FVS1,UniRef:UniRef50_Q2FVS1,UniRef:UniRef90_Q2FVS1;ec_number=3.2.2.-
contig_1	Pyrodigal	gene	2467514	2468722	.	+	.	ID=GCA000560365_02450_gene;locus_tag=GCA000560365_02450;gene=gltS
contig_1	Pyrodigal	CDS	2467514	2468722	.	+	0	ID=GCA000560365_02450;Name=sodium/glutamate symporter;locus_tag=GCA000560365_02450;product=sodium/glutamate symporter;Dbxref=GO:0015501,GO:0015813,GO:0016020;gene=gltS;Parent=GCA000560365_02450_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0786,COG:E,KEGG:K03312,RefSeq:WP_000571584.1,SO:0001217,UniParc:UPI00003B18F4,UniRef:UniRef100_Q2FVS0,UniRef:UniRef50_A0A380G4D5,UniRef:UniRef90_A0A390UCJ6
contig_1	Pyrodigal	gene	2468770	2469819	.	-	.	ID=GCA000560365_02451_gene;locus_tag=GCA000560365_02451;gene=fni
contig_1	Pyrodigal	CDS	2468770	2469819	.	-	0	ID=GCA000560365_02451;Name=type 2 isopentenyl-diphosphate Delta-isomerase;locus_tag=GCA000560365_02451;product=type 2 isopentenyl-diphosphate Delta-isomerase;Dbxref=GO:0000287,GO:0004452,GO:0005737,GO:0008299,GO:0010181,GO:0016491,GO:0070402;gene=fni;Parent=GCA000560365_02451_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CIR,COG:COG1304,RefSeq:WP_001279381.1,SO:0001217,UniParc:UPI0000054A18,UniRef:UniRef100_Q2FVR9,UniRef:UniRef50_Q2FVR9,UniRef:UniRef90_Q2FVR9;ec_number=5.3.3.2
contig_1	Pyrodigal	gene	2469850	2470797	.	-	.	ID=GCA000560365_02452_gene;locus_tag=GCA000560365_02452;gene=corA
contig_1	Pyrodigal	CDS	2469850	2470797	.	-	0	ID=GCA000560365_02452;Name=magnesium/cobalt transporter CorA;locus_tag=GCA000560365_02452;product=magnesium/cobalt transporter CorA;Dbxref=GO:0006824,GO:0015087,GO:0015095,GO:0015693,GO:0016020;gene=corA;Parent=GCA000560365_02452_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0598,COG:P,RefSeq:WP_001185431.1,SO:0001217,UniParc:UPI0000054A19,UniRef:UniRef100_Q2FVR8,UniRef:UniRef50_A0A2I7YA74,UniRef:UniRef90_A0A2I7YA74
contig_1	Pyrodigal	gene	2470894	2471385	.	+	.	ID=GCA000560365_02453_gene;locus_tag=GCA000560365_02453;gene=fadM
contig_1	Pyrodigal	CDS	2470894	2471385	.	+	0	ID=GCA000560365_02453;Name=Thioesterase;locus_tag=GCA000560365_02453;product=Thioesterase;gene=fadM;Parent=GCA000560365_02453_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0824,COG:I,RefSeq:WP_000234728.1,SO:0001217,UniParc:UPI00004B5CAE,UniRef:UniRef100_Q2FVR7,UniRef:UniRef50_Q2FVR7,UniRef:UniRef90_Q2FVR7
contig_1	Pyrodigal	gene	2471382	2471801	.	+	.	ID=GCA000560365_02454_gene;locus_tag=GCA000560365_02454
contig_1	Pyrodigal	CDS	2471382	2471801	.	+	0	ID=GCA000560365_02454;Name=Phage protein;locus_tag=GCA000560365_02454;product=Phage protein;Parent=GCA000560365_02454_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_031808153.1,SO:0001217,UniParc:UPI000450AF93,UniRef:UniRef100_UPI000450AF93,UniRef:UniRef50_A0A7X9WGR3,UniRef:UniRef90_Q2G2W6
contig_1	Pyrodigal	gene	2471909	2472829	.	-	.	ID=GCA000560365_02455_gene;locus_tag=GCA000560365_02455;gene=aes
contig_1	Pyrodigal	CDS	2471909	2472829	.	-	0	ID=GCA000560365_02455;Name=Alpha/beta hydrolase fold-3 domain-containing protein;locus_tag=GCA000560365_02455;product=Alpha/beta hydrolase fold-3 domain-containing protein;gene=aes;Parent=GCA000560365_02455_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0657,COG:I,RefSeq:WP_000620864.1,SO:0001217,UniParc:UPI00000CAD49,UniRef:UniRef100_Q2G2W3,UniRef:UniRef50_Q2G2W3,UniRef:UniRef90_Q2G2W3
contig_1	Pyrodigal	gene	2473037	2473675	.	+	.	ID=GCA000560365_02456_gene;locus_tag=GCA000560365_02456
contig_1	Pyrodigal	CDS	2473037	2473675	.	+	0	ID=GCA000560365_02456;Name=Membrane protein;locus_tag=GCA000560365_02456;product=Membrane protein;Parent=GCA000560365_02456_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000184227.1,SO:0001217,UniParc:UPI00004B5CB0,UniRef:UniRef100_A0A0D3QA38,UniRef:UniRef50_A0A1S2MLM7,UniRef:UniRef90_Q2G2W2
contig_1	Pyrodigal	gene	2473921	2475852	.	-	.	ID=GCA000560365_02457_gene;locus_tag=GCA000560365_02457;gene=araJ
contig_1	Pyrodigal	CDS	2473921	2475852	.	-	0	ID=GCA000560365_02457;Name=Quinolone resistance protein NorB;locus_tag=GCA000560365_02457;product=Quinolone resistance protein NorB;gene=araJ;Parent=GCA000560365_02457_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2814,COG:G,KEGG:K03446,RefSeq:WP_000213873.1,SO:0001217,UniParc:UPI0000696CCC,UniRef:UniRef100_A0A1S6E7Y9,UniRef:UniRef50_Q9F0Z1,UniRef:UniRef90_Q9F0Z1
contig_1	Pyrodigal	gene	2475865	2476512	.	-	.	ID=GCA000560365_02458_gene;locus_tag=GCA000560365_02458;gene=emrA
contig_1	Pyrodigal	CDS	2475865	2476512	.	-	0	ID=GCA000560365_02458;Name=Membrane fusion protein biotin-lipoyl like domain-containing protein;locus_tag=GCA000560365_02458;product=Membrane fusion protein biotin-lipoyl like domain-containing protein;gene=emrA;Parent=GCA000560365_02458_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1566,COG:V,RefSeq:WP_000738247.1,SO:0001217,UniParc:UPI0000054A1E,UniRef:UniRef100_Q2G2W5,UniRef:UniRef50_Q2G2W5,UniRef:UniRef90_Q2G2W5
contig_1	Pyrodigal	gene	2476633	2477184	.	+	.	ID=GCA000560365_02459_gene;locus_tag=GCA000560365_02459;gene=acrR
contig_1	Pyrodigal	CDS	2476633	2477184	.	+	0	ID=GCA000560365_02459;Name=HTH tetR-type domain-containing protein;locus_tag=GCA000560365_02459;product=HTH tetR-type domain-containing protein;gene=acrR;Parent=GCA000560365_02459_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1309,COG:K,RefSeq:WP_000828570.1,SO:0001217,UniParc:UPI0000054A1F,UniRef:UniRef100_Q2G2W4,UniRef:UniRef50_Q2G2W4,UniRef:UniRef90_Q2G2W4
contig_1	Pyrodigal	gene	2477414	2478622	.	-	.	ID=GCA000560365_02460_gene;locus_tag=GCA000560365_02460;gene=araJ
contig_1	Pyrodigal	CDS	2477414	2478622	.	-	0	ID=GCA000560365_02460;Name=Bcr/CflA family efflux transporter;locus_tag=GCA000560365_02460;product=Bcr/CflA family efflux transporter;gene=araJ;Parent=GCA000560365_02460_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2814,COG:G,KEGG:K07552,RefSeq:WP_000999131.1,SO:0001217,UniParc:UPI00000D7674,UniRef:UniRef100_Q9F4G1,UniRef:UniRef50_Q9F4G1,UniRef:UniRef90_Q9F4G1
contig_1	Pyrodigal	gene	2478891	2480273	.	-	.	ID=GCA000560365_02461_gene;locus_tag=GCA000560365_02461;gene=tcaA
contig_1	Pyrodigal	CDS	2478891	2480273	.	-	0	ID=GCA000560365_02461;Name=Membrane-associated protein TcaA;locus_tag=GCA000560365_02461;product=Membrane-associated protein TcaA;Dbxref=GO:0005886,GO:0046677,GO:0046872;gene=tcaA;Parent=GCA000560365_02461_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4640,COG:S,KEGG:K21463,RefSeq:WP_000833797.1,SO:0001217,UniParc:UPI0000054A22,UniRef:UniRef100_Q2G2I1,UniRef:UniRef50_Q5HDJ9,UniRef:UniRef90_Q5HDJ9
contig_1	Pyrodigal	gene	2480513	2480968	.	-	.	ID=GCA000560365_02462_gene;locus_tag=GCA000560365_02462;gene=tcaR
contig_1	Pyrodigal	CDS	2480513	2480968	.	-	0	ID=GCA000560365_02462;Name=HTH-type transcriptional regulator TcaR;locus_tag=GCA000560365_02462;product=HTH-type transcriptional regulator TcaR;Dbxref=GO:0003677,GO:0003700,GO:0006950;gene=tcaR;Parent=GCA000560365_02462_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1846,COG:K,KEGG:K21454,RefSeq:WP_000238542.1,SO:0001217,UniParc:UPI00000D778A,UniRef:UniRef100_Q9F4G3,UniRef:UniRef50_Q9F4G3,UniRef:UniRef90_Q9F4G3
contig_1	Pyrodigal	gene	2481163	2482131	.	+	.	ID=GCA000560365_02463_gene;locus_tag=GCA000560365_02463;gene=elyC
contig_1	Pyrodigal	CDS	2481163	2482131	.	+	0	ID=GCA000560365_02463;Name=DUF218 domain-containing protein;locus_tag=GCA000560365_02463;product=DUF218 domain-containing protein;gene=elyC;Parent=GCA000560365_02463_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1434,COG:M,RefSeq:WP_001549718.1,SO:0001217,UniParc:UPI0000054A25,UniRef:UniRef100_Q2FVR4,UniRef:UniRef50_Q2FVR4,UniRef:UniRef90_Q2FVR4
contig_1	Infernal	gene	2482430	2482654	.	-	.	ID=GCA000560365_02464_gene;locus_tag=GCA000560365_02464;gene=tsr24
contig_1	Infernal	ncRNA	2482430	2482654	3.9e-08	-	.	ID=GCA000560365_02464;Name=S. aureus tsr24 small RNA;locus_tag=GCA000560365_02464;product=S. aureus tsr24 small RNA;Dbxref=RFAM:RF02577;Parent=GCA000560365_02464_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02577
contig_1	Pyrodigal	gene	2482706	2483062	.	+	.	ID=GCA000560365_02465_gene;locus_tag=GCA000560365_02465
contig_1	Pyrodigal	CDS	2482706	2483062	.	+	0	ID=GCA000560365_02465;Name=Truncated transposase;locus_tag=GCA000560365_02465;product=Truncated transposase;Parent=GCA000560365_02465_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000054A26,UniRef:UniRef100_Q2FVR2,UniRef:UniRef50_Q2FVR2,UniRef:UniRef90_Q2FVR2
contig_1	Pyrodigal	gene	2483202	2483867	.	-	.	ID=GCA000560365_02466_gene;locus_tag=GCA000560365_02466;gene=hrtA
contig_1	Pyrodigal	CDS	2483202	2483867	.	-	0	ID=GCA000560365_02466;Name=Putative hemin import ATP-binding protein HrtA;locus_tag=GCA000560365_02466;product=Putative hemin import ATP-binding protein HrtA;Dbxref=GO:0005524,GO:0005886,GO:0016887,GO:0022857;gene=hrtA;Parent=GCA000560365_02466_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1136,COG:M,RefSeq:WP_001229911.1,SO:0001217,UniParc:UPI0000054A27,UniRef:UniRef100_Q2FVR1,UniRef:UniRef50_Q99RR8,UniRef:UniRef90_Q99RR8;ec_number=7.6.2.-
contig_1	Pyrodigal	gene	2483867	2484922	.	-	.	ID=GCA000560365_02467_gene;locus_tag=GCA000560365_02467;gene=hrtB
contig_1	Pyrodigal	CDS	2483867	2484922	.	-	0	ID=GCA000560365_02467;Name=Putative hemin transport system permease protein HrtB;locus_tag=GCA000560365_02467;product=Putative hemin transport system permease protein HrtB;Dbxref=GO:0005886;gene=hrtB;Parent=GCA000560365_02467_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K09813,RefSeq:WP_000761395.1,SO:0001217,UniParc:UPI00000D769C,UniRef:UniRef100_Q2FVR0,UniRef:UniRef50_Q2FVR0,UniRef:UniRef90_Q2FVR0
contig_1	Pyrodigal	gene	2485058	2485732	.	+	.	ID=GCA000560365_02468_gene;locus_tag=GCA000560365_02468;gene=hssR
contig_1	Pyrodigal	CDS	2485058	2485732	.	+	0	ID=GCA000560365_02468;Name=DNA-binding heme response regulator HssR;locus_tag=GCA000560365_02468;product=DNA-binding heme response regulator HssR;Dbxref=GO:0000156,GO:0000976,GO:0005829,GO:0006355,GO:0032993;gene=hssR;Parent=GCA000560365_02468_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000249498,COG:COG0745,COG:TK,RefSeq:WP_000249497.1,SO:0001217,UniParc:UPI00000D76A0,UniRef:UniRef100_Q2FVQ9,UniRef:UniRef50_Q2FVQ9,UniRef:UniRef90_Q2FVQ9
contig_1	Pyrodigal	gene	2485725	2487098	.	+	.	ID=GCA000560365_02469_gene;locus_tag=GCA000560365_02469;gene=hssS
contig_1	Pyrodigal	CDS	2485725	2487098	.	+	0	ID=GCA000560365_02469;Name=heme sensor histidine kinase HssS;locus_tag=GCA000560365_02469;product=heme sensor histidine kinase HssS;Dbxref=GO:0000155,GO:0005524,GO:0005886;gene=hssS;Parent=GCA000560365_02469_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000477337,COG:COG0642,COG:T,RefSeq:WP_000477329.1,SO:0001217,UniParc:UPI0000054A2C,UniRef:UniRef100_Q2FVQ8,UniRef:UniRef50_Q2FVQ8,UniRef:UniRef90_Q2FVQ8;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	2487261	2487704	.	+	.	ID=GCA000560365_02470_gene;locus_tag=GCA000560365_02470;gene=lytTR
contig_1	Pyrodigal	CDS	2487261	2487704	.	+	0	ID=GCA000560365_02470;Name=putative HTH-type transcriptional regulator MW2284;locus_tag=GCA000560365_02470;product=putative HTH-type transcriptional regulator MW2284;Dbxref=GO:0000156,GO:0003677,GO:0005737;gene=lytTR;Parent=GCA000560365_02470_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3289,COG:K,RefSeq:WP_000977037.1,SO:0001217,UniParc:UPI0000054A2D,UniRef:UniRef100_Q2FVQ7,UniRef:UniRef50_Q2FVQ7,UniRef:UniRef90_Q2FVQ7
contig_1	Pyrodigal	gene	2487701	2488156	.	+	.	ID=GCA000560365_02471_gene;locus_tag=GCA000560365_02471
contig_1	Pyrodigal	CDS	2487701	2488156	.	+	0	ID=GCA000560365_02471;Name=DUF3021 domain-containing protein;locus_tag=GCA000560365_02471;product=DUF3021 domain-containing protein;Parent=GCA000560365_02471_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000793169.1,SO:0001217,UniParc:UPI0000054A2E,UniRef:UniRef100_Q2FVQ6,UniRef:UniRef50_Q2FVQ6,UniRef:UniRef90_Q2FVQ6
contig_1	Pyrodigal	gene	2488222	2489700	.	-	.	ID=GCA000560365_02472_gene;locus_tag=GCA000560365_02472;gene=mqo
contig_1	Pyrodigal	CDS	2488222	2489700	.	-	0	ID=GCA000560365_02472;Name=malate dehydrogenase (quinone);locus_tag=GCA000560365_02472;product=malate dehydrogenase (quinone);Dbxref=GO:0006099,GO:0008924,GO:0047545;gene=mqo;Parent=GCA000560365_02472_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0579,COG:G,RefSeq:WP_000211359.1,SO:0001217,UniParc:UPI00004B5CB3,UniRef:UniRef100_Q5HDJ0,UniRef:UniRef50_C5DAE0,UniRef:UniRef90_P65421;ec_number=1.1.5.4
contig_1	Pyrodigal	gene	2490081	2491679	.	-	.	ID=GCA000560365_02473_gene;locus_tag=GCA000560365_02473;gene=lldP
contig_1	Pyrodigal	CDS	2490081	2491679	.	-	0	ID=GCA000560365_02473;Name=L-lactate permease;locus_tag=GCA000560365_02473;product=L-lactate permease;gene=lldP;Parent=GCA000560365_02473_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1620,RefSeq:WP_000960852.1,SO:0001217,UniParc:UPI0000696CCD,UniRef:UniRef100_A0A1S6C213,UniRef:UniRef50_Q9K5Z9,UniRef:UniRef90_A0A2X2JS03
contig_1	Pyrodigal	gene	2491996	2493669	.	+	.	ID=GCA000560365_02474_gene;locus_tag=GCA000560365_02474;gene=tagB
contig_1	Pyrodigal	CDS	2491996	2493669	.	+	0	ID=GCA000560365_02474;Name=CDP-glycerol glycerophosphotransferase family protein;locus_tag=GCA000560365_02474;product=CDP-glycerol glycerophosphotransferase family protein;gene=tagB;Parent=GCA000560365_02474_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1887,COG:MI,RefSeq:WP_000595298.1,SO:0001217,UniParc:UPI00004B5CB4,UniRef:UniRef100_Q2FVQ3,UniRef:UniRef50_Q2FVQ3,UniRef:UniRef90_Q2FVQ3
contig_1	Pyrodigal	gene	2493822	2494451	.	-	.	ID=GCA000560365_02475_gene;locus_tag=GCA000560365_02475
contig_1	Pyrodigal	CDS	2493822	2494451	.	-	0	ID=GCA000560365_02475;Name=putative lipoprotein SAV2368;locus_tag=GCA000560365_02475;product=putative lipoprotein SAV2368;Dbxref=GO:0005886;Parent=GCA000560365_02475_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000827000.1,SO:0001217,UniParc:UPI0000054A31,UniRef:UniRef100_Q2FVQ2,UniRef:UniRef50_Q2FVQ2,UniRef:UniRef90_Q2FVQ2
contig_1	Pyrodigal	gene	2494765	2495280	.	-	.	ID=GCA000560365_02476_gene;locus_tag=GCA000560365_02476;gene=rimI
contig_1	Pyrodigal	CDS	2494765	2495280	.	-	0	ID=GCA000560365_02476;Name=Protease synthase and sporulation negative regulatory protein PAI 1;locus_tag=GCA000560365_02476;product=Protease synthase and sporulation negative regulatory protein PAI 1;gene=rimI;Parent=GCA000560365_02476_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0456,COG:J,RefSeq:WP_000907311.1,SO:0001217,UniParc:UPI0000054A32,UniRef:UniRef100_Q2FVQ1,UniRef:UniRef50_A0A0U1MSC1,UniRef:UniRef90_A0A0U1MSC1
contig_1	Pyrodigal	gene	2495471	2496475	.	+	.	ID=GCA000560365_02477_gene;locus_tag=GCA000560365_02477;gene=qor
contig_1	Pyrodigal	CDS	2495471	2496475	.	+	0	ID=GCA000560365_02477;Name=Acryloyl-CoA reductase;locus_tag=GCA000560365_02477;product=Acryloyl-CoA reductase;gene=qor;Parent=GCA000560365_02477_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0604,COG:CR,RefSeq:WP_000573242.1,SO:0001217,UniParc:UPI00000D9F96,UniRef:UniRef100_A0A2Y1TSU4,UniRef:UniRef50_A0A2Y1TSU4,UniRef:UniRef90_A0A2Y1TSU4
contig_1	Pyrodigal	gene	2496521	2496856	.	-	.	ID=GCA000560365_02478_gene;locus_tag=GCA000560365_02478
contig_1	Pyrodigal	CDS	2496521	2496856	.	-	0	ID=GCA000560365_02478;Name=N-acetyltransferase domain-containing protein;locus_tag=GCA000560365_02478;product=N-acetyltransferase domain-containing protein;Parent=GCA000560365_02478_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001549720.1,SO:0001217,UniParc:UPI000069AB58,UniRef:UniRef100_Q2FVP9,UniRef:UniRef50_Q2FVP9,UniRef:UniRef90_Q2FVP9
contig_1	Pyrodigal	gene	2496958	2497992	.	-	.	ID=GCA000560365_02479_gene;locus_tag=GCA000560365_02479
contig_1	Pyrodigal	CDS	2496958	2497992	.	-	0	ID=GCA000560365_02479;Name=Ferredoxin--NADP reductase;locus_tag=GCA000560365_02479;product=Ferredoxin--NADP reductase;Dbxref=GO:0004324,GO:0050660,GO:0050661;Parent=GCA000560365_02479_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K21567,RefSeq:WP_000655971.1,SO:0001217,UniParc:UPI00004B5CB5,UniRef:UniRef100_Q2FVP8,UniRef:UniRef50_Q2FVP8,UniRef:UniRef90_Q2FVP8;ec_number=1.18.1.2
contig_1	Pyrodigal	gene	2498224	2498655	.	-	.	ID=GCA000560365_02480_gene;locus_tag=GCA000560365_02480
contig_1	Pyrodigal	CDS	2498224	2498655	.	-	0	ID=GCA000560365_02480;Name=DUF2871 domain-containing protein;locus_tag=GCA000560365_02480;product=DUF2871 domain-containing protein;Parent=GCA000560365_02480_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001253464.1,SO:0001217,UniParc:UPI0000054A38,UniRef:UniRef100_Q2FVP6,UniRef:UniRef50_Q2FVP6,UniRef:UniRef90_Q2FVP6
contig_1	Pyrodigal	gene	2498862	2500139	.	-	.	ID=GCA000560365_02481_gene;locus_tag=GCA000560365_02481;gene=yhgE
contig_1	Pyrodigal	CDS	2498862	2500139	.	-	0	ID=GCA000560365_02481;Name=Membrane protein%2C putative;locus_tag=GCA000560365_02481;product=Membrane protein%2C putative;gene=yhgE;Parent=GCA000560365_02481_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1511,COG:S,KEGG:K01421,RefSeq:WP_001020023.1,SO:0001217,UniParc:UPI00004B5CB7,UniRef:UniRef100_Q2FVP4,UniRef:UniRef50_B9DJT1,UniRef:UniRef90_Q2FVP4
contig_1	Pyrodigal	gene	2500300	2500923	.	+	.	ID=GCA000560365_02482_gene;locus_tag=GCA000560365_02482;gene=acrR
contig_1	Pyrodigal	CDS	2500300	2500923	.	+	0	ID=GCA000560365_02482;Name=HTH tetR-type domain-containing protein;locus_tag=GCA000560365_02482;product=HTH tetR-type domain-containing protein;gene=acrR;Parent=GCA000560365_02482_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1309,COG:K,RefSeq:WP_000656771.1,SO:0001217,UniParc:UPI00000D76B8,UniRef:UniRef100_Q2FVP3,UniRef:UniRef50_Q2FVP3,UniRef:UniRef90_Q2FVP3
contig_1	Pyrodigal	gene	2500969	2501913	.	+	.	ID=GCA000560365_02483_gene;locus_tag=GCA000560365_02483;gene=corA
contig_1	Pyrodigal	CDS	2500969	2501913	.	+	0	ID=GCA000560365_02483;Name=Magnesium transporter CorA family protein;locus_tag=GCA000560365_02483;product=Magnesium transporter CorA family protein;gene=corA;Parent=GCA000560365_02483_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0598,COG:P,RefSeq:WP_000633068.1,SO:0001217,UniParc:UPI0000054A3C,UniRef:UniRef100_Q2FVP2,UniRef:UniRef50_Q2FVP2,UniRef:UniRef90_Q2FVP2
contig_1	Pyrodigal	gene	2501999	2503441	.	-	.	ID=GCA000560365_02484_gene;locus_tag=GCA000560365_02484;gene=ptsG2
contig_1	Pyrodigal	CDS	2501999	2503441	.	-	0	ID=GCA000560365_02484;Name=protein-N(pi)-phosphohistidine--sucrose phosphotransferase;locus_tag=GCA000560365_02484;product=protein-N(pi)-phosphohistidine--sucrose phosphotransferase;gene=ptsG2;Parent=GCA000560365_02484_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1264,COG:G,RefSeq:WP_001108126.1,SO:0001217,UniParc:UPI00000D9F9A,UniRef:UniRef100_A0A0D6H1J5,UniRef:UniRef50_P51184,UniRef:UniRef90_A0A7U7JRC9
contig_1	Pyrodigal	gene	2503624	2504007	.	+	.	ID=GCA000560365_02485_gene;locus_tag=GCA000560365_02485
contig_1	Pyrodigal	CDS	2503624	2504007	.	+	0	ID=GCA000560365_02485;Name=DUF1722 domain-containing protein;locus_tag=GCA000560365_02485;product=DUF1722 domain-containing protein;Parent=GCA000560365_02485_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000664394.1,SO:0001217,UniParc:UPI00004B5CB8,UniRef:UniRef100_A0A0D3QAR4,UniRef:UniRef50_A0A0H3JX25,UniRef:UniRef90_A0A0H3JX25
contig_1	Pyrodigal	gene	2505495	2507600	.	+	.	ID=GCA000560365_02486_gene;locus_tag=GCA000560365_02486;gene=rsp
contig_1	Pyrodigal	CDS	2505495	2507600	.	+	0	ID=GCA000560365_02486;Name=AraC family transcriptional regulator Rsp;locus_tag=GCA000560365_02486;product=AraC family transcriptional regulator Rsp;Dbxref=GO:0003700,GO:0006355,GO:0043565;gene=rsp;Parent=GCA000560365_02486_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2207,COG:K,RefSeq:WP_000128366.1,SO:0001217,UniParc:UPI000005456E,UniRef:UniRef100_Q2FVN8,UniRef:UniRef50_A0A0U1MT29,UniRef:UniRef90_A0A0U1MT29
contig_1	Pyrodigal	gene	2507671	2508093	.	+	.	ID=GCA000560365_02487_gene;locus_tag=GCA000560365_02487;gene=yzzA
contig_1	Pyrodigal	CDS	2507671	2508093	.	+	0	ID=GCA000560365_02487;Name=Pyridoxamine 5'-phosphate oxidase N-terminal domain-containing protein;locus_tag=GCA000560365_02487;product=Pyridoxamine 5'-phosphate oxidase N-terminal domain-containing protein;gene=yzzA;Parent=GCA000560365_02487_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3871,COG:S,RefSeq:WP_000071901.1,SO:0001217,UniParc:UPI00004B5CB9,UniRef:UniRef100_X5EGR8,UniRef:UniRef50_Q2FVN7,UniRef:UniRef90_Q2FVN7
contig_1	Pyrodigal	gene	2508358	2508714	.	+	.	ID=GCA000560365_02488_gene;locus_tag=GCA000560365_02488
contig_1	Pyrodigal	CDS	2508358	2508714	.	+	0	ID=GCA000560365_02488;Name=DUF4889 domain-containing protein;locus_tag=GCA000560365_02488;product=DUF4889 domain-containing protein;Parent=GCA000560365_02488_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000727328.1,SO:0001217,UniParc:UPI0000054640,UniRef:UniRef100_Q2FVN6,UniRef:UniRef50_Q2FVN6,UniRef:UniRef90_Q2FVN6
contig_1	Pyrodigal	gene	2509118	2510395	.	-	.	ID=GCA000560365_02489_gene;locus_tag=GCA000560365_02489;gene=gltP
contig_1	Pyrodigal	CDS	2509118	2510395	.	-	0	ID=GCA000560365_02489;Name=Cation:dicarboxylase symporter family transporter;locus_tag=GCA000560365_02489;product=Cation:dicarboxylase symporter family transporter;gene=gltP;Parent=GCA000560365_02489_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1301,KEGG:K11102,RefSeq:WP_001173165.1,SO:0001217,UniParc:UPI00000D7873,UniRef:UniRef100_Q2FVN5,UniRef:UniRef50_Q2FVN5,UniRef:UniRef90_Q2FVN5
contig_1	Pyrodigal	gene	2510577	2510942	.	-	.	ID=GCA000560365_02490_gene;locus_tag=GCA000560365_02490
contig_1	Pyrodigal	CDS	2510577	2510942	.	-	0	ID=GCA000560365_02490;Name=DUF3139 domain-containing protein;locus_tag=GCA000560365_02490;product=DUF3139 domain-containing protein;Parent=GCA000560365_02490_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000727537.1,SO:0001217,UniParc:UPI0000054770,UniRef:UniRef100_Q2FVN4,UniRef:UniRef50_Q2FVN4,UniRef:UniRef90_Q2FVN4
contig_1	Pyrodigal	gene	2511340	2511786	.	+	.	ID=GCA000560365_02491_gene;locus_tag=GCA000560365_02491;gene=sarZ
contig_1	Pyrodigal	CDS	2511340	2511786	.	+	0	ID=GCA000560365_02491;Name=HTH-type transcriptional regulator SarZ;locus_tag=GCA000560365_02491;product=HTH-type transcriptional regulator SarZ;Dbxref=GO:0003677,GO:0003700,GO:0005737;gene=sarZ;Parent=GCA000560365_02491_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1846,COG:K,RefSeq:WP_000289213.1,SO:0001217,UniParc:UPI00000D9F9D,UniRef:UniRef100_Q2FVN3,UniRef:UniRef50_Q2FVN3,UniRef:UniRef90_Q2FVN3
contig_1	Pyrodigal	gene	2512008	2512430	.	+	.	ID=GCA000560365_02492_gene;locus_tag=GCA000560365_02492
contig_1	Pyrodigal	CDS	2512008	2512430	.	+	0	ID=GCA000560365_02492;Name=Crystallin;locus_tag=GCA000560365_02492;product=Crystallin;Parent=GCA000560365_02492_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_Q2FVN2,UniRef:UniRef90_A0A0D1IXM8
contig_1	Pyrodigal	gene	2512537	2513706	.	-	.	ID=GCA000560365_02493_gene;locus_tag=GCA000560365_02493;gene=narT
contig_1	Pyrodigal	CDS	2512537	2513706	.	-	0	ID=GCA000560365_02493;Name=putative nitrate transporter NarT;locus_tag=GCA000560365_02493;product=putative nitrate transporter NarT;Dbxref=GO:0005886,GO:0015112,GO:0042128;gene=narT;Parent=GCA000560365_02493_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2223,COG:P,KEGG:K10850,RefSeq:WP_000278558.1,SO:0001217,UniParc:UPI00000D9F9E,UniRef:UniRef100_Q2FVN1,UniRef:UniRef50_Q2FVN1,UniRef:UniRef90_Q2FVN1
contig_1	Pyrodigal	gene	2514076	2514714	.	+	.	ID=GCA000560365_02494_gene;locus_tag=GCA000560365_02494;gene=yjaZ
contig_1	Pyrodigal	CDS	2514076	2514714	.	+	0	ID=GCA000560365_02494;Name=DUF2268 domain-containing protein;locus_tag=GCA000560365_02494;product=DUF2268 domain-containing protein;gene=yjaZ;Parent=GCA000560365_02494_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5504,COG:R,SO:0001217,UniParc:UPI0000054B83,UniRef:UniRef100_Q2FVN0,UniRef:UniRef50_Q2FVM9,UniRef:UniRef90_Q2FVN0
contig_1	Pyrodigal	gene	2514784	2514990	.	+	.	ID=GCA000560365_02495_gene;locus_tag=GCA000560365_02495;gene=yjaZ
contig_1	Pyrodigal	CDS	2514784	2514990	.	+	0	ID=GCA000560365_02495;Name=DUF2268 domain-containing protein;locus_tag=GCA000560365_02495;product=DUF2268 domain-containing protein;gene=yjaZ;Parent=GCA000560365_02495_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5504,COG:R,SO:0001217,UniParc:UPI0000054B84,UniRef:UniRef100_Q2FVM9,UniRef:UniRef50_Q2FVM9,UniRef:UniRef90_Q2FVN0
contig_1	Pyrodigal	gene	2514969	2515709	.	+	.	ID=GCA000560365_02496_gene;locus_tag=GCA000560365_02496;gene=soxR
contig_1	Pyrodigal	CDS	2514969	2515709	.	+	0	ID=GCA000560365_02496;Name=HTH merR-type domain-containing protein;locus_tag=GCA000560365_02496;product=HTH merR-type domain-containing protein;gene=soxR;Parent=GCA000560365_02496_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0789,COG:K,RefSeq:WP_000332063.1,SO:0001217,UniParc:UPI00000522A1,UniRef:UniRef100_Q2FVM8,UniRef:UniRef50_Q2FVM8,UniRef:UniRef90_Q2FVM8
contig_1	Pyrodigal	gene	2515967	2516620	.	-	.	ID=GCA000560365_02497_gene;locus_tag=GCA000560365_02497;gene=nreC
contig_1	Pyrodigal	CDS	2515967	2516620	.	-	0	ID=GCA000560365_02497;Name=nitrate respiration regulation response regulator NreC;locus_tag=GCA000560365_02497;product=nitrate respiration regulation response regulator NreC;Dbxref=GO:0000160,GO:0003677,GO:0005737,GO:0006355;gene=nreC;Parent=GCA000560365_02497_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_015901130,BlastRules:WP_016911488,COG:COG2197,COG:TK,RefSeq:WP_000706315.1,SO:0001217,UniParc:UPI00000D7876,UniRef:UniRef100_Q2FVM7,UniRef:UniRef50_Q7WZY4,UniRef:UniRef90_Q2FVM7
contig_1	Pyrodigal	gene	2516643	2517677	.	-	.	ID=GCA000560365_02498_gene;locus_tag=GCA000560365_02498;gene=nreB
contig_1	Pyrodigal	CDS	2516643	2517677	.	-	0	ID=GCA000560365_02498;Name=nitrate respiration regulation sensor histidine kinase NreB;locus_tag=GCA000560365_02498;product=nitrate respiration regulation sensor histidine kinase NreB;Dbxref=GO:0000155,GO:0005506,GO:0005524,GO:0005737,GO:0016020,GO:0046983,GO:0051539;gene=nreB;Parent=GCA000560365_02498_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000606551,BlastRules:WP_011274984,BlastRules:WP_015901131,COG:COG4585,COG:T,KEGG:K07683,RefSeq:WP_000606546.1,SO:0001217,UniParc:UPI0000054B87,UniRef:UniRef100_Q2FVM6,UniRef:UniRef50_Q7WZY5,UniRef:UniRef90_Q2FVM6;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	2517701	2518153	.	-	.	ID=GCA000560365_02499_gene;locus_tag=GCA000560365_02499;gene=nreA
contig_1	Pyrodigal	CDS	2517701	2518153	.	-	0	ID=GCA000560365_02499;Name=nitrate respiration regulation accessory nitrate sensor NreA;locus_tag=GCA000560365_02499;product=nitrate respiration regulation accessory nitrate sensor NreA;gene=nreA;Parent=GCA000560365_02499_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2203,COG:T,KEGG:K10851,RefSeq:WP_000186933.1,SO:0001217,UniParc:UPI00000D764F,UniRef:UniRef100_Q2FVM5,UniRef:UniRef50_Q2FVM5,UniRef:UniRef90_Q2FVM5
contig_1	Pyrodigal	gene	2518173	2518850	.	-	.	ID=GCA000560365_02500_gene;locus_tag=GCA000560365_02500;gene=narI
contig_1	Pyrodigal	CDS	2518173	2518850	.	-	0	ID=GCA000560365_02500;Name=respiratory nitrate reductase subunit gamma;locus_tag=GCA000560365_02500;product=respiratory nitrate reductase subunit gamma;Dbxref=GO:0008940,GO:0009325,GO:0019645;gene=narI;Parent=GCA000560365_02500_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2181,COG:CP,RefSeq:WP_000934151.1,SO:0001217,UniParc:UPI0000054B8A,UniRef:UniRef100_Q2FVM4,UniRef:UniRef50_A0A7U7PWT4,UniRef:UniRef90_A0A7U7PWT4;ec_number=1.7.99.4
contig_1	Pyrodigal	gene	2518843	2519418	.	-	.	ID=GCA000560365_02501_gene;locus_tag=GCA000560365_02501;gene=narJ
contig_1	Pyrodigal	CDS	2518843	2519418	.	-	0	ID=GCA000560365_02501;Name=nitrate reductase molybdenum cofactor assembly chaperone;locus_tag=GCA000560365_02501;product=nitrate reductase molybdenum cofactor assembly chaperone;Dbxref=GO:0051082,GO:0051131;gene=narJ;Parent=GCA000560365_02501_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2180,COG:CPO,KEGG:K00373,RefSeq:WP_000606768.1,SO:0001217,UniParc:UPI00000CA9C7,UniRef:UniRef100_W8TTV0,UniRef:UniRef50_A0A0D0RML2,UniRef:UniRef90_W8TTV0
contig_1	Pyrodigal	gene	2519411	2520970	.	-	.	ID=GCA000560365_02502_gene;locus_tag=GCA000560365_02502;gene=narH
contig_1	Pyrodigal	CDS	2519411	2520970	.	-	0	ID=GCA000560365_02502;Name=nitrate reductase subunit beta;locus_tag=GCA000560365_02502;product=nitrate reductase subunit beta;Dbxref=GO:0008940,GO:0009325,GO:0042126;gene=narH;Parent=GCA000560365_02502_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1140,COG:CP,KEGG:K00371,RefSeq:WP_000692645.1,SO:0001217,UniParc:UPI00000D9FA4,UniRef:UniRef100_Q2FVM2,UniRef:UniRef50_P11349,UniRef:UniRef90_A0A0U1MSV9;ec_number=1.7.99.4
contig_1	Pyrodigal	gene	2520960	2524649	.	-	.	ID=GCA000560365_02503_gene;locus_tag=GCA000560365_02503;gene=narG
contig_1	Pyrodigal	CDS	2520960	2524649	.	-	0	ID=GCA000560365_02503;Name=nitrate reductase subunit alpha;locus_tag=GCA000560365_02503;product=nitrate reductase subunit alpha;Dbxref=GO:0008940,GO:0009325,GO:0042126;gene=narG;Parent=GCA000560365_02503_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5013,COG:CP,KEGG:K00370,RefSeq:WP_000514391.1,SO:0001217,UniParc:UPI0000054B8D,UniRef:UniRef100_Q2FVM1,UniRef:UniRef50_A0A127FDB7,UniRef:UniRef90_A0A2S6DTK4;ec_number=1.7.99.4
contig_1	Pyrodigal	gene	2524958	2525935	.	-	.	ID=GCA000560365_02504_gene;locus_tag=GCA000560365_02504;gene=cysG
contig_1	Pyrodigal	CDS	2524958	2525935	.	-	0	ID=GCA000560365_02504;Name=uroporphyrinogen-III C-methyltransferase;locus_tag=GCA000560365_02504;product=uroporphyrinogen-III C-methyltransferase;gene=cysG;Parent=GCA000560365_02504_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0007,COG:H,RefSeq:WP_000109968.1,SO:0001217,UniParc:UPI00004B5CBD,UniRef:UniRef100_A0A0E7VD74,UniRef:UniRef50_A0A3A5LVF3,UniRef:UniRef90_A0A3A5LVF3
contig_1	Pyrodigal	gene	2525926	2526240	.	-	.	ID=GCA000560365_02505_gene;locus_tag=GCA000560365_02505;gene=nirD
contig_1	Pyrodigal	CDS	2525926	2526240	.	-	0	ID=GCA000560365_02505;Name=Nitrite reductase (NAD(P)H) small subunit;locus_tag=GCA000560365_02505;product=Nitrite reductase (NAD(P)H) small subunit;gene=nirD;Parent=GCA000560365_02505_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2146,COG:PQ,KEGG:K26138,RefSeq:WP_000448222.1,SO:0001217,UniParc:UPI0000054B8F,UniRef:UniRef100_Q2FVL9,UniRef:UniRef50_A0A3A3AHT4,UniRef:UniRef90_A0A3A3AHT4;ec_number=1.7.1.4
contig_1	Pyrodigal	gene	2526244	2528649	.	-	.	ID=GCA000560365_02506_gene;locus_tag=GCA000560365_02506;gene=nirB
contig_1	Pyrodigal	CDS	2526244	2528649	.	-	0	ID=GCA000560365_02506;Name=NAD(P)/FAD-dependent oxidoreductase;locus_tag=GCA000560365_02506;product=NAD(P)/FAD-dependent oxidoreductase;gene=nirB;Parent=GCA000560365_02506_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1251,RefSeq:WP_001118736.1,SO:0001217,UniParc:UPI0000696CD1,UniRef:UniRef100_A0A0E8HHC4,UniRef:UniRef50_A0A380G539,UniRef:UniRef90_A0A3M9GSL0
contig_1	Pyrodigal	gene	2528715	2529446	.	-	.	ID=GCA000560365_02507_gene;locus_tag=GCA000560365_02507;gene=sirB
contig_1	Pyrodigal	CDS	2528715	2529446	.	-	0	ID=GCA000560365_02507;Name=Sirohydrochlorin chelatase;locus_tag=GCA000560365_02507;product=Sirohydrochlorin chelatase;gene=sirB;Parent=GCA000560365_02507_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2138,COG:H,RefSeq:WP_001014062.1,SO:0001217,UniParc:UPI00004B5CBE,UniRef:UniRef100_Q2G1V2,UniRef:UniRef50_Q2G1V2,UniRef:UniRef90_Q2G1V2
contig_1	Pyrodigal	gene	2529676	2530212	.	-	.	ID=GCA000560365_02508_gene;locus_tag=GCA000560365_02508;gene=yhbS
contig_1	Pyrodigal	CDS	2529676	2530212	.	-	0	ID=GCA000560365_02508;Name=N-acetyltransferase domain-containing protein;locus_tag=GCA000560365_02508;product=N-acetyltransferase domain-containing protein;gene=yhbS;Parent=GCA000560365_02508_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3153,COG:R,KEGG:K00680,RefSeq:WP_000169317.1,SO:0001217,UniParc:UPI00000CAC8F,UniRef:UniRef100_W8U3H5,UniRef:UniRef50_Q2G1V1,UniRef:UniRef90_Q2G1V1;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	2530445	2531269	.	-	.	ID=GCA000560365_02509_gene;locus_tag=GCA000560365_02509;gene=focA
contig_1	Pyrodigal	CDS	2530445	2531269	.	-	0	ID=GCA000560365_02509;Name=Formate/nitrite transporter%2C putative;locus_tag=GCA000560365_02509;product=Formate/nitrite transporter%2C putative;gene=focA;Parent=GCA000560365_02509_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2116,COG:P,RefSeq:WP_000572040.1,SO:0001217,UniParc:UPI00000D9FAA,UniRef:UniRef100_Q2G1V0,UniRef:UniRef50_Q2G1V0,UniRef:UniRef90_Q2G1V0
contig_1	Pyrodigal	gene	2531486	2531668	.	-	.	ID=GCA000560365_02510_gene;locus_tag=GCA000560365_02510
contig_1	Pyrodigal	CDS	2531486	2531668	.	-	0	ID=GCA000560365_02510;Name=hypothetical protein;locus_tag=GCA000560365_02510;product=hypothetical protein;Parent=GCA000560365_02510_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000230294.1,SO:0001217,UniParc:UPI00000D9FAB,UniRef:UniRef100_Q2G1U7,UniRef:UniRef50_Q2G1U7,UniRef:UniRef90_Q2G1U7
contig_1	Pyrodigal	gene	2531752	2532219	.	-	.	ID=GCA000560365_02511_gene;locus_tag=GCA000560365_02511;gene=yndB
contig_1	Pyrodigal	CDS	2531752	2532219	.	-	0	ID=GCA000560365_02511;Name=Activator of Hsp90 ATPase-like ue 1/2-like C-terminal domain-containing protein;locus_tag=GCA000560365_02511;product=Activator of Hsp90 ATPase-like ue 1/2-like C-terminal domain-containing protein;gene=yndB;Parent=GCA000560365_02511_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3832,COG:I,RefSeq:WP_000153344.1,SO:0001217,UniParc:UPI0000054B96,UniRef:UniRef100_Q2G1U9,UniRef:UniRef50_Q5HLI9,UniRef:UniRef90_Q2G1U9
contig_1	Pyrodigal	gene	2532405	2533955	.	-	.	ID=GCA000560365_02512_gene;locus_tag=GCA000560365_02512;gene=adcA
contig_1	Pyrodigal	CDS	2532405	2533955	.	-	0	ID=GCA000560365_02512;Name=zinc ABC transporter substrate-binding lipoprotein AdcA;locus_tag=GCA000560365_02512;product=zinc ABC transporter substrate-binding lipoprotein AdcA;gene=adcA;Parent=GCA000560365_02512_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3443,COG:P,RefSeq:WP_000727762.1,SO:0001217,UniParc:UPI00004B5CBF,UniRef:UniRef100_Q2G1U8,UniRef:UniRef50_A0A391LQP8,UniRef:UniRef90_A0A391LQP8
contig_1	Pyrodigal	gene	2534250	2534516	.	-	.	ID=GCA000560365_02513_gene;locus_tag=GCA000560365_02513
contig_1	Pyrodigal	CDS	2534250	2534516	.	-	0	ID=GCA000560365_02513;Name=Txe/YoeB family addiction module toxin;locus_tag=GCA000560365_02513;product=Txe/YoeB family addiction module toxin;Dbxref=GO:0008219;Parent=GCA000560365_02513_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4115,COG:V,RefSeq:WP_000113262.1,SO:0001217,UniParc:UPI0000054B98,UniRef:UniRef100_Q2G286,UniRef:UniRef50_A0A3A3ATA4,UniRef:UniRef90_A0A3A3ATA4
contig_1	Pyrodigal	gene	2534516	2534767	.	-	.	ID=GCA000560365_02514_gene;locus_tag=GCA000560365_02514;gene=stbD
contig_1	Pyrodigal	CDS	2534516	2534767	.	-	0	ID=GCA000560365_02514;Name=Antitoxin;locus_tag=GCA000560365_02514;product=Antitoxin;gene=stbD;Parent=GCA000560365_02514_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2161,COG:V,KEGG:K19159,RefSeq:WP_000584502.1,SO:0001217,UniParc:UPI0000696CD2,UniRef:UniRef100_A0A5A8VWS3,UniRef:UniRef50_Q5DWE0,UniRef:UniRef90_A0A077UKZ8
contig_1	Pyrodigal	gene	2535040	2535639	.	-	.	ID=GCA000560365_02515_gene;locus_tag=GCA000560365_02515;gene=dsbG
contig_1	Pyrodigal	CDS	2535040	2535639	.	-	0	ID=GCA000560365_02515;Name=Thioredoxin-like fold domain-containing protein;locus_tag=GCA000560365_02515;product=Thioredoxin-like fold domain-containing protein;gene=dsbG;Parent=GCA000560365_02515_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1651,COG:O,RefSeq:WP_000162813.1,SO:0001217,UniParc:UPI0000054B9A,UniRef:UniRef100_Q2FVL7,UniRef:UniRef50_A0AAP8PPS4,UniRef:UniRef90_Q2FVL7
contig_1	Pyrodigal	gene	2535658	2536017	.	-	.	ID=GCA000560365_02516_gene;locus_tag=GCA000560365_02516
contig_1	Pyrodigal	CDS	2535658	2536017	.	-	0	ID=GCA000560365_02516;Name=DUF4467 domain-containing protein;locus_tag=GCA000560365_02516;product=DUF4467 domain-containing protein;Parent=GCA000560365_02516_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000819847.1,SO:0001217,UniParc:UPI0001698BEA,UniRef:UniRef100_A0A1S5ZEY9,UniRef:UniRef50_A0A640MXZ4,UniRef:UniRef90_Q2FVL6
contig_1	Pyrodigal	gene	2536272	2537522	.	+	.	ID=GCA000560365_02517_gene;locus_tag=GCA000560365_02517;gene=fmhA
contig_1	Pyrodigal	CDS	2536272	2537522	.	+	0	ID=GCA000560365_02517;Name=FemA/FemB family glycyltransferase FmhA;locus_tag=GCA000560365_02517;product=FemA/FemB family glycyltransferase FmhA;gene=fmhA;Parent=GCA000560365_02517_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001012222,COG:COG2348,COG:M,RefSeq:WP_001012222.1,SO:0001217,UniParc:UPI0000054B9C,UniRef:UniRef100_Q2FVL5,UniRef:UniRef50_B9DMC1,UniRef:UniRef90_Q9X4D6
contig_1	Pyrodigal	gene	2537619	2538350	.	-	.	ID=GCA000560365_02518_gene;locus_tag=GCA000560365_02518;gene=glnQ
contig_1	Pyrodigal	CDS	2537619	2538350	.	-	0	ID=GCA000560365_02518;Name=Amino acid ABC transporter%2C ATP-binding protein;locus_tag=GCA000560365_02518;product=Amino acid ABC transporter%2C ATP-binding protein;gene=glnQ;Parent=GCA000560365_02518_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1126,COG:E,RefSeq:WP_000615461.1,SO:0001217,UniParc:UPI0000054B9D,UniRef:UniRef100_Q2FVL4,UniRef:UniRef50_A0A564T2N1,UniRef:UniRef90_A0A0Z1CVJ0
contig_1	Pyrodigal	gene	2538347	2539075	.	-	.	ID=GCA000560365_02519_gene;locus_tag=GCA000560365_02519;gene=hisM
contig_1	Pyrodigal	CDS	2538347	2539075	.	-	0	ID=GCA000560365_02519;Name=Amino acid ABC transproter%2C permease protein%2C putative;locus_tag=GCA000560365_02519;product=Amino acid ABC transproter%2C permease protein%2C putative;gene=hisM;Parent=GCA000560365_02519_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0765,COG:E,SO:0001217,UniParc:UPI00004B5CC3,UniRef:UniRef100_Q2FVL3,UniRef:UniRef50_B9DL82,UniRef:UniRef90_Q2FVL3
contig_1	Pyrodigal	gene	2539047	2539826	.	-	.	ID=GCA000560365_02520_gene;locus_tag=GCA000560365_02520;gene=hisJ
contig_1	Pyrodigal	CDS	2539047	2539826	.	-	0	ID=GCA000560365_02520;Name=Amino acid ABC transporter substrate-binding protein;locus_tag=GCA000560365_02520;product=Amino acid ABC transporter substrate-binding protein;gene=hisJ;Parent=GCA000560365_02520_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0834,COG:ET,RefSeq:WP_000825929.1,SO:0001217,UniParc:UPI0000054BA0,UniRef:UniRef100_Q2FVL2,UniRef:UniRef50_B9DL83,UniRef:UniRef90_Q2FVL2
contig_1	Pyrodigal	gene	2539947	2541386	.	-	.	ID=GCA000560365_02521_gene;locus_tag=GCA000560365_02521;gene=mdeA
contig_1	Pyrodigal	CDS	2539947	2541386	.	-	0	ID=GCA000560365_02521;Name=multidrug efflux MFS transporter MdeA;locus_tag=GCA000560365_02521;product=multidrug efflux MFS transporter MdeA;gene=mdeA;Parent=GCA000560365_02521_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000038968,COG:COG2814,COG:G,RefSeq:WP_000038961.1,SO:0001217,UniParc:UPI00015FD760,UniRef:UniRef100_A0A0D6H0H7,UniRef:UniRef50_A0A660A2M0,UniRef:UniRef90_A0A660A2M0
contig_1	Pyrodigal	gene	2541560	2541664	.	+	.	ID=GCA000560365_02522_gene;locus_tag=GCA000560365_02522
contig_1	Pyrodigal	CDS	2541560	2541664	.	+	0	ID=GCA000560365_02522;Name=Metal homeostasis protein;locus_tag=GCA000560365_02522;product=Metal homeostasis protein;Parent=GCA000560365_02522_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000762708.1,SO:0001217,UniParc:UPI0000054BA3,UniRef:UniRef100_Q2FVK9,UniRef:UniRef50_Q49ZZ1,UniRef:UniRef90_G5JKK3
contig_1	Pyrodigal	gene	2541818	2542504	.	-	.	ID=GCA000560365_02523_gene;locus_tag=GCA000560365_02523;gene=gpmA
contig_1	Pyrodigal	CDS	2541818	2542504	.	-	0	ID=GCA000560365_02523;Name=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;locus_tag=GCA000560365_02523;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;Dbxref=GO:0006094,GO:0006096,GO:0046538;gene=gpmA;Parent=GCA000560365_02523_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0588,COG:G,KEGG:K01834,RefSeq:WP_001125208.1,SO:0001217,UniParc:UPI0000054BA4,UniRef:UniRef100_Q2FVK8,UniRef:UniRef50_Q9CIM0,UniRef:UniRef90_Q2FVK8;ec_number=5.4.2.11
contig_1	Pyrodigal	gene	2542831	2543697	.	-	.	ID=GCA000560365_02524_gene;locus_tag=GCA000560365_02524;gene=fieF
contig_1	Pyrodigal	CDS	2542831	2543697	.	-	0	ID=GCA000560365_02524;Name=Cation efflux protein cytoplasmic domain-containing protein;locus_tag=GCA000560365_02524;product=Cation efflux protein cytoplasmic domain-containing protein;gene=fieF;Parent=GCA000560365_02524_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0053,COG:P,KEGG:K13283,RefSeq:WP_000019127.1,SO:0001217,UniParc:UPI00000D78A0,UniRef:UniRef100_Q2FVK7,UniRef:UniRef50_Q2FVK7,UniRef:UniRef90_Q2FVK7
contig_1	Pyrodigal	gene	2544449	2545759	.	+	.	ID=GCA000560365_02525_gene;locus_tag=GCA000560365_02525;gene=sbi
contig_1	Pyrodigal	CDS	2544449	2545759	.	+	0	ID=GCA000560365_02525;Name=immunoglobulin-binding protein Sbi;locus_tag=GCA000560365_02525;product=immunoglobulin-binding protein Sbi;Dbxref=GO:0005576,GO:0005886,GO:0019864;gene=sbi;Parent=GCA000560365_02525_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000792564,KEGG:K14197,RefSeq:WP_000792564.1,SO:0001217,UniParc:UPI0000052259,UniRef:UniRef100_Q2FVK5,UniRef:UniRef50_Q931F4,UniRef:UniRef90_Q931F4
contig_1	Pyrodigal	gene	2546259	2547224	.	+	.	ID=GCA000560365_02526_gene;locus_tag=GCA000560365_02526;gene=hlgA
contig_1	Pyrodigal	CDS	2546259	2547224	.	+	0	ID=GCA000560365_02526;Name=bi-component gamma-hemolysin HlgAB subunit A;locus_tag=GCA000560365_02526;product=bi-component gamma-hemolysin HlgAB subunit A;Dbxref=GO:0005576,GO:0051715,GO:0090729;gene=hlgA;Parent=GCA000560365_02526_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000594519,NCBIProtein:AUU54669.1,SO:0001217,UniParc:UPI0000054BA7,UniRef:UniRef100_Q5HDD6,UniRef:UniRef50_O54081,UniRef:UniRef90_Q5HDD6
contig_1	Pyrodigal	gene	2547791	2548738	.	+	.	ID=GCA000560365_02527_gene;locus_tag=GCA000560365_02527;gene=hlgC
contig_1	Pyrodigal	CDS	2547791	2548738	.	+	0	ID=GCA000560365_02527;Name=bi-component gamma-hemolysin HlgCB subunit C;locus_tag=GCA000560365_02527;product=bi-component gamma-hemolysin HlgCB subunit C;Dbxref=GO:0005576,GO:0051715,GO:0090729;gene=hlgC;Parent=GCA000560365_02527_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=NCBIProtein:CAA57277.1,RefSeq:WP_000916713.1,SO:0001217,UniParc:UPI000012C93F,UniRef:UniRef100_Q2FVK2,UniRef:UniRef50_O54081,UniRef:UniRef90_P31716,VFDB:VFC0235,VFDB:VFG001274
contig_1	Pyrodigal	gene	2548740	2549717	.	+	.	ID=GCA000560365_02528_gene;locus_tag=GCA000560365_02528;gene=hlgB
contig_1	Pyrodigal	CDS	2548740	2549717	.	+	0	ID=GCA000560365_02528;Name=bi-component gamma-hemolysin HlgAB/HlgCB subunit B;locus_tag=GCA000560365_02528;product=bi-component gamma-hemolysin HlgAB/HlgCB subunit B;Dbxref=GO:0005576,GO:0051715,GO:0090729;gene=hlgB;Parent=GCA000560365_02528_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=NCBIProtein:CAA57278.1,RefSeq:WP_000783428.1,SO:0001217,UniParc:UPI0000046EFC,UniRef:UniRef100_Q2FVK1,UniRef:UniRef50_Q2FVK1,UniRef:UniRef90_Q2FVK1,VFDB:VFC0235,VFDB:VFG001275
contig_1	Pyrodigal	gene	2549769	2550236	.	-	.	ID=GCA000560365_02529_gene;locus_tag=GCA000560365_02529;gene=queT
contig_1	Pyrodigal	CDS	2549769	2550236	.	-	0	ID=GCA000560365_02529;Name=QueT transporter family protein;locus_tag=GCA000560365_02529;product=QueT transporter family protein;gene=queT;Parent=GCA000560365_02529_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000200948.1,SO:0001217,UniParc:UPI0000696CD5,UniRef:UniRef100_Q2FVK0,UniRef:UniRef50_Q2FVK0,UniRef:UniRef90_Q2FVK0
contig_1	Pyrodigal	gene	2550247	2550939	.	-	.	ID=GCA000560365_02530_gene;locus_tag=GCA000560365_02530;gene=bioW
contig_1	Pyrodigal	CDS	2550247	2550939	.	-	0	ID=GCA000560365_02530;Name=6-carboxyhexanoate--CoA ligase;locus_tag=GCA000560365_02530;product=6-carboxyhexanoate--CoA ligase;Dbxref=GO:0000287,GO:0005524,GO:0009102,GO:0042410;gene=bioW;Parent=GCA000560365_02530_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1424,COG:H,KEGG:K01906,RefSeq:WP_000286875.1,SO:0001217,UniParc:UPI00000CAA5A,UniRef:UniRef100_Q2FVJ9,UniRef:UniRef50_Q2FVJ9,UniRef:UniRef90_Q2FVJ9;ec_number=6.2.1.14
contig_1	Pyrodigal	gene	2550950	2552065	.	-	.	ID=GCA000560365_02531_gene;locus_tag=GCA000560365_02531;gene=bioF
contig_1	Pyrodigal	CDS	2550950	2552065	.	-	0	ID=GCA000560365_02531;Name=8-amino-7-oxononanoate synthase;locus_tag=GCA000560365_02531;product=8-amino-7-oxononanoate synthase;gene=bioF;Parent=GCA000560365_02531_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0156,COG:H,RefSeq:WP_000671751.1,SO:0001217,UniParc:UPI00004B5CC6,UniRef:UniRef100_Q2FVJ8,UniRef:UniRef50_A0A2I7YAG2,UniRef:UniRef90_A0A2I7YAG2
contig_1	Pyrodigal	gene	2552043	2553050	.	-	.	ID=GCA000560365_02532_gene;locus_tag=GCA000560365_02532;gene=bioB
contig_1	Pyrodigal	CDS	2552043	2553050	.	-	0	ID=GCA000560365_02532;Name=biotin synthase BioB;locus_tag=GCA000560365_02532;product=biotin synthase BioB;Dbxref=GO:0004076,GO:0005506,GO:0009102,GO:0051536,GO:0051537,GO:0051539,GO:1904047;gene=bioB;Parent=GCA000560365_02532_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0502,COG:H,KEGG:K01012,RefSeq:WP_001046646.1,SO:0001217,UniParc:UPI0000054BAE,UniRef:UniRef100_Q2FVJ7,UniRef:UniRef50_Q81MB3,UniRef:UniRef90_Q2FVJ7;ec_number=2.8.1.6
contig_1	Pyrodigal	gene	2553052	2554410	.	-	.	ID=GCA000560365_02533_gene;locus_tag=GCA000560365_02533;gene=bioA
contig_1	Pyrodigal	CDS	2553052	2554410	.	-	0	ID=GCA000560365_02533;Name=adenosylmethionine--8-amino-7-oxononanoate transaminase;locus_tag=GCA000560365_02533;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;Dbxref=GO:0004015,GO:0005737,GO:0009102,GO:0030170;gene=bioA;Parent=GCA000560365_02533_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0161,COG:H,KEGG:K00833,RefSeq:WP_001110064.1,SO:0001217,UniParc:UPI0000054BAF,UniRef:UniRef100_Q2FVJ6,UniRef:UniRef50_Q2FVJ6,UniRef:UniRef90_Q2FVJ6;ec_number=2.6.1.62
contig_1	Pyrodigal	gene	2554388	2555074	.	-	.	ID=GCA000560365_02534_gene;locus_tag=GCA000560365_02534;gene=bioD
contig_1	Pyrodigal	CDS	2554388	2555074	.	-	0	ID=GCA000560365_02534;Name=dethiobiotin synthase;locus_tag=GCA000560365_02534;product=dethiobiotin synthase;Dbxref=GO:0000287,GO:0004141,GO:0005524,GO:0009102;gene=bioD;Parent=GCA000560365_02534_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0132,COG:H,KEGG:K01935,RefSeq:WP_001217917.1,SO:0001217,UniParc:UPI00004B5CC7,UniRef:UniRef100_Q2FVJ5,UniRef:UniRef50_Q5HKF0,UniRef:UniRef90_A0A3A5LQG2;ec_number=6.3.3.3
contig_1	Infernal	gene	2555174	2555460	.	+	.	ID=GCA000560365_02535_gene;locus_tag=GCA000560365_02535;gene=rsaJ
contig_1	Infernal	ncRNA	2555174	2555460	6.3e-46	+	.	ID=GCA000560365_02535;Name=RNA Staph. aureus A;locus_tag=GCA000560365_02535;gene=rsaJ;product=RNA Staph. aureus A;Dbxref=RFAM:RF01822;Parent=GCA000560365_02535_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01822
contig_1	Pyrodigal	gene	2555526	2557259	.	-	.	ID=GCA000560365_02536_gene;locus_tag=GCA000560365_02536;gene=mdlB
contig_1	Pyrodigal	CDS	2555526	2557259	.	-	0	ID=GCA000560365_02536;Name=ABC transporter ATP-binding protein;locus_tag=GCA000560365_02536;product=ABC transporter ATP-binding protein;gene=mdlB;Parent=GCA000560365_02536_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1132,COG:V,RefSeq:WP_000486494.1,SO:0001217,UniParc:UPI0000054BB1,UniRef:UniRef100_Q2FVJ2,UniRef:UniRef50_Q2FVJ2,UniRef:UniRef90_Q2FVJ2
contig_1	Pyrodigal	gene	2557284	2559047	.	-	.	ID=GCA000560365_02537_gene;locus_tag=GCA000560365_02537;gene=mdlB
contig_1	Pyrodigal	CDS	2557284	2559047	.	-	0	ID=GCA000560365_02537;Name=ABC transporter ATP-binding protein;locus_tag=GCA000560365_02537;product=ABC transporter ATP-binding protein;gene=mdlB;Parent=GCA000560365_02537_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1132,COG:V,RefSeq:WP_001064838.1,SO:0001217,UniParc:UPI00004B5CCA,UniRef:UniRef100_Q2FVJ1,UniRef:UniRef50_Q2FVJ1,UniRef:UniRef90_Q2FVJ1
contig_1	Infernal	gene	2559283	2559533	.	+	.	ID=GCA000560365_02538_gene;locus_tag=GCA000560365_02538;gene=S35
contig_1	Infernal	ncRNA	2559283	2559533	1.5e-10	+	.	ID=GCA000560365_02538;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000560365_02538;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000560365_02538_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Infernal	gene	2559643	2559739	.	+	.	ID=GCA000560365_02539_gene;locus_tag=GCA000560365_02539;gene=fstAT
contig_1	Infernal	ncRNA	2559643	2559739	3.6e-11	+	.	ID=GCA000560365_02539;Name=Fst antitoxin sRNA;locus_tag=GCA000560365_02539;product=Fst antitoxin sRNA;Dbxref=RFAM:RF01797;Parent=GCA000560365_02539_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01797
contig_1	Pyrodigal	gene	2559916	2560302	.	-	.	ID=GCA000560365_02540_gene;locus_tag=GCA000560365_02540;gene=gtxA
contig_1	Pyrodigal	CDS	2559916	2560302	.	-	0	ID=GCA000560365_02540;Name=flippase GtxA;locus_tag=GCA000560365_02540;product=flippase GtxA;gene=gtxA;Parent=GCA000560365_02540_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000779358,COG:COG2246,COG:I,RefSeq:WP_000779358.1,SO:0001217,UniParc:UPI0000054BB6,UniRef:UniRef100_Q2FVI8,UniRef:UniRef50_Q2FVI8,UniRef:UniRef90_Q2FVI8
contig_1	Pyrodigal	gene	2560570	2561712	.	+	.	ID=GCA000560365_02541_gene;locus_tag=GCA000560365_02541;gene=glxK
contig_1	Pyrodigal	CDS	2560570	2561712	.	+	0	ID=GCA000560365_02541;Name=Glycerate kinase;locus_tag=GCA000560365_02541;product=Glycerate kinase;gene=glxK;Parent=GCA000560365_02541_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1929,COG:G,KEGG:K00865,RefSeq:WP_001176863.1,SO:0001217,UniParc:UPI00000CAB7C,UniRef:UniRef100_Q2FVI7,UniRef:UniRef50_A0A0U1MSN1,UniRef:UniRef90_A0A0U1MSN1;ec_number=2.7.1.165
contig_1	Pyrodigal	gene	2561772	2562431	.	+	.	ID=GCA000560365_02542_gene;locus_tag=GCA000560365_02542
contig_1	Pyrodigal	CDS	2561772	2562431	.	+	0	ID=GCA000560365_02542;Name=hypothetical protein;locus_tag=GCA000560365_02542;product=hypothetical protein;Parent=GCA000560365_02542_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000831298.1,SO:0001217,UniParc:UPI00000CAD76,UniRef:UniRef100_Q2FVI6,UniRef:UniRef50_Q2FVI6,UniRef:UniRef90_Q2FVI6
contig_1	Pyrodigal	gene	2562613	2563824	.	+	.	ID=GCA000560365_02543_gene;locus_tag=GCA000560365_02543;gene=araJ
contig_1	Pyrodigal	CDS	2562613	2563824	.	+	0	ID=GCA000560365_02543;Name=Bcr/CflA family efflux transporter;locus_tag=GCA000560365_02543;product=Bcr/CflA family efflux transporter;gene=araJ;Parent=GCA000560365_02543_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2814,COG:G,KEGG:K07552,RefSeq:WP_001192075.1,SO:0001217,UniParc:UPI00000522E0,UniRef:UniRef100_Q2FVI5,UniRef:UniRef50_Q2FVI5,UniRef:UniRef90_Q2FVI5
contig_1	Pyrodigal	gene	2563947	2564420	.	-	.	ID=GCA000560365_02544_gene;locus_tag=GCA000560365_02544;gene=ydeE
contig_1	Pyrodigal	CDS	2563947	2564420	.	-	0	ID=GCA000560365_02544;Name=Bacterial transcription activator effector binding domain-containing protein;locus_tag=GCA000560365_02544;product=Bacterial transcription activator effector binding domain-containing protein;gene=ydeE;Parent=GCA000560365_02544_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3708,COG:K,RefSeq:WP_000456489.1,SO:0001217,UniParc:UPI0000054BB9,UniRef:UniRef100_Q2FVI4,UniRef:UniRef50_A0A7U7IFB2,UniRef:UniRef90_A0A7U7IFB2
contig_1	Pyrodigal	gene	2564533	2565189	.	+	.	ID=GCA000560365_02545_gene;locus_tag=GCA000560365_02545;gene=yvpB
contig_1	Pyrodigal	CDS	2564533	2565189	.	+	0	ID=GCA000560365_02545;Name=Peptidase C39-like domain-containing protein;locus_tag=GCA000560365_02545;product=Peptidase C39-like domain-containing protein;gene=yvpB;Parent=GCA000560365_02545_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4990,COG:R,RefSeq:WP_001080281.1,SO:0001217,UniParc:UPI00000D7887,UniRef:UniRef100_Q2FVI3,UniRef:UniRef50_Q2FVI3,UniRef:UniRef90_Q2FVI3
contig_1	Pyrodigal	gene	2565252	2566058	.	-	.	ID=GCA000560365_02546_gene;locus_tag=GCA000560365_02546;gene=cpdA
contig_1	Pyrodigal	CDS	2565252	2566058	.	-	0	ID=GCA000560365_02546;Name=Calcineurin-like phosphoesterase domain-containing protein;locus_tag=GCA000560365_02546;product=Calcineurin-like phosphoesterase domain-containing protein;gene=cpdA;Parent=GCA000560365_02546_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1409,COG:T,RefSeq:WP_000690197.1,SO:0001217,UniParc:UPI00004B5CCB,UniRef:UniRef100_Q2FVI2,UniRef:UniRef50_Q2FVI2,UniRef:UniRef90_Q2FVI2
contig_1	Pyrodigal	gene	2566344	2567753	.	+	.	ID=GCA000560365_02547_gene;locus_tag=GCA000560365_02547
contig_1	Pyrodigal	CDS	2566344	2567753	.	+	0	ID=GCA000560365_02547;Name=D-serine/D-alanine/glycine transporter;locus_tag=GCA000560365_02547;product=D-serine/D-alanine/glycine transporter;Parent=GCA000560365_02547_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000101538.1,SO:0001217,UniParc:UPI0000054BBC,UniRef:UniRef100_Q2FVI1,UniRef:UniRef50_Q2FXN2,UniRef:UniRef90_A0A077UKT4
contig_1	Pyrodigal	gene	2567891	2569969	.	+	.	ID=GCA000560365_02548_gene;locus_tag=GCA000560365_02548;gene=nhaP
contig_1	Pyrodigal	CDS	2567891	2569969	.	+	0	ID=GCA000560365_02548;Name=Cation/H+ exchanger transmembrane domain-containing protein;locus_tag=GCA000560365_02548;product=Cation/H+ exchanger transmembrane domain-containing protein;gene=nhaP;Parent=GCA000560365_02548_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0025,COG:P,KEGG:K24163,RefSeq:WP_001185692.1,SO:0001217,UniParc:UPI0000054BBE,UniRef:UniRef100_Q2FVI0,UniRef:UniRef50_Q2FVI0,UniRef:UniRef90_Q2FVI0
contig_1	Pyrodigal	gene	2570109	2571938	.	-	.	ID=GCA000560365_02549_gene;locus_tag=GCA000560365_02549
contig_1	Pyrodigal	CDS	2570109	2571938	.	-	0	ID=GCA000560365_02549;Name=Putative cyclic di-AMP transporter;locus_tag=GCA000560365_02549;product=Putative cyclic di-AMP transporter;Parent=GCA000560365_02549_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000483049.1,SO:0001217,UniParc:UPI0000054BC0,UniRef:UniRef100_Q2FVH8,UniRef:UniRef50_P96589,UniRef:UniRef90_A0A7U7PXE9
contig_1	Pyrodigal	gene	2572170	2573666	.	+	.	ID=GCA000560365_02550_gene;locus_tag=GCA000560365_02550;gene=flp
contig_1	Pyrodigal	CDS	2572170	2573666	.	+	0	ID=GCA000560365_02550;Name=Protein flp;locus_tag=GCA000560365_02550;product=Protein flp;Dbxref=GO:0005886;gene=flp;Parent=GCA000560365_02550_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1680,COG:V,RefSeq:WP_000208576.1,SO:0001217,UniParc:UPI0000696CD7,UniRef:UniRef100_A0A0E7QCY4,UniRef:UniRef50_Q2FVH6,UniRef:UniRef90_Q2FVH6
contig_1	Pyrodigal	gene	2573758	2574609	.	-	.	ID=GCA000560365_02551_gene;locus_tag=GCA000560365_02551;gene=wcaG
contig_1	Pyrodigal	CDS	2573758	2574609	.	-	0	ID=GCA000560365_02551;Name=MW2366 protein;locus_tag=GCA000560365_02551;product=MW2366 protein;gene=wcaG;Parent=GCA000560365_02551_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0451,COG:M,RefSeq:WP_000034507.1,SO:0001217,UniParc:UPI00004B5CCE,UniRef:UniRef100_Q2FVH5,UniRef:UniRef50_B9DIE7,UniRef:UniRef90_A0A0H3K1K1
contig_1	Pyrodigal	gene	2574931	2575866	.	-	.	ID=GCA000560365_02552_gene;locus_tag=GCA000560365_02552;gene=panE
contig_1	Pyrodigal	CDS	2574931	2575866	.	-	0	ID=GCA000560365_02552;Name=2-dehydropantoate 2-reductase;locus_tag=GCA000560365_02552;product=2-dehydropantoate 2-reductase;gene=panE;Parent=GCA000560365_02552_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1893,COG:H,RefSeq:WP_000684056.1,SO:0001217,UniParc:UPI0000054BC6,UniRef:UniRef100_Q2FVH3,UniRef:UniRef50_A0A0U1EBN6,UniRef:UniRef90_A0A2S6D1V7
contig_1	Pyrodigal	gene	2576092	2577492	.	-	.	ID=GCA000560365_02553_gene;locus_tag=GCA000560365_02553;gene=proP
contig_1	Pyrodigal	CDS	2576092	2577492	.	-	0	ID=GCA000560365_02553;Name=Quinolone resistance protein NorB;locus_tag=GCA000560365_02553;product=Quinolone resistance protein NorB;gene=proP;Parent=GCA000560365_02553_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0477,COG:GEPR,KEGG:K08170,RefSeq:WP_000381270.1,SO:0001217,UniParc:UPI0000054BC7,UniRef:UniRef100_Q2FVH2,UniRef:UniRef50_Q2FYJ5,UniRef:UniRef90_A0AAJ4YV50
contig_1	Pyrodigal	gene	2577786	2578481	.	-	.	ID=GCA000560365_02554_gene;locus_tag=GCA000560365_02554;gene=opuBB
contig_1	Pyrodigal	CDS	2577786	2578481	.	-	0	ID=GCA000560365_02554;Name=Glycine betaine/carnitine/choline/choline sulfate ABC transporter (Permease);locus_tag=GCA000560365_02554;product=Glycine betaine/carnitine/choline/choline sulfate ABC transporter (Permease);gene=opuBB;Parent=GCA000560365_02554_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1174,COG:E,RefSeq:WP_000398941.1,SO:0001217,UniParc:UPI0000054BC8,UniRef:UniRef100_Q2FVH1,UniRef:UniRef50_P39775,UniRef:UniRef90_A0A0U1MTP7
contig_1	Pyrodigal	gene	2578481	2579422	.	-	.	ID=GCA000560365_02555_gene;locus_tag=GCA000560365_02555;gene=osmF
contig_1	Pyrodigal	CDS	2578481	2579422	.	-	0	ID=GCA000560365_02555;Name=Glycine betaine/carnitine/choline/choline sulfate ABC transporter (Osmoprotectant-binding lipoprotein);locus_tag=GCA000560365_02555;product=Glycine betaine/carnitine/choline/choline sulfate ABC transporter (Osmoprotectant-binding lipoprotein);gene=osmF;Parent=GCA000560365_02555_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1732,COG:M,RefSeq:WP_000721553.1,SO:0001217,UniParc:UPI0000054BC9,UniRef:UniRef100_Q2FVH0,UniRef:UniRef50_Q45462,UniRef:UniRef90_A0A7U7JR79
contig_1	Pyrodigal	gene	2579439	2580074	.	-	.	ID=GCA000560365_02556_gene;locus_tag=GCA000560365_02556;gene=opuBB
contig_1	Pyrodigal	CDS	2579439	2580074	.	-	0	ID=GCA000560365_02556;Name=Glycine betaine/carnitine/choline/choline sulfate ABC transporter (Permease);locus_tag=GCA000560365_02556;product=Glycine betaine/carnitine/choline/choline sulfate ABC transporter (Permease);gene=opuBB;Parent=GCA000560365_02556_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1174,COG:E,RefSeq:WP_000569120.1,SO:0001217,UniParc:UPI0000054BCA,UniRef:UniRef100_Q2FVG9,UniRef:UniRef50_O34878,UniRef:UniRef90_A0A0U1MSP2
contig_1	Pyrodigal	gene	2580071	2581297	.	-	.	ID=GCA000560365_02557_gene;locus_tag=GCA000560365_02557;gene=opuBA
contig_1	Pyrodigal	CDS	2580071	2581297	.	-	0	ID=GCA000560365_02557;Name=Quaternary amine transport ATP-binding protein;locus_tag=GCA000560365_02557;product=Quaternary amine transport ATP-binding protein;gene=opuBA;Parent=GCA000560365_02557_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1125,COG:E,RefSeq:WP_000948970.1,SO:0001217,UniParc:UPI0000696CD8,UniRef:UniRef100_A0A5A8VN53,UniRef:UniRef50_Q45460,UniRef:UniRef90_A0A7U7JRH5
contig_1	Pyrodigal	gene	2581967	2582566	.	-	.	ID=GCA000560365_02558_gene;locus_tag=GCA000560365_02558;gene=ydeI
contig_1	Pyrodigal	CDS	2581967	2582566	.	-	0	ID=GCA000560365_02558;Name=YdhG-like domain-containing protein;locus_tag=GCA000560365_02558;product=YdhG-like domain-containing protein;gene=ydeI;Parent=GCA000560365_02558_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4430,COG:S,RefSeq:WP_001291519.1,SO:0001217,UniParc:UPI00000CAF3B,UniRef:UniRef100_Q2FVG5,UniRef:UniRef50_A0A1E9A998,UniRef:UniRef90_A0A7U7JR81
contig_1	Pyrodigal	gene	2582746	2584383	.	+	.	ID=GCA000560365_02559_gene;locus_tag=GCA000560365_02559;gene=potE
contig_1	Pyrodigal	CDS	2582746	2584383	.	+	0	ID=GCA000560365_02559;Name=APC family permease;locus_tag=GCA000560365_02559;product=APC family permease;gene=potE;Parent=GCA000560365_02559_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0531,COG:E,RefSeq:WP_031808154.1,SO:0001217,UniParc:UPI00044C4DEF,UniRef:UniRef100_UPI00044C4DEF,UniRef:UniRef50_A0A4U9TDF7,UniRef:UniRef90_Q2FVG4
contig_1	Infernal	gene	2584523	2584752	.	-	.	ID=GCA000560365_02560_gene;locus_tag=GCA000560365_02560;gene=S35
contig_1	Infernal	ncRNA	2584523	2584752	3.6e-16	-	.	ID=GCA000560365_02560;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000560365_02560;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000560365_02560_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	2584991	2586343	.	+	.	ID=GCA000560365_02561_gene;locus_tag=GCA000560365_02561;gene=pnbA
contig_1	Pyrodigal	CDS	2584991	2586343	.	+	0	ID=GCA000560365_02561;Name=Carboxylic ester hydrolase;locus_tag=GCA000560365_02561;product=Carboxylic ester hydrolase;gene=pnbA;Parent=GCA000560365_02561_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2272,COG:I,RefSeq:WP_000700921.1,SO:0001217,UniParc:UPI0000054BCE,UniRef:UniRef100_Q2FVG3,UniRef:UniRef50_A0A0H2WZR3,UniRef:UniRef90_A0A0H2WZR3
contig_1	Pyrodigal	gene	2586405	2587592	.	-	.	ID=GCA000560365_02562_gene;locus_tag=GCA000560365_02562;gene=araJ
contig_1	Pyrodigal	CDS	2586405	2587592	.	-	0	ID=GCA000560365_02562;Name=Major facilitator superfamily (MFS) profile domain-containing protein;locus_tag=GCA000560365_02562;product=Major facilitator superfamily (MFS) profile domain-containing protein;gene=araJ;Parent=GCA000560365_02562_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2814,COG:G,RefSeq:WP_000026194.1,SO:0001217,UniParc:UPI00000D9FC5,UniRef:UniRef100_Q2FVG2,UniRef:UniRef50_Q2FVG2,UniRef:UniRef90_Q2FVG2
contig_1	Pyrodigal	gene	2587988	2588764	.	-	.	ID=GCA000560365_02563_gene;locus_tag=GCA000560365_02563;gene=fetB
contig_1	Pyrodigal	CDS	2587988	2588764	.	-	0	ID=GCA000560365_02563;Name=ABC superfamily ATP binding cassette transporter%2C membrane protein;locus_tag=GCA000560365_02563;product=ABC superfamily ATP binding cassette transporter%2C membrane protein;gene=fetB;Parent=GCA000560365_02563_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0390,COG:P,KEGG:K02069,RefSeq:WP_000072147.1,SO:0001217,UniParc:UPI0000054BD0,UniRef:UniRef100_Q2FVG1,UniRef:UniRef50_A0A0D0SFV4,UniRef:UniRef90_A0A3A3AVI9
contig_1	Pyrodigal	gene	2588757	2589419	.	-	.	ID=GCA000560365_02564_gene;locus_tag=GCA000560365_02564
contig_1	Pyrodigal	CDS	2588757	2589419	.	-	0	ID=GCA000560365_02564;Name=ATP-binding cassette domain-containing protein;locus_tag=GCA000560365_02564;product=ATP-binding cassette domain-containing protein;Parent=GCA000560365_02564_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000923520.1,SO:0001217,UniParc:UPI00004B5CD5,UniRef:UniRef100_Q2FVG0,UniRef:UniRef50_A0A0D0SPN6,UniRef:UniRef90_A0A6B1RL06
contig_1	Pyrodigal	gene	2589667	2590743	.	-	.	ID=GCA000560365_02565_gene;locus_tag=GCA000560365_02565;gene=frvX
contig_1	Pyrodigal	CDS	2589667	2590743	.	-	0	ID=GCA000560365_02565;Name=Endoglucanase M;locus_tag=GCA000560365_02565;product=Endoglucanase M;gene=frvX;Parent=GCA000560365_02565_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1363,COG:EG,RefSeq:WP_001076671.1,SO:0001217,UniParc:UPI00000D9FC8,UniRef:UniRef100_Q2FVF9,UniRef:UniRef50_A0A390YIZ1,UniRef:UniRef90_A0A390YIZ1
contig_1	Pyrodigal	gene	2591098	2591364	.	-	.	ID=GCA000560365_02566_gene;locus_tag=GCA000560365_02566
contig_1	Pyrodigal	CDS	2591098	2591364	.	-	0	ID=GCA000560365_02566;Name=Txe/YoeB family addiction module toxin;locus_tag=GCA000560365_02566;product=Txe/YoeB family addiction module toxin;Dbxref=GO:0008219;Parent=GCA000560365_02566_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4115,COG:V,RefSeq:WP_000074048.1,SO:0001217,UniParc:UPI00000D9FC9,UniRef:UniRef100_Q2FVF8,UniRef:UniRef50_Q2FVF8,UniRef:UniRef90_Q2FVF8
contig_1	Pyrodigal	gene	2591364	2591621	.	-	.	ID=GCA000560365_02567_gene;locus_tag=GCA000560365_02567;gene=stbD
contig_1	Pyrodigal	CDS	2591364	2591621	.	-	0	ID=GCA000560365_02567;Name=Antitoxin;locus_tag=GCA000560365_02567;product=Antitoxin;gene=stbD;Parent=GCA000560365_02567_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2161,COG:V,KEGG:K19159,RefSeq:WP_000587616.1,SO:0001217,UniParc:UPI0000054859,UniRef:UniRef100_Q2FVF7,UniRef:UniRef50_A0A8G2HZW6,UniRef:UniRef90_A0A8G2HZW6
contig_1	Pyrodigal	gene	2591980	2592435	.	+	.	ID=GCA000560365_02568_gene;locus_tag=GCA000560365_02568;gene=yehR
contig_1	Pyrodigal	CDS	2591980	2592435	.	+	0	ID=GCA000560365_02568;Name=DUF1307 domain-containing protein;locus_tag=GCA000560365_02568;product=DUF1307 domain-containing protein;gene=yehR;Parent=GCA000560365_02568_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4808,COG:S,RefSeq:WP_000732082.1,SO:0001217,UniParc:UPI00000D9FCA,UniRef:UniRef100_Q2FVF5,UniRef:UniRef50_A0A2T4PYL1,UniRef:UniRef90_Q2FVF5
contig_1	Pyrodigal	gene	2592603	2594180	.	-	.	ID=GCA000560365_02569_gene;locus_tag=GCA000560365_02569;gene=gltB2
contig_1	Pyrodigal	CDS	2592603	2594180	.	-	0	ID=GCA000560365_02569;Name=FMN-binding glutamate synthase family protein;locus_tag=GCA000560365_02569;product=FMN-binding glutamate synthase family protein;gene=gltB2;Parent=GCA000560365_02569_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0069,COG:E,RefSeq:WP_000143503.1,SO:0001217,UniParc:UPI00004B5CD7,UniRef:UniRef100_Q2FVF4,UniRef:UniRef50_A0A2S6D1V6,UniRef:UniRef90_A0A2S6D1V6
contig_1	Pyrodigal	gene	2594375	2595124	.	+	.	ID=GCA000560365_02570_gene;locus_tag=GCA000560365_02570;gene=lnsB
contig_1	Pyrodigal	CDS	2594375	2595124	.	+	0	ID=GCA000560365_02570;Name=CPBP family lipoprotein N-acylation protein LnsB;locus_tag=GCA000560365_02570;product=CPBP family lipoprotein N-acylation protein LnsB;gene=lnsB;Parent=GCA000560365_02570_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K27958,RefSeq:WP_000072444.1,SO:0001217,UniParc:UPI0000696CD9,UniRef:UniRef100_A0A1S5ZNI4,UniRef:UniRef50_Q2FVF3,UniRef:UniRef90_Q2FVF3;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	2595348	2596541	.	-	.	ID=GCA000560365_02571_gene;locus_tag=GCA000560365_02571;gene=cntE
contig_1	Pyrodigal	CDS	2595348	2596541	.	-	0	ID=GCA000560365_02571;Name=staphylopine family metallophore export MFS transporter CntE;locus_tag=GCA000560365_02571;product=staphylopine family metallophore export MFS transporter CntE;Dbxref=GO:0005886,GO:0022857;gene=cntE;Parent=GCA000560365_02571_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2814,COG:G,RefSeq:WP_000675401.1,SO:0001217,UniParc:UPI000005485F,UniRef:UniRef100_A0A0H3JTK0,UniRef:UniRef50_A0A0H3JTK0,UniRef:UniRef90_A0A0H3JTK0
contig_1	Pyrodigal	gene	2596553	2597302	.	-	.	ID=GCA000560365_02572_gene;locus_tag=GCA000560365_02572;gene=cntF
contig_1	Pyrodigal	CDS	2596553	2597302	.	-	0	ID=GCA000560365_02572;Name=Metal-staphylopine import system ATP-binding protein CntF;locus_tag=GCA000560365_02572;product=Metal-staphylopine import system ATP-binding protein CntF;Dbxref=GO:0005524,GO:0005886,GO:0006824,GO:0006829,GO:0015675,GO:0016887;gene=cntF;Parent=GCA000560365_02572_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1124,COG:EP,RefSeq:WP_000590517.1,SO:0001217,UniParc:UPI00004B5CD9,UniRef:UniRef100_Q2FVF1,UniRef:UniRef50_Q2FVF1,UniRef:UniRef90_Q2FVF1;ec_number=7.2.2.-
contig_1	Pyrodigal	gene	2597295	2598110	.	-	.	ID=GCA000560365_02573_gene;locus_tag=GCA000560365_02573;gene=cntD
contig_1	Pyrodigal	CDS	2597295	2598110	.	-	0	ID=GCA000560365_02573;Name=staphylopine uptake ABC transporter ATP-binding protein CntD;locus_tag=GCA000560365_02573;product=staphylopine uptake ABC transporter ATP-binding protein CntD;Dbxref=GO:0005524,GO:0005886,GO:0006824,GO:0006825,GO:0006826,GO:0006829,GO:0015675,GO:0016887;gene=cntD;Parent=GCA000560365_02573_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0444,COG:EP,RefSeq:WP_000173869.1,SO:0001217,UniParc:UPI0000054861,UniRef:UniRef100_Q2FVF0,UniRef:UniRef50_Q2FVF0,UniRef:UniRef90_Q2FVF0;ec_number=7.2.2.-
contig_1	Pyrodigal	gene	2598107	2598976	.	-	.	ID=GCA000560365_02574_gene;locus_tag=GCA000560365_02574;gene=cntC
contig_1	Pyrodigal	CDS	2598107	2598976	.	-	0	ID=GCA000560365_02574;Name=staphylopine uptake ABC transporter permease subunit CntC;locus_tag=GCA000560365_02574;product=staphylopine uptake ABC transporter permease subunit CntC;Dbxref=GO:0005886,GO:0006824,GO:0006825,GO:0006826,GO:0006829,GO:0015675;gene=cntC;Parent=GCA000560365_02574_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1173,COG:EP,RefSeq:WP_000584765.1,SO:0001217,UniParc:UPI0000054862,UniRef:UniRef100_Q2FVE9,UniRef:UniRef50_Q2FVE9,UniRef:UniRef90_Q2FVE9
contig_1	Pyrodigal	gene	2598973	2599908	.	-	.	ID=GCA000560365_02575_gene;locus_tag=GCA000560365_02575;gene=opp1B
contig_1	Pyrodigal	CDS	2598973	2599908	.	-	0	ID=GCA000560365_02575;Name=nickel/cobalt ABC transporter permease;locus_tag=GCA000560365_02575;product=nickel/cobalt ABC transporter permease;Dbxref=GO:0005886,GO:0006824,GO:0006825,GO:0006826,GO:0006829,GO:0015675,GO:0043190,GO:0140359;gene=opp1B;Parent=GCA000560365_02575_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0601,COG:EP,RefSeq:WP_000472235.1,SO:0001217,UniParc:UPI0000054863,UniRef:UniRef100_Q2FVE8,UniRef:UniRef50_Q2FVE8,UniRef:UniRef90_Q2FVE8
contig_1	Pyrodigal	gene	2599921	2601519	.	-	.	ID=GCA000560365_02576_gene;locus_tag=GCA000560365_02576;gene=cntA
contig_1	Pyrodigal	CDS	2599921	2601519	.	-	0	ID=GCA000560365_02576;Name=staphylopine-dependent metal ABC transporter substrate-binding protein CntA;locus_tag=GCA000560365_02576;product=staphylopine-dependent metal ABC transporter substrate-binding protein CntA;Dbxref=GO:0006824,GO:0006825,GO:0006826,GO:0006829,GO:0015675,GO:0015833,GO:0016151,GO:0020037,GO:0030288,GO:0043190,GO:1904680;gene=cntA;Parent=GCA000560365_02576_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001229077,BlastRules:WP_002496571,COG:COG0747,COG:E,RefSeq:WP_001229077.1,SO:0001217,UniParc:UPI0000696CDA,UniRef:UniRef100_A0A068A9N4,UniRef:UniRef50_Q2FVE7,UniRef:UniRef90_Q2FVE7
contig_1	Pyrodigal	gene	2601662	2602963	.	-	.	ID=GCA000560365_02577_gene;locus_tag=GCA000560365_02577;gene=cntM
contig_1	Pyrodigal	CDS	2601662	2602963	.	-	0	ID=GCA000560365_02577;Name=staphylopine dehydrogenase CntM;locus_tag=GCA000560365_02577;product=staphylopine dehydrogenase CntM;Dbxref=GO:0016491;gene=cntM;Parent=GCA000560365_02577_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_096659686,COG:COG4408,COG:S,KEGG:K23122,RefSeq:WP_000040575.1,SO:0001217,UniParc:UPI00015FD778,UniRef:UniRef100_A0A0G2LVZ8,UniRef:UniRef50_A0A0H3JT80,UniRef:UniRef90_A0A0H3JT80;ec_number=1.5.1.52
contig_1	Pyrodigal	gene	2602956	2603774	.	-	.	ID=GCA000560365_02578_gene;locus_tag=GCA000560365_02578;gene=cntL
contig_1	Pyrodigal	CDS	2602956	2603774	.	-	0	ID=GCA000560365_02578;Name=D-histidine (S)-2-aminobutanoyltransferase CntL;locus_tag=GCA000560365_02578;product=D-histidine (S)-2-aminobutanoyltransferase CntL;Dbxref=GO:0030410,GO:0030418;gene=cntL;Parent=GCA000560365_02578_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001058843,RefSeq:WP_001058843.1,SO:0001217,UniParc:UPI0000054866,UniRef:UniRef100_Q2FVE5,UniRef:UniRef50_A0A0H3JXA8,UniRef:UniRef90_A0A0H3JXA8;ec_number=2.5.1.152
contig_1	Pyrodigal	gene	2603785	2604606	.	-	.	ID=GCA000560365_02579_gene;locus_tag=GCA000560365_02579;gene=cntK
contig_1	Pyrodigal	CDS	2603785	2604606	.	-	0	ID=GCA000560365_02579;Name=histidine racemase CntK;locus_tag=GCA000560365_02579;product=histidine racemase CntK;Dbxref=GO:0016853;gene=cntK;Parent=GCA000560365_02579_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0253,COG:E,KEGG:K01780,RefSeq:WP_001081682.1,SO:0001217,UniParc:UPI0000054868,UniRef:UniRef100_Q2FVE4,UniRef:UniRef50_A0A0H3JU78,UniRef:UniRef90_A0A0H3JU78;ec_number=5.1.1.24
contig_1	Pyrodigal	gene	2605473	2605838	.	-	.	ID=GCA000560365_02580_gene;locus_tag=GCA000560365_02580
contig_1	Pyrodigal	CDS	2605473	2605838	.	-	0	ID=GCA000560365_02580;Name=Genomic island nu Sa alpha2;locus_tag=GCA000560365_02580;product=Genomic island nu Sa alpha2;Parent=GCA000560365_02580_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000910581.1,SO:0001217,UniParc:UPI0000054869,UniRef:UniRef100_Q2FVE3,UniRef:UniRef50_Q2FVE3,UniRef:UniRef90_Q2FVE3
contig_1	Pyrodigal	gene	2606101	2606820	.	-	.	ID=GCA000560365_02581_gene;locus_tag=GCA000560365_02581;gene=fabG
contig_1	Pyrodigal	CDS	2606101	2606820	.	-	0	ID=GCA000560365_02581;Name=SDR family oxidoreductase;locus_tag=GCA000560365_02581;product=SDR family oxidoreductase;gene=fabG;Parent=GCA000560365_02581_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1028,COG:I,RefSeq:WP_000257478.1,SO:0001217,UniParc:UPI00016024F3,UniRef:UniRef100_A0A0D6GW28,UniRef:UniRef50_P46331,UniRef:UniRef90_A0A0D6GW28
contig_1	Pyrodigal	gene	2607152	2608690	.	+	.	ID=GCA000560365_02582_gene;locus_tag=GCA000560365_02582;gene=abgT
contig_1	Pyrodigal	CDS	2607152	2608690	.	+	0	ID=GCA000560365_02582;Name=Transporter%2C putative;locus_tag=GCA000560365_02582;product=Transporter%2C putative;gene=abgT;Parent=GCA000560365_02582_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2978,COG:H,KEGG:K12942,RefSeq:WP_000202037.1,SO:0001217,UniParc:UPI00004B5CDE,UniRef:UniRef100_Q2FVE1,UniRef:UniRef50_Q4L8X7,UniRef:UniRef90_Q2FVE1
contig_1	Pyrodigal	gene	2608802	2609224	.	-	.	ID=GCA000560365_02583_gene;locus_tag=GCA000560365_02583;gene=yciW
contig_1	Pyrodigal	CDS	2608802	2609224	.	-	0	ID=GCA000560365_02583;Name=Carboxymuconolactone decarboxylase-like domain-containing protein;locus_tag=GCA000560365_02583;product=Carboxymuconolactone decarboxylase-like domain-containing protein;gene=yciW;Parent=GCA000560365_02583_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2128,COG:P,RefSeq:WP_001146763.1,SO:0001217,UniParc:UPI00000CACD7,UniRef:UniRef100_Q2FVE0,UniRef:UniRef50_Q2FVE0,UniRef:UniRef90_Q2FVE0
contig_1	Pyrodigal	gene	2609676	2610095	.	-	.	ID=GCA000560365_02584_gene;locus_tag=GCA000560365_02584
contig_1	Pyrodigal	CDS	2609676	2610095	.	-	0	ID=GCA000560365_02584;Name=DUF1433 domain-containing protein;locus_tag=GCA000560365_02584;product=DUF1433 domain-containing protein;Parent=GCA000560365_02584_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000037508.1,SO:0001217,UniParc:UPI000005486D,UniRef:UniRef100_Q2FVD9,UniRef:UniRef50_A0A7U7JRB0,UniRef:UniRef90_Q2FVD9
contig_1	Pyrodigal	gene	2610113	2610532	.	-	.	ID=GCA000560365_02585_gene;locus_tag=GCA000560365_02585
contig_1	Pyrodigal	CDS	2610113	2610532	.	-	0	ID=GCA000560365_02585;Name=DUF1433 domain-containing protein;locus_tag=GCA000560365_02585;product=DUF1433 domain-containing protein;Parent=GCA000560365_02585_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000038231.1,SO:0001217,UniParc:UPI000005486E,UniRef:UniRef100_Q2FVD8,UniRef:UniRef50_Q2FVD6,UniRef:UniRef90_Q2FVD8
contig_1	Pyrodigal	gene	2610799	2611221	.	-	.	ID=GCA000560365_02586_gene;locus_tag=GCA000560365_02586
contig_1	Pyrodigal	CDS	2610799	2611221	.	-	0	ID=GCA000560365_02586;Name=DUF1433 domain-containing protein;locus_tag=GCA000560365_02586;product=DUF1433 domain-containing protein;Parent=GCA000560365_02586_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001034756.1,SO:0001217,UniParc:UPI00004B5CDF,UniRef:UniRef100_Q2FVD6,UniRef:UniRef50_Q2FVD6,UniRef:UniRef90_Q2FVD6
contig_1	Pyrodigal	gene	2611472	2612167	.	-	.	ID=GCA000560365_02587_gene;locus_tag=GCA000560365_02587;gene=ydfG
contig_1	Pyrodigal	CDS	2611472	2612167	.	-	0	ID=GCA000560365_02587;Name=putative oxidoreductase SAOUHSC_02778;locus_tag=GCA000560365_02587;product=putative oxidoreductase SAOUHSC_02778;Dbxref=GO:0016491;gene=ydfG;Parent=GCA000560365_02587_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG4221,RefSeq:WP_000217466.1,SO:0001217,UniParc:UPI0000054870,UniRef:UniRef100_Q2FVD5,UniRef:UniRef50_Q2FVD5,UniRef:UniRef90_Q2FVD5;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	2612456	2612737	.	+	.	ID=GCA000560365_02588_gene;locus_tag=GCA000560365_02588
contig_1	Pyrodigal	CDS	2612456	2612737	.	+	0	ID=GCA000560365_02588;Name=DUF1413 domain-containing protein;locus_tag=GCA000560365_02588;product=DUF1413 domain-containing protein;Parent=GCA000560365_02588_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000220938.1,SO:0001217,UniParc:UPI00000D78A1,UniRef:UniRef100_Q2FVD4,UniRef:UniRef50_Q2FVD4,UniRef:UniRef90_Q2FVD4
contig_1	Pyrodigal	gene	2612997	2613188	.	-	.	ID=GCA000560365_02589_gene;locus_tag=GCA000560365_02589
contig_1	Pyrodigal	CDS	2612997	2613188	.	-	0	ID=GCA000560365_02589;Name=HTH cro/C1-type domain-containing protein;locus_tag=GCA000560365_02589;product=HTH cro/C1-type domain-containing protein;Parent=GCA000560365_02589_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001224379.1,SO:0001217,UniParc:UPI00000D788C,UniRef:UniRef100_Q2FVD2,UniRef:UniRef50_S2YA76,UniRef:UniRef90_Q2FVD2
contig_1	Infernal	gene	2613399	2613473	.	+	.	ID=GCA000560365_02590_gene;locus_tag=GCA000560365_02590;gene=sau-19
contig_1	Infernal	ncRNA	2613399	2613473	4.5e-20	+	.	ID=GCA000560365_02590;Name=Staphylococcus sRNA sau-19;locus_tag=GCA000560365_02590;product=Staphylococcus sRNA sau-19;Dbxref=RFAM:RF02386;Parent=GCA000560365_02590_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02386
contig_1	Pyrodigal	gene	2613749	2614543	.	-	.	ID=GCA000560365_02591_gene;locus_tag=GCA000560365_02591
contig_1	Pyrodigal	CDS	2613749	2614543	.	-	0	ID=GCA000560365_02591;Name=putative protein SACOL2493;locus_tag=GCA000560365_02591;product=putative protein SACOL2493;Dbxref=GO:0005886;Parent=GCA000560365_02591_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_031808155.1,SO:0001217,UniParc:UPI00044A06CE,UniRef:UniRef100_UPI00044A06CE,UniRef:UniRef50_Q7A7G4,UniRef:UniRef90_Q2FVD0
contig_1	Pyrodigal	gene	2615079	2615366	.	-	.	ID=GCA000560365_02592_gene;locus_tag=GCA000560365_02592
contig_1	Pyrodigal	CDS	2615079	2615366	.	-	0	ID=GCA000560365_02592;Name=hypothetical protein;locus_tag=GCA000560365_02592;product=hypothetical protein;Parent=GCA000560365_02592_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000521958.1,SO:0001217,UniParc:UPI00004B5CE3,UniRef:UniRef100_Q2FVC9,UniRef:UniRef50_Q2FVC9,UniRef:UniRef90_Q2FVC9
contig_1	Pyrodigal	gene	2615369	2615695	.	-	.	ID=GCA000560365_02593_gene;locus_tag=GCA000560365_02593
contig_1	Pyrodigal	CDS	2615369	2615695	.	-	0	ID=GCA000560365_02593;Name=Cytosolic protein;locus_tag=GCA000560365_02593;product=Cytosolic protein;Parent=GCA000560365_02593_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000495498.1,SO:0001217,UniParc:UPI0000054876,UniRef:UniRef100_Q2FVC8,UniRef:UniRef50_Q2FVC8,UniRef:UniRef90_Q2FVC8
contig_1	Pyrodigal	gene	2615907	2617019	.	-	.	ID=GCA000560365_02594_gene;locus_tag=GCA000560365_02594
contig_1	Pyrodigal	CDS	2615907	2617019	.	-	0	ID=GCA000560365_02594;Name=Cytosolic protein;locus_tag=GCA000560365_02594;product=Cytosolic protein;Parent=GCA000560365_02594_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000054878,UniRef:UniRef100_Q2FVC6,UniRef:UniRef50_Q2FVC6,UniRef:UniRef90_Q2FVC6
contig_1	Pyrodigal	gene	2617016	2617405	.	-	.	ID=GCA000560365_02595_gene;locus_tag=GCA000560365_02595
contig_1	Pyrodigal	CDS	2617016	2617405	.	-	0	ID=GCA000560365_02595;Name=Tandem-type lipoprotein;locus_tag=GCA000560365_02595;product=Tandem-type lipoprotein;Parent=GCA000560365_02595_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0AA94F8T8
contig_1	Pyrodigal	gene	2617354	2617800	.	-	.	ID=GCA000560365_02596_gene;locus_tag=GCA000560365_02596
contig_1	Pyrodigal	CDS	2617354	2617800	.	-	0	ID=GCA000560365_02596;Name=Tandem-type lipoprotein;locus_tag=GCA000560365_02596;product=Tandem-type lipoprotein;Parent=GCA000560365_02596_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A0E1XB94
contig_1	Pyrodigal	gene	2617912	2618688	.	-	.	ID=GCA000560365_02597_gene;locus_tag=GCA000560365_02597
contig_1	Pyrodigal	CDS	2617912	2618688	.	-	0	ID=GCA000560365_02597;Name=putative lipoprotein SAUSA300_2430;locus_tag=GCA000560365_02597;product=putative lipoprotein SAUSA300_2430;Dbxref=GO:0005886;Parent=GCA000560365_02597_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001549768.1,SO:0001217,UniParc:UPI000005487A,UniRef:UniRef100_Q2FVC4,UniRef:UniRef50_Q7A7G4,UniRef:UniRef90_Q2FVC4
contig_1	Pyrodigal	gene	2618991	2621852	.	-	.	ID=GCA000560365_02598_gene;locus_tag=GCA000560365_02598
contig_1	Pyrodigal	CDS	2618991	2621852	.	-	0	ID=GCA000560365_02598;Name=DUF3427 domain-containing protein;locus_tag=GCA000560365_02598;product=DUF3427 domain-containing protein;Parent=GCA000560365_02598_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000088722.1,SO:0001217,UniParc:UPI000005487B,UniRef:UniRef100_Q2FVC3,UniRef:UniRef50_A0A380HJB7,UniRef:UniRef90_Q2FVC3
contig_1	Pyrodigal	gene	2621854	2622246	.	-	.	ID=GCA000560365_02599_gene;locus_tag=GCA000560365_02599;gene=mutT
contig_1	Pyrodigal	CDS	2621854	2622246	.	-	0	ID=GCA000560365_02599;Name=8-oxo-dGTP diphosphatase;locus_tag=GCA000560365_02599;product=8-oxo-dGTP diphosphatase;gene=mutT;Parent=GCA000560365_02599_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0494,COG:V,RefSeq:WP_000755954.1,SO:0001217,UniParc:UPI00003B196D,UniRef:UniRef100_Q2FVC2,UniRef:UniRef50_A0A3A5KZ23,UniRef:UniRef90_A0A3A5KZ23
contig_1	Pyrodigal	gene	2622534	2624171	.	+	.	ID=GCA000560365_02600_gene;locus_tag=GCA000560365_02600;gene=pgcA
contig_1	Pyrodigal	CDS	2622534	2624171	.	+	0	ID=GCA000560365_02600;Name=Phosphoglucomutase;locus_tag=GCA000560365_02600;product=Phosphoglucomutase;Dbxref=GO:0000287,GO:0004614,GO:0006006,GO:0006166,GO:0008973,GO:0009246;gene=pgcA;Parent=GCA000560365_02600_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1109,COG:G,SO:0001217,UniParc:UPI0001E07159,UniRef:UniRef100_A0A133PV72,UniRef:UniRef50_Q2FVC1,UniRef:UniRef90_Q2FVC1;ec_number=5.4.2.2
contig_1	Pyrodigal	gene	2624455	2624721	.	+	.	ID=GCA000560365_02601_gene;locus_tag=GCA000560365_02601
contig_1	Pyrodigal	CDS	2624455	2624721	.	+	0	ID=GCA000560365_02601;Name=Secreted protein;locus_tag=GCA000560365_02601;product=Secreted protein;Parent=GCA000560365_02601_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000678764.1,SO:0001217,UniParc:UPI000005487E,UniRef:UniRef100_Q2FVC0,UniRef:UniRef50_A0A2K4AFJ0,UniRef:UniRef90_A0A2K4AFJ0
contig_1	Pyrodigal	gene	2624865	2625173	.	+	.	ID=GCA000560365_02602_gene;locus_tag=GCA000560365_02602
contig_1	Pyrodigal	CDS	2624865	2625173	.	+	0	ID=GCA000560365_02602;Name=DUF3784 domain-containing protein;locus_tag=GCA000560365_02602;product=DUF3784 domain-containing protein;Parent=GCA000560365_02602_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000217710.1,SO:0001217,UniParc:UPI000005487F,UniRef:UniRef100_Q2G2B5,UniRef:UniRef50_Q2G2B5,UniRef:UniRef90_Q2G2B5
contig_1	Pyrodigal	gene	2625281	2625451	.	-	.	ID=GCA000560365_02603_gene;locus_tag=GCA000560365_02603
contig_1	Pyrodigal	CDS	2625281	2625451	.	-	0	ID=GCA000560365_02603;Name=hypothetical protein;locus_tag=GCA000560365_02603;product=hypothetical protein;Parent=GCA000560365_02603_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000875586.1,SO:0001217,UniParc:UPI0001698E26,UniRef:UniRef100_A0A641A834,UniRef:UniRef50_Q2G2B4,UniRef:UniRef90_Q2G2B4
contig_1	Pyrodigal	gene	2625495	2626688	.	-	.	ID=GCA000560365_02604_gene;locus_tag=GCA000560365_02604
contig_1	Pyrodigal	CDS	2625495	2626688	.	-	0	ID=GCA000560365_02604;Name=MFS transporter;locus_tag=GCA000560365_02604;product=MFS transporter;Parent=GCA000560365_02604_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000966099.1,SO:0001217,UniParc:UPI00004B5CE5,UniRef:UniRef100_Q2G2B3,UniRef:UniRef50_A0A0M2NSQ1,UniRef:UniRef90_Q2G2B3
contig_1	Pyrodigal	gene	2627072	2627638	.	-	.	ID=GCA000560365_02605_gene;locus_tag=GCA000560365_02605
contig_1	Pyrodigal	CDS	2627072	2627638	.	-	0	ID=GCA000560365_02605;Name=Surface protein;locus_tag=GCA000560365_02605;product=Surface protein;Parent=GCA000560365_02605_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K14195,RefSeq:WP_001549770.1,SO:0001217,UniParc:UPI00025F4B82,UniRef:UniRef100_A0A389V7U2,UniRef:UniRef50_A0A389V7U2,UniRef:UniRef90_A0A389V7U2
contig_1	Pyrodigal	gene	2627808	2628137	.	+	.	ID=GCA000560365_02606_gene;locus_tag=GCA000560365_02606
contig_1	Pyrodigal	CDS	2627808	2628137	.	+	0	ID=GCA000560365_02606;Name=hypothetical protein;locus_tag=GCA000560365_02606;product=hypothetical protein;Parent=GCA000560365_02606_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00026C21C6,UniRef:UniRef100_A0A380EM44,UniRef:UniRef50_A0A380EM23,UniRef:UniRef90_A0A380EM23
contig_1	Pyrodigal	gene	2629084	2630418	.	-	.	ID=GCA000560365_02607_gene;locus_tag=GCA000560365_02607
contig_1	Pyrodigal	CDS	2629084	2630418	.	-	0	ID=GCA000560365_02607;Name=Cell wall anchor protein;locus_tag=GCA000560365_02607;product=Cell wall anchor protein;Parent=GCA000560365_02607_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K14195,RefSeq:WP_001549775.1,SO:0001217,UniParc:UPI0000696CDF,UniRef:UniRef100_A0A6B5EVI7,UniRef:UniRef50_A0A7U7F058,UniRef:UniRef90_A0A7U7F058
contig_1	Pyrodigal	gene	2630724	2631080	.	-	.	ID=GCA000560365_02608_gene;locus_tag=GCA000560365_02608;gene=sarT
contig_1	Pyrodigal	CDS	2630724	2631080	.	-	0	ID=GCA000560365_02608;Name=HTH-type transcriptional regulator SarT;locus_tag=GCA000560365_02608;product=HTH-type transcriptional regulator SarT;Dbxref=GO:0003677,GO:0003700,GO:0005737,GO:0006950;gene=sarT;Parent=GCA000560365_02608_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000998869,COG:COG1846,COG:K,RefSeq:WP_000998869.1,SO:0001217,UniParc:UPI00004B5CE6,UniRef:UniRef100_Q2G2B1,UniRef:UniRef50_Q2G2B1,UniRef:UniRef90_Q2G2B1
contig_1	Pyrodigal	gene	2631407	2632150	.	+	.	ID=GCA000560365_02609_gene;locus_tag=GCA000560365_02609;gene=sarU
contig_1	Pyrodigal	CDS	2631407	2632150	.	+	0	ID=GCA000560365_02609;Name=HTH-type transcriptional regulator SarU;locus_tag=GCA000560365_02609;product=HTH-type transcriptional regulator SarU;Dbxref=GO:0003677,GO:0003700,GO:0005737,GO:0006950;gene=sarU;Parent=GCA000560365_02609_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000386367,COG:COG1846,COG:K,RefSeq:WP_000386366.1,SO:0001217,UniParc:UPI0000696CE0,UniRef:UniRef100_A0A1S6DRK0,UniRef:UniRef50_Q2G1T7,UniRef:UniRef90_Q2G1T7
contig_1	Pyrodigal	gene	2632361	2633227	.	-	.	ID=GCA000560365_02610_gene;locus_tag=GCA000560365_02610;gene=galU
contig_1	Pyrodigal	CDS	2632361	2633227	.	-	0	ID=GCA000560365_02610;Name=UTP--glucose-1-phosphate uridylyltransferase GalU;locus_tag=GCA000560365_02610;product=UTP--glucose-1-phosphate uridylyltransferase GalU;Dbxref=GO:0003983,GO:0006011,GO:0009246;gene=galU;Parent=GCA000560365_02610_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1210,COG:M,RefSeq:WP_000721336.1,SO:0001217,UniParc:UPI00000CA9A8,UniRef:UniRef100_Q2G1T6,UniRef:UniRef50_Q2G1T6,UniRef:UniRef90_Q2G1T6;ec_number=2.7.7.9
contig_1	Pyrodigal	gene	2633407	2636229	.	-	.	ID=GCA000560365_02611_gene;locus_tag=GCA000560365_02611;gene=fnbB
contig_1	Pyrodigal	CDS	2633407	2636229	.	-	0	ID=GCA000560365_02611;Name=fibronectin-binding protein FnbB;locus_tag=GCA000560365_02611;product=fibronectin-binding protein FnbB;Dbxref=GO:0005576,GO:0007155;gene=fnbB;Parent=GCA000560365_02611_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001566815,RefSeq:WP_000841422.1,SO:0001217,UniParc:UPI00000B7719,UniRef:UniRef100_A0A0H2XKG3,UniRef:UniRef50_P14738,UniRef:UniRef90_A0A0H2XKG3
contig_1	Pyrodigal	gene	2636911	2639967	.	-	.	ID=GCA000560365_02612_gene;locus_tag=GCA000560365_02612;gene=fnbA
contig_1	Pyrodigal	CDS	2636911	2639967	.	-	0	ID=GCA000560365_02612;Name=Fibronectin-binding protein A;locus_tag=GCA000560365_02612;product=Fibronectin-binding protein A;Dbxref=GO:0005576,GO:0007155;gene=fnbA;Parent=GCA000560365_02612_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000794589.1,SO:0001217,UniParc:UPI0000052256,UniRef:UniRef100_Q2FE03,UniRef:UniRef50_P14738,UniRef:UniRef90_P14738
contig_1	Pyrodigal	gene	2640436	2641794	.	-	.	ID=GCA000560365_02613_gene;locus_tag=GCA000560365_02613;gene=gntT
contig_1	Pyrodigal	CDS	2640436	2641794	.	-	0	ID=GCA000560365_02613;Name=Gluconate permease%2C putative;locus_tag=GCA000560365_02613;product=Gluconate permease%2C putative;gene=gntT;Parent=GCA000560365_02613_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2610,COG:G,RefSeq:WP_000481425.1,SO:0001217,UniParc:UPI000005488A,UniRef:UniRef100_Q2G206,UniRef:UniRef50_O31862,UniRef:UniRef90_Q2G206
contig_1	Pyrodigal	gene	2641911	2643464	.	-	.	ID=GCA000560365_02614_gene;locus_tag=GCA000560365_02614;gene=gntK
contig_1	Pyrodigal	CDS	2641911	2643464	.	-	0	ID=GCA000560365_02614;Name=gluconokinase;locus_tag=GCA000560365_02614;product=gluconokinase;Dbxref=GO:0009255,GO:0019521,GO:0046316;gene=gntK;Parent=GCA000560365_02614_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1070,COG:G,KEGG:K25031,RefSeq:WP_000876663.1,SO:0001217,UniParc:UPI000005488B,UniRef:UniRef100_Q2G205,UniRef:UniRef50_A0A1X1FDN6,UniRef:UniRef90_A0A077UL99;ec_number=2.7.1.12
contig_1	Pyrodigal	gene	2643488	2644168	.	-	.	ID=GCA000560365_02615_gene;locus_tag=GCA000560365_02615;gene=gntR
contig_1	Pyrodigal	CDS	2643488	2644168	.	-	0	ID=GCA000560365_02615;Name=FCD domain-containing protein;locus_tag=GCA000560365_02615;product=FCD domain-containing protein;gene=gntR;Parent=GCA000560365_02615_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1802,COG:K,KEGG:K11476,RefSeq:WP_000990133.1,SO:0001217,UniParc:UPI00000522E1,UniRef:UniRef100_Q2G208,UniRef:UniRef50_A0A239YRW4,UniRef:UniRef90_A0A0U1MT80
contig_1	Pyrodigal	gene	2644322	2645086	.	-	.	ID=GCA000560365_02616_gene;locus_tag=GCA000560365_02616;gene=soxR
contig_1	Pyrodigal	CDS	2644322	2645086	.	-	0	ID=GCA000560365_02616;Name=HTH merR-type domain-containing protein;locus_tag=GCA000560365_02616;product=HTH merR-type domain-containing protein;gene=soxR;Parent=GCA000560365_02616_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0789,COG:K,RefSeq:WP_031808156.1,SO:0001217,UniParc:UPI00044A494B,UniRef:UniRef100_UPI00044A494B,UniRef:UniRef50_Q2G2L8,UniRef:UniRef90_Q2G2L8
contig_1	Pyrodigal	gene	2645251	2645943	.	-	.	ID=GCA000560365_02617_gene;locus_tag=GCA000560365_02617;gene=yjbM
contig_1	Pyrodigal	CDS	2645251	2645943	.	-	0	ID=GCA000560365_02617;Name=GTP pyrophosphokinase YwaC;locus_tag=GCA000560365_02617;product=GTP pyrophosphokinase YwaC;gene=yjbM;Parent=GCA000560365_02617_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2357,COG:FT,RefSeq:WP_000289136.1,SO:0001217,UniParc:UPI000005488E,UniRef:UniRef100_Q2G2L7,UniRef:UniRef50_A0A240A5W9,UniRef:UniRef90_A0A7U7JRL0
contig_1	Pyrodigal	gene	2646174	2646590	.	-	.	ID=GCA000560365_02618_gene;locus_tag=GCA000560365_02618;gene=ydaT
contig_1	Pyrodigal	CDS	2646174	2646590	.	-	0	ID=GCA000560365_02618;Name=DUF2188 domain-containing protein;locus_tag=GCA000560365_02618;product=DUF2188 domain-containing protein;gene=ydaT;Parent=GCA000560365_02618_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4876,COG:S,RefSeq:WP_001117054.1,SO:0001217,UniParc:UPI0000054890,UniRef:UniRef100_Q2G2L6,UniRef:UniRef50_Q2G2L6,UniRef:UniRef90_Q2G2L6
contig_1	Pyrodigal	gene	2646729	2648552	.	-	.	ID=GCA000560365_02619_gene;locus_tag=GCA000560365_02619;gene=yccC
contig_1	Pyrodigal	CDS	2646729	2648552	.	-	0	ID=GCA000560365_02619;Name=Integral membrane bound transporter domain-containing protein;locus_tag=GCA000560365_02619;product=Integral membrane bound transporter domain-containing protein;gene=yccC;Parent=GCA000560365_02619_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1289,COG:S,RefSeq:WP_000586392.1,SO:0001217,UniParc:UPI00015FD77B,UniRef:UniRef100_A0A380ENV1,UniRef:UniRef50_A0A853V3T2,UniRef:UniRef90_A0A0H3JXE4
contig_1	Pyrodigal	gene	2649030	2650307	.	-	.	ID=GCA000560365_02620_gene;locus_tag=GCA000560365_02620;gene=uhpC
contig_1	Pyrodigal	CDS	2649030	2650307	.	-	0	ID=GCA000560365_02620;Name=Major facilitator superfamily (MFS) profile domain-containing protein;locus_tag=GCA000560365_02620;product=Major facilitator superfamily (MFS) profile domain-containing protein;gene=uhpC;Parent=GCA000560365_02620_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2271,COG:G,RefSeq:WP_000660709.1,SO:0001217,UniParc:UPI0000054892,UniRef:UniRef100_Q2FVB9,UniRef:UniRef50_Q2FVB9,UniRef:UniRef90_Q2FVB9
contig_1	Pyrodigal	gene	2650854	2651465	.	+	.	ID=GCA000560365_02621_gene;locus_tag=GCA000560365_02621;gene=uptA
contig_1	Pyrodigal	CDS	2650854	2651465	.	+	0	ID=GCA000560365_02621;Name=Undecaprenyl phosphate transporter A;locus_tag=GCA000560365_02621;product=Undecaprenyl phosphate transporter A;Dbxref=GO:0005886,GO:0071555;gene=uptA;Parent=GCA000560365_02621_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0586,COG:M,KEGG:K03975,RefSeq:WP_000435044.1,SO:0001217,UniParc:UPI0000054893,UniRef:UniRef100_Q2FVB8,UniRef:UniRef50_Q2FVB8,UniRef:UniRef90_Q2FVB8
contig_1	Pyrodigal	gene	2651562	2652725	.	-	.	ID=GCA000560365_02622_gene;locus_tag=GCA000560365_02622
contig_1	Pyrodigal	CDS	2651562	2652725	.	-	0	ID=GCA000560365_02622;Name=Major facilitator superfamily (MFS) profile domain-containing protein;locus_tag=GCA000560365_02622;product=Major facilitator superfamily (MFS) profile domain-containing protein;Parent=GCA000560365_02622_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000610884.1,SO:0001217,UniParc:UPI0000054894,UniRef:UniRef100_Q2FVB6,UniRef:UniRef50_Q2FVB6,UniRef:UniRef90_Q2FVB6
contig_1	Pyrodigal	gene	2652718	2653182	.	-	.	ID=GCA000560365_02623_gene;locus_tag=GCA000560365_02623
contig_1	Pyrodigal	CDS	2652718	2653182	.	-	0	ID=GCA000560365_02623;Name=HTH marR-type domain-containing protein;locus_tag=GCA000560365_02623;product=HTH marR-type domain-containing protein;Parent=GCA000560365_02623_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00004B5CEC,UniRef:UniRef100_Q2FVB5,UniRef:UniRef50_Q2FVB5,UniRef:UniRef90_Q2FVB5
contig_1	Pyrodigal	gene	2653610	2654305	.	+	.	ID=GCA000560365_02624_gene;locus_tag=GCA000560365_02624;gene=rbbA
contig_1	Pyrodigal	CDS	2653610	2654305	.	+	0	ID=GCA000560365_02624;Name=ABC transporter domain-containing protein;locus_tag=GCA000560365_02624;product=ABC transporter domain-containing protein;gene=rbbA;Parent=GCA000560365_02624_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1131,COG:JV,RefSeq:WP_000382904.1,SO:0001217,UniParc:UPI0000054896,UniRef:UniRef100_Q2FVB4,UniRef:UniRef50_Q2FVB4,UniRef:UniRef90_Q2FVB4
contig_1	Pyrodigal	gene	2654307	2655077	.	+	.	ID=GCA000560365_02625_gene;locus_tag=GCA000560365_02625
contig_1	Pyrodigal	CDS	2654307	2655077	.	+	0	ID=GCA000560365_02625;Name=Membrane spanning protein%2C putative;locus_tag=GCA000560365_02625;product=Membrane spanning protein%2C putative;Parent=GCA000560365_02625_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000536961.1,SO:0001217,UniParc:UPI0000054897,UniRef:UniRef100_Q2FVB3,UniRef:UniRef50_K9AVH9,UniRef:UniRef90_Q2FVB3
contig_1	Pyrodigal	gene	2655450	2657414	.	+	.	ID=GCA000560365_02626_gene;locus_tag=GCA000560365_02626;gene=fbp
contig_1	Pyrodigal	CDS	2655450	2657414	.	+	0	ID=GCA000560365_02626;Name=Fructose-1%2C6-bisphosphatase class 3;locus_tag=GCA000560365_02626;product=Fructose-1%2C6-bisphosphatase class 3;Dbxref=GO:0006094,GO:0042132;gene=fbp;Parent=GCA000560365_02626_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3855,COG:G,KEGG:K04041,RefSeq:WP_000192168.1,SO:0001217,UniParc:UPI0000054898,UniRef:UniRef100_Q2FVB2,UniRef:UniRef50_Q2FVB2,UniRef:UniRef90_Q2FVB2;ec_number=3.1.3.11
contig_1	Infernal	gene	2657448	2657537	.	-	.	ID=GCA000560365_02627_gene;locus_tag=GCA000560365_02627;gene=fstAT
contig_1	Infernal	ncRNA	2657448	2657537	3.9e-10	-	.	ID=GCA000560365_02627;Name=Fst antitoxin sRNA;locus_tag=GCA000560365_02627;product=Fst antitoxin sRNA;Dbxref=RFAM:RF01797;Parent=GCA000560365_02627_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF01797
contig_1	Bakta	gene	2657562	2657639	.	+	.	ID=GCA000560365_02628_gene;locus_tag=GCA000560365_02628;inference=ab initio prediction:Bakta
contig_1	Bakta	CDS	2657562	2657639	.	+	0	ID=GCA000560365_02628;Name=Secreted protein;locus_tag=GCA000560365_02628;product=Secreted protein;Parent=GCA000560365_02628_gene;Note=SO:0001217,UniParc:UPI00000D9FF2,UniRef:UniRef100_Q2FVB1,UniRef:UniRef50_Q2FVB1,UniRef:UniRef90_Q2FVB1
contig_1	Pyrodigal	gene	2657758	2658837	.	+	.	ID=GCA000560365_02629_gene;locus_tag=GCA000560365_02629;gene=ykvI
contig_1	Pyrodigal	CDS	2657758	2658837	.	+	0	ID=GCA000560365_02629;Name=Branched-chain amino acid transport system carrier protein;locus_tag=GCA000560365_02629;product=Branched-chain amino acid transport system carrier protein;gene=ykvI;Parent=GCA000560365_02629_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3949,COG:S,RefSeq:WP_001549787.1,SO:0001217,UniParc:UPI0000047407,UniRef:UniRef100_A0A0D6WG35,UniRef:UniRef50_Q2FVB0,UniRef:UniRef90_Q2FVB0
contig_1	Pyrodigal	gene	2658942	2659535	.	-	.	ID=GCA000560365_02630_gene;locus_tag=GCA000560365_02630;gene=mhqD
contig_1	Pyrodigal	CDS	2658942	2659535	.	-	0	ID=GCA000560365_02630;Name=methylhydroquinone degradation carboxylesterase MhqD;locus_tag=GCA000560365_02630;product=methylhydroquinone degradation carboxylesterase MhqD;gene=mhqD;Parent=GCA000560365_02630_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0400,COG:R,RefSeq:WP_000400032.1,SO:0001217,UniParc:UPI00004B5CED,UniRef:UniRef100_Q2FVA9,UniRef:UniRef50_Q2FVA9,UniRef:UniRef90_Q2FVA9
contig_1	Pyrodigal	gene	2659557	2660525	.	-	.	ID=GCA000560365_02631_gene;locus_tag=GCA000560365_02631;gene=gloA
contig_1	Pyrodigal	CDS	2659557	2660525	.	-	0	ID=GCA000560365_02631;Name=Dioxygenase;locus_tag=GCA000560365_02631;product=Dioxygenase;gene=gloA;Parent=GCA000560365_02631_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0346,COG:Q,KEGG:K15975,RefSeq:WP_000609348.1,SO:0001217,UniParc:UPI0000047406,UniRef:UniRef100_Q2FVA8,UniRef:UniRef50_F4BQ31,UniRef:UniRef90_A0A3A5LQ32
contig_1	Pyrodigal	gene	2660603	2661037	.	-	.	ID=GCA000560365_02632_gene;locus_tag=GCA000560365_02632;gene=marR
contig_1	Pyrodigal	CDS	2660603	2661037	.	-	0	ID=GCA000560365_02632;Name=HTH marR-type domain-containing protein;locus_tag=GCA000560365_02632;product=HTH marR-type domain-containing protein;gene=marR;Parent=GCA000560365_02632_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1846,COG:K,RefSeq:WP_000376235.1,SO:0001217,UniParc:UPI000005489B,UniRef:UniRef100_Q2FVA7,UniRef:UniRef50_Q2FVA7,UniRef:UniRef90_Q2FVA7
contig_1	Pyrodigal	gene	2661264	2661548	.	+	.	ID=GCA000560365_02633_gene;locus_tag=GCA000560365_02633;gene=yidJ
contig_1	Pyrodigal	CDS	2661264	2661548	.	+	0	ID=GCA000560365_02633;Name=Acetyltransferase;locus_tag=GCA000560365_02633;product=Acetyltransferase;gene=yidJ;Parent=GCA000560365_02633_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2388,COG:R,RefSeq:WP_000067115.1,SO:0001217,UniParc:UPI00004B5CEE,UniRef:UniRef100_Q2FVA6,UniRef:UniRef50_A0A1E9A8Y1,UniRef:UniRef90_A0A7U7JRC7
contig_1	Pyrodigal	gene	2661719	2662525	.	+	.	ID=GCA000560365_02634_gene;locus_tag=GCA000560365_02634;gene=catE
contig_1	Pyrodigal	CDS	2661719	2662525	.	+	0	ID=GCA000560365_02634;Name=Glyoxalase;locus_tag=GCA000560365_02634;product=Glyoxalase;gene=catE;Parent=GCA000560365_02634_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2514,COG:Q,RefSeq:WP_031808157.1,SO:0001217,UniParc:UPI00044CBAB1,UniRef:UniRef100_UPI00044CBAB1,UniRef:UniRef50_A0A6L9GI04,UniRef:UniRef90_A0A0S2JAB5
contig_1	Pyrodigal	gene	2662645	2663316	.	-	.	ID=GCA000560365_02635_gene;locus_tag=GCA000560365_02635;gene=nfnB
contig_1	Pyrodigal	CDS	2662645	2663316	.	-	0	ID=GCA000560365_02635;Name=Putative NAD(P)H nitroreductase SAB2397c;locus_tag=GCA000560365_02635;product=Putative NAD(P)H nitroreductase SAB2397c;Dbxref=GO:0005829,GO:0046256,GO:0046857;gene=nfnB;Parent=GCA000560365_02635_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0778,RefSeq:WP_000069101.1,SO:0001217,UniParc:UPI00004B5CEF,UniRef:UniRef100_Q2FVA4,UniRef:UniRef50_Q4A087,UniRef:UniRef90_Q2FVA4;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	2663586	2664578	.	+	.	ID=GCA000560365_02636_gene;locus_tag=GCA000560365_02636;gene=ldhD
contig_1	Pyrodigal	CDS	2663586	2664578	.	+	0	ID=GCA000560365_02636;Name=D-lactate dehydrogenase;locus_tag=GCA000560365_02636;product=D-lactate dehydrogenase;Dbxref=GO:0008720,GO:0051287;gene=ldhD;Parent=GCA000560365_02636_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CHR,COG:COG1052,RefSeq:WP_000161536.1,SO:0001217,UniParc:UPI00000BC046,UniRef:UniRef100_Q5HD29,UniRef:UniRef50_P63940,UniRef:UniRef90_P63940;ec_number=1.1.1.28
contig_1	Pyrodigal	gene	2664827	2665627	.	-	.	ID=GCA000560365_02637_gene;locus_tag=GCA000560365_02637;gene=cof
contig_1	Pyrodigal	CDS	2664827	2665627	.	-	0	ID=GCA000560365_02637;Name=HAD family hydrolase;locus_tag=GCA000560365_02637;product=HAD family hydrolase;gene=cof;Parent=GCA000560365_02637_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0561,COG:HR,RefSeq:WP_000237518.1,SO:0001217,UniParc:UPI00004B5CF0,UniRef:UniRef100_A0A0E7PWL2,UniRef:UniRef50_Q2FVA2,UniRef:UniRef90_Q2FVA2
contig_1	Pyrodigal	gene	2665948	2666583	.	+	.	ID=GCA000560365_02638_gene;locus_tag=GCA000560365_02638;gene=rbbA
contig_1	Pyrodigal	CDS	2665948	2666583	.	+	0	ID=GCA000560365_02638;Name=ABC transporter domain-containing protein;locus_tag=GCA000560365_02638;product=ABC transporter domain-containing protein;gene=rbbA;Parent=GCA000560365_02638_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1131,COG:JV,KEGG:K16917,RefSeq:WP_000773921.1,SO:0001217,UniParc:UPI00000548A1,UniRef:UniRef100_Q2FVA1,UniRef:UniRef50_Q2FVA1,UniRef:UniRef90_Q2FVA1
contig_1	Pyrodigal	gene	2666598	2667320	.	+	.	ID=GCA000560365_02639_gene;locus_tag=GCA000560365_02639
contig_1	Pyrodigal	CDS	2666598	2667320	.	+	0	ID=GCA000560365_02639;Name=Peptide ABC transporter permease;locus_tag=GCA000560365_02639;product=Peptide ABC transporter permease;Parent=GCA000560365_02639_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0001698BF1,UniRef:UniRef100_X5EI48,UniRef:UniRef50_Q45592,UniRef:UniRef90_Q2FVA0
contig_1	Pyrodigal	gene	2667480	2668100	.	-	.	ID=GCA000560365_02640_gene;locus_tag=GCA000560365_02640;gene=srtA
contig_1	Pyrodigal	CDS	2667480	2668100	.	-	0	ID=GCA000560365_02640;Name=class A sortase SrtA;locus_tag=GCA000560365_02640;product=class A sortase SrtA;Dbxref=GO:0005886,GO:0006508,GO:0008234,GO:0046872;gene=srtA;Parent=GCA000560365_02640_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000759361,COG:COG3764,COG:M,RefSeq:WP_000759361.1,SO:0001217,UniParc:UPI00000B26CB,UniRef:UniRef100_Q2FV99,UniRef:UniRef50_Q2FV99,UniRef:UniRef90_Q2FV99;ec_number=3.4.22.70
contig_1	Pyrodigal	gene	2668294	2668785	.	+	.	ID=GCA000560365_02641_gene;locus_tag=GCA000560365_02641;gene=mnaT
contig_1	Pyrodigal	CDS	2668294	2668785	.	+	0	ID=GCA000560365_02641;Name=N-acetyltransferase domain-containing protein;locus_tag=GCA000560365_02641;product=N-acetyltransferase domain-containing protein;gene=mnaT;Parent=GCA000560365_02641_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1247,COG:E,KEGG:K24217,RefSeq:WP_000621927.1,SO:0001217,UniParc:UPI00000548A7,UniRef:UniRef100_Q2FV98,UniRef:UniRef50_Q2FV98,UniRef:UniRef90_Q2FV98;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	2669223	2669393	.	-	.	ID=GCA000560365_02642_gene;locus_tag=GCA000560365_02642
contig_1	Pyrodigal	CDS	2669223	2669393	.	-	0	ID=GCA000560365_02642;Name=Mobilization protein;locus_tag=GCA000560365_02642;product=Mobilization protein;Parent=GCA000560365_02642_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001549802.1,SO:0001217,UniParc:UPI00000D9FFB,UniRef:UniRef100_Q2FV97,UniRef:UniRef50_A0A1D4MSI6,UniRef:UniRef90_Q2FV97
contig_1	Pyrodigal	gene	2669572	2670471	.	-	.	ID=GCA000560365_02643_gene;locus_tag=GCA000560365_02643;gene=sdaAA
contig_1	Pyrodigal	CDS	2669572	2670471	.	-	0	ID=GCA000560365_02643;Name=L-serine ammonia-lyase%2C iron-sulfur-dependent%2C subunit alpha;locus_tag=GCA000560365_02643;product=L-serine ammonia-lyase%2C iron-sulfur-dependent%2C subunit alpha;Dbxref=GO:0003941,GO:0006094,GO:0006565;gene=sdaAA;Parent=GCA000560365_02643_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1760,COG:E,KEGG:K01752,RefSeq:WP_000460421.1,SO:0001217,UniParc:UPI0000052255,UniRef:UniRef100_Q2FV95,UniRef:UniRef50_A0AAN1D8A6,UniRef:UniRef90_A0A2K4ALL6;ec_number=4.3.1.17
contig_1	Pyrodigal	gene	2670485	2671165	.	-	.	ID=GCA000560365_02644_gene;locus_tag=GCA000560365_02644;gene=sdaAB
contig_1	Pyrodigal	CDS	2670485	2671165	.	-	0	ID=GCA000560365_02644;Name=L-serine ammonia-lyase%2C iron-sulfur-dependent subunit beta;locus_tag=GCA000560365_02644;product=L-serine ammonia-lyase%2C iron-sulfur-dependent subunit beta;Dbxref=GO:0003941,GO:0006094,GO:0006565;gene=sdaAB;Parent=GCA000560365_02644_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1760,COG:E,KEGG:K01752,RefSeq:WP_001140234.1,SO:0001217,UniParc:UPI00000548A9,UniRef:UniRef100_Q2FV94,UniRef:UniRef50_A0A0U1E0K5,UniRef:UniRef90_A0A2K4ALQ3;ec_number=4.3.1.17
contig_1	Pyrodigal	gene	2671168	2672211	.	-	.	ID=GCA000560365_02645_gene;locus_tag=GCA000560365_02645;gene=frwC
contig_1	Pyrodigal	CDS	2671168	2672211	.	-	0	ID=GCA000560365_02645;Name=Phosphotransferase system EIIC domain-containing protein;locus_tag=GCA000560365_02645;product=Phosphotransferase system EIIC domain-containing protein;gene=frwC;Parent=GCA000560365_02645_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1299,COG:G,RefSeq:WP_000353634.1,SO:0001217,UniParc:UPI00000548AA,UniRef:UniRef100_Q2FV93,UniRef:UniRef50_Q2FV93,UniRef:UniRef90_Q2FV93
contig_1	Pyrodigal	gene	2672762	2672965	.	+	.	ID=GCA000560365_02646_gene;locus_tag=GCA000560365_02646
contig_1	Pyrodigal	CDS	2672762	2672965	.	+	0	ID=GCA000560365_02646;Name=hypothetical protein;locus_tag=GCA000560365_02646;product=hypothetical protein;Parent=GCA000560365_02646_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001177186.1,SO:0001217,UniParc:UPI00000D76CD,UniRef:UniRef100_Q2FV92,UniRef:UniRef50_Q2FV92,UniRef:UniRef90_Q2FV92
contig_1	Pyrodigal	gene	2673121	2674083	.	+	.	ID=GCA000560365_02647_gene;locus_tag=GCA000560365_02647;gene=rhaT
contig_1	Pyrodigal	CDS	2673121	2674083	.	+	0	ID=GCA000560365_02647;Name=EamA domain-containing protein;locus_tag=GCA000560365_02647;product=EamA domain-containing protein;gene=rhaT;Parent=GCA000560365_02647_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0697,COG:GER,SO:0001217,UniParc:UPI00000548AB,UniRef:UniRef100_A0A0D3QB51,UniRef:UniRef50_Q2FV91,UniRef:UniRef90_Q2FV91
contig_1	Pyrodigal	gene	2674165	2675133	.	-	.	ID=GCA000560365_02648_gene;locus_tag=GCA000560365_02648;gene=aes
contig_1	Pyrodigal	CDS	2674165	2675133	.	-	0	ID=GCA000560365_02648;Name=Alpha/beta hydrolase;locus_tag=GCA000560365_02648;product=Alpha/beta hydrolase;gene=aes;Parent=GCA000560365_02648_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0657,COG:I,RefSeq:WP_001228162.1,SO:0001217,UniParc:UPI00000548AC,UniRef:UniRef100_Q2FV90,UniRef:UniRef50_A0A3A3AIJ1,UniRef:UniRef90_A0A3A3AIJ1
contig_1	Pyrodigal	gene	2675266	2675610	.	-	.	ID=GCA000560365_02649_gene;locus_tag=GCA000560365_02649
contig_1	Pyrodigal	CDS	2675266	2675610	.	-	0	ID=GCA000560365_02649;Name=Thioredoxin domain-containing protein;locus_tag=GCA000560365_02649;product=Thioredoxin domain-containing protein;Parent=GCA000560365_02649_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000240662.1,SO:0001217,UniParc:UPI00000D9FFD,UniRef:UniRef100_Q2FV89,UniRef:UniRef50_Q2FV89,UniRef:UniRef90_Q2FV89
contig_1	Pyrodigal	gene	2675652	2676062	.	-	.	ID=GCA000560365_02650_gene;locus_tag=GCA000560365_02650;gene=fadM
contig_1	Pyrodigal	CDS	2675652	2676062	.	-	0	ID=GCA000560365_02650;Name=Acyl-CoA thioesterase;locus_tag=GCA000560365_02650;product=Acyl-CoA thioesterase;gene=fadM;Parent=GCA000560365_02650_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0824,COG:I,RefSeq:WP_000206033.1,SO:0001217,UniParc:UPI00000548B0,UniRef:UniRef100_Q2FV88,UniRef:UniRef50_Q2FV88,UniRef:UniRef90_Q2FV88
contig_1	Pyrodigal	gene	2676442	2678508	.	-	.	ID=GCA000560365_02651_gene;locus_tag=GCA000560365_02651;gene=glcB
contig_1	Pyrodigal	CDS	2676442	2678508	.	-	0	ID=GCA000560365_02651;Name=PTS system glucoside-specific EIICBA component;locus_tag=GCA000560365_02651;product=PTS system glucoside-specific EIICBA component;Dbxref=GO:0005886,GO:0008982,GO:0009401,GO:0016301,GO:0055056,GO:0090563,GO:1904659;gene=glcB;Parent=GCA000560365_02651_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2190,COG:G,RefSeq:WP_000473675.1,SO:0001217,UniParc:UPI00000D9FFE,UniRef:UniRef100_Q2FV87,UniRef:UniRef50_P20166,UniRef:UniRef90_Q2FV87
contig_1	Pyrodigal	gene	2678809	2680548	.	-	.	ID=GCA000560365_02652_gene;locus_tag=GCA000560365_02652;gene=ilvB
contig_1	Pyrodigal	CDS	2678809	2680548	.	-	0	ID=GCA000560365_02652;Name=pyruvate oxidase;locus_tag=GCA000560365_02652;product=pyruvate oxidase;Dbxref=GO:0000287,GO:0030976;gene=ilvB;Parent=GCA000560365_02652_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0028,COG:EH,KEGG:K00158,RefSeq:WP_001062658.1,SO:0001217,UniParc:UPI00000522A2,UniRef:UniRef100_Q2FV86,UniRef:UniRef50_A0A0D0QSZ0,UniRef:UniRef90_A0A142G9E0;ec_number=1.2.3.3
contig_1	Pyrodigal	gene	2680595	2681284	.	-	.	ID=GCA000560365_02653_gene;locus_tag=GCA000560365_02653;gene=cidB
contig_1	Pyrodigal	CDS	2680595	2681284	.	-	0	ID=GCA000560365_02653;Name=Holin-like protein CidB;locus_tag=GCA000560365_02653;product=Holin-like protein CidB;Dbxref=GO:0005886,GO:0031640;gene=cidB;Parent=GCA000560365_02653_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1346,COG:M,RefSeq:WP_001001019.1,SO:0001217,UniParc:UPI00000548B3,UniRef:UniRef100_P60639,UniRef:UniRef50_P60639,UniRef:UniRef90_P60639
contig_1	Pyrodigal	gene	2681277	2681672	.	-	.	ID=GCA000560365_02654_gene;locus_tag=GCA000560365_02654;gene=cidA
contig_1	Pyrodigal	CDS	2681277	2681672	.	-	0	ID=GCA000560365_02654;Name=holin-like murein hydrolase modulator CidA;locus_tag=GCA000560365_02654;product=holin-like murein hydrolase modulator CidA;Dbxref=GO:0005886,GO:0012501,GO:0019835,GO:0031640;gene=cidA;Parent=GCA000560365_02654_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000549734,COG:COG1380,COG:R,RefSeq:WP_000549734.1,SO:0001217,UniParc:UPI00000548B4,UniRef:UniRef100_P60647,UniRef:UniRef50_P60647,UniRef:UniRef90_P60647
contig_1	Pyrodigal	gene	2681885	2682748	.	-	.	ID=GCA000560365_02655_gene;locus_tag=GCA000560365_02655;gene=cidR
contig_1	Pyrodigal	CDS	2681885	2682748	.	-	0	ID=GCA000560365_02655;Name=cidABC operon transcriptional activator CidR;locus_tag=GCA000560365_02655;product=cidABC operon transcriptional activator CidR;gene=cidR;Parent=GCA000560365_02655_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0583,COG:K,SO:0001217,UniParc:UPI0001E0716E,UniRef:UniRef100_Q2FV83,UniRef:UniRef50_Q2FV83,UniRef:UniRef90_Q2FV83
contig_1	Pyrodigal	gene	2682930	2683148	.	+	.	ID=GCA000560365_02656_gene;locus_tag=GCA000560365_02656;gene=yozE
contig_1	Pyrodigal	CDS	2682930	2683148	.	+	0	ID=GCA000560365_02656;Name=YozE SAM-like domain-containing protein;locus_tag=GCA000560365_02656;product=YozE SAM-like domain-containing protein;gene=yozE;Parent=GCA000560365_02656_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000011687.1,SO:0001217,UniParc:UPI00000D775E,UniRef:UniRef100_Q2FV82,UniRef:UniRef50_Q2FV82,UniRef:UniRef90_Q2FV82
contig_1	Infernal	gene	2683158	2683210	.	+	.	ID=GCA000560365_02657_gene;locus_tag=GCA000560365_02657;gene=sau-6072
contig_1	Infernal	ncRNA	2683158	2683210	1.4e-16	+	.	ID=GCA000560365_02657;Name=Staphylococcus sRNA sau-6072;locus_tag=GCA000560365_02657;product=Staphylococcus sRNA sau-6072;Dbxref=RFAM:RF02398;Parent=GCA000560365_02657_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02398
contig_1	Pyrodigal	gene	2683537	2683968	.	+	.	ID=GCA000560365_02658_gene;locus_tag=GCA000560365_02658;gene=lysM
contig_1	Pyrodigal	CDS	2683537	2683968	.	+	0	ID=GCA000560365_02658;Name=LysM domain protein;locus_tag=GCA000560365_02658;product=LysM domain protein;gene=lysM;Parent=GCA000560365_02658_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3942,COG:M,RefSeq:WP_000455861.1,SO:0001217,UniParc:UPI00000548B8,UniRef:UniRef100_Q2FV81,UniRef:UniRef50_Q2FV81,UniRef:UniRef90_Q2FV81
contig_1	Pyrodigal	gene	2684728	2684985	.	-	.	ID=GCA000560365_02659_gene;locus_tag=GCA000560365_02659
contig_1	Pyrodigal	CDS	2684728	2684985	.	-	0	ID=GCA000560365_02659;Name=hypothetical protein;locus_tag=GCA000560365_02659;product=hypothetical protein;Parent=GCA000560365_02659_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000402605.1,SO:0001217,UniParc:UPI00004B5CF4,UniRef:UniRef100_Q2FV78,UniRef:UniRef50_Q2FV78,UniRef:UniRef90_Q2FV78
contig_1	Pyrodigal	gene	2685564	2686841	.	-	.	ID=GCA000560365_02660_gene;locus_tag=GCA000560365_02660;gene=hMG1
contig_1	Pyrodigal	CDS	2685564	2686841	.	-	0	ID=GCA000560365_02660;Name=hydroxymethylglutaryl-CoA reductase%2C degradative;locus_tag=GCA000560365_02660;product=hydroxymethylglutaryl-CoA reductase%2C degradative;Dbxref=GO:0004420,GO:0015936,GO:0016616;gene=hMG1;Parent=GCA000560365_02660_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1257,COG:I,KEGG:K00054,RefSeq:WP_001180323.1,SO:0001217,UniParc:UPI00000548BC,UniRef:UniRef100_Q2FV77,UniRef:UniRef50_B9DLB2,UniRef:UniRef90_A0A641A7V3;ec_number=1.1.1.88
contig_1	Pyrodigal	gene	2687095	2688261	.	+	.	ID=GCA000560365_02661_gene;locus_tag=GCA000560365_02661;gene=pksG
contig_1	Pyrodigal	CDS	2687095	2688261	.	+	0	ID=GCA000560365_02661;Name=hydroxymethylglutaryl-CoA synthase;locus_tag=GCA000560365_02661;product=hydroxymethylglutaryl-CoA synthase;Dbxref=GO:0004421;gene=pksG;Parent=GCA000560365_02661_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3425,COG:I,KEGG:K01641,RefSeq:WP_000151982.1,SO:0001217,UniParc:UPI00000548BD,UniRef:UniRef100_Q2FV76,UniRef:UniRef50_R3WMN8,UniRef:UniRef90_A0A2S6D8I9;ec_number=2.3.3.10
contig_1	Pyrodigal	gene	2688431	2688952	.	-	.	ID=GCA000560365_02662_gene;locus_tag=GCA000560365_02662;gene=adaB
contig_1	Pyrodigal	CDS	2688431	2688952	.	-	0	ID=GCA000560365_02662;Name=Methylated-DNA--protein-cysteine methyltransferase;locus_tag=GCA000560365_02662;product=Methylated-DNA--protein-cysteine methyltransferase;gene=adaB;Parent=GCA000560365_02662_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0350,COG:L,RefSeq:WP_000455987.1,SO:0001217,UniParc:UPI00000548BE,UniRef:UniRef100_Q2FV75,UniRef:UniRef50_A0A3A5LJI7,UniRef:UniRef90_A0A3A5LJI7
contig_1	Pyrodigal	gene	2689361	2691466	.	+	.	ID=GCA000560365_02663_gene;locus_tag=GCA000560365_02663;gene=clpL
contig_1	Pyrodigal	CDS	2689361	2691466	.	+	0	ID=GCA000560365_02663;Name=ATP-dependent Clp protease ATP-binding subunit ClpL;locus_tag=GCA000560365_02663;product=ATP-dependent Clp protease ATP-binding subunit ClpL;Dbxref=GO:0005524,GO:0005737,GO:0016887,GO:0034605;gene=clpL;Parent=GCA000560365_02663_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001058981,COG:COG0542,COG:O,KEGG:K04086,RefSeq:WP_001058981.1,SO:0001217,UniParc:UPI00000548BF,UniRef:UniRef100_Q2FV74,UniRef:UniRef50_Q2FV74,UniRef:UniRef90_Q2FV74
contig_1	Pyrodigal	gene	2691535	2691705	.	-	.	ID=GCA000560365_02664_gene;locus_tag=GCA000560365_02664
contig_1	Pyrodigal	CDS	2691535	2691705	.	-	0	ID=GCA000560365_02664;Name=FeoB-associated Cys-rich membrane protein;locus_tag=GCA000560365_02664;product=FeoB-associated Cys-rich membrane protein;Parent=GCA000560365_02664_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000111118.1,SO:0001217,UniParc:UPI00000DA004,UniRef:UniRef100_Q2FV73,UniRef:UniRef50_Q2FV73,UniRef:UniRef90_Q2FV73
contig_1	Pyrodigal	gene	2691718	2693712	.	-	.	ID=GCA000560365_02665_gene;locus_tag=GCA000560365_02665;gene=feoB
contig_1	Pyrodigal	CDS	2691718	2693712	.	-	0	ID=GCA000560365_02665;Name=ferrous iron transport protein B;locus_tag=GCA000560365_02665;product=ferrous iron transport protein B;Dbxref=GO:0005525,GO:0005886,GO:0006826,GO:0015093,GO:0016020;gene=feoB;Parent=GCA000560365_02665_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0370,COG:P,RefSeq:WP_000432907.1,SO:0001217,UniParc:UPI00004B5CF5,UniRef:UniRef100_Q5HD01,UniRef:UniRef50_Q99R86,UniRef:UniRef90_Q99R86
contig_1	Pyrodigal	gene	2693724	2693951	.	-	.	ID=GCA000560365_02666_gene;locus_tag=GCA000560365_02666;gene=feoA
contig_1	Pyrodigal	CDS	2693724	2693951	.	-	0	ID=GCA000560365_02666;Name=Ferrous iron transporter FeoA-like domain-containing protein;locus_tag=GCA000560365_02666;product=Ferrous iron transporter FeoA-like domain-containing protein;gene=feoA;Parent=GCA000560365_02666_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1918,COG:P,RefSeq:WP_000932073.1,SO:0001217,UniParc:UPI00000548C1,UniRef:UniRef100_Q2FV71,UniRef:UniRef50_Q2FV71,UniRef:UniRef90_Q2FV71
contig_1	Pyrodigal	gene	2694167	2696656	.	-	.	ID=GCA000560365_02667_gene;locus_tag=GCA000560365_02667;gene=farE
contig_1	Pyrodigal	CDS	2694167	2696656	.	-	0	ID=GCA000560365_02667;Name=fatty acid efflux MMPL transporter FarE;locus_tag=GCA000560365_02667;product=fatty acid efflux MMPL transporter FarE;gene=farE;Parent=GCA000560365_02667_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001051413,COG:COG2409,COG:R,RefSeq:WP_001051428.1,SO:0001217,UniParc:UPI0001D0CD53,UniRef:UniRef100_A0A6B0DA92,UniRef:UniRef50_A0A2A4GX54,UniRef:UniRef90_A0A122EMC8
contig_1	Pyrodigal	gene	2696801	2697349	.	+	.	ID=GCA000560365_02668_gene;locus_tag=GCA000560365_02668;gene=farR
contig_1	Pyrodigal	CDS	2696801	2697349	.	+	0	ID=GCA000560365_02668;Name=fatty acid efflux pump transcriptional regulator FarR;locus_tag=GCA000560365_02668;product=fatty acid efflux pump transcriptional regulator FarR;gene=farR;Parent=GCA000560365_02668_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000665241,COG:COG1309,COG:K,RefSeq:WP_000665238.1,SO:0001217,UniParc:UPI00000548C4,UniRef:UniRef100_Q2FV69,UniRef:UniRef50_Q2FV69,UniRef:UniRef90_Q2FV69
contig_1	Pyrodigal	gene	2697705	2699249	.	-	.	ID=GCA000560365_02669_gene;locus_tag=GCA000560365_02669;gene=pruA
contig_1	Pyrodigal	CDS	2697705	2699249	.	-	0	ID=GCA000560365_02669;Name=L-glutamate gamma-semialdehyde dehydrogenase;locus_tag=GCA000560365_02669;product=L-glutamate gamma-semialdehyde dehydrogenase;Dbxref=GO:0003842,GO:0006537,GO:0006562,GO:0009898,GO:0010133;gene=pruA;Parent=GCA000560365_02669_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1012,COG:I,KEGG:K00294,RefSeq:WP_000259692.1,SO:0001217,UniParc:UPI00000CA9A3,UniRef:UniRef100_Q2FV67,UniRef:UniRef50_P94391,UniRef:UniRef90_Q2FV67;ec_number=1.2.1.88
contig_1	Pyrodigal	gene	2699439	2700038	.	-	.	ID=GCA000560365_02670_gene;locus_tag=GCA000560365_02670;gene=wbbJ
contig_1	Pyrodigal	CDS	2699439	2700038	.	-	0	ID=GCA000560365_02670;Name=Putative acetyltransferase SAS2441;locus_tag=GCA000560365_02670;product=Putative acetyltransferase SAS2441;Dbxref=GO:0008870;gene=wbbJ;Parent=GCA000560365_02670_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0110,COG:R,KEGG:K00661,RefSeq:WP_000136500.1,SO:0001217,UniParc:UPI00000DA009,UniRef:UniRef100_Q5HCZ5,UniRef:UniRef50_Q5HCZ5,UniRef:UniRef90_Q5HCZ5;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	2700277	2700468	.	+	.	ID=GCA000560365_02671_gene;locus_tag=GCA000560365_02671;gene=cwrA
contig_1	Pyrodigal	CDS	2700277	2700468	.	+	0	ID=GCA000560365_02671;Name=cell wall inhibition responsive protein CwrA;locus_tag=GCA000560365_02671;product=cell wall inhibition responsive protein CwrA;gene=cwrA;Parent=GCA000560365_02671_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001221404,RefSeq:WP_001221404.1,SO:0001217,UniParc:UPI00000CAA05,UniRef:UniRef100_Q2FV65,UniRef:UniRef50_A0AAE3D5F7,UniRef:UniRef90_A0AAE3D5F7
contig_1	Pyrodigal	gene	2700708	2703116	.	+	.	ID=GCA000560365_02672_gene;locus_tag=GCA000560365_02672;gene=copZ
contig_1	Pyrodigal	CDS	2700708	2703116	.	+	0	ID=GCA000560365_02672;Name=copper chaperone CopZ;locus_tag=GCA000560365_02672;product=copper chaperone CopZ;Dbxref=GO:0005507,GO:0005524,GO:0005886,GO:0016887,GO:0043682,GO:0046872,GO:0055070,GO:0140581;gene=copZ;Parent=GCA000560365_02672_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2217,COG:P,RefSeq:WP_000024128.1,SO:0001217,UniParc:UPI0000696CE7,UniRef:UniRef100_Q2FDV0,UniRef:UniRef50_Q2FV64,UniRef:UniRef90_Q2FV64;ec_number=7.2.2.8
contig_1	Pyrodigal	gene	2703545	2703751	.	+	.	ID=GCA000560365_02673_gene;locus_tag=GCA000560365_02673;gene=copZ
contig_1	Pyrodigal	CDS	2703545	2703751	.	+	0	ID=GCA000560365_02673;Name=copper chaperone CopZ;locus_tag=GCA000560365_02673;product=copper chaperone CopZ;Dbxref=GO:0005507,GO:0005737;gene=copZ;Parent=GCA000560365_02673_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2608,COG:P,RefSeq:WP_000076661.1,SO:0001217,UniParc:UPI00000D7866,UniRef:UniRef100_Q2FV63,UniRef:UniRef50_Q2FV63,UniRef:UniRef90_Q2FV63
contig_1	Pyrodigal	gene	2703841	2704839	.	-	.	ID=GCA000560365_02674_gene;locus_tag=GCA000560365_02674;gene=ldhA
contig_1	Pyrodigal	CDS	2703841	2704839	.	-	0	ID=GCA000560365_02674;Name=D-lactate dehydrogenase;locus_tag=GCA000560365_02674;product=D-lactate dehydrogenase;gene=ldhA;Parent=GCA000560365_02674_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CHR,COG:COG1052,RefSeq:WP_000161358.1,SO:0001217,UniParc:UPI00004B5CF9,UniRef:UniRef100_Q2FV62,UniRef:UniRef50_A0A658WNB1,UniRef:UniRef90_A0A658WNB1
contig_1	Pyrodigal	gene	2704862	2706016	.	-	.	ID=GCA000560365_02675_gene;locus_tag=GCA000560365_02675;gene=aspB
contig_1	Pyrodigal	CDS	2704862	2706016	.	-	0	ID=GCA000560365_02675;Name=Aminotransferase;locus_tag=GCA000560365_02675;product=Aminotransferase;gene=aspB;Parent=GCA000560365_02675_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0436,COG:E,RefSeq:WP_000625059.1,SO:0001217,UniParc:UPI00004B5CFA,UniRef:UniRef100_Q2FV61,UniRef:UniRef50_A0A2I7YAX0,UniRef:UniRef90_A0A2I7YAX0
contig_1	Pyrodigal	gene	2706443	2707951	.	-	.	ID=GCA000560365_02676_gene;locus_tag=GCA000560365_02676;gene=crtN
contig_1	Pyrodigal	CDS	2706443	2707951	.	-	0	ID=GCA000560365_02676;Name=4%2C4'-diapophytoene desaturase (4%2C4'-diaponeurosporene-forming);locus_tag=GCA000560365_02676;product=4%2C4'-diapophytoene desaturase (4%2C4'-diaponeurosporene-forming);Dbxref=GO:0016117,GO:0102223;gene=crtN;Parent=GCA000560365_02676_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1233,COG:Q,RefSeq:WP_000686168.1,SO:0001217,UniParc:UPI00000548CF,UniRef:UniRef100_Q2FV60,UniRef:UniRef50_Q2FV60,UniRef:UniRef90_Q2FV60;ec_number=1.3.8.-
contig_1	Pyrodigal	gene	2707963	2708826	.	-	.	ID=GCA000560365_02677_gene;locus_tag=GCA000560365_02677;gene=crtM
contig_1	Pyrodigal	CDS	2707963	2708826	.	-	0	ID=GCA000560365_02677;Name=4%2C4'-diapophytoene synthase;locus_tag=GCA000560365_02677;product=4%2C4'-diapophytoene synthase;Dbxref=GO:0004311,GO:0016117,GO:0046872,GO:0051996;gene=crtM;Parent=GCA000560365_02677_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1562,COG:I,RefSeq:WP_031808158.1,SO:0001217,UniParc:UPI00044DF68C,UniRef:UniRef100_UPI00044DF68C,UniRef:UniRef50_Q2FV59,UniRef:UniRef90_Q2FV59;ec_number=2.5.1.96
contig_1	Pyrodigal	gene	2708863	2709990	.	-	.	ID=GCA000560365_02678_gene;locus_tag=GCA000560365_02678;gene=crtQ
contig_1	Pyrodigal	CDS	2708863	2709990	.	-	0	ID=GCA000560365_02678;Name=4%2C4'-diaponeurosporenoate glycosyltransferase;locus_tag=GCA000560365_02678;product=4%2C4'-diaponeurosporenoate glycosyltransferase;Dbxref=GO:0005886,GO:0016117,GO:0016757;gene=crtQ;Parent=GCA000560365_02678_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000871731,COG:COG0463,COG:M,KEGG:K10211,RefSeq:WP_000871731.1,SO:0001217,UniParc:UPI00000DA010,UniRef:UniRef100_Q2FV58,UniRef:UniRef50_Q2FV58,UniRef:UniRef90_Q2FV58;ec_number=2.4.1.-
contig_1	Pyrodigal	gene	2709996	2711489	.	-	.	ID=GCA000560365_02679_gene;locus_tag=GCA000560365_02679;gene=crtP
contig_1	Pyrodigal	CDS	2709996	2711489	.	-	0	ID=GCA000560365_02679;Name=4%2C4'-diaponeurosporene oxygenase;locus_tag=GCA000560365_02679;product=4%2C4'-diaponeurosporene oxygenase;Dbxref=GO:0016117,GO:0016491;gene=crtP;Parent=GCA000560365_02679_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1233,COG:Q,KEGG:K10210,RefSeq:WP_000160456.1,SO:0001217,UniParc:UPI00004B5CFD,UniRef:UniRef100_Q2FV57,UniRef:UniRef50_Q4VKU9,UniRef:UniRef90_Q2FV57;ec_number=1.14.99.-
contig_1	Pyrodigal	gene	2711482	2711979	.	-	.	ID=GCA000560365_02680_gene;locus_tag=GCA000560365_02680;gene=crtO
contig_1	Pyrodigal	CDS	2711482	2711979	.	-	0	ID=GCA000560365_02680;Name=glycosyl-4%2C4'-diaponeurosporenoate acyltransferase;locus_tag=GCA000560365_02680;product=glycosyl-4%2C4'-diaponeurosporenoate acyltransferase;Dbxref=GO:0005886,GO:0016117,GO:0016746;gene=crtO;Parent=GCA000560365_02680_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000855549,KEGG:K10212,SO:0001217,UniParc:UPI00000548D3,UniRef:UniRef100_Q2FV56,UniRef:UniRef50_Q53588,UniRef:UniRef90_Q53588;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	2712145	2712912	.	-	.	ID=GCA000560365_02681_gene;locus_tag=GCA000560365_02681;gene=ssaA
contig_1	Pyrodigal	CDS	2712145	2712912	.	-	0	ID=GCA000560365_02681;Name=Staphylococcal secretory antigen SsaA;locus_tag=GCA000560365_02681;product=Staphylococcal secretory antigen SsaA;Dbxref=GO:0005576;gene=ssaA;Parent=GCA000560365_02681_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3942,COG:M,RefSeq:WP_000725225.1,SO:0001217,UniParc:UPI00000D7806,UniRef:UniRef100_Q2FV55,UniRef:UniRef50_Q2G2J2,UniRef:UniRef90_Q2FV55
contig_1	Pyrodigal	gene	2713273	2715084	.	-	.	ID=GCA000560365_02682_gene;locus_tag=GCA000560365_02682;gene=oatA
contig_1	Pyrodigal	CDS	2713273	2715084	.	-	0	ID=GCA000560365_02682;Name=O-acetyltransferase OatA;locus_tag=GCA000560365_02682;product=O-acetyltransferase OatA;Dbxref=GO:0005886,GO:0009103,GO:0016747;gene=oatA;Parent=GCA000560365_02682_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1835,COG:M,RefSeq:WP_000379821.1,SO:0001217,UniParc:UPI00000548D5,UniRef:UniRef100_Q2FV54,UniRef:UniRef50_Q2FV54,UniRef:UniRef90_Q2FV54;ec_number=2.3.1.-
contig_1	Pyrodigal	gene	2715595	2715837	.	-	.	ID=GCA000560365_02683_gene;locus_tag=GCA000560365_02683
contig_1	Pyrodigal	CDS	2715595	2715837	.	-	0	ID=GCA000560365_02683;Name=GNAT family N-acetyltransferase;locus_tag=GCA000560365_02683;product=GNAT family N-acetyltransferase;Parent=GCA000560365_02683_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_UPI0012B014AC,UniRef:UniRef90_UPI0012B014AC
contig_1	Pyrodigal	gene	2715807	2716082	.	-	.	ID=GCA000560365_02684_gene;locus_tag=GCA000560365_02684;pseudogene=unitary
contig_1	Pyrodigal	CDS	2715807	2716082	.	-	0	ID=GCA000560365_02684;Name=Acetyltransferase%2C GNAT family;locus_tag=GCA000560365_02684;product=Acetyltransferase%2C GNAT family;pseudogene=unitary;Parent=GCA000560365_02684_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_Q2FV53,UniRef:UniRef90_A0A380DPU9
contig_1	Pyrodigal	gene	2716358	2717059	.	-	.	ID=GCA000560365_02685_gene;locus_tag=GCA000560365_02685;gene=isaA
contig_1	Pyrodigal	CDS	2716358	2717059	.	-	0	ID=GCA000560365_02685;Name=lytic transglycosylase IsaA;locus_tag=GCA000560365_02685;product=lytic transglycosylase IsaA;Dbxref=GO:0005576,GO:0016798;gene=isaA;Parent=GCA000560365_02685_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000751267,RefSeq:WP_000751267.1,SO:0001217,UniParc:UPI0000052252,UniRef:UniRef100_Q2FV52,UniRef:UniRef50_Q2FV52,UniRef:UniRef90_Q2FV52;ec_number=3.2.-.-
contig_1	Pyrodigal	gene	2717667	2718722	.	-	.	ID=GCA000560365_02686_gene;locus_tag=GCA000560365_02686;gene=pfoR
contig_1	Pyrodigal	CDS	2717667	2718722	.	-	0	ID=GCA000560365_02686;Name=Phosphotransferase system EIIC domain-containing protein;locus_tag=GCA000560365_02686;product=Phosphotransferase system EIIC domain-containing protein;gene=pfoR;Parent=GCA000560365_02686_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3641,COG:T,KEGG:K07035,RefSeq:WP_000200684.1,SO:0001217,UniParc:UPI00000CAA88,UniRef:UniRef100_Q2FV51,UniRef:UniRef50_Q2FV51,UniRef:UniRef90_Q2FV51
contig_1	Pyrodigal	gene	2719114	2719701	.	+	.	ID=GCA000560365_02687_gene;locus_tag=GCA000560365_02687;gene=acrR
contig_1	Pyrodigal	CDS	2719114	2719701	.	+	0	ID=GCA000560365_02687;Name=HTH tetR-type domain-containing protein;locus_tag=GCA000560365_02687;product=HTH tetR-type domain-containing protein;gene=acrR;Parent=GCA000560365_02687_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1309,COG:K,SO:0001217,UniParc:UPI00006E4543,UniRef:UniRef100_A0A0H2WZJ2,UniRef:UniRef50_Q2FV48,UniRef:UniRef90_Q2FV48
contig_1	Pyrodigal	gene	2720079	2720399	.	+	.	ID=GCA000560365_02688_gene;locus_tag=GCA000560365_02688;pseudogene=unitary
contig_1	Pyrodigal	CDS	2720079	2720399	.	+	0	ID=GCA000560365_02688;Name=hypothetical protein;locus_tag=GCA000560365_02688;product=hypothetical protein;pseudogene=unitary;Parent=GCA000560365_02688_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000CAE03,UniRef:UniRef100_A0A1Q8R4W5,UniRef:UniRef50_A0A0H3K4R4,UniRef:UniRef50_Q2FV47,UniRef:UniRef90_A0A1Q8R4W5,UniRef:UniRef90_Q2FV47
contig_1	Pyrodigal	gene	2720619	2720849	.	+	.	ID=GCA000560365_02689_gene;locus_tag=GCA000560365_02689;gene=ynzC
contig_1	Pyrodigal	CDS	2720619	2720849	.	+	0	ID=GCA000560365_02689;Name=UPF0291 protein SAR2654;locus_tag=GCA000560365_02689;product=UPF0291 protein SAR2654;Dbxref=GO:0005737;gene=ynzC;Parent=GCA000560365_02689_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4224,COG:S,RefSeq:WP_000697134.1,SO:0001217,UniParc:UPI00000548DD,UniRef:UniRef100_P60077,UniRef:UniRef50_P60077,UniRef:UniRef90_P60077
contig_1	Pyrodigal	gene	2720999	2721376	.	-	.	ID=GCA000560365_02690_gene;locus_tag=GCA000560365_02690
contig_1	Pyrodigal	CDS	2720999	2721376	.	-	0	ID=GCA000560365_02690;Name=VOC domain-containing protein;locus_tag=GCA000560365_02690;product=VOC domain-containing protein;Parent=GCA000560365_02690_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000616227.1,SO:0001217,UniParc:UPI00000DA015,UniRef:UniRef100_Q2FV45,UniRef:UniRef50_Q2FV45,UniRef:UniRef90_Q2FV45
contig_1	Pyrodigal	gene	2721393	2722214	.	-	.	ID=GCA000560365_02691_gene;locus_tag=GCA000560365_02691;gene=ybjT
contig_1	Pyrodigal	CDS	2721393	2722214	.	-	0	ID=GCA000560365_02691;Name=NAD dependent epimerase/dehydratase family protein;locus_tag=GCA000560365_02691;product=NAD dependent epimerase/dehydratase family protein;gene=ybjT;Parent=GCA000560365_02691_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0702,COG:R,RefSeq:WP_000651837.1,SO:0001217,UniParc:UPI00000548DF,UniRef:UniRef100_Q2FV44,UniRef:UniRef50_A0A380FXE5,UniRef:UniRef90_A0A2S6D292
contig_1	Pyrodigal	gene	2722234	2722533	.	-	.	ID=GCA000560365_02692_gene;locus_tag=GCA000560365_02692
contig_1	Pyrodigal	CDS	2722234	2722533	.	-	0	ID=GCA000560365_02692;Name=DUF2316 domain-containing protein;locus_tag=GCA000560365_02692;product=DUF2316 domain-containing protein;Parent=GCA000560365_02692_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4367,COG:S,RefSeq:WP_000055846.1,SO:0001217,UniParc:UPI00004B5D01,UniRef:UniRef100_Q2FV43,UniRef:UniRef50_Q2FV43,UniRef:UniRef90_Q2FV43
contig_1	Pyrodigal	gene	2722664	2723221	.	+	.	ID=GCA000560365_02693_gene;locus_tag=GCA000560365_02693;gene=acrR
contig_1	Pyrodigal	CDS	2722664	2723221	.	+	0	ID=GCA000560365_02693;Name=HTH-type transcriptional regulator SACOL2593;locus_tag=GCA000560365_02693;product=HTH-type transcriptional regulator SACOL2593;Dbxref=GO:0003677;gene=acrR;Parent=GCA000560365_02693_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1309,COG:K,RefSeq:WP_001224188.1,SO:0001217,UniParc:UPI00000548E2,UniRef:UniRef100_Q2FV42,UniRef:UniRef50_Q2FV42,UniRef:UniRef90_Q2FV42
contig_1	Pyrodigal	gene	2723214	2723918	.	+	.	ID=GCA000560365_02694_gene;locus_tag=GCA000560365_02694;gene=fabG
contig_1	Pyrodigal	CDS	2723214	2723918	.	+	0	ID=GCA000560365_02694;Name=KR domain-containing protein;locus_tag=GCA000560365_02694;product=KR domain-containing protein;gene=fabG;Parent=GCA000560365_02694_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1028,COG:I,RefSeq:WP_000161829.1,SO:0001217,UniParc:UPI00000D7815,UniRef:UniRef100_Q2FV41,UniRef:UniRef50_A0A2K4AHE4,UniRef:UniRef90_A0A2K4AHE4
contig_1	Pyrodigal	gene	2724016	2725026	.	+	.	ID=GCA000560365_02695_gene;locus_tag=GCA000560365_02695;gene=ligW
contig_1	Pyrodigal	CDS	2724016	2725026	.	+	0	ID=GCA000560365_02695;Name=Amidohydrolase-related domain-containing protein;locus_tag=GCA000560365_02695;product=Amidohydrolase-related domain-containing protein;gene=ligW;Parent=GCA000560365_02695_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2159,COG:G,RefSeq:WP_000836419.1,SO:0001217,UniParc:UPI0000696CE9,UniRef:UniRef100_A0A0D6HPN7,UniRef:UniRef50_Q2FV40,UniRef:UniRef90_Q2FV40
contig_1	Pyrodigal	gene	2725046	2725876	.	+	.	ID=GCA000560365_02696_gene;locus_tag=GCA000560365_02696;gene=menH
contig_1	Pyrodigal	CDS	2725046	2725876	.	+	0	ID=GCA000560365_02696;Name=putative hydrolase SA2367;locus_tag=GCA000560365_02696;product=putative hydrolase SA2367;Dbxref=GO:0016020,GO:0016787;gene=menH;Parent=GCA000560365_02696_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0596,COG:HR,RefSeq:WP_000448901.1,SO:0001217,UniParc:UPI0000696CEA,UniRef:UniRef100_Q2FDS6,UniRef:UniRef50_Q2FDS6,UniRef:UniRef90_Q2FDS6;ec_number=3.-.-.-
contig_1	Pyrodigal	gene	2726023	2726913	.	-	.	ID=GCA000560365_02697_gene;locus_tag=GCA000560365_02697;gene=yejR
contig_1	Pyrodigal	CDS	2726023	2726913	.	-	0	ID=GCA000560365_02697;Name=GTP-binding protein;locus_tag=GCA000560365_02697;product=GTP-binding protein;gene=yejR;Parent=GCA000560365_02697_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0523,COG:R,RefSeq:WP_000706519.1,SO:0001217,UniParc:UPI00000548E6,UniRef:UniRef100_Q2FV38,UniRef:UniRef50_L7STG1,UniRef:UniRef90_Q2FV38
contig_1	Pyrodigal	gene	2727011	2728351	.	-	.	ID=GCA000560365_02698_gene;locus_tag=GCA000560365_02698;gene=feoB
contig_1	Pyrodigal	CDS	2727011	2728351	.	-	0	ID=GCA000560365_02698;Name=Ferrous iron transport protein B;locus_tag=GCA000560365_02698;product=Ferrous iron transport protein B;gene=feoB;Parent=GCA000560365_02698_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0370,COG:P,RefSeq:WP_000895195.1,SO:0001217,UniParc:UPI00000DA01A,UniRef:UniRef100_A0A2C9TPH8,UniRef:UniRef50_B9DL78,UniRef:UniRef90_A0A077UMB4
contig_1	Pyrodigal	gene	2728345	2729451	.	-	.	ID=GCA000560365_02699_gene;locus_tag=GCA000560365_02699;gene=trxB
contig_1	Pyrodigal	CDS	2728345	2729451	.	-	0	ID=GCA000560365_02699;Name=Putative flavoprotein monooxygenase;locus_tag=GCA000560365_02699;product=Putative flavoprotein monooxygenase;Dbxref=GO:0004497,GO:0050660;gene=trxB;Parent=GCA000560365_02699_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0492,COG:O,RefSeq:WP_001163751.1,SO:0001217,UniParc:UPI00000548E9,UniRef:UniRef100_Q2FV35,UniRef:UniRef50_Q99R54,UniRef:UniRef90_Q99R54;ec_number=1.-.-.-
contig_1	Pyrodigal	gene	2729785	2730081	.	-	.	ID=GCA000560365_02700_gene;locus_tag=GCA000560365_02700
contig_1	Pyrodigal	CDS	2729785	2730081	.	-	0	ID=GCA000560365_02700;Name=DUF4176 domain-containing protein;locus_tag=GCA000560365_02700;product=DUF4176 domain-containing protein;Parent=GCA000560365_02700_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4495,COG:S,RefSeq:WP_000447710.1,SO:0001217,UniParc:UPI00000548EA,UniRef:UniRef100_Q2FV34,UniRef:UniRef50_Q2FV34,UniRef:UniRef90_Q2FV34
contig_1	Pyrodigal	gene	2730069	2730440	.	-	.	ID=GCA000560365_02701_gene;locus_tag=GCA000560365_02701
contig_1	Pyrodigal	CDS	2730069	2730440	.	-	0	ID=GCA000560365_02701;Name=hypothetical protein;locus_tag=GCA000560365_02701;product=hypothetical protein;Parent=GCA000560365_02701_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000548EC,UniRef:UniRef100_A0A133Q112,UniRef:UniRef50_A0A6A9GUL6,UniRef:UniRef90_A0A6A9GUL6
contig_1	Pyrodigal	gene	2730452	2730730	.	-	.	ID=GCA000560365_02702_gene;locus_tag=GCA000560365_02702
contig_1	Pyrodigal	CDS	2730452	2730730	.	-	0	ID=GCA000560365_02702;Name=TIGR04197 family type VII secretion effector;locus_tag=GCA000560365_02702;product=TIGR04197 family type VII secretion effector;Parent=GCA000560365_02702_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000987949.1,SO:0001217,UniParc:UPI00000548ED,UniRef:UniRef100_Q2FV32,UniRef:UniRef50_Q2FV32,UniRef:UniRef90_Q2FV32
contig_1	Pyrodigal	gene	2731072	2731938	.	-	.	ID=GCA000560365_02703_gene;locus_tag=GCA000560365_02703;gene=fN3K
contig_1	Pyrodigal	CDS	2731072	2731938	.	-	0	ID=GCA000560365_02703;Name=putative ketoamine kinase SAOUHSC_02908;locus_tag=GCA000560365_02703;product=putative ketoamine kinase SAOUHSC_02908;Dbxref=GO:0005524,GO:0016301,GO:0016773,GO:0102193;gene=fN3K;Parent=GCA000560365_02703_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3001,COG:G,RefSeq:WP_001005511.1,SO:0001217,UniParc:UPI0000696CEB,UniRef:UniRef100_Q2FV31,UniRef:UniRef50_Q2FV31,UniRef:UniRef90_Q2FV31;ec_number=2.7.1.-
contig_1	Pyrodigal	gene	2732156	2733220	.	+	.	ID=GCA000560365_02704_gene;locus_tag=GCA000560365_02704;gene=pyrD
contig_1	Pyrodigal	CDS	2732156	2733220	.	+	0	ID=GCA000560365_02704;Name=quinone-dependent dihydroorotate dehydrogenase;locus_tag=GCA000560365_02704;product=quinone-dependent dihydroorotate dehydrogenase;gene=pyrD;Parent=GCA000560365_02704_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0167,COG:F,RefSeq:WP_000277415.1,SO:0001217,UniParc:UPI00000548EF,UniRef:UniRef100_Q2FV30,UniRef:UniRef50_Q2FV30,UniRef:UniRef90_Q2FV30;ec_number=1.3.5.2
contig_1	Pyrodigal	gene	2733375	2733650	.	+	.	ID=GCA000560365_02705_gene;locus_tag=GCA000560365_02705
contig_1	Pyrodigal	CDS	2733375	2733650	.	+	0	ID=GCA000560365_02705;Name=Transmembrane protein;locus_tag=GCA000560365_02705;product=Transmembrane protein;Parent=GCA000560365_02705_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000159837.1,SO:0001217,UniParc:UPI00000548F0,UniRef:UniRef100_Q2FV29,UniRef:UniRef50_A0A654C2I8,UniRef:UniRef90_Q2FV29
contig_1	Pyrodigal	gene	2733836	2734558	.	-	.	ID=GCA000560365_02706_gene;locus_tag=GCA000560365_02706;gene=queH
contig_1	Pyrodigal	CDS	2733836	2734558	.	-	0	ID=GCA000560365_02706;Name=Epoxyqueuosine reductase QueH;locus_tag=GCA000560365_02706;product=Epoxyqueuosine reductase QueH;Dbxref=GO:0006400,GO:0008616,GO:0046872,GO:0051539,GO:0052693;gene=queH;Parent=GCA000560365_02706_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1636,COG:J,KEGG:K09765,RefSeq:WP_000606210.1,SO:0001217,UniParc:UPI00000548F1,UniRef:UniRef100_A0A0H3JUG6,UniRef:UniRef50_Q9A1K3,UniRef:UniRef90_A0A0H3JUG6;ec_number=1.17.99.6
contig_1	Pyrodigal	gene	2734912	2735361	.	+	.	ID=GCA000560365_02707_gene;locus_tag=GCA000560365_02707;gene=phnB
contig_1	Pyrodigal	CDS	2734912	2735361	.	+	0	ID=GCA000560365_02707;Name=PhnB-like domain-containing protein;locus_tag=GCA000560365_02707;product=PhnB-like domain-containing protein;gene=phnB;Parent=GCA000560365_02707_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG2764,RefSeq:WP_000125708.1,SO:0001217,UniParc:UPI00004B5D08,UniRef:UniRef100_Q2FV27,UniRef:UniRef50_Q2FV27,UniRef:UniRef90_Q2FV27
contig_1	Pyrodigal	gene	2735442	2736029	.	-	.	ID=GCA000560365_02708_gene;locus_tag=GCA000560365_02708;gene=acrR
contig_1	Pyrodigal	CDS	2735442	2736029	.	-	0	ID=GCA000560365_02708;Name=HTH tetR-type domain-containing protein;locus_tag=GCA000560365_02708;product=HTH tetR-type domain-containing protein;gene=acrR;Parent=GCA000560365_02708_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1309,COG:K,RefSeq:WP_000151112.1,SO:0001217,UniParc:UPI00000DA020,UniRef:UniRef100_Q2FV26,UniRef:UniRef50_Q2FV26,UniRef:UniRef90_Q2FV26
contig_1	Pyrodigal	gene	2736162	2737844	.	+	.	ID=GCA000560365_02709_gene;locus_tag=GCA000560365_02709
contig_1	Pyrodigal	CDS	2736162	2737844	.	+	0	ID=GCA000560365_02709;Name=Xaa-Pro dipeptidyl-peptidase C-terminal domain-containing protein;locus_tag=GCA000560365_02709;product=Xaa-Pro dipeptidyl-peptidase C-terminal domain-containing protein;Parent=GCA000560365_02709_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2936,COG:R,KEGG:K06978,RefSeq:WP_001071591.1,SO:0001217,UniParc:UPI0000696CEC,UniRef:UniRef100_Q2FV24,UniRef:UniRef50_A0A380G5J2,UniRef:UniRef90_Q2FV24
contig_1	Pyrodigal	gene	2737973	2738356	.	-	.	ID=GCA000560365_02710_gene;locus_tag=GCA000560365_02710;gene=panD
contig_1	Pyrodigal	CDS	2737973	2738356	.	-	0	ID=GCA000560365_02710;Name=aspartate 1-decarboxylase;locus_tag=GCA000560365_02710;product=aspartate 1-decarboxylase;Dbxref=GO:0004068,GO:0005829,GO:0006523,GO:0015940;gene=panD;Parent=GCA000560365_02710_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0853,COG:H,KEGG:K01579,RefSeq:WP_000621532.1,SO:0001217,UniParc:UPI00001312C4,UniRef:UniRef100_Q2FV23,UniRef:UniRef50_Q2FV23,UniRef:UniRef90_Q2FV23;ec_number=4.1.1.11
contig_1	Pyrodigal	gene	2738358	2739209	.	-	.	ID=GCA000560365_02711_gene;locus_tag=GCA000560365_02711;gene=panC
contig_1	Pyrodigal	CDS	2738358	2739209	.	-	0	ID=GCA000560365_02711;Name=pantoate--beta-alanine ligase;locus_tag=GCA000560365_02711;product=pantoate--beta-alanine ligase;Dbxref=GO:0004592,GO:0005524,GO:0005829,GO:0015940;gene=panC;Parent=GCA000560365_02711_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0414,COG:H,KEGG:K01918,RefSeq:WP_000163735.1,SO:0001217,UniParc:UPI00004B5D0A,UniRef:UniRef100_Q2FDR1,UniRef:UniRef50_Q2FV22,UniRef:UniRef90_Q2FV22;ec_number=6.3.2.1
contig_1	Pyrodigal	gene	2739202	2740020	.	-	.	ID=GCA000560365_02712_gene;locus_tag=GCA000560365_02712;gene=panB
contig_1	Pyrodigal	CDS	2739202	2740020	.	-	0	ID=GCA000560365_02712;Name=3-methyl-2-oxobutanoate hydroxymethyltransferase;locus_tag=GCA000560365_02712;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;Dbxref=GO:0000287,GO:0003864,GO:0005737,GO:0015940;gene=panB;Parent=GCA000560365_02712_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0413,COG:H,KEGG:K00606,RefSeq:WP_000860047.1,SO:0001217,UniParc:UPI0000131282,UniRef:UniRef100_Q2FV21,UniRef:UniRef50_Q2FV21,UniRef:UniRef90_Q2FV21;ec_number=2.1.2.11
contig_1	Pyrodigal	gene	2740093	2740953	.	+	.	ID=GCA000560365_02713_gene;locus_tag=GCA000560365_02713;gene=panE
contig_1	Pyrodigal	CDS	2740093	2740953	.	+	0	ID=GCA000560365_02713;Name=oxidoreductase;locus_tag=GCA000560365_02713;product=oxidoreductase;gene=panE;Parent=GCA000560365_02713_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1893,COG:H,RefSeq:WP_000953568.1,SO:0001217,UniParc:UPI00004B5D0C,UniRef:UniRef100_A0A0D6GTP0,UniRef:UniRef50_A0A0J9X283,UniRef:UniRef90_A0A0J9X283
contig_1	Pyrodigal	gene	2741039	2741743	.	-	.	ID=GCA000560365_02714_gene;locus_tag=GCA000560365_02714;gene=budA
contig_1	Pyrodigal	CDS	2741039	2741743	.	-	0	ID=GCA000560365_02714;Name=acetolactate decarboxylase;locus_tag=GCA000560365_02714;product=acetolactate decarboxylase;Dbxref=GO:0045151,GO:0047605;gene=budA;Parent=GCA000560365_02714_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3527,COG:Q,KEGG:K01575,RefSeq:WP_000186117.1,SO:0001217,UniParc:UPI00000548FA,UniRef:UniRef100_Q2FV19,UniRef:UniRef50_A0A641A785,UniRef:UniRef90_A0A0U1MVR1;ec_number=4.1.1.5
contig_1	Pyrodigal	gene	2742021	2742980	.	-	.	ID=GCA000560365_02715_gene;locus_tag=GCA000560365_02715;gene=ldh2
contig_1	Pyrodigal	CDS	2742021	2742980	.	-	0	ID=GCA000560365_02715;Name=L-lactate dehydrogenase;locus_tag=GCA000560365_02715;product=L-lactate dehydrogenase;Dbxref=GO:0004459,GO:0005737,GO:0006089,GO:0006096;gene=ldh2;Parent=GCA000560365_02715_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0039,KEGG:K00016,RefSeq:WP_000846637.1,SO:0001217,UniParc:UPI00000548FB,UniRef:UniRef100_Q2G1Y5,UniRef:UniRef50_P00344,UniRef:UniRef90_Q2G1Y5;ec_number=1.1.1.27
contig_1	Pyrodigal	gene	2743667	2745115	.	+	.	ID=GCA000560365_02716_gene;locus_tag=GCA000560365_02716;gene=potE
contig_1	Pyrodigal	CDS	2743667	2745115	.	+	0	ID=GCA000560365_02716;Name=Amino acid permease;locus_tag=GCA000560365_02716;product=Amino acid permease;gene=potE;Parent=GCA000560365_02716_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0531,COG:E,RefSeq:WP_000534425.1,SO:0001217,UniParc:UPI00000522E2,UniRef:UniRef100_A0A0D6WF60,UniRef:UniRef50_A2RHI9,UniRef:UniRef90_Q2G1Y2
contig_1	Pyrodigal	gene	2745196	2746533	.	-	.	ID=GCA000560365_02717_gene;locus_tag=GCA000560365_02717;gene=argD
contig_1	Pyrodigal	CDS	2745196	2746533	.	-	0	ID=GCA000560365_02717;Name=aspartate aminotransferase family protein;locus_tag=GCA000560365_02717;product=aspartate aminotransferase family protein;Dbxref=GO:0008483;gene=argD;Parent=GCA000560365_02717_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0160,COG:E,RefSeq:WP_031808159.1,SO:0001217,UniParc:UPI0004454E77,UniRef:UniRef100_UPI0004454E77,UniRef:UniRef50_Q2G1Y4,UniRef:UniRef90_Q2G1Y4
contig_1	Pyrodigal	gene	2746791	2747207	.	+	.	ID=GCA000560365_02718_gene;locus_tag=GCA000560365_02718
contig_1	Pyrodigal	CDS	2746791	2747207	.	+	0	ID=GCA000560365_02718;Name=hypothetical protein;locus_tag=GCA000560365_02718;product=hypothetical protein;Parent=GCA000560365_02718_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001237629.1,SO:0001217,UniParc:UPI00000CAB0D,UniRef:UniRef100_Q2FV18,UniRef:UniRef50_Q2FV18,UniRef:UniRef90_Q2FV18
contig_1	Pyrodigal	gene	2747330	2748220	.	+	.	ID=GCA000560365_02719_gene;locus_tag=GCA000560365_02719;gene=fda
contig_1	Pyrodigal	CDS	2747330	2748220	.	+	0	ID=GCA000560365_02719;Name=fructose bisphosphate aldolase;locus_tag=GCA000560365_02719;product=fructose bisphosphate aldolase;Dbxref=GO:0004332,GO:0006096;gene=fda;Parent=GCA000560365_02719_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01623,RefSeq:WP_001031413.1,SO:0001217,UniParc:UPI00004B5D0F,UniRef:UniRef100_Q2FV17,UniRef:UniRef50_Q8CMY5,UniRef:UniRef90_Q6GDJ7;ec_number=4.1.2.13
contig_1	Pyrodigal	gene	2748413	2749909	.	-	.	ID=GCA000560365_02720_gene;locus_tag=GCA000560365_02720;gene=lqo
contig_1	Pyrodigal	CDS	2748413	2749909	.	-	0	ID=GCA000560365_02720;Name=L-lactate dehydrogenase (quinone);locus_tag=GCA000560365_02720;product=L-lactate dehydrogenase (quinone);Dbxref=GO:0006099,GO:0008924,GO:0047545;gene=lqo;Parent=GCA000560365_02720_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0579,COG:G,KEGG:K00116,RefSeq:WP_001130051.1,SO:0001217,UniParc:UPI000012F4C1,UniRef:UniRef100_Q5HCU5,UniRef:UniRef50_O69282,UniRef:UniRef90_Q5HCU5;ec_number=1.1.5.4
contig_1	Pyrodigal	gene	2750594	2752213	.	-	.	ID=GCA000560365_02721_gene;locus_tag=GCA000560365_02721;gene=mbcS
contig_1	Pyrodigal	CDS	2750594	2752213	.	-	0	ID=GCA000560365_02721;Name=acyl-CoA synthetase MbcS;locus_tag=GCA000560365_02721;product=acyl-CoA synthetase MbcS;gene=mbcS;Parent=GCA000560365_02721_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0365,COG:I,SO:0001217,UniParc:UPI0000054904,UniRef:UniRef100_A0A380EMG2,UniRef:UniRef50_C0SPB0,UniRef:UniRef90_A0A2K4AH92
contig_1	Pyrodigal	gene	2752386	2752829	.	-	.	ID=GCA000560365_02722_gene;locus_tag=GCA000560365_02722
contig_1	Pyrodigal	CDS	2752386	2752829	.	-	0	ID=GCA000560365_02722;Name=Signal transduction protein TRAP;locus_tag=GCA000560365_02722;product=Signal transduction protein TRAP;Parent=GCA000560365_02722_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000708242.1,SO:0001217,UniParc:UPI00004B5D11,UniRef:UniRef100_Q2FV13,UniRef:UniRef50_A0A2T4SS92,UniRef:UniRef90_A0A0U1MTU5
contig_1	Pyrodigal	gene	2753110	2753322	.	-	.	ID=GCA000560365_02723_gene;locus_tag=GCA000560365_02723;gene=yozE
contig_1	Pyrodigal	CDS	2753110	2753322	.	-	0	ID=GCA000560365_02723;Name=YozE SAM-like domain-containing protein;locus_tag=GCA000560365_02723;product=YozE SAM-like domain-containing protein;gene=yozE;Parent=GCA000560365_02723_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000011688.1,SO:0001217,UniParc:UPI0000054906,UniRef:UniRef100_Q2FV12,UniRef:UniRef50_Q2FV12,UniRef:UniRef90_Q2FV12
contig_1	Pyrodigal	gene	2753600	2755309	.	-	.	ID=GCA000560365_02724_gene;locus_tag=GCA000560365_02724;gene=betA
contig_1	Pyrodigal	CDS	2753600	2755309	.	-	0	ID=GCA000560365_02724;Name=choline dehydrogenase;locus_tag=GCA000560365_02724;product=choline dehydrogenase;Dbxref=GO:0008802,GO:0008812,GO:0016020,GO:0019285,GO:0050660;gene=betA;Parent=GCA000560365_02724_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2303,COG:IR,KEGG:K00108,RefSeq:WP_000066521.1,SO:0001217,UniParc:UPI00000CAC6B,UniRef:UniRef100_Q2FV11,UniRef:UniRef50_Q9X2M2,UniRef:UniRef90_Q8NUM0;ec_number=1.1.99.1
contig_1	Pyrodigal	gene	2755570	2757060	.	-	.	ID=GCA000560365_02725_gene;locus_tag=GCA000560365_02725;gene=betB
contig_1	Pyrodigal	CDS	2755570	2757060	.	-	0	ID=GCA000560365_02725;Name=betaine-aldehyde dehydrogenase;locus_tag=GCA000560365_02725;product=betaine-aldehyde dehydrogenase;Dbxref=GO:0008802,GO:0019285,GO:0046872;gene=betB;Parent=GCA000560365_02725_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1012,COG:I,RefSeq:WP_000421701.1,SO:0001217,UniParc:UPI0000054908,UniRef:UniRef100_Q2FV10,UniRef:UniRef50_P71016,UniRef:UniRef90_A0A114JEL6;ec_number=1.2.1.8
contig_1	Pyrodigal	gene	2757313	2757876	.	+	.	ID=GCA000560365_02726_gene;locus_tag=GCA000560365_02726;gene=cudC
contig_1	Pyrodigal	CDS	2757313	2757876	.	+	0	ID=GCA000560365_02726;Name=choline uptake/conversion transcriptional regulator CudC;locus_tag=GCA000560365_02726;product=choline uptake/conversion transcriptional regulator CudC;gene=cudC;Parent=GCA000560365_02726_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1510,COG:K,RefSeq:WP_000198602.1,SO:0001217,UniParc:UPI0000696CEF,UniRef:UniRef100_A0A5A8VR20,UniRef:UniRef50_A0A653VN80,UniRef:UniRef90_A0A7U7PWT0
contig_1	Pyrodigal	gene	2758064	2758750	.	-	.	ID=GCA000560365_02727_gene;locus_tag=GCA000560365_02727
contig_1	Pyrodigal	CDS	2758064	2758750	.	-	0	ID=GCA000560365_02727;Name=Metallo-beta-lactamase domain-containing protein;locus_tag=GCA000560365_02727;product=Metallo-beta-lactamase domain-containing protein;Parent=GCA000560365_02727_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000184398.1,SO:0001217,UniParc:UPI000005490D,UniRef:UniRef100_Q2FV07,UniRef:UniRef50_Q2FV07,UniRef:UniRef90_Q2FV07
contig_1	Pyrodigal	gene	2759014	2760636	.	-	.	ID=GCA000560365_02728_gene;locus_tag=GCA000560365_02728;gene=betT
contig_1	Pyrodigal	CDS	2759014	2760636	.	-	0	ID=GCA000560365_02728;Name=BCCT family transporter;locus_tag=GCA000560365_02728;product=BCCT family transporter;gene=betT;Parent=GCA000560365_02728_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1292,COG:M,RefSeq:WP_000711870.1,SO:0001217,UniParc:UPI00000D7878,UniRef:UniRef100_Q2FV06,UniRef:UniRef50_B9DJU7,UniRef:UniRef90_A0A2K4AH89
contig_1	Pyrodigal	gene	2761155	2761691	.	-	.	ID=GCA000560365_02729_gene;locus_tag=GCA000560365_02729;gene=nrdG
contig_1	Pyrodigal	CDS	2761155	2761691	.	-	0	ID=GCA000560365_02729;Name=anaerobic ribonucleoside-triphosphate reductase activating protein;locus_tag=GCA000560365_02729;product=anaerobic ribonucleoside-triphosphate reductase activating protein;Dbxref=GO:0043365,GO:0051539;gene=nrdG;Parent=GCA000560365_02729_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0602,COG:H,RefSeq:WP_000601724.1,SO:0001217,UniParc:UPI0000054911,UniRef:UniRef100_Q2FV03,UniRef:UniRef50_Q5HL05,UniRef:UniRef90_W8TQE8
contig_1	Pyrodigal	gene	2761688	2763538	.	-	.	ID=GCA000560365_02730_gene;locus_tag=GCA000560365_02730;gene=nrdD
contig_1	Pyrodigal	CDS	2761688	2763538	.	-	0	ID=GCA000560365_02730;Name=anaerobic ribonucleoside-triphosphate reductase;locus_tag=GCA000560365_02730;product=anaerobic ribonucleoside-triphosphate reductase;Dbxref=GO:0006260,GO:0008998;gene=nrdD;Parent=GCA000560365_02730_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1328,COG:F,KEGG:K21636,RefSeq:WP_001071717.1,SO:0001217,UniParc:UPI0000054912,UniRef:UniRef100_Q2FV02,UniRef:UniRef50_A0A3M8TCM7,UniRef:UniRef90_A0A6B1RSJ5;ec_number=1.17.4.2
contig_1	Pyrodigal	gene	2763785	2765155	.	-	.	ID=GCA000560365_02731_gene;locus_tag=GCA000560365_02731;gene=citM
contig_1	Pyrodigal	CDS	2763785	2765155	.	-	0	ID=GCA000560365_02731;Name=Citrate transporter;locus_tag=GCA000560365_02731;product=Citrate transporter;gene=citM;Parent=GCA000560365_02731_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG2851,RefSeq:WP_001083499.1,SO:0001217,UniParc:UPI00000522E3,UniRef:UniRef100_Q2FV01,UniRef:UniRef50_U7MQB7,UniRef:UniRef90_A0A2K4AHA3
contig_1	Pyrodigal	gene	2765648	2766253	.	-	.	ID=GCA000560365_02732_gene;locus_tag=GCA000560365_02732;gene=cysG2
contig_1	Pyrodigal	CDS	2765648	2766253	.	-	0	ID=GCA000560365_02732;Name=NAD(P)-binding protein;locus_tag=GCA000560365_02732;product=NAD(P)-binding protein;gene=cysG2;Parent=GCA000560365_02732_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1648,COG:H,RefSeq:WP_001057051.1,SO:0001217,UniParc:UPI00004B5D12,UniRef:UniRef100_Q2FUZ9,UniRef:UniRef50_A0A380FX36,UniRef:UniRef90_A0A2S6D249
contig_1	Pyrodigal	gene	2766316	2768196	.	-	.	ID=GCA000560365_02733_gene;locus_tag=GCA000560365_02733;gene=cysJ
contig_1	Pyrodigal	CDS	2766316	2768196	.	-	0	ID=GCA000560365_02733;Name=assimilatory sulfite reductase (NADPH) flavoprotein subunit;locus_tag=GCA000560365_02733;product=assimilatory sulfite reductase (NADPH) flavoprotein subunit;Dbxref=GO:0004783,GO:0006790,GO:0009337,GO:0010181,GO:0019344,GO:0050660;gene=cysJ;Parent=GCA000560365_02733_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0369,COG:FP,RefSeq:WP_031783792.1,SO:0001217,UniParc:UPI0004511DA5,UniRef:UniRef100_UPI0004511DA5,UniRef:UniRef50_A0A380BWQ0,UniRef:UniRef90_Q2FUZ8;ec_number=1.8.1.2
contig_1	Pyrodigal	gene	2768591	2769088	.	-	.	ID=GCA000560365_02734_gene;locus_tag=GCA000560365_02734;gene=btuE
contig_1	Pyrodigal	CDS	2768591	2769088	.	-	0	ID=GCA000560365_02734;Name=Glutathione peroxidase;locus_tag=GCA000560365_02734;product=Glutathione peroxidase;gene=btuE;Parent=GCA000560365_02734_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0386,COG:VI,KEGG:K00432,RefSeq:WP_001065268.1,SO:0001217,UniParc:UPI0000054918,UniRef:UniRef100_Q2FUZ6,UniRef:UniRef50_Q5HKZ3,UniRef:UniRef90_A0A7U7JRL2;ec_number=1.11.1.9
contig_1	Pyrodigal	gene	2770512	2772512	.	-	.	ID=GCA000560365_02735_gene;locus_tag=GCA000560365_02735
contig_1	Pyrodigal	CDS	2770512	2772512	.	-	0	ID=GCA000560365_02735;Name=Similar to ABC transporter (ATP-binding protein);locus_tag=GCA000560365_02735;product=Similar to ABC transporter (ATP-binding protein);Parent=GCA000560365_02735_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K19084,RefSeq:WP_000776751.1,SO:0001217,UniParc:UPI000005491B,UniRef:UniRef100_A0A0D6WF85,UniRef:UniRef50_A0A7U7F0H2,UniRef:UniRef90_A0A7U7F0H2
contig_1	Pyrodigal	gene	2772509	2773264	.	-	.	ID=GCA000560365_02736_gene;locus_tag=GCA000560365_02736;gene=lolD
contig_1	Pyrodigal	CDS	2772509	2773264	.	-	0	ID=GCA000560365_02736;Name=ABC transporter ATP-binding protein;locus_tag=GCA000560365_02736;product=ABC transporter ATP-binding protein;gene=lolD;Parent=GCA000560365_02736_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1136,COG:M,RefSeq:WP_000923760.1,SO:0001217,UniParc:UPI00000D782D,UniRef:UniRef100_Q2FUZ1,UniRef:UniRef50_A0A2S6D259,UniRef:UniRef90_A0A2S6D259
contig_1	Pyrodigal	gene	2773372	2774259	.	-	.	ID=GCA000560365_02737_gene;locus_tag=GCA000560365_02737;gene=nsaS
contig_1	Pyrodigal	CDS	2773372	2774259	.	-	0	ID=GCA000560365_02737;Name=nisin susceptibility-associated two-component system sensor histidine kinase NsaS;locus_tag=GCA000560365_02737;product=nisin susceptibility-associated two-component system sensor histidine kinase NsaS;gene=nsaS;Parent=GCA000560365_02737_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000143419,COG:COG0642,COG:T,KEGG:K19081,RefSeq:WP_000143419.1,SO:0001217,UniParc:UPI00004B5D16,UniRef:UniRef100_Q2FUZ0,UniRef:UniRef50_A0A389PV50,UniRef:UniRef90_A0A389PV50;ec_number=2.7.13.3
contig_1	Pyrodigal	gene	2774270	2774935	.	-	.	ID=GCA000560365_02738_gene;locus_tag=GCA000560365_02738;gene=nsaR
contig_1	Pyrodigal	CDS	2774270	2774935	.	-	0	ID=GCA000560365_02738;Name=nisin susceptibility-associated two-component system response regulator NsaR;locus_tag=GCA000560365_02738;product=nisin susceptibility-associated two-component system response regulator NsaR;gene=nsaR;Parent=GCA000560365_02738_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000697886,COG:COG0745,COG:TK,RefSeq:WP_000697886.1,SO:0001217,UniParc:UPI000005491E,UniRef:UniRef100_Q2FUY9,UniRef:UniRef50_A0A371ILZ4,UniRef:UniRef90_A0A5F0HLH2
contig_1	Pyrodigal	gene	2774961	2775161	.	-	.	ID=GCA000560365_02739_gene;locus_tag=GCA000560365_02739
contig_1	Pyrodigal	CDS	2774961	2775161	.	-	0	ID=GCA000560365_02739;Name=hypothetical protein;locus_tag=GCA000560365_02739;product=hypothetical protein;Parent=GCA000560365_02739_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000604728.1,SO:0001217,UniParc:UPI000005491F,UniRef:UniRef100_Q2FUY8,UniRef:UniRef50_Q2FUY8,UniRef:UniRef90_Q2FUY8
contig_1	Pyrodigal	gene	2775359	2776783	.	+	.	ID=GCA000560365_02740_gene;locus_tag=GCA000560365_02740;gene=phoA
contig_1	Pyrodigal	CDS	2775359	2776783	.	+	0	ID=GCA000560365_02740;Name=Alkaline phosphatase 3;locus_tag=GCA000560365_02740;product=Alkaline phosphatase 3;gene=phoA;Parent=GCA000560365_02740_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1785,COG:PR,KEGG:K01077,RefSeq:WP_000953744.1,SO:0001217,UniParc:UPI0000054920,UniRef:UniRef100_Q2FUY6,UniRef:UniRef50_A0A0U1MVV2,UniRef:UniRef90_A0A0U1MVV2;ec_number=3.1.3.1
contig_1	Infernal	gene	2776142	2776245	.	-	.	ID=GCA000560365_02741_gene;locus_tag=GCA000560365_02741;gene=sau-13
contig_1	Infernal	ncRNA	2776142	2776245	2e-18	-	.	ID=GCA000560365_02741;Name=Staphylococcus sRNA sau-13;locus_tag=GCA000560365_02741;product=Staphylococcus sRNA sau-13;Dbxref=RFAM:RF02385;Parent=GCA000560365_02741_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02385
contig_1	Pyrodigal	gene	2776843	2776947	.	-	.	ID=GCA000560365_02742_gene;locus_tag=GCA000560365_02742
contig_1	Pyrodigal	CDS	2776843	2776947	.	-	0	ID=GCA000560365_02742;Name=SE2200 family small protein;locus_tag=GCA000560365_02742;product=SE2200 family small protein;Parent=GCA000560365_02742_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI0000054923,UniRef:UniRef100_Q8NUL1,UniRef:UniRef50_P60876,UniRef:UniRef90_P60876
contig_1	Pyrodigal	gene	2777066	2777521	.	-	.	ID=GCA000560365_02743_gene;locus_tag=GCA000560365_02743;gene=marR
contig_1	Pyrodigal	CDS	2777066	2777521	.	-	0	ID=GCA000560365_02743;Name=HTH marR-type domain-containing protein;locus_tag=GCA000560365_02743;product=HTH marR-type domain-containing protein;gene=marR;Parent=GCA000560365_02743_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1846,COG:K,RefSeq:WP_000106185.1,SO:0001217,UniParc:UPI0000054925,UniRef:UniRef100_Q2FUY4,UniRef:UniRef50_Q2FUY4,UniRef:UniRef90_Q2FUY4
contig_1	Pyrodigal	gene	2777766	2778527	.	-	.	ID=GCA000560365_02744_gene;locus_tag=GCA000560365_02744;gene=frmB
contig_1	Pyrodigal	CDS	2777766	2778527	.	-	0	ID=GCA000560365_02744;Name=S-formylglutathione hydrolase;locus_tag=GCA000560365_02744;product=S-formylglutathione hydrolase;gene=frmB;Parent=GCA000560365_02744_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0627,COG:V,RefSeq:WP_000323455.1,SO:0001217,UniParc:UPI0000054926,UniRef:UniRef100_Q2FUY3,UniRef:UniRef50_Q2FUY3,UniRef:UniRef90_Q2FUY3
contig_1	Pyrodigal	gene	2778643	2781090	.	-	.	ID=GCA000560365_02745_gene;locus_tag=GCA000560365_02745;gene=clfB
contig_1	Pyrodigal	CDS	2778643	2781090	.	-	0	ID=GCA000560365_02745;Name=MSCRAMM family adhesin clumping factor ClfB;locus_tag=GCA000560365_02745;product=MSCRAMM family adhesin clumping factor ClfB;Dbxref=GO:0007155;gene=clfB;Parent=GCA000560365_02745_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_031808160.1,SO:0001217,UniParc:UPI00044CDD1B,UniRef:UniRef100_UPI00044CDD1B,UniRef:UniRef50_UPI00044CDD1B,UniRef:UniRef90_UPI00044CDD1B
contig_1	Pyrodigal	gene	2781440	2782144	.	-	.	ID=GCA000560365_02746_gene;locus_tag=GCA000560365_02746;gene=arcR
contig_1	Pyrodigal	CDS	2781440	2782144	.	-	0	ID=GCA000560365_02746;Name=HTH-type transcriptional regulator ArcR;locus_tag=GCA000560365_02746;product=HTH-type transcriptional regulator ArcR;Dbxref=GO:0003677,GO:0005737,GO:0030552;gene=arcR;Parent=GCA000560365_02746_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0664,COG:T,KEGG:K21828,RefSeq:WP_000138214.1,SO:0001217,UniParc:UPI0000054928,UniRef:UniRef100_Q2FUY1,UniRef:UniRef50_Q2FUY1,UniRef:UniRef90_Q2FUY1
contig_1	Pyrodigal	gene	2782243	2783184	.	-	.	ID=GCA000560365_02747_gene;locus_tag=GCA000560365_02747;gene=arcC
contig_1	Pyrodigal	CDS	2782243	2783184	.	-	0	ID=GCA000560365_02747;Name=carbamate kinase;locus_tag=GCA000560365_02747;product=carbamate kinase;Dbxref=GO:0005524,GO:0005829,GO:0006520,GO:0008804,GO:0019546;gene=arcC;Parent=GCA000560365_02747_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0549,COG:E,RefSeq:WP_000660034.1,SO:0001217,UniParc:UPI00001A9C89,UniRef:UniRef100_Q7X2S2,UniRef:UniRef50_P0A2X7,UniRef:UniRef90_P63555;ec_number=2.7.2.2
contig_1	Pyrodigal	gene	2783201	2784631	.	-	.	ID=GCA000560365_02748_gene;locus_tag=GCA000560365_02748;gene=arcD
contig_1	Pyrodigal	CDS	2783201	2784631	.	-	0	ID=GCA000560365_02748;Name=arginine-ornithine antiporter;locus_tag=GCA000560365_02748;product=arginine-ornithine antiporter;Dbxref=GO:0005886,GO:0006527,GO:0043858,GO:1903826;gene=arcD;Parent=GCA000560365_02748_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0531,COG:E,KEGG:K03758,RefSeq:WP_001005842.1,SO:0001217,UniParc:UPI00001A9C88,UniRef:UniRef100_Q2FUX9,UniRef:UniRef50_A0A0Y9RFY3,UniRef:UniRef90_A0A0Y9RFY3
contig_1	Pyrodigal	gene	2784722	2785732	.	-	.	ID=GCA000560365_02749_gene;locus_tag=GCA000560365_02749;gene=argF
contig_1	Pyrodigal	CDS	2784722	2785732	.	-	0	ID=GCA000560365_02749;Name=ornithine carbamoyltransferase;locus_tag=GCA000560365_02749;product=ornithine carbamoyltransferase;Dbxref=GO:0004585,GO:0005737,GO:0006526,GO:0016597,GO:0019240,GO:0019547,GO:0042450;gene=argF;Parent=GCA000560365_02749_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0078,COG:E,KEGG:K00611,RefSeq:WP_000136166.1,SO:0001217,UniParc:UPI00000DA038,UniRef:UniRef100_Q5HCR3,UniRef:UniRef50_P08308,UniRef:UniRef90_P65601;ec_number=2.1.3.3
contig_1	Pyrodigal	gene	2785765	2787000	.	-	.	ID=GCA000560365_02750_gene;locus_tag=GCA000560365_02750;gene=arcA
contig_1	Pyrodigal	CDS	2785765	2787000	.	-	0	ID=GCA000560365_02750;Name=arginine deiminase;locus_tag=GCA000560365_02750;product=arginine deiminase;Dbxref=GO:0005737,GO:0016990,GO:0019546,GO:0019547;gene=arcA;Parent=GCA000560365_02750_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2235,COG:E,RefSeq:WP_000129411.1,SO:0001217,UniParc:UPI000005492C,UniRef:UniRef100_Q2FUX7,UniRef:UniRef50_O86131,UniRef:UniRef90_Q2FUX7;ec_number=3.5.3.6
contig_1	Pyrodigal	gene	2787347	2787796	.	-	.	ID=GCA000560365_02751_gene;locus_tag=GCA000560365_02751;gene=argR
contig_1	Pyrodigal	CDS	2787347	2787796	.	-	0	ID=GCA000560365_02751;Name=Arginine repressor;locus_tag=GCA000560365_02751;product=Arginine repressor;gene=argR;Parent=GCA000560365_02751_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1438,COG:K,RefSeq:WP_000748760.1,SO:0001217,UniParc:UPI00000D7654,UniRef:UniRef100_Q2FUX5,UniRef:UniRef50_A0A2K4AHB6,UniRef:UniRef90_A0A2K4AHB6
contig_1	Pyrodigal	gene	2788163	2789692	.	-	.	ID=GCA000560365_02752_gene;locus_tag=GCA000560365_02752;gene=aur
contig_1	Pyrodigal	CDS	2788163	2789692	.	-	0	ID=GCA000560365_02752;Name=zinc metalloproteinase aureolysin;locus_tag=GCA000560365_02752;product=zinc metalloproteinase aureolysin;Dbxref=GO:0004222,GO:0006508,GO:0046872;gene=aur;Parent=GCA000560365_02752_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3227,COG:O,KEGG:K01401,NCBIProtein:EHO93748.1,RefSeq:WP_001225019.1,SO:0001217,UniParc:UPI0000052250,UniRef:UniRef100_Q2FUX4,UniRef:UniRef50_P81177,UniRef:UniRef90_P81177,VFDB:VFC0251,VFDB:VFG001314;ec_number=3.4.24.29
contig_1	Pyrodigal	gene	2790116	2790643	.	-	.	ID=GCA000560365_02753_gene;locus_tag=GCA000560365_02753;gene=isaB
contig_1	Pyrodigal	CDS	2790116	2790643	.	-	0	ID=GCA000560365_02753;Name=immunodominant staphylococcal antigen IsaB;locus_tag=GCA000560365_02753;product=immunodominant staphylococcal antigen IsaB;Dbxref=GO:0005576;gene=isaB;Parent=GCA000560365_02753_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001044560,BlastRules:WP_001077096,RefSeq:WP_001044560.1,SO:0001217,UniParc:UPI000005492F,UniRef:UniRef100_Q2FUX3,UniRef:UniRef50_Q2FUX3,UniRef:UniRef90_Q2FUX3
contig_1	Pyrodigal	gene	2790901	2791359	.	+	.	ID=GCA000560365_02754_gene;locus_tag=GCA000560365_02754
contig_1	Pyrodigal	CDS	2790901	2791359	.	+	0	ID=GCA000560365_02754;Name=Low-complexity protein;locus_tag=GCA000560365_02754;product=Low-complexity protein;Parent=GCA000560365_02754_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000734803.1,SO:0001217,UniParc:UPI00004B5D18,UniRef:UniRef100_Q2FUX2,UniRef:UniRef50_Q2FUX2,UniRef:UniRef90_Q2FUX2
contig_1	Pyrodigal	gene	2791599	2793473	.	+	.	ID=GCA000560365_02755_gene;locus_tag=GCA000560365_02755;gene=bglG
contig_1	Pyrodigal	CDS	2791599	2793473	.	+	0	ID=GCA000560365_02755;Name=Activator of the mannose operon (Transcriptional antiterminator)%2C BglG family;locus_tag=GCA000560365_02755;product=Activator of the mannose operon (Transcriptional antiterminator)%2C BglG family;gene=bglG;Parent=GCA000560365_02755_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3711,COG:K,KEGG:K02538,RefSeq:WP_000887026.1,SO:0001217,UniParc:UPI0000054931,UniRef:UniRef100_Q2FUX1,UniRef:UniRef50_A0A2I7YB65,UniRef:UniRef90_A0A2I7YB65
contig_1	Pyrodigal	gene	2793550	2795502	.	+	.	ID=GCA000560365_02756_gene;locus_tag=GCA000560365_02756;gene=ptsN
contig_1	Pyrodigal	CDS	2793550	2795502	.	+	0	ID=GCA000560365_02756;Name=Phosphotransferase system (PTS) mannose-specific enzyme IIBCA component;locus_tag=GCA000560365_02756;product=Phosphotransferase system (PTS) mannose-specific enzyme IIBCA component;gene=ptsN;Parent=GCA000560365_02756_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1762,COG:GT,RefSeq:WP_031808161.1,SO:0001217,UniParc:UPI0004468EF0,UniRef:UniRef100_UPI0004468EF0,UniRef:UniRef50_O31645,UniRef:UniRef90_A0A0U1MW07
contig_1	Pyrodigal	gene	2795516	2796454	.	+	.	ID=GCA000560365_02757_gene;locus_tag=GCA000560365_02757;gene=manA
contig_1	Pyrodigal	CDS	2795516	2796454	.	+	0	ID=GCA000560365_02757;Name=mannose-6-phosphate isomerase%2C class I;locus_tag=GCA000560365_02757;product=mannose-6-phosphate isomerase%2C class I;Dbxref=GO:0004476,GO:0005975,GO:0008270;gene=manA;Parent=GCA000560365_02757_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1482,COG:G,RefSeq:WP_001173201.1,SO:0001217,UniParc:UPI0000054933,UniRef:UniRef100_Q2G223,UniRef:UniRef50_Q59935,UniRef:UniRef90_A0A0D1I542;ec_number=5.3.1.8
contig_1	Pyrodigal	gene	2796566	2799547	.	-	.	ID=GCA000560365_02758_gene;locus_tag=GCA000560365_02758;gene=yhgE
contig_1	Pyrodigal	CDS	2796566	2799547	.	-	0	ID=GCA000560365_02758;Name=Phage infection protein%2C putative;locus_tag=GCA000560365_02758;product=Phage infection protein%2C putative;gene=yhgE;Parent=GCA000560365_02758_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1511,COG:S,KEGG:K01421,RefSeq:WP_000785110.1,SO:0001217,UniParc:UPI00004B5D1A,UniRef:UniRef100_Q2G221,UniRef:UniRef50_Q49UI0,UniRef:UniRef90_Q2G221
contig_1	Pyrodigal	gene	2799758	2801617	.	+	.	ID=GCA000560365_02759_gene;locus_tag=GCA000560365_02759
contig_1	Pyrodigal	CDS	2799758	2801617	.	+	0	ID=GCA000560365_02759;Name=amidase domain-containing protein;locus_tag=GCA000560365_02759;product=amidase domain-containing protein;Dbxref=GO:0004040,GO:0005576;Parent=GCA000560365_02759_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3942,COG:M,RefSeq:WP_001125610.1,SO:0001217,UniParc:UPI0000696CF2,UniRef:UniRef100_A0A0E8I376,UniRef:UniRef50_Q2G222,UniRef:UniRef90_Q2G222
contig_1	Pyrodigal	gene	2801884	2802444	.	-	.	ID=GCA000560365_02760_gene;locus_tag=GCA000560365_02760;gene=pncA
contig_1	Pyrodigal	CDS	2801884	2802444	.	-	0	ID=GCA000560365_02760;Name=Isochorismatase-like domain-containing protein;locus_tag=GCA000560365_02760;product=Isochorismatase-like domain-containing protein;gene=pncA;Parent=GCA000560365_02760_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1335,COG:HR,RefSeq:WP_000088195.1,SO:0001217,UniParc:UPI00000D7800,UniRef:UniRef100_Q2G220,UniRef:UniRef50_Q2G220,UniRef:UniRef90_Q2G220
contig_1	Pyrodigal	gene	2802612	2804519	.	-	.	ID=GCA000560365_02761_gene;locus_tag=GCA000560365_02761;gene=sasF
contig_1	Pyrodigal	CDS	2802612	2804519	.	-	0	ID=GCA000560365_02761;Name=cell-wall-anchored protein SasF;locus_tag=GCA000560365_02761;product=cell-wall-anchored protein SasF;Dbxref=GO:0005576;gene=sasF;Parent=GCA000560365_02761_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_001151900,RefSeq:WP_001151900.1,SO:0001217,UniParc:UPI00004B5D1B,UniRef:UniRef100_Q2FUW9,UniRef:UniRef50_Q2FUW9,UniRef:UniRef90_Q2FUW9
contig_1	Pyrodigal	gene	2804761	2806119	.	-	.	ID=GCA000560365_02762_gene;locus_tag=GCA000560365_02762;gene=gtfB
contig_1	Pyrodigal	CDS	2804761	2806119	.	-	0	ID=GCA000560365_02762;Name=accessory Sec system glycosylation chaperone GtfB;locus_tag=GCA000560365_02762;product=accessory Sec system glycosylation chaperone GtfB;Dbxref=GO:0031647;gene=gtfB;Parent=GCA000560365_02762_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000593153.1,SO:0001217,UniParc:UPI0000054938,UniRef:UniRef100_Q2FUW8,UniRef:UniRef50_A0A7U7PX78,UniRef:UniRef90_A0A5S9I5Q0
contig_1	Pyrodigal	gene	2806112	2807620	.	-	.	ID=GCA000560365_02763_gene;locus_tag=GCA000560365_02763;gene=gtfA
contig_1	Pyrodigal	CDS	2806112	2807620	.	-	0	ID=GCA000560365_02763;Name=accessory Sec system glycosyltransferase GtfA;locus_tag=GCA000560365_02763;product=accessory Sec system glycosyltransferase GtfA;Dbxref=GO:0016757;gene=gtfA;Parent=GCA000560365_02763_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0438,COG:M,RefSeq:WP_000158433.1,SO:0001217,UniParc:UPI0000054939,UniRef:UniRef100_Q2FUW7,UniRef:UniRef50_A0A077UJB5,UniRef:UniRef90_A0A390ZTZ9
contig_1	Pyrodigal	gene	2807638	2810028	.	-	.	ID=GCA000560365_02764_gene;locus_tag=GCA000560365_02764;gene=secA2
contig_1	Pyrodigal	CDS	2807638	2810028	.	-	0	ID=GCA000560365_02764;Name=accessory Sec system translocase SecA2;locus_tag=GCA000560365_02764;product=accessory Sec system translocase SecA2;Dbxref=GO:0005524,GO:0005829,GO:0005886,GO:0006605,GO:0008564,GO:0015031,GO:0015450,GO:0017038,GO:0031522,GO:0043952,GO:0065002;gene=secA2;Parent=GCA000560365_02764_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0653,COG:U,RefSeq:WP_000680947.1,SO:0001217,UniParc:UPI000005493A,UniRef:UniRef100_Q2FUW6,UniRef:UniRef50_Q2FUW6,UniRef:UniRef90_Q2FUW6;ec_number=7.4.2.8
contig_1	Pyrodigal	gene	2810018	2810977	.	-	.	ID=GCA000560365_02765_gene;locus_tag=GCA000560365_02765;gene=asp3
contig_1	Pyrodigal	CDS	2810018	2810977	.	-	0	ID=GCA000560365_02765;Name=accessory Sec system protein Asp3;locus_tag=GCA000560365_02765;product=accessory Sec system protein Asp3;Dbxref=GO:0006886,GO:0015031;gene=asp3;Parent=GCA000560365_02765_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K12270,RefSeq:WP_000916742.1,SO:0001217,UniParc:UPI00004B5D1C,UniRef:UniRef100_Q2FUW5,UniRef:UniRef50_Q2FUW5,UniRef:UniRef90_Q2FUW5
contig_1	Pyrodigal	gene	2810955	2812526	.	-	.	ID=GCA000560365_02766_gene;locus_tag=GCA000560365_02766;gene=asp2
contig_1	Pyrodigal	CDS	2810955	2812526	.	-	0	ID=GCA000560365_02766;Name=accessory Sec system protein Asp2;locus_tag=GCA000560365_02766;product=accessory Sec system protein Asp2;Dbxref=GO:0006886,GO:0015031;gene=asp2;Parent=GCA000560365_02766_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K12269,SO:0001217,UniRef:UniRef50_Q2FUW4,UniRef:UniRef90_Q2FUW4
contig_1	Pyrodigal	gene	2812513	2814066	.	-	.	ID=GCA000560365_02767_gene;locus_tag=GCA000560365_02767;gene=asp1
contig_1	Pyrodigal	CDS	2812513	2814066	.	-	0	ID=GCA000560365_02767;Name=accessory Sec system protein Asp1;locus_tag=GCA000560365_02767;product=accessory Sec system protein Asp1;Dbxref=GO:0006886,GO:0015031;gene=asp1;Parent=GCA000560365_02767_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000873197.1,SO:0001217,UniParc:UPI000005493D,UniRef:UniRef100_Q2FUW3,UniRef:UniRef50_Q2FUW3,UniRef:UniRef90_Q2FUW3
contig_1	Pyrodigal	gene	2814077	2815288	.	-	.	ID=GCA000560365_02768_gene;locus_tag=GCA000560365_02768;gene=secY2
contig_1	Pyrodigal	CDS	2814077	2815288	.	-	0	ID=GCA000560365_02768;Name=accessory Sec system protein translocase subunit SecY2;locus_tag=GCA000560365_02768;product=accessory Sec system protein translocase subunit SecY2;Dbxref=GO:0005886,GO:0006605,GO:0065002;gene=secY2;Parent=GCA000560365_02768_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0201,COG:U,RefSeq:WP_000916119.1,SO:0001217,UniParc:UPI000005493F,UniRef:UniRef100_Q2FUW2,UniRef:UniRef50_Q2FUW2,UniRef:UniRef90_Q2FUW2
contig_1	Pyrodigal	gene	2815418	2822233	.	-	.	ID=GCA000560365_02769_gene;locus_tag=GCA000560365_02769;gene=sraP
contig_1	Pyrodigal	CDS	2815418	2822233	.	-	0	ID=GCA000560365_02769;Name=Serine-rich adhesin for platelets;locus_tag=GCA000560365_02769;product=Serine-rich adhesin for platelets;Dbxref=GO:0005509,GO:0005576,GO:0007155,GO:0016020;gene=sraP;Parent=GCA000560365_02769_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000044529.1,SO:0001217,UniParc:UPI0000696CF4,UniRef:UniRef100_Q2FDK5,UniRef:UniRef50_Q2FUW1,UniRef:UniRef90_Q2FUW1
contig_1	Pyrodigal	gene	2822778	2823470	.	-	.	ID=GCA000560365_02770_gene;locus_tag=GCA000560365_02770;gene=rutF
contig_1	Pyrodigal	CDS	2822778	2823470	.	-	0	ID=GCA000560365_02770;Name=Flavin reductase like domain-containing protein;locus_tag=GCA000560365_02770;product=Flavin reductase like domain-containing protein;gene=rutF;Parent=GCA000560365_02770_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1853,RefSeq:WP_001109877.1,SO:0001217,UniParc:UPI0000696CF5,UniRef:UniRef100_A0A5A8VQ05,UniRef:UniRef50_K8DVZ2,UniRef:UniRef90_K8DWD5
contig_1	Pyrodigal	gene	2823736	2824164	.	+	.	ID=GCA000560365_02771_gene;locus_tag=GCA000560365_02771
contig_1	Pyrodigal	CDS	2823736	2824164	.	+	0	ID=GCA000560365_02771;Name=Lipoprotein;locus_tag=GCA000560365_02771;product=Lipoprotein;Parent=GCA000560365_02771_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001549854.1,SO:0001217,UniParc:UPI0000054948,UniRef:UniRef100_Q2FUV9,UniRef:UniRef50_A0A853UZX6,UniRef:UniRef90_Q2FUV9
contig_1	Pyrodigal	gene	2824151	2824453	.	+	.	ID=GCA000560365_02772_gene;locus_tag=GCA000560365_02772
contig_1	Pyrodigal	CDS	2824151	2824453	.	+	0	ID=GCA000560365_02772;Name=Phage protein;locus_tag=GCA000560365_02772;product=Phage protein;Parent=GCA000560365_02772_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001260013.1,SO:0001217,UniParc:UPI00004B5D1F,UniRef:UniRef100_Q2FUV8,UniRef:UniRef50_A0A7U7PXN0,UniRef:UniRef90_Q2FUV8
contig_1	Pyrodigal	gene	2824607	2824966	.	+	.	ID=GCA000560365_02773_gene;locus_tag=GCA000560365_02773;gene=doxX
contig_1	Pyrodigal	CDS	2824607	2824966	.	+	0	ID=GCA000560365_02773;Name=DoxX family protein;locus_tag=GCA000560365_02773;product=DoxX family protein;gene=doxX;Parent=GCA000560365_02773_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000603480.1,SO:0001217,UniParc:UPI000005494B,UniRef:UniRef100_Q2FUV7,UniRef:UniRef50_A0A1E9AB62,UniRef:UniRef90_Q2FUV7
contig_1	Pyrodigal	gene	2825051	2825662	.	-	.	ID=GCA000560365_02774_gene;locus_tag=GCA000560365_02774;gene=rutF
contig_1	Pyrodigal	CDS	2825051	2825662	.	-	0	ID=GCA000560365_02774;Name=Flavin reductase like domain-containing protein;locus_tag=GCA000560365_02774;product=Flavin reductase like domain-containing protein;gene=rutF;Parent=GCA000560365_02774_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1853,RefSeq:WP_000287917.1,SO:0001217,UniParc:UPI000005494C,UniRef:UniRef100_Q2FUV6,UniRef:UniRef50_F4BMC7,UniRef:UniRef90_A0A7U7JRS4
contig_1	Pyrodigal	gene	2825741	2826217	.	-	.	ID=GCA000560365_02775_gene;locus_tag=GCA000560365_02775;gene=msrA
contig_1	Pyrodigal	CDS	2825741	2826217	.	-	0	ID=GCA000560365_02775;Name=peptide-methionine (S)-S-oxide reductase;locus_tag=GCA000560365_02775;product=peptide-methionine (S)-S-oxide reductase;Dbxref=GO:0008113;gene=msrA;Parent=GCA000560365_02775_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0225,COG:O,RefSeq:WP_000301926.1,SO:0001217,UniParc:UPI000005494D,UniRef:UniRef100_Q2FUV5,UniRef:UniRef50_M7NDY9,UniRef:UniRef90_A0A131HWZ4;ec_number=1.8.4.11
contig_1	Pyrodigal	gene	2826220	2826720	.	-	.	ID=GCA000560365_02776_gene;locus_tag=GCA000560365_02776;gene=yhbS
contig_1	Pyrodigal	CDS	2826220	2826720	.	-	0	ID=GCA000560365_02776;Name=N-acetyltransferase domain-containing protein;locus_tag=GCA000560365_02776;product=N-acetyltransferase domain-containing protein;gene=yhbS;Parent=GCA000560365_02776_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3153,COG:R,RefSeq:WP_000244278.1,SO:0001217,UniParc:UPI000005494E,UniRef:UniRef100_Q2FUV4,UniRef:UniRef50_Q2FUV4,UniRef:UniRef90_Q2FUV4
contig_1	Pyrodigal	gene	2826955	2827722	.	-	.	ID=GCA000560365_02777_gene;locus_tag=GCA000560365_02777;gene=ywqE
contig_1	Pyrodigal	CDS	2826955	2827722	.	-	0	ID=GCA000560365_02777;Name=Tyrosine-protein phosphatase;locus_tag=GCA000560365_02777;product=Tyrosine-protein phosphatase;gene=ywqE;Parent=GCA000560365_02777_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4464,COG:T,RefSeq:WP_000565310.1,SO:0001217,UniParc:UPI000005494F,UniRef:UniRef100_Q2FUV3,UniRef:UniRef50_P39852,UniRef:UniRef90_A0A0U1MU51
contig_1	Pyrodigal	gene	2827719	2828411	.	-	.	ID=GCA000560365_02778_gene;locus_tag=GCA000560365_02778;gene=mrp
contig_1	Pyrodigal	CDS	2827719	2828411	.	-	0	ID=GCA000560365_02778;Name=non-specific protein-tyrosine kinase;locus_tag=GCA000560365_02778;product=non-specific protein-tyrosine kinase;gene=mrp;Parent=GCA000560365_02778_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0489,COG:D,RefSeq:WP_000185864.1,SO:0001217,UniParc:UPI0000054950,UniRef:UniRef100_Q2FUV2,UniRef:UniRef50_P39851,UniRef:UniRef90_A8YPQ5
contig_1	Pyrodigal	gene	2828428	2829090	.	-	.	ID=GCA000560365_02779_gene;locus_tag=GCA000560365_02779;gene=capA
contig_1	Pyrodigal	CDS	2828428	2829090	.	-	0	ID=GCA000560365_02779;Name=Capsular polysaccharide biosynthesis protein CapA;locus_tag=GCA000560365_02779;product=Capsular polysaccharide biosynthesis protein CapA;Dbxref=GO:0004713,GO:0005886,GO:0045227;gene=capA;Parent=GCA000560365_02779_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3944,COG:M,RefSeq:WP_000659675.1,SO:0001217,UniParc:UPI00000D7682,UniRef:UniRef100_Q5HCN3,UniRef:UniRef50_Q5HCN3,UniRef:UniRef90_Q5HCN3
contig_1	Infernal	regulatory_region	2829548	2829937	1.1e-45	-	.	ID=KMHODOBJJH_166;Name=icaR 3'UTR;product=icaR 3'UTR;Dbxref=RFAM:RF02660;inference=profile:Rfam:RF02660;Note=SO:0005836;regulatory_class=other
contig_1	Pyrodigal	gene	2829938	2830498	.	-	.	ID=GCA000560365_02780_gene;locus_tag=GCA000560365_02780;gene=icaR
contig_1	Pyrodigal	CDS	2829938	2830498	.	-	0	ID=GCA000560365_02780;Name=ica operon transcriptional regulator IcaR;locus_tag=GCA000560365_02780;product=ica operon transcriptional regulator IcaR;Dbxref=GO:0003677;gene=icaR;Parent=GCA000560365_02780_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000653261,COG:COG1309,COG:K,RefSeq:WP_000653261.1,SO:0001217,UniParc:UPI00000D7897,UniRef:UniRef100_Q9RQQ0,UniRef:UniRef50_Q5HKQ1,UniRef:UniRef90_Q9RQQ0
contig_1	Infernal	regulatory_region	2830496	2830570	2e-17	-	.	ID=KMHODOBJJH_171;Name=icaR 5' UTR;product=icaR 5' UTR;Dbxref=RFAM:RF02661;inference=profile:Rfam:RF02661;Note=SO:0005836;regulatory_class=other
contig_1	Pyrodigal	gene	2830662	2831900	.	+	.	ID=GCA000560365_02781_gene;locus_tag=GCA000560365_02781;gene=icaA
contig_1	Pyrodigal	CDS	2830662	2831900	.	+	0	ID=GCA000560365_02781;Name=N-acetylglucosaminyltransferase%2C involved in polysaccharide intercellular adhesin(PIA) synthesis;locus_tag=GCA000560365_02781;product=N-acetylglucosaminyltransferase%2C involved in polysaccharide intercellular adhesin(PIA) synthesis;Dbxref=GO:0005886,GO:0008375,GO:0042710,GO:0043708;gene=icaA;Parent=GCA000560365_02781_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1215,COG:N,RefSeq:WP_001159430.1,SO:0001217,UniParc:UPI00000CAC33,UniRef:UniRef100_Q9RQP9,UniRef:UniRef50_Q5HKQ0,UniRef:UniRef90_Q9RQP9,VFDB:VFC0271,VFDB:VFG001285;ec_number=2.4.1.-
contig_1	Pyrodigal	gene	2831864	2832169	.	+	.	ID=GCA000560365_02782_gene;locus_tag=GCA000560365_02782;gene=icaD
contig_1	Pyrodigal	CDS	2831864	2832169	.	+	0	ID=GCA000560365_02782;Name=intercellular adhesion protein D%2C involved in polysaccharide intercellular adhesin(PIA) synthesis;locus_tag=GCA000560365_02782;product=intercellular adhesion protein D%2C involved in polysaccharide intercellular adhesin(PIA) synthesis;Dbxref=GO:0000271,GO:0005886,GO:0008375;gene=icaD;Parent=GCA000560365_02782_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K21461,RefSeq:WP_000240580.1,SO:0001217,UniParc:UPI0000054955,UniRef:UniRef100_Q9RQP8,UniRef:UniRef50_Q5HKP9,UniRef:UniRef90_Q9RQP8,VFDB:VFC0271,VFDB:VFG001286
contig_1	Pyrodigal	gene	2832166	2833038	.	+	.	ID=GCA000560365_02783_gene;locus_tag=GCA000560365_02783;gene=icaB
contig_1	Pyrodigal	CDS	2832166	2833038	.	+	0	ID=GCA000560365_02783;Name=N-deacetylase%2C involved in polysaccharide intercellular adhesin(PIA) synthesis;locus_tag=GCA000560365_02783;product=N-deacetylase%2C involved in polysaccharide intercellular adhesin(PIA) synthesis;Dbxref=GO:0000271,GO:0005576,GO:0005975,GO:0016811,GO:0019213;gene=icaB;Parent=GCA000560365_02783_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0726,COG:GM,KEGG:K21478,RefSeq:WP_000877317.1,SO:0001217,UniParc:UPI00000DA049,UniRef:UniRef100_Q9RQP7,UniRef:UniRef50_Q9RQP7,UniRef:UniRef90_Q9RQP7,VFDB:VFC0271,VFDB:VFG001287;ec_number=3.5.1.-
contig_1	Pyrodigal	gene	2833025	2834077	.	+	.	ID=GCA000560365_02784_gene;locus_tag=GCA000560365_02784;gene=icaC
contig_1	Pyrodigal	CDS	2833025	2834077	.	+	0	ID=GCA000560365_02784;Name=polysaccharide intercellular adhesin biosynthesis/export protein IcaC;locus_tag=GCA000560365_02784;product=polysaccharide intercellular adhesin biosynthesis/export protein IcaC;Dbxref=GO:0005886,GO:0009246,GO:0016413;gene=icaC;Parent=GCA000560365_02784_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000723836,BlastRules:WP_002470903,COG:COG3936,COG:G,KEGG:K21462,NCBIProtein:AUU58561.1,RefSeq:WP_000723836.1,SO:0001217,UniParc:UPI0000054957,UniRef:UniRef100_Q9RQP6,UniRef:UniRef50_Q5HKP7,UniRef:UniRef90_Q9RQP6
contig_1	Infernal	gene	2834190	2834442	.	+	.	ID=GCA000560365_02785_gene;locus_tag=GCA000560365_02785;gene=S35
contig_1	Infernal	ncRNA	2834190	2834442	3.4e-14	+	.	ID=GCA000560365_02785;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000560365_02785;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;Parent=GCA000560365_02785_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_1	Pyrodigal	gene	2834524	2836569	.	-	.	ID=GCA000560365_02786_gene;locus_tag=GCA000560365_02786;gene=lip1
contig_1	Pyrodigal	CDS	2834524	2836569	.	-	0	ID=GCA000560365_02786;Name=YSIRK domain-containing triacylglycerol lipase Lip1;locus_tag=GCA000560365_02786;product=YSIRK domain-containing triacylglycerol lipase Lip1;Dbxref=GO:0004806,GO:0005509,GO:0005576,GO:0016042,GO:0016298,GO:0046872;gene=lip1;Parent=GCA000560365_02786_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000842036,COG:COG1075,COG:I,KEGG:K01046,SO:0001217,UniParc:UPI00000DA04A,UniRef:UniRef100_Q2FUU5,UniRef:UniRef50_Q6GDD3,UniRef:UniRef90_P65288;ec_number=3.1.1.3
contig_1	Pyrodigal	gene	2837659	2838291	.	-	.	ID=GCA000560365_02787_gene;locus_tag=GCA000560365_02787;gene=hisIE
contig_1	Pyrodigal	CDS	2837659	2838291	.	-	0	ID=GCA000560365_02787;Name=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;locus_tag=GCA000560365_02787;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;Dbxref=GO:0000105,GO:0004635,GO:0004636,GO:0005524,GO:0005737;gene=hisIE;Parent=GCA000560365_02787_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000170492.1,SO:0001217,UniParc:UPI0000696CF6,UniRef:UniRef100_Q2FUU3,UniRef:UniRef50_P64355,UniRef:UniRef90_P64355;ec_number=3.6.1.31
contig_1	Pyrodigal	gene	2838288	2839046	.	-	.	ID=GCA000560365_02788_gene;locus_tag=GCA000560365_02788;gene=hisF
contig_1	Pyrodigal	CDS	2838288	2839046	.	-	0	ID=GCA000560365_02788;Name=Imidazole glycerol phosphate synthase subunit HisF;locus_tag=GCA000560365_02788;product=Imidazole glycerol phosphate synthase subunit HisF;Dbxref=GO:0000105,GO:0000107,GO:0005737,GO:0016829;gene=hisF;Parent=GCA000560365_02788_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI000012C83B,UniRef:UniRef100_Q2FDI8,UniRef:UniRef50_Q9X0C6,UniRef:UniRef90_P64361;ec_number=4.3.2.10
contig_1	Pyrodigal	gene	2839043	2839747	.	-	.	ID=GCA000560365_02789_gene;locus_tag=GCA000560365_02789;gene=hisA
contig_1	Pyrodigal	CDS	2839043	2839747	.	-	0	ID=GCA000560365_02789;Name=1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase;locus_tag=GCA000560365_02789;product=1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase;Dbxref=GO:0000105,GO:0000162,GO:0003949,GO:0005737;gene=hisA;Parent=GCA000560365_02789_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0106,COG:E,RefSeq:WP_000571736.1,SO:0001217,UniParc:UPI000005495B,UniRef:UniRef100_Q2FUU2,UniRef:UniRef50_Q2FUU2,UniRef:UniRef90_Q2FUU2;ec_number=5.3.1.16
contig_1	Pyrodigal	gene	2839740	2840318	.	-	.	ID=GCA000560365_02790_gene;locus_tag=GCA000560365_02790;gene=hisH
contig_1	Pyrodigal	CDS	2839740	2840318	.	-	0	ID=GCA000560365_02790;Name=imidazole glycerol phosphate synthase subunit HisH;locus_tag=GCA000560365_02790;product=imidazole glycerol phosphate synthase subunit HisH;Dbxref=GO:0000105,GO:0000107,GO:0004359,GO:0005737,GO:0016829;gene=hisH;Parent=GCA000560365_02790_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0118,COG:E,RefSeq:WP_000635623.1,SO:0001217,UniParc:UPI000005495C,UniRef:UniRef100_Q5HCM2,UniRef:UniRef50_Q4A047,UniRef:UniRef90_Q5HCM2;ec_number=4.3.2.10
contig_1	Pyrodigal	gene	2840315	2840893	.	-	.	ID=GCA000560365_02791_gene;locus_tag=GCA000560365_02791;gene=hisB
contig_1	Pyrodigal	CDS	2840315	2840893	.	-	0	ID=GCA000560365_02791;Name=imidazoleglycerol-phosphate dehydratase HisB;locus_tag=GCA000560365_02791;product=imidazoleglycerol-phosphate dehydratase HisB;Dbxref=GO:0000105,GO:0004424,GO:0005737;gene=hisB;Parent=GCA000560365_02791_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0131,COG:E,RefSeq:WP_000640266.1,SO:0001217,UniParc:UPI000012C871,UniRef:UniRef100_Q2FUU0,UniRef:UniRef50_Q2FUU0,UniRef:UniRef90_Q2FUU0;ec_number=4.2.1.19
contig_1	Pyrodigal	gene	2840862	2841875	.	-	.	ID=GCA000560365_02792_gene;locus_tag=GCA000560365_02792;gene=hisC
contig_1	Pyrodigal	CDS	2840862	2841875	.	-	0	ID=GCA000560365_02792;Name=Putative pyridoxal phosphate-dependent acyltransferase;locus_tag=GCA000560365_02792;product=Putative pyridoxal phosphate-dependent acyltransferase;gene=hisC;Parent=GCA000560365_02792_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0079,COG:E,RefSeq:WP_000639183.1,SO:0001217,UniParc:UPI000005495F,UniRef:UniRef100_Q2FUT9,UniRef:UniRef50_A0A389Q8Y1,UniRef:UniRef90_A0A389Q8Y1
contig_1	Pyrodigal	gene	2841891	2843141	.	-	.	ID=GCA000560365_02793_gene;locus_tag=GCA000560365_02793;gene=hisD
contig_1	Pyrodigal	CDS	2841891	2843141	.	-	0	ID=GCA000560365_02793;Name=histidinol dehydrogenase;locus_tag=GCA000560365_02793;product=histidinol dehydrogenase;Dbxref=GO:0000105,GO:0004399,GO:0005829,GO:0008270,GO:0051287;gene=hisD;Parent=GCA000560365_02793_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0141,COG:E,KEGG:K00013,RefSeq:WP_000930643.1,SO:0001217,UniParc:UPI0000696CF7,UniRef:UniRef100_Q5HCL9,UniRef:UniRef50_Q8CQ95,UniRef:UniRef90_P63952;ec_number=1.1.1.23
contig_1	Pyrodigal	gene	2843134	2843748	.	-	.	ID=GCA000560365_02794_gene;locus_tag=GCA000560365_02794;gene=hisG
contig_1	Pyrodigal	CDS	2843134	2843748	.	-	0	ID=GCA000560365_02794;Name=ATP phosphoribosyltransferase;locus_tag=GCA000560365_02794;product=ATP phosphoribosyltransferase;Dbxref=GO:0000105,GO:0003879,GO:0005524,GO:0005737;gene=hisG;Parent=GCA000560365_02794_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0040,COG:E,KEGG:K00765,RefSeq:WP_000944150.1,SO:0001217,UniParc:UPI0000696CF8,UniRef:UniRef100_Q2FDI2,UniRef:UniRef50_Q2FUT7,UniRef:UniRef90_Q2FUT7;ec_number=2.4.2.17
contig_1	Pyrodigal	gene	2843766	2844584	.	-	.	ID=GCA000560365_02795_gene;locus_tag=GCA000560365_02795;gene=hisZ
contig_1	Pyrodigal	CDS	2843766	2844584	.	-	0	ID=GCA000560365_02795;Name=ATP phosphoribosyltransferase regulatory subunit;locus_tag=GCA000560365_02795;product=ATP phosphoribosyltransferase regulatory subunit;Dbxref=GO:0000105,GO:0005737,GO:0016740;gene=hisZ;Parent=GCA000560365_02795_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3705,COG:E,RefSeq:WP_001065590.1,SO:0001217,UniParc:UPI00004B5D24,UniRef:UniRef100_Q2FUT6,UniRef:UniRef50_Q2FUT6,UniRef:UniRef90_Q2FUT6
contig_1	Pyrodigal	gene	2844889	2846013	.	-	.	ID=GCA000560365_02796_gene;locus_tag=GCA000560365_02796
contig_1	Pyrodigal	CDS	2844889	2846013	.	-	0	ID=GCA000560365_02796;Name=NodB-like y domain-containing protein;locus_tag=GCA000560365_02796;product=NodB-like y domain-containing protein;Parent=GCA000560365_02796_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000549223.1,SO:0001217,UniParc:UPI0000054963,UniRef:UniRef100_Q2FUT5,UniRef:UniRef50_Q2FUT5,UniRef:UniRef90_Q2FUT5
contig_1	Pyrodigal	gene	2846131	2846628	.	-	.	ID=GCA000560365_02797_gene;locus_tag=GCA000560365_02797;gene=rimL
contig_1	Pyrodigal	CDS	2846131	2846628	.	-	0	ID=GCA000560365_02797;Name=N-acetyltransferase domain-containing protein;locus_tag=GCA000560365_02797;product=N-acetyltransferase domain-containing protein;gene=rimL;Parent=GCA000560365_02797_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1670,COG:JO,RefSeq:WP_000610978.1,SO:0001217,UniParc:UPI0000054964,UniRef:UniRef100_Q2FUT4,UniRef:UniRef50_Q2FUT4,UniRef:UniRef90_Q2FUT4
contig_1	Pyrodigal	gene	2846675	2847508	.	-	.	ID=GCA000560365_02798_gene;locus_tag=GCA000560365_02798;gene=ecfT
contig_1	Pyrodigal	CDS	2846675	2847508	.	-	0	ID=GCA000560365_02798;Name=Energy-coupling factor transporter transmembrane protein EcfT;locus_tag=GCA000560365_02798;product=Energy-coupling factor transporter transmembrane protein EcfT;gene=ecfT;Parent=GCA000560365_02798_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0619,COG:H,KEGG:K16785,RefSeq:WP_001077826.1,SO:0001217,UniParc:UPI0000054965,UniRef:UniRef100_Q2FUT3,UniRef:UniRef50_A0A3A1YCN1,UniRef:UniRef90_Q2FUT3
contig_1	Pyrodigal	gene	2847505	2849217	.	-	.	ID=GCA000560365_02799_gene;locus_tag=GCA000560365_02799;gene=ecfA2
contig_1	Pyrodigal	CDS	2847505	2849217	.	-	0	ID=GCA000560365_02799;Name=energy-coupling factor transporter ATPase;locus_tag=GCA000560365_02799;product=energy-coupling factor transporter ATPase;Dbxref=GO:0005524,GO:0006810,GO:0009898,GO:0016887,GO:0042626,GO:0043190;gene=ecfA2;Parent=GCA000560365_02799_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1122,COG:PR,RefSeq:WP_000138648.1,SO:0001217,UniParc:UPI0000696CF9,UniRef:UniRef100_A0A0E8I7J5,UniRef:UniRef50_Q7A342,UniRef:UniRef90_Q7A342;ec_number=7.-.-.-
contig_1	Pyrodigal	gene	2849270	2849824	.	-	.	ID=GCA000560365_02800_gene;locus_tag=GCA000560365_02800;gene=eCF-S
contig_1	Pyrodigal	CDS	2849270	2849824	.	-	0	ID=GCA000560365_02800;Name=ECF-type riboflavin transporter substrate-binding protein;locus_tag=GCA000560365_02800;product=ECF-type riboflavin transporter substrate-binding protein;Dbxref=GO:0005886,GO:0016020;gene=eCF-S;Parent=GCA000560365_02800_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4720,COG:H,KEGG:K16924,RefSeq:WP_000743717.1,SO:0001217,UniParc:UPI00004B5D26,UniRef:UniRef100_Q2FUT1,UniRef:UniRef50_Q2FUT1,UniRef:UniRef90_Q2FUT1
contig_1	Pyrodigal	gene	2849853	2850701	.	-	.	ID=GCA000560365_02801_gene;locus_tag=GCA000560365_02801
contig_1	Pyrodigal	CDS	2849853	2850701	.	-	0	ID=GCA000560365_02801;Name=DNA-directed RNA polymerase subunit delta;locus_tag=GCA000560365_02801;product=DNA-directed RNA polymerase subunit delta;Parent=GCA000560365_02801_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1912,COG:HV,RefSeq:WP_000528923.1,SO:0001217,UniParc:UPI0000054968,UniRef:UniRef100_Q2FUT0,UniRef:UniRef50_A0A2L0D2I0,UniRef:UniRef90_Q2FUT0
contig_1	Pyrodigal	gene	2851081	2851596	.	+	.	ID=GCA000560365_02802_gene;locus_tag=GCA000560365_02802;gene=yceI
contig_1	Pyrodigal	CDS	2851081	2851596	.	+	0	ID=GCA000560365_02802;Name=UPF0312 protein SAOUHSC_03022;locus_tag=GCA000560365_02802;product=UPF0312 protein SAOUHSC_03022;gene=yceI;Parent=GCA000560365_02802_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2353,COG:R,RefSeq:WP_000181129.1,SO:0001217,UniParc:UPI000005496A,UniRef:UniRef100_Q2FUS9,UniRef:UniRef50_Q2FUS9,UniRef:UniRef90_Q2FUS9
contig_1	Pyrodigal	gene	2851745	2852719	.	-	.	ID=GCA000560365_02803_gene;locus_tag=GCA000560365_02803;gene=drp35
contig_1	Pyrodigal	CDS	2851745	2852719	.	-	0	ID=GCA000560365_02803;Name=Lactonase drp35;locus_tag=GCA000560365_02803;product=Lactonase drp35;Dbxref=GO:0005737,GO:0016787,GO:0046872;gene=drp35;Parent=GCA000560365_02803_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3386,COG:G,KEGG:K02352,SO:0001217,UniParc:UPI00000CAC56,UniRef:UniRef100_Q2FUS8,UniRef:UniRef50_Q9S0S3,UniRef:UniRef90_Q9S0S3;ec_number=3.1.1.-
contig_1	Pyrodigal	gene	2852960	2853916	.	+	.	ID=GCA000560365_02804_gene;locus_tag=GCA000560365_02804;gene=trhO
contig_1	Pyrodigal	CDS	2852960	2853916	.	+	0	ID=GCA000560365_02804;Name=rhodanese-related sulfurtransferase;locus_tag=GCA000560365_02804;product=rhodanese-related sulfurtransferase;Dbxref=GO:0006400,GO:0016705;gene=trhO;Parent=GCA000560365_02804_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1054,COG:J,KEGG:K07146,RefSeq:WP_001109273.1,SO:0001217,UniParc:UPI000005496C,UniRef:UniRef100_Q2FUS7,UniRef:UniRef50_Q2NIJ6,UniRef:UniRef90_Q2FUS7;ec_number=1.14.-.-
contig_1	Pyrodigal	gene	2854068	2854706	.	+	.	ID=GCA000560365_02805_gene;locus_tag=GCA000560365_02805;gene=pcp
contig_1	Pyrodigal	CDS	2854068	2854706	.	+	0	ID=GCA000560365_02805;Name=pyroglutamyl-peptidase I;locus_tag=GCA000560365_02805;product=pyroglutamyl-peptidase I;Dbxref=GO:0005829,GO:0006508,GO:0008234,GO:0016920;gene=pcp;Parent=GCA000560365_02805_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2039,COG:O,KEGG:K01304,RefSeq:WP_000547833.1,SO:0001217,UniParc:UPI000005496D,UniRef:UniRef100_Q2FUS6,UniRef:UniRef50_Q53596,UniRef:UniRef90_Q53596;ec_number=3.4.19.3
contig_1	Pyrodigal	gene	2854825	2855592	.	-	.	ID=GCA000560365_02806_gene;locus_tag=GCA000560365_02806
contig_1	Pyrodigal	CDS	2854825	2855592	.	-	0	ID=GCA000560365_02806;Name=DUF1129 domain-containing protein;locus_tag=GCA000560365_02806;product=DUF1129 domain-containing protein;Parent=GCA000560365_02806_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000949560.1,SO:0001217,UniParc:UPI00004B5D29,UniRef:UniRef100_Q2FUS5,UniRef:UniRef50_A0A7U7JRQ9,UniRef:UniRef90_A0A7U7JRQ9
contig_1	Pyrodigal	gene	2855582	2855920	.	-	.	ID=GCA000560365_02807_gene;locus_tag=GCA000560365_02807;gene=padR
contig_1	Pyrodigal	CDS	2855582	2855920	.	-	0	ID=GCA000560365_02807;Name=Transcription regulator PadR N-terminal domain-containing protein;locus_tag=GCA000560365_02807;product=Transcription regulator PadR N-terminal domain-containing protein;gene=padR;Parent=GCA000560365_02807_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1695,COG:K,RefSeq:WP_000116417.1,SO:0001217,UniParc:UPI00004B5D2A,UniRef:UniRef100_Q2FUS4,UniRef:UniRef50_Q2FUS4,UniRef:UniRef90_Q2FUS4
contig_1	Pyrodigal	gene	2856087	2856551	.	+	.	ID=GCA000560365_02808_gene;locus_tag=GCA000560365_02808;gene=bstA
contig_1	Pyrodigal	CDS	2856087	2856551	.	+	0	ID=GCA000560365_02808;Name=bacillithiol transferase BstA;locus_tag=GCA000560365_02808;product=bacillithiol transferase BstA;gene=bstA;Parent=GCA000560365_02808_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000208915,BlastRules:WP_003243944,RefSeq:WP_000208915.1,SO:0001217,UniParc:UPI00004B5D2B,UniRef:UniRef100_Q2FUS3,UniRef:UniRef50_Q2FUS3,UniRef:UniRef90_Q2FUS3
contig_1	Pyrodigal	gene	2856789	2858207	.	+	.	ID=GCA000560365_02809_gene;locus_tag=GCA000560365_02809;gene=citT
contig_1	Pyrodigal	CDS	2856789	2858207	.	+	0	ID=GCA000560365_02809;Name=2-oxoglutarate/malate translocator-like proteinue;locus_tag=GCA000560365_02809;product=2-oxoglutarate/malate translocator-like proteinue;gene=citT;Parent=GCA000560365_02809_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0471,COG:G,KEGG:K03319,RefSeq:WP_000432356.1,SO:0001217,UniParc:UPI00000522E4,UniRef:UniRef100_Q2FUS2,UniRef:UniRef50_Q7WS08,UniRef:UniRef90_Q7WS08
contig_1	Pyrodigal	gene	2858620	2859528	.	-	.	ID=GCA000560365_02810_gene;locus_tag=GCA000560365_02810;gene=rarD
contig_1	Pyrodigal	CDS	2858620	2859528	.	-	0	ID=GCA000560365_02810;Name=EamA family transporter RarD;locus_tag=GCA000560365_02810;product=EamA family transporter RarD;Dbxref=GO:0005215,GO:0005886,GO:0006810;gene=rarD;Parent=GCA000560365_02810_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2962,COG:R,KEGG:K05786,RefSeq:WP_001083804.1,SO:0001217,UniParc:UPI00004B5D2C,UniRef:UniRef100_Q2FUS1,UniRef:UniRef50_Q2FUS1,UniRef:UniRef90_Q2FUS1
contig_1	Pyrodigal	gene	2859753	2860328	.	+	.	ID=GCA000560365_02811_gene;locus_tag=GCA000560365_02811
contig_1	Pyrodigal	CDS	2859753	2860328	.	+	0	ID=GCA000560365_02811;Name=DNA-binding protein;locus_tag=GCA000560365_02811;product=DNA-binding protein;Parent=GCA000560365_02811_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000174578.1,SO:0001217,UniParc:UPI0000054973,UniRef:UniRef100_Q2FUS0,UniRef:UniRef50_Q2FUS0,UniRef:UniRef90_Q2FUS0
contig_1	Pyrodigal	gene	2860493	2861509	.	+	.	ID=GCA000560365_02812_gene;locus_tag=GCA000560365_02812;gene=nixA
contig_1	Pyrodigal	CDS	2860493	2861509	.	+	0	ID=GCA000560365_02812;Name=Nickel transporter NixA;locus_tag=GCA000560365_02812;product=Nickel transporter NixA;Dbxref=GO:0005886,GO:0015099;gene=nixA;Parent=GCA000560365_02812_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3376,COG:P,KEGG:K07241,RefSeq:WP_000215642.1,SO:0001217,UniParc:UPI0000696CFA,UniRef:UniRef100_Q2FUR9,UniRef:UniRef50_Q2FUR9,UniRef:UniRef90_Q2FUR9
contig_1	Pyrodigal	gene	2861752	2862546	.	+	.	ID=GCA000560365_02813_gene;locus_tag=GCA000560365_02813;gene=nhoA
contig_1	Pyrodigal	CDS	2861752	2862546	.	+	0	ID=GCA000560365_02813;Name=Arylamine N-acetyltransferase;locus_tag=GCA000560365_02813;product=Arylamine N-acetyltransferase;gene=nhoA;Parent=GCA000560365_02813_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2162,COG:Q,RefSeq:WP_001017423.1,SO:0001217,UniParc:UPI00004B5D2D,UniRef:UniRef100_Q2FUR8,UniRef:UniRef50_Q2FUR8,UniRef:UniRef90_Q2FUR8
contig_1	Pyrodigal	gene	2862680	2863192	.	-	.	ID=GCA000560365_02814_gene;locus_tag=GCA000560365_02814;gene=hdeD
contig_1	Pyrodigal	CDS	2862680	2863192	.	-	0	ID=GCA000560365_02814;Name=HdeD family acid-resistance protein;locus_tag=GCA000560365_02814;product=HdeD family acid-resistance protein;gene=hdeD;Parent=GCA000560365_02814_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3247,COG:R,RefSeq:WP_000410771.1,SO:0001217,UniParc:UPI00004B5D2E,UniRef:UniRef100_Q2FUR7,UniRef:UniRef50_Q2FUR7,UniRef:UniRef90_Q2FUR7
contig_1	Pyrodigal	gene	2863475	2864233	.	+	.	ID=GCA000560365_02815_gene;locus_tag=GCA000560365_02815;gene=vraD
contig_1	Pyrodigal	CDS	2863475	2864233	.	+	0	ID=GCA000560365_02815;Name=peptide resistance ABC transporter ATP-binding subunit VraD;locus_tag=GCA000560365_02815;product=peptide resistance ABC transporter ATP-binding subunit VraD;gene=vraD;Parent=GCA000560365_02815_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000154162,COG:COG1136,COG:M,RefSeq:WP_000154162.1,SO:0001217,UniParc:UPI0000054977,UniRef:UniRef100_Q2FUR6,UniRef:UniRef50_O34697,UniRef:UniRef90_A0A0Z4JTA0
contig_1	Pyrodigal	gene	2864223	2866103	.	+	.	ID=GCA000560365_02816_gene;locus_tag=GCA000560365_02816;gene=vraE
contig_1	Pyrodigal	CDS	2864223	2866103	.	+	0	ID=GCA000560365_02816;Name=peptide resistance ABC transporter permease subunit VraE;locus_tag=GCA000560365_02816;product=peptide resistance ABC transporter permease subunit VraE;gene=vraE;Parent=GCA000560365_02816_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000143649,KEGG:K11632,RefSeq:WP_000143642.1,SO:0001217,UniParc:UPI00004B5D2F,UniRef:UniRef100_A0A0E7PD33,UniRef:UniRef50_Q9KWJ6,UniRef:UniRef90_Q9KWJ6
contig_1	Pyrodigal	gene	2866196	2866387	.	+	.	ID=GCA000560365_02817_gene;locus_tag=GCA000560365_02817;gene=vraH
contig_1	Pyrodigal	CDS	2866196	2866387	.	+	0	ID=GCA000560365_02817;Name=peptide resistance ABC transporter activity modulator VraH;locus_tag=GCA000560365_02817;product=peptide resistance ABC transporter activity modulator VraH;gene=vraH;Parent=GCA000560365_02817_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000672038,RefSeq:WP_000672038.1,SO:0001217,UniParc:UPI0000054979,UniRef:UniRef100_A0A1M3SJC8,UniRef:UniRef50_Q5HS20,UniRef:UniRef90_A0A7Z7R167
contig_1	Pyrodigal	gene	2866399	2866935	.	+	.	ID=GCA000560365_02818_gene;locus_tag=GCA000560365_02818
contig_1	Pyrodigal	CDS	2866399	2866935	.	+	0	ID=GCA000560365_02818;Name=IS30 family transposase;locus_tag=GCA000560365_02818;product=IS30 family transposase;Dbxref=GO:0004803;Parent=GCA000560365_02818_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_001549881.1,SO:0001217,UniParc:UPI00004B5D30,UniRef:UniRef100_Q2FUR3,UniRef:UniRef50_B9E9N8,UniRef:UniRef90_A0A380END2
contig_1	Pyrodigal	gene	2866995	2867492	.	-	.	ID=GCA000560365_02819_gene;locus_tag=GCA000560365_02819
contig_1	Pyrodigal	CDS	2866995	2867492	.	-	0	ID=GCA000560365_02819;Name=Phage tail protein;locus_tag=GCA000560365_02819;product=Phage tail protein;Parent=GCA000560365_02819_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000586232.1,SO:0001217,UniParc:UPI000005497B,UniRef:UniRef100_Q2FUR2,UniRef:UniRef50_Q2FUR2,UniRef:UniRef90_Q2FUR2
contig_1	Pyrodigal	gene	2867950	2868141	.	+	.	ID=GCA000560365_02820_gene;locus_tag=GCA000560365_02820;gene=vraH
contig_1	Pyrodigal	CDS	2867950	2868141	.	+	0	ID=GCA000560365_02820;Name=peptide resistance ABC transporter activity modulator VraH;locus_tag=GCA000560365_02820;product=peptide resistance ABC transporter activity modulator VraH;gene=vraH;Parent=GCA000560365_02820_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000672038,RefSeq:WP_000672039.1,SO:0001217,UniParc:UPI000005497E,UniRef:UniRef100_X5E1M5,UniRef:UniRef50_Q5HS20,UniRef:UniRef90_A0A7Z7R167
contig_1	Pyrodigal	gene	2868534	2868734	.	+	.	ID=GCA000560365_02821_gene;locus_tag=GCA000560365_02821;gene=cspA
contig_1	Pyrodigal	CDS	2868534	2868734	.	+	0	ID=GCA000560365_02821;Name=Cold shock protein CspA;locus_tag=GCA000560365_02821;product=Cold shock protein CspA;gene=cspA;Parent=GCA000560365_02821_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1278,COG:K,KEGG:K03704,RefSeq:WP_001059079.1,SO:0001217,UniParc:UPI00000D77A7,UniRef:UniRef100_Q2FUQ9,UniRef:UniRef50_P0C0F1,UniRef:UniRef90_Q2FUQ9
contig_1	Pyrodigal	gene	2868861	2869430	.	-	.	ID=GCA000560365_02822_gene;locus_tag=GCA000560365_02822;gene=xRE
contig_1	Pyrodigal	CDS	2868861	2869430	.	-	0	ID=GCA000560365_02822;Name=Transcriptional regulator;locus_tag=GCA000560365_02822;product=Transcriptional regulator;gene=xRE;Parent=GCA000560365_02822_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1476,COG:K,RefSeq:WP_001054118.1,SO:0001217,UniParc:UPI00000DA05D,UniRef:UniRef100_Q2FUQ8,UniRef:UniRef50_A0A0H2VIN2,UniRef:UniRef90_A0A391EYF8
contig_1	Pyrodigal	gene	2869690	2870085	.	-	.	ID=GCA000560365_02823_gene;locus_tag=GCA000560365_02823
contig_1	Pyrodigal	CDS	2869690	2870085	.	-	0	ID=GCA000560365_02823;Name=DUF3147 domain-containing protein;locus_tag=GCA000560365_02823;product=DUF3147 domain-containing protein;Parent=GCA000560365_02823_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000779136.1,SO:0001217,UniParc:UPI0000054982,UniRef:UniRef100_Q2FUQ7,UniRef:UniRef50_Q2FUQ7,UniRef:UniRef90_Q2FUQ7
contig_1	Pyrodigal	gene	2870153	2870506	.	-	.	ID=GCA000560365_02824_gene;locus_tag=GCA000560365_02824
contig_1	Pyrodigal	CDS	2870153	2870506	.	-	0	ID=GCA000560365_02824;Name=Permease;locus_tag=GCA000560365_02824;product=Permease;Parent=GCA000560365_02824_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000491382.1,SO:0001217,UniParc:UPI00000D771D,UniRef:UniRef100_Q2FUQ6,UniRef:UniRef50_Q2FUQ6,UniRef:UniRef90_Q2FUQ6
##sequence-region contig_2 1 6081
contig_2	Bakta	region	1	6081	.	+	.	ID=contig_2;Name=contig_2
contig_2	Infernal	gene	1	92	.	+	.	ID=GCA000560365_02825_gene;locus_tag=GCA000560365_02825;gene=S35;pseudo=True
contig_2	Infernal	ncRNA	1	92	9.5e-10	+	.	ID=GCA000560365_02825;Name=Staphylococcus sRNA 35 (srn_0335);locus_tag=GCA000560365_02825;product=Staphylococcus sRNA 35 (srn_0335);Dbxref=RFAM:RF02894;pseudo=True;Parent=GCA000560365_02825_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02894
contig_2	Pyrodigal	gene	220	1059	.	-	.	ID=GCA000560365_02826_gene;locus_tag=GCA000560365_02826;gene=noc
contig_2	Pyrodigal	CDS	220	1059	.	-	0	ID=GCA000560365_02826;Name=nucleoid occlusion protein;locus_tag=GCA000560365_02826;product=nucleoid occlusion protein;Dbxref=GO:0032466,GO:0043565;gene=noc;Parent=GCA000560365_02826_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1475,COG:D,KEGG:K03497,RefSeq:WP_000742837.1,SO:0001217,UniParc:UPI0000054984,UniRef:UniRef100_Q2FUQ5,UniRef:UniRef50_A0A6N3FL57,UniRef:UniRef90_Q2FUQ5
contig_2	Pyrodigal	gene	1102	1821	.	-	.	ID=GCA000560365_02827_gene;locus_tag=GCA000560365_02827;gene=rsmG
contig_2	Pyrodigal	CDS	1102	1821	.	-	0	ID=GCA000560365_02827;Name=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;locus_tag=GCA000560365_02827;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;Dbxref=GO:0005829,GO:0008168,GO:0031167,GO:0046118,GO:0070043;gene=rsmG;Parent=GCA000560365_02827_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0357,COG:J,KEGG:K03501,RefSeq:WP_000215595.1,SO:0001217,UniParc:UPI0000054985,UniRef:UniRef100_Q2FUQ4,UniRef:UniRef50_P25813,UniRef:UniRef90_Q2FUQ4;ec_number=2.1.1.170
contig_2	Pyrodigal	gene	1821	3698	.	-	.	ID=GCA000560365_02828_gene;locus_tag=GCA000560365_02828;gene=mnmG
contig_2	Pyrodigal	CDS	1821	3698	.	-	0	ID=GCA000560365_02828;Name=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;locus_tag=GCA000560365_02828;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;Dbxref=GO:0002098,GO:0005829,GO:0008033,GO:0030488,GO:0050660;gene=mnmG;Parent=GCA000560365_02828_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0445,COG:J,KEGG:K03495,RefSeq:WP_000249662.1,SO:0001217,UniParc:UPI000005228D,UniRef:UniRef100_Q2FUQ3,UniRef:UniRef50_Q2FUQ3,UniRef:UniRef90_Q2FUQ3
contig_2	Pyrodigal	gene	3765	5144	.	-	.	ID=GCA000560365_02829_gene;locus_tag=GCA000560365_02829;gene=mnmE
contig_2	Pyrodigal	CDS	3765	5144	.	-	0	ID=GCA000560365_02829;Name=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;locus_tag=GCA000560365_02829;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;Dbxref=GO:0002098,GO:0003924,GO:0005525,GO:0005829,GO:0006400,GO:0030488,GO:0046872;gene=mnmE;Parent=GCA000560365_02829_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_000362503.1,SO:0001217,UniParc:UPI00004B5D33,UniRef:UniRef100_Q2FDE8,UniRef:UniRef50_Q8DPZ8,UniRef:UniRef90_Q931E1;ec_number=3.6.-.-
contig_2	Pyrodigal	gene	5283	5630	.	-	.	ID=GCA000560365_02830_gene;locus_tag=GCA000560365_02830;gene=rnpA
contig_2	Pyrodigal	CDS	5283	5630	.	-	0	ID=GCA000560365_02830;Name=ribonuclease P protein component;locus_tag=GCA000560365_02830;product=ribonuclease P protein component;Dbxref=GO:0000049,GO:0001682,GO:0004526,GO:0008033,GO:0030677,GO:0042781;gene=rnpA;Parent=GCA000560365_02830_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0594,COG:J,SO:0001217,UniParc:UPI0000134441,UniRef:UniRef100_Q5HCI2,UniRef:UniRef50_Q2FUQ1,UniRef:UniRef90_Q2FUQ1;ec_number=3.1.26.5
contig_2	Pyrodigal	gene	5757	5894	.	-	.	ID=GCA000560365_02831_gene;locus_tag=GCA000560365_02831;gene=rpmH
contig_2	Pyrodigal	CDS	5757	5894	.	-	0	ID=GCA000560365_02831;Name=50S ribosomal protein L34;locus_tag=GCA000560365_02831;product=50S ribosomal protein L34;Dbxref=GO:0000315,GO:0003735,GO:0005840,GO:0006412,GO:0022625,GO:1990904;gene=rpmH;Parent=GCA000560365_02831_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0230,COG:J,KEGG:K02914,RefSeq:WP_000240855.1,SO:0001217,UniParc:UPI0000133FD1,UniRef:UniRef100_Q2FUQ0,UniRef:UniRef50_A5VMV2,UniRef:UniRef90_Q2FUQ0