##gff-version 3 ##feature-ontology https://github.com/The-Sequence-Ontology/SO-Ontologies/blob/v3.1/so.obo # organism Aggregatibacter actinomycetemcomitans PN_728 # Annotated with Bakta # Software: v1.11.4 # Database: v6.0, full # DOI: 10.1099/mgen.0.000685 # URL: github.com/oschwengers/bakta ##sequence-region contig_1 1 290678 contig_1 Bakta region 1 290678 . + . ID=contig_1;Name=contig_1 contig_1 Pyrodigal gene 11 925 . - . ID=GCA008085315_00001_gene;locus_tag=GCA008085315_00001;gene=nagK contig_1 Pyrodigal CDS 11 925 . - 0 ID=GCA008085315_00001;Name=N-acetylglucosamine kinase;locus_tag=GCA008085315_00001;product=N-acetylglucosamine kinase;Dbxref=GO:0045127;gene=nagK;Parent=GCA008085315_00001_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1940,COG:GK,RefSeq:WP_005547816.1,SO:0001217,UniParc:UPI0001B9F84E,UniRef:UniRef100_UPI0001B9F84E,UniRef:UniRef50_P44554,UniRef:UniRef90_E6KX06;ec_number=2.7.1.59 contig_1 Pyrodigal gene 975 1715 . - . ID=GCA008085315_00002_gene;locus_tag=GCA008085315_00002 contig_1 Pyrodigal CDS 975 1715 . - 0 ID=GCA008085315_00002;Name=undecaprenyl-diphosphate phosphatase;locus_tag=GCA008085315_00002;product=undecaprenyl-diphosphate phosphatase;Parent=GCA008085315_00002_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01096,RefSeq:WP_005547817.1,SO:0001217,UniParc:UPI00022AC0FE,UniRef:UniRef100_UPI00022AC0FE,UniRef:UniRef50_P44570,UniRef:UniRef90_A0A5D0ELE2;ec_number=3.6.1.75 contig_1 Pyrodigal gene 1792 2445 . + . ID=GCA008085315_00003_gene;locus_tag=GCA008085315_00003;gene=ribA contig_1 Pyrodigal CDS 1792 2445 . + 0 ID=GCA008085315_00003;Name=GTP cyclohydrolase-2;locus_tag=GCA008085315_00003;product=GTP cyclohydrolase-2;gene=ribA;Parent=GCA008085315_00003_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0807,COG:H,RefSeq:WP_148320573.1,SO:0001217,UniParc:UPI0011D5D82A,UniRef:UniRef100_UPI0011D5D82A,UniRef:UniRef50_P0A7I7,UniRef:UniRef90_Q9JRR0 contig_1 Pyrodigal gene 2724 3461 . + . ID=GCA008085315_00004_gene;locus_tag=GCA008085315_00004 contig_1 Pyrodigal CDS 2724 3461 . + 0 ID=GCA008085315_00004;Name=Orf14 protein;locus_tag=GCA008085315_00004;product=Orf14 protein;Parent=GCA008085315_00004_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_Q9JRR1,UniRef:UniRef90_Q9JRR1 contig_1 Pyrodigal gene 3627 4049 . - . ID=GCA008085315_00005_gene;locus_tag=GCA008085315_00005;gene=rfbB;pseudogene=unitary contig_1 Pyrodigal CDS 3627 4049 . - 0 ID=GCA008085315_00005;Name=dTDP-glucose 4%2C6-dehydratase;locus_tag=GCA008085315_00005;product=dTDP-glucose 4%2C6-dehydratase;Dbxref=GO:0008460,GO:0009225,GO:0019305;pseudogene=unitary;gene=rfbB;Parent=GCA008085315_00005_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A448TV88,UniRef:UniRef90_A0A5D0ELP4;ec_number=4.2.1.46 contig_1 Pyrodigal gene 4112 4654 . - . ID=GCA008085315_00006_gene;locus_tag=GCA008085315_00006 contig_1 Pyrodigal CDS 4112 4654 . - 0 ID=GCA008085315_00006;Name=NAD(P)-binding domain-containing protein;locus_tag=GCA008085315_00006;product=NAD(P)-binding domain-containing protein;Parent=GCA008085315_00006_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00000B8007,UniRef:UniRef100_O05384,UniRef:UniRef50_O66263,UniRef:UniRef90_O66263 contig_1 Pyrodigal gene 4679 5473 . - . ID=GCA008085315_00007_gene;locus_tag=GCA008085315_00007 contig_1 Pyrodigal CDS 4679 5473 . - 0 ID=GCA008085315_00007;Name=TIGR01619 family protein;locus_tag=GCA008085315_00007;product=TIGR01619 family protein;Parent=GCA008085315_00007_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148333939.1,SO:0001217,UniParc:UPI0011D331E4,UniRef:UniRef100_UPI0011D331E4,UniRef:UniRef50_E6KX72,UniRef:UniRef90_G4A6X0 contig_1 Pyrodigal gene 5473 6276 . - . ID=GCA008085315_00008_gene;locus_tag=GCA008085315_00008;gene=xthA contig_1 Pyrodigal CDS 5473 6276 . - 0 ID=GCA008085315_00008;Name=exodeoxyribonuclease III;locus_tag=GCA008085315_00008;product=exodeoxyribonuclease III;Dbxref=GO:0003677,GO:0004519,GO:0006281,GO:0008311;gene=xthA;Parent=GCA008085315_00008_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0708,COG:L,KEGG:K01142,RefSeq:WP_005574053.1,SO:0001217,UniParc:UPI00000B7372,UniRef:UniRef100_O66261,UniRef:UniRef50_P09030,UniRef:UniRef90_A0A5D0EM19;ec_number=3.1.11.2 contig_1 Pyrodigal gene 6818 8236 . - . ID=GCA008085315_00009_gene;locus_tag=GCA008085315_00009;gene=wcaJ contig_1 Pyrodigal CDS 6818 8236 . - 0 ID=GCA008085315_00009;Name=Galactosyltransferase;locus_tag=GCA008085315_00009;product=Galactosyltransferase;gene=wcaJ;Parent=GCA008085315_00009_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2148,COG:M,KEGG:K16566,RefSeq:WP_005574051.1,SO:0001217,UniParc:UPI0001B9F853,UniRef:UniRef100_UPI0001B9F853,UniRef:UniRef50_A0A1R4LLG9,UniRef:UniRef90_S4W649 contig_1 Pyrodigal gene 8199 9155 . - . ID=GCA008085315_00010_gene;locus_tag=GCA008085315_00010;gene=bcsA contig_1 Pyrodigal CDS 8199 9155 . - 0 ID=GCA008085315_00010;Name=Rhamnosyltransferase;locus_tag=GCA008085315_00010;product=Rhamnosyltransferase;gene=bcsA;Parent=GCA008085315_00010_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1215,COG:N,RefSeq:WP_148320579.1,SO:0001217,UniParc:UPI0011D3DE52,UniRef:UniRef100_UPI0011D3DE52,UniRef:UniRef50_Q54129,UniRef:UniRef90_O05380 contig_1 Pyrodigal gene 9165 10037 . - . ID=GCA008085315_00011_gene;locus_tag=GCA008085315_00011;gene=wcaA contig_1 Pyrodigal CDS 9165 10037 . - 0 ID=GCA008085315_00011;Name=Glycosyltransferase;locus_tag=GCA008085315_00011;product=Glycosyltransferase;gene=wcaA;Parent=GCA008085315_00011_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0463,COG:M,RefSeq:WP_005547835.1,SO:0001217,UniParc:UPI00000B93DE,UniRef:UniRef100_O66258,UniRef:UniRef50_O66258,UniRef:UniRef90_O66258 contig_1 Pyrodigal gene 10095 11129 . - . ID=GCA008085315_00012_gene;locus_tag=GCA008085315_00012 contig_1 Pyrodigal CDS 10095 11129 . - 0 ID=GCA008085315_00012;Name=Integral membrane acetyltransferase;locus_tag=GCA008085315_00012;product=Integral membrane acetyltransferase;Parent=GCA008085315_00012_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K16568,RefSeq:WP_019518218.1,SO:0001217,UniParc:UPI00037319F1,UniRef:UniRef100_UPI00037319F1,UniRef:UniRef50_R9WM90,UniRef:UniRef90_O66257 contig_1 Pyrodigal gene 11133 11945 . - . ID=GCA008085315_00013_gene;locus_tag=GCA008085315_00013;gene=tll contig_1 Pyrodigal CDS 11133 11945 . - 0 ID=GCA008085315_00013;Name=dTDP-6-deoxy-L-talose 4-dehydrogenase (NAD(+));locus_tag=GCA008085315_00013;product=dTDP-6-deoxy-L-talose 4-dehydrogenase (NAD(+));Dbxref=GO:0009243,GO:0016491;gene=tll;Parent=GCA008085315_00013_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005574044.1,SO:0001217,UniParc:UPI00000AEB1E,UniRef:UniRef100_O66256,UniRef:UniRef50_O66256,UniRef:UniRef90_O66256;ec_number=1.1.1.339 contig_1 Pyrodigal gene 11950 13848 . - . ID=GCA008085315_00014_gene;locus_tag=GCA008085315_00014 contig_1 Pyrodigal CDS 11950 13848 . - 0 ID=GCA008085315_00014;Name=Rhamnan synthesis protein F;locus_tag=GCA008085315_00014;product=Rhamnan synthesis protein F;Parent=GCA008085315_00014_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005547263.1,SO:0001217,UniParc:UPI00000B675E,UniRef:UniRef100_O66255,UniRef:UniRef50_O66255,UniRef:UniRef90_O66255 contig_1 Pyrodigal gene 13856 14599 . - . ID=GCA008085315_00015_gene;locus_tag=GCA008085315_00015 contig_1 Pyrodigal CDS 13856 14599 . - 0 ID=GCA008085315_00015;Name=ABC transporter;locus_tag=GCA008085315_00015;product=ABC transporter;Parent=GCA008085315_00015_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005574042.1,SO:0001217,UniParc:UPI00000B7630,UniRef:UniRef100_O66254,UniRef:UniRef50_W0Q7F9,UniRef:UniRef90_O66254 contig_1 Pyrodigal gene 14605 15390 . - . ID=GCA008085315_00016_gene;locus_tag=GCA008085315_00016 contig_1 Pyrodigal CDS 14605 15390 . - 0 ID=GCA008085315_00016;Name=Transport permease protein;locus_tag=GCA008085315_00016;product=Transport permease protein;Parent=GCA008085315_00016_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005588546.1,SO:0001217,UniParc:UPI00000B8685,UniRef:UniRef100_O66253,UniRef:UniRef50_N2BMK2,UniRef:UniRef90_O66253 contig_1 Pyrodigal gene 15402 15944 . - . ID=GCA008085315_00017_gene;locus_tag=GCA008085315_00017;gene=rfbC contig_1 Pyrodigal CDS 15402 15944 . - 0 ID=GCA008085315_00017;Name=dTDP-4-dehydrorhamnose 3%2C5-epimerase;locus_tag=GCA008085315_00017;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;Dbxref=GO:0008830,GO:0019305;gene=rfbC;Parent=GCA008085315_00017_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1898,COG:M,RefSeq:WP_005547272.1,SO:0001217,UniParc:UPI0000039F15,UniRef:UniRef100_O66252,UniRef:UniRef50_Q9HU21,UniRef:UniRef90_I2NF19;ec_number=5.1.3.13 contig_1 Pyrodigal gene 15947 16831 . - . ID=GCA008085315_00018_gene;locus_tag=GCA008085315_00018;gene=rfbD contig_1 Pyrodigal CDS 15947 16831 . - 0 ID=GCA008085315_00018;Name=dTDP-4-dehydrorhamnose reductase;locus_tag=GCA008085315_00018;product=dTDP-4-dehydrorhamnose reductase;Dbxref=GO:0005829,GO:0008831,GO:0009243,GO:0019305,GO:0045226,GO:0046872;gene=rfbD;Parent=GCA008085315_00018_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00067,RefSeq:WP_005574038.1,SO:0001217,UniParc:UPI00000BAF9E,UniRef:UniRef100_O66251,UniRef:UniRef50_O66251,UniRef:UniRef90_O66251;ec_number=1.1.1.133 contig_1 Pyrodigal gene 16833 17705 . - . ID=GCA008085315_00019_gene;locus_tag=GCA008085315_00019;gene=rfbA contig_1 Pyrodigal CDS 16833 17705 . - 0 ID=GCA008085315_00019;Name=glucose-1-phosphate thymidylyltransferase RfbA;locus_tag=GCA008085315_00019;product=glucose-1-phosphate thymidylyltransferase RfbA;Dbxref=GO:0000271,GO:0008879,GO:0019305;gene=rfbA;Parent=GCA008085315_00019_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1209,COG:M,KEGG:K00973,RefSeq:WP_148333940.1,SO:0001217,UniParc:UPI0011D78786,UniRef:UniRef100_UPI0011D78786,UniRef:UniRef50_P55257,UniRef:UniRef90_Q9JRR4;ec_number=2.7.7.24 contig_1 Pyrodigal gene 17783 18850 . - . ID=GCA008085315_00020_gene;locus_tag=GCA008085315_00020;gene=rffG contig_1 Pyrodigal CDS 17783 18850 . - 0 ID=GCA008085315_00020;Name=dTDP-glucose 4%2C6-dehydratase;locus_tag=GCA008085315_00020;product=dTDP-glucose 4%2C6-dehydratase;Dbxref=GO:0008460,GO:0009225;gene=rffG;Parent=GCA008085315_00020_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1088,COG:M,RefSeq:WP_005547278.1,SO:0001217,UniParc:UPI00000BD796,UniRef:UniRef100_O66249,UniRef:UniRef50_P27830,UniRef:UniRef90_R9WN10;ec_number=4.2.1.46 contig_1 Pyrodigal gene 18921 20051 . - . ID=GCA008085315_00021_gene;locus_tag=GCA008085315_00021;gene=mltB contig_1 Pyrodigal CDS 18921 20051 . - 0 ID=GCA008085315_00021;Name=Transglycosylase SLT domain-containing protein;locus_tag=GCA008085315_00021;product=Transglycosylase SLT domain-containing protein;gene=mltB;Parent=GCA008085315_00021_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2951,COG:M,RefSeq:WP_005547280.1,SO:0001217,UniParc:UPI0001B9F8A4,UniRef:UniRef100_UPI0001B9F8A4,UniRef:UniRef50_A0A377JEU3,UniRef:UniRef90_O66248 contig_1 Pyrodigal gene 20053 20862 . - . ID=GCA008085315_00022_gene;locus_tag=GCA008085315_00022;gene=wcaA contig_1 Pyrodigal CDS 20053 20862 . - 0 ID=GCA008085315_00022;Name=Putative UDP-galactose--lipooligosaccharide galactosyltransferase;locus_tag=GCA008085315_00022;product=Putative UDP-galactose--lipooligosaccharide galactosyltransferase;gene=wcaA;Parent=GCA008085315_00022_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0463,COG:M,SO:0001217,UniRef:UniRef50_A0A378Q8K9,UniRef:UniRef90_A0A377JET1 contig_1 Pyrodigal gene 20931 21812 . - . ID=GCA008085315_00023_gene;locus_tag=GCA008085315_00023;gene=wcaA contig_1 Pyrodigal CDS 20931 21812 . - 0 ID=GCA008085315_00023;Name=Putative glycosyltransferase;locus_tag=GCA008085315_00023;product=Putative glycosyltransferase;gene=wcaA;Parent=GCA008085315_00023_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0463,COG:M,RefSeq:WP_148320581.1,SO:0001217,UniParc:UPI0011D8F50D,UniRef:UniRef100_UPI0011D8F50D,UniRef:UniRef50_Q48214,UniRef:UniRef90_Q9RHL9 contig_1 Pyrodigal gene 21812 23005 . - . ID=GCA008085315_00024_gene;locus_tag=GCA008085315_00024 contig_1 Pyrodigal CDS 21812 23005 . - 0 ID=GCA008085315_00024;Name=Serotype b-specific antigen synthesis gene cluster;locus_tag=GCA008085315_00024;product=Serotype b-specific antigen synthesis gene cluster;Parent=GCA008085315_00024_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005547286.1,SO:0001217,UniParc:UPI00000B4B1A,UniRef:UniRef100_O66245,UniRef:UniRef50_K0G9P0,UniRef:UniRef90_A0A5D0EL98 contig_1 Pyrodigal gene 23014 23784 . - . ID=GCA008085315_00025_gene;locus_tag=GCA008085315_00025 contig_1 Pyrodigal CDS 23014 23784 . - 0 ID=GCA008085315_00025;Name=Glycosyltransferase family 25 protein;locus_tag=GCA008085315_00025;product=Glycosyltransferase family 25 protein;Parent=GCA008085315_00025_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3306,COG:M,SO:0001217,UniParc:UPI00000B4D22,UniRef:UniRef100_O66244,UniRef:UniRef50_P71398,UniRef:UniRef90_O66244 contig_1 Pyrodigal gene 23921 25462 . + . ID=GCA008085315_00026_gene;locus_tag=GCA008085315_00026;gene=rfbX contig_1 Pyrodigal CDS 23921 25462 . + 0 ID=GCA008085315_00026;Name=Polysaccharide biosynthesis protein;locus_tag=GCA008085315_00026;product=Polysaccharide biosynthesis protein;gene=rfbX;Parent=GCA008085315_00026_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2244,COG:M,RefSeq:WP_148333941.1,SO:0001217,UniParc:UPI0011D360BE,UniRef:UniRef100_UPI0011D360BE,UniRef:UniRef50_A0A0B7H575,UniRef:UniRef90_A0A5D0EKK3 contig_1 Pyrodigal gene 25459 26415 . + . ID=GCA008085315_00027_gene;locus_tag=GCA008085315_00027;gene=epsI contig_1 Pyrodigal CDS 25459 26415 . + 0 ID=GCA008085315_00027;Name=Polysaccharide pyruvyl transferase;locus_tag=GCA008085315_00027;product=Polysaccharide pyruvyl transferase;gene=epsI;Parent=GCA008085315_00027_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5039,COG:GM,RefSeq:WP_005588535.1,SO:0001217,UniParc:UPI0001B9F8A8,UniRef:UniRef100_UPI0001B9F8A8,UniRef:UniRef50_A0A336N1A8,UniRef:UniRef90_A0A5D0EKP4 contig_1 Pyrodigal gene 26524 26775 . + . ID=GCA008085315_00028_gene;locus_tag=GCA008085315_00028;gene=stbD contig_1 Pyrodigal CDS 26524 26775 . + 0 ID=GCA008085315_00028;Name=Antitoxin;locus_tag=GCA008085315_00028;product=Antitoxin;gene=stbD;Parent=GCA008085315_00028_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2161,COG:V,KEGG:K19159,RefSeq:WP_005547296.1,SO:0001217,UniParc:UPI00005977FA,UniRef:UniRef100_S4WAK5,UniRef:UniRef50_D3VB02,UniRef:UniRef90_S4WAK5 contig_1 Pyrodigal gene 26772 27026 . + . ID=GCA008085315_00029_gene;locus_tag=GCA008085315_00029 contig_1 Pyrodigal CDS 26772 27026 . + 0 ID=GCA008085315_00029;Name=Txe/YoeB family addiction module toxin;locus_tag=GCA008085315_00029;product=Txe/YoeB family addiction module toxin;Dbxref=GO:0008219;Parent=GCA008085315_00029_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4115,COG:V,RefSeq:WP_005547298.1,SO:0001217,UniParc:UPI0001B9F8A9,UniRef:UniRef100_UPI0001B9F8A9,UniRef:UniRef50_Q9Z4V8,UniRef:UniRef90_A0A5D0ELP0 contig_1 Pyrodigal gene 27039 27782 . + . ID=GCA008085315_00030_gene;locus_tag=GCA008085315_00030;gene=elyC contig_1 Pyrodigal CDS 27039 27782 . + 0 ID=GCA008085315_00030;Name=Molybdate ABC transporter permease;locus_tag=GCA008085315_00030;product=Molybdate ABC transporter permease;gene=elyC;Parent=GCA008085315_00030_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1434,COG:M,RefSeq:WP_005542222.1,SO:0001217,UniParc:UPI0001B9F8AA,UniRef:UniRef100_S4W509,UniRef:UniRef50_K0FX72,UniRef:UniRef90_S4W509 contig_1 Pyrodigal gene 28076 28786 . + . ID=GCA008085315_00031_gene;locus_tag=GCA008085315_00031 contig_1 Pyrodigal CDS 28076 28786 . + 0 ID=GCA008085315_00031;Name=DNA ligase;locus_tag=GCA008085315_00031;product=DNA ligase;Dbxref=GO:0003910,GO:0005524,GO:0006281,GO:0006310;Parent=GCA008085315_00031_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K26441,SO:0001217,UniRef:UniRef50_P44121,UniRef:UniRef90_UPI00197C13C3;ec_number=6.5.1.1 contig_1 Infernal gene 28793 28890 . - . ID=GCA008085315_00032_gene;locus_tag=GCA008085315_00032;gene=AaHKsRNA22 contig_1 Infernal ncRNA 28793 28890 1.9e-11 - . ID=GCA008085315_00032;Name=Aggregatibacter sRNA 22;locus_tag=GCA008085315_00032;product=Aggregatibacter sRNA 22;Dbxref=RFAM:RF02902;Parent=GCA008085315_00032_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02902 contig_1 Pyrodigal gene 28919 31093 . - . ID=GCA008085315_00033_gene;locus_tag=GCA008085315_00033;gene=uvrD contig_1 Pyrodigal CDS 28919 31093 . - 0 ID=GCA008085315_00033;Name=DNA helicase II;locus_tag=GCA008085315_00033;product=DNA helicase II;Dbxref=GO:0003678,GO:0005737,GO:0006268,GO:0006281;gene=uvrD;Parent=GCA008085315_00033_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0210,COG:L,RefSeq:WP_005547302.1,SO:0001217,UniParc:UPI0001B9F8AD,UniRef:UniRef100_UPI0001B9F8AD,UniRef:UniRef50_Q02322,UniRef:UniRef90_E6KY27;ec_number=3.6.4.12 contig_1 Pyrodigal gene 31261 32610 . - . ID=GCA008085315_00034_gene;locus_tag=GCA008085315_00034;gene=gntT contig_1 Pyrodigal CDS 31261 32610 . - 0 ID=GCA008085315_00034;Name=Inner membrane permease ygbN;locus_tag=GCA008085315_00034;product=Inner membrane permease ygbN;gene=gntT;Parent=GCA008085315_00034_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2610,COG:G,RefSeq:WP_005547304.1,SO:0001217,UniParc:UPI0001B9F8AE,UniRef:UniRef100_UPI0001B9F8AE,UniRef:UniRef50_V2UPP9,UniRef:UniRef90_A0A3S4RIP7 contig_1 Pyrodigal gene 32828 33346 . + . ID=GCA008085315_00035_gene;locus_tag=GCA008085315_00035;gene=gntK contig_1 Pyrodigal CDS 32828 33346 . + 0 ID=GCA008085315_00035;Name=Gluconokinase;locus_tag=GCA008085315_00035;product=Gluconokinase;gene=gntK;Parent=GCA008085315_00035_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3265,COG:G,RefSeq:WP_005547305.1,SO:0001217,UniParc:UPI0001B9F8AF,UniRef:UniRef100_UPI0001B9F8AF,UniRef:UniRef50_Q6D649,UniRef:UniRef90_A0A5D0EL90 contig_1 Pyrodigal gene 33416 34414 . - . ID=GCA008085315_00036_gene;locus_tag=GCA008085315_00036;gene=gntR contig_1 Pyrodigal CDS 33416 34414 . - 0 ID=GCA008085315_00036;Name=gluconate operon transcriptional repressor GntR;locus_tag=GCA008085315_00036;product=gluconate operon transcriptional repressor GntR;Dbxref=GO:0003677,GO:0003700,GO:0006355;gene=gntR;Parent=GCA008085315_00036_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1609,COG:K,KEGG:K06145,RefSeq:WP_005547307.1,SO:0001217,UniParc:UPI0001B9F8B1,UniRef:UniRef100_UPI0001B9F8B1,UniRef:UniRef50_P0ACP5,UniRef:UniRef90_A0A5D0EKP2 contig_1 Pyrodigal gene 34463 35287 . - . ID=GCA008085315_00037_gene;locus_tag=GCA008085315_00037;gene=fdhD contig_1 Pyrodigal CDS 34463 35287 . - 0 ID=GCA008085315_00037;Name=formate dehydrogenase accessory sulfurtransferase FdhD;locus_tag=GCA008085315_00037;product=formate dehydrogenase accessory sulfurtransferase FdhD;Dbxref=GO:0009061,GO:0009326,GO:0015942,GO:0016783;gene=fdhD;Parent=GCA008085315_00037_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1526,KEGG:K02379,RefSeq:WP_005588526.1,SO:0001217,UniParc:UPI0002ACB957,UniRef:UniRef100_UPI0002ACB957,UniRef:UniRef50_P32177,UniRef:UniRef90_A0A5D0EKJ3 contig_1 Pyrodigal gene 35363 35542 . + . ID=GCA008085315_00038_gene;locus_tag=GCA008085315_00038 contig_1 Pyrodigal CDS 35363 35542 . + 0 ID=GCA008085315_00038;Name=hypothetical protein;locus_tag=GCA008085315_00038;product=hypothetical protein;Parent=GCA008085315_00038_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A5D0EKN4,UniRef:UniRef90_A0A5D0EKN4 contig_1 Pyrodigal gene 35529 35747 . + . ID=GCA008085315_00039_gene;locus_tag=GCA008085315_00039 contig_1 Pyrodigal CDS 35529 35747 . + 0 ID=GCA008085315_00039;Name=Formate dehydrogenase%2C nitrate-inducible%2C major subunit;locus_tag=GCA008085315_00039;product=Formate dehydrogenase%2C nitrate-inducible%2C major subunit;Parent=GCA008085315_00039_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A376LP86 contig_1 Infernal regulatory_region 36136 36194 3.1e-12 + . ID=FFLMJBKAJI_94;Name=Selenocysteine insertion sequence 3;product=Selenocysteine insertion sequence 3;Dbxref=RFAM:RF01989;inference=profile:Rfam:RF01989;Note=SO:1001268;regulatory_class=recoding_stimulatory_region contig_1 Pyrodigal gene 36190 37683 . + . ID=GCA008085315_00040_gene;locus_tag=GCA008085315_00040 contig_1 Pyrodigal CDS 36190 37683 . + 0 ID=GCA008085315_00040;Name=Formate dehydrogenase-O%2C major subunit%2C selenocysteine-containing;locus_tag=GCA008085315_00040;product=Formate dehydrogenase-O%2C major subunit%2C selenocysteine-containing;Parent=GCA008085315_00040_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A377XJL5 contig_1 Pyrodigal gene 38228 40513 . - . ID=GCA008085315_00041_gene;locus_tag=GCA008085315_00041;gene=hypF contig_1 Pyrodigal CDS 38228 40513 . - 0 ID=GCA008085315_00041;Name=carbamoyltransferase HypF;locus_tag=GCA008085315_00041;product=carbamoyltransferase HypF;Dbxref=GO:0003998,GO:0016743,GO:0036211,GO:0046872;gene=hypF;Parent=GCA008085315_00041_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0068,COG:O,KEGG:K04656,RefSeq:WP_012821076.1,SO:0001217,UniParc:UPI0001B9F8B9,UniRef:UniRef100_UPI0001B9F8B9,UniRef:UniRef50_P30131,UniRef:UniRef90_A0A5D0EM12;ec_number=6.1.2.- contig_1 Pyrodigal gene 40809 41408 . + . ID=GCA008085315_00042_gene;locus_tag=GCA008085315_00042;gene=hycB contig_1 Pyrodigal CDS 40809 41408 . + 0 ID=GCA008085315_00042;Name=Formate hydrogenlyase subunit 2 (Fhl subunit 2) (Hydrogenase-3 component b);locus_tag=GCA008085315_00042;product=Formate hydrogenlyase subunit 2 (Fhl subunit 2) (Hydrogenase-3 component b);gene=hycB;Parent=GCA008085315_00042_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1142,KEGG:K12136,RefSeq:WP_005547326.1,SO:0001217,UniParc:UPI0001B9F8BA,UniRef:UniRef100_UPI0001B9F8BA,UniRef:UniRef50_A0A0E1NG84,UniRef:UniRef90_A0A448Q4V4;ec_number=1.-.-.- contig_1 Pyrodigal gene 41441 43462 . + . ID=GCA008085315_00043_gene;locus_tag=GCA008085315_00043;gene=hyfB contig_1 Pyrodigal CDS 41441 43462 . + 0 ID=GCA008085315_00043;Name=hydrogenase 4 subunit B;locus_tag=GCA008085315_00043;product=hydrogenase 4 subunit B;Dbxref=GO:0008137,GO:0042773;gene=hyfB;Parent=GCA008085315_00043_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0651,COG:CP,RefSeq:WP_148320589.1,SO:0001217,UniParc:UPI0011D9FAD4,UniRef:UniRef100_UPI0011D9FAD4,UniRef:UniRef50_P23482,UniRef:UniRef90_F0EU49 contig_1 Pyrodigal gene 43473 44435 . + . ID=GCA008085315_00044_gene;locus_tag=GCA008085315_00044;gene=hyfC contig_1 Pyrodigal CDS 43473 44435 . + 0 ID=GCA008085315_00044;Name=Hydrogenase-4 component C;locus_tag=GCA008085315_00044;product=Hydrogenase-4 component C;gene=hyfC;Parent=GCA008085315_00044_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0650,KEGG:K12138,RefSeq:WP_005547331.1,SO:0001217,UniParc:UPI0001B9F8BD,UniRef:UniRef100_UPI0001B9F8BD,UniRef:UniRef50_P77858,UniRef:UniRef90_A0A336N3A9;ec_number=1.-.-.- contig_1 Pyrodigal gene 44448 45893 . + . ID=GCA008085315_00045_gene;locus_tag=GCA008085315_00045;gene=nuoL contig_1 Pyrodigal CDS 44448 45893 . + 0 ID=GCA008085315_00045;Name=hydrogenase 4 subunit D;locus_tag=GCA008085315_00045;product=hydrogenase 4 subunit D;Dbxref=GO:0008137;gene=nuoL;Parent=GCA008085315_00045_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1009,RefSeq:WP_005547332.1,SO:0001217,UniParc:UPI0001B9F8BE,UniRef:UniRef100_UPI0001B9F8BE,UniRef:UniRef50_P77416,UniRef:UniRef90_F0EU47 contig_1 Pyrodigal gene 45904 46542 . + . ID=GCA008085315_00046_gene;locus_tag=GCA008085315_00046;gene=hyfE contig_1 Pyrodigal CDS 45904 46542 . + 0 ID=GCA008085315_00046;Name=hydrogenase 4 membrane subunit;locus_tag=GCA008085315_00046;product=hydrogenase 4 membrane subunit;gene=hyfE;Parent=GCA008085315_00046_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG4237,KEGG:K12140,RefSeq:WP_148333942.1,SO:0001217,UniParc:UPI0011DBB4A2,UniRef:UniRef100_UPI0011DBB4A2,UniRef:UniRef50_P0AEW1,UniRef:UniRef90_A0A0K1N5C3;ec_number=1.-.-.- contig_1 Pyrodigal gene 46547 48085 . + . ID=GCA008085315_00047_gene;locus_tag=GCA008085315_00047;gene=hyfB contig_1 Pyrodigal CDS 46547 48085 . + 0 ID=GCA008085315_00047;Name=hydrogenase 4 subunit F;locus_tag=GCA008085315_00047;product=hydrogenase 4 subunit F;gene=hyfB;Parent=GCA008085315_00047_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0651,COG:CP,RefSeq:WP_005574001.1,SO:0001217,UniParc:UPI0001B9F8C0,UniRef:UniRef100_UPI0001B9F8C0,UniRef:UniRef50_P77437,UniRef:UniRef90_F0EU45 contig_1 Pyrodigal gene 48105 49835 . + . ID=GCA008085315_00048_gene;locus_tag=GCA008085315_00048;gene=hycE1 contig_1 Pyrodigal CDS 48105 49835 . + 0 ID=GCA008085315_00048;Name=Respiratory-chain NADH dehydrogenase%2C 30 Kd subunit;locus_tag=GCA008085315_00048;product=Respiratory-chain NADH dehydrogenase%2C 30 Kd subunit;gene=hycE1;Parent=GCA008085315_00048_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG3262,KEGG:K12142,RefSeq:WP_148320591.1,SO:0001217,UniParc:UPI0011D68A5C,UniRef:UniRef100_UPI0011D68A5C,UniRef:UniRef50_P77329,UniRef:UniRef90_F0EU44;ec_number=1.-.-.- contig_1 Pyrodigal gene 49849 50496 . + . ID=GCA008085315_00049_gene;locus_tag=GCA008085315_00049;gene=nuoI contig_1 Pyrodigal CDS 49849 50496 . + 0 ID=GCA008085315_00049;Name=4Fe-4S binding domain protein;locus_tag=GCA008085315_00049;product=4Fe-4S binding domain protein;gene=nuoI;Parent=GCA008085315_00049_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1143,RefSeq:WP_005547343.1,SO:0001217,UniParc:UPI0001B9F10D,UniRef:UniRef100_UPI0001B9F10D,UniRef:UniRef50_A0A377IWN1,UniRef:UniRef90_F0EU43 contig_1 Pyrodigal gene 50493 51269 . + . ID=GCA008085315_00050_gene;locus_tag=GCA008085315_00050;gene=hycG contig_1 Pyrodigal CDS 50493 51269 . + 0 ID=GCA008085315_00050;Name=Hydrogenase;locus_tag=GCA008085315_00050;product=Hydrogenase;gene=hycG;Parent=GCA008085315_00050_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG3260,RefSeq:WP_005547344.1,SO:0001217,UniParc:UPI0001B9F10E,UniRef:UniRef100_UPI0001B9F10E,UniRef:UniRef50_P16433,UniRef:UniRef90_A0A0M3G9R4 contig_1 Pyrodigal gene 51404 51808 . + . ID=GCA008085315_00051_gene;locus_tag=GCA008085315_00051;gene=hycH contig_1 Pyrodigal CDS 51404 51808 . + 0 ID=GCA008085315_00051;Name=Formate hydrogenlyase maturation protein HycH;locus_tag=GCA008085315_00051;product=Formate hydrogenlyase maturation protein HycH;gene=hycH;Parent=GCA008085315_00051_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005547345.1,SO:0001217,UniParc:UPI0001B9F10F,UniRef:UniRef100_UPI0001B9F10F,UniRef:UniRef50_C9PPV4,UniRef:UniRef90_A0A142G2E9 contig_1 Pyrodigal gene 51837 52259 . + . ID=GCA008085315_00052_gene;locus_tag=GCA008085315_00052;gene=hycI contig_1 Pyrodigal CDS 51837 52259 . + 0 ID=GCA008085315_00052;Name=hydrogenase maturation peptidase HycI;locus_tag=GCA008085315_00052;product=hydrogenase maturation peptidase HycI;Dbxref=GO:0004190,GO:0036211;gene=hycI;Parent=GCA008085315_00052_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0680,KEGG:K08315,SO:0001217,UniRef:UniRef50_A0A198G7T1,UniRef:UniRef90_A0A142G2E8;ec_number=3.4.23.51 contig_1 Pyrodigal gene 52851 53276 . + . ID=GCA008085315_00053_gene;locus_tag=GCA008085315_00053 contig_1 Pyrodigal CDS 52851 53276 . + 0 ID=GCA008085315_00053;Name=Molybdopterin oxidoreductase Fe4S4 domain protein;locus_tag=GCA008085315_00053;product=Molybdopterin oxidoreductase Fe4S4 domain protein;Parent=GCA008085315_00053_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A919HMR4,UniRef:UniRef90_C9PPV6 contig_1 Pyrodigal gene 53325 55010 . + . ID=GCA008085315_00054_gene;locus_tag=GCA008085315_00054;gene=fdhF contig_1 Pyrodigal CDS 53325 55010 . + 0 ID=GCA008085315_00054;Name=formate dehydrogenase subunit alpha;locus_tag=GCA008085315_00054;product=formate dehydrogenase subunit alpha;Dbxref=GO:0008863,GO:0009326,GO:0015942;gene=fdhF;Parent=GCA008085315_00054_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A2X3KNL3,UniRef:UniRef90_A0A380U104;ec_number=1.17.1.9 contig_1 Pyrodigal gene 55181 56053 . - . ID=GCA008085315_00055_gene;locus_tag=GCA008085315_00055;gene=sucD contig_1 Pyrodigal CDS 55181 56053 . - 0 ID=GCA008085315_00055;Name=succinate--CoA ligase subunit alpha;locus_tag=GCA008085315_00055;product=succinate--CoA ligase subunit alpha;Dbxref=GO:0003824;gene=sucD;Parent=GCA008085315_00055_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0074,RefSeq:WP_148320593.1,SO:0001217,UniParc:UPI0011D9A9FD,UniRef:UniRef100_UPI0011D9A9FD,UniRef:UniRef50_Q58643,UniRef:UniRef90_A0A248ZZL3;ec_number=6.2.1.5 contig_1 Pyrodigal gene 56064 57233 . - . ID=GCA008085315_00056_gene;locus_tag=GCA008085315_00056;gene=sucC contig_1 Pyrodigal CDS 56064 57233 . - 0 ID=GCA008085315_00056;Name=ADP-forming succinate--CoA ligase subunit beta;locus_tag=GCA008085315_00056;product=ADP-forming succinate--CoA ligase subunit beta;Dbxref=GO:0003824,GO:0005524,GO:0006099,GO:0046872;gene=sucC;Parent=GCA008085315_00056_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0045,RefSeq:WP_005547356.1,SO:0001217,UniParc:UPI0001B9F114,UniRef:UniRef100_UPI0001B9F114,UniRef:UniRef50_Q8UC60,UniRef:UniRef90_G4A9C2;ec_number=6.2.1.5 contig_1 Pyrodigal gene 57420 58643 . - . ID=GCA008085315_00057_gene;locus_tag=GCA008085315_00057;gene=odhB contig_1 Pyrodigal CDS 57420 58643 . - 0 ID=GCA008085315_00057;Name=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;locus_tag=GCA008085315_00057;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;Dbxref=GO:0004149,GO:0006099,GO:0045252;gene=odhB;Parent=GCA008085315_00057_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0508,RefSeq:WP_005547357.1,SO:0001217,UniParc:UPI0001B9F116,UniRef:UniRef100_UPI0001B9F116,UniRef:UniRef50_Q83BU7,UniRef:UniRef90_A0A142G2D9;ec_number=2.3.1.61 contig_1 Pyrodigal gene 58769 61576 . - . ID=GCA008085315_00058_gene;locus_tag=GCA008085315_00058;gene=sucA contig_1 Pyrodigal CDS 58769 61576 . - 0 ID=GCA008085315_00058;Name=2-oxoglutarate dehydrogenase E1 component;locus_tag=GCA008085315_00058;product=2-oxoglutarate dehydrogenase E1 component;Dbxref=GO:0004591,GO:0006099,GO:0030976,GO:0045252;gene=sucA;Parent=GCA008085315_00058_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0567,RefSeq:WP_005573992.1,SO:0001217,UniParc:UPI0001B9F117,UniRef:UniRef100_UPI0001B9F117,UniRef:UniRef50_P45303,UniRef:UniRef90_A0A5D0EYL9;ec_number=1.2.4.2 contig_1 Pyrodigal gene 61855 62493 . - . ID=GCA008085315_00059_gene;locus_tag=GCA008085315_00059 contig_1 Pyrodigal CDS 61855 62493 . - 0 ID=GCA008085315_00059;Name=Carboxy-protease;locus_tag=GCA008085315_00059;product=Carboxy-protease;Parent=GCA008085315_00059_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005573990.1,SO:0001217,UniParc:UPI0001B9F119,UniRef:UniRef100_UPI0001B9F119,UniRef:UniRef50_Q57544,UniRef:UniRef90_G4A9B9 contig_1 Pyrodigal gene 62570 63130 . - . ID=GCA008085315_00060_gene;locus_tag=GCA008085315_00060;gene=ycbK contig_1 Pyrodigal CDS 62570 63130 . - 0 ID=GCA008085315_00060;Name=DUF882 domain-containing protein;locus_tag=GCA008085315_00060;product=DUF882 domain-containing protein;gene=ycbK;Parent=GCA008085315_00060_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3108,COG:S,RefSeq:WP_005547363.1,SO:0001217,UniParc:UPI00022AC267,UniRef:UniRef100_UPI00022AC267,UniRef:UniRef50_E8KJ35,UniRef:UniRef90_A0A0K1N3S8 contig_1 Pyrodigal gene 63195 64703 . - . ID=GCA008085315_00061_gene;locus_tag=GCA008085315_00061;gene=ycbB contig_1 Pyrodigal CDS 63195 64703 . - 0 ID=GCA008085315_00061;Name=L%2CD-transpeptidase;locus_tag=GCA008085315_00061;product=L%2CD-transpeptidase;gene=ycbB;Parent=GCA008085315_00061_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2989,COG:M,RefSeq:WP_148320595.1,SO:0001217,UniParc:UPI0011D84CFF,UniRef:UniRef100_UPI0011D84CFF,UniRef:UniRef50_Q9CP00,UniRef:UniRef90_A0A142G2D6 contig_1 Pyrodigal gene 64781 66838 . - . ID=GCA008085315_00062_gene;locus_tag=GCA008085315_00062;gene=prc contig_1 Pyrodigal CDS 64781 66838 . - 0 ID=GCA008085315_00062;Name=carboxy terminal-processing peptidase;locus_tag=GCA008085315_00062;product=carboxy terminal-processing peptidase;Dbxref=GO:0005515,GO:0006508,GO:0008236;gene=prc;Parent=GCA008085315_00062_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0793,COG:O,RefSeq:WP_148333943.1,SO:0001217,UniParc:UPI0011D785C3,UniRef:UniRef100_UPI0011D785C3,UniRef:UniRef50_P45306,UniRef:UniRef90_A0A142G2D5;ec_number=3.4.21.102 contig_1 Pyrodigal gene 66912 67520 . - . ID=GCA008085315_00063_gene;locus_tag=GCA008085315_00063;gene=proQ contig_1 Pyrodigal CDS 66912 67520 . - 0 ID=GCA008085315_00063;Name=RNA chaperone ProQ;locus_tag=GCA008085315_00063;product=RNA chaperone ProQ;Dbxref=GO:0003723,GO:0010608,GO:0033592,GO:0034057;gene=proQ;Parent=GCA008085315_00063_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3109,COG:T,KEGG:K03607,RefSeq:WP_005547369.1,SO:0001217,UniParc:UPI0001B9F11D,UniRef:UniRef100_UPI0001B9F11D,UniRef:UniRef50_P44286,UniRef:UniRef90_A0A142G2D4 contig_1 Pyrodigal gene 67738 69021 . + . ID=GCA008085315_00064_gene;locus_tag=GCA008085315_00064;gene=pqiA contig_1 Pyrodigal CDS 67738 69021 . + 0 ID=GCA008085315_00064;Name=PqiA family integral membrane protein;locus_tag=GCA008085315_00064;product=PqiA family integral membrane protein;gene=pqiA;Parent=GCA008085315_00064_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2995,COG:M,KEGG:K03808,RefSeq:WP_005567234.1,SO:0001217,UniParc:UPI00022ADE94,UniRef:UniRef100_UPI00022ADE94,UniRef:UniRef50_P44287,UniRef:UniRef90_G4A9B4 contig_1 Pyrodigal gene 68984 71641 . + . ID=GCA008085315_00065_gene;locus_tag=GCA008085315_00065;gene=pqiB contig_1 Pyrodigal CDS 68984 71641 . + 0 ID=GCA008085315_00065;Name=MCE family protein;locus_tag=GCA008085315_00065;product=MCE family protein;gene=pqiB;Parent=GCA008085315_00065_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3008,COG:M,KEGG:K06192,RefSeq:WP_005547372.1,SO:0001217,UniParc:UPI0001B9F11F,UniRef:UniRef100_UPI0001B9F11F,UniRef:UniRef50_P44288,UniRef:UniRef90_A0A142G2D2 contig_1 Pyrodigal gene 71717 72961 . - . ID=GCA008085315_00066_gene;locus_tag=GCA008085315_00066;gene=pepT contig_1 Pyrodigal CDS 71717 72961 . - 0 ID=GCA008085315_00066;Name=peptidase T;locus_tag=GCA008085315_00066;product=peptidase T;Dbxref=GO:0006508,GO:0008270,GO:0045148;gene=pepT;Parent=GCA008085315_00066_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2195,COG:E,KEGG:K01258,RefSeq:WP_005547374.1,SO:0001217,UniParc:UPI0001B9F120,UniRef:UniRef100_UPI0001B9F120,UniRef:UniRef50_Q0TV42,UniRef:UniRef90_A0A5D0EL40;ec_number=3.4.11.4 contig_1 Pyrodigal gene 73225 74343 . + . ID=GCA008085315_00067_gene;locus_tag=GCA008085315_00067;gene=potA contig_1 Pyrodigal CDS 73225 74343 . + 0 ID=GCA008085315_00067;Name=spermidine/putrescine ABC transporter ATP-binding protein PotA;locus_tag=GCA008085315_00067;product=spermidine/putrescine ABC transporter ATP-binding protein PotA;Dbxref=GO:0005524,GO:0015594,GO:0015846,GO:0016020,GO:0016887,GO:0022857,GO:0043190;gene=potA;Parent=GCA008085315_00067_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3842,COG:E,RefSeq:WP_005567231.1,SO:0001217,UniParc:UPI00022AC902,UniRef:UniRef100_UPI00022AC902,UniRef:UniRef50_P69874,UniRef:UniRef90_P45171;ec_number=7.6.2.11 contig_1 Pyrodigal gene 74327 75187 . + . ID=GCA008085315_00068_gene;locus_tag=GCA008085315_00068;gene=potB contig_1 Pyrodigal CDS 74327 75187 . + 0 ID=GCA008085315_00068;Name=spermidine/putrescine ABC transporter permease PotB;locus_tag=GCA008085315_00068;product=spermidine/putrescine ABC transporter permease PotB;Dbxref=GO:0005886,GO:0016020,GO:0055085;gene=potB;Parent=GCA008085315_00068_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1176,COG:E,RefSeq:WP_148320597.1,SO:0001217,UniParc:UPI0011D4CAE3,UniRef:UniRef100_UPI0011D4CAE3,UniRef:UniRef50_P0AFK4,UniRef:UniRef90_P45170;ec_number=7.6.2.- contig_1 Pyrodigal gene 75187 75960 . + . ID=GCA008085315_00069_gene;locus_tag=GCA008085315_00069;gene=potC contig_1 Pyrodigal CDS 75187 75960 . + 0 ID=GCA008085315_00069;Name=spermidine/putrescine ABC transporter permease PotC;locus_tag=GCA008085315_00069;product=spermidine/putrescine ABC transporter permease PotC;Dbxref=GO:0005886,GO:0055085;gene=potC;Parent=GCA008085315_00069_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1177,COG:E,RefSeq:WP_148320599.1,SO:0001217,UniParc:UPI0011D8600C,UniRef:UniRef100_UPI0011D8600C,UniRef:UniRef50_P0AFK6,UniRef:UniRef90_P45169;ec_number=7.6.2.- contig_1 Pyrodigal gene 76091 77188 . + . ID=GCA008085315_00070_gene;locus_tag=GCA008085315_00070;gene=potD contig_1 Pyrodigal CDS 76091 77188 . + 0 ID=GCA008085315_00070;Name=Putrescine-binding periplasmic protein;locus_tag=GCA008085315_00070;product=Putrescine-binding periplasmic protein;gene=potD;Parent=GCA008085315_00070_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0687,COG:E,RefSeq:WP_005573972.1,SO:0001217,UniParc:UPI0001B9F124,UniRef:UniRef100_UPI0001B9F124,UniRef:UniRef50_P45168,UniRef:UniRef90_G4A9A8 contig_1 Pyrodigal gene 77310 78206 . + . ID=GCA008085315_00071_gene;locus_tag=GCA008085315_00071;gene=cdd contig_1 Pyrodigal CDS 77310 78206 . + 0 ID=GCA008085315_00071;Name=cytidine deaminase;locus_tag=GCA008085315_00071;product=cytidine deaminase;Dbxref=GO:0004126,GO:0008270,GO:0009972;gene=cdd;Parent=GCA008085315_00071_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0295,COG:F,KEGG:K01489,RefSeq:WP_005547383.1,SO:0001217,UniParc:UPI00022ADE91,UniRef:UniRef100_UPI00022ADE91,UniRef:UniRef50_Q9CP11,UniRef:UniRef90_A0A142G2C6;ec_number=3.5.4.5 contig_1 Pyrodigal gene 78285 79601 . - . ID=GCA008085315_00072_gene;locus_tag=GCA008085315_00072;gene=serS contig_1 Pyrodigal CDS 78285 79601 . - 0 ID=GCA008085315_00072;Name=serine--tRNA ligase;locus_tag=GCA008085315_00072;product=serine--tRNA ligase;Dbxref=GO:0000166,GO:0004828,GO:0005524,GO:0006434;gene=serS;Parent=GCA008085315_00072_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0172,COG:J,KEGG:K01875,RefSeq:WP_005573970.1,SO:0001217,UniParc:UPI00022AE3E5,UniRef:UniRef100_UPI00022AE3E5,UniRef:UniRef50_A4YV70,UniRef:UniRef90_A0A142G2C5;ec_number=6.1.1.11 contig_1 Pyrodigal gene 79909 81576 . + . ID=GCA008085315_00073_gene;locus_tag=GCA008085315_00073;gene=dcuA contig_1 Pyrodigal CDS 79909 81576 . + 0 ID=GCA008085315_00073;Name=Transporter%2C anaerobic C4-dicarboxylate uptake (Dcu) family;locus_tag=GCA008085315_00073;product=Transporter%2C anaerobic C4-dicarboxylate uptake (Dcu) family;gene=dcuA;Parent=GCA008085315_00073_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2704,COG:G,RefSeq:WP_005545716.1,SO:0001217,UniParc:UPI0001B9F128,UniRef:UniRef100_UPI0001B9F128,UniRef:UniRef50_P0ABN9,UniRef:UniRef90_F0ERS3 contig_1 Infernal gene 81976 82056 . + . ID=GCA008085315_00074_gene;locus_tag=GCA008085315_00074;gene=AaHKsRNA22 contig_1 Infernal ncRNA 81976 82056 1.7e-05 + . ID=GCA008085315_00074;Name=Aggregatibacter sRNA 22;locus_tag=GCA008085315_00074;product=Aggregatibacter sRNA 22;Dbxref=RFAM:RF02902;Parent=GCA008085315_00074_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02902 contig_1 Pyrodigal gene 82073 83413 . - . ID=GCA008085315_00075_gene;locus_tag=GCA008085315_00075;gene=rarA contig_1 Pyrodigal CDS 82073 83413 . - 0 ID=GCA008085315_00075;Name=Replication-associated recombination protein A;locus_tag=GCA008085315_00075;product=Replication-associated recombination protein A;gene=rarA;Parent=GCA008085315_00075_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2256,COG:L,RefSeq:WP_148320601.1,SO:0001217,UniParc:UPI0011D86771,UniRef:UniRef100_UPI0011D86771,UniRef:UniRef50_A0A0P7DUV3,UniRef:UniRef90_E6KWN9 contig_1 Pyrodigal gene 83426 84043 . - . ID=GCA008085315_00076_gene;locus_tag=GCA008085315_00076;gene=lolA contig_1 Pyrodigal CDS 83426 84043 . - 0 ID=GCA008085315_00076;Name=outer membrane lipoprotein chaperone LolA;locus_tag=GCA008085315_00076;product=outer membrane lipoprotein chaperone LolA;Dbxref=GO:0042597,GO:0042953;gene=lolA;Parent=GCA008085315_00076_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2834,COG:M,KEGG:K03634,RefSeq:WP_005540265.1,SO:0001217,UniParc:UPI0001B9F12A,UniRef:UniRef100_A0A5D0L052,UniRef:UniRef50_P45263,UniRef:UniRef90_A0A5D0L052 contig_1 Pyrodigal gene 84136 86880 . - . ID=GCA008085315_00077_gene;locus_tag=GCA008085315_00077;gene=ftsK contig_1 Pyrodigal CDS 84136 86880 . - 0 ID=GCA008085315_00077;Name=DNA translocase FtsK;locus_tag=GCA008085315_00077;product=DNA translocase FtsK;gene=ftsK;Parent=GCA008085315_00077_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1674,COG:D,RefSeq:WP_005568319.1,SO:0001217,UniParc:UPI0001B9F12B,UniRef:UniRef100_UPI0001B9F12B,UniRef:UniRef50_Q9CP13,UniRef:UniRef90_A0A5D0EKI8 contig_1 Pyrodigal gene 86884 87363 . - . ID=GCA008085315_00078_gene;locus_tag=GCA008085315_00078;gene=lrp contig_1 Pyrodigal CDS 86884 87363 . - 0 ID=GCA008085315_00078;Name=leucine-responsive transcriptional regulator Lrp;locus_tag=GCA008085315_00078;product=leucine-responsive transcriptional regulator Lrp;Dbxref=GO:0005829,GO:0006524,GO:0043201,GO:0043565;gene=lrp;Parent=GCA008085315_00078_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1522,COG:K,RefSeq:WP_005540269.1,SO:0001217,UniParc:UPI0001B9F12C,UniRef:UniRef100_A0A142G2C0,UniRef:UniRef50_P45265,UniRef:UniRef90_P45265 contig_1 Pyrodigal gene 87902 89275 . - . ID=GCA008085315_00079_gene;locus_tag=GCA008085315_00079;gene=radA contig_1 Pyrodigal CDS 87902 89275 . - 0 ID=GCA008085315_00079;Name=DNA repair protein RadA;locus_tag=GCA008085315_00079;product=DNA repair protein RadA;Dbxref=GO:0000725,GO:0003684,GO:0005524,GO:0006281,GO:0016887,GO:0046872,GO:0140664;gene=radA;Parent=GCA008085315_00079_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1066,COG:L,RefSeq:WP_005545693.1,SO:0001217,UniParc:UPI00022AE3E0,UniRef:UniRef100_UPI00022AE3E0,UniRef:UniRef50_P24554,UniRef:UniRef90_P45266;ec_number=3.6.4.- contig_1 Pyrodigal gene 89278 90432 . - . ID=GCA008085315_00080_gene;locus_tag=GCA008085315_00080;gene=pPPi contig_1 Pyrodigal CDS 89278 90432 . - 0 ID=GCA008085315_00080;Name=Adenylate cyclase;locus_tag=GCA008085315_00080;product=Adenylate cyclase;gene=pPPi;Parent=GCA008085315_00080_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3025,COG:P,KEGG:K18446,RefSeq:WP_005545691.1,SO:0001217,UniParc:UPI00022AE3DF,UniRef:UniRef100_UPI00022AE3DF,UniRef:UniRef50_E6KWN3,UniRef:UniRef90_A0A5D0EP62;ec_number=3.6.1.25 contig_1 Infernal gene 89655 89755 . + . ID=GCA008085315_00081_gene;locus_tag=GCA008085315_00081;gene=AaHKsRNA22 contig_1 Infernal ncRNA 89655 89755 2.2e-14 + . ID=GCA008085315_00081;Name=Aggregatibacter sRNA 22;locus_tag=GCA008085315_00081;product=Aggregatibacter sRNA 22;Dbxref=RFAM:RF02902;Parent=GCA008085315_00081_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02902 contig_1 Pyrodigal gene 90597 91277 . + . ID=GCA008085315_00082_gene;locus_tag=GCA008085315_00082;gene=ykaA contig_1 Pyrodigal CDS 90597 91277 . + 0 ID=GCA008085315_00082;Name=Phosphate transport regulator;locus_tag=GCA008085315_00082;product=Phosphate transport regulator;gene=ykaA;Parent=GCA008085315_00082_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1392,COG:P,RefSeq:WP_005539264.1,SO:0001217,UniParc:UPI0001B9F17F,UniRef:UniRef100_A0A5D0L0G8,UniRef:UniRef50_A6VN97,UniRef:UniRef90_A0A5D0L0G8 contig_1 Pyrodigal gene 91303 92568 . + . ID=GCA008085315_00083_gene;locus_tag=GCA008085315_00083;gene=pitA contig_1 Pyrodigal CDS 91303 92568 . + 0 ID=GCA008085315_00083;Name=Phosphate transporter;locus_tag=GCA008085315_00083;product=Phosphate transporter;gene=pitA;Parent=GCA008085315_00083_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0306,COG:P,RefSeq:WP_005539270.1,SO:0001217,UniParc:UPI0001CA78E5,UniRef:UniRef100_A0A5D0EPD6,UniRef:UniRef50_P45268,UniRef:UniRef90_A0A5D0EPD6 contig_1 Pyrodigal gene 92637 93248 . + . ID=GCA008085315_00084_gene;locus_tag=GCA008085315_00084;gene=ygiM contig_1 Pyrodigal CDS 92637 93248 . + 0 ID=GCA008085315_00084;Name=TIGR04211 family SH3 domain-containing protein;locus_tag=GCA008085315_00084;product=TIGR04211 family SH3 domain-containing protein;gene=ygiM;Parent=GCA008085315_00084_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3103,COG:R,RefSeq:WP_005545687.1,SO:0001217,UniParc:UPI0001B9F181,UniRef:UniRef100_UPI0001B9F181,UniRef:UniRef50_P44272,UniRef:UniRef90_A0A5D0EP81 contig_1 Pyrodigal gene 93248 94552 . + . ID=GCA008085315_00085_gene;locus_tag=GCA008085315_00085;gene=pcnB contig_1 Pyrodigal CDS 93248 94552 . + 0 ID=GCA008085315_00085;Name=multifunctional CCA addition/repair protein;locus_tag=GCA008085315_00085;product=multifunctional CCA addition/repair protein;Dbxref=GO:0001680,GO:0003723,GO:0004810,GO:0005524;gene=pcnB;Parent=GCA008085315_00085_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0617,COG:J,RefSeq:WP_012821087.1,SO:0001217,UniParc:UPI0001B9F182,UniRef:UniRef100_UPI0001B9F182,UniRef:UniRef50_Q5ZRX9,UniRef:UniRef90_A0A5D0EP59;ec_number=3.1.4.- contig_1 Pyrodigal gene 94587 95210 . + . ID=GCA008085315_00086_gene;locus_tag=GCA008085315_00086;gene=lolB contig_1 Pyrodigal CDS 94587 95210 . + 0 ID=GCA008085315_00086;Name=lipoprotein insertase outer membrane protein LolB;locus_tag=GCA008085315_00086;product=lipoprotein insertase outer membrane protein LolB;Dbxref=GO:0009279,GO:0015031,GO:0044874;gene=lolB;Parent=GCA008085315_00086_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3017,COG:M,KEGG:K02494,RefSeq:WP_005567581.1,SO:0001217,UniParc:UPI00022ADEB0,UniRef:UniRef100_UPI00022ADEB0,UniRef:UniRef50_P45270,UniRef:UniRef90_O52727 contig_1 Pyrodigal gene 95210 96121 . + . ID=GCA008085315_00087_gene;locus_tag=GCA008085315_00087;gene=ispE contig_1 Pyrodigal CDS 95210 96121 . + 0 ID=GCA008085315_00087;Name=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;locus_tag=GCA008085315_00087;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;Dbxref=GO:0016114,GO:0050515;gene=ispE;Parent=GCA008085315_00087_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1947,COG:I,KEGG:K00919,RefSeq:WP_148320603.1,SO:0001217,UniParc:UPI0011D6378E,UniRef:UniRef100_UPI0011D6378E,UniRef:UniRef50_Q8EAR0,UniRef:UniRef90_A0A142G390;ec_number=2.7.1.148 contig_1 Pyrodigal gene 96162 97112 . + . ID=GCA008085315_00088_gene;locus_tag=GCA008085315_00088;gene=prs contig_1 Pyrodigal CDS 96162 97112 . + 0 ID=GCA008085315_00088;Name=Ribose-phosphate pyrophosphokinase;locus_tag=GCA008085315_00088;product=Ribose-phosphate pyrophosphokinase;Dbxref=GO:0000287,GO:0002189,GO:0004749,GO:0005524,GO:0005737,GO:0006015,GO:0006164,GO:0009156,GO:0016301;gene=prs;Parent=GCA008085315_00088_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0462,COG:F,KEGG:K00948,RefSeq:WP_005540120.1,SO:0001217,UniParc:UPI0001CA7943,UniRef:UniRef100_A0A142FYA4,UniRef:UniRef50_Q63XL8,UniRef:UniRef90_P44328;ec_number=2.7.6.1 contig_1 Pyrodigal gene 97289 97435 . + . ID=GCA008085315_00089_gene;locus_tag=GCA008085315_00089 contig_1 Pyrodigal CDS 97289 97435 . + 0 ID=GCA008085315_00089;Name=Lipoprotein%2C putative;locus_tag=GCA008085315_00089;product=Lipoprotein%2C putative;Parent=GCA008085315_00089_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_P44125,UniRef:UniRef90_G4A990 contig_1 Pyrodigal gene 97741 98886 . + . ID=GCA008085315_00090_gene;locus_tag=GCA008085315_00090;gene=lldD contig_1 Pyrodigal CDS 97741 98886 . + 0 ID=GCA008085315_00090;Name=FMN-dependent L-lactate dehydrogenase LldD;locus_tag=GCA008085315_00090;product=FMN-dependent L-lactate dehydrogenase LldD;Dbxref=GO:0004457,GO:0006089,GO:0010181;gene=lldD;Parent=GCA008085315_00090_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CIR,COG:COG1304,RefSeq:WP_005545672.1,SO:0001217,UniParc:UPI0001B9F187,UniRef:UniRef100_UPI0001B9F187,UniRef:UniRef50_P33232,UniRef:UniRef90_A0A142FYA5 contig_1 Pyrodigal gene 99129 100718 . + . ID=GCA008085315_00091_gene;locus_tag=GCA008085315_00091;gene=lldP contig_1 Pyrodigal CDS 99129 100718 . + 0 ID=GCA008085315_00091;Name=L-lactate permease;locus_tag=GCA008085315_00091;product=L-lactate permease;gene=lldP;Parent=GCA008085315_00091_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1620,KEGG:K03303,RefSeq:WP_005540114.1,SO:0001217,UniParc:UPI0001B9F188,UniRef:UniRef100_A0A142FYA6,UniRef:UniRef50_Q57251,UniRef:UniRef90_A0A142FYA6 contig_1 Pyrodigal gene 100873 101205 . - . ID=GCA008085315_00092_gene;locus_tag=GCA008085315_00092;gene=yeeX contig_1 Pyrodigal CDS 100873 101205 . - 0 ID=GCA008085315_00092;Name=DUF496 domain-containing protein;locus_tag=GCA008085315_00092;product=DUF496 domain-containing protein;gene=yeeX;Parent=GCA008085315_00092_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2926,COG:S,KEGG:K09802,RefSeq:WP_005540112.1,SO:0001217,UniParc:UPI0001B9F18A,UniRef:UniRef100_A0A5D0L2H1,UniRef:UniRef50_P44117,UniRef:UniRef90_A0A5D0L2H1 contig_1 Pyrodigal gene 101405 102487 . + . ID=GCA008085315_00093_gene;locus_tag=GCA008085315_00093;gene=serC contig_1 Pyrodigal CDS 101405 102487 . + 0 ID=GCA008085315_00093;Name=3-phosphoserine/phosphohydroxythreonine transaminase;locus_tag=GCA008085315_00093;product=3-phosphoserine/phosphohydroxythreonine transaminase;Dbxref=GO:0003824,GO:0004648,GO:0006564;gene=serC;Parent=GCA008085315_00093_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1932,COG:HE,KEGG:K00831,RefSeq:WP_005567583.1,SO:0001217,UniParc:UPI0001B9F18C,UniRef:UniRef100_A0A5D0EP72,UniRef:UniRef50_P23721,UniRef:UniRef90_A0A5D0EP72;ec_number=2.6.1.52 contig_1 Pyrodigal gene 102562 103659 . + . ID=GCA008085315_00094_gene;locus_tag=GCA008085315_00094;gene=hisC contig_1 Pyrodigal CDS 102562 103659 . + 0 ID=GCA008085315_00094;Name=histidinol-phosphate transaminase;locus_tag=GCA008085315_00094;product=histidinol-phosphate transaminase;Dbxref=GO:0000105,GO:0004400;gene=hisC;Parent=GCA008085315_00094_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0079,COG:E,KEGG:K00817,RefSeq:WP_005573948.1,SO:0001217,UniParc:UPI00022AD0D1,UniRef:UniRef100_UPI00022AD0D1,UniRef:UniRef50_Q65S79,UniRef:UniRef90_A0A5D0EPE3;ec_number=2.6.1.9 contig_1 Pyrodigal gene 103670 105001 . + . ID=GCA008085315_00095_gene;locus_tag=GCA008085315_00095;gene=aroA contig_1 Pyrodigal CDS 103670 105001 . + 0 ID=GCA008085315_00095;Name=3-phosphoshikimate 1-carboxyvinyltransferase;locus_tag=GCA008085315_00095;product=3-phosphoshikimate 1-carboxyvinyltransferase;Dbxref=GO:0003866,GO:0009073;gene=aroA;Parent=GCA008085315_00095_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0128,COG:E,RefSeq:WP_148320607.1,SO:0001217,UniParc:UPI0011D95894,UniRef:UniRef100_UPI0011D95894,UniRef:UniRef50_P0A6D3,UniRef:UniRef90_A0A5D0EP71;ec_number=2.5.1.19 contig_1 Pyrodigal gene 105080 105547 . - . ID=GCA008085315_00096_gene;locus_tag=GCA008085315_00096;gene=rnhA contig_1 Pyrodigal CDS 105080 105547 . - 0 ID=GCA008085315_00096;Name=ribonuclease HI;locus_tag=GCA008085315_00096;product=ribonuclease HI;Dbxref=GO:0003676,GO:0004523;gene=rnhA;Parent=GCA008085315_00096_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0328,COG:L,KEGG:K03469,RefSeq:WP_005545666.1,SO:0001217,UniParc:UPI0001B9F18F,UniRef:UniRef100_UPI0001B9F18F,UniRef:UniRef50_B0TRM1,UniRef:UniRef90_E6KYU4;ec_number=3.1.26.4 contig_1 Pyrodigal gene 105615 106376 . + . ID=GCA008085315_00097_gene;locus_tag=GCA008085315_00097;gene=dnaQ contig_1 Pyrodigal CDS 105615 106376 . + 0 ID=GCA008085315_00097;Name=DNA polymerase III subunit epsilon;locus_tag=GCA008085315_00097;product=DNA polymerase III subunit epsilon;Dbxref=GO:0003677,GO:0003887,GO:0006260;gene=dnaQ;Parent=GCA008085315_00097_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0847,COG:L,RefSeq:WP_005545665.1,SO:0001217,UniParc:UPI0001B9F190,UniRef:UniRef100_UPI0001B9F190,UniRef:UniRef50_P03007,UniRef:UniRef90_A0A142FYB5;ec_number=2.7.7.7 contig_1 tRNAscan-SE gene 106470 106546 . + . ID=GCA008085315_00098_gene;locus_tag=GCA008085315_00098;gene=trnD contig_1 tRNAscan-SE tRNA 106470 106546 . + . ID=GCA008085315_00098;Name=tRNA-Asp(gtc);locus_tag=GCA008085315_00098;product=tRNA-Asp(gtc);gene=trnD;anti_codon=gtc;amino_acid=Asp;Parent=GCA008085315_00098_gene;inference=profile:tRNAscan:2.0;Note=SO:0000256 contig_1 tRNAscan-SE gene 106569 106645 . + . ID=GCA008085315_00099_gene;locus_tag=GCA008085315_00099;gene=trnD contig_1 tRNAscan-SE tRNA 106569 106645 . + . ID=GCA008085315_00099;Name=tRNA-Asp(gtc);locus_tag=GCA008085315_00099;product=tRNA-Asp(gtc);gene=trnD;anti_codon=gtc;amino_acid=Asp;Parent=GCA008085315_00099_gene;inference=profile:tRNAscan:2.0;Note=SO:0000256 contig_1 Pyrodigal gene 106824 107078 . + . ID=GCA008085315_00100_gene;locus_tag=GCA008085315_00100;gene=stbD contig_1 Pyrodigal CDS 106824 107078 . + 0 ID=GCA008085315_00100;Name=Stability protein StbD;locus_tag=GCA008085315_00100;product=Stability protein StbD;gene=stbD;Parent=GCA008085315_00100_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005545663.1,SO:0001217,UniParc:UPI0001B9F191,UniRef:UniRef100_UPI0001B9F191,UniRef:UniRef50_A0A159Z7M2,UniRef:UniRef90_A0A5D0EPW1 contig_1 Pyrodigal gene 107068 107358 . + . ID=GCA008085315_00101_gene;locus_tag=GCA008085315_00101;gene=relE contig_1 Pyrodigal CDS 107068 107358 . + 0 ID=GCA008085315_00101;Name=Addiction module toxin RelE;locus_tag=GCA008085315_00101;product=Addiction module toxin RelE;gene=relE;Parent=GCA008085315_00101_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2026,COG:V,RefSeq:WP_005545660.1,SO:0001217,UniParc:UPI0001B9F192,UniRef:UniRef100_UPI0001B9F192,UniRef:UniRef50_A0A5E6SG07,UniRef:UniRef90_A0A142FYB7 contig_1 Pyrodigal gene 107416 107754 . - . ID=GCA008085315_00102_gene;locus_tag=GCA008085315_00102;gene=qdoI contig_1 Pyrodigal CDS 107416 107754 . - 0 ID=GCA008085315_00102;Name=Cupin;locus_tag=GCA008085315_00102;product=Cupin;gene=qdoI;Parent=GCA008085315_00102_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1917,COG:R,RefSeq:WP_012821089.1,SO:0001217,UniParc:UPI0001B9F193,UniRef:UniRef100_UPI0001B9F193,UniRef:UniRef50_R9MDL5,UniRef:UniRef90_A0A0K1N2F4 contig_1 Pyrodigal gene 107822 108298 . + . ID=GCA008085315_00103_gene;locus_tag=GCA008085315_00103 contig_1 Pyrodigal CDS 107822 108298 . + 0 ID=GCA008085315_00103;Name=hypothetical protein;locus_tag=GCA008085315_00103;product=hypothetical protein;Parent=GCA008085315_00103_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=PFAM:PF09039.17 contig_1 Pyrodigal gene 108868 109323 . + . ID=GCA008085315_00104_gene;locus_tag=GCA008085315_00104 contig_1 Pyrodigal CDS 108868 109323 . + 0 ID=GCA008085315_00104;Name=Lactate dehydrogenase A2-like protein;locus_tag=GCA008085315_00104;product=Lactate dehydrogenase A2-like protein;Parent=GCA008085315_00104_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005539929.1,SO:0001217,UniParc:UPI00022BFED4,UniRef:UniRef100_UPI00022BFED4,UniRef:UniRef50_G4A6K3,UniRef:UniRef90_G4A6K3 contig_1 Pyrodigal gene 109324 109530 . + . ID=GCA008085315_00105_gene;locus_tag=GCA008085315_00105;gene=copG contig_1 Pyrodigal CDS 109324 109530 . + 0 ID=GCA008085315_00105;Name=Ribbon-helix-helix protein CopG domain-containing protein;locus_tag=GCA008085315_00105;product=Ribbon-helix-helix protein CopG domain-containing protein;gene=copG;Parent=GCA008085315_00105_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005539927.1,SO:0001217,UniParc:UPI0001B9F668,UniRef:UniRef100_UPI0001B9F668,UniRef:UniRef50_G4A6K4,UniRef:UniRef90_G4A6K4 contig_1 Pyrodigal gene 109629 109856 . + . ID=GCA008085315_00106_gene;locus_tag=GCA008085315_00106 contig_1 Pyrodigal CDS 109629 109856 . + 0 ID=GCA008085315_00106;Name=hypothetical protein;locus_tag=GCA008085315_00106;product=hypothetical protein;Parent=GCA008085315_00106_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005539921.1,SO:0001217,UniParc:UPI00022AC114,UniRef:UniRef100_UPI0001B9F667,UniRef:UniRef50_G4A6K5,UniRef:UniRef90_UPI0001B9F667 contig_1 Pyrodigal gene 110496 110948 . + . ID=GCA008085315_00107_gene;locus_tag=GCA008085315_00107 contig_1 Pyrodigal CDS 110496 110948 . + 0 ID=GCA008085315_00107;Name=Ribosomal protein L11 methyltransferase;locus_tag=GCA008085315_00107;product=Ribosomal protein L11 methyltransferase;Parent=GCA008085315_00107_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005540084.1,SO:0001217,UniParc:UPI0001CA794F,UniRef:UniRef100_A0A5D0EP83,UniRef:UniRef50_A0A5D0EP83,UniRef:UniRef90_A0A5D0EP83 contig_1 Pyrodigal gene 111119 112507 . + . ID=GCA008085315_00108_gene;locus_tag=GCA008085315_00108;gene=yegQ contig_1 Pyrodigal CDS 111119 112507 . + 0 ID=GCA008085315_00108;Name=tRNA 5-hydroxyuridine modification protein YegQ;locus_tag=GCA008085315_00108;product=tRNA 5-hydroxyuridine modification protein YegQ;Dbxref=GO:0005829,GO:0006508,GO:0008033,GO:0008233;gene=yegQ;Parent=GCA008085315_00108_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0826,COG:J,KEGG:K08303,RefSeq:WP_148320613.1,SO:0001217,UniParc:UPI0011D70814,UniRef:UniRef100_UPI0011D70814,UniRef:UniRef50_P76403,UniRef:UniRef90_P44700;ec_number=3.4.-.- contig_1 Pyrodigal gene 112804 113895 . + . ID=GCA008085315_00109_gene;locus_tag=GCA008085315_00109;gene=queA contig_1 Pyrodigal CDS 112804 113895 . + 0 ID=GCA008085315_00109;Name=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;locus_tag=GCA008085315_00109;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;Dbxref=GO:0005737,GO:0006400,GO:0008616,GO:0051075;gene=queA;Parent=GCA008085315_00109_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0809,COG:J,KEGG:K07568,RefSeq:WP_005545654.1,SO:0001217,UniParc:UPI0001B9F196,UniRef:UniRef100_UPI0001B9F196,UniRef:UniRef50_P44595,UniRef:UniRef90_E6KYW1;ec_number=2.4.99.17 contig_1 Pyrodigal gene 113939 115075 . - . ID=GCA008085315_00110_gene;locus_tag=GCA008085315_00110;gene=hisC contig_1 Pyrodigal CDS 113939 115075 . - 0 ID=GCA008085315_00110;Name=Aminotransferase class I;locus_tag=GCA008085315_00110;product=Aminotransferase class I;gene=hisC;Parent=GCA008085315_00110_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0079,COG:E,RefSeq:WP_148320616.1,SO:0001217,UniParc:UPI0011D7BEAC,UniRef:UniRef100_UPI0011D7BEAC,UniRef:UniRef50_A0A0G4QAJ6,UniRef:UniRef90_A0A5D0EP93 contig_1 Pyrodigal gene 115548 116699 . + . ID=GCA008085315_00111_gene;locus_tag=GCA008085315_00111;gene=tgt contig_1 Pyrodigal CDS 115548 116699 . + 0 ID=GCA008085315_00111;Name=tRNA guanosine(34) transglycosylase Tgt;locus_tag=GCA008085315_00111;product=tRNA guanosine(34) transglycosylase Tgt;Dbxref=GO:0002099,GO:0005737,GO:0005829,GO:0006400,GO:0008479,GO:0008616,GO:0046872,GO:0101030;gene=tgt;Parent=GCA008085315_00111_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0343,COG:J,KEGG:K00773,RefSeq:WP_005545649.1,SO:0001217,UniParc:UPI0001B9F198,UniRef:UniRef100_UPI0001B9F198,UniRef:UniRef50_P44594,UniRef:UniRef90_A6VN75;ec_number=2.4.2.29 contig_1 Pyrodigal gene 116991 117290 . + . ID=GCA008085315_00112_gene;locus_tag=GCA008085315_00112;gene=yajC contig_1 Pyrodigal CDS 116991 117290 . + 0 ID=GCA008085315_00112;Name=preprotein translocase subunit YajC;locus_tag=GCA008085315_00112;product=preprotein translocase subunit YajC;Dbxref=GO:0005886,GO:0009306,GO:0015450;gene=yajC;Parent=GCA008085315_00112_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1862,COG:U,KEGG:K03210,RefSeq:WP_005540052.1,SO:0001217,UniParc:UPI0001B9F199,UniRef:UniRef100_A0A142FYD0,UniRef:UniRef50_A0A142FYD0,UniRef:UniRef90_A0A142FYD0 contig_1 Pyrodigal gene 117321 119171 . + . ID=GCA008085315_00113_gene;locus_tag=GCA008085315_00113;gene=secD contig_1 Pyrodigal CDS 117321 119171 . + 0 ID=GCA008085315_00113;Name=Protein translocase subunit SecD;locus_tag=GCA008085315_00113;product=Protein translocase subunit SecD;gene=secD;Parent=GCA008085315_00113_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0342,COG:U,RefSeq:WP_005545646.1,SO:0001217,UniParc:UPI0001B9F19A,UniRef:UniRef100_UPI0001B9F19A,UniRef:UniRef50_P0AG90,UniRef:UniRef90_E6KYW6 contig_1 Pyrodigal gene 119188 120153 . + . ID=GCA008085315_00114_gene;locus_tag=GCA008085315_00114;gene=secF contig_1 Pyrodigal CDS 119188 120153 . + 0 ID=GCA008085315_00114;Name=Protein-export membrane protein SecF;locus_tag=GCA008085315_00114;product=Protein-export membrane protein SecF;gene=secF;Parent=GCA008085315_00114_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0341,COG:U,RefSeq:WP_005545643.1,SO:0001217,UniParc:UPI0001B9F19B,UniRef:UniRef100_UPI0001B9F19B,UniRef:UniRef50_P44590,UniRef:UniRef90_A0A142G391 contig_1 Pyrodigal gene 120373 120501 . + . ID=GCA008085315_00115_gene;locus_tag=GCA008085315_00115 contig_1 Pyrodigal CDS 120373 120501 . + 0 ID=GCA008085315_00115;Name=hypothetical protein;locus_tag=GCA008085315_00115;product=hypothetical protein;Parent=GCA008085315_00115_gene;inference=ab initio prediction:Pyrodigal:3.5 contig_1 Pyrodigal gene 120467 122488 . + . ID=GCA008085315_00116_gene;locus_tag=GCA008085315_00116 contig_1 Pyrodigal CDS 120467 122488 . + 0 ID=GCA008085315_00116;Name=TonB-dependent receptor domain-containing protein;locus_tag=GCA008085315_00116;product=TonB-dependent receptor domain-containing protein;Parent=GCA008085315_00116_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_UPI0019D4BC71 contig_1 Pyrodigal gene 122838 125459 . + . ID=GCA008085315_00117_gene;locus_tag=GCA008085315_00117;gene=adhE contig_1 Pyrodigal CDS 122838 125459 . + 0 ID=GCA008085315_00117;Name=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;locus_tag=GCA008085315_00117;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;Dbxref=GO:0004022,GO:0006066,GO:0015976,GO:0016620,GO:0046872;gene=adhE;Parent=GCA008085315_00117_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1454,KEGG:K04072,RefSeq:WP_148320618.1,SO:0001217,UniParc:UPI0011DC4A92,UniRef:UniRef100_UPI0011DC4A92,UniRef:UniRef50_A0A0H2ZM56,UniRef:UniRef90_A0A5D0EP96;ec_number=1.2.1.10 contig_1 Pyrodigal gene 125542 126495 . - . ID=GCA008085315_00118_gene;locus_tag=GCA008085315_00118;gene=araH contig_1 Pyrodigal CDS 125542 126495 . - 0 ID=GCA008085315_00118;Name=D-ribose transporter subunit;locus_tag=GCA008085315_00118;product=D-ribose transporter subunit;gene=araH;Parent=GCA008085315_00118_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1172,COG:G,RefSeq:WP_005592122.1,SO:0001217,UniParc:UPI00022BFD29,UniRef:UniRef100_UPI00022BFD29,UniRef:UniRef50_A0A263HA33,UniRef:UniRef90_A0A377JH12 contig_1 Pyrodigal gene 126546 128051 . - . ID=GCA008085315_00119_gene;locus_tag=GCA008085315_00119;gene=mglA contig_1 Pyrodigal CDS 126546 128051 . - 0 ID=GCA008085315_00119;Name=Ribose/galactose/methyl galactoside import ATP-binding protein;locus_tag=GCA008085315_00119;product=Ribose/galactose/methyl galactoside import ATP-binding protein;gene=mglA;Parent=GCA008085315_00119_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1129,COG:G,RefSeq:WP_148320620.1,SO:0001217,UniParc:UPI0011D8054B,UniRef:UniRef100_UPI0011D8054B,UniRef:UniRef50_A0A5C6Q679,UniRef:UniRef90_G4A953 contig_1 Pyrodigal gene 128120 129052 . - . ID=GCA008085315_00120_gene;locus_tag=GCA008085315_00120;gene=rbsB contig_1 Pyrodigal CDS 128120 129052 . - 0 ID=GCA008085315_00120;Name=ATPase;locus_tag=GCA008085315_00120;product=ATPase;gene=rbsB;Parent=GCA008085315_00120_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1879,COG:G,RefSeq:WP_005570608.1,SO:0001217,UniParc:UPI00022ACC12,UniRef:UniRef100_UPI00022ACC12,UniRef:UniRef50_A0A1V4B455,UniRef:UniRef90_A0A142FYD6 contig_1 Pyrodigal gene 129136 130074 . - . ID=GCA008085315_00121_gene;locus_tag=GCA008085315_00121;gene=rbsB contig_1 Pyrodigal CDS 129136 130074 . - 0 ID=GCA008085315_00121;Name=D-ribose-binding periplasmic protein RbsB-1;locus_tag=GCA008085315_00121;product=D-ribose-binding periplasmic protein RbsB-1;gene=rbsB;Parent=GCA008085315_00121_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1879,COG:G,RefSeq:WP_148320622.1,SO:0001217,UniParc:UPI0011DACA00,UniRef:UniRef100_UPI0011DACA00,UniRef:UniRef50_A0A1V4B455,UniRef:UniRef90_A0A3S4W489 contig_1 Pyrodigal gene 130375 131514 . - . ID=GCA008085315_00122_gene;locus_tag=GCA008085315_00122;gene=mviM contig_1 Pyrodigal CDS 130375 131514 . - 0 ID=GCA008085315_00122;Name=Dehydrogenase;locus_tag=GCA008085315_00122;product=Dehydrogenase;gene=mviM;Parent=GCA008085315_00122_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0673,COG:R,RefSeq:WP_050846464.1,SO:0001217,UniParc:UPI000680C2F2,UniRef:UniRef100_UPI000680C2F2,UniRef:UniRef50_A0A0T9UCT7,UniRef:UniRef90_A0A377JGN7 contig_1 Pyrodigal gene 131605 133113 . - . ID=GCA008085315_00123_gene;locus_tag=GCA008085315_00123;gene=adhE contig_1 Pyrodigal CDS 131605 133113 . - 0 ID=GCA008085315_00123;Name=methylmalonate-semialdehyde dehydrogenase (CoA acylating);locus_tag=GCA008085315_00123;product=methylmalonate-semialdehyde dehydrogenase (CoA acylating);gene=adhE;Parent=GCA008085315_00123_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1012,COG:I,RefSeq:WP_014167930.1,SO:0001217,UniParc:UPI00022BFD71,UniRef:UniRef100_UPI00022BFD71,UniRef:UniRef50_A0A238KT63,UniRef:UniRef90_A0A5D0EPH4 contig_1 Pyrodigal gene 133351 134694 . - . ID=GCA008085315_00124_gene;locus_tag=GCA008085315_00124;gene=uhpC contig_1 Pyrodigal CDS 133351 134694 . - 0 ID=GCA008085315_00124;Name=Regulatory protein uhpC;locus_tag=GCA008085315_00124;product=Regulatory protein uhpC;gene=uhpC;Parent=GCA008085315_00124_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2271,COG:G,RefSeq:WP_148320625.1,SO:0001217,UniParc:UPI0011DC1DB7,UniRef:UniRef100_UPI0011DC1DB7,UniRef:UniRef50_A0A0H3GTT0,UniRef:UniRef90_A0A336N294 contig_1 Pyrodigal gene 134712 135515 . - . ID=GCA008085315_00125_gene;locus_tag=GCA008085315_00125;gene=suhB contig_1 Pyrodigal CDS 134712 135515 . - 0 ID=GCA008085315_00125;Name=Inositol-1-monophosphatase;locus_tag=GCA008085315_00125;product=Inositol-1-monophosphatase;gene=suhB;Parent=GCA008085315_00125_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0483,COG:G,KEGG:K01092,RefSeq:WP_014167932.1,SO:0001217,UniParc:UPI00022BFD73,UniRef:UniRef100_UPI00022BFD73,UniRef:UniRef50_A0A336N656,UniRef:UniRef90_A0A336N656;ec_number=3.1.3.25 contig_1 Pyrodigal gene 135779 136609 . + . ID=GCA008085315_00126_gene;locus_tag=GCA008085315_00126;gene=iolB contig_1 Pyrodigal CDS 135779 136609 . + 0 ID=GCA008085315_00126;Name=5-deoxy-glucuronate isomerase;locus_tag=GCA008085315_00126;product=5-deoxy-glucuronate isomerase;Dbxref=GO:0016861,GO:0019310;gene=iolB;Parent=GCA008085315_00126_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3718,COG:G,KEGG:K03337,RefSeq:WP_148320627.1,SO:0001217,UniParc:UPI0011D5C5E1,UniRef:UniRef100_UPI0011D5C5E1,UniRef:UniRef50_A0A3G2ID12,UniRef:UniRef90_A0A142FXU9;ec_number=5.3.1.30 contig_1 Pyrodigal gene 136738 137577 . + . ID=GCA008085315_00127_gene;locus_tag=GCA008085315_00127;gene=rpiR contig_1 Pyrodigal CDS 136738 137577 . + 0 ID=GCA008085315_00127;Name=putative HTH-type transcriptional regulator ybbH;locus_tag=GCA008085315_00127;product=putative HTH-type transcriptional regulator ybbH;gene=rpiR;Parent=GCA008085315_00127_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1737,COG:K,RefSeq:WP_025298511.1,SO:0001217,UniParc:UPI0003037470,UniRef:UniRef100_UPI0003037470,UniRef:UniRef50_R8AVM9,UniRef:UniRef90_A0A336N3X9 contig_1 Pyrodigal gene 137617 138249 . - . ID=GCA008085315_00128_gene;locus_tag=GCA008085315_00128 contig_1 Pyrodigal CDS 137617 138249 . - 0 ID=GCA008085315_00128;Name=5-keto-2-deoxygluconokinase;locus_tag=GCA008085315_00128;product=5-keto-2-deoxygluconokinase;Parent=GCA008085315_00128_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A377UTL9 contig_1 Pyrodigal gene 138242 139525 . - . ID=GCA008085315_00129_gene;locus_tag=GCA008085315_00129 contig_1 Pyrodigal CDS 138242 139525 . - 0 ID=GCA008085315_00129;Name=Putative carbohydrate kinase;locus_tag=GCA008085315_00129;product=Putative carbohydrate kinase;Parent=GCA008085315_00129_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A376DC08 contig_1 Pyrodigal gene 139835 141778 . + . ID=GCA008085315_00130_gene;locus_tag=GCA008085315_00130;gene=iolD contig_1 Pyrodigal CDS 139835 141778 . + 0 ID=GCA008085315_00130;Name=3D-(3%2C5/4)-trihydroxycyclohexane-1%2C2-dione acylhydrolase (decyclizing);locus_tag=GCA008085315_00130;product=3D-(3%2C5/4)-trihydroxycyclohexane-1%2C2-dione acylhydrolase (decyclizing);Dbxref=GO:0016823,GO:0019310,GO:0030976;gene=iolD;Parent=GCA008085315_00130_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3962,COG:G,RefSeq:WP_148320629.1,SO:0001217,UniParc:UPI0011D3A4E9,UniRef:UniRef100_UPI0011D3A4E9,UniRef:UniRef50_P42415,UniRef:UniRef90_A0A5D0EJN9;ec_number=3.7.1.22 contig_1 Pyrodigal gene 141833 142729 . + . ID=GCA008085315_00131_gene;locus_tag=GCA008085315_00131;gene=iolE contig_1 Pyrodigal CDS 141833 142729 . + 0 ID=GCA008085315_00131;Name=myo-inosose-2 dehydratase;locus_tag=GCA008085315_00131;product=myo-inosose-2 dehydratase;Dbxref=GO:0019310,GO:0050114;gene=iolE;Parent=GCA008085315_00131_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1082,COG:G,KEGG:K03335,RefSeq:WP_005553353.1,SO:0001217,UniParc:UPI00022ABA5B,UniRef:UniRef100_UPI00022ABA5B,UniRef:UniRef50_Q0TUZ0,UniRef:UniRef90_A0A377JIH5;ec_number=4.2.1.44 contig_1 Pyrodigal gene 142732 143742 . + . ID=GCA008085315_00132_gene;locus_tag=GCA008085315_00132;gene=iolG contig_1 Pyrodigal CDS 142732 143742 . + 0 ID=GCA008085315_00132;Name=inositol 2-dehydrogenase;locus_tag=GCA008085315_00132;product=inositol 2-dehydrogenase;Dbxref=GO:0019310,GO:0050112;gene=iolG;Parent=GCA008085315_00132_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0673,COG:R,RefSeq:WP_148320631.1,SO:0001217,UniParc:UPI0011D7CF86,UniRef:UniRef100_UPI0011D7CF86,UniRef:UniRef50_W2PCE0,UniRef:UniRef90_A0A379B5X1;ec_number=1.1.1.18 contig_1 Pyrodigal gene 143846 144358 . - . ID=GCA008085315_00133_gene;locus_tag=GCA008085315_00133;gene=mtlR contig_1 Pyrodigal CDS 143846 144358 . - 0 ID=GCA008085315_00133;Name=MltR family transcriptional regulator;locus_tag=GCA008085315_00133;product=MltR family transcriptional regulator;gene=mtlR;Parent=GCA008085315_00133_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3722,COG:K,KEGG:K02562,RefSeq:WP_005537910.1,SO:0001217,UniParc:UPI0001B9F1A1,UniRef:UniRef100_A0A5D0EJ37,UniRef:UniRef50_Q9CLY6,UniRef:UniRef90_A0A5D0EJ37 contig_1 Pyrodigal gene 144436 145584 . - . ID=GCA008085315_00134_gene;locus_tag=GCA008085315_00134;gene=mtlD contig_1 Pyrodigal CDS 144436 145584 . - 0 ID=GCA008085315_00134;Name=mannitol-1-phosphate 5-dehydrogenase;locus_tag=GCA008085315_00134;product=mannitol-1-phosphate 5-dehydrogenase;Dbxref=GO:0008926,GO:0019594;gene=mtlD;Parent=GCA008085315_00134_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0246,COG:G,KEGG:K00009,RefSeq:WP_005537916.1,SO:0001217,UniParc:UPI0001B9F1ED,UniRef:UniRef100_A0A142G273,UniRef:UniRef50_Q8Z9X0,UniRef:UniRef90_A0A142G273;ec_number=1.1.1.17 contig_1 Pyrodigal gene 145662 147542 . - . ID=GCA008085315_00135_gene;locus_tag=GCA008085315_00135;gene=mtlA2 contig_1 Pyrodigal CDS 145662 147542 . - 0 ID=GCA008085315_00135;Name=PTS system mannitol-specific EIICBA component;locus_tag=GCA008085315_00135;product=PTS system mannitol-specific EIICBA component;gene=mtlA2;Parent=GCA008085315_00135_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4668,COG:G,KEGG:K02800,RefSeq:WP_005545617.1,SO:0001217,UniParc:UPI0001B9F1EE,UniRef:UniRef100_UPI0001B9F1EE,UniRef:UniRef50_P00550,UniRef:UniRef90_A0A5D0EK93;ec_number=2.7.1.197 contig_1 Pyrodigal gene 147953 149386 . - . ID=GCA008085315_00136_gene;locus_tag=GCA008085315_00136;gene=ltxD contig_1 Pyrodigal CDS 147953 149386 . - 0 ID=GCA008085315_00136;Name=Leukotoxin export protein LtxD;locus_tag=GCA008085315_00136;product=Leukotoxin export protein LtxD;Dbxref=GO:0005886,GO:0009306;gene=ltxD;Parent=GCA008085315_00136_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1566,COG:V,RefSeq:WP_005545615.1,SO:0001217,UniParc:UPI0001B9F1EF,UniRef:UniRef100_A0A142G271,UniRef:UniRef50_P26761,UniRef:UniRef90_P18790 contig_1 Pyrodigal gene 149401 151524 . - . ID=GCA008085315_00137_gene;locus_tag=GCA008085315_00137;gene=ltxB contig_1 Pyrodigal CDS 149401 151524 . - 0 ID=GCA008085315_00137;Name=Leukotoxin export ATP-binding protein LtxB;locus_tag=GCA008085315_00137;product=Leukotoxin export ATP-binding protein LtxB;Dbxref=GO:0005524,GO:0005886,GO:0006508,GO:0008233,GO:0015440,GO:0015462,GO:0016887,GO:0030253,GO:0030256,GO:0034040;gene=ltxB;Parent=GCA008085315_00137_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2274,COG:V,RefSeq:WP_005588600.1,SO:0001217,UniParc:UPI0001B9F1F0,UniRef:UniRef100_UPI0001B9F1F0,UniRef:UniRef50_P23702,UniRef:UniRef90_P23702;ec_number=7.4.2.5 contig_1 Pyrodigal gene 151593 154760 . - . ID=GCA008085315_00138_gene;locus_tag=GCA008085315_00138;gene=ltxA contig_1 Pyrodigal CDS 151593 154760 . - 0 ID=GCA008085315_00138;Name=RTX family leukotoxin LtxA;locus_tag=GCA008085315_00138;product=RTX family leukotoxin LtxA;Dbxref=GO:0005509,GO:0005576,GO:0009279,GO:0015267,GO:0031640,GO:0090729;gene=ltxA;Parent=GCA008085315_00138_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_005567703,BlastRules:WP_005578814,COG:COG2931,COG:Q,KEGG:K01406,RefSeq:WP_005537925.1,SO:0001217,UniParc:UPI0001B9F1F1,UniRef:UniRef100_A0A142G269,UniRef:UniRef50_P16462,UniRef:UniRef90_P16462;ec_number=3.4.24.40 contig_1 Pyrodigal gene 154773 155279 . - . ID=GCA008085315_00139_gene;locus_tag=GCA008085315_00139;gene=ltxC contig_1 Pyrodigal CDS 154773 155279 . - 0 ID=GCA008085315_00139;Name=Leukotoxin-activating lysine-acyltransferase LtxC;locus_tag=GCA008085315_00139;product=Leukotoxin-activating lysine-acyltransferase LtxC;Dbxref=GO:0005737,GO:0009404,GO:0016746;gene=ltxC;Parent=GCA008085315_00139_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2994,COG:O,KEGG:K07389,RefSeq:WP_005545611.1,SO:0001217,UniParc:UPI000016E08B,UniRef:UniRef100_A0A142G268,UniRef:UniRef50_P16461,UniRef:UniRef90_P16461;ec_number=2.3.1.- contig_1 Pyrodigal gene 155617 156069 . - . ID=GCA008085315_00140_gene;locus_tag=GCA008085315_00140 contig_1 Pyrodigal CDS 155617 156069 . - 0 ID=GCA008085315_00140;Name=Serine hydroxymethyltransferase;locus_tag=GCA008085315_00140;product=Serine hydroxymethyltransferase;Parent=GCA008085315_00140_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005537927.1,SO:0001217,UniParc:UPI0000242166,UniRef:UniRef100_Q6XGZ7,UniRef:UniRef50_Q6XGZ7,UniRef:UniRef90_Q6XGZ7 contig_1 Pyrodigal gene 156386 157648 . - . ID=GCA008085315_00141_gene;locus_tag=GCA008085315_00141;gene=glyA contig_1 Pyrodigal CDS 156386 157648 . - 0 ID=GCA008085315_00141;Name=Serine hydroxymethyltransferase;locus_tag=GCA008085315_00141;product=Serine hydroxymethyltransferase;Dbxref=GO:0004372,GO:0005829,GO:0019264,GO:0030170,GO:0035999;gene=glyA;Parent=GCA008085315_00141_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0112,COG:E,KEGG:K00600,RefSeq:WP_005545609.1,SO:0001217,UniParc:UPI0001B9F1F2,UniRef:UniRef100_UPI0001B9F1F2,UniRef:UniRef50_P43844,UniRef:UniRef90_P57830;ec_number=2.1.2.1 contig_1 Pyrodigal gene 157783 158325 . - . ID=GCA008085315_00142_gene;locus_tag=GCA008085315_00142 contig_1 Pyrodigal CDS 157783 158325 . - 0 ID=GCA008085315_00142;Name=Lipoprotein;locus_tag=GCA008085315_00142;product=Lipoprotein;Parent=GCA008085315_00142_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005537932.1,SO:0001217,UniParc:UPI0001B9F1F3,UniRef:UniRef100_A0A142G265,UniRef:UniRef50_A0A142G265,UniRef:UniRef90_A0A142G265 contig_1 Pyrodigal gene 158942 159946 . - . ID=GCA008085315_00143_gene;locus_tag=GCA008085315_00143;gene=rsmC contig_1 Pyrodigal CDS 158942 159946 . - 0 ID=GCA008085315_00143;Name=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;locus_tag=GCA008085315_00143;product=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;Dbxref=GO:0003676,GO:0006364,GO:0008990;gene=rsmC;Parent=GCA008085315_00143_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2813,COG:J,RefSeq:WP_148320633.1,SO:0001217,UniParc:UPI0011D54A67,UniRef:UniRef100_UPI0011D54A67,UniRef:UniRef50_P44453,UniRef:UniRef90_A0A5D0EJL8;ec_number=2.1.1.172 contig_1 Pyrodigal gene 160014 160451 . + . ID=GCA008085315_00144_gene;locus_tag=GCA008085315_00144;gene=holD contig_1 Pyrodigal CDS 160014 160451 . + 0 ID=GCA008085315_00144;Name=DNA polymerase III subunit psi;locus_tag=GCA008085315_00144;product=DNA polymerase III subunit psi;gene=holD;Parent=GCA008085315_00144_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3050,COG:L,KEGG:K02344,RefSeq:WP_005564385.1,SO:0001217,UniParc:UPI00022ADA86,UniRef:UniRef100_UPI00022ADA86,UniRef:UniRef50_E6KYX3,UniRef:UniRef90_A0A5D0EK88;ec_number=2.7.7.7 contig_1 Pyrodigal gene 160461 160904 . + . ID=GCA008085315_00145_gene;locus_tag=GCA008085315_00145;gene=rimI contig_1 Pyrodigal CDS 160461 160904 . + 0 ID=GCA008085315_00145;Name=ribosomal protein S18-alanine N-acetyltransferase;locus_tag=GCA008085315_00145;product=ribosomal protein S18-alanine N-acetyltransferase;Dbxref=GO:0006474,GO:0008080;gene=rimI;Parent=GCA008085315_00145_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0456,COG:J,RefSeq:WP_005537944.1,SO:0001217,UniParc:UPI0001B9F1F8,UniRef:UniRef100_A0A142G261,UniRef:UniRef50_Q8ZJW4,UniRef:UniRef90_A0A142G261;ec_number=2.3.1.266 contig_1 Pyrodigal gene 160906 164322 . - . ID=GCA008085315_00146_gene;locus_tag=GCA008085315_00146;gene=recC contig_1 Pyrodigal CDS 160906 164322 . - 0 ID=GCA008085315_00146;Name=exodeoxyribonuclease V subunit gamma;locus_tag=GCA008085315_00146;product=exodeoxyribonuclease V subunit gamma;Dbxref=GO:0006281,GO:0006310,GO:0008854,GO:0009338;gene=recC;Parent=GCA008085315_00146_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1330,COG:L,KEGG:K03583,RefSeq:WP_148320635.1,SO:0001217,UniParc:UPI0011D35255,UniRef:UniRef100_UPI0011D35255,UniRef:UniRef50_Q9CM76,UniRef:UniRef90_A0A5D0EL82;ec_number=3.1.11.5 contig_1 Pyrodigal gene 164334 164636 . - . ID=GCA008085315_00147_gene;locus_tag=GCA008085315_00147 contig_1 Pyrodigal CDS 164334 164636 . - 0 ID=GCA008085315_00147;Name=Type II secretion system protein;locus_tag=GCA008085315_00147;product=Type II secretion system protein;Parent=GCA008085315_00147_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005545595.1,SO:0001217,UniParc:UPI0001B9F1FA,UniRef:UniRef100_UPI0001B9F1FA,UniRef:UniRef50_A0A2M8RX52,UniRef:UniRef90_A0A142G259 contig_1 Pyrodigal gene 164611 164985 . - . ID=GCA008085315_00148_gene;locus_tag=GCA008085315_00148 contig_1 Pyrodigal CDS 164611 164985 . - 0 ID=GCA008085315_00148;Name=hypothetical protein;locus_tag=GCA008085315_00148;product=hypothetical protein;Parent=GCA008085315_00148_gene;inference=ab initio prediction:Pyrodigal:3.5 contig_1 Pyrodigal gene 165075 165539 . - . ID=GCA008085315_00149_gene;locus_tag=GCA008085315_00149;pseudogene=unitary contig_1 Pyrodigal CDS 165075 165539 . - 0 ID=GCA008085315_00149;Name=type II secretion system protein J;locus_tag=GCA008085315_00149;product=type II secretion system protein J;pseudogene=unitary;Parent=GCA008085315_00149_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02680,SO:0001217,UniRef:UniRef50_P44080,UniRef:UniRef90_UPI0002ACAAC0 contig_1 Pyrodigal gene 165526 166047 . - . ID=GCA008085315_00150_gene;locus_tag=GCA008085315_00150 contig_1 Pyrodigal CDS 165526 166047 . - 0 ID=GCA008085315_00150;Name=type II secretion system protein;locus_tag=GCA008085315_00150;product=type II secretion system protein;Parent=GCA008085315_00150_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02679,RefSeq:WP_005573910.1,SO:0001217,UniParc:UPI00022ACF26,UniRef:UniRef100_UPI00039BA0D5,UniRef:UniRef50_UPI00039BA0D5,UniRef:UniRef90_UPI00039BA0D5 contig_1 tRNAscan-SE gene 166256 166332 . - . ID=GCA008085315_00151_gene;locus_tag=GCA008085315_00151;gene=trnK contig_1 tRNAscan-SE tRNA 166256 166332 . - . ID=GCA008085315_00151;Name=tRNA-Lys(ctt);locus_tag=GCA008085315_00151;product=tRNA-Lys(ctt);gene=trnK;anti_codon=ctt;amino_acid=Lys;Parent=GCA008085315_00151_gene;inference=profile:tRNAscan:2.0;Note=SO:0000265 contig_1 tRNAscan-SE gene 166358 166433 . - . ID=GCA008085315_00152_gene;locus_tag=GCA008085315_00152;gene=trnK contig_1 tRNAscan-SE tRNA 166358 166433 . - . ID=GCA008085315_00152;Name=tRNA-Lys(ttt);locus_tag=GCA008085315_00152;product=tRNA-Lys(ttt);gene=trnK;anti_codon=ttt;amino_acid=Lys;Parent=GCA008085315_00152_gene;inference=profile:tRNAscan:2.0;Note=SO:0000265 contig_1 tRNAscan-SE gene 166460 166535 . - . ID=GCA008085315_00153_gene;locus_tag=GCA008085315_00153;gene=trnK contig_1 tRNAscan-SE tRNA 166460 166535 . - . ID=GCA008085315_00153;Name=tRNA-Lys(ttt);locus_tag=GCA008085315_00153;product=tRNA-Lys(ttt);gene=trnK;anti_codon=ttt;amino_acid=Lys;Parent=GCA008085315_00153_gene;inference=profile:tRNAscan:2.0;Note=SO:0000265 contig_1 Infernal regulatory_region 166710 166851 9.6e-10 - . ID=FFLMJBKAJI_96;Name=CpoB/ybgF ICR thermometer;product=CpoB/ybgF ICR thermometer;Dbxref=RFAM:RF02782;inference=profile:Rfam:RF02782;Note=SO:0002168;regulatory_class=response_element contig_1 Pyrodigal gene 166752 167225 . - . ID=GCA008085315_00154_gene;locus_tag=GCA008085315_00154;gene=pal contig_1 Pyrodigal CDS 166752 167225 . - 0 ID=GCA008085315_00154;Name=peptidoglycan-associated lipoprotein Pal;locus_tag=GCA008085315_00154;product=peptidoglycan-associated lipoprotein Pal;Dbxref=GO:0009279;gene=pal;Parent=GCA008085315_00154_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2885,COG:M,RefSeq:WP_148320637.1,SO:0001217,UniParc:UPI0011D79F81,UniRef:UniRef100_UPI0011D79F81,UniRef:UniRef50_Q51886,UniRef:UniRef90_I6LEK5 contig_1 Pyrodigal gene 167240 168520 . - . ID=GCA008085315_00155_gene;locus_tag=GCA008085315_00155;gene=tolB contig_1 Pyrodigal CDS 167240 168520 . - 0 ID=GCA008085315_00155;Name=Tol-Pal system beta propeller repeat protein TolB;locus_tag=GCA008085315_00155;product=Tol-Pal system beta propeller repeat protein TolB;Dbxref=GO:0005215,GO:0017038,GO:0042597;gene=tolB;Parent=GCA008085315_00155_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0823,COG:U,RefSeq:WP_005545588.1,SO:0001217,UniParc:UPI0001B9F1FE,UniRef:UniRef100_UPI0001B9F1FE,UniRef:UniRef50_Q8EDJ8,UniRef:UniRef90_U1R182 contig_1 Pyrodigal gene 168555 169763 . - . ID=GCA008085315_00156_gene;locus_tag=GCA008085315_00156;gene=tolA contig_1 Pyrodigal CDS 168555 169763 . - 0 ID=GCA008085315_00156;Name=cell envelope integrity protein TolA;locus_tag=GCA008085315_00156;product=cell envelope integrity protein TolA;Dbxref=GO:0016020,GO:0019534,GO:0043213;gene=tolA;Parent=GCA008085315_00156_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3064,COG:M,KEGG:K03646,RefSeq:WP_005545586.1,SO:0001217,UniParc:UPI0001B9F1FF,UniRef:UniRef100_UPI0001B9F1FF,UniRef:UniRef50_P44678,UniRef:UniRef90_A0A5D0EJK8 contig_1 Pyrodigal gene 169780 170202 . - . ID=GCA008085315_00157_gene;locus_tag=GCA008085315_00157;gene=tolR contig_1 Pyrodigal CDS 169780 170202 . - 0 ID=GCA008085315_00157;Name=colicin uptake protein TolR;locus_tag=GCA008085315_00157;product=colicin uptake protein TolR;gene=tolR;Parent=GCA008085315_00157_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0848,COG:U,RefSeq:WP_005545585.1,SO:0001217,UniParc:UPI0001B9F200,UniRef:UniRef100_UPI0001B9F200,UniRef:UniRef50_P43769,UniRef:UniRef90_E6KYY4 contig_1 Pyrodigal gene 170288 170977 . - . ID=GCA008085315_00158_gene;locus_tag=GCA008085315_00158;gene=tolQ contig_1 Pyrodigal CDS 170288 170977 . - 0 ID=GCA008085315_00158;Name=protein TolQ;locus_tag=GCA008085315_00158;product=protein TolQ;Dbxref=GO:0016020,GO:0043213;gene=tolQ;Parent=GCA008085315_00158_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0811,COG:U,RefSeq:WP_005545584.1,SO:0001217,UniParc:UPI0001B9F201,UniRef:UniRef100_A0A142G251,UniRef:UniRef50_P0ABU9,UniRef:UniRef90_A0A142G251 contig_1 Pyrodigal gene 171007 171411 . - . ID=GCA008085315_00159_gene;locus_tag=GCA008085315_00159;gene=ybgC contig_1 Pyrodigal CDS 171007 171411 . - 0 ID=GCA008085315_00159;Name=tol-pal system-associated acyl-CoA thioesterase;locus_tag=GCA008085315_00159;product=tol-pal system-associated acyl-CoA thioesterase;Dbxref=GO:0005737,GO:0047617;gene=ybgC;Parent=GCA008085315_00159_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0824,COG:I,KEGG:K07107,RefSeq:WP_005545583.1,SO:0001217,UniParc:UPI0001B9F202,UniRef:UniRef100_UPI0001B9F202,UniRef:UniRef50_P44679,UniRef:UniRef90_A0A142G250;ec_number=3.1.2.- contig_1 Pyrodigal gene 171527 171805 . - . ID=GCA008085315_00160_gene;locus_tag=GCA008085315_00160;gene=ybgE contig_1 Pyrodigal CDS 171527 171805 . - 0 ID=GCA008085315_00160;Name=cyd operon protein YbgE;locus_tag=GCA008085315_00160;product=cyd operon protein YbgE;gene=ybgE;Parent=GCA008085315_00160_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3790,COG:S,RefSeq:WP_005587199.1,SO:0001217,UniParc:UPI0002AC2130,UniRef:UniRef100_UPI0002AC2130,UniRef:UniRef50_E6KYY7,UniRef:UniRef90_G4A907 contig_1 Pyrodigal gene 171810 171908 . - . ID=GCA008085315_00161_gene;locus_tag=GCA008085315_00161 contig_1 Pyrodigal CDS 171810 171908 . - 0 ID=GCA008085315_00161;Name=Cytochrome bd oxidase small subunit%2C CydX/CbdX family;locus_tag=GCA008085315_00161;product=Cytochrome bd oxidase small subunit%2C CydX/CbdX family;Parent=GCA008085315_00161_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_019518193.1,SO:0001217,UniParc:UPI000369AB23,UniRef:UniRef100_A0A5D0EJT4,UniRef:UniRef50_Q7VKT8,UniRef:UniRef90_A0A5D0EJT4 contig_1 Pyrodigal gene 171920 173056 . - . ID=GCA008085315_00162_gene;locus_tag=GCA008085315_00162;gene=cydB contig_1 Pyrodigal CDS 171920 173056 . - 0 ID=GCA008085315_00162;Name=cytochrome d ubiquinol oxidase subunit II;locus_tag=GCA008085315_00162;product=cytochrome d ubiquinol oxidase subunit II;Dbxref=GO:0016682;gene=cydB;Parent=GCA008085315_00162_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1294,KEGG:K00426,RefSeq:WP_005542295.1,SO:0001217,UniParc:UPI0001B9F204,UniRef:UniRef100_A0A142G248,UniRef:UniRef50_P0ABK2,UniRef:UniRef90_A0A336NCG3;ec_number=7.1.1.7 contig_1 Pyrodigal gene 173071 174636 . - . ID=GCA008085315_00163_gene;locus_tag=GCA008085315_00163;gene=appC contig_1 Pyrodigal CDS 173071 174636 . - 0 ID=GCA008085315_00163;Name=Cytochrome d ubiquinol oxidase subunit 1;locus_tag=GCA008085315_00163;product=Cytochrome d ubiquinol oxidase subunit 1;gene=appC;Parent=GCA008085315_00163_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1271,KEGG:K00425,RefSeq:WP_005545579.1,SO:0001217,UniParc:UPI00022AC545,UniRef:UniRef100_UPI00022AC545,UniRef:UniRef50_P0ABJ9,UniRef:UniRef90_A0A448FBF5;ec_number=7.1.1.7 contig_1 Pyrodigal gene 175088 175399 . + . ID=GCA008085315_00164_gene;locus_tag=GCA008085315_00164;gene=ruvB contig_1 Pyrodigal CDS 175088 175399 . + 0 ID=GCA008085315_00164;Name=ATP-dependent DNA helicase RuvB;locus_tag=GCA008085315_00164;product=ATP-dependent DNA helicase RuvB;gene=ruvB;Parent=GCA008085315_00164_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005542297.1,SO:0001217,UniParc:UPI0001B9F206,UniRef:UniRef100_A0A5D0L2N6,UniRef:UniRef50_P43982,UniRef:UniRef90_A0A5D0L2N6 contig_1 Pyrodigal gene 175453 176466 . - . ID=GCA008085315_00165_gene;locus_tag=GCA008085315_00165;gene=ruvB contig_1 Pyrodigal CDS 175453 176466 . - 0 ID=GCA008085315_00165;Name=Holliday junction branch migration DNA helicase RuvB;locus_tag=GCA008085315_00165;product=Holliday junction branch migration DNA helicase RuvB;Dbxref=GO:0003677,GO:0005524,GO:0006281,GO:0006310,GO:0009378;gene=ruvB;Parent=GCA008085315_00165_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2255,COG:L,RefSeq:WP_005545577.1,SO:0001217,UniParc:UPI0001CA7321,UniRef:UniRef100_A0A142G245,UniRef:UniRef50_O32055,UniRef:UniRef90_E6KYZ1;ec_number=3.6.4.12 contig_1 Pyrodigal gene 176481 177095 . - . ID=GCA008085315_00166_gene;locus_tag=GCA008085315_00166;gene=ruvA contig_1 Pyrodigal CDS 176481 177095 . - 0 ID=GCA008085315_00166;Name=Holliday junction branch migration protein RuvA;locus_tag=GCA008085315_00166;product=Holliday junction branch migration protein RuvA;Dbxref=GO:0003678,GO:0006281,GO:0006310,GO:0009378,GO:0009379;gene=ruvA;Parent=GCA008085315_00166_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0632,COG:L,RefSeq:WP_005545575.1,SO:0001217,UniParc:UPI0001B9F208,UniRef:UniRef100_UPI0001B9F208,UniRef:UniRef50_P44632,UniRef:UniRef90_E6KYZ2;ec_number=3.6.4.12 contig_1 Pyrodigal gene 177159 177731 . - . ID=GCA008085315_00167_gene;locus_tag=GCA008085315_00167;gene=ruvC contig_1 Pyrodigal CDS 177159 177731 . - 0 ID=GCA008085315_00167;Name=crossover junction endodeoxyribonuclease RuvC;locus_tag=GCA008085315_00167;product=crossover junction endodeoxyribonuclease RuvC;Dbxref=GO:0000287,GO:0003677,GO:0005737,GO:0006281,GO:0006310,GO:0008821,GO:0048476;gene=ruvC;Parent=GCA008085315_00167_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0817,COG:L,KEGG:K01159,RefSeq:WP_148320639.1,SO:0001217,UniParc:UPI0011D82966,UniRef:UniRef100_UPI0011D82966,UniRef:UniRef50_A6VQA5,UniRef:UniRef90_P44633;ec_number=3.1.21.10 contig_1 Pyrodigal gene 177787 178197 . - . ID=GCA008085315_00168_gene;locus_tag=GCA008085315_00168 contig_1 Pyrodigal CDS 177787 178197 . - 0 ID=GCA008085315_00168;Name=Excinuclease ABC subunit A;locus_tag=GCA008085315_00168;product=Excinuclease ABC subunit A;Parent=GCA008085315_00168_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005545571.1,SO:0001217,UniParc:UPI0001B9F20A,UniRef:UniRef100_UPI0001B9F20A,UniRef:UniRef50_A0A142G242,UniRef:UniRef90_A0A142G242 contig_1 Pyrodigal gene 178209 178949 . - . ID=GCA008085315_00169_gene;locus_tag=GCA008085315_00169;gene=tACO1 contig_1 Pyrodigal CDS 178209 178949 . - 0 ID=GCA008085315_00169;Name=YebC/PmpR family DNA-binding transcriptional regulator;locus_tag=GCA008085315_00169;product=YebC/PmpR family DNA-binding transcriptional regulator;Dbxref=GO:0003677,GO:0005829,GO:0006355;gene=tACO1;Parent=GCA008085315_00169_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0217,COG:KJ,RefSeq:WP_148320641.1,SO:0001217,UniParc:UPI0011D7A112,UniRef:UniRef100_UPI0011D7A112,UniRef:UniRef50_Q51423,UniRef:UniRef90_B0UVY2 contig_1 Pyrodigal gene 178983 179354 . - . ID=GCA008085315_00170_gene;locus_tag=GCA008085315_00170;gene=nudB contig_1 Pyrodigal CDS 178983 179354 . - 0 ID=GCA008085315_00170;Name=dihydroneopterin triphosphate diphosphatase;locus_tag=GCA008085315_00170;product=dihydroneopterin triphosphate diphosphatase;Dbxref=GO:0008828,GO:0019177,GO:0046656;gene=nudB;Parent=GCA008085315_00170_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0494,COG:V,SO:0001217,UniRef:UniRef50_P44635,UniRef:UniRef90_A0A5D0EM99;ec_number=3.6.1.67 contig_1 Pyrodigal gene 179535 180803 . - . ID=GCA008085315_00171_gene;locus_tag=GCA008085315_00171;gene=mntH contig_1 Pyrodigal CDS 179535 180803 . - 0 ID=GCA008085315_00171;Name=Nramp family divalent metal transporter;locus_tag=GCA008085315_00171;product=Nramp family divalent metal transporter;Dbxref=GO:0016020,GO:0022857,GO:0055085;gene=mntH;Parent=GCA008085315_00171_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1914,COG:P,RefSeq:WP_005545562.1,SO:0001217,UniParc:UPI0001B9F20D,UniRef:UniRef100_UPI0001B9F20D,UniRef:UniRef50_P57864,UniRef:UniRef90_E6KYZ7 contig_1 Pyrodigal gene 181195 182970 . - . ID=GCA008085315_00172_gene;locus_tag=GCA008085315_00172;gene=aspS contig_1 Pyrodigal CDS 181195 182970 . - 0 ID=GCA008085315_00172;Name=aspartate--tRNA ligase;locus_tag=GCA008085315_00172;product=aspartate--tRNA ligase;Dbxref=GO:0003676,GO:0004815,GO:0005524,GO:0005737,GO:0006422;gene=aspS;Parent=GCA008085315_00172_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0173,COG:J,SO:0001217,UniRef:UniRef50_Q15RN2,UniRef:UniRef90_P43817;ec_number=6.1.1.12 contig_1 Pyrodigal gene 183181 183708 . + . ID=GCA008085315_00173_gene;locus_tag=GCA008085315_00173;gene=ypbQ contig_1 Pyrodigal CDS 183181 183708 . + 0 ID=GCA008085315_00173;Name=DUF1295 domain-containing protein;locus_tag=GCA008085315_00173;product=DUF1295 domain-containing protein;gene=ypbQ;Parent=GCA008085315_00173_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1755,COG:S,RefSeq:WP_005539902.1,SO:0001217,UniParc:UPI0001B9F210,UniRef:UniRef100_A0A142G236,UniRef:UniRef50_B2RLS1,UniRef:UniRef90_A0A142G236 contig_1 Pyrodigal gene 183780 184505 . + . ID=GCA008085315_00174_gene;locus_tag=GCA008085315_00174;gene=cmoA contig_1 Pyrodigal CDS 183780 184505 . + 0 ID=GCA008085315_00174;Name=carboxy-S-adenosyl-L-methionine synthase CmoA;locus_tag=GCA008085315_00174;product=carboxy-S-adenosyl-L-methionine synthase CmoA;Dbxref=GO:0002098;gene=cmoA;Parent=GCA008085315_00174_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG4106,RefSeq:WP_005545556.1,SO:0001217,UniParc:UPI0001B9F261,UniRef:UniRef100_UPI0001B9F261,UniRef:UniRef50_A0KWL3,UniRef:UniRef90_G4A8Z4 contig_1 Pyrodigal gene 184585 187152 . - . ID=GCA008085315_00175_gene;locus_tag=GCA008085315_00175 contig_1 Pyrodigal CDS 184585 187152 . - 0 ID=GCA008085315_00175;Name=DUF4401 domain-containing protein;locus_tag=GCA008085315_00175;product=DUF4401 domain-containing protein;Parent=GCA008085315_00175_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4984,COG:S,RefSeq:WP_005545542.1,SO:0001217,UniParc:UPI0001B9F267,UniRef:UniRef100_UPI0001B9F267,UniRef:UniRef50_E6KZ01,UniRef:UniRef90_G4A8Z3 contig_1 Pyrodigal gene 187295 188626 . - . ID=GCA008085315_00176_gene;locus_tag=GCA008085315_00176;gene=uhpC contig_1 Pyrodigal CDS 187295 188626 . - 0 ID=GCA008085315_00176;Name=sn-glycerol-3-phosphate transporter;locus_tag=GCA008085315_00176;product=sn-glycerol-3-phosphate transporter;gene=uhpC;Parent=GCA008085315_00176_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2271,COG:G,KEGG:K02445,RefSeq:WP_005539895.1,SO:0001217,UniParc:UPI0001B9F268,UniRef:UniRef100_A0A142G233,UniRef:UniRef50_W3Y384,UniRef:UniRef90_A0A011MJY3 contig_1 Pyrodigal gene 189027 190979 . + . ID=GCA008085315_00177_gene;locus_tag=GCA008085315_00177;gene=cirA contig_1 Pyrodigal CDS 189027 190979 . + 0 ID=GCA008085315_00177;Name=Brucella heme uptake protein A;locus_tag=GCA008085315_00177;product=Brucella heme uptake protein A;gene=cirA;Parent=GCA008085315_00177_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1629,COG:P,KEGG:K16087,RefSeq:WP_005545539.1,SO:0001217,UniParc:UPI00022AD10A,UniRef:UniRef100_UPI00022AD10A,UniRef:UniRef50_A0A379AXE0,UniRef:UniRef90_A0A336N434 contig_1 Pyrodigal gene 191138 191545 . + . ID=GCA008085315_00178_gene;locus_tag=GCA008085315_00178;gene=gloA contig_1 Pyrodigal CDS 191138 191545 . + 0 ID=GCA008085315_00178;Name=lactoylglutathione lyase;locus_tag=GCA008085315_00178;product=lactoylglutathione lyase;Dbxref=GO:0004462,GO:0046872,GO:0051596;gene=gloA;Parent=GCA008085315_00178_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0346,COG:Q,RefSeq:WP_005588340.1,SO:0001217,UniParc:UPI0001B9F26A,UniRef:UniRef100_UPI0001B9F26A,UniRef:UniRef50_A0A086FGJ5,UniRef:UniRef90_U1QWD3;ec_number=4.4.1.5 contig_1 Pyrodigal gene 191632 192285 . + . ID=GCA008085315_00179_gene;locus_tag=GCA008085315_00179;gene=rnt contig_1 Pyrodigal CDS 191632 192285 . + 0 ID=GCA008085315_00179;Name=ribonuclease T;locus_tag=GCA008085315_00179;product=ribonuclease T;Dbxref=GO:0006364,GO:0016896,GO:0042780;gene=rnt;Parent=GCA008085315_00179_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0847,COG:L,KEGG:K03683,RefSeq:WP_005539889.1,SO:0001217,UniParc:UPI0001B9F26B,UniRef:UniRef100_UPI0001B9F26B,UniRef:UniRef50_P30014,UniRef:UniRef90_A0A142G230;ec_number=3.1.13.- contig_1 Infernal regulatory_region 192410 192539 2e-10 + . ID=FFLMJBKAJI_95;Name=Histidine operon leader;product=Histidine operon leader;Dbxref=RFAM:RF00514;inference=profile:Rfam:RF00514;Note=SO:0000140;regulatory_class=attenuator contig_1 Pyrodigal gene 192637 193989 . + . ID=GCA008085315_00180_gene;locus_tag=GCA008085315_00180;gene=yuiF contig_1 Pyrodigal CDS 192637 193989 . + 0 ID=GCA008085315_00180;Name=Na+/H+ antiporter family protein;locus_tag=GCA008085315_00180;product=Na+/H+ antiporter family protein;gene=yuiF;Parent=GCA008085315_00180_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2056,COG:E,KEGG:K07084,RefSeq:WP_148320643.1,SO:0001217,UniParc:UPI0011D536D1,UniRef:UniRef100_UPI0011D536D1,UniRef:UniRef50_E3NU98,UniRef:UniRef90_A0A5D0EM83 contig_1 Pyrodigal gene 194053 194619 . + . ID=GCA008085315_00181_gene;locus_tag=GCA008085315_00181;gene=priC contig_1 Pyrodigal CDS 194053 194619 . + 0 ID=GCA008085315_00181;Name=Primosomal replication protein N;locus_tag=GCA008085315_00181;product=Primosomal replication protein N;gene=priC;Parent=GCA008085315_00181_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3923,COG:L,KEGG:K04067,RefSeq:WP_005539886.1,SO:0001217,UniParc:UPI0001B9F26D,UniRef:UniRef100_UPI0001B9F26D,UniRef:UniRef50_E6KZ07,UniRef:UniRef90_A0A142G228 contig_1 Pyrodigal gene 194676 196100 . - . ID=GCA008085315_00182_gene;locus_tag=GCA008085315_00182;gene=miaB contig_1 Pyrodigal CDS 194676 196100 . - 0 ID=GCA008085315_00182;Name=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;locus_tag=GCA008085315_00182;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;Dbxref=GO:0005829,GO:0006400,GO:0016782,GO:0035597,GO:0046872,GO:0051539,GO:1904047;gene=miaB;Parent=GCA008085315_00182_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0621,COG:J,KEGG:K06168,RefSeq:WP_005564463.1,SO:0001217,UniParc:UPI0001B9F26E,UniRef:UniRef100_UPI0001B9F26E,UniRef:UniRef50_Q9KTE0,UniRef:UniRef90_Q9L699;ec_number=2.8.4.3 contig_1 Pyrodigal gene 196804 197112 . - . ID=GCA008085315_00183_gene;locus_tag=GCA008085315_00183 contig_1 Pyrodigal CDS 196804 197112 . - 0 ID=GCA008085315_00183;Name=YecR-like lipofamily protein;locus_tag=GCA008085315_00183;product=YecR-like lipofamily protein;Parent=GCA008085315_00183_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005568275.1,SO:0001217,UniParc:UPI00022AC57C,UniRef:UniRef100_UPI00022AC57C,UniRef:UniRef50_A0A1V3IX83,UniRef:UniRef90_UPI0021CC5439 contig_1 Pyrodigal gene 197301 198032 . - . ID=GCA008085315_00184_gene;locus_tag=GCA008085315_00184;gene=queH contig_1 Pyrodigal CDS 197301 198032 . - 0 ID=GCA008085315_00184;Name=Epoxyqueuosine reductase QueH;locus_tag=GCA008085315_00184;product=Epoxyqueuosine reductase QueH;gene=queH;Parent=GCA008085315_00184_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1636,COG:J,KEGG:K09765,RefSeq:WP_005539879.1,SO:0001217,UniParc:UPI0001B9F271,UniRef:UniRef100_UPI0001B9F271,UniRef:UniRef50_Q0I1Q0,UniRef:UniRef90_A0A1B3JHR6;ec_number=1.17.99.6 contig_1 Pyrodigal gene 198034 199005 . - . ID=GCA008085315_00185_gene;locus_tag=GCA008085315_00185;gene=ispB contig_1 Pyrodigal CDS 198034 199005 . - 0 ID=GCA008085315_00185;Name=octaprenyl diphosphate synthase;locus_tag=GCA008085315_00185;product=octaprenyl diphosphate synthase;Dbxref=GO:0008299;gene=ispB;Parent=GCA008085315_00185_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0142,COG:H,KEGG:K02523,RefSeq:WP_005539877.1,SO:0001217,UniParc:UPI00022AC57D,UniRef:UniRef100_UPI0001B9F272,UniRef:UniRef50_F4BKL8,UniRef:UniRef90_E6KZ11;ec_number=2.5.1.90 contig_1 Pyrodigal gene 199271 199582 . + . ID=GCA008085315_00186_gene;locus_tag=GCA008085315_00186;gene=rplU contig_1 Pyrodigal CDS 199271 199582 . + 0 ID=GCA008085315_00186;Name=50S ribosomal protein L21;locus_tag=GCA008085315_00186;product=50S ribosomal protein L21;Dbxref=GO:0003723,GO:0003735,GO:0005737,GO:0005840,GO:0006412,GO:0019843,GO:1990904;gene=rplU;Parent=GCA008085315_00186_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0261,COG:J,KEGG:K02888,RefSeq:WP_005539876.1,SO:0001217,UniParc:UPI0001B9F273,UniRef:UniRef100_UPI0001B9F273,UniRef:UniRef50_Q65S54,UniRef:UniRef90_Q65S54 contig_1 Pyrodigal gene 199603 199860 . + . ID=GCA008085315_00187_gene;locus_tag=GCA008085315_00187;gene=rpmA contig_1 Pyrodigal CDS 199603 199860 . + 0 ID=GCA008085315_00187;Name=50S ribosomal protein L27;locus_tag=GCA008085315_00187;product=50S ribosomal protein L27;Dbxref=GO:0000315,GO:0003735,GO:0006412,GO:0022625;gene=rpmA;Parent=GCA008085315_00187_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0211,COG:J,KEGG:K02899,RefSeq:WP_005539872.1,SO:0001217,UniParc:UPI000039A461,UniRef:UniRef100_Q4QM29,UniRef:UniRef50_P44363,UniRef:UniRef90_P44363 contig_1 Pyrodigal gene 199932 200864 . + . ID=GCA008085315_00188_gene;locus_tag=GCA008085315_00188;gene=rhaT contig_1 Pyrodigal CDS 199932 200864 . + 0 ID=GCA008085315_00188;Name=RhaT protein;locus_tag=GCA008085315_00188;product=RhaT protein;gene=rhaT;Parent=GCA008085315_00188_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0697,COG:GER,RefSeq:WP_148333944.1,SO:0001217,UniParc:UPI0011D9C238,UniRef:UniRef100_UPI0011D9C238,UniRef:UniRef50_P71360,UniRef:UniRef90_G4AAV5 contig_1 Pyrodigal gene 200942 201859 . + . ID=GCA008085315_00189_gene;locus_tag=GCA008085315_00189;gene=rhaT contig_1 Pyrodigal CDS 200942 201859 . + 0 ID=GCA008085315_00189;Name=Transporter;locus_tag=GCA008085315_00189;product=Transporter;gene=rhaT;Parent=GCA008085315_00189_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0697,COG:GER,RefSeq:WP_148333945.1,SO:0001217,UniParc:UPI0011DB36E7,UniRef:UniRef100_UPI0011DB36E7,UniRef:UniRef50_P71360,UniRef:UniRef90_A0A5D0EJC5 contig_1 Pyrodigal gene 201896 203071 . + . ID=GCA008085315_00190_gene;locus_tag=GCA008085315_00190;gene=cgtA contig_1 Pyrodigal CDS 201896 203071 . + 0 ID=GCA008085315_00190;Name=Obg family GTPase CgtA;locus_tag=GCA008085315_00190;product=Obg family GTPase CgtA;Dbxref=GO:0000287,GO:0003924,GO:0005525;gene=cgtA;Parent=GCA008085315_00190_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0536,COG:DL,RefSeq:WP_148320647.1,SO:0001217,UniParc:UPI0011D93DDC,UniRef:UniRef100_UPI0011D93DDC,UniRef:UniRef50_P42641,UniRef:UniRef90_A0A5D0EM84 contig_1 Pyrodigal gene 203139 203621 . - . ID=GCA008085315_00191_gene;locus_tag=GCA008085315_00191;gene=smpB contig_1 Pyrodigal CDS 203139 203621 . - 0 ID=GCA008085315_00191;Name=SsrA-binding protein SmpB;locus_tag=GCA008085315_00191;product=SsrA-binding protein SmpB;Dbxref=GO:0003723;gene=smpB;Parent=GCA008085315_00191_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0691,COG:O,KEGG:K03664,RefSeq:WP_005539843.1,SO:0001217,UniParc:UPI0001B9F278,UniRef:UniRef100_UPI0001B9F278,UniRef:UniRef50_Q5NFP4,UniRef:UniRef90_E6KZ16 contig_1 Pyrodigal gene 203989 205614 . + . ID=GCA008085315_00192_gene;locus_tag=GCA008085315_00192;gene=oppA contig_1 Pyrodigal CDS 203989 205614 . + 0 ID=GCA008085315_00192;Name=Periplasmic oligopeptide-binding protein;locus_tag=GCA008085315_00192;product=Periplasmic oligopeptide-binding protein;gene=oppA;Parent=GCA008085315_00192_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4166,COG:E,KEGG:K15580,RefSeq:WP_005568284.1,SO:0001217,UniParc:UPI00022AC581,UniRef:UniRef100_UPI00022AC581,UniRef:UniRef50_P71370,UniRef:UniRef90_A0A3S4QT99 contig_1 Pyrodigal gene 205715 206635 . + . ID=GCA008085315_00193_gene;locus_tag=GCA008085315_00193;gene=oppB contig_1 Pyrodigal CDS 205715 206635 . + 0 ID=GCA008085315_00193;Name=oligopeptide ABC transporter permease OppB;locus_tag=GCA008085315_00193;product=oligopeptide ABC transporter permease OppB;Dbxref=GO:0016020,GO:0055085;gene=oppB;Parent=GCA008085315_00193_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0601,COG:EP,RefSeq:WP_005539833.1,SO:0001217,UniParc:UPI0001B9F27C,UniRef:UniRef100_UPI0001B9F27C,UniRef:UniRef50_P0AFH2,UniRef:UniRef90_A0A1V3KG95;ec_number=7.4.2.- contig_1 Pyrodigal gene 206645 207583 . + . ID=GCA008085315_00194_gene;locus_tag=GCA008085315_00194;gene=oppC contig_1 Pyrodigal CDS 206645 207583 . + 0 ID=GCA008085315_00194;Name=oligopeptide ABC transporter permease OppC;locus_tag=GCA008085315_00194;product=oligopeptide ABC transporter permease OppC;Dbxref=GO:0055085;gene=oppC;Parent=GCA008085315_00194_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1173,COG:EP,RefSeq:WP_005545527.1,SO:0001217,UniParc:UPI0001B9F27D,UniRef:UniRef100_UPI0001B9F27D,UniRef:UniRef50_D3VH90,UniRef:UniRef90_A0A5D0EJT7;ec_number=7.4.2.- contig_1 Pyrodigal gene 207593 208576 . + . ID=GCA008085315_00195_gene;locus_tag=GCA008085315_00195;gene=dppD contig_1 Pyrodigal CDS 207593 208576 . + 0 ID=GCA008085315_00195;Name=Glutathione import ATP-binding protein GsiA;locus_tag=GCA008085315_00195;product=Glutathione import ATP-binding protein GsiA;gene=dppD;Parent=GCA008085315_00195_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0444,COG:EP,RefSeq:WP_005539826.1,SO:0001217,UniParc:UPI0001B9F27E,UniRef:UniRef100_UPI0001B9F27E,UniRef:UniRef50_A0A6B1ELF6,UniRef:UniRef90_A0A336N363 contig_1 Pyrodigal gene 208573 209571 . + . ID=GCA008085315_00196_gene;locus_tag=GCA008085315_00196;gene=oppF contig_1 Pyrodigal CDS 208573 209571 . + 0 ID=GCA008085315_00196;Name=murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF;locus_tag=GCA008085315_00196;product=murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF;Dbxref=GO:0005524,GO:0005886,GO:0015031,GO:0015833,GO:0016887,GO:0055085;gene=oppF;Parent=GCA008085315_00196_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0444,COG:EP,RefSeq:WP_005539824.1,SO:0001217,UniParc:UPI0001B9F27F,UniRef:UniRef100_UPI0001B9F27F,UniRef:UniRef50_P77737,UniRef:UniRef90_P45051;ec_number=7.4.2.6 contig_1 Pyrodigal gene 209678 210385 . - . ID=GCA008085315_00197_gene;locus_tag=GCA008085315_00197;gene=arcA contig_1 Pyrodigal CDS 209678 210385 . - 0 ID=GCA008085315_00197;Name=two-component system response regulator ArcA;locus_tag=GCA008085315_00197;product=two-component system response regulator ArcA;gene=arcA;Parent=GCA008085315_00197_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0745,COG:TK,KEGG:K07773,RefSeq:WP_005539822.1,SO:0001217,UniParc:UPI0001B9F280,UniRef:UniRef100_UPI0001B9F280,UniRef:UniRef50_P0A9Q1,UniRef:UniRef90_A0A142G213 contig_1 Pyrodigal gene 210795 211061 . - . ID=GCA008085315_00198_gene;locus_tag=GCA008085315_00198;gene=rpmE2 contig_1 Pyrodigal CDS 210795 211061 . - 0 ID=GCA008085315_00198;Name=type B 50S ribosomal protein L31;locus_tag=GCA008085315_00198;product=type B 50S ribosomal protein L31;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:1990904;gene=rpmE2;Parent=GCA008085315_00198_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0254,COG:J,RefSeq:WP_005539816.1,SO:0001217,UniParc:UPI0001B9F281,UniRef:UniRef100_A0A142G211,UniRef:UniRef50_Q9JZQ4,UniRef:UniRef90_Q9CP41 contig_1 Pyrodigal gene 211273 211842 . - . ID=GCA008085315_00199_gene;locus_tag=GCA008085315_00199;gene=ppnN contig_1 Pyrodigal CDS 211273 211842 . - 0 ID=GCA008085315_00199;Name=Cytokinin riboside 5'-monophosphate phosphoribohydrolase;locus_tag=GCA008085315_00199;product=Cytokinin riboside 5'-monophosphate phosphoribohydrolase;gene=ppnN;Parent=GCA008085315_00199_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1611,COG:F,KEGG:K22522,RefSeq:WP_005539814.1,SO:0001217,UniParc:UPI0001B9F282,UniRef:UniRef100_UPI0001B9F282,UniRef:UniRef50_A0A6I0FHY4,UniRef:UniRef90_A0A142G210;ec_number=3.2.2.- contig_1 Pyrodigal gene 211985 213775 . + . ID=GCA008085315_00200_gene;locus_tag=GCA008085315_00200;gene=dsbD contig_1 Pyrodigal CDS 211985 213775 . + 0 ID=GCA008085315_00200;Name=Thiol:disulfide interchange protein DsbD;locus_tag=GCA008085315_00200;product=Thiol:disulfide interchange protein DsbD;gene=dsbD;Parent=GCA008085315_00200_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4232,COG:O,KEGG:K04084,SO:0001217,UniRef:UniRef50_A0A448TS49,UniRef:UniRef90_A0A5D0EM85;ec_number=1.8.4.16 contig_1 Pyrodigal gene 213855 214244 . + . ID=GCA008085315_00201_gene;locus_tag=GCA008085315_00201;gene=doxX contig_1 Pyrodigal CDS 213855 214244 . + 0 ID=GCA008085315_00201;Name=Bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;locus_tag=GCA008085315_00201;product=Bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;gene=doxX;Parent=GCA008085315_00201_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2259,COG:S,RefSeq:WP_005539808.1,SO:0001217,UniParc:UPI0001B9F285,UniRef:UniRef100_A0A142G208,UniRef:UniRef50_P44069,UniRef:UniRef90_G4AAU1 contig_1 tRNAscan-SE gene 214501 214590 . - . ID=GCA008085315_00202_gene;locus_tag=GCA008085315_00202;gene=trnS contig_1 tRNAscan-SE tRNA 214501 214590 . - . ID=GCA008085315_00202;Name=tRNA-Ser(tga);locus_tag=GCA008085315_00202;product=tRNA-Ser(tga);gene=trnS;anti_codon=tga;amino_acid=Ser;Parent=GCA008085315_00202_gene;inference=profile:tRNAscan:2.0;Note=SO:0000269 contig_1 Pyrodigal gene 214642 217533 . - . ID=GCA008085315_00203_gene;locus_tag=GCA008085315_00203;gene=rne contig_1 Pyrodigal CDS 214642 217533 . - 0 ID=GCA008085315_00203;Name=ribonuclease E;locus_tag=GCA008085315_00203;product=ribonuclease E;Dbxref=GO:0003723,GO:0006396,GO:0008995;gene=rne;Parent=GCA008085315_00203_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1530,COG:J,KEGG:K08300,RefSeq:WP_005588348.1,SO:0001217,UniParc:UPI0002AD0CE2,UniRef:UniRef100_UPI0002AD0CE2,UniRef:UniRef50_P44443,UniRef:UniRef90_A0A5D0EL67;ec_number=3.1.26.12 contig_1 Pyrodigal gene 217999 218958 . + . ID=GCA008085315_00204_gene;locus_tag=GCA008085315_00204;gene=rluC contig_1 Pyrodigal CDS 217999 218958 . + 0 ID=GCA008085315_00204;Name=23S rRNA pseudouridine(955/2504/2580) synthase RluC;locus_tag=GCA008085315_00204;product=23S rRNA pseudouridine(955/2504/2580) synthase RluC;Dbxref=GO:0001522,GO:0003723,GO:0009982;gene=rluC;Parent=GCA008085315_00204_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0564,COG:J,KEGG:K06179,RefSeq:WP_005568299.1,SO:0001217,UniParc:UPI0001B9F2D7,UniRef:UniRef100_UPI0001B9F2D7,UniRef:UniRef50_Q9CM51,UniRef:UniRef90_A0A142G206;ec_number=5.4.99.24 contig_1 Infernal gene 218963 219069 . + . ID=GCA008085315_00205_gene;locus_tag=GCA008085315_00205;gene=AaHKsRNA22 contig_1 Infernal ncRNA 218963 219069 8.1e-08 + . ID=GCA008085315_00205;Name=Aggregatibacter sRNA 22;locus_tag=GCA008085315_00205;product=Aggregatibacter sRNA 22;Dbxref=RFAM:RF02902;Parent=GCA008085315_00205_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02902 contig_1 Pyrodigal gene 219157 219480 . - . ID=GCA008085315_00206_gene;locus_tag=GCA008085315_00206;gene=trxA contig_1 Pyrodigal CDS 219157 219480 . - 0 ID=GCA008085315_00206;Name=thioredoxin;locus_tag=GCA008085315_00206;product=thioredoxin;Dbxref=GO:0015035;gene=trxA;Parent=GCA008085315_00206_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3118,COG:O,RefSeq:WP_005550389.1,SO:0001217,UniParc:UPI00000B4AB7,UniRef:UniRef100_Q9AJR5,UniRef:UniRef50_P33791,UniRef:UniRef90_Q9AJR5 contig_1 Pyrodigal gene 219580 220575 . - . ID=GCA008085315_00207_gene;locus_tag=GCA008085315_00207;gene=ldhA contig_1 Pyrodigal CDS 219580 220575 . - 0 ID=GCA008085315_00207;Name=D-lactate dehydrogenase;locus_tag=GCA008085315_00207;product=D-lactate dehydrogenase;gene=ldhA;Parent=GCA008085315_00207_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CHR,COG:COG1052,RefSeq:WP_005545502.1,SO:0001217,UniParc:UPI0001B9F2D9,UniRef:UniRef100_UPI0001B9F2D9,UniRef:UniRef50_P52643,UniRef:UniRef90_E6KZ34 contig_1 Pyrodigal gene 220599 221708 . - . ID=GCA008085315_00208_gene;locus_tag=GCA008085315_00208;gene=metC contig_1 Pyrodigal CDS 220599 221708 . - 0 ID=GCA008085315_00208;Name=methionine biosynthesis PLP-dependent protein;locus_tag=GCA008085315_00208;product=methionine biosynthesis PLP-dependent protein;gene=metC;Parent=GCA008085315_00208_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0626,COG:E,RefSeq:WP_005568301.1,SO:0001217,UniParc:UPI00022AC58A,UniRef:UniRef100_UPI00022AC58A,UniRef:UniRef50_K0J5D8,UniRef:UniRef90_A0A336N3Y7 contig_1 tRNAscan-SE gene 221945 222020 . + . ID=GCA008085315_00209_gene;locus_tag=GCA008085315_00209;gene=trnG contig_1 tRNAscan-SE tRNA 221945 222020 . + . ID=GCA008085315_00209;Name=tRNA-Gly(gcc);locus_tag=GCA008085315_00209;product=tRNA-Gly(gcc);gene=trnG;anti_codon=gcc;amino_acid=Gly;Parent=GCA008085315_00209_gene;inference=profile:tRNAscan:2.0;Note=SO:0000260 contig_1 tRNAscan-SE gene 222029 222102 . + . ID=GCA008085315_00210_gene;locus_tag=GCA008085315_00210;gene=trnC contig_1 tRNAscan-SE tRNA 222029 222102 . + . ID=GCA008085315_00210;Name=tRNA-Cys(gca);locus_tag=GCA008085315_00210;product=tRNA-Cys(gca);gene=trnC;anti_codon=gca;amino_acid=Cys;Parent=GCA008085315_00210_gene;inference=profile:tRNAscan:2.0;Note=SO:0000258 contig_1 Pyrodigal gene 222709 223410 . + . ID=GCA008085315_00211_gene;locus_tag=GCA008085315_00211;gene=virB1 contig_1 Pyrodigal CDS 222709 223410 . + 0 ID=GCA008085315_00211;Name=VirB8/TrbF family protein;locus_tag=GCA008085315_00211;product=VirB8/TrbF family protein;gene=virB1;Parent=GCA008085315_00211_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG6031,COG:U,RefSeq:WP_005568303.1,SO:0001217,UniParc:UPI0001B9F2DB,UniRef:UniRef100_UPI0001B9F2DB,UniRef:UniRef50_UPI000A99AD90,UniRef:UniRef90_UPI000A99AD90 contig_1 Pyrodigal gene 223425 223727 . + . ID=GCA008085315_00212_gene;locus_tag=GCA008085315_00212 contig_1 Pyrodigal CDS 223425 223727 . + 0 ID=GCA008085315_00212;Name=TrbC/VIRB2 pilin;locus_tag=GCA008085315_00212;product=TrbC/VIRB2 pilin;Parent=GCA008085315_00212_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03197,RefSeq:WP_005558885.1,SO:0001217,UniParc:UPI0001B9F2DC,UniRef:UniRef100_G4AAH6,UniRef:UniRef50_G4AAH6,UniRef:UniRef90_G4AAH6 contig_1 Pyrodigal gene 223800 226352 . + . ID=GCA008085315_00213_gene;locus_tag=GCA008085315_00213;gene=virB4 contig_1 Pyrodigal CDS 223800 226352 . + 0 ID=GCA008085315_00213;Name=VirB4 family type IV secretion/conjugal transfer ATPase;locus_tag=GCA008085315_00213;product=VirB4 family type IV secretion/conjugal transfer ATPase;gene=virB4;Parent=GCA008085315_00213_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03199,RefSeq:WP_187370251.1,SO:0001217,UniParc:UPI001651C819,UniRef:UniRef100_UPI001651C819,UniRef:UniRef50_A0A1B9N1H2,UniRef:UniRef90_UPI002150F3A7;ec_number=7.4.2.8 contig_1 Pyrodigal gene 226469 227608 . - . ID=GCA008085315_00214_gene;locus_tag=GCA008085315_00214 contig_1 Pyrodigal CDS 226469 227608 . - 0 ID=GCA008085315_00214;Name=glutamate-5-semialdehyde dehydrogenase;locus_tag=GCA008085315_00214;product=glutamate-5-semialdehyde dehydrogenase;Dbxref=GO:0004350,GO:0006561,GO:0016620;Parent=GCA008085315_00214_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A1M3BDV6,UniRef:UniRef90_UPI001E3D6E77;ec_number=1.2.1.41 contig_1 Pyrodigal gene 227565 227717 . - . ID=GCA008085315_00215_gene;locus_tag=GCA008085315_00215 contig_1 Pyrodigal CDS 227565 227717 . - 0 ID=GCA008085315_00215;Name=hypothetical protein;locus_tag=GCA008085315_00215;product=hypothetical protein;Parent=GCA008085315_00215_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_162199513.1,SO:0001217,UniParc:UPI00138E3EDC,UniRef:UniRef100_UPI00138E3EDC,UniRef:UniRef50_UPI00138E3EDC,UniRef:UniRef90_UPI00138E3EDC contig_1 Pyrodigal gene 227737 228396 . - . ID=GCA008085315_00216_gene;locus_tag=GCA008085315_00216;gene=yadS contig_1 Pyrodigal CDS 227737 228396 . - 0 ID=GCA008085315_00216;Name=Glycine transporter domain-containing protein;locus_tag=GCA008085315_00216;product=Glycine transporter domain-containing protein;gene=yadS;Parent=GCA008085315_00216_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2860,COG:P,RefSeq:WP_148320654.1,SO:0001217,UniParc:UPI0011D45A5D,UniRef:UniRef100_UPI0011D45A5D,UniRef:UniRef50_P45122,UniRef:UniRef90_U1R5H1 contig_1 Pyrodigal gene 228532 229296 . + . ID=GCA008085315_00217_gene;locus_tag=GCA008085315_00217 contig_1 Pyrodigal CDS 228532 229296 . + 0 ID=GCA008085315_00217;Name=Gamma-glutamyl phosphate reductase;locus_tag=GCA008085315_00217;product=Gamma-glutamyl phosphate reductase;Parent=GCA008085315_00217_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148320656.1,SO:0001217,UniParc:UPI0011D8D67F,UniRef:UniRef100_UPI0011D8D67F,UniRef:UniRef50_E6KZ29,UniRef:UniRef90_A0A5D0ENW7 contig_1 Pyrodigal gene 229560 230567 . - . ID=GCA008085315_00218_gene;locus_tag=GCA008085315_00218;gene=fbp contig_1 Pyrodigal CDS 229560 230567 . - 0 ID=GCA008085315_00218;Name=class 1 fructose-bisphosphatase;locus_tag=GCA008085315_00218;product=class 1 fructose-bisphosphatase;Dbxref=GO:0000287,GO:0005829,GO:0005975,GO:0005986,GO:0006000,GO:0006002,GO:0006094,GO:0030388,GO:0042132;gene=fbp;Parent=GCA008085315_00218_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0158,COG:G,KEGG:K03841,RefSeq:WP_005541070.1,SO:0001217,UniParc:UPI0001B9F2E3,UniRef:UniRef100_A0A142FYM0,UniRef:UniRef50_Q2S1G3,UniRef:UniRef90_Q9CMA4;ec_number=3.1.3.11 contig_1 Pyrodigal gene 230725 232098 . + . ID=GCA008085315_00219_gene;locus_tag=GCA008085315_00219;gene=mpl contig_1 Pyrodigal CDS 230725 232098 . + 0 ID=GCA008085315_00219;Name=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;locus_tag=GCA008085315_00219;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;Dbxref=GO:0009252,GO:0016881,GO:0071555;gene=mpl;Parent=GCA008085315_00219_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0773,COG:M,RefSeq:WP_148320658.1,SO:0001217,UniParc:UPI0011DA202D,UniRef:UniRef100_UPI0011DA202D,UniRef:UniRef50_P37773,UniRef:UniRef90_E6KZ27;ec_number=6.3.2.45 contig_1 tRNAscan-SE gene 232161 232237 . - . ID=GCA008085315_00220_gene;locus_tag=GCA008085315_00220;gene=trnfM contig_1 tRNAscan-SE tRNA 232161 232237 . - . ID=GCA008085315_00220;Name=tRNA-fMet(cat);locus_tag=GCA008085315_00220;product=tRNA-fMet(cat);gene=trnfM;anti_codon=cat;amino_acid=fMet;Parent=GCA008085315_00220_gene;inference=profile:tRNAscan:2.0;Note=SO:0000266 contig_1 Pyrodigal gene 232478 233596 . + . ID=GCA008085315_00221_gene;locus_tag=GCA008085315_00221;gene=mltA contig_1 Pyrodigal CDS 232478 233596 . + 0 ID=GCA008085315_00221;Name=murein transglycosylase A;locus_tag=GCA008085315_00221;product=murein transglycosylase A;Dbxref=GO:0004553,GO:0009254,GO:0019867;gene=mltA;Parent=GCA008085315_00221_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2821,COG:M,KEGG:K08304,RefSeq:WP_005567357.1,SO:0001217,UniParc:UPI00022AC10D,UniRef:UniRef100_UPI00022AC10D,UniRef:UniRef50_F0EUI1,UniRef:UniRef90_A0A5D0ENY6;ec_number=4.2.2.29 contig_1 Pyrodigal gene 233596 234366 . + . ID=GCA008085315_00222_gene;locus_tag=GCA008085315_00222;gene=tcdA contig_1 Pyrodigal CDS 233596 234366 . + 0 ID=GCA008085315_00222;Name=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;locus_tag=GCA008085315_00222;product=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;Dbxref=GO:0008641;gene=tcdA;Parent=GCA008085315_00222_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1179,COG:J,RefSeq:WP_005548259.1,SO:0001217,UniParc:UPI0001B9F2E6,UniRef:UniRef100_UPI0001B9F2E6,UniRef:UniRef50_A0A0U5L8N7,UniRef:UniRef90_A0A5D0ENZ7 contig_1 Pyrodigal gene 234466 235485 . + . ID=GCA008085315_00223_gene;locus_tag=GCA008085315_00223;gene=znuA contig_1 Pyrodigal CDS 234466 235485 . + 0 ID=GCA008085315_00223;Name=zinc ABC transporter substrate-binding protein ZnuA;locus_tag=GCA008085315_00223;product=zinc ABC transporter substrate-binding protein ZnuA;Dbxref=GO:0006829,GO:0046872;gene=znuA;Parent=GCA008085315_00223_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4531,COG:P,RefSeq:WP_148320660.1,SO:0001217,UniParc:UPI0011DB87EE,UniRef:UniRef100_UPI0011DB87EE,UniRef:UniRef50_P44526,UniRef:UniRef90_A0A5D0ENV9;ec_number=7.2.2.- contig_1 Pyrodigal gene 235613 236425 . + . ID=GCA008085315_00224_gene;locus_tag=GCA008085315_00224 contig_1 Pyrodigal CDS 235613 236425 . + 0 ID=GCA008085315_00224;Name=5'-nucleotidase%2C lipoprotein e(P4) family;locus_tag=GCA008085315_00224;product=5'-nucleotidase%2C lipoprotein e(P4) family;Dbxref=GO:0009279;Parent=GCA008085315_00224_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2503,COG:R,RefSeq:WP_005588717.1,SO:0001217,UniParc:UPI0001B9F2E8,UniRef:UniRef100_UPI0001B9F2E8,UniRef:UniRef50_P26093,UniRef:UniRef90_E6KZ23 contig_1 Pyrodigal gene 236505 236996 . - . ID=GCA008085315_00225_gene;locus_tag=GCA008085315_00225;gene=yajQ contig_1 Pyrodigal CDS 236505 236996 . - 0 ID=GCA008085315_00225;Name=YajQ family cyclic di-GMP-binding protein;locus_tag=GCA008085315_00225;product=YajQ family cyclic di-GMP-binding protein;gene=yajQ;Parent=GCA008085315_00225_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1666,COG:T,RefSeq:WP_005548266.1,SO:0001217,UniParc:UPI0001B9F2E9,UniRef:UniRef100_UPI0001B9F2E9,UniRef:UniRef50_Q8ZC52,UniRef:UniRef90_E6KZ54 contig_1 Pyrodigal gene 237007 237951 . - . ID=GCA008085315_00226_gene;locus_tag=GCA008085315_00226;gene=serB contig_1 Pyrodigal CDS 237007 237951 . - 0 ID=GCA008085315_00226;Name=phosphoserine phosphatase;locus_tag=GCA008085315_00226;product=phosphoserine phosphatase;Dbxref=GO:0006564,GO:0036424;gene=serB;Parent=GCA008085315_00226_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0560,COG:E,KEGG:K01079,RefSeq:WP_005548268.1,SO:0001217,UniParc:UPI0001B9F2EA,UniRef:UniRef100_UPI0001B9F2EA,UniRef:UniRef50_P44997,UniRef:UniRef90_E6KZ53;ec_number=3.1.3.3 contig_1 Pyrodigal gene 238060 238704 . + . ID=GCA008085315_00227_gene;locus_tag=GCA008085315_00227;gene=ahpA contig_1 Pyrodigal CDS 238060 238704 . + 0 ID=GCA008085315_00227;Name=Hemolysin regulation protein AhpA;locus_tag=GCA008085315_00227;product=Hemolysin regulation protein AhpA;gene=ahpA;Parent=GCA008085315_00227_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3726,COG:S,KEGG:K07186,SO:0001217,UniRef:UniRef50_Q9L8J3,UniRef:UniRef90_A0A142FZ43 contig_1 Pyrodigal gene 238814 239077 . - . ID=GCA008085315_00228_gene;locus_tag=GCA008085315_00228;gene=rpsT contig_1 Pyrodigal CDS 238814 239077 . - 0 ID=GCA008085315_00228;Name=30S ribosomal protein S20;locus_tag=GCA008085315_00228;product=30S ribosomal protein S20;Dbxref=GO:0003723,GO:0003735,GO:0005829,GO:0005840,GO:0006412,GO:0015935,GO:0070181;gene=rpsT;Parent=GCA008085315_00228_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0268,COG:J,KEGG:K02968,RefSeq:WP_005548279.1,SO:0001217,UniParc:UPI0001AAE0AF,UniRef:UniRef100_A0A1V3ISG3,UniRef:UniRef50_P0A7U7,UniRef:UniRef90_P44959 contig_1 Pyrodigal gene 239345 240922 . + . ID=GCA008085315_00229_gene;locus_tag=GCA008085315_00229;gene=murJ contig_1 Pyrodigal CDS 239345 240922 . + 0 ID=GCA008085315_00229;Name=murein biosynthesis integral membrane protein MurJ;locus_tag=GCA008085315_00229;product=murein biosynthesis integral membrane protein MurJ;Dbxref=GO:0009252,GO:0034204;gene=murJ;Parent=GCA008085315_00229_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0728,COG:M,KEGG:K03980,RefSeq:WP_148333946.1,SO:0001217,UniParc:UPI0011D4FECD,UniRef:UniRef100_UPI0011D4FECD,UniRef:UniRef50_P44958,UniRef:UniRef90_E6KZ50 contig_1 Pyrodigal gene 241000 241926 . + . ID=GCA008085315_00230_gene;locus_tag=GCA008085315_00230;gene=ribF contig_1 Pyrodigal CDS 241000 241926 . + 0 ID=GCA008085315_00230;Name=bifunctional riboflavin kinase/FAD synthetase;locus_tag=GCA008085315_00230;product=bifunctional riboflavin kinase/FAD synthetase;Dbxref=GO:0003919;gene=ribF;Parent=GCA008085315_00230_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0196,COG:H,KEGG:K11753,RefSeq:WP_148320666.1,SO:0001217,UniParc:UPI0011D77AA5,UniRef:UniRef100_UPI0011D77AA5,UniRef:UniRef50_A3MYB7,UniRef:UniRef90_E6KZ49;ec_number=2.7.7.2 contig_1 Pyrodigal gene 242342 245164 . + . ID=GCA008085315_00231_gene;locus_tag=GCA008085315_00231;gene=ileS contig_1 Pyrodigal CDS 242342 245164 . + 0 ID=GCA008085315_00231;Name=isoleucine--tRNA ligase;locus_tag=GCA008085315_00231;product=isoleucine--tRNA ligase;Dbxref=GO:0000049,GO:0000166,GO:0002161,GO:0004822,GO:0005524,GO:0005829,GO:0006428,GO:0008270;gene=ileS;Parent=GCA008085315_00231_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0060,COG:J,RefSeq:WP_148320668.1,SO:0001217,UniParc:UPI0011D39148,UniRef:UniRef100_UPI0011D39148,UniRef:UniRef50_P00956,UniRef:UniRef90_P43824;ec_number=6.1.1.5 contig_1 Pyrodigal gene 245244 245738 . + . ID=GCA008085315_00232_gene;locus_tag=GCA008085315_00232;gene=lspA contig_1 Pyrodigal CDS 245244 245738 . + 0 ID=GCA008085315_00232;Name=signal peptidase II;locus_tag=GCA008085315_00232;product=signal peptidase II;Dbxref=GO:0004190,GO:0005886,GO:0006508,GO:0009306;gene=lspA;Parent=GCA008085315_00232_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0597,COG:MU,KEGG:K03101,RefSeq:WP_005538058.1,SO:0001217,UniParc:UPI0001CA7AD0,UniRef:UniRef100_A0A142FZ36,UniRef:UniRef50_P44975,UniRef:UniRef90_A0A142FZ36;ec_number=3.4.23.36 contig_1 Pyrodigal gene 245738 246682 . + . ID=GCA008085315_00233_gene;locus_tag=GCA008085315_00233;gene=ispH contig_1 Pyrodigal CDS 245738 246682 . + 0 ID=GCA008085315_00233;Name=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;locus_tag=GCA008085315_00233;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;Dbxref=GO:0016114,GO:0019288,GO:0046872,GO:0050992,GO:0051539,GO:0051745;gene=ispH;Parent=GCA008085315_00233_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0761,COG:I,KEGG:K03527,RefSeq:WP_005548289.1,SO:0001217,UniParc:UPI00022AD39F,UniRef:UniRef100_UPI00022AD39F,UniRef:UniRef50_P62623,UniRef:UniRef90_P44976;ec_number=1.17.7.4 contig_1 Pyrodigal gene 247147 248445 . - . ID=GCA008085315_00234_gene;locus_tag=GCA008085315_00234;gene=tig contig_1 Pyrodigal CDS 247147 248445 . - 0 ID=GCA008085315_00234;Name=trigger factor;locus_tag=GCA008085315_00234;product=trigger factor;Dbxref=GO:0003755,GO:0005854,GO:0015031,GO:0051082,GO:0051083;gene=tig;Parent=GCA008085315_00234_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0544,COG:O,RefSeq:WP_148320670.1,SO:0001217,UniParc:UPI0011D5FD7A,UniRef:UniRef100_UPI0011D5FD7A,UniRef:UniRef50_P0A850,UniRef:UniRef90_A0A142FYR4;ec_number=5.2.1.8 contig_1 Pyrodigal gene 248609 249502 . - . ID=GCA008085315_00235_gene;locus_tag=GCA008085315_00235;gene=xerD contig_1 Pyrodigal CDS 248609 249502 . - 0 ID=GCA008085315_00235;Name=site-specific tyrosine recombinase XerD;locus_tag=GCA008085315_00235;product=site-specific tyrosine recombinase XerD;Dbxref=GO:0006310,GO:0009009;gene=xerD;Parent=GCA008085315_00235_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4974,COG:L,RefSeq:WP_005548293.1,SO:0001217,UniParc:UPI0001B9F2F4,UniRef:UniRef100_UPI0001B9F2F4,UniRef:UniRef50_P0A8P8,UniRef:UniRef90_E6KW75 contig_1 Pyrodigal gene 249505 250665 . - . ID=GCA008085315_00236_gene;locus_tag=GCA008085315_00236 contig_1 Pyrodigal CDS 249505 250665 . - 0 ID=GCA008085315_00236;Name=3-phenylpropionate MFS transporter;locus_tag=GCA008085315_00236;product=3-phenylpropionate MFS transporter;Parent=GCA008085315_00236_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K05820,RefSeq:WP_005548295.1,SO:0001217,UniParc:UPI0001B9F2F5,UniRef:UniRef100_UPI0001B9F2F5,UniRef:UniRef50_P44629,UniRef:UniRef90_G4AAF2 contig_1 Pyrodigal gene 250665 250904 . - . ID=GCA008085315_00237_gene;locus_tag=GCA008085315_00237 contig_1 Pyrodigal CDS 250665 250904 . - 0 ID=GCA008085315_00237;Name=pyrroline-5-carboxylate reductase dimerization domain-containing protein;locus_tag=GCA008085315_00237;product=pyrroline-5-carboxylate reductase dimerization domain-containing protein;Parent=GCA008085315_00237_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_UPI0027D27B1C contig_1 Pyrodigal gene 250910 251368 . - . ID=GCA008085315_00238_gene;locus_tag=GCA008085315_00238 contig_1 Pyrodigal CDS 250910 251368 . - 0 ID=GCA008085315_00238;Name=hypothetical protein;locus_tag=GCA008085315_00238;product=hypothetical protein;Parent=GCA008085315_00238_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=PFAM:PF03446.21 contig_1 Pyrodigal gene 251431 252336 . + . ID=GCA008085315_00239_gene;locus_tag=GCA008085315_00239;gene=rdgC contig_1 Pyrodigal CDS 251431 252336 . + 0 ID=GCA008085315_00239;Name=recombination-associated protein RdgC;locus_tag=GCA008085315_00239;product=recombination-associated protein RdgC;Dbxref=GO:0006310;gene=rdgC;Parent=GCA008085315_00239_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2974,COG:L,KEGG:K03554,RefSeq:WP_148333947.1,SO:0001217,UniParc:UPI0011D683EB,UniRef:UniRef100_UPI0011D683EB,UniRef:UniRef50_P44628,UniRef:UniRef90_A0A5D0ENT9 contig_1 Pyrodigal gene 252427 252801 . - . ID=GCA008085315_00240_gene;locus_tag=GCA008085315_00240;gene=oapB contig_1 Pyrodigal CDS 252427 252801 . - 0 ID=GCA008085315_00240;Name=Opacity-associated protein OapB;locus_tag=GCA008085315_00240;product=Opacity-associated protein OapB;gene=oapB;Parent=GCA008085315_00240_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_019518420.1,SO:0001217,UniParc:UPI0003499A3F,UniRef:UniRef100_UPI0003499A3F,UniRef:UniRef50_P44416,UniRef:UniRef90_G4AAE8 contig_1 Pyrodigal gene 252863 254176 . - . ID=GCA008085315_00241_gene;locus_tag=GCA008085315_00241;gene=oapA contig_1 Pyrodigal CDS 252863 254176 . - 0 ID=GCA008085315_00241;Name=opacity-associated protein OapA;locus_tag=GCA008085315_00241;product=opacity-associated protein OapA;Dbxref=GO:0042834;gene=oapA;Parent=GCA008085315_00241_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3061,COG:D,KEGG:K07268,RefSeq:WP_148320672.1,SO:0001217,UniParc:UPI0011D618EA,UniRef:UniRef100_UPI0011D618EA,UniRef:UniRef50_A0A2M8RVZ0,UniRef:UniRef90_UPI00077EA510 contig_1 Pyrodigal gene 254347 255366 . - . ID=GCA008085315_00242_gene;locus_tag=GCA008085315_00242;gene=epmB contig_1 Pyrodigal CDS 254347 255366 . - 0 ID=GCA008085315_00242;Name=EF-P beta-lysylation protein EpmB;locus_tag=GCA008085315_00242;product=EF-P beta-lysylation protein EpmB;gene=epmB;Parent=GCA008085315_00242_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1509,COG:E,KEGG:K19810,RefSeq:WP_187374050.1,SO:0001217,UniParc:UPI001651ED81,UniRef:UniRef100_UPI001651ED81,UniRef:UniRef50_P39280,UniRef:UniRef90_A0A5D0ENR8;ec_number=5.4.3.- contig_1 Pyrodigal gene 255398 255964 . + . ID=GCA008085315_00243_gene;locus_tag=GCA008085315_00243;gene=efp contig_1 Pyrodigal CDS 255398 255964 . + 0 ID=GCA008085315_00243;Name=elongation factor P;locus_tag=GCA008085315_00243;product=elongation factor P;Dbxref=GO:0003746,GO:0005737,GO:0006414,GO:0043043;gene=efp;Parent=GCA008085315_00243_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0231,COG:J,KEGG:K02356,RefSeq:WP_005544066.1,SO:0001217,UniParc:UPI000016859A,UniRef:UniRef100_P43771,UniRef:UniRef50_P0A6N4,UniRef:UniRef90_P43771 contig_1 Pyrodigal gene 256294 257670 . + . ID=GCA008085315_00244_gene;locus_tag=GCA008085315_00244;gene=tnaA contig_1 Pyrodigal CDS 256294 257670 . + 0 ID=GCA008085315_00244;Name=tyrosine phenol-lyase;locus_tag=GCA008085315_00244;product=tyrosine phenol-lyase;Dbxref=GO:0006570,GO:0050371;gene=tnaA;Parent=GCA008085315_00244_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3033,COG:E,RefSeq:WP_005548314.1,SO:0001217,UniParc:UPI0001B9F2FD,UniRef:UniRef100_UPI0001B9F2FD,UniRef:UniRef50_Q08897,UniRef:UniRef90_F0EQW4;ec_number=4.1.99.2 contig_1 Pyrodigal gene 257832 259046 . + . ID=GCA008085315_00245_gene;locus_tag=GCA008085315_00245;gene=sdaC contig_1 Pyrodigal CDS 257832 259046 . + 0 ID=GCA008085315_00245;Name=Aromatic amino acid permease;locus_tag=GCA008085315_00245;product=Aromatic amino acid permease;gene=sdaC;Parent=GCA008085315_00245_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0814,COG:E,KEGG:K03834,RefSeq:WP_148320675.1,SO:0001217,UniParc:UPI0011D9A178,UniRef:UniRef100_UPI0011D9A178,UniRef:UniRef50_P44747,UniRef:UniRef90_A0A5D0DIX2 contig_1 Pyrodigal gene 259112 259789 . - . ID=GCA008085315_00246_gene;locus_tag=GCA008085315_00246;gene=yheO contig_1 Pyrodigal CDS 259112 259789 . - 0 ID=GCA008085315_00246;Name=DNA-binding protein;locus_tag=GCA008085315_00246;product=DNA-binding protein;gene=yheO;Parent=GCA008085315_00246_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2964,COG:K,RefSeq:WP_005544072.1,SO:0001217,UniParc:UPI0001B9F369,UniRef:UniRef100_A0A5D0ENR7,UniRef:UniRef50_A0A828QVG4,UniRef:UniRef90_A0A5D0ENR7 contig_1 Pyrodigal gene 259852 260358 . - . ID=GCA008085315_00247_gene;locus_tag=GCA008085315_00247 contig_1 Pyrodigal CDS 259852 260358 . - 0 ID=GCA008085315_00247;Name=Integral membrane protein;locus_tag=GCA008085315_00247;product=Integral membrane protein;Parent=GCA008085315_00247_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5413,COG:S,RefSeq:WP_005547189.1,SO:0001217,UniParc:UPI0001B9F36A,UniRef:UniRef100_UPI0001B9F36A,UniRef:UniRef50_P43947,UniRef:UniRef90_A0A5D0ENS8 contig_1 Pyrodigal gene 260351 261082 . - . ID=GCA008085315_00248_gene;locus_tag=GCA008085315_00248;gene=lpxH contig_1 Pyrodigal CDS 260351 261082 . - 0 ID=GCA008085315_00248;Name=UDP-2%2C3-diacylglucosamine diphosphatase;locus_tag=GCA008085315_00248;product=UDP-2%2C3-diacylglucosamine diphosphatase;Dbxref=GO:0005737,GO:0008758,GO:0009245,GO:0016462;gene=lpxH;Parent=GCA008085315_00248_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2908,COG:M,KEGG:K03269,RefSeq:WP_005547190.1,SO:0001217,UniParc:UPI0001B9F36B,UniRef:UniRef100_UPI0001B9F36B,UniRef:UniRef50_C4LG06,UniRef:UniRef90_A0A142FYS5;ec_number=3.6.1.54 contig_1 Pyrodigal gene 261193 261936 . + . ID=GCA008085315_00249_gene;locus_tag=GCA008085315_00249;gene=plsC contig_1 Pyrodigal CDS 261193 261936 . + 0 ID=GCA008085315_00249;Name=1-acyl-sn-glycerol-3-phosphate acyltransferase;locus_tag=GCA008085315_00249;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;gene=plsC;Parent=GCA008085315_00249_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0204,COG:I,RefSeq:WP_148320677.1,SO:0001217,UniParc:UPI0011D5120D,UniRef:UniRef100_UPI0011D5120D,UniRef:UniRef50_P26647,UniRef:UniRef90_A0A5D0ENS9 contig_1 Pyrodigal gene 261944 263356 . + . ID=GCA008085315_00250_gene;locus_tag=GCA008085315_00250;gene=sufI contig_1 Pyrodigal CDS 261944 263356 . + 0 ID=GCA008085315_00250;Name=Cell division protein FtsP;locus_tag=GCA008085315_00250;product=Cell division protein FtsP;gene=sufI;Parent=GCA008085315_00250_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2132,COG:DPM,KEGG:K04753,RefSeq:WP_148333949.1,SO:0001217,UniParc:UPI0011D8FC51,UniRef:UniRef100_UPI0011D8FC51,UniRef:UniRef50_Q9CPE1,UniRef:UniRef90_A0A5D0ENQ1 contig_1 Pyrodigal gene 263427 264290 . - . ID=GCA008085315_00251_gene;locus_tag=GCA008085315_00251;gene=rhaT contig_1 Pyrodigal CDS 263427 264290 . - 0 ID=GCA008085315_00251;Name=Ribosomal protein L11 methyltransferase;locus_tag=GCA008085315_00251;product=Ribosomal protein L11 methyltransferase;gene=rhaT;Parent=GCA008085315_00251_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0697,COG:GER,RefSeq:WP_005547195.1,SO:0001217,UniParc:UPI0001B9F36E,UniRef:UniRef100_UPI0001B9F36E,UniRef:UniRef50_O86230,UniRef:UniRef90_G4AAD7 contig_1 Pyrodigal gene 264432 265172 . - . ID=GCA008085315_00252_gene;locus_tag=GCA008085315_00252;gene=pflA contig_1 Pyrodigal CDS 264432 265172 . - 0 ID=GCA008085315_00252;Name=pyruvate formate lyase 1-activating protein;locus_tag=GCA008085315_00252;product=pyruvate formate lyase 1-activating protein;Dbxref=GO:0043365,GO:0051539;gene=pflA;Parent=GCA008085315_00252_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1180,COG:O,RefSeq:WP_005547197.1,SO:0001217,UniParc:UPI0001B9F36F,UniRef:UniRef100_UPI0001B9F36F,UniRef:UniRef50_P0A9N4,UniRef:UniRef90_E6KZF1;ec_number=1.97.1.4 contig_1 Pyrodigal gene 265317 267629 . - . ID=GCA008085315_00253_gene;locus_tag=GCA008085315_00253;gene=pflB contig_1 Pyrodigal CDS 265317 267629 . - 0 ID=GCA008085315_00253;Name=formate C-acetyltransferase;locus_tag=GCA008085315_00253;product=formate C-acetyltransferase;Dbxref=GO:0005737,GO:0005975,GO:0008861;gene=pflB;Parent=GCA008085315_00253_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1882,KEGG:K00656,RefSeq:WP_005566462.1,SO:0001217,UniParc:UPI0001B9F370,UniRef:UniRef100_UPI0001B9F370,UniRef:UniRef50_P09373,UniRef:UniRef90_B0BPX5;ec_number=2.3.1.54 contig_1 Pyrodigal gene 267728 268579 . - . ID=GCA008085315_00254_gene;locus_tag=GCA008085315_00254;gene=focA contig_1 Pyrodigal CDS 267728 268579 . - 0 ID=GCA008085315_00254;Name=formate transporter FocA;locus_tag=GCA008085315_00254;product=formate transporter FocA;Dbxref=GO:0005886,GO:0015499,GO:0015724;gene=focA;Parent=GCA008085315_00254_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2116,COG:P,KEGG:K06212,RefSeq:WP_014167403.1,SO:0001217,UniParc:UPI00022BFFF9,UniRef:UniRef100_UPI00022BFFF9,UniRef:UniRef50_D2TZM8,UniRef:UniRef90_A0A142FYT1 contig_1 Pyrodigal gene 268892 269242 . + . ID=GCA008085315_00255_gene;locus_tag=GCA008085315_00255;gene=hinT contig_1 Pyrodigal CDS 268892 269242 . + 0 ID=GCA008085315_00255;Name=purine nucleoside phosphoramidase;locus_tag=GCA008085315_00255;product=purine nucleoside phosphoramidase;Dbxref=GO:0000166,GO:0005737,GO:0005829,GO:0043530,GO:0055130;gene=hinT;Parent=GCA008085315_00255_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0537,COG:FR,RefSeq:WP_005547206.1,SO:0001217,UniParc:UPI0001B9F372,UniRef:UniRef100_UPI0001B9F372,UniRef:UniRef50_P0ACE7,UniRef:UniRef90_P44956;ec_number=3.9.1.- contig_1 Pyrodigal gene 269243 269596 . + . ID=GCA008085315_00256_gene;locus_tag=GCA008085315_00256;gene=ycfL contig_1 Pyrodigal CDS 269243 269596 . + 0 ID=GCA008085315_00256;Name=DUF1425 domain-containing protein;locus_tag=GCA008085315_00256;product=DUF1425 domain-containing protein;gene=ycfL;Parent=GCA008085315_00256_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5633,COG:S,RefSeq:WP_005547208.1,SO:0001217,UniParc:UPI0001B9F373,UniRef:UniRef100_UPI0001B9F373,UniRef:UniRef50_E6KZE7,UniRef:UniRef90_A0A5D0ENQ8 contig_1 Pyrodigal gene 269598 270644 . + . ID=GCA008085315_00257_gene;locus_tag=GCA008085315_00257;gene=nagZ contig_1 Pyrodigal CDS 269598 270644 . + 0 ID=GCA008085315_00257;Name=beta-N-acetylhexosaminidase;locus_tag=GCA008085315_00257;product=beta-N-acetylhexosaminidase;Dbxref=GO:0004553,GO:0005975;gene=nagZ;Parent=GCA008085315_00257_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1472,COG:G,RefSeq:WP_148320679.1,SO:0001217,UniParc:UPI0011D64DF6,UniRef:UniRef100_UPI0011D64DF6,UniRef:UniRef50_B2VDM3,UniRef:UniRef90_A0A142FYT4;ec_number=3.2.1.52 contig_1 Pyrodigal gene 270646 271206 . + . ID=GCA008085315_00258_gene;locus_tag=GCA008085315_00258 contig_1 Pyrodigal CDS 270646 271206 . + 0 ID=GCA008085315_00258;Name=23S rRNA (Uracil-5-)-methyltransferase;locus_tag=GCA008085315_00258;product=23S rRNA (Uracil-5-)-methyltransferase;Parent=GCA008085315_00258_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A376P4Q2 contig_1 Pyrodigal gene 271326 271823 . + . ID=GCA008085315_00259_gene;locus_tag=GCA008085315_00259 contig_1 Pyrodigal CDS 271326 271823 . + 0 ID=GCA008085315_00259;Name=methyltransferase domain-containing protein;locus_tag=GCA008085315_00259;product=methyltransferase domain-containing protein;Parent=GCA008085315_00259_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_UPI0028DBEBDF contig_1 Pyrodigal gene 271923 272888 . - . ID=GCA008085315_00260_gene;locus_tag=GCA008085315_00260;gene=pfkA contig_1 Pyrodigal CDS 271923 272888 . - 0 ID=GCA008085315_00260;Name=6-phosphofructokinase;locus_tag=GCA008085315_00260;product=6-phosphofructokinase;Dbxref=GO:0003872,GO:0005524,GO:0005945,GO:0006002,GO:0006096,GO:0016208,GO:0030388,GO:0042802,GO:0046872,GO:0048029,GO:0061621,GO:0070095;gene=pfkA;Parent=GCA008085315_00260_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0205,COG:G,RefSeq:WP_005566468.1,SO:0001217,UniParc:UPI00022AC4F9,UniRef:UniRef100_UPI00022AC4F9,UniRef:UniRef50_O34529,UniRef:UniRef90_Q9CPH2;ec_number=2.7.1.11 contig_1 Pyrodigal gene 272950 273870 . - . ID=GCA008085315_00261_gene;locus_tag=GCA008085315_00261 contig_1 Pyrodigal CDS 272950 273870 . - 0 ID=GCA008085315_00261;Name=Cation diffusion facilitator family transporter;locus_tag=GCA008085315_00261;product=Cation diffusion facilitator family transporter;Parent=GCA008085315_00261_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K13283,RefSeq:WP_148320680.1,SO:0001217,UniParc:UPI0011DC69F8,UniRef:UniRef100_UPI0011DC69F8,UniRef:UniRef50_A0A1G4Z7J4,UniRef:UniRef90_A0A5D0ENS0 contig_1 Pyrodigal gene 273870 274436 . - . ID=GCA008085315_00262_gene;locus_tag=GCA008085315_00262 contig_1 Pyrodigal CDS 273870 274436 . - 0 ID=GCA008085315_00262;Name=6-phosphofructokinase;locus_tag=GCA008085315_00262;product=6-phosphofructokinase;Parent=GCA008085315_00262_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005547219.1,SO:0001217,UniParc:UPI0001B9F379,UniRef:UniRef100_A0A142FYT7,UniRef:UniRef50_A0A142FYT7,UniRef:UniRef90_A0A142FYT7 contig_1 Pyrodigal gene 274438 275217 . - . ID=GCA008085315_00263_gene;locus_tag=GCA008085315_00263;gene=yaaA contig_1 Pyrodigal CDS 274438 275217 . - 0 ID=GCA008085315_00263;Name=peroxide stress protein YaaA;locus_tag=GCA008085315_00263;product=peroxide stress protein YaaA;gene=yaaA;Parent=GCA008085315_00263_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3022,COG:L,KEGG:K09861,RefSeq:WP_005547221.1,SO:0001217,UniParc:UPI0001B9F37A,UniRef:UniRef100_UPI0001B9F37A,UniRef:UniRef50_Q6FA99,UniRef:UniRef90_A0A5D0ENN8 contig_1 Pyrodigal gene 275239 275907 . - . ID=GCA008085315_00264_gene;locus_tag=GCA008085315_00264;gene=ung contig_1 Pyrodigal CDS 275239 275907 . - 0 ID=GCA008085315_00264;Name=uracil-DNA glycosylase;locus_tag=GCA008085315_00264;product=uracil-DNA glycosylase;Dbxref=GO:0004844,GO:0006284,GO:0016799;gene=ung;Parent=GCA008085315_00264_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0692,COG:L,KEGG:K03648,RefSeq:WP_005547222.1,SO:0001217,UniParc:UPI0001B9F37B,UniRef:UniRef100_UPI0001B9F37B,UniRef:UniRef50_Q8R634,UniRef:UniRef90_A0A5D0ENP6;ec_number=3.2.2.27 contig_1 Pyrodigal gene 276193 276576 . + . ID=GCA008085315_00265_gene;locus_tag=GCA008085315_00265;gene=grcA contig_1 Pyrodigal CDS 276193 276576 . + 0 ID=GCA008085315_00265;Name=autonomous glycyl radical cofactor GrcA;locus_tag=GCA008085315_00265;product=autonomous glycyl radical cofactor GrcA;Dbxref=GO:0003824,GO:0005829,GO:0008861;gene=grcA;Parent=GCA008085315_00265_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3445,COG:H,RefSeq:WP_005539658.1,SO:0001217,UniParc:UPI0001B9F37C,UniRef:UniRef100_A0A142FYU0,UniRef:UniRef50_Q9CPH6,UniRef:UniRef90_Q9CPH6 contig_1 Pyrodigal gene 276740 278536 . + . ID=GCA008085315_00266_gene;locus_tag=GCA008085315_00266;gene=lepA contig_1 Pyrodigal CDS 276740 278536 . + 0 ID=GCA008085315_00266;Name=translation elongation factor 4;locus_tag=GCA008085315_00266;product=translation elongation factor 4;Dbxref=GO:0003746,GO:0003924,GO:0005525,GO:0005886,GO:0043022,GO:0045727,GO:0097216,GO:1990606;gene=lepA;Parent=GCA008085315_00266_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0481,COG:J,RefSeq:WP_005547224.1,SO:0001217,UniParc:UPI0001B9F37D,UniRef:UniRef100_UPI0001B9F37D,UniRef:UniRef50_Q83BK3,UniRef:UniRef90_Q7VL73;ec_number=3.6.5.n1 contig_1 Pyrodigal gene 278547 279569 . + . ID=GCA008085315_00267_gene;locus_tag=GCA008085315_00267;gene=lepB contig_1 Pyrodigal CDS 278547 279569 . + 0 ID=GCA008085315_00267;Name=signal peptidase I;locus_tag=GCA008085315_00267;product=signal peptidase I;Dbxref=GO:0004252,GO:0006465;gene=lepB;Parent=GCA008085315_00267_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0681,COG:U,KEGG:K03100,RefSeq:WP_005547226.1,SO:0001217,UniParc:UPI0001B9F37E,UniRef:UniRef100_UPI0001B9F37E,UniRef:UniRef50_P44454,UniRef:UniRef90_A0A5D0ENP0;ec_number=3.4.21.89 contig_1 Pyrodigal gene 279576 280256 . + . ID=GCA008085315_00268_gene;locus_tag=GCA008085315_00268;gene=rnc contig_1 Pyrodigal CDS 279576 280256 . + 0 ID=GCA008085315_00268;Name=ribonuclease III;locus_tag=GCA008085315_00268;product=ribonuclease III;Dbxref=GO:0003723,GO:0004525,GO:0006364,GO:0006396;gene=rnc;Parent=GCA008085315_00268_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0571,COG:K,RefSeq:WP_005539664.1,SO:0001217,UniParc:UPI0001CA738B,UniRef:UniRef100_A0A5D0ENP7,UniRef:UniRef50_P57805,UniRef:UniRef90_A0A5D0ENP7;ec_number=3.1.26.3 contig_1 Pyrodigal gene 280253 281161 . + . ID=GCA008085315_00269_gene;locus_tag=GCA008085315_00269;gene=era contig_1 Pyrodigal CDS 280253 281161 . + 0 ID=GCA008085315_00269;Name=GTPase Era;locus_tag=GCA008085315_00269;product=GTPase Era;Dbxref=GO:0003723,GO:0005525;gene=era;Parent=GCA008085315_00269_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1159,COG:J,RefSeq:WP_005575646.1,SO:0001217,UniParc:UPI0001B9F380,UniRef:UniRef100_UPI0001B9F380,UniRef:UniRef50_P06616,UniRef:UniRef90_A0A142FYU4;ec_number=3.6.5.- contig_1 Pyrodigal gene 281265 282620 . - . ID=GCA008085315_00270_gene;locus_tag=GCA008085315_00270;gene=mnmE contig_1 Pyrodigal CDS 281265 282620 . - 0 ID=GCA008085315_00270;Name=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;locus_tag=GCA008085315_00270;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;Dbxref=GO:0003924,GO:0005515,GO:0005525,GO:0006400;gene=mnmE;Parent=GCA008085315_00270_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0486,COG:J,RefSeq:WP_148333950.1,SO:0001217,UniParc:UPI0011D8208B,UniRef:UniRef100_UPI0011D8208B,UniRef:UniRef50_P43730,UniRef:UniRef90_A0A142FYU5;ec_number=3.6.-.- contig_1 Pyrodigal gene 282748 284379 . - . ID=GCA008085315_00271_gene;locus_tag=GCA008085315_00271;gene=yidC contig_1 Pyrodigal CDS 282748 284379 . - 0 ID=GCA008085315_00271;Name=membrane protein insertase YidC;locus_tag=GCA008085315_00271;product=membrane protein insertase YidC;Dbxref=GO:0016020,GO:0032977;gene=yidC;Parent=GCA008085315_00271_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0706,COG:M,KEGG:K03217,RefSeq:WP_005589573.1,SO:0001217,UniParc:UPI0002AC4892,UniRef:UniRef100_UPI0002AC4892,UniRef:UniRef50_B6EP40,UniRef:UniRef90_E6KZB8 contig_1 Pyrodigal gene 284379 284642 . - . ID=GCA008085315_00272_gene;locus_tag=GCA008085315_00272;gene=yidD contig_1 Pyrodigal CDS 284379 284642 . - 0 ID=GCA008085315_00272;Name=membrane protein insertion efficiency factor YidD;locus_tag=GCA008085315_00272;product=membrane protein insertion efficiency factor YidD;gene=yidD;Parent=GCA008085315_00272_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0759,COG:M,KEGG:K08998,RefSeq:WP_148333951.1,SO:0001217,UniParc:UPI0011D44DAA,UniRef:UniRef100_UPI0011D44DAA,UniRef:UniRef50_A0A263JB24,UniRef:UniRef90_A0A5D0L272 contig_1 Pyrodigal gene 284597 284932 . - . ID=GCA008085315_00273_gene;locus_tag=GCA008085315_00273;gene=rnpA contig_1 Pyrodigal CDS 284597 284932 . - 0 ID=GCA008085315_00273;Name=ribonuclease P protein component;locus_tag=GCA008085315_00273;product=ribonuclease P protein component;Dbxref=GO:0000049,GO:0004526,GO:0008033;gene=rnpA;Parent=GCA008085315_00273_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0594,COG:J,SO:0001217,UniRef:UniRef50_P0A7Y8,UniRef:UniRef90_A0A142FYU7;ec_number=3.1.26.5 contig_1 Pyrodigal gene 284978 285112 . - . ID=GCA008085315_00274_gene;locus_tag=GCA008085315_00274;gene=rpmH contig_1 Pyrodigal CDS 284978 285112 . - 0 ID=GCA008085315_00274;Name=50S ribosomal protein L34;locus_tag=GCA008085315_00274;product=50S ribosomal protein L34;Dbxref=GO:0000315,GO:0003735,GO:0005840,GO:0006412,GO:0022625,GO:1990904;gene=rpmH;Parent=GCA008085315_00274_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0230,COG:J,KEGG:K02914,RefSeq:WP_005539760.1,SO:0001217,UniParc:UPI0000133FAE,UniRef:UniRef100_P66244,UniRef:UniRef50_P66248,UniRef:UniRef90_A3N3N0 contig_1 Pyrodigal gene 285530 286891 . + . ID=GCA008085315_00275_gene;locus_tag=GCA008085315_00275;gene=dnaA contig_1 Pyrodigal CDS 285530 286891 . + 0 ID=GCA008085315_00275;Name=chromosomal replication initiator protein DnaA;locus_tag=GCA008085315_00275;product=chromosomal replication initiator protein DnaA;Dbxref=GO:0003677,GO:0003688,GO:0005524,GO:0006270,GO:0006275;gene=dnaA;Parent=GCA008085315_00275_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0593,COG:L,KEGG:K02313,RefSeq:WP_005547242.1,SO:0001217,UniParc:UPI0001B9F386,UniRef:UniRef100_UPI0001B9F386,UniRef:UniRef50_Q82Y84,UniRef:UniRef90_E6KZC2 contig_1 Pyrodigal gene 286902 288002 . + . ID=GCA008085315_00276_gene;locus_tag=GCA008085315_00276;gene=dnaN contig_1 Pyrodigal CDS 286902 288002 . + 0 ID=GCA008085315_00276;Name=DNA polymerase III subunit beta;locus_tag=GCA008085315_00276;product=DNA polymerase III subunit beta;Dbxref=GO:0003677,GO:0003887,GO:0006260,GO:0009360;gene=dnaN;Parent=GCA008085315_00276_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0592,COG:L,KEGG:K02338,RefSeq:WP_005589012.1,SO:0001217,UniParc:UPI00022C0071,UniRef:UniRef100_UPI00022C0071,UniRef:UniRef50_Q9KVX5,UniRef:UniRef90_E6KZC3;ec_number=2.7.7.7 contig_1 Pyrodigal gene 288006 289082 . + . ID=GCA008085315_00277_gene;locus_tag=GCA008085315_00277;gene=recF contig_1 Pyrodigal CDS 288006 289082 . + 0 ID=GCA008085315_00277;Name=DNA replication/repair protein RecF;locus_tag=GCA008085315_00277;product=DNA replication/repair protein RecF;Dbxref=GO:0003697,GO:0005524,GO:0006260,GO:0006281,GO:0006310,GO:0009432;gene=recF;Parent=GCA008085315_00277_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1195,COG:L,RefSeq:WP_005547246.1,SO:0001217,UniParc:UPI00022AC50C,UniRef:UniRef100_UPI00022AC50C,UniRef:UniRef50_P0A7H0,UniRef:UniRef90_E6KZC4 contig_1 Pyrodigal gene 289129 289884 . - . ID=GCA008085315_00278_gene;locus_tag=GCA008085315_00278;gene=ubiE contig_1 Pyrodigal CDS 289129 289884 . - 0 ID=GCA008085315_00278;Name=Rebeccamycin O-methyltransferase;locus_tag=GCA008085315_00278;product=Rebeccamycin O-methyltransferase;gene=ubiE;Parent=GCA008085315_00278_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2226,COG:HJ,RefSeq:WP_005547252.1,SO:0001217,UniParc:UPI0001B9F389,UniRef:UniRef100_UPI0001B9F389,UniRef:UniRef50_Q57060,UniRef:UniRef90_A0A336NAF3 contig_1 Pyrodigal gene 290072 290647 . + . ID=GCA008085315_00279_gene;locus_tag=GCA008085315_00279;gene=sodC contig_1 Pyrodigal CDS 290072 290647 . + 0 ID=GCA008085315_00279;Name=superoxide dismutase [Cu-Zn] SodC;locus_tag=GCA008085315_00279;product=superoxide dismutase [Cu-Zn] SodC;Dbxref=GO:0004784;gene=sodC;Parent=GCA008085315_00279_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_P24702,UniRef:UniRef90_Q59081;ec_number=1.15.1.1 ##sequence-region contig_2 1 102471 contig_2 Bakta region 1 102471 . + . ID=contig_2;Name=contig_2 contig_2 Pyrodigal gene 98 1039 . - . ID=GCA008085315_00280_gene;locus_tag=GCA008085315_00280;gene=rbsB contig_2 Pyrodigal CDS 98 1039 . - 0 ID=GCA008085315_00280;Name=Monosaccharide-transporting ATPase;locus_tag=GCA008085315_00280;product=Monosaccharide-transporting ATPase;gene=rbsB;Parent=GCA008085315_00280_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1879,COG:G,RefSeq:WP_148321030.1,SO:0001217,UniParc:UPI0011DAA47F,UniRef:UniRef100_UPI0011DAA47F,UniRef:UniRef50_A6VKG5,UniRef:UniRef90_A6VKG5 contig_2 Pyrodigal gene 1202 2689 . + . ID=GCA008085315_00281_gene;locus_tag=GCA008085315_00281;gene=ccmA contig_2 Pyrodigal CDS 1202 2689 . + 0 ID=GCA008085315_00281;Name=heme ABC exporter ATP-binding protein CcmA;locus_tag=GCA008085315_00281;product=heme ABC exporter ATP-binding protein CcmA;Dbxref=GO:0015439,GO:0015886,GO:0017004,GO:0022857,GO:0043190;gene=ccmA;Parent=GCA008085315_00281_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1129,COG:G,RefSeq:WP_005546999.1,SO:0001217,UniParc:UPI0001B9F33D,UniRef:UniRef100_UPI0001B9F33D,UniRef:UniRef50_W0Q8J1,UniRef:UniRef90_A0A5D0EJK2;ec_number=7.6.2.5 contig_2 Pyrodigal gene 2705 3733 . + . ID=GCA008085315_00282_gene;locus_tag=GCA008085315_00282;gene=araH contig_2 Pyrodigal CDS 2705 3733 . + 0 ID=GCA008085315_00282;Name=ABC transporter permease;locus_tag=GCA008085315_00282;product=ABC transporter permease;gene=araH;Parent=GCA008085315_00282_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1172,COG:G,RefSeq:WP_005546996.1,SO:0001217,UniParc:UPI0001B9F33C,UniRef:UniRef100_UPI0001B9F33C,UniRef:UniRef50_A6VKG7,UniRef:UniRef90_A0A5D0EM40 contig_2 Pyrodigal gene 3739 5196 . + . ID=GCA008085315_00283_gene;locus_tag=GCA008085315_00283;gene=xylB contig_2 Pyrodigal CDS 3739 5196 . + 0 ID=GCA008085315_00283;Name=Carbohydrate kinase;locus_tag=GCA008085315_00283;product=Carbohydrate kinase;gene=xylB;Parent=GCA008085315_00283_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1070,COG:G,KEGG:K00880,RefSeq:WP_005546994.1,SO:0001217,UniParc:UPI0001B9F33B,UniRef:UniRef100_UPI0001B9F33B,UniRef:UniRef50_A0A263HDH0,UniRef:UniRef90_A0A142FZR7;ec_number=2.7.1.53 contig_2 Pyrodigal gene 5244 7559 . - . ID=GCA008085315_00284_gene;locus_tag=GCA008085315_00284;gene=tex contig_2 Pyrodigal CDS 5244 7559 . - 0 ID=GCA008085315_00284;Name=30S ribosomal protein S1;locus_tag=GCA008085315_00284;product=30S ribosomal protein S1;gene=tex;Parent=GCA008085315_00284_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2183,COG:K,KEGG:K06959,RefSeq:WP_005546992.1,SO:0001217,UniParc:UPI00022AE412,UniRef:UniRef100_UPI00022AE412,UniRef:UniRef50_P46837,UniRef:UniRef90_A0A336N5U7 contig_2 Pyrodigal gene 7776 8633 . - . ID=GCA008085315_00285_gene;locus_tag=GCA008085315_00285;gene=lysR contig_2 Pyrodigal CDS 7776 8633 . - 0 ID=GCA008085315_00285;Name=LysR family transcriptional regulator;locus_tag=GCA008085315_00285;product=LysR family transcriptional regulator;gene=lysR;Parent=GCA008085315_00285_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0583,COG:K,SO:0001217,UniRef:UniRef50_A0A379FBD4,UniRef:UniRef90_A0A5D0ENR4 contig_2 Pyrodigal gene 8773 10242 . + . ID=GCA008085315_00286_gene;locus_tag=GCA008085315_00286 contig_2 Pyrodigal CDS 8773 10242 . + 0 ID=GCA008085315_00286;Name=DASS family sodium-coupled anion symporter;locus_tag=GCA008085315_00286;product=DASS family sodium-coupled anion symporter;Parent=GCA008085315_00286_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148321031.1,SO:0001217,UniParc:UPI0011D4B147,UniRef:UniRef100_UPI0011D4B147,UniRef:UniRef50_A0A410WYU8,UniRef:UniRef90_A0A5D0EN99 contig_2 Pyrodigal gene 10254 10853 . + . ID=GCA008085315_00287_gene;locus_tag=GCA008085315_00287;gene=phoE contig_2 Pyrodigal CDS 10254 10853 . + 0 ID=GCA008085315_00287;Name=Histidine phosphatase family protein;locus_tag=GCA008085315_00287;product=Histidine phosphatase family protein;gene=phoE;Parent=GCA008085315_00287_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0406,COG:G,RefSeq:WP_005546983.1,SO:0001217,UniParc:UPI0001B9F335,UniRef:UniRef100_UPI0001B9F335,UniRef:UniRef50_A0A0D6B0P4,UniRef:UniRef90_A0A5D0EN96 contig_2 Pyrodigal gene 11588 12070 . + . ID=GCA008085315_00288_gene;locus_tag=GCA008085315_00288;gene=greB contig_2 Pyrodigal CDS 11588 12070 . + 0 ID=GCA008085315_00288;Name=transcription elongation factor GreB;locus_tag=GCA008085315_00288;product=transcription elongation factor GreB;Dbxref=GO:0003677,GO:0032784,GO:0070063;gene=greB;Parent=GCA008085315_00288_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0782,COG:K,KEGG:K04760,RefSeq:WP_005546979.1,SO:0001217,UniParc:UPI0001B9F333,UniRef:UniRef100_UPI0001B9F333,UniRef:UniRef50_Q7VM42,UniRef:UniRef90_A0A5D0ENB7 contig_2 Pyrodigal gene 12153 12344 . - . ID=GCA008085315_00289_gene;locus_tag=GCA008085315_00289 contig_2 Pyrodigal CDS 12153 12344 . - 0 ID=GCA008085315_00289;Name=Zf-HC2 domain-containing protein;locus_tag=GCA008085315_00289;product=Zf-HC2 domain-containing protein;Parent=GCA008085315_00289_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005546977.1,SO:0001217,UniParc:UPI0001B9F332,UniRef:UniRef100_UPI0001B9F332,UniRef:UniRef50_U1SDA3,UniRef:UniRef90_A0A5D0ENA5 contig_2 Pyrodigal gene 12359 12946 . - . ID=GCA008085315_00290_gene;locus_tag=GCA008085315_00290;gene=rpoE contig_2 Pyrodigal CDS 12359 12946 . - 0 ID=GCA008085315_00290;Name=RNA polymerase sigma factor;locus_tag=GCA008085315_00290;product=RNA polymerase sigma factor;gene=rpoE;Parent=GCA008085315_00290_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1595,COG:K,RefSeq:WP_005540532.1,SO:0001217,UniParc:UPI0001B9F331,UniRef:UniRef100_A0AAC9AHW7,UniRef:UniRef50_A0A377HUP5,UniRef:UniRef90_G4ABD9 contig_2 Pyrodigal gene 13132 13413 . - . ID=GCA008085315_00291_gene;locus_tag=GCA008085315_00291 contig_2 Pyrodigal CDS 13132 13413 . - 0 ID=GCA008085315_00291;Name=Pentapeptide MXKDX repeat protein;locus_tag=GCA008085315_00291;product=Pentapeptide MXKDX repeat protein;Parent=GCA008085315_00291_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005540529.1,SO:0001217,UniParc:UPI0001B9F330,UniRef:UniRef100_A0A142FZS7,UniRef:UniRef50_A0AAP7H081,UniRef:UniRef90_A0A142FZS7 contig_2 Pyrodigal gene 13675 14412 . + . ID=GCA008085315_00292_gene;locus_tag=GCA008085315_00292;gene=yhhQ contig_2 Pyrodigal CDS 13675 14412 . + 0 ID=GCA008085315_00292;Name=7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter;locus_tag=GCA008085315_00292;product=7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter;Dbxref=GO:1990397;gene=yhhQ;Parent=GCA008085315_00292_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1738,COG:J,KEGG:K09125,RefSeq:WP_005546974.1,SO:0001217,UniParc:UPI0001B9F32F,UniRef:UniRef100_UPI0001B9F32F,UniRef:UniRef50_P44908,UniRef:UniRef90_A0A5D0EN91 contig_2 Pyrodigal gene 14479 15729 . - . ID=GCA008085315_00293_gene;locus_tag=GCA008085315_00293;gene=hemY contig_2 Pyrodigal CDS 14479 15729 . - 0 ID=GCA008085315_00293;Name=Heme biosynthesis protein HemY;locus_tag=GCA008085315_00293;product=Heme biosynthesis protein HemY;gene=hemY;Parent=GCA008085315_00293_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3071,COG:S,RefSeq:WP_005546972.1,SO:0001217,UniParc:UPI0001B9F32E,UniRef:UniRef100_UPI0001B9F32E,UniRef:UniRef50_P44772,UniRef:UniRef90_A0A5D0ENB9 contig_2 Pyrodigal gene 15742 17127 . - . ID=GCA008085315_00294_gene;locus_tag=GCA008085315_00294;gene=hemX contig_2 Pyrodigal CDS 15742 17127 . - 0 ID=GCA008085315_00294;Name=uroporphyrinogen-III C-methyltransferase;locus_tag=GCA008085315_00294;product=uroporphyrinogen-III C-methyltransferase;gene=hemX;Parent=GCA008085315_00294_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2959,COG:R,KEGG:K02496,RefSeq:WP_005546970.1,SO:0001217,UniParc:UPI0001B9F32D,UniRef:UniRef100_UPI0001B9F32D,UniRef:UniRef50_Q0I176,UniRef:UniRef90_UPI00022C00EC;ec_number=2.1.1.107 contig_2 Pyrodigal gene 17156 17902 . - . ID=GCA008085315_00295_gene;locus_tag=GCA008085315_00295;gene=hemD contig_2 Pyrodigal CDS 17156 17902 . - 0 ID=GCA008085315_00295;Name=Uroporphyrinogen-III synthase;locus_tag=GCA008085315_00295;product=Uroporphyrinogen-III synthase;gene=hemD;Parent=GCA008085315_00295_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1587,COG:H,RefSeq:WP_005574357.1,SO:0001217,UniParc:UPI0001B9F32C,UniRef:UniRef100_UPI0001B9F32C,UniRef:UniRef50_A3N117,UniRef:UniRef90_A0A5D0ENA8 contig_2 Pyrodigal gene 17915 18898 . - . ID=GCA008085315_00296_gene;locus_tag=GCA008085315_00296;gene=hemC contig_2 Pyrodigal CDS 17915 18898 . - 0 ID=GCA008085315_00296;Name=hydroxymethylbilane synthase;locus_tag=GCA008085315_00296;product=hydroxymethylbilane synthase;Dbxref=GO:0004418,GO:0033014;gene=hemC;Parent=GCA008085315_00296_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0181,COG:H,KEGG:K01749,SO:0001217,UniRef:UniRef50_P06983,UniRef:UniRef90_A0A5D0ENA6;ec_number=2.5.1.61 contig_2 Pyrodigal gene 18997 21498 . + . ID=GCA008085315_00297_gene;locus_tag=GCA008085315_00297;gene=cyaA contig_2 Pyrodigal CDS 18997 21498 . + 0 ID=GCA008085315_00297;Name=class I adenylate cyclase;locus_tag=GCA008085315_00297;product=class I adenylate cyclase;gene=cyaA;Parent=GCA008085315_00297_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3072,COG:T,KEGG:K05851,RefSeq:WP_148334006.1,SO:0001217,UniParc:UPI0011D52588,UniRef:UniRef100_UPI0011D52588,UniRef:UniRef50_P40134,UniRef:UniRef90_A0A5D0EN98;ec_number=4.6.1.1 contig_2 Pyrodigal gene 21508 22137 . + . ID=GCA008085315_00298_gene;locus_tag=GCA008085315_00298;gene=narL contig_2 Pyrodigal CDS 21508 22137 . + 0 ID=GCA008085315_00298;Name=two-component system response regulator NarL;locus_tag=GCA008085315_00298;product=two-component system response regulator NarL;Dbxref=GO:0000160,GO:0003677,GO:0006355;gene=narL;Parent=GCA008085315_00298_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2197,COG:TK,KEGG:K07685,RefSeq:WP_005546963.1,SO:0001217,UniParc:UPI0001B9F329,UniRef:UniRef100_UPI0001B9F329,UniRef:UniRef50_P31802,UniRef:UniRef90_A0A142FZT4 contig_2 Pyrodigal gene 22303 24063 . + . ID=GCA008085315_00299_gene;locus_tag=GCA008085315_00299;gene=tamA contig_2 Pyrodigal CDS 22303 24063 . + 0 ID=GCA008085315_00299;Name=Translocation and assembly module subunit TamA;locus_tag=GCA008085315_00299;product=Translocation and assembly module subunit TamA;gene=tamA;Parent=GCA008085315_00299_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0729,COG:M,SO:0001217,UniRef:UniRef50_P44038,UniRef:UniRef90_A0A5D0ENB3 contig_2 Pyrodigal gene 24091 27972 . + . ID=GCA008085315_00300_gene;locus_tag=GCA008085315_00300;gene=tamB contig_2 Pyrodigal CDS 24091 27972 . + 0 ID=GCA008085315_00300;Name=Putative tubulin binding protein;locus_tag=GCA008085315_00300;product=Putative tubulin binding protein;gene=tamB;Parent=GCA008085315_00300_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2911,COG:U,RefSeq:WP_148321033.1,SO:0001217,UniParc:UPI0011D3ECB0,UniRef:UniRef100_UPI0011D3ECB0,UniRef:UniRef50_Q65VW7,UniRef:UniRef90_Q4JI69 contig_2 Pyrodigal gene 27975 29522 . + . ID=GCA008085315_00301_gene;locus_tag=GCA008085315_00301;gene=ppx contig_2 Pyrodigal CDS 27975 29522 . + 0 ID=GCA008085315_00301;Name=exopolyphosphatase;locus_tag=GCA008085315_00301;product=exopolyphosphatase;Dbxref=GO:0000287,GO:0004309,GO:0006798;gene=ppx;Parent=GCA008085315_00301_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0248,COG:FT,KEGG:K01524,RefSeq:WP_005546956.1,SO:0001217,UniParc:UPI0001B9F326,UniRef:UniRef100_UPI0001B9F326,UniRef:UniRef50_A0A369YED1,UniRef:UniRef90_A0A5D0ENA4;ec_number=3.6.1.40 contig_2 Pyrodigal gene 29587 31203 . - . ID=GCA008085315_00302_gene;locus_tag=GCA008085315_00302;gene=pckA contig_2 Pyrodigal CDS 29587 31203 . - 0 ID=GCA008085315_00302;Name=phosphoenolpyruvate carboxykinase (ATP);locus_tag=GCA008085315_00302;product=phosphoenolpyruvate carboxykinase (ATP);Dbxref=GO:0004612,GO:0005524,GO:0005829,GO:0006094,GO:0046872;gene=pckA;Parent=GCA008085315_00302_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1866,KEGG:K01610,RefSeq:WP_005546953.1,SO:0001217,UniParc:UPI0001B9F325,UniRef:UniRef100_UPI0001B9F325,UniRef:UniRef50_Q5E1X3,UniRef:UniRef90_P43923;ec_number=4.1.1.49 contig_2 Pyrodigal gene 31461 32105 . + . ID=GCA008085315_00303_gene;locus_tag=GCA008085315_00303 contig_2 Pyrodigal CDS 31461 32105 . + 0 ID=GCA008085315_00303;Name=Outer membrane protein;locus_tag=GCA008085315_00303;product=Outer membrane protein;Parent=GCA008085315_00303_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005546951.1,SO:0001217,UniParc:UPI0001B9F2AE,UniRef:UniRef100_UPI0001B9F2AE,UniRef:UniRef50_Q9CKJ3,UniRef:UniRef90_A0A5D0ENC7 contig_2 Pyrodigal gene 32244 33029 . + . ID=GCA008085315_00304_gene;locus_tag=GCA008085315_00304;gene=nudC contig_2 Pyrodigal CDS 32244 33029 . + 0 ID=GCA008085315_00304;Name=NAD(+) diphosphatase;locus_tag=GCA008085315_00304;product=NAD(+) diphosphatase;Dbxref=GO:0000210,GO:0016787;gene=nudC;Parent=GCA008085315_00304_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2816,COG:F,KEGG:K03426,RefSeq:WP_032995967.1,SO:0001217,UniParc:UPI0002F76F85,UniRef:UniRef100_UPI0002F76F85,UniRef:UniRef50_P57965,UniRef:UniRef90_G4ABC5;ec_number=3.6.1.22 contig_2 Pyrodigal gene 33042 34106 . + . ID=GCA008085315_00305_gene;locus_tag=GCA008085315_00305;gene=hemE contig_2 Pyrodigal CDS 33042 34106 . + 0 ID=GCA008085315_00305;Name=uroporphyrinogen decarboxylase;locus_tag=GCA008085315_00305;product=uroporphyrinogen decarboxylase;Dbxref=GO:0004853,GO:0006779;gene=hemE;Parent=GCA008085315_00305_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0407,COG:H,KEGG:K01599,RefSeq:WP_005546946.1,SO:0001217,UniParc:UPI0001B9F2AC,UniRef:UniRef100_UPI0001B9F2AC,UniRef:UniRef50_P29680,UniRef:UniRef90_E6L056;ec_number=4.1.1.37 contig_2 Pyrodigal gene 34124 34714 . + . ID=GCA008085315_00306_gene;locus_tag=GCA008085315_00306;gene=yjaG contig_2 Pyrodigal CDS 34124 34714 . + 0 ID=GCA008085315_00306;Name=D-fructose-6-phosphate amidotransferase;locus_tag=GCA008085315_00306;product=D-fructose-6-phosphate amidotransferase;gene=yjaG;Parent=GCA008085315_00306_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3068,COG:S,RefSeq:WP_005574341.1,SO:0001217,UniParc:UPI0001B9F2AB,UniRef:UniRef100_UPI0001B9F2AB,UniRef:UniRef50_P44709,UniRef:UniRef90_G4ABC3 contig_2 Pyrodigal gene 34881 35153 . + . ID=GCA008085315_00307_gene;locus_tag=GCA008085315_00307;gene=hupA contig_2 Pyrodigal CDS 34881 35153 . + 0 ID=GCA008085315_00307;Name=NS2;locus_tag=GCA008085315_00307;product=NS2;gene=hupA;Parent=GCA008085315_00307_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:B,COG:COG0776,RefSeq:WP_005541993.1,SO:0001217,UniParc:UPI0001B9F2AA,UniRef:UniRef100_A0A142FZU1,UniRef:UniRef50_P0ACF0,UniRef:UniRef90_A0A3S4KYK5 contig_2 Pyrodigal gene 35300 36076 . + . ID=GCA008085315_00308_gene;locus_tag=GCA008085315_00308;gene=glpR contig_2 Pyrodigal CDS 35300 36076 . + 0 ID=GCA008085315_00308;Name=HTH-type transcriptional repressor glcR;locus_tag=GCA008085315_00308;product=HTH-type transcriptional repressor glcR;gene=glpR;Parent=GCA008085315_00308_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1349,COG:KG,RefSeq:WP_148321035.1,SO:0001217,UniParc:UPI0011D36AB2,UniRef:UniRef100_UPI0011D36AB2,UniRef:UniRef50_Q9HT24,UniRef:UniRef90_A0A3S5ECN8 contig_2 Pyrodigal gene 36131 37963 . + . ID=GCA008085315_00309_gene;locus_tag=GCA008085315_00309;gene=glmS contig_2 Pyrodigal CDS 36131 37963 . + 0 ID=GCA008085315_00309;Name=glutamine--fructose-6-phosphate transaminase (isomerizing);locus_tag=GCA008085315_00309;product=glutamine--fructose-6-phosphate transaminase (isomerizing);Dbxref=GO:0004360,GO:1901137;gene=glmS;Parent=GCA008085315_00309_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00820,RefSeq:WP_005546941.1,SO:0001217,UniParc:UPI00022AD0F4,UniRef:UniRef100_UPI00022AD0F4,UniRef:UniRef50_Q9KUM8,UniRef:UniRef90_A0A5D0ENE0;ec_number=2.6.1.16 contig_2 Pyrodigal gene 38115 39179 . - . ID=GCA008085315_00310_gene;locus_tag=GCA008085315_00310;gene=frsA contig_2 Pyrodigal CDS 38115 39179 . - 0 ID=GCA008085315_00310;Name=Alpha/beta hydrolase;locus_tag=GCA008085315_00310;product=Alpha/beta hydrolase;gene=frsA;Parent=GCA008085315_00310_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1073,COG:T,RefSeq:WP_148334007.1,SO:0001217,UniParc:UPI0011DADF65,UniRef:UniRef100_UPI0011DADF65,UniRef:UniRef50_B8DSC8,UniRef:UniRef90_A0A5D0ENC2 contig_2 Pyrodigal gene 39279 40169 . + . ID=GCA008085315_00311_gene;locus_tag=GCA008085315_00311;gene=lysR contig_2 Pyrodigal CDS 39279 40169 . + 0 ID=GCA008085315_00311;Name=LysR family transcriptional regulator;locus_tag=GCA008085315_00311;product=LysR family transcriptional regulator;gene=lysR;Parent=GCA008085315_00311_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0583,COG:K,RefSeq:WP_005574335.1,SO:0001217,UniParc:UPI0001B9F2A5,UniRef:UniRef100_UPI0001B9F2A5,UniRef:UniRef50_Q65T93,UniRef:UniRef90_A0A142FZU5 contig_2 Pyrodigal gene 40308 41417 . - . ID=GCA008085315_00312_gene;locus_tag=GCA008085315_00312 contig_2 Pyrodigal CDS 40308 41417 . - 0 ID=GCA008085315_00312;Name=Alpha/beta fold hydrolase;locus_tag=GCA008085315_00312;product=Alpha/beta fold hydrolase;Parent=GCA008085315_00312_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148334008.1,SO:0001217,UniParc:UPI0011D38D35,UniRef:UniRef100_UPI0011D38D35,UniRef:UniRef50_K0G645,UniRef:UniRef90_A0A5D0ENB4 contig_2 Pyrodigal gene 41554 41886 . - . ID=GCA008085315_00313_gene;locus_tag=GCA008085315_00313 contig_2 Pyrodigal CDS 41554 41886 . - 0 ID=GCA008085315_00313;Name=Carboxylesterase type B domain-containing protein;locus_tag=GCA008085315_00313;product=Carboxylesterase type B domain-containing protein;Parent=GCA008085315_00313_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_U2RDN3 contig_2 Pyrodigal gene 42154 42963 . - . ID=GCA008085315_00314_gene;locus_tag=GCA008085315_00314 contig_2 Pyrodigal CDS 42154 42963 . - 0 ID=GCA008085315_00314;Name=Carboxylic ester hydrolase;locus_tag=GCA008085315_00314;product=Carboxylic ester hydrolase;Parent=GCA008085315_00314_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A3D2QDT4 contig_2 Pyrodigal gene 43081 43209 . - . ID=GCA008085315_00315_gene;locus_tag=GCA008085315_00315 contig_2 Pyrodigal CDS 43081 43209 . - 0 ID=GCA008085315_00315;Name=hypothetical protein;locus_tag=GCA008085315_00315;product=hypothetical protein;Parent=GCA008085315_00315_gene;inference=ab initio prediction:Pyrodigal:3.5 contig_2 Pyrodigal gene 43435 44415 . - . ID=GCA008085315_00316_gene;locus_tag=GCA008085315_00316;gene=pdxI contig_2 Pyrodigal CDS 43435 44415 . - 0 ID=GCA008085315_00316;Name=Aldehyde oxidase;locus_tag=GCA008085315_00316;product=Aldehyde oxidase;gene=pdxI;Parent=GCA008085315_00316_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0667,COG:HR,RefSeq:WP_005546926.1,SO:0001217,UniParc:UPI0001B9F2A1,UniRef:UniRef100_UPI0001B9F2A1,UniRef:UniRef50_A0A9W4L3U1,UniRef:UniRef90_A0A5D0END8 contig_2 Pyrodigal gene 44479 45324 . - . ID=GCA008085315_00317_gene;locus_tag=GCA008085315_00317;gene=aRA1 contig_2 Pyrodigal CDS 44479 45324 . - 0 ID=GCA008085315_00317;Name=2%2C5-diketo-D-gluconic acid reductase;locus_tag=GCA008085315_00317;product=2%2C5-diketo-D-gluconic acid reductase;gene=aRA1;Parent=GCA008085315_00317_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0656,COG:Q,RefSeq:WP_005546924.1,SO:0001217,UniParc:UPI0001B9F2A0,UniRef:UniRef100_UPI0001B9F2A0,UniRef:UniRef50_A0A3G4VLZ9,UniRef:UniRef90_A0A5D0ENU2 contig_2 Infernal gene 45378 45468 . + . ID=GCA008085315_00318_gene;locus_tag=GCA008085315_00318;gene=AaHKsRNA22 contig_2 Infernal ncRNA 45378 45468 4.2e-06 + . ID=GCA008085315_00318;Name=Aggregatibacter sRNA 22;locus_tag=GCA008085315_00318;product=Aggregatibacter sRNA 22;Dbxref=RFAM:RF02902;Parent=GCA008085315_00318_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02902 contig_2 Pyrodigal gene 45683 46576 . + . ID=GCA008085315_00319_gene;locus_tag=GCA008085315_00319;gene=lysR contig_2 Pyrodigal CDS 45683 46576 . + 0 ID=GCA008085315_00319;Name=LysR family transcriptional regulator;locus_tag=GCA008085315_00319;product=LysR family transcriptional regulator;gene=lysR;Parent=GCA008085315_00319_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0583,COG:K,RefSeq:WP_148334009.1,SO:0001217,UniParc:UPI0011D51267,UniRef:UniRef100_UPI0011D51267,UniRef:UniRef50_A0A249A1S3,UniRef:UniRef90_A0A142FZU9 contig_2 Pyrodigal gene 46654 47469 . - . ID=GCA008085315_00320_gene;locus_tag=GCA008085315_00320;gene=yktD contig_2 Pyrodigal CDS 46654 47469 . - 0 ID=GCA008085315_00320;Name=Methyltransferase;locus_tag=GCA008085315_00320;product=Methyltransferase;gene=yktD;Parent=GCA008085315_00320_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3315,COG:Q,RefSeq:WP_005546920.1,SO:0001217,UniParc:UPI0001B9F29E,UniRef:UniRef100_UPI0001B9F29E,UniRef:UniRef50_G4CGV1,UniRef:UniRef90_A0A142FZV0 contig_2 Infernal gene 47641 47739 . - . ID=GCA008085315_00321_gene;locus_tag=GCA008085315_00321;gene=AaHKsRNA22 contig_2 Infernal ncRNA 47641 47739 6e-13 - . ID=GCA008085315_00321;Name=Aggregatibacter sRNA 22;locus_tag=GCA008085315_00321;product=Aggregatibacter sRNA 22;Dbxref=RFAM:RF02902;Parent=GCA008085315_00321_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02902 contig_2 Pyrodigal gene 47808 49307 . - . ID=GCA008085315_00322_gene;locus_tag=GCA008085315_00322;gene=cedB contig_2 Pyrodigal CDS 47808 49307 . - 0 ID=GCA008085315_00322;Name=AAA+ ATPase domain-containing protein;locus_tag=GCA008085315_00322;product=AAA+ ATPase domain-containing protein;gene=cedB;Parent=GCA008085315_00322_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0433,COG:L,RefSeq:WP_005570754.1,SO:0001217,UniParc:UPI0001B9F29D,UniRef:UniRef100_UPI0001B9F29D,UniRef:UniRef50_A0A562B2L5,UniRef:UniRef90_U1S5Z8 contig_2 Pyrodigal gene 49433 49726 . + . ID=GCA008085315_00323_gene;locus_tag=GCA008085315_00323 contig_2 Pyrodigal CDS 49433 49726 . + 0 ID=GCA008085315_00323;Name=putative protein HI_0279;locus_tag=GCA008085315_00323;product=putative protein HI_0279;Parent=GCA008085315_00323_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_P43977 contig_2 Pyrodigal gene 49711 50100 . + . ID=GCA008085315_00324_gene;locus_tag=GCA008085315_00324 contig_2 Pyrodigal CDS 49711 50100 . + 0 ID=GCA008085315_00324;Name=Uridine phosphorylase;locus_tag=GCA008085315_00324;product=Uridine phosphorylase;Parent=GCA008085315_00324_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A2X1PQS8 contig_2 Pyrodigal gene 50103 50576 . + . ID=GCA008085315_00325_gene;locus_tag=GCA008085315_00325;gene=ychJ contig_2 Pyrodigal CDS 50103 50576 . + 0 ID=GCA008085315_00325;Name=YchJ family protein;locus_tag=GCA008085315_00325;product=YchJ family protein;gene=ychJ;Parent=GCA008085315_00325_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148321038.1,SO:0001217,UniParc:UPI0011DB91D4,UniRef:UniRef100_UPI0011DB91D4,UniRef:UniRef50_A0A0F5F2E4,UniRef:UniRef90_UPI00215A1E1F contig_2 Pyrodigal gene 50573 51403 . + . ID=GCA008085315_00326_gene;locus_tag=GCA008085315_00326;gene=brkB contig_2 Pyrodigal CDS 50573 51403 . + 0 ID=GCA008085315_00326;Name=virulence factor BrkB family protein;locus_tag=GCA008085315_00326;product=virulence factor BrkB family protein;Dbxref=GO:0005886;gene=brkB;Parent=GCA008085315_00326_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1295,COG:S,RefSeq:WP_005546913.1,SO:0001217,UniParc:UPI0001B9F29A,UniRef:UniRef100_UPI0001B9F29A,UniRef:UniRef50_P44608,UniRef:UniRef90_C6AQL9 contig_2 Pyrodigal gene 51400 51834 . + . ID=GCA008085315_00327_gene;locus_tag=GCA008085315_00327;gene=dtd contig_2 Pyrodigal CDS 51400 51834 . + 0 ID=GCA008085315_00327;Name=D-aminoacyl-tRNA deacylase;locus_tag=GCA008085315_00327;product=D-aminoacyl-tRNA deacylase;Dbxref=GO:0004045,GO:0008152;gene=dtd;Parent=GCA008085315_00327_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1490,COG:J,KEGG:K07560,RefSeq:WP_005546911.1,SO:0001217,UniParc:UPI0001B9F299,UniRef:UniRef100_UPI0001B9F299,UniRef:UniRef50_P58534,UniRef:UniRef90_A0A142FZV5;ec_number=3.1.1.96 contig_2 Pyrodigal gene 52000 53208 . + . ID=GCA008085315_00328_gene;locus_tag=GCA008085315_00328;gene=gltS contig_2 Pyrodigal CDS 52000 53208 . + 0 ID=GCA008085315_00328;Name=sodium/glutamate symporter;locus_tag=GCA008085315_00328;product=sodium/glutamate symporter;Dbxref=GO:0015501,GO:0015813,GO:0016020;gene=gltS;Parent=GCA008085315_00328_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0786,COG:E,KEGG:K03312,RefSeq:WP_005588866.1,SO:0001217,UniParc:UPI0002ACF7C2,UniRef:UniRef100_UPI0002ACF7C2,UniRef:UniRef50_P45240,UniRef:UniRef90_A0A5D0ENC1 contig_2 Pyrodigal gene 53264 54652 . - . ID=GCA008085315_00329_gene;locus_tag=GCA008085315_00329;gene=cpxA contig_2 Pyrodigal CDS 53264 54652 . - 0 ID=GCA008085315_00329;Name=envelope stress sensor histidine kinase CpxA;locus_tag=GCA008085315_00329;product=envelope stress sensor histidine kinase CpxA;Dbxref=GO:0000155,GO:0007165;gene=cpxA;Parent=GCA008085315_00329_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5002,COG:T,KEGG:K07640,RefSeq:WP_005546145.1,SO:0001217,UniParc:UPI0001B9F297,UniRef:UniRef100_UPI0001B9F297,UniRef:UniRef50_A0A5D0ENC4,UniRef:UniRef90_A0A5D0ENC4;ec_number=3.6.1.- contig_2 Pyrodigal gene 54697 55392 . - . ID=GCA008085315_00330_gene;locus_tag=GCA008085315_00330;gene=ompR contig_2 Pyrodigal CDS 54697 55392 . - 0 ID=GCA008085315_00330;Name=Transcriptional regulatory protein YycF;locus_tag=GCA008085315_00330;product=Transcriptional regulatory protein YycF;gene=ompR;Parent=GCA008085315_00330_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0745,COG:TK,RefSeq:WP_005542017.1,SO:0001217,UniParc:UPI0001B9F296,UniRef:UniRef100_A0A142FZV8,UniRef:UniRef50_Q7VLH6,UniRef:UniRef90_A0A336N7Y4 contig_2 Pyrodigal gene 55434 55847 . - . ID=GCA008085315_00331_gene;locus_tag=GCA008085315_00331;gene=bamE contig_2 Pyrodigal CDS 55434 55847 . - 0 ID=GCA008085315_00331;Name=outer membrane protein assembly factor BamE;locus_tag=GCA008085315_00331;product=outer membrane protein assembly factor BamE;gene=bamE;Parent=GCA008085315_00331_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2913,COG:M,KEGG:K06186,RefSeq:WP_005546147.1,SO:0001217,UniParc:UPI0001B9F295,UniRef:UniRef100_UPI0001B9F295,UniRef:UniRef50_P44057,UniRef:UniRef90_A0A142FZV9 contig_2 Pyrodigal gene 55913 56938 . - . ID=GCA008085315_00332_gene;locus_tag=GCA008085315_00332;gene=yejK contig_2 Pyrodigal CDS 55913 56938 . - 0 ID=GCA008085315_00332;Name=nucleoid-associated protein YejK;locus_tag=GCA008085315_00332;product=nucleoid-associated protein YejK;Dbxref=GO:0009295;gene=yejK;Parent=GCA008085315_00332_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3081,COG:L,KEGG:K06899,RefSeq:WP_005588172.1,SO:0001217,UniParc:UPI0001B9F294,UniRef:UniRef100_UPI0001B9F294,UniRef:UniRef50_Q65R92,UniRef:UniRef90_A0A142FZW0 contig_2 Pyrodigal gene 57065 57289 . + . ID=GCA008085315_00333_gene;locus_tag=GCA008085315_00333;gene=yejL contig_2 Pyrodigal CDS 57065 57289 . + 0 ID=GCA008085315_00333;Name=UPF0352 protein ACT75_05085;locus_tag=GCA008085315_00333;product=UPF0352 protein ACT75_05085;gene=yejL;Parent=GCA008085315_00333_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3082,COG:S,KEGG:K09904,RefSeq:WP_005546151.1,SO:0001217,UniParc:UPI0001B9F293,UniRef:UniRef100_A0A5D0KUV2,UniRef:UniRef50_A8FU97,UniRef:UniRef90_A0A5D0KUV2 contig_2 Pyrodigal gene 57294 59033 . + . ID=GCA008085315_00334_gene;locus_tag=GCA008085315_00334;gene=yejM contig_2 Pyrodigal CDS 57294 59033 . + 0 ID=GCA008085315_00334;Name=DUF3413 domain-containing protein;locus_tag=GCA008085315_00334;product=DUF3413 domain-containing protein;gene=yejM;Parent=GCA008085315_00334_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3083,COG:MT,KEGG:K07014,RefSeq:WP_005588173.1,SO:0001217,UniParc:UPI0002ABDFFA,UniRef:UniRef100_UPI0002ABDFFA,UniRef:UniRef50_P44898,UniRef:UniRef90_A0A5D0END5 contig_2 Pyrodigal gene 59292 60281 . + . ID=GCA008085315_00335_gene;locus_tag=GCA008085315_00335;gene=ssnA contig_2 Pyrodigal CDS 59292 60281 . + 0 ID=GCA008085315_00335;Name=putative protein HI_0843;locus_tag=GCA008085315_00335;product=putative protein HI_0843;gene=ssnA;Parent=GCA008085315_00335_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0402,COG:FR,RefSeq:WP_005546155.1,SO:0001217,UniParc:UPI0001B9F291,UniRef:UniRef100_UPI0001B9F291,UniRef:UniRef50_P44058,UniRef:UniRef90_P44059 contig_2 Pyrodigal gene 60379 61173 . - . ID=GCA008085315_00336_gene;locus_tag=GCA008085315_00336;gene=mazG contig_2 Pyrodigal CDS 60379 61173 . - 0 ID=GCA008085315_00336;Name=nucleoside triphosphate pyrophosphohydrolase;locus_tag=GCA008085315_00336;product=nucleoside triphosphate pyrophosphohydrolase;gene=mazG;Parent=GCA008085315_00336_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3956,COG:R,RefSeq:WP_148321039.1,SO:0001217,UniParc:UPI0011D52590,UniRef:UniRef100_UPI0011D52590,UniRef:UniRef50_A0A1V4AYJ6,UniRef:UniRef90_A0A5D0ENF8;ec_number=3.6.1.9 contig_2 Pyrodigal gene 61355 61780 . + . ID=GCA008085315_00337_gene;locus_tag=GCA008085315_00337;gene=uspA contig_2 Pyrodigal CDS 61355 61780 . + 0 ID=GCA008085315_00337;Name=universal stress protein UspA;locus_tag=GCA008085315_00337;product=universal stress protein UspA;gene=uspA;Parent=GCA008085315_00337_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0589,COG:T,RefSeq:WP_005542026.1,SO:0001217,UniParc:UPI0001B9F28F,UniRef:UniRef100_A0AAC8Y0M1,UniRef:UniRef50_P44880,UniRef:UniRef90_E6L036 contig_2 Pyrodigal gene 61980 64604 . + . ID=GCA008085315_00338_gene;locus_tag=GCA008085315_00338;gene=alaS contig_2 Pyrodigal CDS 61980 64604 . + 0 ID=GCA008085315_00338;Name=alanine--tRNA ligase;locus_tag=GCA008085315_00338;product=alanine--tRNA ligase;Dbxref=GO:0000166,GO:0004813,GO:0005737,GO:0006419;gene=alaS;Parent=GCA008085315_00338_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0013,COG:J,RefSeq:WP_012820889.1,SO:0001217,UniParc:UPI0001B9F28E,UniRef:UniRef100_UPI0001B9F28E,UniRef:UniRef50_Q8ZBT8,UniRef:UniRef90_E6L035;ec_number=6.1.1.7 contig_2 Pyrodigal gene 64727 64909 . + . ID=GCA008085315_00339_gene;locus_tag=GCA008085315_00339;gene=csrA contig_2 Pyrodigal CDS 64727 64909 . + 0 ID=GCA008085315_00339;Name=carbon storage regulator CsrA;locus_tag=GCA008085315_00339;product=carbon storage regulator CsrA;Dbxref=GO:0003723,GO:0006109,GO:0006402;gene=csrA;Parent=GCA008085315_00339_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1551,COG:T,RefSeq:WP_005542029.1,SO:0001217,UniParc:UPI0001B9F28D,UniRef:UniRef100_A0A5D0KX90,UniRef:UniRef50_B0UTE2,UniRef:UniRef90_A0A5D0KX90 contig_2 Pyrodigal gene 64941 66305 . + . ID=GCA008085315_00340_gene;locus_tag=GCA008085315_00340;gene=manB contig_2 Pyrodigal CDS 64941 66305 . + 0 ID=GCA008085315_00340;Name=phosphomannomutase;locus_tag=GCA008085315_00340;product=phosphomannomutase;gene=manB;Parent=GCA008085315_00340_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1109,COG:G,RefSeq:WP_005546162.1,SO:0001217,UniParc:UPI0001B9F28C,UniRef:UniRef100_UPI0001B9F28C,UniRef:UniRef50_P37755,UniRef:UniRef90_A0A379B6I2 contig_2 Pyrodigal gene 66381 67268 . + . ID=GCA008085315_00341_gene;locus_tag=GCA008085315_00341;gene=galU contig_2 Pyrodigal CDS 66381 67268 . + 0 ID=GCA008085315_00341;Name=UTP--glucose-1-phosphate uridylyltransferase GalU;locus_tag=GCA008085315_00341;product=UTP--glucose-1-phosphate uridylyltransferase GalU;Dbxref=GO:0003983,GO:0006011;gene=galU;Parent=GCA008085315_00341_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1210,COG:M,KEGG:K00963,RefSeq:WP_005546163.1,SO:0001217,UniParc:UPI0001B9F28B,UniRef:UniRef100_UPI0001B9F28B,UniRef:UniRef50_P0AEP3,UniRef:UniRef90_A0A142FZW7;ec_number=2.7.7.9 contig_2 Pyrodigal gene 67423 67740 . + . ID=GCA008085315_00342_gene;locus_tag=GCA008085315_00342;gene=metJ contig_2 Pyrodigal CDS 67423 67740 . + 0 ID=GCA008085315_00342;Name=met regulon transcriptional regulator MetJ;locus_tag=GCA008085315_00342;product=met regulon transcriptional regulator MetJ;Dbxref=GO:0003677,GO:0003700,GO:0005737,GO:0009086,GO:0045892;gene=metJ;Parent=GCA008085315_00342_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3060,COG:KE,KEGG:K03764,RefSeq:WP_005546165.1,SO:0001217,UniParc:UPI0001B9F28A,UniRef:UniRef100_UPI0001B9F28A,UniRef:UniRef50_P06203,UniRef:UniRef90_Q9CLE7 contig_2 Pyrodigal gene 67827 68561 . + . ID=GCA008085315_00343_gene;locus_tag=GCA008085315_00343;gene=rsmE contig_2 Pyrodigal CDS 67827 68561 . + 0 ID=GCA008085315_00343;Name=16S rRNA (uracil(1498)-N(3))-methyltransferase;locus_tag=GCA008085315_00343;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;Dbxref=GO:0006364,GO:0008168;gene=rsmE;Parent=GCA008085315_00343_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1385,COG:J,KEGG:K09761,RefSeq:WP_005546167.1,SO:0001217,UniParc:UPI0001B9F288,UniRef:UniRef100_UPI0001B9F288,UniRef:UniRef50_P37995,UniRef:UniRef90_A0A5D0ENF2;ec_number=2.1.1.193 contig_2 Pyrodigal gene 68575 69135 . + . ID=GCA008085315_00344_gene;locus_tag=GCA008085315_00344;gene=algH contig_2 Pyrodigal CDS 68575 69135 . + 0 ID=GCA008085315_00344;Name=YqgE/AlgH family protein;locus_tag=GCA008085315_00344;product=YqgE/AlgH family protein;gene=algH;Parent=GCA008085315_00344_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1678,COG:K,SO:0001217,UniRef:UniRef50_Q65VZ3,UniRef:UniRef90_E6L029 contig_2 Pyrodigal gene 69135 69554 . + . ID=GCA008085315_00345_gene;locus_tag=GCA008085315_00345;gene=ruvX contig_2 Pyrodigal CDS 69135 69554 . + 0 ID=GCA008085315_00345;Name=Holliday junction resolvase RuvX;locus_tag=GCA008085315_00345;product=Holliday junction resolvase RuvX;Dbxref=GO:0006364;gene=ruvX;Parent=GCA008085315_00345_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0816,COG:JLK,RefSeq:WP_005568231.1,SO:0001217,UniParc:UPI00022AC328,UniRef:UniRef100_UPI00022AC328,UniRef:UniRef50_P0A8I1,UniRef:UniRef90_A0A142FZX1;ec_number=3.1.21.10 contig_2 Pyrodigal gene 69650 70960 . - . ID=GCA008085315_00346_gene;locus_tag=GCA008085315_00346;gene=eno contig_2 Pyrodigal CDS 69650 70960 . - 0 ID=GCA008085315_00346;Name=phosphopyruvate hydratase;locus_tag=GCA008085315_00346;product=phosphopyruvate hydratase;Dbxref=GO:0000015,GO:0000287,GO:0004634,GO:0005576,GO:0006096,GO:0009986;gene=eno;Parent=GCA008085315_00346_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0148,COG:G,KEGG:K01689,RefSeq:WP_005546172.1,SO:0001217,UniParc:UPI0001B9F238,UniRef:UniRef100_UPI0001B9F238,UniRef:UniRef50_Q8GE63,UniRef:UniRef90_P43806;ec_number=4.2.1.11 contig_2 Pyrodigal gene 71598 72749 . - . ID=GCA008085315_00347_gene;locus_tag=GCA008085315_00347;gene=mnmA contig_2 Pyrodigal CDS 71598 72749 . - 0 ID=GCA008085315_00347;Name=tRNA 2-thiouridine(34) synthase MnmA;locus_tag=GCA008085315_00347;product=tRNA 2-thiouridine(34) synthase MnmA;Dbxref=GO:0002143,GO:0004808,GO:0005737,GO:0006396,GO:0016783;gene=mnmA;Parent=GCA008085315_00347_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0482,COG:J,KEGG:K00566,RefSeq:WP_005546178.1,SO:0001217,UniParc:UPI0001B9F236,UniRef:UniRef100_UPI0001B9F236,UniRef:UniRef50_P25745,UniRef:UniRef90_E6KZQ6;ec_number=2.8.1.13 contig_2 Pyrodigal gene 73010 73267 . - . ID=GCA008085315_00348_gene;locus_tag=GCA008085315_00348;gene=nqrM contig_2 Pyrodigal CDS 73010 73267 . - 0 ID=GCA008085315_00348;Name=(Na+)-NQR maturation NqrM;locus_tag=GCA008085315_00348;product=(Na+)-NQR maturation NqrM;gene=nqrM;Parent=GCA008085315_00348_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K05952,RefSeq:WP_148321040.1,SO:0001217,UniParc:UPI0011DB64A6,UniRef:UniRef100_UPI0011DB64A6,UniRef:UniRef50_P43960,UniRef:UniRef90_UPI0011D703AF contig_2 Pyrodigal gene 73346 74434 . - . ID=GCA008085315_00349_gene;locus_tag=GCA008085315_00349;gene=apbE contig_2 Pyrodigal CDS 73346 74434 . - 0 ID=GCA008085315_00349;Name=FAD:protein FMN transferase;locus_tag=GCA008085315_00349;product=FAD:protein FMN transferase;gene=apbE;Parent=GCA008085315_00349_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1477,COG:HO,KEGG:K03734,RefSeq:WP_148334010.1,SO:0001217,UniParc:UPI0011D6D756,UniRef:UniRef100_UPI0011D6D756,UniRef:UniRef50_P44550,UniRef:UniRef90_A0A336N544;ec_number=2.7.1.180 contig_2 Pyrodigal gene 74585 75820 . - . ID=GCA008085315_00350_gene;locus_tag=GCA008085315_00350;gene=nqrF contig_2 Pyrodigal CDS 74585 75820 . - 0 ID=GCA008085315_00350;Name=NADH:ubiquinone reductase (Na(+)-transporting) subunit F;locus_tag=GCA008085315_00350;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit F;Dbxref=GO:0005886,GO:0006814,GO:0009055,GO:0016020,GO:0016655,GO:0046872,GO:0051537;gene=nqrF;Parent=GCA008085315_00350_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG2871,KEGG:K00351,RefSeq:WP_005546182.1,SO:0001217,UniParc:UPI0001B9F232,UniRef:UniRef100_UPI0001B9F232,UniRef:UniRef50_Q56584,UniRef:UniRef90_O05012;ec_number=7.2.1.1 contig_2 Pyrodigal gene 75832 76428 . - . ID=GCA008085315_00351_gene;locus_tag=GCA008085315_00351;gene=nqrE contig_2 Pyrodigal CDS 75832 76428 . - 0 ID=GCA008085315_00351;Name=NADH:ubiquinone reductase (Na(+)-transporting) subunit E;locus_tag=GCA008085315_00351;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit E;Dbxref=GO:0006814,GO:0016655;gene=nqrE;Parent=GCA008085315_00351_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG2209,KEGG:K00350,RefSeq:WP_005542957.1,SO:0001217,UniParc:UPI0001AADFE6,UniRef:UniRef100_A0A142FZX7,UniRef:UniRef50_Q56589,UniRef:UniRef90_E6KZR1;ec_number=7.2.1.1 contig_2 Pyrodigal gene 76432 77061 . - . ID=GCA008085315_00352_gene;locus_tag=GCA008085315_00352;gene=nqrD contig_2 Pyrodigal CDS 76432 77061 . - 0 ID=GCA008085315_00352;Name=NADH:ubiquinone reductase (Na(+)-transporting) subunit D;locus_tag=GCA008085315_00352;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit D;Dbxref=GO:0016020,GO:0016655;gene=nqrD;Parent=GCA008085315_00352_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1347,KEGG:K00349,RefSeq:WP_005542950.1,SO:0001217,UniParc:UPI0001B9F231,UniRef:UniRef100_A0A142FZX8,UniRef:UniRef50_Q9HZK9,UniRef:UniRef90_A0A1R0EAA9;ec_number=7.2.1.1 contig_2 Pyrodigal gene 77061 77846 . - . ID=GCA008085315_00353_gene;locus_tag=GCA008085315_00353;gene=nqrC contig_2 Pyrodigal CDS 77061 77846 . - 0 ID=GCA008085315_00353;Name=Na(+)-translocating NADH-quinone reductase subunit C;locus_tag=GCA008085315_00353;product=Na(+)-translocating NADH-quinone reductase subunit C;Dbxref=GO:0006814,GO:0016020,GO:0016655;gene=nqrC;Parent=GCA008085315_00353_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG2869,RefSeq:WP_005542948.1,SO:0001217,UniParc:UPI0001B9F230,UniRef:UniRef100_A0A142FZX9,UniRef:UniRef50_Q56582,UniRef:UniRef90_A0A142FZX9 contig_2 Pyrodigal gene 77839 79074 . - . ID=GCA008085315_00354_gene;locus_tag=GCA008085315_00354;gene=nqrB contig_2 Pyrodigal CDS 77839 79074 . - 0 ID=GCA008085315_00354;Name=NADH:ubiquinone reductase (Na(+)-transporting) subunit B;locus_tag=GCA008085315_00354;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit B;Dbxref=GO:0005886,GO:0006814,GO:0010181,GO:0016020,GO:0016655,GO:0022904,GO:0055085;gene=nqrB;Parent=GCA008085315_00354_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1805,RefSeq:WP_005546185.1,SO:0001217,UniParc:UPI0001B9F22F,UniRef:UniRef100_G4AB73,UniRef:UniRef50_Q8ZBZ1,UniRef:UniRef90_O05011;ec_number=7.2.1.1 contig_2 Pyrodigal gene 79077 80417 . - . ID=GCA008085315_00355_gene;locus_tag=GCA008085315_00355;gene=nqrA contig_2 Pyrodigal CDS 79077 80417 . - 0 ID=GCA008085315_00355;Name=Na(+)-translocating NADH-quinone reductase subunit A;locus_tag=GCA008085315_00355;product=Na(+)-translocating NADH-quinone reductase subunit A;Dbxref=GO:0006814,GO:0016655;gene=nqrA;Parent=GCA008085315_00355_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1726,KEGG:K00346,RefSeq:WP_005546187.1,SO:0001217,UniParc:UPI0001B9F22E,UniRef:UniRef100_G4AB72,UniRef:UniRef50_Q9HZK6,UniRef:UniRef90_E6KZR5;ec_number=7.2.1.1 contig_2 Pyrodigal gene 80773 81084 . - . ID=GCA008085315_00356_gene;locus_tag=GCA008085315_00356;gene=bolA contig_2 Pyrodigal CDS 80773 81084 . - 0 ID=GCA008085315_00356;Name=BolA/IbaG family iron-sulfur metabolism protein;locus_tag=GCA008085315_00356;product=BolA/IbaG family iron-sulfur metabolism protein;gene=bolA;Parent=GCA008085315_00356_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0271,COG:KT,RefSeq:WP_005546193.1,SO:0001217,UniParc:UPI0001B9F22B,UniRef:UniRef100_G4AB70,UniRef:UniRef50_A3MYV7,UniRef:UniRef90_A0A142FZY2 contig_2 Pyrodigal gene 81188 81781 . + . ID=GCA008085315_00357_gene;locus_tag=GCA008085315_00357;gene=yajG contig_2 Pyrodigal CDS 81188 81781 . + 0 ID=GCA008085315_00357;Name=Lipoprotein;locus_tag=GCA008085315_00357;product=Lipoprotein;gene=yajG;Parent=GCA008085315_00357_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3056,COG:S,KEGG:K07286,RefSeq:WP_005590416.1,SO:0001217,UniParc:UPI00022BFE1E,UniRef:UniRef100_UPI00022BFE1E,UniRef:UniRef50_P43782,UniRef:UniRef90_A0A5D0ENF6 contig_2 tRNAscan-SE gene 81921 81996 . - . ID=GCA008085315_00358_gene;locus_tag=GCA008085315_00358;gene=trnN contig_2 tRNAscan-SE tRNA 81921 81996 . - . ID=GCA008085315_00358;Name=tRNA-Asn(gtt);locus_tag=GCA008085315_00358;product=tRNA-Asn(gtt);gene=trnN;anti_codon=gtt;amino_acid=Asn;Parent=GCA008085315_00358_gene;inference=profile:tRNAscan:2.0;Note=SO:0000257 contig_2 tRNAscan-SE gene 82001 82076 . - . ID=GCA008085315_00359_gene;locus_tag=GCA008085315_00359;gene=trnF contig_2 tRNAscan-SE tRNA 82001 82076 . - . ID=GCA008085315_00359;Name=tRNA-Phe(gaa);locus_tag=GCA008085315_00359;product=tRNA-Phe(gaa);gene=trnF;anti_codon=gaa;amino_acid=Phe;Parent=GCA008085315_00359_gene;inference=profile:tRNAscan:2.0;Note=SO:0000267 contig_2 Pyrodigal gene 82282 83361 . - . ID=GCA008085315_00360_gene;locus_tag=GCA008085315_00360;gene=mltC contig_2 Pyrodigal CDS 82282 83361 . - 0 ID=GCA008085315_00360;Name=membrane-bound lytic murein transglycosylase MltC;locus_tag=GCA008085315_00360;product=membrane-bound lytic murein transglycosylase MltC;Dbxref=GO:0000270,GO:0008933,GO:0016020;gene=mltC;Parent=GCA008085315_00360_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0741,COG:MU,KEGG:K08306,RefSeq:WP_148321041.1,SO:0001217,UniParc:UPI0011DBA73C,UniRef:UniRef100_UPI0011DBA73C,UniRef:UniRef50_Q9CLB8,UniRef:UniRef90_A0A3S4S2D1;ec_number=4.2.2.29 contig_2 Pyrodigal gene 83364 83642 . - . ID=GCA008085315_00361_gene;locus_tag=GCA008085315_00361;gene=yggX contig_2 Pyrodigal CDS 83364 83642 . - 0 ID=GCA008085315_00361;Name=oxidative damage protection protein;locus_tag=GCA008085315_00361;product=oxidative damage protection protein;Dbxref=GO:0005506,GO:0005829,GO:0034599;gene=yggX;Parent=GCA008085315_00361_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2924,COG:PO,RefSeq:WP_005542927.1,SO:0001217,UniParc:UPI0001B9F227,UniRef:UniRef100_A0A142FZY5,UniRef:UniRef50_P0A8P3,UniRef:UniRef90_A5UDW5 contig_2 Pyrodigal gene 83620 84759 . - . ID=GCA008085315_00362_gene;locus_tag=GCA008085315_00362;gene=mutY contig_2 Pyrodigal CDS 83620 84759 . - 0 ID=GCA008085315_00362;Name=A/G-specific adenine glycosylase;locus_tag=GCA008085315_00362;product=A/G-specific adenine glycosylase;Dbxref=GO:0006281,GO:0019104;gene=mutY;Parent=GCA008085315_00362_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1194,COG:L,KEGG:K03575,RefSeq:WP_005546199.1,SO:0001217,UniParc:UPI00022AC32E,UniRef:UniRef100_UPI00022AC32E,UniRef:UniRef50_A0A5D0ENH3,UniRef:UniRef90_A0A5D0ENH3;ec_number=3.2.2.31 contig_2 Pyrodigal gene 84976 85743 . + . ID=GCA008085315_00363_gene;locus_tag=GCA008085315_00363;gene=trmB contig_2 Pyrodigal CDS 84976 85743 . + 0 ID=GCA008085315_00363;Name=tRNA (guanosine(46)-N7)-methyltransferase TrmB;locus_tag=GCA008085315_00363;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;Dbxref=GO:0006400,GO:0008176;gene=trmB;Parent=GCA008085315_00363_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0220,COG:J,RefSeq:WP_005546201.1,SO:0001217,UniParc:UPI0001B9F225,UniRef:UniRef100_UPI0001B9F225,UniRef:UniRef50_P44648,UniRef:UniRef90_U1SAT2;ec_number=2.1.1.33 contig_2 Pyrodigal gene 85774 86115 . + . ID=GCA008085315_00364_gene;locus_tag=GCA008085315_00364;gene=yggL contig_2 Pyrodigal CDS 85774 86115 . + 0 ID=GCA008085315_00364;Name=DUF469 domain-containing protein;locus_tag=GCA008085315_00364;product=DUF469 domain-containing protein;gene=yggL;Parent=GCA008085315_00364_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3171,COG:S,KEGG:K09923,RefSeq:WP_148321042.1,SO:0001217,UniParc:UPI0011D424C7,UniRef:UniRef100_UPI0011D424C7,UniRef:UniRef50_P44649,UniRef:UniRef90_E6KZS2 contig_2 Pyrodigal gene 86334 87332 . + . ID=GCA008085315_00365_gene;locus_tag=GCA008085315_00365;gene=afuA contig_2 Pyrodigal CDS 86334 87332 . + 0 ID=GCA008085315_00365;Name=Iron ABC superfamily ATP binding cassette transporter%2C binding protein;locus_tag=GCA008085315_00365;product=Iron ABC superfamily ATP binding cassette transporter%2C binding protein;gene=afuA;Parent=GCA008085315_00365_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1840,COG:GH,KEGG:K02012,RefSeq:WP_005546204.1,SO:0001217,UniParc:UPI0001B9F223,UniRef:UniRef100_UPI0001B9F223,UniRef:UniRef50_P35755,UniRef:UniRef90_E6KZS6 contig_2 Pyrodigal gene 87413 88933 . + . ID=GCA008085315_00366_gene;locus_tag=GCA008085315_00366;gene=fbpB contig_2 Pyrodigal CDS 87413 88933 . + 0 ID=GCA008085315_00366;Name=Fe3+ dicitrate ABC transporter permease;locus_tag=GCA008085315_00366;product=Fe3+ dicitrate ABC transporter permease;gene=fbpB;Parent=GCA008085315_00366_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1178,COG:P,KEGG:K02011,RefSeq:WP_005546207.1,SO:0001217,UniParc:UPI0001B9F222,UniRef:UniRef100_UPI0001B9F222,UniRef:UniRef50_P71338,UniRef:UniRef90_A0A5D0ENG3 contig_2 Pyrodigal gene 88949 90007 . + . ID=GCA008085315_00367_gene;locus_tag=GCA008085315_00367;gene=potA contig_2 Pyrodigal CDS 88949 90007 . + 0 ID=GCA008085315_00367;Name=ABC transporter ATP-binding protein;locus_tag=GCA008085315_00367;product=ABC transporter ATP-binding protein;gene=potA;Parent=GCA008085315_00367_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3842,COG:E,RefSeq:WP_005546209.1,SO:0001217,UniParc:UPI0001B9F221,UniRef:UniRef100_UPI0001B9F221,UniRef:UniRef50_P44513,UniRef:UniRef90_A0A142FZZ0 contig_2 Pyrodigal gene 89993 90997 . - . ID=GCA008085315_00368_gene;locus_tag=GCA008085315_00368;gene=dusC contig_2 Pyrodigal CDS 89993 90997 . - 0 ID=GCA008085315_00368;Name=tRNA dihydrouridine(16) synthase DusC;locus_tag=GCA008085315_00368;product=tRNA dihydrouridine(16) synthase DusC;Dbxref=GO:0002943,GO:0017150,GO:0050660;gene=dusC;Parent=GCA008085315_00368_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K05541,RefSeq:WP_005574291.1,SO:0001217,UniParc:UPI0001B9F220,UniRef:UniRef100_UPI0001B9F220,UniRef:UniRef50_P33371,UniRef:UniRef90_G4AB59;ec_number=1.3.1.- contig_2 Pyrodigal gene 91001 91876 . - . ID=GCA008085315_00369_gene;locus_tag=GCA008085315_00369;gene=djlA contig_2 Pyrodigal CDS 91001 91876 . - 0 ID=GCA008085315_00369;Name=co-chaperone DjlA;locus_tag=GCA008085315_00369;product=co-chaperone DjlA;Dbxref=GO:0051087;gene=djlA;Parent=GCA008085315_00369_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1076,COG:O,RefSeq:WP_005546214.1,SO:0001217,UniParc:UPI0001B9F21F,UniRef:UniRef100_UPI0001B9F21F,UniRef:UniRef50_Q65RA1,UniRef:UniRef90_A0A5D0KXI5 contig_2 Pyrodigal gene 91958 92602 . - . ID=GCA008085315_00370_gene;locus_tag=GCA008085315_00370;gene=pyrE contig_2 Pyrodigal CDS 91958 92602 . - 0 ID=GCA008085315_00370;Name=Orotate phosphoribosyltransferase;locus_tag=GCA008085315_00370;product=Orotate phosphoribosyltransferase;gene=pyrE;Parent=GCA008085315_00370_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0461,COG:F,RefSeq:WP_005546215.1,SO:0001217,UniParc:UPI0001B9F21E,UniRef:UniRef100_UPI0001B9F21E,UniRef:UniRef50_P50587,UniRef:UniRef90_A0A142FZZ3 contig_2 Pyrodigal gene 92612 93328 . - . ID=GCA008085315_00371_gene;locus_tag=GCA008085315_00371;gene=rph contig_2 Pyrodigal CDS 92612 93328 . - 0 ID=GCA008085315_00371;Name=ribonuclease PH;locus_tag=GCA008085315_00371;product=ribonuclease PH;Dbxref=GO:0000049,GO:0008033,GO:0009022;gene=rph;Parent=GCA008085315_00371_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0689,COG:J,KEGG:K00989,RefSeq:WP_005568249.1,SO:0001217,UniParc:UPI0001B9F21D,UniRef:UniRef100_UPI0001B9F21D,UniRef:UniRef50_P50597,UniRef:UniRef90_E6KZT4;ec_number=2.7.7.56 contig_2 Pyrodigal gene 93446 94309 . + . ID=GCA008085315_00372_gene;locus_tag=GCA008085315_00372;gene=yicC contig_2 Pyrodigal CDS 93446 94309 . + 0 ID=GCA008085315_00372;Name=YicC family protein;locus_tag=GCA008085315_00372;product=YicC family protein;gene=yicC;Parent=GCA008085315_00372_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1561,COG:J,RefSeq:WP_005546220.1,SO:0001217,UniParc:UPI0001B9F21C,UniRef:UniRef100_UPI0001B9F21C,UniRef:UniRef50_P23839,UniRef:UniRef90_G4AB54 contig_2 Pyrodigal gene 94337 95224 . + . ID=GCA008085315_00373_gene;locus_tag=GCA008085315_00373;gene=ygfZ contig_2 Pyrodigal CDS 94337 95224 . + 0 ID=GCA008085315_00373;Name=tRNA-modifying protein YgfZ;locus_tag=GCA008085315_00373;product=tRNA-modifying protein YgfZ;Dbxref=GO:0005542,GO:0009451;gene=ygfZ;Parent=GCA008085315_00373_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0354,COG:O,KEGG:K06980,RefSeq:WP_005546222.1,SO:0001217,UniParc:UPI0001B9F21B,UniRef:UniRef100_UPI0001B9F21B,UniRef:UniRef50_P44000,UniRef:UniRef90_A0A142FZZ6 contig_2 Pyrodigal gene 95225 95494 . + . ID=GCA008085315_00374_gene;locus_tag=GCA008085315_00374 contig_2 Pyrodigal CDS 95225 95494 . + 0 ID=GCA008085315_00374;Name=hypothetical protein;locus_tag=GCA008085315_00374;product=hypothetical protein;Parent=GCA008085315_00374_gene;inference=ab initio prediction:Pyrodigal:3.5 contig_2 Infernal gene 95698 95784 . + . ID=GCA008085315_00375_gene;locus_tag=GCA008085315_00375;gene=t44 contig_2 Infernal ncRNA 95698 95784 1.4e-08 + . ID=GCA008085315_00375;Name=t44 RNA;locus_tag=GCA008085315_00375;product=t44 RNA;Dbxref=RFAM:RF00127;Parent=GCA008085315_00375_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00127 contig_2 Pyrodigal gene 95807 96529 . + . ID=GCA008085315_00376_gene;locus_tag=GCA008085315_00376;gene=rpsB contig_2 Pyrodigal CDS 95807 96529 . + 0 ID=GCA008085315_00376;Name=30S ribosomal protein S2;locus_tag=GCA008085315_00376;product=30S ribosomal protein S2;Dbxref=GO:0003735,GO:0006412,GO:0015935,GO:0022627;gene=rpsB;Parent=GCA008085315_00376_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0052,COG:J,KEGG:K02967,RefSeq:WP_005542886.1,SO:0001217,UniParc:UPI0001B9F219,UniRef:UniRef100_A0A142FZZ7,UniRef:UniRef50_P44371,UniRef:UniRef90_P44371 contig_2 Pyrodigal gene 96684 97532 . + . ID=GCA008085315_00377_gene;locus_tag=GCA008085315_00377;gene=tsf contig_2 Pyrodigal CDS 96684 97532 . + 0 ID=GCA008085315_00377;Name=translation elongation factor Ts;locus_tag=GCA008085315_00377;product=translation elongation factor Ts;Dbxref=GO:0003746,GO:0006414;gene=tsf;Parent=GCA008085315_00377_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0264,COG:J,RefSeq:WP_005546227.1,SO:0001217,UniParc:UPI0001B9F218,UniRef:UniRef100_UPI0001B9F218,UniRef:UniRef50_P43894,UniRef:UniRef90_E6KZU3 contig_2 Pyrodigal gene 97829 98515 . + . ID=GCA008085315_00378_gene;locus_tag=GCA008085315_00378;gene=recO contig_2 Pyrodigal CDS 97829 98515 . + 0 ID=GCA008085315_00378;Name=DNA repair protein RecO;locus_tag=GCA008085315_00378;product=DNA repair protein RecO;Dbxref=GO:0003677,GO:0006281,GO:0006310;gene=recO;Parent=GCA008085315_00378_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1381,COG:L,KEGG:K03584,RefSeq:WP_005546229.1,SO:0001217,UniParc:UPI0001B9F217,UniRef:UniRef100_UPI0001B9F217,UniRef:UniRef50_P0A7H3,UniRef:UniRef90_E6KZU5 contig_2 Pyrodigal gene 98517 99833 . + . ID=GCA008085315_00379_gene;locus_tag=GCA008085315_00379;gene=rlmD contig_2 Pyrodigal CDS 98517 99833 . + 0 ID=GCA008085315_00379;Name=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;locus_tag=GCA008085315_00379;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;Dbxref=GO:0006396,GO:0008173;gene=rlmD;Parent=GCA008085315_00379_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2265,COG:J,KEGG:K03215,RefSeq:WP_148321044.1,SO:0001217,UniParc:UPI0011D75697,UniRef:UniRef100_UPI0011D75697,UniRef:UniRef50_Q9CJX3,UniRef:UniRef90_A0A5D0ENG4;ec_number=2.1.1.190 contig_2 Pyrodigal gene 99843 102074 . + . ID=GCA008085315_00380_gene;locus_tag=GCA008085315_00380;gene=relA contig_2 Pyrodigal CDS 99843 102074 . + 0 ID=GCA008085315_00380;Name=GTP diphosphokinase;locus_tag=GCA008085315_00380;product=GTP diphosphokinase;Dbxref=GO:0015969;gene=relA;Parent=GCA008085315_00380_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0317,COG:TK,RefSeq:WP_005546233.1,SO:0001217,UniParc:UPI0001B9F215,UniRef:UniRef100_UPI0001B9F215,UniRef:UniRef50_P55133,UniRef:UniRef90_E6KZU7;ec_number=2.7.6.5 contig_2 Pyrodigal gene 102099 102455 . + . ID=GCA008085315_00381_gene;locus_tag=GCA008085315_00381;gene=dgkA contig_2 Pyrodigal CDS 102099 102455 . + 0 ID=GCA008085315_00381;Name=Diacylglycerol kinase;locus_tag=GCA008085315_00381;product=Diacylglycerol kinase;gene=dgkA;Parent=GCA008085315_00381_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0818,COG:I,RefSeq:WP_005542871.1,SO:0001217,UniParc:UPI0001B9F214,UniRef:UniRef100_A0A142G002,UniRef:UniRef50_A0A149VQF3,UniRef:UniRef90_E6KZU8 ##sequence-region contig_3 1 78890 contig_3 Bakta region 1 78890 . + . ID=contig_3;Name=contig_3 contig_3 Infernal gene 68 183 . + . ID=GCA008085315_00382_gene;locus_tag=GCA008085315_00382;gene=rrf contig_3 Infernal rRNA 68 183 1e-14 + . ID=GCA008085315_00382;Name=5S ribosomal RNA;locus_tag=GCA008085315_00382;gene=rrf;product=5S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00001;Parent=GCA008085315_00382_gene;Note=KEGG:K01985,SO:0000652;inference=profile:Rfam:RF00001 contig_3 tRNAscan-SE gene 192 268 . + . ID=GCA008085315_00383_gene;locus_tag=GCA008085315_00383;gene=trnD contig_3 tRNAscan-SE tRNA 192 268 . + . ID=GCA008085315_00383;Name=tRNA-Asp(gtc);locus_tag=GCA008085315_00383;product=tRNA-Asp(gtc);gene=trnD;anti_codon=gtc;amino_acid=Asp;Parent=GCA008085315_00383_gene;inference=profile:tRNAscan:2.0;Note=SO:0000256 contig_3 tRNAscan-SE gene 303 378 . + . ID=GCA008085315_00384_gene;locus_tag=GCA008085315_00384;gene=trnW contig_3 tRNAscan-SE tRNA 303 378 . + . ID=GCA008085315_00384;Name=tRNA-Trp(cca);locus_tag=GCA008085315_00384;product=tRNA-Trp(cca);gene=trnW;anti_codon=cca;amino_acid=Trp;Parent=GCA008085315_00384_gene;inference=profile:tRNAscan:2.0;Note=SO:0000271 contig_3 Pyrodigal gene 667 1209 . - . ID=GCA008085315_00385_gene;locus_tag=GCA008085315_00385 contig_3 Pyrodigal CDS 667 1209 . - 0 ID=GCA008085315_00385;Name=DDE-type integrase/transposase/recombinase;locus_tag=GCA008085315_00385;product=DDE-type integrase/transposase/recombinase;Parent=GCA008085315_00385_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_162200147.1,SO:0001217,UniParc:UPI0002FEBC0C,UniRef:UniRef100_UPI00022ACCD9,UniRef:UniRef50_UPI0007974519,UniRef:UniRef90_UPI0002AC5924 contig_3 Pyrodigal gene 1674 2258 . + . ID=GCA008085315_00386_gene;locus_tag=GCA008085315_00386;gene=pth contig_3 Pyrodigal CDS 1674 2258 . + 0 ID=GCA008085315_00386;Name=aminoacyl-tRNA hydrolase;locus_tag=GCA008085315_00386;product=aminoacyl-tRNA hydrolase;Dbxref=GO:0004045;gene=pth;Parent=GCA008085315_00386_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0193,COG:J,RefSeq:WP_005548480.1,SO:0001217,UniParc:UPI00022ACCDA,UniRef:UniRef100_UPI00022ACCDA,UniRef:UniRef50_P0A7D1,UniRef:UniRef90_A0A142FZ46;ec_number=3.1.1.29 contig_3 Pyrodigal gene 2447 3538 . + . ID=GCA008085315_00387_gene;locus_tag=GCA008085315_00387;gene=ychF contig_3 Pyrodigal CDS 2447 3538 . + 0 ID=GCA008085315_00387;Name=redox-regulated ATPase YchF;locus_tag=GCA008085315_00387;product=redox-regulated ATPase YchF;Dbxref=GO:0005524,GO:0005525,GO:0005737,GO:0016887,GO:0043023,GO:0046872;gene=ychF;Parent=GCA008085315_00387_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0012,COG:J,RefSeq:WP_005548478.1,SO:0001217,UniParc:UPI0001B9F64E,UniRef:UniRef100_UPI0001B9F64E,UniRef:UniRef50_P44681,UniRef:UniRef90_P44681 contig_3 Pyrodigal gene 3847 4428 . + . ID=GCA008085315_00388_gene;locus_tag=GCA008085315_00388;gene=udg4 contig_3 Pyrodigal CDS 3847 4428 . + 0 ID=GCA008085315_00388;Name=Uracil-DNA glycosylase;locus_tag=GCA008085315_00388;product=Uracil-DNA glycosylase;gene=udg4;Parent=GCA008085315_00388_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1573,COG:L,RefSeq:WP_005548476.1,SO:0001217,UniParc:UPI0001B9F64D,UniRef:UniRef100_UPI0001B9F64D,UniRef:UniRef50_O86222,UniRef:UniRef90_A0A142FZ48 contig_3 Pyrodigal gene 4870 5817 . - . ID=GCA008085315_00389_gene;locus_tag=GCA008085315_00389;gene=cysK contig_3 Pyrodigal CDS 4870 5817 . - 0 ID=GCA008085315_00389;Name=cysteine synthase A;locus_tag=GCA008085315_00389;product=cysteine synthase A;Dbxref=GO:0004124,GO:0006535;gene=cysK;Parent=GCA008085315_00389_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0031,COG:E,RefSeq:WP_148334011.1,SO:0001217,UniParc:UPI0011DBCABF,UniRef:UniRef100_UPI0011DBCABF,UniRef:UniRef50_A0A2X0R9F5,UniRef:UniRef90_A0A142FZ49;ec_number=2.5.1.47 contig_3 Pyrodigal gene 5918 6742 . - . ID=GCA008085315_00390_gene;locus_tag=GCA008085315_00390;gene=cysZ contig_3 Pyrodigal CDS 5918 6742 . - 0 ID=GCA008085315_00390;Name=sulfate transporter CysZ;locus_tag=GCA008085315_00390;product=sulfate transporter CysZ;Dbxref=GO:0000103,GO:0005886,GO:0015116;gene=cysZ;Parent=GCA008085315_00390_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2981,COG:EP,KEGG:K06203,RefSeq:WP_148321476.1,SO:0001217,UniParc:UPI0011D53509,UniRef:UniRef100_UPI0011D53509,UniRef:UniRef50_P45039,UniRef:UniRef90_A0A142FZ50 contig_3 Pyrodigal gene 6882 7919 . + . ID=GCA008085315_00391_gene;locus_tag=GCA008085315_00391;gene=zipA contig_3 Pyrodigal CDS 6882 7919 . + 0 ID=GCA008085315_00391;Name=cell division protein ZipA;locus_tag=GCA008085315_00391;product=cell division protein ZipA;Dbxref=GO:0000917,GO:0005515,GO:0016020;gene=zipA;Parent=GCA008085315_00391_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3115,COG:D,KEGG:K03528,RefSeq:WP_005568387.1,SO:0001217,UniParc:UPI00022ADBC1,UniRef:UniRef100_UPI00022ADBC1,UniRef:UniRef50_A0A142FZ51,UniRef:UniRef90_A0A142FZ51 contig_3 Pyrodigal gene 8021 10033 . + . ID=GCA008085315_00392_gene;locus_tag=GCA008085315_00392;gene=ligA contig_3 Pyrodigal CDS 8021 10033 . + 0 ID=GCA008085315_00392;Name=NAD-dependent DNA ligase LigA;locus_tag=GCA008085315_00392;product=NAD-dependent DNA ligase LigA;Dbxref=GO:0003677,GO:0003911,GO:0006260,GO:0006281;gene=ligA;Parent=GCA008085315_00392_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0272,COG:L,RefSeq:WP_005548464.1,SO:0001217,UniParc:UPI0001B9F647,UniRef:UniRef100_UPI0001B9F647,UniRef:UniRef50_P43813,UniRef:UniRef90_UPI001E34B2FE;ec_number=6.5.1.2 contig_3 Pyrodigal gene 10101 10649 . - . ID=GCA008085315_00393_gene;locus_tag=GCA008085315_00393;gene=tdk contig_3 Pyrodigal CDS 10101 10649 . - 0 ID=GCA008085315_00393;Name=thymidine kinase;locus_tag=GCA008085315_00393;product=thymidine kinase;Dbxref=GO:0004797,GO:0005524;gene=tdk;Parent=GCA008085315_00393_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1435,COG:F,KEGG:K00857,SO:0001217,UniRef:UniRef50_Q7CXF9,UniRef:UniRef90_E6KZG9;ec_number=2.7.1.21 contig_3 Pyrodigal gene 10682 10915 . - . ID=GCA008085315_00394_gene;locus_tag=GCA008085315_00394 contig_3 Pyrodigal CDS 10682 10915 . - 0 ID=GCA008085315_00394;Name=putative protein PM1237;locus_tag=GCA008085315_00394;product=putative protein PM1237;Parent=GCA008085315_00394_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005548460.1,SO:0001217,UniParc:UPI0001B9F645,UniRef:UniRef100_G4A8F6,UniRef:UniRef50_Q9CLJ2,UniRef:UniRef90_A0A142FZ54 contig_3 Pyrodigal gene 10980 12008 . - . ID=GCA008085315_00395_gene;locus_tag=GCA008085315_00395;gene=tsaD contig_3 Pyrodigal CDS 10980 12008 . - 0 ID=GCA008085315_00395;Name=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;locus_tag=GCA008085315_00395;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;Dbxref=GO:0002949;gene=tsaD;Parent=GCA008085315_00395_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0533,COG:J,RefSeq:WP_148321058.1,SO:0001217,UniParc:UPI0011D869A0,UniRef:UniRef100_UPI0011D869A0,UniRef:UniRef50_P43764,UniRef:UniRef90_U1S6N1;ec_number=2.3.1.234 contig_3 Pyrodigal gene 12233 12448 . + . ID=GCA008085315_00396_gene;locus_tag=GCA008085315_00396;gene=rpsU contig_3 Pyrodigal CDS 12233 12448 . + 0 ID=GCA008085315_00396;Name=30S ribosomal protein S21;locus_tag=GCA008085315_00396;product=30S ribosomal protein S21;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:1990904;gene=rpsU;Parent=GCA008085315_00396_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0828,COG:J,RefSeq:WP_005537983.1,SO:0001217,UniParc:UPI0001B9F642,UniRef:UniRef100_A0A142FZ56,UniRef:UniRef50_P44386,UniRef:UniRef90_P44386 contig_3 Pyrodigal gene 12570 14327 . + . ID=GCA008085315_00397_gene;locus_tag=GCA008085315_00397;gene=dnaG contig_3 Pyrodigal CDS 12570 14327 . + 0 ID=GCA008085315_00397;Name=DNA primase;locus_tag=GCA008085315_00397;product=DNA primase;gene=dnaG;Parent=GCA008085315_00397_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0358,COG:L,KEGG:K02316,RefSeq:WP_148321057.1,SO:0001217,UniParc:UPI0011D8FD41,UniRef:UniRef100_UPI0011D8FD41,UniRef:UniRef50_Q08346,UniRef:UniRef90_A0A142FZ57;ec_number=2.7.7.101 contig_3 Pyrodigal gene 14403 16253 . + . ID=GCA008085315_00398_gene;locus_tag=GCA008085315_00398;gene=rpoD contig_3 Pyrodigal CDS 14403 16253 . + 0 ID=GCA008085315_00398;Name=RNA polymerase sigma factor RpoD;locus_tag=GCA008085315_00398;product=RNA polymerase sigma factor RpoD;Dbxref=GO:0003700,GO:0006355,GO:0016987;gene=rpoD;Parent=GCA008085315_00398_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0568,COG:K,KEGG:K03086,SO:0001217,UniRef:UniRef50_P00579,UniRef:UniRef90_G4A8F1 contig_3 Pyrodigal gene 16315 18732 . - . ID=GCA008085315_00399_gene;locus_tag=GCA008085315_00399;gene=lon contig_3 Pyrodigal CDS 16315 18732 . - 0 ID=GCA008085315_00399;Name=endopeptidase La;locus_tag=GCA008085315_00399;product=endopeptidase La;Dbxref=GO:0004176,GO:0004252,GO:0006508,GO:0016887,GO:0043565;gene=lon;Parent=GCA008085315_00399_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0466,COG:O,SO:0001217,UniRef:UniRef50_P0A9M0,UniRef:UniRef90_U1SAV1;ec_number=3.4.21.53 contig_3 tRNAscan-SE gene 18919 19008 . - . ID=GCA008085315_00400_gene;locus_tag=GCA008085315_00400;gene=trnS contig_3 tRNAscan-SE tRNA 18919 19008 . - . ID=GCA008085315_00400;Name=tRNA-Ser(gga);locus_tag=GCA008085315_00400;product=tRNA-Ser(gga);gene=trnS;anti_codon=gga;amino_acid=Ser;Parent=GCA008085315_00400_gene;inference=profile:tRNAscan:2.0;Note=SO:0000269 contig_3 Pyrodigal gene 19163 20917 . + . ID=GCA008085315_00401_gene;locus_tag=GCA008085315_00401;gene=dauA contig_3 Pyrodigal CDS 19163 20917 . + 0 ID=GCA008085315_00401;Name=C4-dicarboxylic acid transporter DauA;locus_tag=GCA008085315_00401;product=C4-dicarboxylic acid transporter DauA;gene=dauA;Parent=GCA008085315_00401_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0659,COG:P,KEGG:K03321,RefSeq:WP_005548445.1,SO:0001217,UniParc:UPI0001B9F63E,UniRef:UniRef100_UPI0001B9F63E,UniRef:UniRef50_P0AFR2,UniRef:UniRef90_A0A5D0ELN5 contig_3 Pyrodigal gene 20943 21734 . - . ID=GCA008085315_00402_gene;locus_tag=GCA008085315_00402;gene=rhaT contig_3 Pyrodigal CDS 20943 21734 . - 0 ID=GCA008085315_00402;Name=DMT family transporter;locus_tag=GCA008085315_00402;product=DMT family transporter;gene=rhaT;Parent=GCA008085315_00402_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0697,COG:GER,SO:0001217,UniRef:UniRef50_Q65V68,UniRef:UniRef90_A0A5D0ELS2 contig_3 Pyrodigal gene 21890 22213 . - . ID=GCA008085315_00403_gene;locus_tag=GCA008085315_00403 contig_3 Pyrodigal CDS 21890 22213 . - 0 ID=GCA008085315_00403;Name=hypothetical protein;locus_tag=GCA008085315_00403;product=hypothetical protein;Parent=GCA008085315_00403_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005588308.1,SO:0001217,UniParc:UPI0001B9F63C,UniRef:UniRef100_UPI0001B9F63C,UniRef:UniRef50_UPI0001B9F63C,UniRef:UniRef90_UPI0001B9F63C contig_3 Pyrodigal gene 22263 22820 . - . ID=GCA008085315_00404_gene;locus_tag=GCA008085315_00404 contig_3 Pyrodigal CDS 22263 22820 . - 0 ID=GCA008085315_00404;Name=hypothetical protein;locus_tag=GCA008085315_00404;product=hypothetical protein;Parent=GCA008085315_00404_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005568396.1,SO:0001217,UniParc:UPI0001B9F63B,UniRef:UniRef100_UPI0001B9F63B,UniRef:UniRef50_UPI0004B9D1E9,UniRef:UniRef90_UPI0001B9F63B contig_3 Pyrodigal gene 22858 24042 . - . ID=GCA008085315_00405_gene;locus_tag=GCA008085315_00405;gene=uxuA contig_3 Pyrodigal CDS 22858 24042 . - 0 ID=GCA008085315_00405;Name=mannonate dehydratase;locus_tag=GCA008085315_00405;product=mannonate dehydratase;Dbxref=GO:0006064,GO:0008198,GO:0008927,GO:0030145,GO:0042840;gene=uxuA;Parent=GCA008085315_00405_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1312,COG:G,KEGG:K01686,RefSeq:WP_148321056.1,SO:0001217,UniParc:UPI0011D57978,UniRef:UniRef100_UPI0011D57978,UniRef:UniRef50_P24215,UniRef:UniRef90_P44488;ec_number=4.2.1.8 contig_3 Pyrodigal gene 24062 24817 . - . ID=GCA008085315_00406_gene;locus_tag=GCA008085315_00406;gene=fadR contig_3 Pyrodigal CDS 24062 24817 . - 0 ID=GCA008085315_00406;Name=D-mannonate oxidoreductase;locus_tag=GCA008085315_00406;product=D-mannonate oxidoreductase;gene=fadR;Parent=GCA008085315_00406_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2186,COG:K,KEGG:K13637,RefSeq:WP_005539311.1,SO:0001217,UniParc:UPI0001B9F639,UniRef:UniRef100_A0A142FZ21,UniRef:UniRef50_P44487,UniRef:UniRef90_A5UFM3 contig_3 Pyrodigal gene 24832 25893 . - . ID=GCA008085315_00407_gene;locus_tag=GCA008085315_00407 contig_3 Pyrodigal CDS 24832 25893 . - 0 ID=GCA008085315_00407;Name=hypothetical protein;locus_tag=GCA008085315_00407;product=hypothetical protein;Parent=GCA008085315_00407_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=PFAM:PF01055.32,PFAM:PF21365.3 contig_3 Pyrodigal gene 26046 27092 . - . ID=GCA008085315_00408_gene;locus_tag=GCA008085315_00408;gene=fepB contig_3 Pyrodigal CDS 26046 27092 . - 0 ID=GCA008085315_00408;Name=ABC transporter substrate-binding protein;locus_tag=GCA008085315_00408;product=ABC transporter substrate-binding protein;gene=fepB;Parent=GCA008085315_00408_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0614,COG:P,RefSeq:WP_005568412.1,SO:0001217,UniParc:UPI0001B9F636,UniRef:UniRef100_UPI0001B9F636,UniRef:UniRef50_P44206,UniRef:UniRef90_A0A142FZ28 contig_3 Pyrodigal gene 27402 28634 . - . ID=GCA008085315_00409_gene;locus_tag=GCA008085315_00409;gene=serA contig_3 Pyrodigal CDS 27402 28634 . - 0 ID=GCA008085315_00409;Name=phosphoglycerate dehydrogenase;locus_tag=GCA008085315_00409;product=phosphoglycerate dehydrogenase;Dbxref=GO:0004617,GO:0006564,GO:0016616,GO:0051287;gene=serA;Parent=GCA008085315_00409_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0111,COG:H,RefSeq:WP_148334013.1,SO:0001217,UniParc:UPI0011D2F829,UniRef:UniRef100_UPI0011D2F829,UniRef:UniRef50_P0A9T0,UniRef:UniRef90_P43885;ec_number=1.1.1.95 contig_3 Pyrodigal gene 28654 29310 . - . ID=GCA008085315_00410_gene;locus_tag=GCA008085315_00410;gene=rpiA contig_3 Pyrodigal CDS 28654 29310 . - 0 ID=GCA008085315_00410;Name=ribose-5-phosphate isomerase RpiA;locus_tag=GCA008085315_00410;product=ribose-5-phosphate isomerase RpiA;Dbxref=GO:0004751,GO:0009052;gene=rpiA;Parent=GCA008085315_00410_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0120,COG:G,KEGG:K01807,RefSeq:WP_005548427.1,SO:0001217,UniParc:UPI0001B9F5C7,UniRef:UniRef100_UPI0001B9F5C7,UniRef:UniRef50_P57961,UniRef:UniRef90_A0A5D0EJW1;ec_number=5.3.1.6 contig_3 Pyrodigal gene 29409 30578 . - . ID=GCA008085315_00411_gene;locus_tag=GCA008085315_00411;gene=hemW contig_3 Pyrodigal CDS 29409 30578 . - 0 ID=GCA008085315_00411;Name=radical SAM family heme chaperone HemW;locus_tag=GCA008085315_00411;product=radical SAM family heme chaperone HemW;Dbxref=GO:0005737,GO:0006779,GO:0051539,GO:0051989;gene=hemW;Parent=GCA008085315_00411_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0635,COG:H,RefSeq:WP_005573619.1,SO:0001217,UniParc:UPI0001B9F5C6,UniRef:UniRef100_UPI0001B9F5C6,UniRef:UniRef50_P52062,UniRef:UniRef90_A0A142FZ31 contig_3 Pyrodigal gene 30578 30901 . - . ID=GCA008085315_00412_gene;locus_tag=GCA008085315_00412;gene=ybjQ contig_3 Pyrodigal CDS 30578 30901 . - 0 ID=GCA008085315_00412;Name=UPF0145 protein HMPREF9064_1548;locus_tag=GCA008085315_00412;product=UPF0145 protein HMPREF9064_1548;gene=ybjQ;Parent=GCA008085315_00412_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0393,COG:S,RefSeq:WP_005548424.1,SO:0001217,UniParc:UPI0001B9F5C5,UniRef:UniRef100_UPI0001B9F5C5,UniRef:UniRef50_Q8A295,UniRef:UniRef90_E6KZK6 contig_3 Pyrodigal gene 30940 31620 . - . ID=GCA008085315_00413_gene;locus_tag=GCA008085315_00413;gene=rdgB contig_3 Pyrodigal CDS 30940 31620 . - 0 ID=GCA008085315_00413;Name=RdgB/HAM1 family non-canonical purine NTP pyrophosphatase;locus_tag=GCA008085315_00413;product=RdgB/HAM1 family non-canonical purine NTP pyrophosphatase;Dbxref=GO:0006281,GO:0035870,GO:0036222;gene=rdgB;Parent=GCA008085315_00413_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0127,COG:F,KEGG:K01519,SO:0001217,UniRef:UniRef50_Q8ZHF4,UniRef:UniRef90_A0A5D0EKH6;ec_number=3.6.1.66 contig_3 Pyrodigal gene 31646 31975 . - . ID=GCA008085315_00414_gene;locus_tag=GCA008085315_00414;gene=comE contig_3 Pyrodigal CDS 31646 31975 . - 0 ID=GCA008085315_00414;Name=Competence protein ComE;locus_tag=GCA008085315_00414;product=Competence protein ComE;gene=comE;Parent=GCA008085315_00414_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1555,COG:L,RefSeq:WP_005548420.1,SO:0001217,UniParc:UPI0001B9F5C3,UniRef:UniRef100_UPI0001B9F5C3,UniRef:UniRef50_M2VJH6,UniRef:UniRef90_A0A142FZ34 contig_3 Pyrodigal gene 32265 33152 . - . ID=GCA008085315_00415_gene;locus_tag=GCA008085315_00415;gene=hflC contig_3 Pyrodigal CDS 32265 33152 . - 0 ID=GCA008085315_00415;Name=protease modulator HflC;locus_tag=GCA008085315_00415;product=protease modulator HflC;gene=hflC;Parent=GCA008085315_00415_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0330,COG:O,RefSeq:WP_005548417.1,SO:0001217,UniParc:UPI0001B9F5C1,UniRef:UniRef100_UPI0001B9F5C1,UniRef:UniRef50_P0ABC3,UniRef:UniRef90_E6KW77;ec_number=3.4.24.- contig_3 Pyrodigal gene 33152 34405 . - . ID=GCA008085315_00416_gene;locus_tag=GCA008085315_00416;gene=hflK contig_3 Pyrodigal CDS 33152 34405 . - 0 ID=GCA008085315_00416;Name=FtsH protease activity modulator HflK;locus_tag=GCA008085315_00416;product=FtsH protease activity modulator HflK;Dbxref=GO:0016020,GO:0045861;gene=hflK;Parent=GCA008085315_00416_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0330,COG:O,RefSeq:WP_148321055.1,SO:0001217,UniParc:UPI0011DA8FAA,UniRef:UniRef100_UPI0011DA8FAA,UniRef:UniRef50_P44546,UniRef:UniRef90_A0A142FYR2 contig_3 Pyrodigal gene 34501 35220 . - . ID=GCA008085315_00417_gene;locus_tag=GCA008085315_00417;gene=sfp contig_3 Pyrodigal CDS 34501 35220 . - 0 ID=GCA008085315_00417;Name=4'-phosphopantetheinyl transferase;locus_tag=GCA008085315_00417;product=4'-phosphopantetheinyl transferase;gene=sfp;Parent=GCA008085315_00417_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2091,COG:H,RefSeq:WP_005548412.1,SO:0001217,UniParc:UPI0001B9F5BF,UniRef:UniRef100_UPI0001B9F5BF,UniRef:UniRef50_P43954,UniRef:UniRef90_A0A142FYR1 contig_3 Pyrodigal gene 35279 36553 . - . ID=GCA008085315_00418_gene;locus_tag=GCA008085315_00418;gene=thrC contig_3 Pyrodigal CDS 35279 36553 . - 0 ID=GCA008085315_00418;Name=threonine synthase;locus_tag=GCA008085315_00418;product=threonine synthase;Dbxref=GO:0004795,GO:0009088;gene=thrC;Parent=GCA008085315_00418_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0498,COG:E,KEGG:K01733,RefSeq:WP_148321054.1,SO:0001217,UniParc:UPI0011DA6E47,UniRef:UniRef100_UPI0011DA6E47,UniRef:UniRef50_P44503,UniRef:UniRef90_A0A142FYR0;ec_number=4.2.3.1 contig_3 Pyrodigal gene 36609 37049 . - . ID=GCA008085315_00419_gene;locus_tag=GCA008085315_00419 contig_3 Pyrodigal CDS 36609 37049 . - 0 ID=GCA008085315_00419;Name=hypothetical protein;locus_tag=GCA008085315_00419;product=hypothetical protein;Parent=GCA008085315_00419_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005538113.1,SO:0001217,UniParc:UPI0001B9F5BD,UniRef:UniRef100_A0AAC8XXY1,UniRef:UniRef50_A0A448F8G5,UniRef:UniRef90_A0AAC8XXY1 contig_3 Pyrodigal gene 37077 38021 . - . ID=GCA008085315_00420_gene;locus_tag=GCA008085315_00420;gene=thrB contig_3 Pyrodigal CDS 37077 38021 . - 0 ID=GCA008085315_00420;Name=homoserine kinase;locus_tag=GCA008085315_00420;product=homoserine kinase;Dbxref=GO:0004413,GO:0005524,GO:0005737,GO:0009088;gene=thrB;Parent=GCA008085315_00420_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0083,COG:E,KEGG:K00872,RefSeq:WP_005538111.1,SO:0001217,UniParc:UPI0001B9F5BC,UniRef:UniRef100_A0A142FYQ8,UniRef:UniRef50_P44504,UniRef:UniRef90_P44504;ec_number=2.7.1.39 contig_3 Pyrodigal gene 38034 40481 . - . ID=GCA008085315_00421_gene;locus_tag=GCA008085315_00421;gene=thrA contig_3 Pyrodigal CDS 38034 40481 . - 0 ID=GCA008085315_00421;Name=bifunctional aspartate kinase/homoserine dehydrogenase I;locus_tag=GCA008085315_00421;product=bifunctional aspartate kinase/homoserine dehydrogenase I;Dbxref=GO:0004072,GO:0004412,GO:0008652,GO:0009067,GO:0050661;gene=thrA;Parent=GCA008085315_00421_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0527,COG:E,KEGG:K12524,RefSeq:WP_005538110.1,SO:0001217,UniParc:UPI0001B9F5BB,UniRef:UniRef100_A0A5D0ENU9,UniRef:UniRef50_P00561,UniRef:UniRef90_A0A5D0ENU9;ec_number=2.7.2.4 contig_3 Pyrodigal gene 40840 42228 . + . ID=GCA008085315_00422_gene;locus_tag=GCA008085315_00422;gene=pncB contig_3 Pyrodigal CDS 40840 42228 . + 0 ID=GCA008085315_00422;Name=nicotinate phosphoribosyltransferase;locus_tag=GCA008085315_00422;product=nicotinate phosphoribosyltransferase;Dbxref=GO:0004514,GO:0009435;gene=pncB;Parent=GCA008085315_00422_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1488,COG:H,RefSeq:WP_148321052.1,SO:0001217,UniParc:UPI0011D6BF75,UniRef:UniRef100_UPI0011D6BF75,UniRef:UniRef50_W9V8G5,UniRef:UniRef90_A0A142FYQ6;ec_number=6.3.4.21 contig_3 Pyrodigal gene 42221 42916 . + . ID=GCA008085315_00423_gene;locus_tag=GCA008085315_00423;gene=yggS contig_3 Pyrodigal CDS 42221 42916 . + 0 ID=GCA008085315_00423;Name=Pyridoxal phosphate homeostasis protein;locus_tag=GCA008085315_00423;product=Pyridoxal phosphate homeostasis protein;gene=yggS;Parent=GCA008085315_00423_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0325,COG:H,KEGG:K06997,RefSeq:WP_005548402.1,SO:0001217,UniParc:UPI0001B9F5B8,UniRef:UniRef100_UPI0001B9F5B8,UniRef:UniRef50_K2JZF9,UniRef:UniRef90_A0A5D0ENU4 contig_3 Pyrodigal gene 42969 43805 . - . ID=GCA008085315_00424_gene;locus_tag=GCA008085315_00424;gene=opuBA contig_3 Pyrodigal CDS 42969 43805 . - 0 ID=GCA008085315_00424;Name=ABC transporter ATP-binding protein;locus_tag=GCA008085315_00424;product=ABC transporter ATP-binding protein;gene=opuBA;Parent=GCA008085315_00424_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1125,COG:E,RefSeq:WP_005548400.1,SO:0001217,UniParc:UPI0001B9F5B7,UniRef:UniRef100_A0A142FYQ4,UniRef:UniRef50_V9H5D6,UniRef:UniRef90_A0A142FYQ4 contig_3 Pyrodigal gene 44120 45631 . - . ID=GCA008085315_00425_gene;locus_tag=GCA008085315_00425;gene=osmF contig_3 Pyrodigal CDS 44120 45631 . - 0 ID=GCA008085315_00425;Name=ABC transporter permease/substrate-binding protein;locus_tag=GCA008085315_00425;product=ABC transporter permease/substrate-binding protein;gene=osmF;Parent=GCA008085315_00425_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1732,COG:M,RefSeq:WP_148321051.1,SO:0001217,UniParc:UPI0011D461F7,UniRef:UniRef100_UPI0011D461F7,UniRef:UniRef50_V9H798,UniRef:UniRef90_A0A5D0ENW6 contig_3 Pyrodigal gene 45766 46770 . - . ID=GCA008085315_00426_gene;locus_tag=GCA008085315_00426;gene=bamC contig_3 Pyrodigal CDS 45766 46770 . - 0 ID=GCA008085315_00426;Name=Outer membrane protein assembly factor BamC;locus_tag=GCA008085315_00426;product=Outer membrane protein assembly factor BamC;gene=bamC;Parent=GCA008085315_00426_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07287,RefSeq:WP_148321050.1,SO:0001217,UniParc:UPI0011D6C067,UniRef:UniRef100_UPI0011D6C067,UniRef:UniRef50_Q9CLZ8,UniRef:UniRef90_A0A5D0ENV7 contig_3 Pyrodigal gene 46883 47776 . - . ID=GCA008085315_00427_gene;locus_tag=GCA008085315_00427;gene=dapA contig_3 Pyrodigal CDS 46883 47776 . - 0 ID=GCA008085315_00427;Name=4-hydroxy-tetrahydrodipicolinate synthase;locus_tag=GCA008085315_00427;product=4-hydroxy-tetrahydrodipicolinate synthase;Dbxref=GO:0008840,GO:0009089;gene=dapA;Parent=GCA008085315_00427_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0329,COG:EM,RefSeq:WP_005538090.1,SO:0001217,UniParc:UPI0001B9F5B4,UniRef:UniRef100_A0A5D0ENT5,UniRef:UniRef50_Q9KQ47,UniRef:UniRef90_A0A5D0ENT5;ec_number=4.3.3.7 contig_3 Pyrodigal gene 47934 48398 . + . ID=GCA008085315_00428_gene;locus_tag=GCA008085315_00428;gene=bcp contig_3 Pyrodigal CDS 47934 48398 . + 0 ID=GCA008085315_00428;Name=thioredoxin-dependent thiol peroxidase;locus_tag=GCA008085315_00428;product=thioredoxin-dependent thiol peroxidase;Dbxref=GO:0016209,GO:0016491;gene=bcp;Parent=GCA008085315_00428_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1225,COG:O,KEGG:K03564,RefSeq:WP_005538088.1,SO:0001217,UniParc:UPI0001B9F5B3,UniRef:UniRef100_A0A142FYQ0,UniRef:UniRef50_A0A1B9JZ94,UniRef:UniRef90_A0A142FYQ0;ec_number=1.11.1.24 contig_3 Pyrodigal gene 48462 50972 . - . ID=GCA008085315_00429_gene;locus_tag=GCA008085315_00429;gene=smc contig_3 Pyrodigal CDS 48462 50972 . - 0 ID=GCA008085315_00429;Name=Autotransporter adhesin;locus_tag=GCA008085315_00429;product=Autotransporter adhesin;gene=smc;Parent=GCA008085315_00429_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1196,COG:D,RefSeq:WP_187370262.1,SO:0001217,UniParc:UPI0016523091,UniRef:UniRef100_UPI0016523091,UniRef:UniRef50_A0A3S4QRF1,UniRef:UniRef90_G4A6I3 contig_3 Pyrodigal gene 51198 53051 . - . ID=GCA008085315_00430_gene;locus_tag=GCA008085315_00430;gene=typA contig_3 Pyrodigal CDS 51198 53051 . - 0 ID=GCA008085315_00430;Name=translational GTPase TypA;locus_tag=GCA008085315_00430;product=translational GTPase TypA;Dbxref=GO:0003924,GO:0005525,GO:0006412,GO:0006950;gene=typA;Parent=GCA008085315_00430_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1217,COG:T,RefSeq:WP_005548389.1,SO:0001217,UniParc:UPI0001B9F5B0,UniRef:UniRef100_UPI0001B9F5B0,UniRef:UniRef50_P0DTT0,UniRef:UniRef90_A0A377I690 contig_3 Pyrodigal gene 53438 54847 . + . ID=GCA008085315_00431_gene;locus_tag=GCA008085315_00431;gene=glnA contig_3 Pyrodigal CDS 53438 54847 . + 0 ID=GCA008085315_00431;Name=type I glutamate--ammonia ligase;locus_tag=GCA008085315_00431;product=type I glutamate--ammonia ligase;Dbxref=GO:0004356,GO:0006542;gene=glnA;Parent=GCA008085315_00431_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01915,RefSeq:WP_005548387.1,SO:0001217,UniParc:UPI00022BFD5D,UniRef:UniRef100_UPI00022BFD5D,UniRef:UniRef50_Q3V5W6,UniRef:UniRef90_UPI00022BFD5D;ec_number=6.3.1.2 contig_3 Pyrodigal gene 54956 55681 . - . ID=GCA008085315_00432_gene;locus_tag=GCA008085315_00432;gene=terC contig_3 Pyrodigal CDS 54956 55681 . - 0 ID=GCA008085315_00432;Name=TerC family integral membrane protein;locus_tag=GCA008085315_00432;product=TerC family integral membrane protein;gene=terC;Parent=GCA008085315_00432_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0861,COG:P,RefSeq:WP_148321049.1,SO:0001217,UniParc:UPI0011D4F930,UniRef:UniRef100_UPI0011D4F930,UniRef:UniRef50_A0A091AT73,UniRef:UniRef90_E6KW97 contig_3 Pyrodigal gene 55746 56414 . - . ID=GCA008085315_00433_gene;locus_tag=GCA008085315_00433;gene=mutH contig_3 Pyrodigal CDS 55746 56414 . - 0 ID=GCA008085315_00433;Name=DNA mismatch repair endonuclease MutH;locus_tag=GCA008085315_00433;product=DNA mismatch repair endonuclease MutH;Dbxref=GO:0004519,GO:0006304;gene=mutH;Parent=GCA008085315_00433_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3066,COG:L,KEGG:K03573,RefSeq:WP_005541016.1,SO:0001217,UniParc:UPI0001B9F5AD,UniRef:UniRef100_A0A142FYP5,UniRef:UniRef50_Q9CLY2,UniRef:UniRef90_A0A142FYP5 contig_3 Pyrodigal gene 56411 56950 . - . ID=GCA008085315_00434_gene;locus_tag=GCA008085315_00434;gene=adaB contig_3 Pyrodigal CDS 56411 56950 . - 0 ID=GCA008085315_00434;Name=Methylated-DNA--protein-cysteine methyltransferase;locus_tag=GCA008085315_00434;product=Methylated-DNA--protein-cysteine methyltransferase;gene=adaB;Parent=GCA008085315_00434_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0350,COG:L,RefSeq:WP_005541018.1,SO:0001217,UniParc:UPI0001B9F5AC,UniRef:UniRef100_A0A142FYP4,UniRef:UniRef50_P44687,UniRef:UniRef90_A0A142FYP4 contig_3 Pyrodigal gene 57027 58457 . - . ID=GCA008085315_00435_gene;locus_tag=GCA008085315_00435;gene=fadL contig_3 Pyrodigal CDS 57027 58457 . - 0 ID=GCA008085315_00435;Name=Outer membrane protein transport protein;locus_tag=GCA008085315_00435;product=Outer membrane protein transport protein;gene=fadL;Parent=GCA008085315_00435_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2067,COG:I,RefSeq:WP_148321048.1,SO:0001217,UniParc:UPI0011DC4B97,UniRef:UniRef100_UPI0011DC4B97,UniRef:UniRef50_P43838,UniRef:UniRef90_A0A142FYP3 contig_3 Pyrodigal gene 58660 58950 . + . ID=GCA008085315_00436_gene;locus_tag=GCA008085315_00436;gene=yfcZ contig_3 Pyrodigal CDS 58660 58950 . + 0 ID=GCA008085315_00436;Name=DUF406 domain-containing protein;locus_tag=GCA008085315_00436;product=DUF406 domain-containing protein;gene=yfcZ;Parent=GCA008085315_00436_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3691,COG:S,RefSeq:WP_005541021.1,SO:0001217,UniParc:UPI0001B9F5AA,UniRef:UniRef100_A0A142FYP2,UniRef:UniRef50_Q2NSG9,UniRef:UniRef90_A0A142FYP2 contig_3 Pyrodigal gene 59012 60289 . - . ID=GCA008085315_00437_gene;locus_tag=GCA008085315_00437;gene=murA contig_3 Pyrodigal CDS 59012 60289 . - 0 ID=GCA008085315_00437;Name=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;locus_tag=GCA008085315_00437;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;Dbxref=GO:0008760,GO:0019277;gene=murA;Parent=GCA008085315_00437_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0766,COG:M,KEGG:K00790,RefSeq:WP_005541024.1,SO:0001217,UniParc:UPI0001CA747E,UniRef:UniRef100_A0A5D0ENW8,UniRef:UniRef50_P33038,UniRef:UniRef90_E6KWA2;ec_number=2.5.1.7 contig_3 Pyrodigal gene 60306 60563 . - . ID=GCA008085315_00438_gene;locus_tag=GCA008085315_00438;gene=ibaG contig_3 Pyrodigal CDS 60306 60563 . - 0 ID=GCA008085315_00438;Name=BolA superfamily transcriptional regulator;locus_tag=GCA008085315_00438;product=BolA superfamily transcriptional regulator;gene=ibaG;Parent=GCA008085315_00438_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5007,COG:T,RefSeq:WP_005541027.1,SO:0001217,UniParc:UPI0001B9F5A8,UniRef:UniRef100_A0A142FYP0,UniRef:UniRef50_P45026,UniRef:UniRef90_E6KWA3 contig_3 Pyrodigal gene 60563 60898 . - . ID=GCA008085315_00439_gene;locus_tag=GCA008085315_00439;gene=mlaB contig_3 Pyrodigal CDS 60563 60898 . - 0 ID=GCA008085315_00439;Name=STAS domain-containing protein;locus_tag=GCA008085315_00439;product=STAS domain-containing protein;gene=mlaB;Parent=GCA008085315_00439_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3113,COG:M,RefSeq:WP_148321047.1,SO:0001217,UniParc:UPI0011D56180,UniRef:UniRef100_UPI0011D56180,UniRef:UniRef50_Q57407,UniRef:UniRef90_A0A5D0DPS5 contig_3 Pyrodigal gene 60902 61543 . - . ID=GCA008085315_00440_gene;locus_tag=GCA008085315_00440;gene=mlaC contig_3 Pyrodigal CDS 60902 61543 . - 0 ID=GCA008085315_00440;Name=phospholipid-binding protein MlaC;locus_tag=GCA008085315_00440;product=phospholipid-binding protein MlaC;gene=mlaC;Parent=GCA008085315_00440_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2854,COG:M,KEGG:K07323,RefSeq:WP_005541032.1,SO:0001217,UniParc:UPI0001B9F5A6,UniRef:UniRef100_A0A142FYN8,UniRef:UniRef50_P45028,UniRef:UniRef90_A0AAP7GW64 contig_3 Pyrodigal gene 61572 62081 . - . ID=GCA008085315_00441_gene;locus_tag=GCA008085315_00441;gene=mlaD contig_3 Pyrodigal CDS 61572 62081 . - 0 ID=GCA008085315_00441;Name=outer membrane lipid asymmetry maintenance protein MlaD;locus_tag=GCA008085315_00441;product=outer membrane lipid asymmetry maintenance protein MlaD;Dbxref=GO:0015914;gene=mlaD;Parent=GCA008085315_00441_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1463,COG:M,RefSeq:WP_005548379.1,SO:0001217,UniParc:UPI0001B9F5A5,UniRef:UniRef100_UPI0001B9F5A5,UniRef:UniRef50_P45029,UniRef:UniRef90_A0A5D0ENX1 contig_3 Pyrodigal gene 62104 62889 . - . ID=GCA008085315_00442_gene;locus_tag=GCA008085315_00442;gene=mlaE contig_3 Pyrodigal CDS 62104 62889 . - 0 ID=GCA008085315_00442;Name=lipid asymmetry maintenance ABC transporter permease subunit MlaE;locus_tag=GCA008085315_00442;product=lipid asymmetry maintenance ABC transporter permease subunit MlaE;Dbxref=GO:0043190;gene=mlaE;Parent=GCA008085315_00442_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0767,COG:M,RefSeq:WP_005548377.1,SO:0001217,UniParc:UPI00022AD0AD,UniRef:UniRef100_UPI00022AD0AD,UniRef:UniRef50_P64606,UniRef:UniRef90_A0A336N4B4 contig_3 Pyrodigal gene 62883 63680 . - . ID=GCA008085315_00443_gene;locus_tag=GCA008085315_00443;gene=mlaF contig_3 Pyrodigal CDS 62883 63680 . - 0 ID=GCA008085315_00443;Name=phospholipid ABC transporter ATP-binding protein MlaF;locus_tag=GCA008085315_00443;product=phospholipid ABC transporter ATP-binding protein MlaF;Dbxref=GO:0005524;gene=mlaF;Parent=GCA008085315_00443_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1127,COG:M,RefSeq:WP_005548375.1,SO:0001217,UniParc:UPI0001B9F5A3,UniRef:UniRef100_UPI0001B9F5A3,UniRef:UniRef50_A0A0K2L697,UniRef:UniRef90_E6KWA8 contig_3 Pyrodigal gene 63964 64539 . + . ID=GCA008085315_00444_gene;locus_tag=GCA008085315_00444;gene=lptC contig_3 Pyrodigal CDS 63964 64539 . + 0 ID=GCA008085315_00444;Name=LPS export ABC transporter periplasmic protein LptC;locus_tag=GCA008085315_00444;product=LPS export ABC transporter periplasmic protein LptC;Dbxref=GO:0005886,GO:0015221,GO:0015920;gene=lptC;Parent=GCA008085315_00444_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3117,COG:M,RefSeq:WP_005548373.1,SO:0001217,UniParc:UPI0001B9F5A2,UniRef:UniRef100_UPI0001B9F5A2,UniRef:UniRef50_P45075,UniRef:UniRef90_A0A142FYN4 contig_3 Pyrodigal gene 64520 65038 . + . ID=GCA008085315_00445_gene;locus_tag=GCA008085315_00445;gene=lptA contig_3 Pyrodigal CDS 64520 65038 . + 0 ID=GCA008085315_00445;Name=lipopolysaccharide transport periplasmic protein LptA;locus_tag=GCA008085315_00445;product=lipopolysaccharide transport periplasmic protein LptA;Dbxref=GO:0001530,GO:0015920,GO:0042597;gene=lptA;Parent=GCA008085315_00445_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1934,COG:M,KEGG:K09774,RefSeq:WP_005541043.1,SO:0001217,UniParc:UPI0001B9F52E,UniRef:UniRef100_A0A142FYN3,UniRef:UniRef50_P45074,UniRef:UniRef90_A0A142FYN3 contig_3 Pyrodigal gene 65044 65769 . + . ID=GCA008085315_00446_gene;locus_tag=GCA008085315_00446;gene=lptB contig_3 Pyrodigal CDS 65044 65769 . + 0 ID=GCA008085315_00446;Name=LPS export ABC transporter ATP-binding protein;locus_tag=GCA008085315_00446;product=LPS export ABC transporter ATP-binding protein;Dbxref=GO:0005524,GO:0043190,GO:0055085;gene=lptB;Parent=GCA008085315_00446_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1137,COG:M,RefSeq:WP_005541044.1,SO:0001217,UniParc:UPI0001B9F52D,UniRef:UniRef100_A0A142FYN2,UniRef:UniRef50_P45073,UniRef:UniRef90_A0A142FYN2;ec_number=7.5.2.5 contig_3 Pyrodigal gene 65773 66294 . + . ID=GCA008085315_00447_gene;locus_tag=GCA008085315_00447;gene=ptsN contig_3 Pyrodigal CDS 65773 66294 . + 0 ID=GCA008085315_00447;Name=PTS IIA-like nitrogen regulatory protein PtsN;locus_tag=GCA008085315_00447;product=PTS IIA-like nitrogen regulatory protein PtsN;Dbxref=GO:0006355,GO:0008982,GO:0009401;gene=ptsN;Parent=GCA008085315_00447_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1762,COG:GT,RefSeq:WP_005548368.1,SO:0001217,UniParc:UPI0001B9F52C,UniRef:UniRef100_UPI0001B9F52C,UniRef:UniRef50_A0A5D0ENX8,UniRef:UniRef90_A0A5D0ENX8 contig_3 Pyrodigal gene 66322 67176 . + . ID=GCA008085315_00448_gene;locus_tag=GCA008085315_00448;gene=rapZ contig_3 Pyrodigal CDS 66322 67176 . + 0 ID=GCA008085315_00448;Name=RNase adapter RapZ;locus_tag=GCA008085315_00448;product=RNase adapter RapZ;Dbxref=GO:0005524;gene=rapZ;Parent=GCA008085315_00448_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1660,COG:T,KEGG:K06958,RefSeq:WP_005548367.1,SO:0001217,UniParc:UPI0001B9F52B,UniRef:UniRef100_UPI0001B9F52B,UniRef:UniRef50_C4K7I7,UniRef:UniRef90_A0A5D0ENV2 contig_3 Pyrodigal gene 67182 68516 . - . ID=GCA008085315_00449_gene;locus_tag=GCA008085315_00449;gene=xseA contig_3 Pyrodigal CDS 67182 68516 . - 0 ID=GCA008085315_00449;Name=exodeoxyribonuclease VII large subunit;locus_tag=GCA008085315_00449;product=exodeoxyribonuclease VII large subunit;Dbxref=GO:0006308,GO:0008855,GO:0009318;gene=xseA;Parent=GCA008085315_00449_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1570,COG:L,KEGG:K03601,RefSeq:WP_148321046.1,SO:0001217,UniParc:UPI0011DA2D54,UniRef:UniRef100_UPI0011DA2D54,UniRef:UniRef50_P04994,UniRef:UniRef90_A0A142FYM9;ec_number=3.1.11.6 contig_3 Pyrodigal gene 68523 69716 . - . ID=GCA008085315_00450_gene;locus_tag=GCA008085315_00450;gene=roxA contig_3 Pyrodigal CDS 68523 69716 . - 0 ID=GCA008085315_00450;Name=Cupin domain-containing protein;locus_tag=GCA008085315_00450;product=Cupin domain-containing protein;gene=roxA;Parent=GCA008085315_00450_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2850,COG:J,KEGG:K18850,RefSeq:WP_005548363.1,SO:0001217,UniParc:UPI0001B9F529,UniRef:UniRef100_UPI0001B9F529,UniRef:UniRef50_P44683,UniRef:UniRef90_A0A142FYM8;ec_number=1.14.11.47 contig_3 Pyrodigal gene 69749 70042 . - . ID=GCA008085315_00451_gene;locus_tag=GCA008085315_00451;gene=pasI contig_3 Pyrodigal CDS 69749 70042 . - 0 ID=GCA008085315_00451;Name=RnfH family protein;locus_tag=GCA008085315_00451;product=RnfH family protein;gene=pasI;Parent=GCA008085315_00451_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2914,COG:V,KEGG:K09801,RefSeq:WP_005548360.1,SO:0001217,UniParc:UPI0001B9F528,UniRef:UniRef100_UPI0001B9F528,UniRef:UniRef50_A0A142FYM7,UniRef:UniRef90_A0A142FYM7 contig_3 Pyrodigal gene 70035 70463 . - . ID=GCA008085315_00452_gene;locus_tag=GCA008085315_00452;gene=pasT contig_3 Pyrodigal CDS 70035 70463 . - 0 ID=GCA008085315_00452;Name=Lipid transporter;locus_tag=GCA008085315_00452;product=Lipid transporter;gene=pasT;Parent=GCA008085315_00452_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2867,COG:J,RefSeq:WP_005548358.1,SO:0001217,UniParc:UPI00022AC913,UniRef:UniRef100_UPI00022AC913,UniRef:UniRef50_Q9CP89,UniRef:UniRef90_A0A5D0EPI6 contig_3 Pyrodigal gene 70536 70952 . + . ID=GCA008085315_00453_gene;locus_tag=GCA008085315_00453;gene=ribN contig_3 Pyrodigal CDS 70536 70952 . + 0 ID=GCA008085315_00453;Name=EamA domain-containing protein;locus_tag=GCA008085315_00453;product=EamA domain-containing protein;gene=ribN;Parent=GCA008085315_00453_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2510,COG:H,RefSeq:WP_005541059.1,SO:0001217,UniParc:UPI0001B9F526,UniRef:UniRef100_A0A142FYM5,UniRef:UniRef50_A0AAP7L2Q5,UniRef:UniRef90_A0AAP7L2Q5 contig_3 Pyrodigal gene 71046 72050 . - . ID=GCA008085315_00454_gene;locus_tag=GCA008085315_00454;gene=gap contig_3 Pyrodigal CDS 71046 72050 . - 0 ID=GCA008085315_00454;Name=type I glyceraldehyde-3-phosphate dehydrogenase;locus_tag=GCA008085315_00454;product=type I glyceraldehyde-3-phosphate dehydrogenase;Dbxref=GO:0004365,GO:0005737,GO:0006006,GO:0006096,GO:0016620,GO:0050661,GO:0051287;gene=gap;Parent=GCA008085315_00454_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0057,COG:G,RefSeq:WP_005548356.1,SO:0001217,UniParc:UPI0001B9F525,UniRef:UniRef100_UPI0001B9F525,UniRef:UniRef50_P10097,UniRef:UniRef90_P44304;ec_number=1.2.1.12 contig_3 Pyrodigal gene 72292 72930 . + . ID=GCA008085315_00455_gene;locus_tag=GCA008085315_00455;gene=gmk contig_3 Pyrodigal CDS 72292 72930 . + 0 ID=GCA008085315_00455;Name=guanylate kinase;locus_tag=GCA008085315_00455;product=guanylate kinase;Dbxref=GO:0004385,GO:0006163;gene=gmk;Parent=GCA008085315_00455_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0194,COG:F,RefSeq:WP_148334014.1,SO:0001217,UniParc:UPI0011DAC304,UniRef:UniRef100_UPI0011DAC304,UniRef:UniRef50_A0A9D2B0Z9,UniRef:UniRef90_A0A142G164;ec_number=2.7.4.8 contig_3 Pyrodigal gene 72988 73254 . + . ID=GCA008085315_00456_gene;locus_tag=GCA008085315_00456;gene=rpoZ contig_3 Pyrodigal CDS 72988 73254 . + 0 ID=GCA008085315_00456;Name=DNA-directed RNA polymerase subunit omega;locus_tag=GCA008085315_00456;product=DNA-directed RNA polymerase subunit omega;Dbxref=GO:0003899,GO:0006351;gene=rpoZ;Parent=GCA008085315_00456_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1758,COG:K,RefSeq:WP_005538631.1,SO:0001217,UniParc:UPI0001B9F522,UniRef:UniRef100_A0A142G165,UniRef:UniRef50_Q9KNM3,UniRef:UniRef90_A0A142G165;ec_number=2.7.7.6 contig_3 Pyrodigal gene 73300 75423 . + . ID=GCA008085315_00457_gene;locus_tag=GCA008085315_00457;gene=spoT contig_3 Pyrodigal CDS 73300 75423 . + 0 ID=GCA008085315_00457;Name=bifunctional GTP diphosphokinase/guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;locus_tag=GCA008085315_00457;product=bifunctional GTP diphosphokinase/guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;Dbxref=GO:0008728,GO:0008893,GO:0015969;gene=spoT;Parent=GCA008085315_00457_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0317,COG:TK,KEGG:K01139,RefSeq:WP_148321045.1,SO:0001217,UniParc:UPI0011DB1541,UniRef:UniRef100_UPI0011DB1541,UniRef:UniRef50_P43811,UniRef:UniRef90_A0A5D0EHT6;ec_number=3.1.7.2 contig_3 Pyrodigal gene 75424 77505 . + . ID=GCA008085315_00458_gene;locus_tag=GCA008085315_00458;gene=recG contig_3 Pyrodigal CDS 75424 77505 . + 0 ID=GCA008085315_00458;Name=ATP-dependent DNA helicase RecG;locus_tag=GCA008085315_00458;product=ATP-dependent DNA helicase RecG;Dbxref=GO:0003676,GO:0003678,GO:0005524,GO:0006281,GO:0006310;gene=recG;Parent=GCA008085315_00458_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1200,COG:L,RefSeq:WP_005548351.1,SO:0001217,UniParc:UPI0001B9F520,UniRef:UniRef100_UPI0001B9F520,UniRef:UniRef50_P24230,UniRef:UniRef90_E6KWC2;ec_number=3.6.4.12 contig_3 Pyrodigal gene 77498 77995 . + . ID=GCA008085315_00459_gene;locus_tag=GCA008085315_00459;gene=ubiC contig_3 Pyrodigal CDS 77498 77995 . + 0 ID=GCA008085315_00459;Name=putative chorismate pyruvate-lyase;locus_tag=GCA008085315_00459;product=putative chorismate pyruvate-lyase;gene=ubiC;Parent=GCA008085315_00459_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3161,COG:H,KEGG:K03181,RefSeq:WP_005548348.1,SO:0001217,UniParc:UPI0001B9F51F,UniRef:UniRef100_UPI0001B9F51F,UniRef:UniRef50_A0A142G168,UniRef:UniRef90_A0A142G168;ec_number=4.1.3.40 contig_3 Pyrodigal gene 78026 78853 . + . ID=GCA008085315_00460_gene;locus_tag=GCA008085315_00460;gene=murI contig_3 Pyrodigal CDS 78026 78853 . + 0 ID=GCA008085315_00460;Name=glutamate racemase;locus_tag=GCA008085315_00460;product=glutamate racemase;Dbxref=GO:0008881,GO:0009252;gene=murI;Parent=GCA008085315_00460_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0796,COG:M,RefSeq:WP_005548345.1,SO:0001217,UniParc:UPI0001B9F51E,UniRef:UniRef100_UPI0001B9F51E,UniRef:UniRef50_P52973,UniRef:UniRef90_A0A142G169;ec_number=5.1.1.3 ##sequence-region contig_4 1 77526 contig_4 Bakta region 1 77526 . + . ID=contig_4;Name=contig_4 contig_4 tRNAscan-SE gene 238 332 . - . ID=GCA008085315_00461_gene;locus_tag=GCA008085315_00461;gene=trnU contig_4 tRNAscan-SE tRNA 238 332 . - . ID=GCA008085315_00461;Name=tRNA-SeC(tca);locus_tag=GCA008085315_00461;product=tRNA-SeC(tca);gene=trnU;anti_codon=tca;amino_acid=SeC;Parent=GCA008085315_00461_gene;inference=profile:tRNAscan:2.0;Note=SO:0005857 contig_4 Pyrodigal gene 407 1879 . - . ID=GCA008085315_00462_gene;locus_tag=GCA008085315_00462;gene=xylB contig_4 Pyrodigal CDS 407 1879 . - 0 ID=GCA008085315_00462;Name=xylulokinase;locus_tag=GCA008085315_00462;product=xylulokinase;Dbxref=GO:0004856,GO:0005997;gene=xylB;Parent=GCA008085315_00462_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1070,COG:G,KEGG:K00854,RefSeq:WP_148321075.1,SO:0001217,UniParc:UPI0011D442B6,UniRef:UniRef100_UPI0011D442B6,UniRef:UniRef50_P44401,UniRef:UniRef90_G4AB27;ec_number=2.7.1.17 contig_4 Pyrodigal gene 1928 3247 . - . ID=GCA008085315_00463_gene;locus_tag=GCA008085315_00463;gene=xylA contig_4 Pyrodigal CDS 1928 3247 . - 0 ID=GCA008085315_00463;Name=xylose isomerase;locus_tag=GCA008085315_00463;product=xylose isomerase;Dbxref=GO:0009045,GO:0042732;gene=xylA;Parent=GCA008085315_00463_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2115,COG:G,KEGG:K01805,RefSeq:WP_148321074.1,SO:0001217,UniParc:UPI0011D3C506,UniRef:UniRef100_UPI0011D3C506,UniRef:UniRef50_P00944,UniRef:UniRef90_A0A5D0ELJ3;ec_number=5.3.1.5 contig_4 Pyrodigal gene 3505 4503 . + . ID=GCA008085315_00464_gene;locus_tag=GCA008085315_00464;gene=xylF contig_4 Pyrodigal CDS 3505 4503 . + 0 ID=GCA008085315_00464;Name=D-xylose ABC transporter substrate-binding protein;locus_tag=GCA008085315_00464;product=D-xylose ABC transporter substrate-binding protein;Dbxref=GO:0015753;gene=xylF;Parent=GCA008085315_00464_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4213,COG:G,RefSeq:WP_005574956.1,SO:0001217,UniParc:UPI00022AE44D,UniRef:UniRef100_UPI00022AE44D,UniRef:UniRef50_P45047,UniRef:UniRef90_A0A5D0EMC2 contig_4 Pyrodigal gene 4563 6074 . + . ID=GCA008085315_00465_gene;locus_tag=GCA008085315_00465;gene=xylG contig_4 Pyrodigal CDS 4563 6074 . + 0 ID=GCA008085315_00465;Name=D-xylose ABC transporter ATP-binding protein;locus_tag=GCA008085315_00465;product=D-xylose ABC transporter ATP-binding protein;Dbxref=GO:0005524,GO:0015614,GO:0015753,GO:0016020;gene=xylG;Parent=GCA008085315_00465_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1129,COG:G,SO:0001217,UniRef:UniRef50_P45046,UniRef:UniRef90_A0A5D0EKE3;ec_number=7.5.2.10 contig_4 Pyrodigal gene 6078 7145 . + . ID=GCA008085315_00466_gene;locus_tag=GCA008085315_00466;gene=xylH contig_4 Pyrodigal CDS 6078 7145 . + 0 ID=GCA008085315_00466;Name=Xylose transport system permease protein XylH;locus_tag=GCA008085315_00466;product=Xylose transport system permease protein XylH;gene=xylH;Parent=GCA008085315_00466_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4214,COG:G,KEGG:K10544,SO:0001217,UniRef:UniRef50_P0AGI4,UniRef:UniRef90_A0A380TLQ7 contig_4 Pyrodigal gene 7155 8351 . + . ID=GCA008085315_00467_gene;locus_tag=GCA008085315_00467;gene=malY contig_4 Pyrodigal CDS 7155 8351 . + 0 ID=GCA008085315_00467;Name=cysteine-S-conjugate beta-lyase;locus_tag=GCA008085315_00467;product=cysteine-S-conjugate beta-lyase;gene=malY;Parent=GCA008085315_00467_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1168,COG:ER,RefSeq:WP_005546250.1,SO:0001217,UniParc:UPI0001B9F77A,UniRef:UniRef100_UPI0001B9F77A,UniRef:UniRef50_A0A1V4AYS4,UniRef:UniRef90_A0A5D0EJB9 contig_4 Pyrodigal gene 8338 8733 . + . ID=GCA008085315_00468_gene;locus_tag=GCA008085315_00468 contig_4 Pyrodigal CDS 8338 8733 . + 0 ID=GCA008085315_00468;Name=Sodium/proton antiporter;locus_tag=GCA008085315_00468;product=Sodium/proton antiporter;Parent=GCA008085315_00468_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A379VRP8 contig_4 Pyrodigal gene 8764 9750 . + . ID=GCA008085315_00469_gene;locus_tag=GCA008085315_00469;gene=nhaC contig_4 Pyrodigal CDS 8764 9750 . + 0 ID=GCA008085315_00469;Name=Na+/H+ antiporter NhaC;locus_tag=GCA008085315_00469;product=Na+/H+ antiporter NhaC;gene=nhaC;Parent=GCA008085315_00469_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_I0RC38 contig_4 Pyrodigal gene 9865 11037 . + . ID=GCA008085315_00470_gene;locus_tag=GCA008085315_00470;gene=araC contig_4 Pyrodigal CDS 9865 11037 . + 0 ID=GCA008085315_00470;Name=Transcriptional regulator;locus_tag=GCA008085315_00470;product=Transcriptional regulator;gene=araC;Parent=GCA008085315_00470_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2207,COG:K,RefSeq:WP_005546256.1,SO:0001217,UniParc:UPI0001B9F776,UniRef:UniRef100_UPI0001B9F776,UniRef:UniRef50_P45043,UniRef:UniRef90_A0A5D0EJK1 contig_4 Pyrodigal gene 11064 12455 . - . ID=GCA008085315_00471_gene;locus_tag=GCA008085315_00471;gene=araJ contig_4 Pyrodigal CDS 11064 12455 . - 0 ID=GCA008085315_00471;Name=MFS transporter;locus_tag=GCA008085315_00471;product=MFS transporter;gene=araJ;Parent=GCA008085315_00471_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2814,COG:G,RefSeq:WP_187370263.1,SO:0001217,UniParc:UPI00165245DF,UniRef:UniRef100_UPI00165245DF,UniRef:UniRef50_P44903,UniRef:UniRef90_A0A5D0EK60 contig_4 Pyrodigal gene 12807 13805 . + . ID=GCA008085315_00472_gene;locus_tag=GCA008085315_00472;gene=manX contig_4 Pyrodigal CDS 12807 13805 . + 0 ID=GCA008085315_00472;Name=PTS mannose transporter subunit IIAB;locus_tag=GCA008085315_00472;product=PTS mannose transporter subunit IIAB;Dbxref=GO:0008982,GO:0009401;gene=manX;Parent=GCA008085315_00472_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3444,COG:G,KEGG:K02794,RefSeq:WP_148321071.1,SO:0001217,UniParc:UPI0011DB3D9F,UniRef:UniRef100_UPI0011DB3D9F,UniRef:UniRef50_P69797,UniRef:UniRef90_A0A5D0EKT7;ec_number=2.7.1.191 contig_4 Pyrodigal gene 13817 14620 . + . ID=GCA008085315_00473_gene;locus_tag=GCA008085315_00473;gene=manY contig_4 Pyrodigal CDS 13817 14620 . + 0 ID=GCA008085315_00473;Name=PTS mannose transporter subunit IIC;locus_tag=GCA008085315_00473;product=PTS mannose transporter subunit IIC;gene=manY;Parent=GCA008085315_00473_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3715,COG:G,RefSeq:WP_005546265.1,SO:0001217,UniParc:UPI0001B9F72D,UniRef:UniRef100_UPI0001B9F72D,UniRef:UniRef50_P69801,UniRef:UniRef90_A0A5D0ELN6 contig_4 Pyrodigal gene 14636 15472 . + . ID=GCA008085315_00474_gene;locus_tag=GCA008085315_00474;gene=manZ contig_4 Pyrodigal CDS 14636 15472 . + 0 ID=GCA008085315_00474;Name=PTS N-acetylgalactosamine transporter subunit IIC;locus_tag=GCA008085315_00474;product=PTS N-acetylgalactosamine transporter subunit IIC;gene=manZ;Parent=GCA008085315_00474_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3716,COG:G,RefSeq:WP_005546267.1,SO:0001217,UniParc:UPI00022AE447,UniRef:UniRef100_UPI00022AE447,UniRef:UniRef50_P26382,UniRef:UniRef90_A0A5D0ELI4 contig_4 Pyrodigal gene 15653 17257 . - . ID=GCA008085315_00475_gene;locus_tag=GCA008085315_00475 contig_4 Pyrodigal CDS 15653 17257 . - 0 ID=GCA008085315_00475;Name=class I SAM-dependent DNA methyltransferase;locus_tag=GCA008085315_00475;product=class I SAM-dependent DNA methyltransferase;Parent=GCA008085315_00475_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03427,RefSeq:WP_005574943.1,SO:0001217,UniParc:UPI00022AE446,UniRef:UniRef100_UPI00022AE446,UniRef:UniRef50_C8NDJ9,UniRef:UniRef90_UPI000E15A9F8;ec_number=2.1.1.72 contig_4 Pyrodigal gene 17358 17552 . - . ID=GCA008085315_00476_gene;locus_tag=GCA008085315_00476 contig_4 Pyrodigal CDS 17358 17552 . - 0 ID=GCA008085315_00476;Name=hypothetical protein;locus_tag=GCA008085315_00476;product=hypothetical protein;Parent=GCA008085315_00476_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005541724.1,SO:0001217,UniParc:UPI0001B9F72A,UniRef:UniRef100_UPI0001B9F72A,UniRef:UniRef50_UPI0001B9F72A,UniRef:UniRef90_UPI0001B9F72A contig_4 Pyrodigal gene 17533 17985 . - . ID=GCA008085315_00477_gene;locus_tag=GCA008085315_00477 contig_4 Pyrodigal CDS 17533 17985 . - 0 ID=GCA008085315_00477;Name=restriction endonuclease subunit S;locus_tag=GCA008085315_00477;product=restriction endonuclease subunit S;Parent=GCA008085315_00477_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_233439068.1,SO:0001217,UniParc:UPI001F37773D,UniRef:UniRef100_UPI001F37773D,UniRef:UniRef50_UPI001F37773D,UniRef:UniRef90_UPI001F37773D contig_4 Pyrodigal gene 18086 18868 . - . ID=GCA008085315_00478_gene;locus_tag=GCA008085315_00478 contig_4 Pyrodigal CDS 18086 18868 . - 0 ID=GCA008085315_00478;Name=type I restriction endonuclease;locus_tag=GCA008085315_00478;product=type I restriction endonuclease;Parent=GCA008085315_00478_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005568554.1,SO:0001217,UniParc:UPI0001B9F727,UniRef:UniRef100_UPI0001B9F727,UniRef:UniRef50_UPI001E28D07F,UniRef:UniRef90_UPI001E28D07F contig_4 Pyrodigal gene 18933 19538 . - . ID=GCA008085315_00479_gene;locus_tag=GCA008085315_00479;gene=uvrB contig_4 Pyrodigal CDS 18933 19538 . - 0 ID=GCA008085315_00479;Name=UvrB domain 3-containing protein;locus_tag=GCA008085315_00479;product=UvrB domain 3-containing protein;gene=uvrB;Parent=GCA008085315_00479_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_233439067.1,SO:0001217,UniParc:UPI001F48F34D,UniRef:UniRef100_UPI001F48F34D,UniRef:UniRef50_UPI001F48F34D,UniRef:UniRef90_UPI001F48F34D contig_4 Pyrodigal gene 19525 21093 . - . ID=GCA008085315_00480_gene;locus_tag=GCA008085315_00480 contig_4 Pyrodigal CDS 19525 21093 . - 0 ID=GCA008085315_00480;Name=type I restriction endonuclease;locus_tag=GCA008085315_00480;product=type I restriction endonuclease;Parent=GCA008085315_00480_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01153,RefSeq:WP_233439066.1,SO:0001217,UniParc:UPI001F3A19DE,UniRef:UniRef100_UPI001F3A19DE,UniRef:UniRef50_A0A370FZ10,UniRef:UniRef90_UPI001F3A19DE;ec_number=3.1.21.3 contig_4 Pyrodigal gene 21399 22445 . + . ID=GCA008085315_00481_gene;locus_tag=GCA008085315_00481;gene=potD contig_4 Pyrodigal CDS 21399 22445 . + 0 ID=GCA008085315_00481;Name=Putrescine-binding periplasmic protein;locus_tag=GCA008085315_00481;product=Putrescine-binding periplasmic protein;gene=potD;Parent=GCA008085315_00481_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0687,COG:E,RefSeq:WP_005546279.1,SO:0001217,UniParc:UPI0001B9F724,UniRef:UniRef100_UPI0001B9F724,UniRef:UniRef50_P44731,UniRef:UniRef90_A0A142G0F9 contig_4 Pyrodigal gene 22506 22934 . - . ID=GCA008085315_00482_gene;locus_tag=GCA008085315_00482;gene=atpC contig_4 Pyrodigal CDS 22506 22934 . - 0 ID=GCA008085315_00482;Name=F0F1 ATP synthase subunit epsilon;locus_tag=GCA008085315_00482;product=F0F1 ATP synthase subunit epsilon;Dbxref=GO:0015986,GO:0046933;gene=atpC;Parent=GCA008085315_00482_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0355,RefSeq:WP_005546281.1,SO:0001217,UniParc:UPI0001B9F723,UniRef:UniRef100_UPI0001B9F723,UniRef:UniRef50_P43718,UniRef:UniRef90_E6L0J8;ec_number=7.1.2.2 contig_4 Pyrodigal gene 22976 24349 . - . ID=GCA008085315_00483_gene;locus_tag=GCA008085315_00483;gene=atpD contig_4 Pyrodigal CDS 22976 24349 . - 0 ID=GCA008085315_00483;Name=F0F1 ATP synthase subunit beta;locus_tag=GCA008085315_00483;product=F0F1 ATP synthase subunit beta;Dbxref=GO:0005524,GO:0005886,GO:0015986,GO:0016887,GO:0045261,GO:0046933,GO:0046961;gene=atpD;Parent=GCA008085315_00483_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0055,RefSeq:WP_005546283.1,SO:0001217,UniParc:UPI0001B9F722,UniRef:UniRef100_UPI0001B9F722,UniRef:UniRef50_Q07232,UniRef:UniRef90_P43715;ec_number=7.1.2.2 contig_4 Pyrodigal gene 24366 25235 . - . ID=GCA008085315_00484_gene;locus_tag=GCA008085315_00484;gene=atpG contig_4 Pyrodigal CDS 24366 25235 . - 0 ID=GCA008085315_00484;Name=F0F1 ATP synthase subunit gamma;locus_tag=GCA008085315_00484;product=F0F1 ATP synthase subunit gamma;Dbxref=GO:0005524,GO:0005886,GO:0015986,GO:0042777,GO:0045261,GO:0046933;gene=atpG;Parent=GCA008085315_00484_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0224,KEGG:K02115,SO:0001217,UniRef:UniRef50_P43716,UniRef:UniRef90_P43716;ec_number=7.1.2.2 contig_4 Pyrodigal gene 25251 26792 . - . ID=GCA008085315_00485_gene;locus_tag=GCA008085315_00485;gene=atpA contig_4 Pyrodigal CDS 25251 26792 . - 0 ID=GCA008085315_00485;Name=F0F1 ATP synthase subunit alpha;locus_tag=GCA008085315_00485;product=F0F1 ATP synthase subunit alpha;Dbxref=GO:0005524,GO:0005886,GO:0015986,GO:0043531,GO:0045261,GO:0046933,GO:0046961;gene=atpA;Parent=GCA008085315_00485_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0056,RefSeq:WP_148321069.1,SO:0001217,UniParc:UPI0011D50D69,UniRef:UniRef100_UPI0011D50D69,UniRef:UniRef50_Q9KNH3,UniRef:UniRef90_P43714;ec_number=7.1.2.2 contig_4 Pyrodigal gene 26805 27353 . - . ID=GCA008085315_00486_gene;locus_tag=GCA008085315_00486;gene=atpH contig_4 Pyrodigal CDS 26805 27353 . - 0 ID=GCA008085315_00486;Name=F0F1 ATP synthase subunit delta;locus_tag=GCA008085315_00486;product=F0F1 ATP synthase subunit delta;Dbxref=GO:0015986,GO:0016020,GO:0046933;gene=atpH;Parent=GCA008085315_00486_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0712,RefSeq:WP_005546289.1,SO:0001217,UniParc:UPI0001B9F71F,UniRef:UniRef100_UPI0001B9F71F,UniRef:UniRef50_Q7CFM5,UniRef:UniRef90_A0A142G0F4;ec_number=7.1.2.2 contig_4 Pyrodigal gene 27367 27837 . - . ID=GCA008085315_00487_gene;locus_tag=GCA008085315_00487;gene=atpF contig_4 Pyrodigal CDS 27367 27837 . - 0 ID=GCA008085315_00487;Name=F0F1 ATP synthase subunit B;locus_tag=GCA008085315_00487;product=F0F1 ATP synthase subunit B;Dbxref=GO:0005886,GO:0015078,GO:0015986,GO:0045263,GO:0046933;gene=atpF;Parent=GCA008085315_00487_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0711,RefSeq:WP_005546293.1,SO:0001217,UniParc:UPI00022BFEFB,UniRef:UniRef100_UPI00022BFEFB,UniRef:UniRef50_A0KQY2,UniRef:UniRef90_A5UGZ3;ec_number=7.1.2.2 contig_4 Pyrodigal gene 27887 28141 . - . ID=GCA008085315_00488_gene;locus_tag=GCA008085315_00488;gene=atpE contig_4 Pyrodigal CDS 27887 28141 . - 0 ID=GCA008085315_00488;Name=F0F1 ATP synthase subunit C;locus_tag=GCA008085315_00488;product=F0F1 ATP synthase subunit C;Dbxref=GO:0005886,GO:0008289,GO:0015078,GO:0015986,GO:0045263,GO:0046933;gene=atpE;Parent=GCA008085315_00488_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0636,RefSeq:WP_005539567.1,SO:0001217,UniParc:UPI0001B9F71D,UniRef:UniRef100_A0A1V3ILU3,UniRef:UniRef50_P43721,UniRef:UniRef90_P43721;ec_number=7.1.2.2 contig_4 Pyrodigal gene 28195 28983 . - . ID=GCA008085315_00489_gene;locus_tag=GCA008085315_00489;gene=atpB contig_4 Pyrodigal CDS 28195 28983 . - 0 ID=GCA008085315_00489;Name=F0F1 ATP synthase subunit A;locus_tag=GCA008085315_00489;product=F0F1 ATP synthase subunit A;Dbxref=GO:0005886,GO:0015078,GO:0015986,GO:0042777,GO:0045263,GO:0046933;gene=atpB;Parent=GCA008085315_00489_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0356,KEGG:K02108,RefSeq:WP_148321068.1,SO:0001217,UniParc:UPI0011D45093,UniRef:UniRef100_UPI0011D45093,UniRef:UniRef50_P43719,UniRef:UniRef90_P43719;ec_number=7.1.2.2 contig_4 Pyrodigal gene 29008 29385 . - . ID=GCA008085315_00490_gene;locus_tag=GCA008085315_00490;gene=atpI contig_4 Pyrodigal CDS 29008 29385 . - 0 ID=GCA008085315_00490;Name=ATP synthase F0F1 subunit I;locus_tag=GCA008085315_00490;product=ATP synthase F0F1 subunit I;gene=atpI;Parent=GCA008085315_00490_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG3312,RefSeq:WP_005568543.1,SO:0001217,UniParc:UPI0001B9F71B,UniRef:UniRef100_UPI0001B9F71B,UniRef:UniRef50_O86225,UniRef:UniRef90_A0A5D0EKY3 contig_4 Pyrodigal gene 29497 30114 . - . ID=GCA008085315_00491_gene;locus_tag=GCA008085315_00491;gene=rsmG contig_4 Pyrodigal CDS 29497 30114 . - 0 ID=GCA008085315_00491;Name=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;locus_tag=GCA008085315_00491;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;Dbxref=GO:0008168,GO:0031167,GO:0046118;gene=rsmG;Parent=GCA008085315_00491_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0357,COG:J,KEGG:K03501,RefSeq:WP_005546299.1,SO:0001217,UniParc:UPI00022AC34E,UniRef:UniRef100_UPI00022AC34E,UniRef:UniRef50_Q07VT4,UniRef:UniRef90_A0A142G0E9;ec_number=2.1.1.170 contig_4 Pyrodigal gene 30173 30535 . - . ID=GCA008085315_00492_gene;locus_tag=GCA008085315_00492;gene=hxlR contig_4 Pyrodigal CDS 30173 30535 . - 0 ID=GCA008085315_00492;Name=Transcriptional regulator;locus_tag=GCA008085315_00492;product=Transcriptional regulator;gene=hxlR;Parent=GCA008085315_00492_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1733,COG:K,RefSeq:WP_005546302.1,SO:0001217,UniParc:UPI0001B9F719,UniRef:UniRef100_UPI0001B9F719,UniRef:UniRef50_Q65WB0,UniRef:UniRef90_A0A142G0E8 contig_4 Pyrodigal gene 30786 31544 . + . ID=GCA008085315_00493_gene;locus_tag=GCA008085315_00493;gene=ybjT contig_4 Pyrodigal CDS 30786 31544 . + 0 ID=GCA008085315_00493;Name=NmrA family protein;locus_tag=GCA008085315_00493;product=NmrA family protein;gene=ybjT;Parent=GCA008085315_00493_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0702,COG:R,SO:0001217,UniRef:UniRef50_A0A098C526,UniRef:UniRef90_G4A9I7 contig_4 Pyrodigal gene 31816 33705 . - . ID=GCA008085315_00494_gene;locus_tag=GCA008085315_00494;gene=mnmG contig_4 Pyrodigal CDS 31816 33705 . - 0 ID=GCA008085315_00494;Name=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;locus_tag=GCA008085315_00494;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;Dbxref=GO:0002098,GO:0005829,GO:0008033,GO:0030488,GO:0050660;gene=mnmG;Parent=GCA008085315_00494_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0445,COG:J,KEGG:K03495,RefSeq:WP_148321067.1,SO:0001217,UniParc:UPI0011D7F9C2,UniRef:UniRef100_UPI0011D7F9C2,UniRef:UniRef50_P0A6U3,UniRef:UniRef90_P44763 contig_4 BLAST+ rep_origin 31817 33219 . ? . ID=FFLMJBKAJI_2073;Name=origin of replication;Note=origin of replication contig_4 BLAST+ rep_origin 33706 34147 . ? . ID=FFLMJBKAJI_2074;Name=origin of replication;Note=origin of replication contig_4 Pyrodigal gene 34148 34591 . - . ID=GCA008085315_00495_gene;locus_tag=GCA008085315_00495;gene=mioC contig_4 Pyrodigal CDS 34148 34591 . - 0 ID=GCA008085315_00495;Name=FMN-binding protein MioC;locus_tag=GCA008085315_00495;product=FMN-binding protein MioC;Dbxref=GO:0010181;gene=mioC;Parent=GCA008085315_00495_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0716,RefSeq:WP_005546308.1,SO:0001217,UniParc:UPI0001B9F716,UniRef:UniRef100_UPI0001B9F716,UniRef:UniRef50_Q9L6A2,UniRef:UniRef90_A0A5D0EKW3 contig_4 Pyrodigal gene 34648 34866 . - . ID=GCA008085315_00496_gene;locus_tag=GCA008085315_00496;gene=zapB contig_4 Pyrodigal CDS 34648 34866 . - 0 ID=GCA008085315_00496;Name=Cell division protein ZapB;locus_tag=GCA008085315_00496;product=Cell division protein ZapB;gene=zapB;Parent=GCA008085315_00496_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3074,COG:D,RefSeq:WP_005539576.1,SO:0001217,UniParc:UPI0001B9F715,UniRef:UniRef100_A0A142G0E4,UniRef:UniRef50_A0A142G0E4,UniRef:UniRef90_A0A142G0E4 contig_4 Pyrodigal gene 35062 36075 . + . ID=GCA008085315_00497_gene;locus_tag=GCA008085315_00497;gene=glpX contig_4 Pyrodigal CDS 35062 36075 . + 0 ID=GCA008085315_00497;Name=class II fructose-bisphosphatase;locus_tag=GCA008085315_00497;product=class II fructose-bisphosphatase;Dbxref=GO:0006071,GO:0006094,GO:0042132;gene=glpX;Parent=GCA008085315_00497_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1494,COG:G,KEGG:K02446,RefSeq:WP_005546310.1,SO:0001217,UniParc:UPI00022AD366,UniRef:UniRef100_UPI00022AD366,UniRef:UniRef50_P0A9C9,UniRef:UniRef90_A0A142G0E3;ec_number=3.1.3.11 contig_4 Pyrodigal gene 36113 36517 . - . ID=GCA008085315_00498_gene;locus_tag=GCA008085315_00498 contig_4 Pyrodigal CDS 36113 36517 . - 0 ID=GCA008085315_00498;Name=Lipoprotein;locus_tag=GCA008085315_00498;product=Lipoprotein;Parent=GCA008085315_00498_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005566167.1,SO:0001217,UniParc:UPI0001B9F713,UniRef:UniRef100_UPI0001B9F713,UniRef:UniRef50_A0A5D0EK90,UniRef:UniRef90_A0A5D0EK90 contig_4 Infernal gene 36594 36694 . + . ID=GCA008085315_00499_gene;locus_tag=GCA008085315_00499;gene=AaHKsRNA22 contig_4 Infernal ncRNA 36594 36694 1.6e-13 + . ID=GCA008085315_00499;Name=Aggregatibacter sRNA 22;locus_tag=GCA008085315_00499;product=Aggregatibacter sRNA 22;Dbxref=RFAM:RF02902;Parent=GCA008085315_00499_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02902 contig_4 Pyrodigal gene 36717 37514 . - . ID=GCA008085315_00500_gene;locus_tag=GCA008085315_00500;gene=cysE contig_4 Pyrodigal CDS 36717 37514 . - 0 ID=GCA008085315_00500;Name=serine O-acetyltransferase;locus_tag=GCA008085315_00500;product=serine O-acetyltransferase;Dbxref=GO:0006535,GO:0009001;gene=cysE;Parent=GCA008085315_00500_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1045,COG:E,RefSeq:WP_005546312.1,SO:0001217,UniParc:UPI0001B9F711,UniRef:UniRef100_UPI0001B9F711,UniRef:UniRef50_P0A9D4,UniRef:UniRef90_E6L0L3;ec_number=2.3.1.30 contig_4 Pyrodigal gene 37517 38530 . - . ID=GCA008085315_00501_gene;locus_tag=GCA008085315_00501;gene=gpsA contig_4 Pyrodigal CDS 37517 38530 . - 0 ID=GCA008085315_00501;Name=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;locus_tag=GCA008085315_00501;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;Dbxref=GO:0006072,GO:0047952;gene=gpsA;Parent=GCA008085315_00501_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0240,RefSeq:WP_005574927.1,SO:0001217,UniParc:UPI00022AD364,UniRef:UniRef100_UPI00022AD364,UniRef:UniRef50_P0A6S7,UniRef:UniRef90_A0A5D0ELD0;ec_number=1.1.1.94 contig_4 Pyrodigal gene 38609 39121 . - . ID=GCA008085315_00502_gene;locus_tag=GCA008085315_00502;gene=secB contig_4 Pyrodigal CDS 38609 39121 . - 0 ID=GCA008085315_00502;Name=protein-export chaperone SecB;locus_tag=GCA008085315_00502;product=protein-export chaperone SecB;Dbxref=GO:0015031,GO:0051082,GO:0051262;gene=secB;Parent=GCA008085315_00502_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1952,COG:U,KEGG:K03071,RefSeq:WP_005539581.1,SO:0001217,UniParc:UPI0001B9F70F,UniRef:UniRef100_A0A5D0ELW4,UniRef:UniRef50_P44853,UniRef:UniRef90_A0A5D0ELW4 contig_4 Pyrodigal gene 39137 39577 . - . ID=GCA008085315_00503_gene;locus_tag=GCA008085315_00503;gene=pspE contig_4 Pyrodigal CDS 39137 39577 . - 0 ID=GCA008085315_00503;Name=Rhodanese-like domain-containing protein;locus_tag=GCA008085315_00503;product=Rhodanese-like domain-containing protein;gene=pspE;Parent=GCA008085315_00503_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0607,COG:P,RefSeq:WP_033002956.1,SO:0001217,UniParc:UPI00051918FF,UniRef:UniRef100_UPI00051918FF,UniRef:UniRef50_P44854,UniRef:UniRef90_A0A142G0D8 contig_4 Pyrodigal gene 39904 41226 . + . ID=GCA008085315_00504_gene;locus_tag=GCA008085315_00504;gene=dcuB contig_4 Pyrodigal CDS 39904 41226 . + 0 ID=GCA008085315_00504;Name=Anaerobic C4-dicarboxylate transporter DcuB;locus_tag=GCA008085315_00504;product=Anaerobic C4-dicarboxylate transporter DcuB;Dbxref=GO:0005886,GO:0015297,GO:0015556;gene=dcuB;Parent=GCA008085315_00504_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2704,COG:G,RefSeq:WP_005589153.1,SO:0001217,UniParc:UPI0002ABF4AB,UniRef:UniRef100_UPI0002ABF4AB,UniRef:UniRef50_P44855,UniRef:UniRef90_P44855 contig_4 Pyrodigal gene 41395 43143 . + . ID=GCA008085315_00505_gene;locus_tag=GCA008085315_00505;gene=cydD contig_4 Pyrodigal CDS 41395 43143 . + 0 ID=GCA008085315_00505;Name=ABC superfamily ATP binding cassette transporter%2C ABC protein;locus_tag=GCA008085315_00505;product=ABC superfamily ATP binding cassette transporter%2C ABC protein;gene=cydD;Parent=GCA008085315_00505_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CO,COG:COG4988,RefSeq:WP_053330100.1,SO:0001217,UniParc:UPI0006A6AC17,UniRef:UniRef100_UPI0006A6AC17,UniRef:UniRef50_P71355,UniRef:UniRef90_E6L0L8 contig_4 Pyrodigal gene 43160 44794 . + . ID=GCA008085315_00506_gene;locus_tag=GCA008085315_00506;gene=cydC contig_4 Pyrodigal CDS 43160 44794 . + 0 ID=GCA008085315_00506;Name=thiol reductant ABC exporter subunit CydC;locus_tag=GCA008085315_00506;product=thiol reductant ABC exporter subunit CydC;Dbxref=GO:0005524,GO:0016020,GO:0033228,GO:0033230,GO:0045454,GO:0050456,GO:0055051;gene=cydC;Parent=GCA008085315_00506_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1132,COG:V,SO:0001217,UniRef:UniRef50_Q57538,UniRef:UniRef90_A0A5D0EKV3 contig_4 Pyrodigal gene 44906 45526 . - . ID=GCA008085315_00507_gene;locus_tag=GCA008085315_00507;gene=fabR contig_4 Pyrodigal CDS 44906 45526 . - 0 ID=GCA008085315_00507;Name=HTH-type transcriptional repressor FabR;locus_tag=GCA008085315_00507;product=HTH-type transcriptional repressor FabR;Dbxref=GO:0003677;gene=fabR;Parent=GCA008085315_00507_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1309,COG:K,RefSeq:WP_005539586.1,SO:0001217,UniParc:UPI0001B9F70A,UniRef:UniRef100_A0A142G0D4,UniRef:UniRef50_P44757,UniRef:UniRef90_A0A142G0D4 contig_4 Pyrodigal gene 45538 46437 . - . ID=GCA008085315_00508_gene;locus_tag=GCA008085315_00508;gene=oxyR contig_4 Pyrodigal CDS 45538 46437 . - 0 ID=GCA008085315_00508;Name=DNA-binding transcriptional regulator OxyR;locus_tag=GCA008085315_00508;product=DNA-binding transcriptional regulator OxyR;Dbxref=GO:0003700,GO:0006355;gene=oxyR;Parent=GCA008085315_00508_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0583,COG:K,RefSeq:WP_005539591.1,SO:0001217,UniParc:UPI000021FCD3,UniRef:UniRef100_Q75TM5,UniRef:UniRef50_P0ACQ4,UniRef:UniRef90_Q75TM5 contig_4 Pyrodigal gene 46596 47324 . + . ID=GCA008085315_00509_gene;locus_tag=GCA008085315_00509;gene=pGdx contig_4 Pyrodigal CDS 46596 47324 . + 0 ID=GCA008085315_00509;Name=Hybrid peroxiredoxin hyPrx5;locus_tag=GCA008085315_00509;product=Hybrid peroxiredoxin hyPrx5;Dbxref=GO:0005737,GO:0008379,GO:0034599,GO:0042744,GO:0045454;gene=pGdx;Parent=GCA008085315_00509_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0695,COG:O,KEGG:K24136,RefSeq:WP_005539592.1,SO:0001217,UniParc:UPI0001B9F709,UniRef:UniRef100_Q75TM4,UniRef:UniRef50_P44758,UniRef:UniRef90_P44758;ec_number=1.11.1.27 contig_4 Pyrodigal gene 47385 47606 . - . ID=GCA008085315_00510_gene;locus_tag=GCA008085315_00510;gene=slyX contig_4 Pyrodigal CDS 47385 47606 . - 0 ID=GCA008085315_00510;Name=Protein SlyX-like protein;locus_tag=GCA008085315_00510;product=Protein SlyX-like protein;gene=slyX;Parent=GCA008085315_00510_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2900,COG:S,RefSeq:WP_005546325.1,SO:0001217,UniParc:UPI00022BFF68,UniRef:UniRef100_UPI00022BFF68,UniRef:UniRef50_P44759,UniRef:UniRef90_Q75TM3 contig_4 Pyrodigal gene 47695 48420 . + . ID=GCA008085315_00511_gene;locus_tag=GCA008085315_00511;gene=fkpA contig_4 Pyrodigal CDS 47695 48420 . + 0 ID=GCA008085315_00511;Name=Peptidyl-prolyl cis-trans isomerase;locus_tag=GCA008085315_00511;product=Peptidyl-prolyl cis-trans isomerase;gene=fkpA;Parent=GCA008085315_00511_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0545,COG:O,RefSeq:WP_005546327.1,SO:0001217,UniParc:UPI0001B9F707,UniRef:UniRef100_UPI0001B9F707,UniRef:UniRef50_P44760,UniRef:UniRef90_A0A142G0D0 contig_4 Pyrodigal gene 48500 49168 . + . ID=GCA008085315_00512_gene;locus_tag=GCA008085315_00512;gene=yheO contig_4 Pyrodigal CDS 48500 49168 . + 0 ID=GCA008085315_00512;Name=Transcriptional regulator;locus_tag=GCA008085315_00512;product=Transcriptional regulator;gene=yheO;Parent=GCA008085315_00512_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2964,COG:K,RefSeq:WP_005546328.1,SO:0001217,UniParc:UPI0001B9F706,UniRef:UniRef100_UPI0001B9F706,UniRef:UniRef50_P64624,UniRef:UniRef90_A0A8B2U4W8 contig_4 Pyrodigal gene 49172 49549 . + . ID=GCA008085315_00513_gene;locus_tag=GCA008085315_00513;gene=tusD contig_4 Pyrodigal CDS 49172 49549 . + 0 ID=GCA008085315_00513;Name=sulfurtransferase complex subunit TusD;locus_tag=GCA008085315_00513;product=sulfurtransferase complex subunit TusD;Dbxref=GO:0008033,GO:0016783;gene=tusD;Parent=GCA008085315_00513_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1553,COG:J,KEGG:K07235,RefSeq:WP_005546330.1,SO:0001217,UniParc:UPI0001B9F6A8,UniRef:UniRef100_UPI0001B9F6A8,UniRef:UniRef50_P44762,UniRef:UniRef90_A0A142G0C8;ec_number=2.8.1.- contig_4 Pyrodigal gene 49546 49908 . + . ID=GCA008085315_00514_gene;locus_tag=GCA008085315_00514;gene=tusC contig_4 Pyrodigal CDS 49546 49908 . + 0 ID=GCA008085315_00514;Name=sulfurtransferase complex subunit TusC;locus_tag=GCA008085315_00514;product=sulfurtransferase complex subunit TusC;gene=tusC;Parent=GCA008085315_00514_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2923,COG:J,KEGG:K07236,RefSeq:WP_005546332.1,SO:0001217,UniParc:UPI0001B9F6A7,UniRef:UniRef100_UPI0001B9F6A7,UniRef:UniRef50_Q57194,UniRef:UniRef90_A0A5D0EME6 contig_4 Pyrodigal gene 49911 50198 . + . ID=GCA008085315_00515_gene;locus_tag=GCA008085315_00515;gene=tusB contig_4 Pyrodigal CDS 49911 50198 . + 0 ID=GCA008085315_00515;Name=Sulfurtransferase complex subunit TusB;locus_tag=GCA008085315_00515;product=Sulfurtransferase complex subunit TusB;gene=tusB;Parent=GCA008085315_00515_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2168,COG:J,KEGG:K07237,RefSeq:WP_005546333.1,SO:0001217,UniParc:UPI0001B9F6A6,UniRef:UniRef100_A0A142G0C6,UniRef:UniRef50_I2NGL2,UniRef:UniRef90_A0A142G0C6 contig_4 Pyrodigal gene 50203 50970 . - . ID=GCA008085315_00516_gene;locus_tag=GCA008085315_00516;gene=glnQ contig_4 Pyrodigal CDS 50203 50970 . - 0 ID=GCA008085315_00516;Name=Amino acid ABC superfamily ATP binding cassette transporter%2C ABC protein YckI;locus_tag=GCA008085315_00516;product=Amino acid ABC superfamily ATP binding cassette transporter%2C ABC protein YckI;gene=glnQ;Parent=GCA008085315_00516_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1126,COG:E,RefSeq:WP_005546337.1,SO:0001217,UniParc:UPI0001B9F6A5,UniRef:UniRef100_UPI0001B9F6A5,UniRef:UniRef50_E6L0A0,UniRef:UniRef90_E6L0A0 contig_4 Pyrodigal gene 50980 51702 . - . ID=GCA008085315_00517_gene;locus_tag=GCA008085315_00517;gene=hisM contig_4 Pyrodigal CDS 50980 51702 . - 0 ID=GCA008085315_00517;Name=Amino acid ABC transporter permease;locus_tag=GCA008085315_00517;product=Amino acid ABC transporter permease;gene=hisM;Parent=GCA008085315_00517_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0765,COG:E,RefSeq:WP_005546340.1,SO:0001217,UniParc:UPI0001B9F6A4,UniRef:UniRef100_UPI0001B9F6A4,UniRef:UniRef50_P45023,UniRef:UniRef90_A0A142G0C4 contig_4 Pyrodigal gene 51686 52465 . - . ID=GCA008085315_00518_gene;locus_tag=GCA008085315_00518;gene=hisJ contig_4 Pyrodigal CDS 51686 52465 . - 0 ID=GCA008085315_00518;Name=Putative cystine-binding periplasmic protein;locus_tag=GCA008085315_00518;product=Putative cystine-binding periplasmic protein;gene=hisJ;Parent=GCA008085315_00518_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0834,COG:ET,RefSeq:WP_005546341.1,SO:0001217,UniParc:UPI0001B9F6A3,UniRef:UniRef100_UPI0001B9F6A3,UniRef:UniRef50_P45024,UniRef:UniRef90_U1R3U0 contig_4 Pyrodigal gene 52591 53886 . - . ID=GCA008085315_00519_gene;locus_tag=GCA008085315_00519;gene=dadA contig_4 Pyrodigal CDS 52591 53886 . - 0 ID=GCA008085315_00519;Name=Gamma-glutamylputrescine oxidoreductase;locus_tag=GCA008085315_00519;product=Gamma-glutamylputrescine oxidoreductase;gene=dadA;Parent=GCA008085315_00519_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0665,COG:E,KEGG:K09471,RefSeq:WP_005546343.1,SO:0001217,UniParc:UPI0001B9F6A2,UniRef:UniRef100_UPI0001B9F6A2,UniRef:UniRef50_P44732,UniRef:UniRef90_A0A336N9H3;ec_number=1.4.3.- contig_4 Pyrodigal gene 54011 55375 . - . ID=GCA008085315_00520_gene;locus_tag=GCA008085315_00520 contig_4 Pyrodigal CDS 54011 55375 . - 0 ID=GCA008085315_00520;Name=Patatin;locus_tag=GCA008085315_00520;product=Patatin;Parent=GCA008085315_00520_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005546344.1,SO:0001217,UniParc:UPI0001B9F6A1,UniRef:UniRef100_UPI0001B9F6A1,UniRef:UniRef50_U1R405,UniRef:UniRef90_G4A9G1 contig_4 Pyrodigal gene 55637 55942 . + . ID=GCA008085315_00521_gene;locus_tag=GCA008085315_00521 contig_4 Pyrodigal CDS 55637 55942 . + 0 ID=GCA008085315_00521;Name=hypothetical protein;locus_tag=GCA008085315_00521;product=hypothetical protein;Parent=GCA008085315_00521_gene;inference=ab initio prediction:Pyrodigal:3.5 contig_4 Pyrodigal gene 56082 56657 . + . ID=GCA008085315_00522_gene;locus_tag=GCA008085315_00522;gene=yjbM contig_4 Pyrodigal CDS 56082 56657 . + 0 ID=GCA008085315_00522;Name=RelA/SpoT domain-containing protein;locus_tag=GCA008085315_00522;product=RelA/SpoT domain-containing protein;gene=yjbM;Parent=GCA008085315_00522_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2357,COG:FT,RefSeq:WP_231097664.1,SO:0001217,UniParc:UPI000798405D,UniRef:UniRef100_UPI000798405D,UniRef:UniRef50_UPI001F11D91A,UniRef:UniRef90_UPI001F11D91A contig_4 Pyrodigal gene 56729 57205 . + . ID=GCA008085315_00523_gene;locus_tag=GCA008085315_00523 contig_4 Pyrodigal CDS 56729 57205 . + 0 ID=GCA008085315_00523;Name=RelA/SpoT domain-containing protein;locus_tag=GCA008085315_00523;product=RelA/SpoT domain-containing protein;Parent=GCA008085315_00523_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005546347.1,SO:0001217,UniParc:UPI00022BFF6A,UniRef:UniRef100_UPI001E32D2EA,UniRef:UniRef50_A0A2X4RCK1,UniRef:UniRef90_UPI0004375AC1 contig_4 Pyrodigal gene 57317 58231 . - . ID=GCA008085315_00524_gene;locus_tag=GCA008085315_00524;gene=murQ contig_4 Pyrodigal CDS 57317 58231 . - 0 ID=GCA008085315_00524;Name=N-acetylmuramic acid 6-phosphate etherase;locus_tag=GCA008085315_00524;product=N-acetylmuramic acid 6-phosphate etherase;Dbxref=GO:0009254,GO:0016835,GO:0046348;gene=murQ;Parent=GCA008085315_00524_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2103,COG:M,RefSeq:WP_005589152.1,SO:0001217,UniParc:UPI0002ABEC80,UniRef:UniRef100_UPI0002ABEC80,UniRef:UniRef50_Q9KU39,UniRef:UniRef90_A0A142G0G0;ec_number=4.2.1.126 contig_4 Pyrodigal gene 58228 59358 . - . ID=GCA008085315_00525_gene;locus_tag=GCA008085315_00525;gene=anmK contig_4 Pyrodigal CDS 58228 59358 . - 0 ID=GCA008085315_00525;Name=anhydro-N-acetylmuramic acid kinase;locus_tag=GCA008085315_00525;product=anhydro-N-acetylmuramic acid kinase;Dbxref=GO:0005524,GO:0006040,GO:0009254,GO:0016773;gene=anmK;Parent=GCA008085315_00525_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2377,COG:M,KEGG:K09001,RefSeq:WP_148334016.1,SO:0001217,UniParc:UPI0011DC50E5,UniRef:UniRef100_UPI0011DC50E5,UniRef:UniRef50_Q7MNL7,UniRef:UniRef90_A0A142G0G1;ec_number=2.7.1.170 contig_4 Pyrodigal gene 59444 60814 . + . ID=GCA008085315_00526_gene;locus_tag=GCA008085315_00526;gene=glmU contig_4 Pyrodigal CDS 59444 60814 . + 0 ID=GCA008085315_00526;Name=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;locus_tag=GCA008085315_00526;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;Dbxref=GO:0000287,GO:0000902,GO:0003977,GO:0006048,GO:0009252,GO:0019134;gene=glmU;Parent=GCA008085315_00526_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1207,COG:M,KEGG:K04042,RefSeq:WP_005546352.1,SO:0001217,UniParc:UPI0001B9F69C,UniRef:UniRef100_UPI0001B9F69C,UniRef:UniRef50_A7MMY0,UniRef:UniRef90_A0A5D0EK43;ec_number=2.7.7.23 contig_4 Pyrodigal gene 60967 62058 . - . ID=GCA008085315_00527_gene;locus_tag=GCA008085315_00527;gene=elyC contig_4 Pyrodigal CDS 60967 62058 . - 0 ID=GCA008085315_00527;Name=Transporter;locus_tag=GCA008085315_00527;product=Transporter;gene=elyC;Parent=GCA008085315_00527_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1434,COG:M,RefSeq:WP_005546353.1,SO:0001217,UniParc:UPI0001B9F69B,UniRef:UniRef100_UPI0001B9F69B,UniRef:UniRef50_A0A085G780,UniRef:UniRef90_A0A5D0EKX9 contig_4 Pyrodigal gene 62196 62945 . - . ID=GCA008085315_00528_gene;locus_tag=GCA008085315_00528;gene=deoR contig_4 Pyrodigal CDS 62196 62945 . - 0 ID=GCA008085315_00528;Name=DNA-binding transcriptional repressor DeoR;locus_tag=GCA008085315_00528;product=DNA-binding transcriptional repressor DeoR;Dbxref=GO:0003700,GO:0006355;gene=deoR;Parent=GCA008085315_00528_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1349,COG:KG,KEGG:K11534,RefSeq:WP_005546355.1,SO:0001217,UniParc:UPI0001B9F69A,UniRef:UniRef100_UPI0001B9F69A,UniRef:UniRef50_Q9CL96,UniRef:UniRef90_A0A142G0G4 contig_4 Pyrodigal gene 62973 63644 . - . ID=GCA008085315_00529_gene;locus_tag=GCA008085315_00529;gene=deoC contig_4 Pyrodigal CDS 62973 63644 . - 0 ID=GCA008085315_00529;Name=deoxyribose-phosphate aldolase;locus_tag=GCA008085315_00529;product=deoxyribose-phosphate aldolase;Dbxref=GO:0004139,GO:0005737,GO:0009264;gene=deoC;Parent=GCA008085315_00529_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0274,COG:F,KEGG:K01619,RefSeq:WP_148334017.1,SO:0001217,UniParc:UPI0011DB7A16,UniRef:UniRef100_UPI0011DB7A16,UniRef:UniRef50_Q8ZGH4,UniRef:UniRef90_A0A142G0G5;ec_number=4.1.2.4 contig_4 Pyrodigal gene 64351 64716 . - . ID=GCA008085315_00530_gene;locus_tag=GCA008085315_00530 contig_4 Pyrodigal CDS 64351 64716 . - 0 ID=GCA008085315_00530;Name=hypothetical protein;locus_tag=GCA008085315_00530;product=hypothetical protein;Parent=GCA008085315_00530_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=PFAM:PF22022.2,PFAM:PF14659.12 contig_4 Aragorn gene 65578 65943 . - . ID=GCA008085315_00531_gene;locus_tag=GCA008085315_00531;gene=ssrA contig_4 Aragorn tmRNA 65578 65943 . - . ID=GCA008085315_00531;Name=transfer-messenger RNA%2C SsrA;locus_tag=GCA008085315_00531;gene=ssrA;product=transfer-messenger RNA%2C SsrA;tag_peptide=complement(65669..65704);Parent=GCA008085315_00531_gene;inference=profile:aragorn:1.2;Note=SO:0000584 contig_4 Pyrodigal gene 66186 66416 . - . ID=GCA008085315_00532_gene;locus_tag=GCA008085315_00532 contig_4 Pyrodigal CDS 66186 66416 . - 0 ID=GCA008085315_00532;Name=Lipoprotein;locus_tag=GCA008085315_00532;product=Lipoprotein;Parent=GCA008085315_00532_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148321065.1,SO:0001217,UniParc:UPI0011D57CF7,UniRef:UniRef100_UPI0011D57CF7,UniRef:UniRef50_A0A377IWC9,UniRef:UniRef90_G4A600 contig_4 Pyrodigal gene 66413 69148 . - . ID=GCA008085315_00533_gene;locus_tag=GCA008085315_00533;gene=ydbH contig_4 Pyrodigal CDS 66413 69148 . - 0 ID=GCA008085315_00533;Name=YdbH family protein;locus_tag=GCA008085315_00533;product=YdbH family protein;gene=ydbH;Parent=GCA008085315_00533_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148334018.1,SO:0001217,UniParc:UPI0011D94FFE,UniRef:UniRef100_UPI0011D94FFE,UniRef:UniRef50_E6L0J6,UniRef:UniRef90_A0A5D0EI21 contig_4 Pyrodigal gene 69254 69871 . - . ID=GCA008085315_00534_gene;locus_tag=GCA008085315_00534;gene=marC contig_4 Pyrodigal CDS 69254 69871 . - 0 ID=GCA008085315_00534;Name=UPF0056 membrane protein;locus_tag=GCA008085315_00534;product=UPF0056 membrane protein;gene=marC;Parent=GCA008085315_00534_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2095,COG:E,KEGG:K05595,RefSeq:WP_005568493.1,SO:0001217,UniParc:UPI0001B9F693,UniRef:UniRef100_UPI0001B9F693,UniRef:UniRef50_Q65WB5,UniRef:UniRef90_A0A336NAQ3 contig_4 Pyrodigal gene 69952 71877 . + . ID=GCA008085315_00535_gene;locus_tag=GCA008085315_00535 contig_4 Pyrodigal CDS 69952 71877 . + 0 ID=GCA008085315_00535;Name=ABC transporter ATP-binding protein;locus_tag=GCA008085315_00535;product=ABC transporter ATP-binding protein;Dbxref=GO:0005524;Parent=GCA008085315_00535_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005589143.1,SO:0001217,UniParc:UPI0001B9F692,UniRef:UniRef100_UPI0001B9F692,UniRef:UniRef50_A0A0H2VBH0,UniRef:UniRef90_E6L0G5 contig_4 Pyrodigal gene 72025 73083 . + . ID=GCA008085315_00536_gene;locus_tag=GCA008085315_00536;gene=recA contig_4 Pyrodigal CDS 72025 73083 . + 0 ID=GCA008085315_00536;Name=recombinase RecA;locus_tag=GCA008085315_00536;product=recombinase RecA;Dbxref=GO:0003677,GO:0003684,GO:0003697,GO:0005524,GO:0005829,GO:0006281,GO:0006310,GO:0008094,GO:0009432,GO:0016887,GO:0140664;gene=recA;Parent=GCA008085315_00536_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0468,COG:L,KEGG:K03553,RefSeq:WP_005544399.1,SO:0001217,UniParc:UPI0001B9F691,UniRef:UniRef100_A0A5D0EHN3,UniRef:UniRef50_Q07809,UniRef:UniRef90_Q9JRP9 contig_4 Pyrodigal gene 73165 73623 . + . ID=GCA008085315_00537_gene;locus_tag=GCA008085315_00537;gene=recX contig_4 Pyrodigal CDS 73165 73623 . + 0 ID=GCA008085315_00537;Name=recombination regulator RecX;locus_tag=GCA008085315_00537;product=recombination regulator RecX;gene=recX;Parent=GCA008085315_00537_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2137,COG:O,RefSeq:WP_005548507.1,SO:0001217,UniParc:UPI0001B9F690,UniRef:UniRef100_UPI0001B9F690,UniRef:UniRef50_P43706,UniRef:UniRef90_A0A142G0V9 contig_4 Pyrodigal gene 73700 74089 . + . ID=GCA008085315_00538_gene;locus_tag=GCA008085315_00538;gene=ridA contig_4 Pyrodigal CDS 73700 74089 . + 0 ID=GCA008085315_00538;Name=RutC family protein HI_0719;locus_tag=GCA008085315_00538;product=RutC family protein HI_0719;Dbxref=GO:0005829,GO:0019239;gene=ridA;Parent=GCA008085315_00538_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0251,COG:V,RefSeq:WP_148321063.1,SO:0001217,UniParc:UPI0011D7E825,UniRef:UniRef100_UPI0011D7E825,UniRef:UniRef50_Q7CP78,UniRef:UniRef90_P44839 contig_4 Pyrodigal gene 74161 76158 . - . ID=GCA008085315_00539_gene;locus_tag=GCA008085315_00539;gene=tkt contig_4 Pyrodigal CDS 74161 76158 . - 0 ID=GCA008085315_00539;Name=transketolase;locus_tag=GCA008085315_00539;product=transketolase;Dbxref=GO:0004802;gene=tkt;Parent=GCA008085315_00539_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0021,COG:G,KEGG:K00615,RefSeq:WP_148321062.1,SO:0001217,UniParc:UPI0011DA736B,UniRef:UniRef100_UPI0011DA736B,UniRef:UniRef50_A0A220VBW8,UniRef:UniRef90_A0A142G0W1;ec_number=2.2.1.1 contig_4 Pyrodigal gene 76291 77244 . - . ID=GCA008085315_00540_gene;locus_tag=GCA008085315_00540;gene=tal contig_4 Pyrodigal CDS 76291 77244 . - 0 ID=GCA008085315_00540;Name=transaldolase;locus_tag=GCA008085315_00540;product=transaldolase;Dbxref=GO:0004801,GO:0005737,GO:0006098;gene=tal;Parent=GCA008085315_00540_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0176,COG:G,KEGG:K00616,RefSeq:WP_148321061.1,SO:0001217,UniParc:UPI0011DA8BF7,UniRef:UniRef100_UPI0011DA8BF7,UniRef:UniRef50_P0A870,UniRef:UniRef90_E6L093;ec_number=2.2.1.2 ##sequence-region contig_5 1 38652 contig_5 Bakta region 1 38652 . + . ID=contig_5;Name=contig_5 contig_5 Pyrodigal gene 65 2167 . - . ID=GCA008085315_00541_gene;locus_tag=GCA008085315_00541;gene=fusA contig_5 Pyrodigal CDS 65 2167 . - 0 ID=GCA008085315_00541;Name=elongation factor G;locus_tag=GCA008085315_00541;product=elongation factor G;Dbxref=GO:0003746,GO:0003924,GO:0005525,GO:0005737,GO:0006414,GO:0032790,GO:0097216;gene=fusA;Parent=GCA008085315_00541_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0480,COG:J,KEGG:K02355,RefSeq:WP_050846195.1,SO:0001217,UniParc:UPI00067FE788,UniRef:UniRef100_UPI00067FE788,UniRef:UniRef50_P43925,UniRef:UniRef90_P43925 contig_5 Pyrodigal gene 2282 2752 . - . ID=GCA008085315_00542_gene;locus_tag=GCA008085315_00542;gene=rpsG contig_5 Pyrodigal CDS 2282 2752 . - 0 ID=GCA008085315_00542;Name=30S ribosomal protein S7;locus_tag=GCA008085315_00542;product=30S ribosomal protein S7;Dbxref=GO:0000049,GO:0003735,GO:0006412,GO:0015935,GO:0019843;gene=rpsG;Parent=GCA008085315_00542_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0049,COG:J,KEGG:K02992,RefSeq:WP_005555497.1,SO:0001217,UniParc:UPI0001B9F5F8,UniRef:UniRef100_E6KZ74,UniRef:UniRef50_P0A2B3,UniRef:UniRef90_P44376 contig_5 Pyrodigal gene 2905 3279 . - . ID=GCA008085315_00543_gene;locus_tag=GCA008085315_00543;gene=rpsL contig_5 Pyrodigal CDS 2905 3279 . - 0 ID=GCA008085315_00543;Name=30S ribosomal protein S12;locus_tag=GCA008085315_00543;product=30S ribosomal protein S12;Dbxref=GO:0000049,GO:0003735,GO:0005840,GO:0006412,GO:0015935,GO:0019843,GO:0046677;gene=rpsL;Parent=GCA008085315_00543_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0048,COG:J,RefSeq:WP_005543325.1,SO:0001217,UniParc:UPI00001685B5,UniRef:UniRef100_P63196,UniRef:UniRef50_P0A7S3,UniRef:UniRef90_P63196 contig_5 Pyrodigal gene 3507 3818 . - . ID=GCA008085315_00544_gene;locus_tag=GCA008085315_00544 contig_5 Pyrodigal CDS 3507 3818 . - 0 ID=GCA008085315_00544;Name=Ketol-acid reductoisomerase (NADP(+));locus_tag=GCA008085315_00544;product=Ketol-acid reductoisomerase (NADP(+));Parent=GCA008085315_00544_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A2X1J625,UniRef:UniRef90_A0A5D0EIX0 contig_5 Pyrodigal gene 4447 4632 . + . ID=GCA008085315_00545_gene;locus_tag=GCA008085315_00545;gene=lysR contig_5 Pyrodigal CDS 4447 4632 . + 0 ID=GCA008085315_00545;Name=LysR family transcriptional regulator;locus_tag=GCA008085315_00545;product=LysR family transcriptional regulator;gene=lysR;Parent=GCA008085315_00545_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005575611.1,SO:0001217,UniParc:UPI0001B9F5FC,UniRef:UniRef100_UPI0001B9F5FC,UniRef:UniRef50_A0A3S4VBU4,UniRef:UniRef90_A0A5D0ELD5 contig_5 Pyrodigal gene 4665 5546 . + . ID=GCA008085315_00546_gene;locus_tag=GCA008085315_00546;gene=rarD contig_5 Pyrodigal CDS 4665 5546 . + 0 ID=GCA008085315_00546;Name=EamA family transporter RarD;locus_tag=GCA008085315_00546;product=EamA family transporter RarD;Dbxref=GO:0005215,GO:0005886,GO:0006810;gene=rarD;Parent=GCA008085315_00546_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2962,COG:R,KEGG:K05786,RefSeq:WP_005548667.1,SO:0001217,UniParc:UPI0001B9F5FD,UniRef:UniRef100_UPI0001B9F5FD,UniRef:UniRef50_Q57389,UniRef:UniRef90_A0A142FZQ7 contig_5 Pyrodigal gene 5541 6341 . - . ID=GCA008085315_00547_gene;locus_tag=GCA008085315_00547;gene=aroE contig_5 Pyrodigal CDS 5541 6341 . - 0 ID=GCA008085315_00547;Name=shikimate dehydrogenase;locus_tag=GCA008085315_00547;product=shikimate dehydrogenase;Dbxref=GO:0004764,GO:0019632;gene=aroE;Parent=GCA008085315_00547_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0169,COG:E,RefSeq:WP_148321090.1,SO:0001217,UniParc:UPI0011D90099,UniRef:UniRef100_UPI0016529B4B,UniRef:UniRef50_P43876,UniRef:UniRef90_A0A142FZQ6;ec_number=1.1.1.25 contig_5 Pyrodigal gene 6345 6896 . - . ID=GCA008085315_00548_gene;locus_tag=GCA008085315_00548;gene=tsaC contig_5 Pyrodigal CDS 6345 6896 . - 0 ID=GCA008085315_00548;Name=Threonylcarbamoyl-AMP synthase;locus_tag=GCA008085315_00548;product=Threonylcarbamoyl-AMP synthase;gene=tsaC;Parent=GCA008085315_00548_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0009,COG:J,RefSeq:WP_005548663.1,SO:0001217,UniParc:UPI0001B9F5FF,UniRef:UniRef100_UPI0001B9F5FF,UniRef:UniRef50_A6VL69,UniRef:UniRef90_A0A142FZQ5 contig_5 Pyrodigal gene 6901 7449 . - . ID=GCA008085315_00549_gene;locus_tag=GCA008085315_00549;gene=yrdD contig_5 Pyrodigal CDS 6901 7449 . - 0 ID=GCA008085315_00549;Name=DNA topoisomerase type IA zn finger domain-containing protein;locus_tag=GCA008085315_00549;product=DNA topoisomerase type IA zn finger domain-containing protein;gene=yrdD;Parent=GCA008085315_00549_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0551,COG:L,RefSeq:WP_148321091.1,SO:0001217,UniParc:UPI0011D47EC4,UniRef:UniRef100_UPI0011D47EC4,UniRef:UniRef50_P46494,UniRef:UniRef90_A0A5D0EL38 contig_5 Pyrodigal gene 7593 9206 . + . ID=GCA008085315_00550_gene;locus_tag=GCA008085315_00550;gene=rmuC contig_5 Pyrodigal CDS 7593 9206 . + 0 ID=GCA008085315_00550;Name=DNA recombination protein rmuC;locus_tag=GCA008085315_00550;product=DNA recombination protein rmuC;gene=rmuC;Parent=GCA008085315_00550_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1322,COG:L,KEGG:K09760,RefSeq:WP_148321092.1,SO:0001217,UniParc:UPI0011D2FEE2,UniRef:UniRef100_UPI0011D2FEE2,UniRef:UniRef50_P44733,UniRef:UniRef90_A0A448F8G8 contig_5 Pyrodigal gene 9331 9879 . + . ID=GCA008085315_00551_gene;locus_tag=GCA008085315_00551;gene=yqhA contig_5 Pyrodigal CDS 9331 9879 . + 0 ID=GCA008085315_00551;Name=UPF0114 protein ACT75_04770;locus_tag=GCA008085315_00551;product=UPF0114 protein ACT75_04770;gene=yqhA;Parent=GCA008085315_00551_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2862,COG:S,RefSeq:WP_005575609.1,SO:0001217,UniParc:UPI00022ACFC7,UniRef:UniRef100_UPI00022ACFC7,UniRef:UniRef50_P57929,UniRef:UniRef90_A0A142G3A5 contig_5 Pyrodigal gene 9891 10217 . + . ID=GCA008085315_00552_gene;locus_tag=GCA008085315_00552;gene=glpE contig_5 Pyrodigal CDS 9891 10217 . + 0 ID=GCA008085315_00552;Name=thiosulfate sulfurtransferase GlpE;locus_tag=GCA008085315_00552;product=thiosulfate sulfurtransferase GlpE;Dbxref=GO:0004792;gene=glpE;Parent=GCA008085315_00552_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0607,COG:P,RefSeq:WP_005548655.1,SO:0001217,UniParc:UPI0001B9F603,UniRef:UniRef100_UPI0001B9F603,UniRef:UniRef50_Q65QH0,UniRef:UniRef90_A0A142FZQ2;ec_number=2.8.1.1 contig_5 Pyrodigal gene 10229 10543 . - . ID=GCA008085315_00553_gene;locus_tag=GCA008085315_00553 contig_5 Pyrodigal CDS 10229 10543 . - 0 ID=GCA008085315_00553;Name=Aspartate-semialdehyde dehydrogenase;locus_tag=GCA008085315_00553;product=Aspartate-semialdehyde dehydrogenase;Parent=GCA008085315_00553_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_012820825.1,SO:0001217,UniParc:UPI0001B9F604,UniRef:UniRef100_UPI0001B9F604,UniRef:UniRef50_Q9CL11,UniRef:UniRef90_A0A5D0EIJ9 contig_5 Pyrodigal gene 10586 11461 . + . ID=GCA008085315_00554_gene;locus_tag=GCA008085315_00554;gene=glpG contig_5 Pyrodigal CDS 10586 11461 . + 0 ID=GCA008085315_00554;Name=GlpG protein;locus_tag=GCA008085315_00554;product=GlpG protein;gene=glpG;Parent=GCA008085315_00554_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0705,COG:O,KEGG:K02441,RefSeq:WP_005548648.1,SO:0001217,UniParc:UPI0001B9F605,UniRef:UniRef100_UPI0001B9F605,UniRef:UniRef50_E6KZK0,UniRef:UniRef90_A0A142FZQ0;ec_number=3.4.21.105 contig_5 Pyrodigal gene 11523 12278 . + . ID=GCA008085315_00555_gene;locus_tag=GCA008085315_00555;gene=glpR contig_5 Pyrodigal CDS 11523 12278 . + 0 ID=GCA008085315_00555;Name=DeoR/GlpR family transcriptional regulator;locus_tag=GCA008085315_00555;product=DeoR/GlpR family transcriptional regulator;gene=glpR;Parent=GCA008085315_00555_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1349,COG:KG,KEGG:K02444,RefSeq:WP_005543199.1,SO:0001217,UniParc:UPI0001B9F606,UniRef:UniRef100_A0A5D0KM09,UniRef:UniRef50_P44784,UniRef:UniRef90_E6KZJ9 contig_5 Pyrodigal gene 12645 14213 . + . ID=GCA008085315_00556_gene;locus_tag=GCA008085315_00556 contig_5 Pyrodigal CDS 12645 14213 . + 0 ID=GCA008085315_00556;Name=Plug domain-containing protein;locus_tag=GCA008085315_00556;product=Plug domain-containing protein;Parent=GCA008085315_00556_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_UPI001F4EF5ED contig_5 Pyrodigal gene 14337 15347 . + . ID=GCA008085315_00557_gene;locus_tag=GCA008085315_00557 contig_5 Pyrodigal CDS 14337 15347 . + 0 ID=GCA008085315_00557;Name=hypothetical protein;locus_tag=GCA008085315_00557;product=hypothetical protein;Parent=GCA008085315_00557_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=PFAM:PF00593.30 contig_5 Pyrodigal gene 15937 17721 . - . ID=GCA008085315_00558_gene;locus_tag=GCA008085315_00558;gene=yddA contig_5 Pyrodigal CDS 15937 17721 . - 0 ID=GCA008085315_00558;Name=ABC transporter ATP-binding protein;locus_tag=GCA008085315_00558;product=ABC transporter ATP-binding protein;gene=yddA;Parent=GCA008085315_00558_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4178,COG:R,RefSeq:WP_148331213.1,SO:0001217,UniParc:UPI0011D75547,UniRef:UniRef100_UPI0011D75547,UniRef:UniRef50_Q57335,UniRef:UniRef90_G4A5P8 contig_5 Pyrodigal gene 17878 19536 . + . ID=GCA008085315_00559_gene;locus_tag=GCA008085315_00559;gene=ybjL contig_5 Pyrodigal CDS 17878 19536 . + 0 ID=GCA008085315_00559;Name=putative transporter;locus_tag=GCA008085315_00559;product=putative transporter;Dbxref=GO:0006813,GO:0008324;gene=ybjL;Parent=GCA008085315_00559_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2985,COG:R,KEGG:K07085,RefSeq:WP_148321093.1,SO:0001217,UniParc:UPI0011D421DF,UniRef:UniRef100_UPI0011D421DF,UniRef:UniRef50_P60872,UniRef:UniRef90_A0A142FZP6 contig_5 Pyrodigal gene 19693 20406 . + . ID=GCA008085315_00560_gene;locus_tag=GCA008085315_00560;gene=pyrH contig_5 Pyrodigal CDS 19693 20406 . + 0 ID=GCA008085315_00560;Name=UMP kinase;locus_tag=GCA008085315_00560;product=UMP kinase;Dbxref=GO:0005524,GO:0005737,GO:0005829,GO:0006221,GO:0006225,GO:0015949,GO:0033862,GO:0044210;gene=pyrH;Parent=GCA008085315_00560_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0528,COG:F,KEGG:K09903,RefSeq:WP_005548639.1,SO:0001217,UniParc:UPI0001B9F60C,UniRef:UniRef100_UPI0001B9F60C,UniRef:UniRef50_P0A7E9,UniRef:UniRef90_P43890;ec_number=2.7.4.22 contig_5 Pyrodigal gene 20631 21188 . + . ID=GCA008085315_00561_gene;locus_tag=GCA008085315_00561;gene=frr contig_5 Pyrodigal CDS 20631 21188 . + 0 ID=GCA008085315_00561;Name=ribosome recycling factor;locus_tag=GCA008085315_00561;product=ribosome recycling factor;Dbxref=GO:0006412,GO:0008135;gene=frr;Parent=GCA008085315_00561_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148321094.1,SO:0001217,UniParc:UPI0011D334C8,UniRef:UniRef100_UPI0011D334C8,UniRef:UniRef50_O82853,UniRef:UniRef90_UPI0011D334C8 contig_5 Pyrodigal gene 21295 22500 . + . ID=GCA008085315_00562_gene;locus_tag=GCA008085315_00562;gene=ispC contig_5 Pyrodigal CDS 21295 22500 . + 0 ID=GCA008085315_00562;Name=1-deoxy-D-xylulose-5-phosphate reductoisomerase;locus_tag=GCA008085315_00562;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;Dbxref=GO:0005515,GO:0008299,GO:0030604,GO:0046872,GO:0070402;gene=ispC;Parent=GCA008085315_00562_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0743,COG:I,KEGG:K00099,SO:0001217,UniRef:UniRef50_B8F4X2,UniRef:UniRef90_A0A5D0EM93;ec_number=1.1.1.267 contig_5 Pyrodigal gene 22522 23241 . + . ID=GCA008085315_00563_gene;locus_tag=GCA008085315_00563;gene=uppS contig_5 Pyrodigal CDS 22522 23241 . + 0 ID=GCA008085315_00563;Name=polyprenyl diphosphate synthase;locus_tag=GCA008085315_00563;product=polyprenyl diphosphate synthase;Dbxref=GO:0005737,GO:0009252;gene=uppS;Parent=GCA008085315_00563_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0020,COG:I,RefSeq:WP_005548633.1,SO:0001217,UniParc:UPI0001B9F610,UniRef:UniRef100_UPI0001B9F610,UniRef:UniRef50_P44938,UniRef:UniRef90_E6KVT4;ec_number=2.5.1.- contig_5 Pyrodigal gene 23256 24125 . + . ID=GCA008085315_00564_gene;locus_tag=GCA008085315_00564;gene=cdsA contig_5 Pyrodigal CDS 23256 24125 . + 0 ID=GCA008085315_00564;Name=Phosphatidate cytidylyltransferase;locus_tag=GCA008085315_00564;product=Phosphatidate cytidylyltransferase;gene=cdsA;Parent=GCA008085315_00564_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0575,COG:I,KEGG:K00981,RefSeq:WP_005548631.1,SO:0001217,UniParc:UPI0001B9F611,UniRef:UniRef100_UPI0001B9F611,UniRef:UniRef50_P44937,UniRef:UniRef90_A0A142FZP1;ec_number=2.7.7.41 contig_5 Pyrodigal gene 24134 25468 . + . ID=GCA008085315_00565_gene;locus_tag=GCA008085315_00565;gene=rseP contig_5 Pyrodigal CDS 24134 25468 . + 0 ID=GCA008085315_00565;Name=sigma E protease regulator RseP;locus_tag=GCA008085315_00565;product=sigma E protease regulator RseP;Dbxref=GO:0004222,GO:0005515,GO:0006508,GO:0016020;gene=rseP;Parent=GCA008085315_00565_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0750,COG:OK,RefSeq:WP_005575594.1,SO:0001217,UniParc:UPI0001B9F612,UniRef:UniRef100_UPI0001B9F612,UniRef:UniRef50_Q8ZRP1,UniRef:UniRef90_A0A5D0EIJ3;ec_number=3.4.24.- contig_5 Pyrodigal gene 25487 27898 . + . ID=GCA008085315_00566_gene;locus_tag=GCA008085315_00566;gene=bamA contig_5 Pyrodigal CDS 25487 27898 . + 0 ID=GCA008085315_00566;Name=outer membrane protein assembly factor BamA;locus_tag=GCA008085315_00566;product=outer membrane protein assembly factor BamA;Dbxref=GO:0009279,GO:0071709;gene=bamA;Parent=GCA008085315_00566_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4775,COG:M,SO:0001217,UniRef:UniRef50_P44935,UniRef:UniRef90_A0A5D0EJN3 contig_5 Pyrodigal gene 28003 28578 . + . ID=GCA008085315_00567_gene;locus_tag=GCA008085315_00567;gene=hlpA contig_5 Pyrodigal CDS 28003 28578 . + 0 ID=GCA008085315_00567;Name=Omp1-like protein;locus_tag=GCA008085315_00567;product=Omp1-like protein;gene=hlpA;Parent=GCA008085315_00567_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2825,COG:MO,RefSeq:WP_005548625.1,SO:0001217,UniParc:UPI0001B9F681,UniRef:UniRef100_UPI0001B9F681,UniRef:UniRef50_Q51922,UniRef:UniRef90_Q8VL03 contig_5 Pyrodigal gene 28578 29600 . + . ID=GCA008085315_00568_gene;locus_tag=GCA008085315_00568;gene=lpxD contig_5 Pyrodigal CDS 28578 29600 . + 0 ID=GCA008085315_00568;Name=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;locus_tag=GCA008085315_00568;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;Dbxref=GO:0009245,GO:0016410;gene=lpxD;Parent=GCA008085315_00568_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1044,COG:M,RefSeq:WP_005548623.1,SO:0001217,UniParc:UPI0001B9F682,UniRef:UniRef100_UPI0001B9F682,UniRef:UniRef50_P21645,UniRef:UniRef90_E6KVT9;ec_number=2.3.1.191 contig_5 Pyrodigal gene 29695 30147 . + . ID=GCA008085315_00569_gene;locus_tag=GCA008085315_00569;gene=fabZ contig_5 Pyrodigal CDS 29695 30147 . + 0 ID=GCA008085315_00569;Name=3-hydroxyacyl-ACP dehydratase FabZ;locus_tag=GCA008085315_00569;product=3-hydroxyacyl-ACP dehydratase FabZ;gene=fabZ;Parent=GCA008085315_00569_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0764,COG:I,KEGG:K02372,RefSeq:WP_005553711.1,SO:0001217,UniParc:UPI00022ACE11,UniRef:UniRef100_A0A5D0EJD2,UniRef:UniRef50_P45012,UniRef:UniRef90_A0A5D0EJD2;ec_number=4.2.1.59 contig_5 Pyrodigal gene 30168 30956 . + . ID=GCA008085315_00570_gene;locus_tag=GCA008085315_00570;gene=lpxA contig_5 Pyrodigal CDS 30168 30956 . + 0 ID=GCA008085315_00570;Name=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;locus_tag=GCA008085315_00570;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;Dbxref=GO:0008610,GO:0008780;gene=lpxA;Parent=GCA008085315_00570_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1043,COG:M,RefSeq:WP_005548620.1,SO:0001217,UniParc:UPI0001B9F684,UniRef:UniRef100_UPI0001B9F684,UniRef:UniRef50_Q8D2H3,UniRef:UniRef90_A0A142FZN6;ec_number=2.3.1.129 contig_5 Pyrodigal gene 31041 32225 . + . ID=GCA008085315_00571_gene;locus_tag=GCA008085315_00571;gene=lpxB contig_5 Pyrodigal CDS 31041 32225 . + 0 ID=GCA008085315_00571;Name=lipid-A-disaccharide synthase;locus_tag=GCA008085315_00571;product=lipid-A-disaccharide synthase;Dbxref=GO:0008915,GO:0009245;gene=lpxB;Parent=GCA008085315_00571_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0763,COG:M,KEGG:K00748,RefSeq:WP_005548618.1,SO:0001217,UniParc:UPI0001B9F685,UniRef:UniRef100_UPI0001B9F685,UniRef:UniRef50_P10441,UniRef:UniRef90_A0A5D0ELB4;ec_number=2.4.1.182 contig_5 Pyrodigal gene 32218 32817 . + . ID=GCA008085315_00572_gene;locus_tag=GCA008085315_00572;gene=rnhB contig_5 Pyrodigal CDS 32218 32817 . + 0 ID=GCA008085315_00572;Name=ribonuclease HII;locus_tag=GCA008085315_00572;product=ribonuclease HII;Dbxref=GO:0003723,GO:0004523;gene=rnhB;Parent=GCA008085315_00572_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0164,COG:L,KEGG:K03470,RefSeq:WP_005548616.1,SO:0001217,UniParc:UPI0001B9F686,UniRef:UniRef100_UPI0001B9F686,UniRef:UniRef50_Q4QLM7,UniRef:UniRef90_A0A142FZN4;ec_number=3.1.26.4 contig_5 Pyrodigal gene 32857 34725 . + . ID=GCA008085315_00573_gene;locus_tag=GCA008085315_00573;gene=citT contig_5 Pyrodigal CDS 32857 34725 . + 0 ID=GCA008085315_00573;Name=Na(+)/dicarboxylate symporter;locus_tag=GCA008085315_00573;product=Na(+)/dicarboxylate symporter;gene=citT;Parent=GCA008085315_00573_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0471,COG:G,RefSeq:WP_005575589.1,SO:0001217,UniParc:UPI00022ACFBC,UniRef:UniRef100_UPI00022ACFBC,UniRef:UniRef50_Q65VH9,UniRef:UniRef90_A0A336N7B9 contig_5 Pyrodigal gene 34736 35344 . + . ID=GCA008085315_00574_gene;locus_tag=GCA008085315_00574;gene=pgsA contig_5 Pyrodigal CDS 34736 35344 . + 0 ID=GCA008085315_00574;Name=CDP-alcohol phosphatidyltransferase;locus_tag=GCA008085315_00574;product=CDP-alcohol phosphatidyltransferase;gene=pgsA;Parent=GCA008085315_00574_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0558,COG:I,RefSeq:WP_005548612.1,SO:0001217,UniParc:UPI0001B9F689,UniRef:UniRef100_UPI0001B9F689,UniRef:UniRef50_A0A1Q4GR33,UniRef:UniRef90_A0A5D0EJJ7 contig_5 Pyrodigal gene 35355 35987 . + . ID=GCA008085315_00575_gene;locus_tag=GCA008085315_00575 contig_5 Pyrodigal CDS 35355 35987 . + 0 ID=GCA008085315_00575;Name=lysophospholipid acyltransferase family protein;locus_tag=GCA008085315_00575;product=lysophospholipid acyltransferase family protein;Parent=GCA008085315_00575_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148334019.1,SO:0001217,UniParc:UPI0011D3FE8F,UniRef:UniRef100_UPI0011D3FE8F,UniRef:UniRef50_V7IAH9,UniRef:UniRef90_UPI0011D3FE8F contig_5 Pyrodigal gene 35987 36916 . + . ID=GCA008085315_00576_gene;locus_tag=GCA008085315_00576 contig_5 Pyrodigal CDS 35987 36916 . + 0 ID=GCA008085315_00576;Name=Phosphatidate cytidylyltransferase;locus_tag=GCA008085315_00576;product=Phosphatidate cytidylyltransferase;Parent=GCA008085315_00576_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K00981,RefSeq:WP_012820828.1,SO:0001217,UniParc:UPI0001B9F68B,UniRef:UniRef100_UPI0001B9F68B,UniRef:UniRef50_E6KVU7,UniRef:UniRef90_E6KVU7;ec_number=2.7.7.41 contig_5 Pyrodigal gene 37006 37587 . + . ID=GCA008085315_00577_gene;locus_tag=GCA008085315_00577;gene=mog contig_5 Pyrodigal CDS 37006 37587 . + 0 ID=GCA008085315_00577;Name=molybdopterin adenylyltransferase;locus_tag=GCA008085315_00577;product=molybdopterin adenylyltransferase;Dbxref=GO:0006777;gene=mog;Parent=GCA008085315_00577_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0521,COG:H,RefSeq:WP_005540434.1,SO:0001217,UniParc:UPI0001B9F68C,UniRef:UniRef100_A0A142FZM9,UniRef:UniRef50_P0AF03,UniRef:UniRef90_A0A142FZM9;ec_number=2.7.7.75 ##sequence-region contig_6 1 31330 contig_6 Bakta region 1 31330 . + . ID=contig_6;Name=contig_6 contig_6 Pyrodigal gene 90 347 . - . ID=GCA008085315_00578_gene;locus_tag=GCA008085315_00578;gene=rpsQ contig_6 Pyrodigal CDS 90 347 . - 0 ID=GCA008085315_00578;Name=30S ribosomal protein S17;locus_tag=GCA008085315_00578;product=30S ribosomal protein S17;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:0022627;gene=rpsQ;Parent=GCA008085315_00578_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0186,COG:J,RefSeq:WP_005539352.1,SO:0001217,UniParc:UPI000016F736,UniRef:UniRef100_P55829,UniRef:UniRef50_P44383,UniRef:UniRef90_P44383 contig_6 Pyrodigal gene 347 538 . - . ID=GCA008085315_00579_gene;locus_tag=GCA008085315_00579;gene=rpmC contig_6 Pyrodigal CDS 347 538 . - 0 ID=GCA008085315_00579;Name=50S ribosomal protein L29;locus_tag=GCA008085315_00579;product=50S ribosomal protein L29;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0022625;gene=rpmC;Parent=GCA008085315_00579_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0255,COG:J,RefSeq:WP_005539356.1,SO:0001217,UniParc:UPI0000133E5B,UniRef:UniRef100_P55840,UniRef:UniRef50_P44365,UniRef:UniRef90_Q9CL39 contig_6 Pyrodigal gene 538 948 . - . ID=GCA008085315_00580_gene;locus_tag=GCA008085315_00580;gene=rplP contig_6 Pyrodigal CDS 538 948 . - 0 ID=GCA008085315_00580;Name=50S ribosomal protein L16;locus_tag=GCA008085315_00580;product=50S ribosomal protein L16;Dbxref=GO:0000049,GO:0003735,GO:0006412,GO:0019843,GO:0022625;gene=rplP;Parent=GCA008085315_00580_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0197,COG:J,RefSeq:WP_005539359.1,SO:0001217,UniParc:UPI0000133C2C,UniRef:UniRef100_P55837,UniRef:UniRef50_Q83ER9,UniRef:UniRef90_Q9CL38 contig_6 Pyrodigal gene 962 1669 . - . ID=GCA008085315_00581_gene;locus_tag=GCA008085315_00581;gene=rpsC contig_6 Pyrodigal CDS 962 1669 . - 0 ID=GCA008085315_00581;Name=30S ribosomal protein S3;locus_tag=GCA008085315_00581;product=30S ribosomal protein S3;Dbxref=GO:0003729,GO:0003735,GO:0006412,GO:0019843,GO:0022627;gene=rpsC;Parent=GCA008085315_00581_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0092,COG:J,KEGG:K02982,RefSeq:WP_005545489.1,SO:0001217,UniParc:UPI000016F735,UniRef:UniRef100_P55827,UniRef:UniRef50_P44372,UniRef:UniRef90_P44372 contig_6 Pyrodigal gene 1686 2018 . - . ID=GCA008085315_00582_gene;locus_tag=GCA008085315_00582;gene=rplV contig_6 Pyrodigal CDS 1686 2018 . - 0 ID=GCA008085315_00582;Name=50S ribosomal protein L22;locus_tag=GCA008085315_00582;product=50S ribosomal protein L22;Dbxref=GO:0003735,GO:0006412,GO:0015934,GO:0019843,GO:0022625;gene=rplV;Parent=GCA008085315_00582_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0091,COG:J,KEGG:K02890,RefSeq:WP_005539363.1,SO:0001217,UniParc:UPI0000133D5D,UniRef:UniRef100_P55838,UniRef:UniRef50_P44360,UniRef:UniRef90_P44360 contig_6 Pyrodigal gene 2029 2304 . - . ID=GCA008085315_00583_gene;locus_tag=GCA008085315_00583;gene=rpsS contig_6 Pyrodigal CDS 2029 2304 . - 0 ID=GCA008085315_00583;Name=30S ribosomal protein S19;locus_tag=GCA008085315_00583;product=30S ribosomal protein S19;Dbxref=GO:0000028,GO:0003735,GO:0005737,GO:0006412,GO:0015935,GO:0019843;gene=rpsS;Parent=GCA008085315_00583_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0185,COG:J,RefSeq:WP_005539416.1,SO:0001217,UniParc:UPI0000164BD3,UniRef:UniRef100_P67899,UniRef:UniRef50_P21476,UniRef:UniRef90_P67899 contig_6 Pyrodigal gene 2330 3151 . - . ID=GCA008085315_00584_gene;locus_tag=GCA008085315_00584;gene=rplB contig_6 Pyrodigal CDS 2330 3151 . - 0 ID=GCA008085315_00584;Name=50S ribosomal protein L2;locus_tag=GCA008085315_00584;product=50S ribosomal protein L2;Dbxref=GO:0002181,GO:0003723,GO:0003735,GO:0006412,GO:0015934,GO:0016740,GO:0019843;gene=rplB;Parent=GCA008085315_00584_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0090,COG:J,RefSeq:WP_005545487.1,SO:0001217,UniParc:UPI000016F734,UniRef:UniRef100_P55835,UniRef:UniRef50_P44343,UniRef:UniRef90_P44343 contig_6 Pyrodigal gene 3172 3474 . - . ID=GCA008085315_00585_gene;locus_tag=GCA008085315_00585;gene=rplW contig_6 Pyrodigal CDS 3172 3474 . - 0 ID=GCA008085315_00585;Name=50S ribosomal protein L23;locus_tag=GCA008085315_00585;product=50S ribosomal protein L23;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:1990904;gene=rplW;Parent=GCA008085315_00585_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0089,COG:J,RefSeq:WP_005545486.1,SO:0001217,UniParc:UPI0000133D8E,UniRef:UniRef100_P55839,UniRef:UniRef50_P0ADZ0,UniRef:UniRef90_Q9CL34 contig_6 Pyrodigal gene 3471 4073 . - . ID=GCA008085315_00586_gene;locus_tag=GCA008085315_00586;gene=rplD contig_6 Pyrodigal CDS 3471 4073 . - 0 ID=GCA008085315_00586;Name=50S ribosomal protein L4;locus_tag=GCA008085315_00586;product=50S ribosomal protein L4;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:0022625,GO:1990904;gene=rplD;Parent=GCA008085315_00586_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0088,COG:J,RefSeq:WP_005545485.1,SO:0001217,UniParc:UPI00001340E2,UniRef:UniRef100_P55836,UniRef:UniRef50_P44345,UniRef:UniRef90_P44345 contig_6 Pyrodigal gene 4089 4715 . - . ID=GCA008085315_00587_gene;locus_tag=GCA008085315_00587;gene=rplC contig_6 Pyrodigal CDS 4089 4715 . - 0 ID=GCA008085315_00587;Name=50S ribosomal protein L3;locus_tag=GCA008085315_00587;product=50S ribosomal protein L3;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:0022625;gene=rplC;Parent=GCA008085315_00587_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0087,COG:J,KEGG:K02906,RefSeq:WP_005545484.1,SO:0001217,UniParc:UPI0001B9F3AA,UniRef:UniRef100_E6KVD0,UniRef:UniRef50_Q7NQF2,UniRef:UniRef90_P44344 contig_6 Pyrodigal gene 4732 5043 . - . ID=GCA008085315_00588_gene;locus_tag=GCA008085315_00588;gene=rpsJ_V57L contig_6 Pyrodigal CDS 4732 5043 . - 0 ID=GCA008085315_00588;Name=30S ribosomal protein S10;locus_tag=GCA008085315_00588;product=30S ribosomal protein S10;Dbxref=GO:0000049,GO:0003723,GO:0003735,GO:0005840,GO:0006412,GO:1990904;gene=rpsJ_V57L;Parent=GCA008085315_00588_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0051,COG:J,RefSeq:WP_001181005.1,SO:0001217,UniParc:UPI000005A7ED,UniRef:UniRef100_A8AQM1,UniRef:UniRef50_Q889X2,UniRef:UniRef90_A8AQM1 contig_6 Pyrodigal gene 5295 6191 . - . ID=GCA008085315_00589_gene;locus_tag=GCA008085315_00589;gene=lysR contig_6 Pyrodigal CDS 5295 6191 . - 0 ID=GCA008085315_00589;Name=LysR family transcriptional regulator;locus_tag=GCA008085315_00589;product=LysR family transcriptional regulator;gene=lysR;Parent=GCA008085315_00589_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0583,COG:K,RefSeq:WP_005539430.1,SO:0001217,UniParc:UPI0001B9F3AB,UniRef:UniRef100_A0A142FZ72,UniRef:UniRef50_P44876,UniRef:UniRef90_A0A142FZ72 contig_6 Pyrodigal gene 6466 7119 . + . ID=GCA008085315_00590_gene;locus_tag=GCA008085315_00590;gene=atoD contig_6 Pyrodigal CDS 6466 7119 . + 0 ID=GCA008085315_00590;Name=acetate CoA-transferase subunit alpha;locus_tag=GCA008085315_00590;product=acetate CoA-transferase subunit alpha;gene=atoD;Parent=GCA008085315_00590_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005539432.1,SO:0001217,UniParc:UPI0001CA7A8A,UniRef:UniRef100_A0A142FZ73,UniRef:UniRef50_A0A6I5AA78,UniRef:UniRef90_A0A142FZ73;ec_number=2.8.3.9 contig_6 Pyrodigal gene 7131 7796 . + . ID=GCA008085315_00591_gene;locus_tag=GCA008085315_00591;gene=atoA contig_6 Pyrodigal CDS 7131 7796 . + 0 ID=GCA008085315_00591;Name=Acetate CoA-transferase;locus_tag=GCA008085315_00591;product=Acetate CoA-transferase;gene=atoA;Parent=GCA008085315_00591_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2057,COG:I,RefSeq:WP_005545481.1,SO:0001217,UniParc:UPI0001B9F3AD,UniRef:UniRef100_UPI0001B9F3AD,UniRef:UniRef50_P44874,UniRef:UniRef90_A0A5D0EIH7 contig_6 Pyrodigal gene 7799 9142 . + . ID=GCA008085315_00592_gene;locus_tag=GCA008085315_00592;gene=atoE contig_6 Pyrodigal CDS 7799 9142 . + 0 ID=GCA008085315_00592;Name=Short-chain fatty acid transporter;locus_tag=GCA008085315_00592;product=Short-chain fatty acid transporter;gene=atoE;Parent=GCA008085315_00592_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2031,COG:I,KEGG:K02106,RefSeq:WP_005545480.1,SO:0001217,UniParc:UPI00022C013F,UniRef:UniRef100_UPI00022C013F,UniRef:UniRef50_P76460,UniRef:UniRef90_A0A142FZ75 contig_6 Pyrodigal gene 9160 10341 . + . ID=GCA008085315_00593_gene;locus_tag=GCA008085315_00593;gene=paaJ contig_6 Pyrodigal CDS 9160 10341 . + 0 ID=GCA008085315_00593;Name=Acetyl-CoA C-acetyltransferase;locus_tag=GCA008085315_00593;product=Acetyl-CoA C-acetyltransferase;gene=paaJ;Parent=GCA008085315_00593_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0183,COG:I,RefSeq:WP_148321103.1,SO:0001217,UniParc:UPI0011D58660,UniRef:UniRef100_UPI0011D58660,UniRef:UniRef50_P44873,UniRef:UniRef90_A0A142FZ76 contig_6 Pyrodigal gene 10439 10906 . - . ID=GCA008085315_00594_gene;locus_tag=GCA008085315_00594;gene=lrp contig_6 Pyrodigal CDS 10439 10906 . - 0 ID=GCA008085315_00594;Name=Lrp family transcriptional regulator;locus_tag=GCA008085315_00594;product=Lrp family transcriptional regulator;gene=lrp;Parent=GCA008085315_00594_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1522,COG:K,RefSeq:WP_005539439.1,SO:0001217,UniParc:UPI0001B9F3B0,UniRef:UniRef100_A0A142FZ77,UniRef:UniRef50_A0A1V4AYP1,UniRef:UniRef90_E6KVC8 contig_6 Pyrodigal gene 10997 12526 . - . ID=GCA008085315_00595_gene;locus_tag=GCA008085315_00595;gene=yfcC contig_6 Pyrodigal CDS 10997 12526 . - 0 ID=GCA008085315_00595;Name=YfcC family protein;locus_tag=GCA008085315_00595;product=YfcC family protein;gene=yfcC;Parent=GCA008085315_00595_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1288,COG:R,RefSeq:WP_005539441.1,SO:0001217,UniParc:UPI0001B9F3B1,UniRef:UniRef100_A0A5D0EJ49,UniRef:UniRef50_P44023,UniRef:UniRef90_A0A5D0EJ49 contig_6 Pyrodigal gene 12643 13575 . - . ID=GCA008085315_00596_gene;locus_tag=GCA008085315_00596;gene=arcC contig_6 Pyrodigal CDS 12643 13575 . - 0 ID=GCA008085315_00596;Name=carbamate kinase;locus_tag=GCA008085315_00596;product=carbamate kinase;Dbxref=GO:0005524,GO:0005829,GO:0006520,GO:0008804,GO:0019546;gene=arcC;Parent=GCA008085315_00596_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0549,COG:E,RefSeq:WP_148334020.1,SO:0001217,UniParc:UPI0011D5B61C,UniRef:UniRef100_UPI0011D5B61C,UniRef:UniRef50_P13982,UniRef:UniRef90_P44769;ec_number=2.7.2.2 contig_6 Pyrodigal gene 13585 14589 . - . ID=GCA008085315_00597_gene;locus_tag=GCA008085315_00597;gene=arcB contig_6 Pyrodigal CDS 13585 14589 . - 0 ID=GCA008085315_00597;Name=ornithine carbamoyltransferase;locus_tag=GCA008085315_00597;product=ornithine carbamoyltransferase;Dbxref=GO:0004585,GO:0005737,GO:0006520,GO:0006591,GO:0016597,GO:0019240,GO:0019547,GO:0042450;gene=arcB;Parent=GCA008085315_00597_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0078,COG:E,KEGG:K00611,RefSeq:WP_005574866.1,SO:0001217,UniParc:UPI0001B9F426,UniRef:UniRef100_UPI0001B9F426,UniRef:UniRef50_P08308,UniRef:UniRef90_P44770;ec_number=2.1.3.3 contig_6 Pyrodigal gene 14832 16223 . + . ID=GCA008085315_00598_gene;locus_tag=GCA008085315_00598;gene=clcA contig_6 Pyrodigal CDS 14832 16223 . + 0 ID=GCA008085315_00598;Name=Chloride channel protein;locus_tag=GCA008085315_00598;product=Chloride channel protein;gene=clcA;Parent=GCA008085315_00598_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0038,COG:P,RefSeq:WP_148321492.1,SO:0001217,UniParc:UPI0011DB8B94,UniRef:UniRef100_UPI0011DB8B94,UniRef:UniRef50_A0A378VPP9,UniRef:UniRef90_A0A5D0EL10 contig_6 Pyrodigal gene 16226 17209 . + . ID=GCA008085315_00599_gene;locus_tag=GCA008085315_00599;gene=dusA contig_6 Pyrodigal CDS 16226 17209 . + 0 ID=GCA008085315_00599;Name=tRNA dihydrouridine(20/20a) synthase DusA;locus_tag=GCA008085315_00599;product=tRNA dihydrouridine(20/20a) synthase DusA;Dbxref=GO:0002943,GO:0017150,GO:0050660;gene=dusA;Parent=GCA008085315_00599_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0042,COG:J,KEGG:K05539,RefSeq:WP_005574861.1,SO:0001217,UniParc:UPI0001B9F428,UniRef:UniRef100_UPI0001B9F428,UniRef:UniRef50_P44794,UniRef:UniRef90_G4A6P1;ec_number=1.3.1.91 contig_6 Pyrodigal gene 17265 18257 . - . ID=GCA008085315_00600_gene;locus_tag=GCA008085315_00600;gene=asnA contig_6 Pyrodigal CDS 17265 18257 . - 0 ID=GCA008085315_00600;Name=aspartate--ammonia ligase;locus_tag=GCA008085315_00600;product=aspartate--ammonia ligase;Dbxref=GO:0004071,GO:0005524,GO:0005737,GO:0005829,GO:0006529,GO:0070981;gene=asnA;Parent=GCA008085315_00600_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2502,COG:E,KEGG:K01914,RefSeq:WP_005539460.1,SO:0001217,UniParc:UPI0001B9F429,UniRef:UniRef100_A0A142FZ83,UniRef:UniRef50_P00963,UniRef:UniRef90_P44338;ec_number=6.3.1.1 contig_6 Pyrodigal gene 18423 18875 . + . ID=GCA008085315_00601_gene;locus_tag=GCA008085315_00601;gene=asnC contig_6 Pyrodigal CDS 18423 18875 . + 0 ID=GCA008085315_00601;Name=transcriptional regulator AsnC;locus_tag=GCA008085315_00601;product=transcriptional regulator AsnC;Dbxref=GO:0043565;gene=asnC;Parent=GCA008085315_00601_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1522,COG:K,RefSeq:WP_005548336.1,SO:0001217,UniParc:UPI0001B9F42A,UniRef:UniRef100_UPI0001B9F42A,UniRef:UniRef50_P44337,UniRef:UniRef90_P44337 contig_6 Pyrodigal gene 18909 19667 . + . ID=GCA008085315_00602_gene;locus_tag=GCA008085315_00602;gene=udp contig_6 Pyrodigal CDS 18909 19667 . + 0 ID=GCA008085315_00602;Name=uridine phosphorylase;locus_tag=GCA008085315_00602;product=uridine phosphorylase;Dbxref=GO:0009116,GO:0016763;gene=udp;Parent=GCA008085315_00602_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2820,COG:F,KEGG:K00757,RefSeq:WP_005539464.1,SO:0001217,UniParc:UPI0001B9F42B,UniRef:UniRef100_A0A142FZ85,UniRef:UniRef50_P12758,UniRef:UniRef90_A0A336N9N4;ec_number=2.4.2.3 contig_6 Pyrodigal gene 19805 20866 . - . ID=GCA008085315_00603_gene;locus_tag=GCA008085315_00603;gene=perM contig_6 Pyrodigal CDS 19805 20866 . - 0 ID=GCA008085315_00603;Name=PerM family permease;locus_tag=GCA008085315_00603;product=PerM family permease;gene=perM;Parent=GCA008085315_00603_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0628,COG:R,KEGG:K03548,RefSeq:WP_005548335.1,SO:0001217,UniParc:UPI0001B9F42C,UniRef:UniRef100_UPI0001B9F42C,UniRef:UniRef50_P0AFI9,UniRef:UniRef90_E6KZV9 contig_6 Pyrodigal gene 20940 21290 . + . ID=GCA008085315_00604_gene;locus_tag=GCA008085315_00604;gene=arsC contig_6 Pyrodigal CDS 20940 21290 . + 0 ID=GCA008085315_00604;Name=arsenate reductase (glutaredoxin);locus_tag=GCA008085315_00604;product=arsenate reductase (glutaredoxin);Dbxref=GO:0008794,GO:0046685;gene=arsC;Parent=GCA008085315_00604_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1393,COG:P,KEGG:K00537,RefSeq:WP_005548334.1,SO:0001217,UniParc:UPI0001B9F42D,UniRef:UniRef100_UPI0001B9F42D,UniRef:UniRef50_P44589,UniRef:UniRef90_A0A5D0EIZ2;ec_number=1.20.4.1 contig_6 Pyrodigal gene 21394 21690 . - . ID=GCA008085315_00605_gene;locus_tag=GCA008085315_00605 contig_6 Pyrodigal CDS 21394 21690 . - 0 ID=GCA008085315_00605;Name=Dithiol-disulfide isomerase;locus_tag=GCA008085315_00605;product=Dithiol-disulfide isomerase;Parent=GCA008085315_00605_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_Q9CLT1,UniRef:UniRef90_G4A6N5 contig_6 Pyrodigal gene 21707 21991 . - . ID=GCA008085315_00606_gene;locus_tag=GCA008085315_00606;gene=arfA contig_6 Pyrodigal CDS 21707 21991 . - 0 ID=GCA008085315_00606;Name=Alternative ribosome-rescue factor A;locus_tag=GCA008085315_00606;product=Alternative ribosome-rescue factor A;gene=arfA;Parent=GCA008085315_00606_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3036,COG:J,KEGG:K09890,RefSeq:WP_005539471.1,SO:0001217,UniParc:UPI0001B9F42F,UniRef:UniRef100_A0A142FZ89,UniRef:UniRef50_P44588,UniRef:UniRef90_G4A6N4 contig_6 Pyrodigal gene 22200 23531 . + . ID=GCA008085315_00607_gene;locus_tag=GCA008085315_00607;gene=rimO contig_6 Pyrodigal CDS 22200 23531 . + 0 ID=GCA008085315_00607;Name=30S ribosomal protein S12 methylthiotransferase RimO;locus_tag=GCA008085315_00607;product=30S ribosomal protein S12 methylthiotransferase RimO;Dbxref=GO:0005737,GO:0008172,GO:0016740,GO:0016782,GO:0018339,GO:0051539,GO:1904047;gene=rimO;Parent=GCA008085315_00607_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0621,COG:J,RefSeq:WP_148321105.1,SO:0001217,UniParc:UPI0011DBACEA,UniRef:UniRef100_UPI0011DBACEA,UniRef:UniRef50_Q4FRH4,UniRef:UniRef90_A0A5D0EKR4;ec_number=2.8.4.4 contig_6 Pyrodigal gene 23587 24060 . + . ID=GCA008085315_00608_gene;locus_tag=GCA008085315_00608;gene=wzb contig_6 Pyrodigal CDS 23587 24060 . + 0 ID=GCA008085315_00608;Name=protein-tyrosine-phosphatase;locus_tag=GCA008085315_00608;product=protein-tyrosine-phosphatase;gene=wzb;Parent=GCA008085315_00608_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0394,COG:T,RefSeq:WP_025298109.1,SO:0001217,UniParc:UPI00046C95F5,UniRef:UniRef100_UPI0002434812,UniRef:UniRef50_Q9CKP0,UniRef:UniRef90_A0A142FZ91 contig_6 Pyrodigal gene 24187 24405 . + . ID=GCA008085315_00609_gene;locus_tag=GCA008085315_00609;gene=ydcH contig_6 Pyrodigal CDS 24187 24405 . + 0 ID=GCA008085315_00609;Name=YdcH family protein;locus_tag=GCA008085315_00609;product=YdcH family protein;gene=ydcH;Parent=GCA008085315_00609_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2841,COG:S,KEGG:K09794,RefSeq:WP_005548330.1,SO:0001217,UniParc:UPI0001B9F432,UniRef:UniRef100_UPI0001B9F432,UniRef:UniRef50_A3N1H0,UniRef:UniRef90_UPI00197B3B0B contig_6 Pyrodigal gene 24477 25073 . - . ID=GCA008085315_00610_gene;locus_tag=GCA008085315_00610;gene=slyD contig_6 Pyrodigal CDS 24477 25073 . - 0 ID=GCA008085315_00610;Name=peptidylprolyl isomerase;locus_tag=GCA008085315_00610;product=peptidylprolyl isomerase;Dbxref=GO:0003755;gene=slyD;Parent=GCA008085315_00610_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1047,COG:O,RefSeq:WP_005572783.1,SO:0001217,UniParc:UPI00022AD08F,UniRef:UniRef100_UPI00022AD08F,UniRef:UniRef50_Q9CKP2,UniRef:UniRef90_A0A2M8RTX6;ec_number=5.2.1.8 contig_6 Pyrodigal gene 25168 25887 . - . ID=GCA008085315_00611_gene;locus_tag=GCA008085315_00611 contig_6 Pyrodigal CDS 25168 25887 . - 0 ID=GCA008085315_00611;Name=Periplasmic/secreted protein;locus_tag=GCA008085315_00611;product=Periplasmic/secreted protein;Parent=GCA008085315_00611_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3471,COG:S,RefSeq:WP_148321106.1,SO:0001217,UniParc:UPI0011D393A3,UniRef:UniRef100_UPI0011D393A3,UniRef:UniRef50_E6KZW7,UniRef:UniRef90_G4A6M9 contig_6 Pyrodigal gene 25938 26372 . - . ID=GCA008085315_00612_gene;locus_tag=GCA008085315_00612;gene=rraB contig_6 Pyrodigal CDS 25938 26372 . - 0 ID=GCA008085315_00612;Name=ribonuclease E inhibitor RraB;locus_tag=GCA008085315_00612;product=ribonuclease E inhibitor RraB;gene=rraB;Parent=GCA008085315_00612_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3076,COG:J,RefSeq:WP_005539482.1,SO:0001217,UniParc:UPI0001B9F435,UniRef:UniRef100_A0A5D0EIJ1,UniRef:UniRef50_U3TS73,UniRef:UniRef90_A0A5D0EIJ1 contig_6 Pyrodigal gene 26467 26862 . - . ID=GCA008085315_00613_gene;locus_tag=GCA008085315_00613;gene=mscL contig_6 Pyrodigal CDS 26467 26862 . - 0 ID=GCA008085315_00613;Name=large-conductance mechanosensitive channel protein MscL;locus_tag=GCA008085315_00613;product=large-conductance mechanosensitive channel protein MscL;Dbxref=GO:0008381,GO:0034220;gene=mscL;Parent=GCA008085315_00613_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1970,COG:M,KEGG:K03282,RefSeq:WP_005539483.1,SO:0001217,UniParc:UPI0001CA7A7A,UniRef:UniRef100_A0A142FZ95,UniRef:UniRef50_B2VK97,UniRef:UniRef90_A0A142FZ95 contig_6 Pyrodigal gene 26972 28348 . - . ID=GCA008085315_00614_gene;locus_tag=GCA008085315_00614;gene=trkA contig_6 Pyrodigal CDS 26972 28348 . - 0 ID=GCA008085315_00614;Name=Trk system potassium transporter TrkA;locus_tag=GCA008085315_00614;product=Trk system potassium transporter TrkA;Dbxref=GO:0006813,GO:0015079,GO:0016020;gene=trkA;Parent=GCA008085315_00614_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0569,COG:PT,RefSeq:WP_005548326.1,SO:0001217,UniParc:UPI0001B9F437,UniRef:UniRef100_UPI0001B9F437,UniRef:UniRef50_P0AGI8,UniRef:UniRef90_A0A5D0EI65 contig_6 Pyrodigal gene 28372 29727 . - . ID=GCA008085315_00615_gene;locus_tag=GCA008085315_00615;gene=rsmB contig_6 Pyrodigal CDS 28372 29727 . - 0 ID=GCA008085315_00615;Name=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;locus_tag=GCA008085315_00615;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;Dbxref=GO:0001510,GO:0003723,GO:0006355,GO:0006364,GO:0008649;gene=rsmB;Parent=GCA008085315_00615_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0781,COG:K,KEGG:K03500,RefSeq:WP_012820802.1,SO:0001217,UniParc:UPI0001B9F438,UniRef:UniRef100_UPI0001B9F438,UniRef:UniRef50_Q9CKP7,UniRef:UniRef90_A0A5D0EJ04;ec_number=2.1.1.176 contig_6 Pyrodigal gene 29727 30686 . - . ID=GCA008085315_00616_gene;locus_tag=GCA008085315_00616;gene=fmt contig_6 Pyrodigal CDS 29727 30686 . - 0 ID=GCA008085315_00616;Name=methionyl-tRNA formyltransferase;locus_tag=GCA008085315_00616;product=methionyl-tRNA formyltransferase;Dbxref=GO:0004479,GO:0005737,GO:0071951;gene=fmt;Parent=GCA008085315_00616_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0223,COG:J,SO:0001217,UniRef:UniRef50_Q8EKQ9,UniRef:UniRef90_A0A5D0EM78;ec_number=2.1.2.9 contig_6 Pyrodigal gene 30749 31261 . - . ID=GCA008085315_00617_gene;locus_tag=GCA008085315_00617;gene=def contig_6 Pyrodigal CDS 30749 31261 . - 0 ID=GCA008085315_00617;Name=peptide deformylase;locus_tag=GCA008085315_00617;product=peptide deformylase;Dbxref=GO:0036211,GO:0042586;gene=def;Parent=GCA008085315_00617_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0242,COG:J,KEGG:K01462,RefSeq:WP_005539504.1,SO:0001217,UniParc:UPI0001B9F43A,UniRef:UniRef100_A0A5D0EJ66,UniRef:UniRef50_P0A6K3,UniRef:UniRef90_A0A5D0EJ66;ec_number=3.5.1.88 ##sequence-region contig_7 1 16135 contig_7 Bakta region 1 16135 . + . ID=contig_7;Name=contig_7 contig_7 Pyrodigal gene 54 1211 . - . ID=GCA008085315_00618_gene;locus_tag=GCA008085315_00618;gene=rnd contig_7 Pyrodigal CDS 54 1211 . - 0 ID=GCA008085315_00618;Name=ribonuclease D;locus_tag=GCA008085315_00618;product=ribonuclease D;Dbxref=GO:0006396,GO:0008408,GO:0033890;gene=rnd;Parent=GCA008085315_00618_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0349,COG:J,KEGG:K03684,RefSeq:WP_005547999.1,SO:0001217,UniParc:UPI0001B9F840,UniRef:UniRef100_UPI0001B9F840,UniRef:UniRef50_P44442,UniRef:UniRef90_A0A142G2Z8;ec_number=3.1.13.5 contig_7 Pyrodigal gene 1294 2970 . - . ID=GCA008085315_00619_gene;locus_tag=GCA008085315_00619;gene=fadD contig_7 Pyrodigal CDS 1294 2970 . - 0 ID=GCA008085315_00619;Name=long-chain-fatty-acid--CoA ligase FadD;locus_tag=GCA008085315_00619;product=long-chain-fatty-acid--CoA ligase FadD;gene=fadD;Parent=GCA008085315_00619_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0318,COG:I,RefSeq:WP_148320563.1,SO:0001217,UniParc:UPI0011DA0BEC,UniRef:UniRef100_UPI0011DA0BEC,UniRef:UniRef50_P46450,UniRef:UniRef90_E6KX27;ec_number=6.2.1.3 contig_7 Pyrodigal gene 3013 3570 . - . ID=GCA008085315_00620_gene;locus_tag=GCA008085315_00620;gene=slp contig_7 Pyrodigal CDS 3013 3570 . - 0 ID=GCA008085315_00620;Name=Slp family lipoprotein;locus_tag=GCA008085315_00620;product=Slp family lipoprotein;gene=slp;Parent=GCA008085315_00620_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3065,COG:M,RefSeq:WP_005543658.1,SO:0001217,UniParc:UPI0001CA759D,UniRef:UniRef100_A0A142G2Z5,UniRef:UniRef50_A0A1V3L057,UniRef:UniRef90_A0A142G2Z5 contig_7 Pyrodigal gene 3602 4324 . - . ID=GCA008085315_00621_gene;locus_tag=GCA008085315_00621;gene=tsaB contig_7 Pyrodigal CDS 3602 4324 . - 0 ID=GCA008085315_00621;Name=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;locus_tag=GCA008085315_00621;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;Dbxref=GO:0002949;gene=tsaB;Parent=GCA008085315_00621_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1214,COG:J,RefSeq:WP_005548005.1,SO:0001217,UniParc:UPI0001B9F843,UniRef:UniRef100_UPI0006A6E381,UniRef:UniRef50_P43990,UniRef:UniRef90_E6KX25;ec_number=2.3.1.234 contig_7 Pyrodigal gene 4327 6264 . - . ID=GCA008085315_00622_gene;locus_tag=GCA008085315_00622;gene=dinG contig_7 Pyrodigal CDS 4327 6264 . - 0 ID=GCA008085315_00622;Name=DNA 5'-3' helicase;locus_tag=GCA008085315_00622;product=DNA 5'-3' helicase;gene=dinG;Parent=GCA008085315_00622_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1199,COG:L,KEGG:K03722,RefSeq:WP_148320565.1,SO:0001217,UniParc:UPI0011D7FA0B,UniRef:UniRef100_UPI0011D7FA0B,UniRef:UniRef50_K6WYN1,UniRef:UniRef90_A0A142G3F4;ec_number=5.6.2.3 contig_7 Pyrodigal gene 6340 7158 . + . ID=GCA008085315_00623_gene;locus_tag=GCA008085315_00623;gene=yeaD contig_7 Pyrodigal CDS 6340 7158 . + 0 ID=GCA008085315_00623;Name=Putative glucose-6-phosphate 1-epimerase;locus_tag=GCA008085315_00623;product=Putative glucose-6-phosphate 1-epimerase;gene=yeaD;Parent=GCA008085315_00623_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0676,COG:G,RefSeq:WP_005567336.1,SO:0001217,UniParc:UPI0001B9F845,UniRef:UniRef100_UPI0001B9F845,UniRef:UniRef50_P44160,UniRef:UniRef90_A0A5D0EKG5 contig_7 Pyrodigal gene 7568 8425 . + . ID=GCA008085315_00624_gene;locus_tag=GCA008085315_00624;gene=cnoX contig_7 Pyrodigal CDS 7568 8425 . + 0 ID=GCA008085315_00624;Name=Co-chaperone YbbN;locus_tag=GCA008085315_00624;product=Co-chaperone YbbN;gene=cnoX;Parent=GCA008085315_00624_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3118,COG:O,RefSeq:WP_005548014.1,SO:0001217,UniParc:UPI0001B9F846,UniRef:UniRef100_UPI0001B9F846,UniRef:UniRef50_P43786,UniRef:UniRef90_A0A142G2J3 contig_7 Pyrodigal gene 8485 9438 . + . ID=GCA008085315_00625_gene;locus_tag=GCA008085315_00625;gene=trxB contig_7 Pyrodigal CDS 8485 9438 . + 0 ID=GCA008085315_00625;Name=thioredoxin-disulfide reductase;locus_tag=GCA008085315_00625;product=thioredoxin-disulfide reductase;Dbxref=GO:0004791,GO:0005737,GO:0019430,GO:0071949;gene=trxB;Parent=GCA008085315_00625_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0492,COG:O,KEGG:K00384,RefSeq:WP_005548017.1,SO:0001217,UniParc:UPI0001B9F847,UniRef:UniRef100_UPI0001B9F847,UniRef:UniRef50_P43788,UniRef:UniRef90_A0A380TRL2;ec_number=1.8.1.9 contig_7 Pyrodigal gene 9544 11307 . + . ID=GCA008085315_00626_gene;locus_tag=GCA008085315_00626;gene=cydD contig_7 Pyrodigal CDS 9544 11307 . + 0 ID=GCA008085315_00626;Name=heme ABC transporter permease/ATP-binding protein CydD;locus_tag=GCA008085315_00626;product=heme ABC transporter permease/ATP-binding protein CydD;Dbxref=GO:0005524,GO:0016020,GO:0140359;gene=cydD;Parent=GCA008085315_00626_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CO,COG:COG4988,RefSeq:WP_005548020.1,SO:0001217,UniParc:UPI0001B9F848,UniRef:UniRef100_UPI0001B9F848,UniRef:UniRef50_P29018,UniRef:UniRef90_E6KX14;ec_number=7.4.2.- contig_7 Pyrodigal gene 11307 13040 . + . ID=GCA008085315_00627_gene;locus_tag=GCA008085315_00627;gene=cydC contig_7 Pyrodigal CDS 11307 13040 . + 0 ID=GCA008085315_00627;Name=heme ABC transporter ATP-binding protein/permease CydC;locus_tag=GCA008085315_00627;product=heme ABC transporter ATP-binding protein/permease CydC;Dbxref=GO:0005524,GO:0016020,GO:0042626,GO:0045454,GO:0140359;gene=cydC;Parent=GCA008085315_00627_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CO,COG:COG4987,RefSeq:WP_005548022.1,SO:0001217,UniParc:UPI0001B9F849,UniRef:UniRef100_UPI0001B9F849,UniRef:UniRef50_P45081,UniRef:UniRef90_A0A5D0EMG7;ec_number=7.4.2.- contig_7 Infernal gene 13064 13162 . - . ID=GCA008085315_00628_gene;locus_tag=GCA008085315_00628;gene=Bacteria_small_SRP contig_7 Infernal ncRNA 13064 13162 4.6e-11 - . ID=GCA008085315_00628;Name=Bacterial small signal recognition particle RNA;locus_tag=GCA008085315_00628;product=Bacterial small signal recognition particle RNA;Dbxref=RFAM:RF00169;Parent=GCA008085315_00628_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00169 contig_7 Pyrodigal gene 13423 13551 . - . ID=GCA008085315_00629_gene;locus_tag=GCA008085315_00629 contig_7 Pyrodigal CDS 13423 13551 . - 0 ID=GCA008085315_00629;Name=Lipoprotein;locus_tag=GCA008085315_00629;product=Lipoprotein;Parent=GCA008085315_00629_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005542417.1,SO:0001217,UniParc:UPI0001B9F84A,UniRef:UniRef100_G4A6X9,UniRef:UniRef50_E6KX10,UniRef:UniRef90_G4A6X9 contig_7 Pyrodigal gene 13548 14288 . - . ID=GCA008085315_00630_gene;locus_tag=GCA008085315_00630;gene=bud32 contig_7 Pyrodigal CDS 13548 14288 . - 0 ID=GCA008085315_00630;Name=Protein kinase family protein;locus_tag=GCA008085315_00630;product=Protein kinase family protein;gene=bud32;Parent=GCA008085315_00630_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3642,COG:J,RefSeq:WP_148320569.1,SO:0001217,UniParc:UPI0011D84A48,UniRef:UniRef100_UPI0011D84A48,UniRef:UniRef50_U1QJ33,UniRef:UniRef90_A0A142G2I9 contig_7 Pyrodigal gene 14354 14998 . - . ID=GCA008085315_00631_gene;locus_tag=GCA008085315_00631 contig_7 Pyrodigal CDS 14354 14998 . - 0 ID=GCA008085315_00631;Name=Lipoprotein;locus_tag=GCA008085315_00631;product=Lipoprotein;Parent=GCA008085315_00631_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148320571.1,SO:0001217,UniParc:UPI0011DA618F,UniRef:UniRef100_UPI0011DA618F,UniRef:UniRef50_E6KX08,UniRef:UniRef90_A0A5D0EKR2 contig_7 Pyrodigal gene 15086 15670 . + . ID=GCA008085315_00632_gene;locus_tag=GCA008085315_00632 contig_7 Pyrodigal CDS 15086 15670 . + 0 ID=GCA008085315_00632;Name=Outer-membrane lipoprotein carrier protein;locus_tag=GCA008085315_00632;product=Outer-membrane lipoprotein carrier protein;Parent=GCA008085315_00632_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148334021.1,SO:0001217,UniParc:UPI0011DC135B,UniRef:UniRef100_UPI0011DC135B,UniRef:UniRef50_E6KX07,UniRef:UniRef90_G4A6X6 ##sequence-region contig_8 1 8839 contig_8 Bakta region 1 8839 . + . ID=contig_8;Name=contig_8 contig_8 Pyrodigal gene 119 508 . - . ID=GCA008085315_00633_gene;locus_tag=GCA008085315_00633;gene=rplQ contig_8 Pyrodigal CDS 119 508 . - 0 ID=GCA008085315_00633;Name=50S ribosomal protein L17;locus_tag=GCA008085315_00633;product=50S ribosomal protein L17;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0022625;gene=rplQ;Parent=GCA008085315_00633_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0203,COG:J,KEGG:K02879,RefSeq:WP_148321112.1,SO:0001217,UniParc:UPI0011D644EB,UniRef:UniRef100_UPI0011D644EB,UniRef:UniRef50_P44355,UniRef:UniRef90_Q9CL54 contig_8 Pyrodigal gene 550 1539 . - . ID=GCA008085315_00634_gene;locus_tag=GCA008085315_00634;gene=rpoA contig_8 Pyrodigal CDS 550 1539 . - 0 ID=GCA008085315_00634;Name=DNA-directed RNA polymerase subunit alpha;locus_tag=GCA008085315_00634;product=DNA-directed RNA polymerase subunit alpha;Dbxref=GO:0000428,GO:0001054,GO:0001055,GO:0001056,GO:0001057,GO:0001058,GO:0001066,GO:0003677,GO:0003899,GO:0005737,GO:0006351,GO:0046983;gene=rpoA;Parent=GCA008085315_00634_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0202,COG:K,RefSeq:WP_005548752.1,SO:0001217,UniParc:UPI0001B9F1B8,UniRef:UniRef100_UPI0001B9F1B8,UniRef:UniRef50_P0A0Y1,UniRef:UniRef90_P43737;ec_number=2.7.7.6 contig_8 Pyrodigal gene 1568 2188 . - . ID=GCA008085315_00635_gene;locus_tag=GCA008085315_00635;gene=rpsD contig_8 Pyrodigal CDS 1568 2188 . - 0 ID=GCA008085315_00635;Name=30S ribosomal protein S4;locus_tag=GCA008085315_00635;product=30S ribosomal protein S4;Dbxref=GO:0003735,GO:0006412,GO:0015935,GO:0019843,GO:0042274;gene=rpsD;Parent=GCA008085315_00635_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0522,COG:J,KEGG:K02986,RefSeq:WP_005548754.1,SO:0001217,UniParc:UPI0001B9F1B7,UniRef:UniRef100_UPI0001B9F1B7,UniRef:UniRef50_O54297,UniRef:UniRef90_P44373 contig_8 Pyrodigal gene 2218 2607 . - . ID=GCA008085315_00636_gene;locus_tag=GCA008085315_00636;gene=rpsK contig_8 Pyrodigal CDS 2218 2607 . - 0 ID=GCA008085315_00636;Name=30S ribosomal protein S11;locus_tag=GCA008085315_00636;product=30S ribosomal protein S11;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:1990904;gene=rpsK;Parent=GCA008085315_00636_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0100,COG:J,KEGG:K02948,RefSeq:WP_005543603.1,SO:0001217,UniParc:UPI000039A4AF,UniRef:UniRef100_Q4QM99,UniRef:UniRef50_Q6N4V6,UniRef:UniRef90_P44379 contig_8 Pyrodigal gene 2623 2979 . - . ID=GCA008085315_00637_gene;locus_tag=GCA008085315_00637;gene=rpsM contig_8 Pyrodigal CDS 2623 2979 . - 0 ID=GCA008085315_00637;Name=30S ribosomal protein S13;locus_tag=GCA008085315_00637;product=30S ribosomal protein S13;Dbxref=GO:0000049,GO:0003723,GO:0003735,GO:0005829,GO:0005840,GO:0006412,GO:0015935,GO:0019843;gene=rpsM;Parent=GCA008085315_00637_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0099,COG:J,KEGG:K02952,RefSeq:WP_005548758.1,SO:0001217,UniParc:UPI0001B9F1B5,UniRef:UniRef100_A0A1B8T5L9,UniRef:UniRef50_Q8DML1,UniRef:UniRef90_Q9CL51 contig_8 Infernal regulatory_region 2947 3063 1.3e-15 - . ID=FFLMJBKAJI_97;Name=Alpha operon ribosome binding site;product=Alpha operon ribosome binding site;Dbxref=RFAM:RF00140;inference=profile:Rfam:RF00140;Note=SO:0000139;regulatory_class=ribosome_binding_site contig_8 Pyrodigal gene 3121 3234 . - . ID=GCA008085315_00638_gene;locus_tag=GCA008085315_00638;gene=rpmJ contig_8 Pyrodigal CDS 3121 3234 . - 0 ID=GCA008085315_00638;Name=50S ribosomal protein L36;locus_tag=GCA008085315_00638;product=50S ribosomal protein L36;Dbxref=GO:0003735,GO:0005737,GO:0005840,GO:0006412,GO:1990904;gene=rpmJ;Parent=GCA008085315_00638_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0257,COG:J,KEGG:K02919,RefSeq:WP_005548767.1,SO:0001217,UniParc:UPI0000134032,UniRef:UniRef100_P57942,UniRef:UniRef50_P20278,UniRef:UniRef90_P46361 contig_8 Pyrodigal gene 3260 4585 . - . ID=GCA008085315_00639_gene;locus_tag=GCA008085315_00639;gene=secY contig_8 Pyrodigal CDS 3260 4585 . - 0 ID=GCA008085315_00639;Name=preprotein translocase subunit SecY;locus_tag=GCA008085315_00639;product=preprotein translocase subunit SecY;Dbxref=GO:0015031,GO:0016020,GO:0043952;gene=secY;Parent=GCA008085315_00639_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0201,COG:U,RefSeq:WP_014167558.1,SO:0001217,UniParc:UPI00022BFFD7,UniRef:UniRef100_UPI00022BFFD7,UniRef:UniRef50_P0AGA2,UniRef:UniRef90_Q9CL50 contig_8 Pyrodigal gene 4589 5023 . - . ID=GCA008085315_00640_gene;locus_tag=GCA008085315_00640;gene=rplO contig_8 Pyrodigal CDS 4589 5023 . - 0 ID=GCA008085315_00640;Name=50S ribosomal protein L15;locus_tag=GCA008085315_00640;product=50S ribosomal protein L15;Dbxref=GO:0003735,GO:0006412,GO:0015934,GO:0019843,GO:0022625;gene=rplO;Parent=GCA008085315_00640_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0200,COG:J,KEGG:K02876,RefSeq:WP_005548772.1,SO:0001217,UniParc:UPI0001B9F1B3,UniRef:UniRef100_UPI0001B9F1B3,UniRef:UniRef50_Q9KP03,UniRef:UniRef90_Q4QMA2 contig_8 Pyrodigal gene 5213 5713 . - . ID=GCA008085315_00641_gene;locus_tag=GCA008085315_00641;gene=rpsE contig_8 Pyrodigal CDS 5213 5713 . - 0 ID=GCA008085315_00641;Name=30S ribosomal protein S5;locus_tag=GCA008085315_00641;product=30S ribosomal protein S5;Dbxref=GO:0003735,GO:0005737,GO:0006412,GO:0015935,GO:0019843;gene=rpsE;Parent=GCA008085315_00641_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0098,COG:J,KEGG:K02988,RefSeq:WP_005548776.1,SO:0001217,UniParc:UPI0001B9F1B2,UniRef:UniRef100_UPI0001B9F1B2,UniRef:UniRef50_Q9HWF2,UniRef:UniRef90_Q9CL47 contig_8 Pyrodigal gene 5729 6082 . - . ID=GCA008085315_00642_gene;locus_tag=GCA008085315_00642;gene=rplR contig_8 Pyrodigal CDS 5729 6082 . - 0 ID=GCA008085315_00642;Name=50S ribosomal protein L18;locus_tag=GCA008085315_00642;product=50S ribosomal protein L18;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0008097,GO:0022625;gene=rplR;Parent=GCA008085315_00642_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0256,COG:J,RefSeq:WP_005548777.1,SO:0001217,UniParc:UPI00022AC35B,UniRef:UniRef100_UPI00022AC35B,UniRef:UniRef50_P44356,UniRef:UniRef90_P44356 contig_8 Pyrodigal gene 6096 6620 . - . ID=GCA008085315_00643_gene;locus_tag=GCA008085315_00643;gene=rplF contig_8 Pyrodigal CDS 6096 6620 . - 0 ID=GCA008085315_00643;Name=50S ribosomal protein L6;locus_tag=GCA008085315_00643;product=50S ribosomal protein L6;Dbxref=GO:0002181,GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:0022625;gene=rplF;Parent=GCA008085315_00643_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0097,COG:J,RefSeq:WP_148334022.1,SO:0001217,UniParc:UPI0011D863B1,UniRef:UniRef100_UPI0011D863B1,UniRef:UniRef50_P0AG55,UniRef:UniRef90_Q9CL45 contig_8 Pyrodigal gene 6636 7028 . - . ID=GCA008085315_00644_gene;locus_tag=GCA008085315_00644;gene=rpsH contig_8 Pyrodigal CDS 6636 7028 . - 0 ID=GCA008085315_00644;Name=30S ribosomal protein S8;locus_tag=GCA008085315_00644;product=30S ribosomal protein S8;Dbxref=GO:0003735,GO:0005737,GO:0005840,GO:0006412,GO:0019843,GO:1990904;gene=rpsH;Parent=GCA008085315_00644_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0096,COG:J,RefSeq:WP_005548780.1,SO:0001217,UniParc:UPI0001B9F1AF,UniRef:UniRef100_G4A6R3,UniRef:UniRef50_Q9CL44,UniRef:UniRef90_Q9CL44 contig_8 Pyrodigal gene 7065 7370 . - . ID=GCA008085315_00645_gene;locus_tag=GCA008085315_00645;gene=rpsN contig_8 Pyrodigal CDS 7065 7370 . - 0 ID=GCA008085315_00645;Name=30S ribosomal protein S14;locus_tag=GCA008085315_00645;product=30S ribosomal protein S14;Dbxref=GO:0003735,GO:0005737,GO:0005840,GO:0006412,GO:0015935,GO:0019843;gene=rpsN;Parent=GCA008085315_00645_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0199,COG:J,KEGG:K02954,RefSeq:WP_005548782.1,SO:0001217,UniParc:UPI0001E13BE1,UniRef:UniRef100_G4A6R2,UniRef:UniRef50_P0AG59,UniRef:UniRef90_P0AG59 contig_8 Pyrodigal gene 7383 7922 . - . ID=GCA008085315_00646_gene;locus_tag=GCA008085315_00646;gene=rplE contig_8 Pyrodigal CDS 7383 7922 . - 0 ID=GCA008085315_00646;Name=50S ribosomal protein L5;locus_tag=GCA008085315_00646;product=50S ribosomal protein L5;Dbxref=GO:0000049,GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:1990904;gene=rplE;Parent=GCA008085315_00646_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0094,COG:J,KEGG:K02931,RefSeq:WP_005548784.1,SO:0001217,UniParc:UPI0001AAE701,UniRef:UniRef100_A0A0K1N2D4,UniRef:UniRef50_Q83PY9,UniRef:UniRef90_Q83PY9 contig_8 Pyrodigal gene 7940 8251 . - . ID=GCA008085315_00647_gene;locus_tag=GCA008085315_00647;gene=rplX contig_8 Pyrodigal CDS 7940 8251 . - 0 ID=GCA008085315_00647;Name=50S ribosomal protein L24;locus_tag=GCA008085315_00647;product=50S ribosomal protein L24;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:0022625;gene=rplX;Parent=GCA008085315_00647_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0198,COG:J,RefSeq:WP_005548785.1,SO:0001217,UniParc:UPI0001B9F1AE,UniRef:UniRef100_E6KVE1,UniRef:UniRef50_P60624,UniRef:UniRef90_Q9CL41 contig_8 Pyrodigal gene 8262 8633 . - . ID=GCA008085315_00648_gene;locus_tag=GCA008085315_00648;gene=rplN contig_8 Pyrodigal CDS 8262 8633 . - 0 ID=GCA008085315_00648;Name=50S ribosomal protein L14;locus_tag=GCA008085315_00648;product=50S ribosomal protein L14;Dbxref=GO:0003735,GO:0006412,GO:0015934,GO:0022625,GO:0070180;gene=rplN;Parent=GCA008085315_00648_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0093,COG:J,KEGG:K02874,RefSeq:WP_005548786.1,SO:0001217,UniParc:UPI0000133BDA,UniRef:UniRef100_P66067,UniRef:UniRef50_P0ADY3,UniRef:UniRef90_P0ADY3 ##sequence-region contig_9 1 8370 contig_9 Bakta region 1 8370 . + . ID=contig_9;Name=contig_9 contig_9 tRNAscan-SE gene 43 119 . - . ID=GCA008085315_00649_gene;locus_tag=GCA008085315_00649;gene=trnR contig_9 tRNAscan-SE tRNA 43 119 . - . ID=GCA008085315_00649;Name=tRNA-Arg(tct);locus_tag=GCA008085315_00649;product=tRNA-Arg(tct);gene=trnR;anti_codon=tct;amino_acid=Arg;Parent=GCA008085315_00649_gene;inference=profile:tRNAscan:2.0;Note=SO:0001036 contig_9 tRNAscan-SE gene 153 229 . - . ID=GCA008085315_00650_gene;locus_tag=GCA008085315_00650;gene=trnP contig_9 tRNAscan-SE tRNA 153 229 . - . ID=GCA008085315_00650;Name=tRNA-Pro(tgg);locus_tag=GCA008085315_00650;product=tRNA-Pro(tgg);gene=trnP;anti_codon=tgg;amino_acid=Pro;Parent=GCA008085315_00650_gene;inference=profile:tRNAscan:2.0;Note=SO:0000268 contig_9 Pyrodigal gene 386 1243 . + . ID=GCA008085315_00651_gene;locus_tag=GCA008085315_00651;gene=folD contig_9 Pyrodigal CDS 386 1243 . + 0 ID=GCA008085315_00651;Name=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;locus_tag=GCA008085315_00651;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;Dbxref=GO:0004488;gene=folD;Parent=GCA008085315_00651_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0190,COG:H,RefSeq:WP_148334023.1,SO:0001217,UniParc:UPI0011D7BFC4,UniRef:UniRef100_UPI0011D7BFC4,UniRef:UniRef50_B0USU2,UniRef:UniRef90_A0A142G0H9;ec_number=3.5.4.9 contig_9 Pyrodigal gene 1332 2975 . - . ID=GCA008085315_00652_gene;locus_tag=GCA008085315_00652;gene=groL contig_9 Pyrodigal CDS 1332 2975 . - 0 ID=GCA008085315_00652;Name=chaperonin GroEL;locus_tag=GCA008085315_00652;product=chaperonin GroEL;Dbxref=GO:0005524,GO:0005737,GO:0016853,GO:0042026,GO:0051082,GO:0140662;gene=groL;Parent=GCA008085315_00652_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0459,COG:O,RefSeq:WP_148334024.1,SO:0001217,UniParc:UPI0011DBA0FE,UniRef:UniRef100_UPI0011DBA0FE,UniRef:UniRef50_P0A6F5,UniRef:UniRef90_P46398;ec_number=5.6.1.7 contig_9 Pyrodigal gene 3096 3386 . - . ID=GCA008085315_00653_gene;locus_tag=GCA008085315_00653;gene=groES contig_9 Pyrodigal CDS 3096 3386 . - 0 ID=GCA008085315_00653;Name=Co-chaperonin GroES;locus_tag=GCA008085315_00653;product=Co-chaperonin GroES;Dbxref=GO:0005524,GO:0005737,GO:0044183,GO:0046872,GO:0051082,GO:0051085,GO:0051087;gene=groES;Parent=GCA008085315_00653_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0234,COG:O,KEGG:K04078,RefSeq:WP_005544374.1,SO:0001217,UniParc:UPI0001B9F1CE,UniRef:UniRef100_A0A142G0I1,UniRef:UniRef50_P43734,UniRef:UniRef90_P46399 contig_9 Pyrodigal gene 3473 3955 . - . ID=GCA008085315_00654_gene;locus_tag=GCA008085315_00654;gene=fxsA contig_9 Pyrodigal CDS 3473 3955 . - 0 ID=GCA008085315_00654;Name=Exclusion suppressor FxsA;locus_tag=GCA008085315_00654;product=Exclusion suppressor FxsA;gene=fxsA;Parent=GCA008085315_00654_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3030,COG:R,KEGG:K07113,RefSeq:WP_005547879.1,SO:0001217,UniParc:UPI0001B9F1CD,UniRef:UniRef100_UPI0001B9F1CD,UniRef:UniRef50_Q9CLU8,UniRef:UniRef90_A0A5D0EJ98 contig_9 Pyrodigal gene 4185 5603 . + . ID=GCA008085315_00655_gene;locus_tag=GCA008085315_00655;gene=aspA contig_9 Pyrodigal CDS 4185 5603 . + 0 ID=GCA008085315_00655;Name=aspartate ammonia-lyase;locus_tag=GCA008085315_00655;product=aspartate ammonia-lyase;Dbxref=GO:0006520,GO:0008797;gene=aspA;Parent=GCA008085315_00655_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K01744,RefSeq:WP_148321113.1,SO:0001217,UniParc:UPI0011D36F50,UniRef:UniRef100_UPI0011D36F50,UniRef:UniRef50_P56149,UniRef:UniRef90_UPI0011D36F50;ec_number=4.3.1.1 contig_9 Pyrodigal gene 5785 6822 . + . ID=GCA008085315_00656_gene;locus_tag=GCA008085315_00656;gene=rfaF contig_9 Pyrodigal CDS 5785 6822 . + 0 ID=GCA008085315_00656;Name=Glycosyltransferase family 9 protein;locus_tag=GCA008085315_00656;product=Glycosyltransferase family 9 protein;gene=rfaF;Parent=GCA008085315_00656_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0859,COG:M,RefSeq:WP_005547882.1,SO:0001217,UniParc:UPI0001B9F1CB,UniRef:UniRef100_UPI0001B9F1CB,UniRef:UniRef50_P44011,UniRef:UniRef90_A0A142G0I4 contig_9 Pyrodigal gene 7729 8304 . - . ID=GCA008085315_00657_gene;locus_tag=GCA008085315_00657;gene=yigB contig_9 Pyrodigal CDS 7729 8304 . - 0 ID=GCA008085315_00657;Name=HAD family hydrolase;locus_tag=GCA008085315_00657;product=HAD family hydrolase;gene=yigB;Parent=GCA008085315_00657_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1011,COG:H,RefSeq:WP_230583187.1,SO:0001217,UniParc:UPI000AC3745D,UniRef:UniRef100_UPI000AC3745D,UniRef:UniRef50_A0A336N3K4,UniRef:UniRef90_A0A142G003 ##sequence-region contig_10 1 7459 contig_10 Bakta region 1 7459 . + . ID=contig_10;Name=contig_10 contig_10 Pyrodigal gene 127 609 . - . ID=GCA008085315_00658_gene;locus_tag=GCA008085315_00658 contig_10 Pyrodigal CDS 127 609 . - 0 ID=GCA008085315_00658;Name=hypothetical protein;locus_tag=GCA008085315_00658;product=hypothetical protein;Parent=GCA008085315_00658_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148321122.1,SO:0001217,UniParc:UPI0011D390D1,UniRef:UniRef100_UPI0011D390D1,UniRef:UniRef50_F0ERZ1,UniRef:UniRef90_F0ERZ1 contig_10 Pyrodigal gene 638 889 . - . ID=GCA008085315_00659_gene;locus_tag=GCA008085315_00659 contig_10 Pyrodigal CDS 638 889 . - 0 ID=GCA008085315_00659;Name=hypothetical protein;locus_tag=GCA008085315_00659;product=hypothetical protein;Parent=GCA008085315_00659_gene;inference=ab initio prediction:Pyrodigal:3.5 contig_10 Pyrodigal gene 939 1157 . + . ID=GCA008085315_00660_gene;locus_tag=GCA008085315_00660 contig_10 Pyrodigal CDS 939 1157 . + 0 ID=GCA008085315_00660;Name=hypothetical protein;locus_tag=GCA008085315_00660;product=hypothetical protein;Parent=GCA008085315_00660_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148321121.1,SO:0001217,UniParc:UPI0011D8C44B,UniRef:UniRef100_UPI0011D8C44B,UniRef:UniRef50_UPI0011D8C44B,UniRef:UniRef90_UPI0011D8C44B contig_10 Pyrodigal gene 1237 2703 . - . ID=GCA008085315_00661_gene;locus_tag=GCA008085315_00661 contig_10 Pyrodigal CDS 1237 2703 . - 0 ID=GCA008085315_00661;Name=Restriction endonuclease;locus_tag=GCA008085315_00661;product=Restriction endonuclease;Parent=GCA008085315_00661_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148321120.1,SO:0001217,UniParc:UPI0011D6F790,UniRef:UniRef100_UPI0011D6F790,UniRef:UniRef50_A0AAD1BMQ2,UniRef:UniRef90_UPI0011D6A139 contig_10 Pyrodigal gene 2705 3766 . - . ID=GCA008085315_00662_gene;locus_tag=GCA008085315_00662 contig_10 Pyrodigal CDS 2705 3766 . - 0 ID=GCA008085315_00662;Name=DNA adenine methylase;locus_tag=GCA008085315_00662;product=DNA adenine methylase;Parent=GCA008085315_00662_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07318,RefSeq:WP_148321119.1,SO:0001217,UniParc:UPI0011DAB668,UniRef:UniRef100_UPI0011DAB668,UniRef:UniRef50_S5ZYK4,UniRef:UniRef90_UPI0011D9C5D8;ec_number=2.1.1.72 contig_10 Pyrodigal gene 3777 4607 . - . ID=GCA008085315_00663_gene;locus_tag=GCA008085315_00663 contig_10 Pyrodigal CDS 3777 4607 . - 0 ID=GCA008085315_00663;Name=Dam family site-specific DNA-(adenine-N6)-methyltransferase;locus_tag=GCA008085315_00663;product=Dam family site-specific DNA-(adenine-N6)-methyltransferase;Parent=GCA008085315_00663_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K06223,SO:0001217,UniRef:UniRef50_E1KU95,UniRef:UniRef90_UPI0011D84D60;ec_number=2.1.1.72 contig_10 Pyrodigal gene 5053 5394 . - . ID=GCA008085315_00664_gene;locus_tag=GCA008085315_00664 contig_10 Pyrodigal CDS 5053 5394 . - 0 ID=GCA008085315_00664;Name=Transcriptional regulator;locus_tag=GCA008085315_00664;product=Transcriptional regulator;Parent=GCA008085315_00664_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148321117.1,SO:0001217,UniParc:UPI0011D6A461,UniRef:UniRef100_UPI0011D6A461,UniRef:UniRef50_A3N0W1,UniRef:UniRef90_A0A1B8PGA6 contig_10 Pyrodigal gene 5504 6538 . + . ID=GCA008085315_00665_gene;locus_tag=GCA008085315_00665 contig_10 Pyrodigal CDS 5504 6538 . + 0 ID=GCA008085315_00665;Name=ISXO2-like transposase domain-containing protein;locus_tag=GCA008085315_00665;product=ISXO2-like transposase domain-containing protein;Parent=GCA008085315_00665_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148321116.1,SO:0001217,UniParc:UPI0011D5F902,UniRef:UniRef100_UPI0011D5F902,UniRef:UniRef50_C9PRT0,UniRef:UniRef90_H1LQ76 contig_10 Pyrodigal gene 6538 6975 . + . ID=GCA008085315_00666_gene;locus_tag=GCA008085315_00666 contig_10 Pyrodigal CDS 6538 6975 . + 0 ID=GCA008085315_00666;Name=DNA repair ATPase;locus_tag=GCA008085315_00666;product=DNA repair ATPase;Parent=GCA008085315_00666_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148321115.1,SO:0001217,UniParc:UPI0011D4EBAF,UniRef:UniRef100_UPI0011D4EBAF,UniRef:UniRef50_E6KXE6,UniRef:UniRef90_E6KXE6 contig_10 Pyrodigal gene 6996 7370 . - . ID=GCA008085315_00667_gene;locus_tag=GCA008085315_00667 contig_10 Pyrodigal CDS 6996 7370 . - 0 ID=GCA008085315_00667;Name=HTH HARE-type domain-containing protein;locus_tag=GCA008085315_00667;product=HTH HARE-type domain-containing protein;Parent=GCA008085315_00667_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148321114.1,SO:0001217,UniParc:UPI0011D4321E,UniRef:UniRef100_UPI0011D4321E,UniRef:UniRef50_A0A502JBS5,UniRef:UniRef90_E8KFW5 ##sequence-region contig_11 1 6998 contig_11 Bakta region 1 6998 . + . ID=contig_11;Name=contig_11 contig_11 Pyrodigal gene 183 695 . - . ID=GCA008085315_00668_gene;locus_tag=GCA008085315_00668;gene=hemG contig_11 Pyrodigal CDS 183 695 . - 0 ID=GCA008085315_00668;Name=menaquinone-dependent protoporphyrinogen IX dehydrogenase;locus_tag=GCA008085315_00668;product=menaquinone-dependent protoporphyrinogen IX dehydrogenase;gene=hemG;Parent=GCA008085315_00668_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4635,COG:H,KEGG:K00230,RefSeq:WP_005545491.1,SO:0001217,UniParc:UPI0001B9F1C1,UniRef:UniRef100_UPI0001B9F1C1,UniRef:UniRef50_P0ACB4,UniRef:UniRef90_A0A142FZA0;ec_number=1.3.5.3 contig_11 Pyrodigal gene 695 2158 . - . ID=GCA008085315_00669_gene;locus_tag=GCA008085315_00669;gene=trkG contig_11 Pyrodigal CDS 695 2158 . - 0 ID=GCA008085315_00669;Name=Trk system potassium uptake protein;locus_tag=GCA008085315_00669;product=Trk system potassium uptake protein;gene=trkG;Parent=GCA008085315_00669_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0168,COG:P,RefSeq:WP_005588097.1,SO:0001217,UniParc:UPI0001B9F1C0,UniRef:UniRef100_UPI0001B9F1C0,UniRef:UniRef50_P44843,UniRef:UniRef90_E6KZX5 contig_11 Pyrodigal gene 2782 3027 . + . ID=GCA008085315_00670_gene;locus_tag=GCA008085315_00670;gene=tusA contig_11 Pyrodigal CDS 2782 3027 . + 0 ID=GCA008085315_00670;Name=sulfurtransferase TusA;locus_tag=GCA008085315_00670;product=sulfurtransferase TusA;Dbxref=GO:0002143,GO:0097163;gene=tusA;Parent=GCA008085315_00670_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0425,COG:JHO,RefSeq:WP_005575711.1,SO:0001217,UniParc:UPI0001B9F1BC,UniRef:UniRef100_UPI0001B9F1BC,UniRef:UniRef50_A8AR31,UniRef:UniRef90_E6KZX7;ec_number=2.8.1.- contig_11 Pyrodigal gene 3347 4618 . + . ID=GCA008085315_00671_gene;locus_tag=GCA008085315_00671;gene=nadR contig_11 Pyrodigal CDS 3347 4618 . + 0 ID=GCA008085315_00671;Name=multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR;locus_tag=GCA008085315_00671;product=multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR;Dbxref=GO:0000309,GO:0003677,GO:0009058,GO:0050262;gene=nadR;Parent=GCA008085315_00671_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3172,COG:H,KEGG:K06211,RefSeq:WP_005545495.1,SO:0001217,UniParc:UPI0001890B49,UniRef:UniRef100_UPI0001890B49,UniRef:UniRef50_P44308,UniRef:UniRef90_A0A142FZA5;ec_number=2.7.7.1 contig_11 Pyrodigal gene 4634 5317 . + . ID=GCA008085315_00672_gene;locus_tag=GCA008085315_00672 contig_11 Pyrodigal CDS 4634 5317 . + 0 ID=GCA008085315_00672;Name=Calcineurin-like phosphoesterase domain-containing protein;locus_tag=GCA008085315_00672;product=Calcineurin-like phosphoesterase domain-containing protein;Parent=GCA008085315_00672_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2129,COG:R,RefSeq:WP_005545496.1,SO:0001217,UniParc:UPI0001B9F1BB,UniRef:UniRef100_UPI0001B9F1BB,UniRef:UniRef50_P44050,UniRef:UniRef90_A0A142FZA6 contig_11 Pyrodigal gene 5447 6676 . + . ID=GCA008085315_00673_gene;locus_tag=GCA008085315_00673;gene=sdaC contig_11 Pyrodigal CDS 5447 6676 . + 0 ID=GCA008085315_00673;Name=Aromatic amino acid permease;locus_tag=GCA008085315_00673;product=Aromatic amino acid permease;gene=sdaC;Parent=GCA008085315_00673_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0814,COG:E,KEGG:K03834,RefSeq:WP_005545497.1,SO:0001217,UniParc:UPI0001B9F1BA,UniRef:UniRef100_UPI0001B9F1BA,UniRef:UniRef50_P44747,UniRef:UniRef90_G4A9L7 ##sequence-region contig_12 1 284584 contig_12 Bakta region 1 284584 . + . ID=contig_12;Name=contig_12 contig_12 Pyrodigal gene 64 882 . - . ID=GCA008085315_00674_gene;locus_tag=GCA008085315_00674;gene=sapF contig_12 Pyrodigal CDS 64 882 . - 0 ID=GCA008085315_00674;Name=ATP-binding cassette domain-containing protein;locus_tag=GCA008085315_00674;product=ATP-binding cassette domain-containing protein;gene=sapF;Parent=GCA008085315_00674_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4167,COG:V,RefSeq:WP_005545405.1,SO:0001217,UniParc:UPI0001B9F6BC,UniRef:UniRef100_UPI0001B9F6BC,UniRef:UniRef50_P45289,UniRef:UniRef90_UPI0002AB9C7C contig_12 Pyrodigal gene 886 1938 . - . ID=GCA008085315_00675_gene;locus_tag=GCA008085315_00675;gene=sapD contig_12 Pyrodigal CDS 886 1938 . - 0 ID=GCA008085315_00675;Name=Glutathione import ATP-binding protein GsiA;locus_tag=GCA008085315_00675;product=Glutathione import ATP-binding protein GsiA;gene=sapD;Parent=GCA008085315_00675_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4170,COG:V,RefSeq:WP_005545403.1,SO:0001217,UniParc:UPI0001B9F6BD,UniRef:UniRef100_UPI0001B9F6BD,UniRef:UniRef50_P45288,UniRef:UniRef90_A0A0K1N427 contig_12 Pyrodigal gene 1946 2833 . - . ID=GCA008085315_00676_gene;locus_tag=GCA008085315_00676;gene=sapC contig_12 Pyrodigal CDS 1946 2833 . - 0 ID=GCA008085315_00676;Name=ABC transporter permease subunit;locus_tag=GCA008085315_00676;product=ABC transporter permease subunit;gene=sapC;Parent=GCA008085315_00676_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4171,COG:V,KEGG:K19228,RefSeq:WP_005542341.1,SO:0001217,UniParc:UPI0001B9F6BE,UniRef:UniRef100_A0A142G2M6,UniRef:UniRef50_P45287,UniRef:UniRef90_A0A142G2M6 contig_12 Pyrodigal gene 2823 3788 . - . ID=GCA008085315_00677_gene;locus_tag=GCA008085315_00677;gene=sapB contig_12 Pyrodigal CDS 2823 3788 . - 0 ID=GCA008085315_00677;Name=ABC transporter permease subunit;locus_tag=GCA008085315_00677;product=ABC transporter permease subunit;gene=sapB;Parent=GCA008085315_00677_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4168,COG:V,KEGG:K19227,RefSeq:WP_005542342.1,SO:0001217,UniParc:UPI0001B9F6BF,UniRef:UniRef100_A0A142G2M7,UniRef:UniRef50_P45286,UniRef:UniRef90_A0A142G2M7 contig_12 Pyrodigal gene 3788 5479 . - . ID=GCA008085315_00678_gene;locus_tag=GCA008085315_00678;gene=ddpA contig_12 Pyrodigal CDS 3788 5479 . - 0 ID=GCA008085315_00678;Name=ABC transporter substrate-binding protein;locus_tag=GCA008085315_00678;product=ABC transporter substrate-binding protein;gene=ddpA;Parent=GCA008085315_00678_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0747,COG:E,KEGG:K19226,RefSeq:WP_005545401.1,SO:0001217,UniParc:UPI00022C00BE,UniRef:UniRef100_UPI00022C00BE,UniRef:UniRef50_P45285,UniRef:UniRef90_A0A5D0EMA8 contig_12 Pyrodigal gene 5684 7099 . + . ID=GCA008085315_00679_gene;locus_tag=GCA008085315_00679;gene=ycjX contig_12 Pyrodigal CDS 5684 7099 . + 0 ID=GCA008085315_00679;Name=YcjX family protein;locus_tag=GCA008085315_00679;product=YcjX family protein;gene=ycjX;Parent=GCA008085315_00679_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3106,COG:T,KEGG:K06918,SO:0001217,UniRef:UniRef50_P44280,UniRef:UniRef90_A0A142G2M9 contig_12 Pyrodigal gene 7112 8191 . + . ID=GCA008085315_00680_gene;locus_tag=GCA008085315_00680;gene=ycjF contig_12 Pyrodigal CDS 7112 8191 . + 0 ID=GCA008085315_00680;Name=UPF0283 membrane protein ACT75_10480;locus_tag=GCA008085315_00680;product=UPF0283 membrane protein ACT75_10480;gene=ycjF;Parent=GCA008085315_00680_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3768,COG:S,RefSeq:WP_005545396.1,SO:0001217,UniParc:UPI0001B9F6C2,UniRef:UniRef100_UPI0001B9F6C2,UniRef:UniRef50_P43931,UniRef:UniRef90_A0A142G2N0 contig_12 Pyrodigal gene 8275 9234 . + . ID=GCA008085315_00681_gene;locus_tag=GCA008085315_00681;gene=tyrR contig_12 Pyrodigal CDS 8275 9234 . + 0 ID=GCA008085315_00681;Name=AAA domain-containing protein;locus_tag=GCA008085315_00681;product=AAA domain-containing protein;gene=tyrR;Parent=GCA008085315_00681_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3283,COG:KE,RefSeq:WP_005545394.1,SO:0001217,UniParc:UPI0001B9F6C3,UniRef:UniRef100_UPI0001B9F6C3,UniRef:UniRef50_P44694,UniRef:UniRef90_A0A142G2N1 contig_12 Pyrodigal gene 9231 9365 . - . ID=GCA008085315_00682_gene;locus_tag=GCA008085315_00682 contig_12 Pyrodigal CDS 9231 9365 . - 0 ID=GCA008085315_00682;Name=hypothetical protein;locus_tag=GCA008085315_00682;product=hypothetical protein;Parent=GCA008085315_00682_gene;inference=ab initio prediction:Pyrodigal:3.5 contig_12 Pyrodigal gene 9614 9910 . - . ID=GCA008085315_00683_gene;locus_tag=GCA008085315_00683;gene=hfq contig_12 Pyrodigal CDS 9614 9910 . - 0 ID=GCA008085315_00683;Name=RNA chaperone Hfq;locus_tag=GCA008085315_00683;product=RNA chaperone Hfq;Dbxref=GO:0003723,GO:0006355;gene=hfq;Parent=GCA008085315_00683_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1923,COG:T,RefSeq:WP_005542348.1,SO:0001217,UniParc:UPI0001B9F6C6,UniRef:UniRef100_A0A142G2N2,UniRef:UniRef50_Q5NH41,UniRef:UniRef90_A0A142G2N2 contig_12 Pyrodigal gene 10029 10973 . - . ID=GCA008085315_00684_gene;locus_tag=GCA008085315_00684;gene=miaA contig_12 Pyrodigal CDS 10029 10973 . - 0 ID=GCA008085315_00684;Name=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;locus_tag=GCA008085315_00684;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;Dbxref=GO:0005737,GO:0006400,GO:0052381;gene=miaA;Parent=GCA008085315_00684_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0324,COG:J,RefSeq:WP_005545388.1,SO:0001217,UniParc:UPI0001B9F6C7,UniRef:UniRef100_UPI0001B9F6C7,UniRef:UniRef50_Q9HUL9,UniRef:UniRef90_A0A142G2N3;ec_number=2.5.1.75 contig_12 Pyrodigal gene 10988 12838 . - . ID=GCA008085315_00685_gene;locus_tag=GCA008085315_00685;gene=mutL contig_12 Pyrodigal CDS 10988 12838 . - 0 ID=GCA008085315_00685;Name=DNA mismatch repair endonuclease MutL;locus_tag=GCA008085315_00685;product=DNA mismatch repair endonuclease MutL;Dbxref=GO:0005524,GO:0006298,GO:0016887,GO:0030983,GO:0032300;gene=mutL;Parent=GCA008085315_00685_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0323,COG:L,RefSeq:WP_148333952.1,SO:0001217,UniParc:UPI0011D8CEC1,UniRef:UniRef100_UPI0011D8CEC1,UniRef:UniRef50_A5UB71,UniRef:UniRef90_A0A5D0EIY1 contig_12 Pyrodigal gene 12838 14325 . - . ID=GCA008085315_00686_gene;locus_tag=GCA008085315_00686;gene=lysM contig_12 Pyrodigal CDS 12838 14325 . - 0 ID=GCA008085315_00686;Name=N-acetylmuramoyl-L-alanine amidase;locus_tag=GCA008085315_00686;product=N-acetylmuramoyl-L-alanine amidase;gene=lysM;Parent=GCA008085315_00686_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1388,COG:M,KEGG:K01448,RefSeq:WP_005588703.1,SO:0001217,UniParc:UPI0001B9F6C9,UniRef:UniRef100_UPI0001B9F6C9,UniRef:UniRef50_P44493,UniRef:UniRef90_G4A686;ec_number=3.5.1.28 contig_12 Pyrodigal gene 14322 14816 . - . ID=GCA008085315_00687_gene;locus_tag=GCA008085315_00687;gene=tsaE contig_12 Pyrodigal CDS 14322 14816 . - 0 ID=GCA008085315_00687;Name=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;locus_tag=GCA008085315_00687;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;Dbxref=GO:0002949;gene=tsaE;Parent=GCA008085315_00687_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0802,COG:J,RefSeq:WP_005545380.1,SO:0001217,UniParc:UPI00022AD156,UniRef:UniRef100_UPI00022AD156,UniRef:UniRef50_P44492,UniRef:UniRef90_A0A142G2N6 contig_12 Pyrodigal gene 14972 16765 . - . ID=GCA008085315_00688_gene;locus_tag=GCA008085315_00688;gene=stt3 contig_12 Pyrodigal CDS 14972 16765 . - 0 ID=GCA008085315_00688;Name=Asparagine N-glycosylation enzyme%2C membrane subunit Stt3;locus_tag=GCA008085315_00688;product=Asparagine N-glycosylation enzyme%2C membrane subunit Stt3;gene=stt3;Parent=GCA008085315_00688_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1287,COG:O,RefSeq:WP_148321265.1,SO:0001217,UniParc:UPI0011D88F7A,UniRef:UniRef100_UPI0011D88F7A,UniRef:UniRef50_A0A5D0EMA9,UniRef:UniRef90_A0A5D0EMA9 contig_12 Pyrodigal gene 17153 18073 . - . ID=GCA008085315_00689_gene;locus_tag=GCA008085315_00689;gene=wcaA contig_12 Pyrodigal CDS 17153 18073 . - 0 ID=GCA008085315_00689;Name=Glycosyltransferase;locus_tag=GCA008085315_00689;product=Glycosyltransferase;gene=wcaA;Parent=GCA008085315_00689_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0463,COG:M,KEGG:K23684,RefSeq:WP_053330113.1,SO:0001217,UniParc:UPI0006A6B0C7,UniRef:UniRef100_UPI0006A6B0C7,UniRef:UniRef50_C9PRC4,UniRef:UniRef90_A0A5D0ELJ2;ec_number=2.4.1.- contig_12 Pyrodigal gene 18085 19593 . - . ID=GCA008085315_00690_gene;locus_tag=GCA008085315_00690;gene=speE contig_12 Pyrodigal CDS 18085 19593 . - 0 ID=GCA008085315_00690;Name=Spermidine synthase;locus_tag=GCA008085315_00690;product=Spermidine synthase;gene=speE;Parent=GCA008085315_00690_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0421,COG:E,RefSeq:WP_005545374.1,SO:0001217,UniParc:UPI00022C0032,UniRef:UniRef100_UPI00022C0032,UniRef:UniRef50_A0A448TUM3,UniRef:UniRef90_A0A142G2N9 contig_12 Pyrodigal gene 19580 20197 . - . ID=GCA008085315_00691_gene;locus_tag=GCA008085315_00691 contig_12 Pyrodigal CDS 19580 20197 . - 0 ID=GCA008085315_00691;Name=Integral membrane protein;locus_tag=GCA008085315_00691;product=Integral membrane protein;Parent=GCA008085315_00691_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4262,COG:R,RefSeq:WP_005545372.1,SO:0001217,UniParc:UPI0001B9F6CF,UniRef:UniRef100_UPI0001B9F6CF,UniRef:UniRef50_N8XTA0,UniRef:UniRef90_A0A142G2P0 contig_12 Pyrodigal gene 20226 21851 . - . ID=GCA008085315_00692_gene;locus_tag=GCA008085315_00692;gene=opgE contig_12 Pyrodigal CDS 20226 21851 . - 0 ID=GCA008085315_00692;Name=Sulfatase N-terminal domain-containing protein;locus_tag=GCA008085315_00692;product=Sulfatase N-terminal domain-containing protein;gene=opgE;Parent=GCA008085315_00692_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2194,COG:M,RefSeq:WP_005565827.1,SO:0001217,UniParc:UPI00022AE1E7,UniRef:UniRef100_UPI00022AE1E7,UniRef:UniRef50_Q7VNV7,UniRef:UniRef90_A0AAC8Y0A7 contig_12 tRNAscan-SE gene 22085 22160 . - . ID=GCA008085315_00693_gene;locus_tag=GCA008085315_00693;gene=trnG contig_12 tRNAscan-SE tRNA 22085 22160 . - . ID=GCA008085315_00693;Name=tRNA-Gly(gcc);locus_tag=GCA008085315_00693;product=tRNA-Gly(gcc);gene=trnG;anti_codon=gcc;amino_acid=Gly;Parent=GCA008085315_00693_gene;inference=profile:tRNAscan:2.0;Note=SO:0000260 contig_12 Pyrodigal gene 22259 22807 . - . ID=GCA008085315_00694_gene;locus_tag=GCA008085315_00694;gene=orn contig_12 Pyrodigal CDS 22259 22807 . - 0 ID=GCA008085315_00694;Name=oligoribonuclease;locus_tag=GCA008085315_00694;product=oligoribonuclease;Dbxref=GO:0000175,GO:0003676;gene=orn;Parent=GCA008085315_00694_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:A,COG:COG1949,KEGG:K13288,RefSeq:WP_005545363.1,SO:0001217,UniParc:UPI0001B9F72E,UniRef:UniRef100_UPI0001B9F72E,UniRef:UniRef50_Q88DC5,UniRef:UniRef90_A0A142G2R4;ec_number=3.1.-.- contig_12 Pyrodigal gene 22878 23918 . + . ID=GCA008085315_00695_gene;locus_tag=GCA008085315_00695;gene=rsgA contig_12 Pyrodigal CDS 22878 23918 . + 0 ID=GCA008085315_00695;Name=small ribosomal subunit biogenesis GTPase RsgA;locus_tag=GCA008085315_00695;product=small ribosomal subunit biogenesis GTPase RsgA;Dbxref=GO:0003924,GO:0005525;gene=rsgA;Parent=GCA008085315_00695_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1162,COG:J,KEGG:K06949,RefSeq:WP_005545361.1,SO:0001217,UniParc:UPI0001B9F72F,UniRef:UniRef100_UPI0001B9F72F,UniRef:UniRef50_P39286,UniRef:UniRef90_A0A142G2R5;ec_number=3.6.1.- contig_12 Pyrodigal gene 24139 24396 . + . ID=GCA008085315_00696_gene;locus_tag=GCA008085315_00696;gene=ptsH contig_12 Pyrodigal CDS 24139 24396 . + 0 ID=GCA008085315_00696;Name=phosphocarrier protein Hpr;locus_tag=GCA008085315_00696;product=phosphocarrier protein Hpr;gene=ptsH;Parent=GCA008085315_00696_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1925,COG:TG,RefSeq:WP_005540961.1,SO:0001217,UniParc:UPI0001B9F730,UniRef:UniRef100_A0A5D0EK56,UniRef:UniRef50_P0AA04,UniRef:UniRef90_A0A0F5EZQ4 contig_12 Pyrodigal gene 24510 26237 . + . ID=GCA008085315_00697_gene;locus_tag=GCA008085315_00697;gene=ptsI contig_12 Pyrodigal CDS 24510 26237 . + 0 ID=GCA008085315_00697;Name=phosphoenolpyruvate-protein phosphotransferase PtsI;locus_tag=GCA008085315_00697;product=phosphoenolpyruvate-protein phosphotransferase PtsI;gene=ptsI;Parent=GCA008085315_00697_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1080,COG:G,RefSeq:WP_005545359.1,SO:0001217,UniParc:UPI0001B9F731,UniRef:UniRef100_UPI0001B9F731,UniRef:UniRef50_P08839,UniRef:UniRef90_A0A5D0EMB2;ec_number=2.7.3.9 contig_12 Pyrodigal gene 26298 26798 . + . ID=GCA008085315_00698_gene;locus_tag=GCA008085315_00698;gene=crr contig_12 Pyrodigal CDS 26298 26798 . + 0 ID=GCA008085315_00698;Name=PTS glucose transporter subunit IIA;locus_tag=GCA008085315_00698;product=PTS glucose transporter subunit IIA;Dbxref=GO:0009401;gene=crr;Parent=GCA008085315_00698_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2190,COG:G,RefSeq:WP_005540965.1,SO:0001217,UniParc:UPI0001B9F732,UniRef:UniRef100_A0A142G2R8,UniRef:UniRef50_P45338,UniRef:UniRef90_E6KX00;ec_number=2.7.1.199 contig_12 Pyrodigal gene 26924 28963 . - . ID=GCA008085315_00699_gene;locus_tag=GCA008085315_00699;gene=prlC contig_12 Pyrodigal CDS 26924 28963 . - 0 ID=GCA008085315_00699;Name=oligopeptidase A;locus_tag=GCA008085315_00699;product=oligopeptidase A;Dbxref=GO:0004222,GO:0006508;gene=prlC;Parent=GCA008085315_00699_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0339,COG:O,KEGG:K01414,RefSeq:WP_005568192.1,SO:0001217,UniParc:UPI0001B9F733,UniRef:UniRef100_UPI0001B9F733,UniRef:UniRef50_A0A7Y4RUI0,UniRef:UniRef90_E6KX01;ec_number=3.4.24.70 contig_12 Pyrodigal gene 29105 29470 . + . ID=GCA008085315_00700_gene;locus_tag=GCA008085315_00700;gene=ybaN contig_12 Pyrodigal CDS 29105 29470 . + 0 ID=GCA008085315_00700;Name=Inner membrane protein;locus_tag=GCA008085315_00700;product=Inner membrane protein;gene=ybaN;Parent=GCA008085315_00700_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2832,COG:S,RefSeq:WP_005540969.1,SO:0001217,UniParc:UPI0001B9F734,UniRef:UniRef100_A0A142G2S0,UniRef:UniRef50_A0A336N9Y9,UniRef:UniRef90_A0A142G2S0 contig_12 Pyrodigal gene 29526 31064 . + . ID=GCA008085315_00701_gene;locus_tag=GCA008085315_00701;gene=oppA contig_12 Pyrodigal CDS 29526 31064 . + 0 ID=GCA008085315_00701;Name=Periplasmic oligopeptide-binding protein;locus_tag=GCA008085315_00701;product=Periplasmic oligopeptide-binding protein;gene=oppA;Parent=GCA008085315_00701_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4166,COG:E,RefSeq:WP_148320697.1,SO:0001217,UniParc:UPI0011D4EBEC,UniRef:UniRef100_UPI0011D4EBEC,UniRef:UniRef50_A0A263HBD3,UniRef:UniRef90_G4A6A0 contig_12 Pyrodigal gene 31339 31926 . - . ID=GCA008085315_00702_gene;locus_tag=GCA008085315_00702;gene=ilvE contig_12 Pyrodigal CDS 31339 31926 . - 0 ID=GCA008085315_00702;Name=Aminotransferase class IV;locus_tag=GCA008085315_00702;product=Aminotransferase class IV;gene=ilvE;Parent=GCA008085315_00702_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0115,COG:EH,RefSeq:WP_005545351.1,SO:0001217,UniParc:UPI0001B9F736,UniRef:UniRef100_UPI0001B9F736,UniRef:UniRef50_P44118,UniRef:UniRef90_A0AAC9F9M8 contig_12 Pyrodigal gene 31929 32903 . - . ID=GCA008085315_00703_gene;locus_tag=GCA008085315_00703;gene=trpE contig_12 Pyrodigal CDS 31929 32903 . - 0 ID=GCA008085315_00703;Name=aminodeoxychorismate synthase component I;locus_tag=GCA008085315_00703;product=aminodeoxychorismate synthase component I;Dbxref=GO:0009058;gene=trpE;Parent=GCA008085315_00703_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0147,COG:EH,RefSeq:WP_005545348.1,SO:0001217,UniParc:UPI0001B9F737,UniRef:UniRef100_UPI0001B9F737,UniRef:UniRef50_Q57527,UniRef:UniRef90_A0A5D0EM38;ec_number=2.6.1.85 contig_12 Pyrodigal gene 33005 33571 . + . ID=GCA008085315_00704_gene;locus_tag=GCA008085315_00704;gene=pabA contig_12 Pyrodigal CDS 33005 33571 . + 0 ID=GCA008085315_00704;Name=anthranilate synthase component II;locus_tag=GCA008085315_00704;product=anthranilate synthase component II;gene=pabA;Parent=GCA008085315_00704_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0512,COG:EH,RefSeq:WP_005545346.1,SO:0001217,UniParc:UPI0001B9F738,UniRef:UniRef100_UPI0001B9F738,UniRef:UniRef50_P44339,UniRef:UniRef90_A0A5D0EJB5 contig_12 Pyrodigal gene 33727 34671 . + . ID=GCA008085315_00705_gene;locus_tag=GCA008085315_00705;gene=ldhA contig_12 Pyrodigal CDS 33727 34671 . + 0 ID=GCA008085315_00705;Name=2-hydroxyacid dehydrogenase;locus_tag=GCA008085315_00705;product=2-hydroxyacid dehydrogenase;gene=ldhA;Parent=GCA008085315_00705_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CHR,COG:COG1052,RefSeq:WP_148320699.1,SO:0001217,UniParc:UPI0011D9156E,UniRef:UniRef100_UPI0011D9156E,UniRef:UniRef50_P45250,UniRef:UniRef90_E6KX91 contig_12 Pyrodigal gene 34835 34951 . + . ID=GCA008085315_00706_gene;locus_tag=GCA008085315_00706 contig_12 Pyrodigal CDS 34835 34951 . + 0 ID=GCA008085315_00706;Name=hypothetical protein;locus_tag=GCA008085315_00706;product=hypothetical protein;Parent=GCA008085315_00706_gene;inference=ab initio prediction:Pyrodigal:3.5 contig_12 Pyrodigal gene 35214 36398 . + . ID=GCA008085315_00707_gene;locus_tag=GCA008085315_00707;gene=lolE contig_12 Pyrodigal CDS 35214 36398 . + 0 ID=GCA008085315_00707;Name=lipoprotein-releasing ABC transporter permease subunit;locus_tag=GCA008085315_00707;product=lipoprotein-releasing ABC transporter permease subunit;Dbxref=GO:0005886,GO:0042953;gene=lolE;Parent=GCA008085315_00707_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4591,COG:M,RefSeq:WP_005545341.1,SO:0001217,UniParc:UPI0001B9F73A,UniRef:UniRef100_UPI0001B9F73A,UniRef:UniRef50_P44252,UniRef:UniRef90_E6KY16 contig_12 Pyrodigal gene 36413 37099 . + . ID=GCA008085315_00708_gene;locus_tag=GCA008085315_00708;gene=lolD contig_12 Pyrodigal CDS 36413 37099 . + 0 ID=GCA008085315_00708;Name=lipoprotein-releasing ABC transporter ATP-binding protein LolD;locus_tag=GCA008085315_00708;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;Dbxref=GO:0005524,GO:0042953,GO:0043190;gene=lolD;Parent=GCA008085315_00708_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1136,COG:M,RefSeq:WP_148320701.1,SO:0001217,UniParc:UPI0011D56499,UniRef:UniRef100_UPI0011D56499,UniRef:UniRef50_Q9CN78,UniRef:UniRef90_A0A336N5R8;ec_number=7.6.2.- contig_12 Pyrodigal gene 37099 38349 . + . ID=GCA008085315_00709_gene;locus_tag=GCA008085315_00709;gene=lolE contig_12 Pyrodigal CDS 37099 38349 . + 0 ID=GCA008085315_00709;Name=lipoprotein-releasing ABC transporter permease subunit LolE;locus_tag=GCA008085315_00709;product=lipoprotein-releasing ABC transporter permease subunit LolE;Dbxref=GO:0016020,GO:0042953,GO:0044874;gene=lolE;Parent=GCA008085315_00709_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4591,COG:M,RefSeq:WP_005545337.1,SO:0001217,UniParc:UPI0001B9F73C,UniRef:UniRef100_UPI0001B9F73C,UniRef:UniRef50_P44250,UniRef:UniRef90_E6KY14 contig_12 Pyrodigal gene 38450 39529 . + . ID=GCA008085315_00710_gene;locus_tag=GCA008085315_00710;gene=aroG contig_12 Pyrodigal CDS 38450 39529 . + 0 ID=GCA008085315_00710;Name=3-deoxy-7-phosphoheptulonate synthase AroG;locus_tag=GCA008085315_00710;product=3-deoxy-7-phosphoheptulonate synthase AroG;Dbxref=GO:0003849,GO:0009073;gene=aroG;Parent=GCA008085315_00710_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0722,COG:E,KEGG:K01626,RefSeq:WP_012820942.1,SO:0001217,UniParc:UPI0001B9F73D,UniRef:UniRef100_UPI0001B9F73D,UniRef:UniRef50_P44303,UniRef:UniRef90_A0A142G2W6;ec_number=2.5.1.54 contig_12 Pyrodigal gene 39675 41081 . + . ID=GCA008085315_00711_gene;locus_tag=GCA008085315_00711;gene=dnaB contig_12 Pyrodigal CDS 39675 41081 . + 0 ID=GCA008085315_00711;Name=replicative DNA helicase;locus_tag=GCA008085315_00711;product=replicative DNA helicase;gene=dnaB;Parent=GCA008085315_00711_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0305,COG:L,RefSeq:WP_005545332.1,SO:0001217,UniParc:UPI0001B9F73F,UniRef:UniRef100_UPI0001B9F73F,UniRef:UniRef50_P45256,UniRef:UniRef90_E6KY12;ec_number=3.6.4.12 contig_12 Pyrodigal gene 41105 42187 . + . ID=GCA008085315_00712_gene;locus_tag=GCA008085315_00712;gene=alr contig_12 Pyrodigal CDS 41105 42187 . + 0 ID=GCA008085315_00712;Name=alanine racemase;locus_tag=GCA008085315_00712;product=alanine racemase;Dbxref=GO:0006522,GO:0008784,GO:0009252;gene=alr;Parent=GCA008085315_00712_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0787,COG:M,KEGG:K01775,RefSeq:WP_005544553.1,SO:0001217,UniParc:UPI0001B9F740,UniRef:UniRef100_A0A142G2W8,UniRef:UniRef50_A3MYX4,UniRef:UniRef90_A0A142G2W8;ec_number=5.1.1.1 contig_12 Pyrodigal gene 42203 43852 . + . ID=GCA008085315_00713_gene;locus_tag=GCA008085315_00713;gene=pgi contig_12 Pyrodigal CDS 42203 43852 . + 0 ID=GCA008085315_00713;Name=glucose-6-phosphate isomerase;locus_tag=GCA008085315_00713;product=glucose-6-phosphate isomerase;Dbxref=GO:0004347,GO:0006094,GO:0006096;gene=pgi;Parent=GCA008085315_00713_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0166,COG:G,RefSeq:WP_005545329.1,SO:0001217,UniParc:UPI0001B9F741,UniRef:UniRef100_UPI0001B9F741,UniRef:UniRef50_A0A5D0EL39,UniRef:UniRef90_A0A5D0EL39;ec_number=5.3.1.9 contig_12 Pyrodigal gene 43992 44465 . + . ID=GCA008085315_00714_gene;locus_tag=GCA008085315_00714;gene=ribE contig_12 Pyrodigal CDS 43992 44465 . + 0 ID=GCA008085315_00714;Name=6%2C7-dimethyl-8-ribityllumazine synthase;locus_tag=GCA008085315_00714;product=6%2C7-dimethyl-8-ribityllumazine synthase;Dbxref=GO:0000906,GO:0009349;gene=ribE;Parent=GCA008085315_00714_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0054,COG:H,KEGG:K00794,RefSeq:WP_005537755.1,SO:0001217,UniParc:UPI0001B9F742,UniRef:UniRef100_A0A142G2X1,UniRef:UniRef50_O66529,UniRef:UniRef90_A0A142G2X1;ec_number=2.5.1.78 contig_12 Pyrodigal gene 44472 44897 . + . ID=GCA008085315_00715_gene;locus_tag=GCA008085315_00715;gene=nusB contig_12 Pyrodigal CDS 44472 44897 . + 0 ID=GCA008085315_00715;Name=transcription antitermination factor NusB;locus_tag=GCA008085315_00715;product=transcription antitermination factor NusB;Dbxref=GO:0006353;gene=nusB;Parent=GCA008085315_00715_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0781,COG:K,KEGG:K03625,RefSeq:WP_005545327.1,SO:0001217,UniParc:UPI0001B9F743,UniRef:UniRef100_UPI0001B9F743,UniRef:UniRef50_Q8ZC42,UniRef:UniRef90_A0A0K1N3J4 contig_12 Pyrodigal gene 44916 45899 . + . ID=GCA008085315_00716_gene;locus_tag=GCA008085315_00716;gene=thiL contig_12 Pyrodigal CDS 44916 45899 . + 0 ID=GCA008085315_00716;Name=thiamine-phosphate kinase;locus_tag=GCA008085315_00716;product=thiamine-phosphate kinase;Dbxref=GO:0009030,GO:0009228;gene=thiL;Parent=GCA008085315_00716_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0611,COG:H,KEGG:K00946,RefSeq:WP_005545326.1,SO:0001217,UniParc:UPI0001B9F744,UniRef:UniRef100_UPI0001B9F744,UniRef:UniRef50_A0A068QP23,UniRef:UniRef90_A0A142G2X3;ec_number=2.7.4.16 contig_12 Pyrodigal gene 45909 46400 . + . ID=GCA008085315_00717_gene;locus_tag=GCA008085315_00717;gene=pgpA contig_12 Pyrodigal CDS 45909 46400 . + 0 ID=GCA008085315_00717;Name=Phosphatidylglycerophosphatase A;locus_tag=GCA008085315_00717;product=Phosphatidylglycerophosphatase A;gene=pgpA;Parent=GCA008085315_00717_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1267,COG:I,KEGG:K01095,RefSeq:WP_005545324.1,SO:0001217,UniParc:UPI0001B9F745,UniRef:UniRef100_UPI0001B9F745,UniRef:UniRef50_Q9CMT1,UniRef:UniRef90_A0A5D0EL05;ec_number=3.1.3.27 contig_12 Pyrodigal gene 46409 47029 . + . ID=GCA008085315_00718_gene;locus_tag=GCA008085315_00718;gene=rhtB contig_12 Pyrodigal CDS 46409 47029 . + 0 ID=GCA008085315_00718;Name=Threonine efflux protein;locus_tag=GCA008085315_00718;product=Threonine efflux protein;gene=rhtB;Parent=GCA008085315_00718_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1280,COG:E,KEGG:K05835,RefSeq:WP_005545322.1,SO:0001217,UniParc:UPI0001B9F746,UniRef:UniRef100_UPI0001B9F746,UniRef:UniRef50_Q57320,UniRef:UniRef90_A0A5D0EKC7 contig_12 Pyrodigal gene 47051 47863 . + . ID=GCA008085315_00719_gene;locus_tag=GCA008085315_00719;gene=dapB contig_12 Pyrodigal CDS 47051 47863 . + 0 ID=GCA008085315_00719;Name=4-hydroxy-tetrahydrodipicolinate reductase;locus_tag=GCA008085315_00719;product=4-hydroxy-tetrahydrodipicolinate reductase;Dbxref=GO:0008839,GO:0009089;gene=dapB;Parent=GCA008085315_00719_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0289,COG:E,KEGG:K00215,RefSeq:WP_005545320.1,SO:0001217,UniParc:UPI0001B9F747,UniRef:UniRef100_UPI0001B9F747,UniRef:UniRef50_P04036,UniRef:UniRef90_E6KY04;ec_number=1.17.1.8 contig_12 Pyrodigal gene 47975 48223 . - . ID=GCA008085315_00720_gene;locus_tag=GCA008085315_00720;gene=yfaE contig_12 Pyrodigal CDS 47975 48223 . - 0 ID=GCA008085315_00720;Name=class I ribonucleotide reductase maintenance protein YfaE;locus_tag=GCA008085315_00720;product=class I ribonucleotide reductase maintenance protein YfaE;Dbxref=GO:0051537;gene=yfaE;Parent=GCA008085315_00720_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0633,RefSeq:WP_005545316.1,SO:0001217,UniParc:UPI0001B9F749,UniRef:UniRef100_UPI0001B9F749,UniRef:UniRef50_A0A448Q7P4,UniRef:UniRef90_A0A3S4TQV9 contig_12 Pyrodigal gene 48291 48560 . - . ID=GCA008085315_00721_gene;locus_tag=GCA008085315_00721 contig_12 Pyrodigal CDS 48291 48560 . - 0 ID=GCA008085315_00721;Name=hypothetical protein;locus_tag=GCA008085315_00721;product=hypothetical protein;Parent=GCA008085315_00721_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005575381.1,SO:0001217,UniParc:UPI0001B9F74A,UniRef:UniRef100_UPI0001B9F74A,UniRef:UniRef50_A0A5D0EKZ2,UniRef:UniRef90_A0A5D0EKZ2 contig_12 Pyrodigal gene 48582 49712 . - . ID=GCA008085315_00722_gene;locus_tag=GCA008085315_00722;gene=nrdB contig_12 Pyrodigal CDS 48582 49712 . - 0 ID=GCA008085315_00722;Name=class Ia ribonucleoside-diphosphate reductase subunit beta;locus_tag=GCA008085315_00722;product=class Ia ribonucleoside-diphosphate reductase subunit beta;Dbxref=GO:0004748,GO:0009263,GO:0016491,GO:0046872;gene=nrdB;Parent=GCA008085315_00722_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0208,COG:F,RefSeq:WP_148320705.1,SO:0001217,UniParc:UPI0011D89469,UniRef:UniRef100_UPI0011D89469,UniRef:UniRef50_P69924,UniRef:UniRef90_P43755;ec_number=1.17.4.1 contig_12 Pyrodigal gene 49735 49911 . - . ID=GCA008085315_00723_gene;locus_tag=GCA008085315_00723 contig_12 Pyrodigal CDS 49735 49911 . - 0 ID=GCA008085315_00723;Name=hypothetical protein;locus_tag=GCA008085315_00723;product=hypothetical protein;Parent=GCA008085315_00723_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_019518397.1,SO:0001217,UniParc:UPI0003637EFF,UniRef:UniRef100_UPI0003637EFF,UniRef:UniRef50_UPI0003637EFF,UniRef:UniRef90_UPI0003637EFF contig_12 Pyrodigal gene 49914 50570 . - . ID=GCA008085315_00724_gene;locus_tag=GCA008085315_00724 contig_12 Pyrodigal CDS 49914 50570 . - 0 ID=GCA008085315_00724;Name=hypothetical protein;locus_tag=GCA008085315_00724;product=hypothetical protein;Parent=GCA008085315_00724_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_019518396.1,SO:0001217,UniParc:UPI000375A97A,UniRef:UniRef100_UPI000375A97A,UniRef:UniRef50_F9GQH2,UniRef:UniRef90_UPI001E4EFF6A contig_12 Pyrodigal gene 50624 52894 . - . ID=GCA008085315_00725_gene;locus_tag=GCA008085315_00725;gene=nrdA contig_12 Pyrodigal CDS 50624 52894 . - 0 ID=GCA008085315_00725;Name=class 1a ribonucleoside-diphosphate reductase subunit alpha;locus_tag=GCA008085315_00725;product=class 1a ribonucleoside-diphosphate reductase subunit alpha;Dbxref=GO:0004748,GO:0005524,GO:0005971,GO:0006260,GO:0009263;gene=nrdA;Parent=GCA008085315_00725_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0209,COG:F,RefSeq:WP_005545205.1,SO:0001217,UniParc:UPI0001B9F74C,UniRef:UniRef100_UPI0001B9F74C,UniRef:UniRef50_P00452,UniRef:UniRef90_P43754;ec_number=1.17.4.1 contig_12 Pyrodigal gene 53197 53586 . - . ID=GCA008085315_00726_gene;locus_tag=GCA008085315_00726 contig_12 Pyrodigal CDS 53197 53586 . - 0 ID=GCA008085315_00726;Name=Site-specific DNA-methyltransferase (adenine-specific);locus_tag=GCA008085315_00726;product=Site-specific DNA-methyltransferase (adenine-specific);Parent=GCA008085315_00726_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A2N2RDP8 contig_12 Pyrodigal gene 53656 54669 . - . ID=GCA008085315_00727_gene;locus_tag=GCA008085315_00727 contig_12 Pyrodigal CDS 53656 54669 . - 0 ID=GCA008085315_00727;Name=Type I restriction and modification enzyme -subunit R C terminal family protein;locus_tag=GCA008085315_00727;product=Type I restriction and modification enzyme -subunit R C terminal family protein;Parent=GCA008085315_00727_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A7H1MAF6 contig_12 Pyrodigal gene 54940 55968 . + . ID=GCA008085315_00728_gene;locus_tag=GCA008085315_00728;gene=afuA contig_12 Pyrodigal CDS 54940 55968 . + 0 ID=GCA008085315_00728;Name=ABC transporter substrate-binding protein;locus_tag=GCA008085315_00728;product=ABC transporter substrate-binding protein;gene=afuA;Parent=GCA008085315_00728_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1840,COG:GH,KEGG:K02012,RefSeq:WP_005545212.1,SO:0001217,UniParc:UPI00022AD38F,UniRef:UniRef100_UPI00022AD38F,UniRef:UniRef50_Q9CP55,UniRef:UniRef90_A0A142G2Y3 contig_12 Pyrodigal gene 56020 58050 . + . ID=GCA008085315_00729_gene;locus_tag=GCA008085315_00729;gene=fbpB contig_12 Pyrodigal CDS 56020 58050 . + 0 ID=GCA008085315_00729;Name=Iron ABC transporter permease;locus_tag=GCA008085315_00729;product=Iron ABC transporter permease;gene=fbpB;Parent=GCA008085315_00729_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1178,COG:P,KEGG:K02011,RefSeq:WP_148320708.1,SO:0001217,UniParc:UPI0011D96C38,UniRef:UniRef100_UPI0011D96C38,UniRef:UniRef50_Q57341,UniRef:UniRef90_A0A142G2Y4 contig_12 Pyrodigal gene 58034 59074 . + . ID=GCA008085315_00730_gene;locus_tag=GCA008085315_00730;gene=potA contig_12 Pyrodigal CDS 58034 59074 . + 0 ID=GCA008085315_00730;Name=ATP-binding cassette domain-containing protein;locus_tag=GCA008085315_00730;product=ATP-binding cassette domain-containing protein;gene=potA;Parent=GCA008085315_00730_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3842,COG:E,RefSeq:WP_005588380.1,SO:0001217,UniParc:UPI0001B9F751,UniRef:UniRef100_UPI0001B9F751,UniRef:UniRef50_E6KXY9,UniRef:UniRef90_A0A5D0EKD6 contig_12 Pyrodigal gene 59131 61182 . - . ID=GCA008085315_00731_gene;locus_tag=GCA008085315_00731;gene=amyA contig_12 Pyrodigal CDS 59131 61182 . - 0 ID=GCA008085315_00731;Name=alpha-amylase;locus_tag=GCA008085315_00731;product=alpha-amylase;gene=amyA;Parent=GCA008085315_00731_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0366,COG:G,KEGG:K01176,RefSeq:WP_005545220.1,SO:0001217,UniParc:UPI00022BFF62,UniRef:UniRef100_UPI00022BFF62,UniRef:UniRef50_P25718,UniRef:UniRef90_A0A5D0EK89;ec_number=3.2.1.1 contig_12 Pyrodigal gene 61277 62167 . - . ID=GCA008085315_00732_gene;locus_tag=GCA008085315_00732;gene=malG contig_12 Pyrodigal CDS 61277 62167 . - 0 ID=GCA008085315_00732;Name=maltose ABC transporter permease MalG;locus_tag=GCA008085315_00732;product=maltose ABC transporter permease MalG;Dbxref=GO:0016020,GO:0055085;gene=malG;Parent=GCA008085315_00732_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3833,COG:G,RefSeq:WP_005537798.1,SO:0001217,UniParc:UPI0001CA7590,UniRef:UniRef100_A0A5D0EK85,UniRef:UniRef50_Q5DZC9,UniRef:UniRef90_Q65QT3;ec_number=7.5.2.1 contig_12 Pyrodigal gene 62189 63733 . - . ID=GCA008085315_00733_gene;locus_tag=GCA008085315_00733;gene=malF contig_12 Pyrodigal CDS 62189 63733 . - 0 ID=GCA008085315_00733;Name=maltose ABC transporter permease MalF;locus_tag=GCA008085315_00733;product=maltose ABC transporter permease MalF;Dbxref=GO:0043190,GO:0055085;gene=malF;Parent=GCA008085315_00733_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1175,COG:G,KEGG:K10109,RefSeq:WP_005545222.1,SO:0001217,UniParc:UPI0001B9F79E,UniRef:UniRef100_UPI0001B9F79E,UniRef:UniRef50_P02916,UniRef:UniRef90_A0A5D0EKZ9;ec_number=7.5.2.1 contig_12 Pyrodigal gene 63857 65047 . - . ID=GCA008085315_00734_gene;locus_tag=GCA008085315_00734;gene=malE contig_12 Pyrodigal CDS 63857 65047 . - 0 ID=GCA008085315_00734;Name=maltose/maltodextrin ABC transporter substrate-binding protein MalE;locus_tag=GCA008085315_00734;product=maltose/maltodextrin ABC transporter substrate-binding protein MalE;Dbxref=GO:0008643,GO:0015144,GO:0055085;gene=malE;Parent=GCA008085315_00734_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2182,COG:G,KEGG:K10108,RefSeq:WP_005545224.1,SO:0001217,UniParc:UPI0001B9F7A0,UniRef:UniRef100_UPI0001B9F7A0,UniRef:UniRef50_Q5DZC7,UniRef:UniRef90_A0A5D0EL53;ec_number=7.5.2.1 contig_12 Pyrodigal gene 65504 66622 . + . ID=GCA008085315_00735_gene;locus_tag=GCA008085315_00735;gene=malK contig_12 Pyrodigal CDS 65504 66622 . + 0 ID=GCA008085315_00735;Name=maltose/maltodextrin ABC transporter ATP-binding protein MalK;locus_tag=GCA008085315_00735;product=maltose/maltodextrin ABC transporter ATP-binding protein MalK;Dbxref=GO:0005524,GO:0008643,GO:0043190,GO:0055085,GO:0140359;gene=malK;Parent=GCA008085315_00735_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3839,COG:G,RefSeq:WP_005545226.1,SO:0001217,UniParc:UPI0001B9F7A1,UniRef:UniRef100_UPI0001B9F7A1,UniRef:UniRef50_Q6LK87,UniRef:UniRef90_C9PPE6;ec_number=7.5.2.1 contig_12 Pyrodigal gene 66699 67982 . + . ID=GCA008085315_00736_gene;locus_tag=GCA008085315_00736;gene=lamB contig_12 Pyrodigal CDS 66699 67982 . + 0 ID=GCA008085315_00736;Name=maltoporin;locus_tag=GCA008085315_00736;product=maltoporin;gene=lamB;Parent=GCA008085315_00736_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4580,COG:G,KEGG:K02024,RefSeq:WP_005545228.1,SO:0001217,UniParc:UPI0001B9F7A2,UniRef:UniRef100_UPI0001B9F7A2,UniRef:UniRef50_A0A142G2Z1,UniRef:UniRef90_UPI0001B9F7A2 contig_12 Pyrodigal gene 68068 68967 . + . ID=GCA008085315_00737_gene;locus_tag=GCA008085315_00737;gene=malM contig_12 Pyrodigal CDS 68068 68967 . + 0 ID=GCA008085315_00737;Name=maltose operon protein MalM;locus_tag=GCA008085315_00737;product=maltose operon protein MalM;Dbxref=GO:0008643,GO:0042597;gene=malM;Parent=GCA008085315_00737_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148320710.1,SO:0001217,UniParc:UPI0011D3B39D,UniRef:UniRef100_UPI0011D3B39D,UniRef:UniRef50_A0A1V3INP0,UniRef:UniRef90_A0A5D0ELX8 contig_12 Pyrodigal gene 69345 70076 . - . ID=GCA008085315_00738_gene;locus_tag=GCA008085315_00738;gene=moeB contig_12 Pyrodigal CDS 69345 70076 . - 0 ID=GCA008085315_00738;Name=molybdopterin-synthase adenylyltransferase MoeB;locus_tag=GCA008085315_00738;product=molybdopterin-synthase adenylyltransferase MoeB;Dbxref=GO:0006777,GO:0008641;gene=moeB;Parent=GCA008085315_00738_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0476,COG:H,RefSeq:WP_005545232.1,SO:0001217,UniParc:UPI0001B9F7A5,UniRef:UniRef100_UPI0001B9F7A5,UniRef:UniRef50_P45211,UniRef:UniRef90_A0A5D0ELP8;ec_number=2.7.7.80 contig_12 Pyrodigal gene 70092 71306 . - . ID=GCA008085315_00739_gene;locus_tag=GCA008085315_00739;gene=moeA contig_12 Pyrodigal CDS 70092 71306 . - 0 ID=GCA008085315_00739;Name=molybdopterin molybdotransferase MoeA;locus_tag=GCA008085315_00739;product=molybdopterin molybdotransferase MoeA;Dbxref=GO:0006777,GO:0032324;gene=moeA;Parent=GCA008085315_00739_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0303,COG:H,RefSeq:WP_148321272.1,SO:0001217,UniParc:UPI0011D3C362,UniRef:UniRef100_UPI0011D3C362,UniRef:UniRef50_Q9CMW0,UniRef:UniRef90_A0A5D0ELC0;ec_number=2.10.1.1 contig_12 Pyrodigal gene 71435 72091 . + . ID=GCA008085315_00740_gene;locus_tag=GCA008085315_00740;gene=folE contig_12 Pyrodigal CDS 71435 72091 . + 0 ID=GCA008085315_00740;Name=GTP cyclohydrolase I FolE;locus_tag=GCA008085315_00740;product=GTP cyclohydrolase I FolE;Dbxref=GO:0003934,GO:0046654;gene=folE;Parent=GCA008085315_00740_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0302,COG:H,KEGG:K01495,RefSeq:WP_005545236.1,SO:0001217,UniParc:UPI0001B9F7A7,UniRef:UniRef100_UPI0001B9F7A7,UniRef:UniRef50_P43866,UniRef:UniRef90_E6KXB3;ec_number=3.5.4.16 contig_12 Pyrodigal gene 72189 73631 . - . ID=GCA008085315_00741_gene;locus_tag=GCA008085315_00741;gene=dacB contig_12 Pyrodigal CDS 72189 73631 . - 0 ID=GCA008085315_00741;Name=serine-type D-Ala-D-Ala carboxypeptidase;locus_tag=GCA008085315_00741;product=serine-type D-Ala-D-Ala carboxypeptidase;Dbxref=GO:0004185,GO:0006508;gene=dacB;Parent=GCA008085315_00741_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2027,COG:M,KEGG:K07259,RefSeq:WP_005545239.1,SO:0001217,UniParc:UPI0001B9F7A8,UniRef:UniRef100_UPI0001B9F7A8,UniRef:UniRef50_P45161,UniRef:UniRef90_A0A5D0EKM1;ec_number=3.4.21.- contig_12 Infernal gene 73627 73709 . + . ID=GCA008085315_00742_gene;locus_tag=GCA008085315_00742;gene=AaHKsRNA69 contig_12 Infernal ncRNA 73627 73709 6.4e-18 + . ID=GCA008085315_00742;Name=Aggregatibacter sRNA 69;locus_tag=GCA008085315_00742;product=Aggregatibacter sRNA 69;Dbxref=RFAM:RF02904;Parent=GCA008085315_00742_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02904 contig_12 Pyrodigal gene 73792 74268 . + . ID=GCA008085315_00743_gene;locus_tag=GCA008085315_00743;gene=greA contig_12 Pyrodigal CDS 73792 74268 . + 0 ID=GCA008085315_00743;Name=transcription elongation factor GreA;locus_tag=GCA008085315_00743;product=transcription elongation factor GreA;Dbxref=GO:0003677,GO:0032784,GO:0070063;gene=greA;Parent=GCA008085315_00743_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0782,COG:K,RefSeq:WP_005542429.1,SO:0001217,UniParc:UPI0001B9F7A9,UniRef:UniRef100_A0A142G2J8,UniRef:UniRef50_Q9KU89,UniRef:UniRef90_A0A142G2J8 contig_12 Pyrodigal gene 74343 74645 . - . ID=GCA008085315_00744_gene;locus_tag=GCA008085315_00744;gene=yhbY contig_12 Pyrodigal CDS 74343 74645 . - 0 ID=GCA008085315_00744;Name=ribosome assembly RNA-binding protein YhbY;locus_tag=GCA008085315_00744;product=ribosome assembly RNA-binding protein YhbY;Dbxref=GO:0003723;gene=yhbY;Parent=GCA008085315_00744_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1534,COG:J,RefSeq:WP_005545243.1,SO:0001217,UniParc:UPI0001B9F7AA,UniRef:UniRef100_G4AAG5,UniRef:UniRef50_P71376,UniRef:UniRef90_G4AAG5 contig_12 Pyrodigal gene 74813 75124 . + . ID=GCA008085315_00745_gene;locus_tag=GCA008085315_00745 contig_12 Pyrodigal CDS 74813 75124 . + 0 ID=GCA008085315_00745;Name=Type II toxin-antitoxin system RelE/ParE family toxin;locus_tag=GCA008085315_00745;product=Type II toxin-antitoxin system RelE/ParE family toxin;Parent=GCA008085315_00745_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3657,COG:V,RefSeq:WP_148333953.1,SO:0001217,UniParc:UPI0011DA5DA1,UniRef:UniRef100_UPI0011DA5DA1,UniRef:UniRef50_P44190,UniRef:UniRef90_A0A5D0ELF7 contig_12 Pyrodigal gene 75109 75405 . + . ID=GCA008085315_00746_gene;locus_tag=GCA008085315_00746;gene=pA5055 contig_12 Pyrodigal CDS 75109 75405 . + 0 ID=GCA008085315_00746;Name=Addiction module antitoxin;locus_tag=GCA008085315_00746;product=Addiction module antitoxin;gene=pA5055;Parent=GCA008085315_00746_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3636,COG:X,RefSeq:WP_005545245.1,SO:0001217,UniParc:UPI0001B9F7AC,UniRef:UniRef100_UPI0001B9F7AC,UniRef:UniRef50_P44191,UniRef:UniRef90_A0A5D0EMG8 contig_12 Pyrodigal gene 75438 76052 . - . ID=GCA008085315_00747_gene;locus_tag=GCA008085315_00747;gene=ribC contig_12 Pyrodigal CDS 75438 76052 . - 0 ID=GCA008085315_00747;Name=riboflavin synthase subunit alpha;locus_tag=GCA008085315_00747;product=riboflavin synthase subunit alpha;gene=ribC;Parent=GCA008085315_00747_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0307,COG:H,KEGG:K00793,RefSeq:WP_005575423.1,SO:0001217,UniParc:UPI0001B9F7AD,UniRef:UniRef100_UPI0001B9F7AD,UniRef:UniRef50_P0AFU8,UniRef:UniRef90_A0A5D0EM25;ec_number=2.5.1.9 contig_12 Pyrodigal gene 76079 77476 . + . ID=GCA008085315_00748_gene;locus_tag=GCA008085315_00748;gene=norM contig_12 Pyrodigal CDS 76079 77476 . + 0 ID=GCA008085315_00748;Name=Multidrug-efflux transporter;locus_tag=GCA008085315_00748;product=Multidrug-efflux transporter;gene=norM;Parent=GCA008085315_00748_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0534,COG:V,RefSeq:WP_005545249.1,SO:0001217,UniParc:UPI00022AE470,UniRef:UniRef100_UPI00022AE470,UniRef:UniRef50_P45272,UniRef:UniRef90_A0A5D0EM18 contig_12 Infernal gene 77545 77645 . + . ID=GCA008085315_00749_gene;locus_tag=GCA008085315_00749;gene=AaHKsRNA22 contig_12 Infernal ncRNA 77545 77645 1.5e-15 + . ID=GCA008085315_00749;Name=Aggregatibacter sRNA 22;locus_tag=GCA008085315_00749;product=Aggregatibacter sRNA 22;Dbxref=RFAM:RF02902;Parent=GCA008085315_00749_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02902 contig_12 Pyrodigal gene 77781 78260 . - . ID=GCA008085315_00750_gene;locus_tag=GCA008085315_00750;gene=ybaK contig_12 Pyrodigal CDS 77781 78260 . - 0 ID=GCA008085315_00750;Name=Cys-tRNA(Pro) deacylase;locus_tag=GCA008085315_00750;product=Cys-tRNA(Pro) deacylase;Dbxref=GO:0002161,GO:0043039;gene=ybaK;Parent=GCA008085315_00750_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2606,COG:J,RefSeq:WP_005545251.1,SO:0001217,UniParc:UPI0001B9F7AF,UniRef:UniRef100_UPI0001B9F7AF,UniRef:UniRef50_P45202,UniRef:UniRef90_E6KXC1 contig_12 Pyrodigal gene 78321 79292 . + . ID=GCA008085315_00751_gene;locus_tag=GCA008085315_00751 contig_12 Pyrodigal CDS 78321 79292 . + 0 ID=GCA008085315_00751;Name=oxidoreductase;locus_tag=GCA008085315_00751;product=oxidoreductase;Parent=GCA008085315_00751_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148320717.1,SO:0001217,UniParc:UPI0011DC3838,UniRef:UniRef100_UPI0011DC3838,UniRef:UniRef50_P45201,UniRef:UniRef90_A0A5D0EKN5 contig_12 Pyrodigal gene 79348 79671 . + . ID=GCA008085315_00752_gene;locus_tag=GCA008085315_00752 contig_12 Pyrodigal CDS 79348 79671 . + 0 ID=GCA008085315_00752;Name=DUF1919 domain-containing protein;locus_tag=GCA008085315_00752;product=DUF1919 domain-containing protein;Parent=GCA008085315_00752_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005575427.1,SO:0001217,UniParc:UPI0001B9F7B1,UniRef:UniRef100_UPI0001B9F7B1,UniRef:UniRef50_UPI0001B9F7B1,UniRef:UniRef90_UPI0001B9F7B1 contig_12 Pyrodigal gene 79769 79921 . - . ID=GCA008085315_00753_gene;locus_tag=GCA008085315_00753 contig_12 Pyrodigal CDS 79769 79921 . - 0 ID=GCA008085315_00753;Name=DNA-binding protein;locus_tag=GCA008085315_00753;product=DNA-binding protein;Parent=GCA008085315_00753_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148320719.1,SO:0001217,UniParc:UPI0011D3F9A7,UniRef:UniRef100_UPI0011D3F9A7,UniRef:UniRef50_UPI0011D3F9A7,UniRef:UniRef90_UPI0011D3F9A7 contig_12 Pyrodigal gene 79934 80200 . - . ID=GCA008085315_00754_gene;locus_tag=GCA008085315_00754 contig_12 Pyrodigal CDS 79934 80200 . - 0 ID=GCA008085315_00754;Name=HTH domain-containing protein;locus_tag=GCA008085315_00754;product=HTH domain-containing protein;Parent=GCA008085315_00754_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005547848.1,SO:0001217,UniParc:UPI0001B9F7B6,UniRef:UniRef100_UPI0001B9F7B6,UniRef:UniRef50_Q7VNM3,UniRef:UniRef90_G4A6K0 contig_12 Pyrodigal gene 80321 81115 . + . ID=GCA008085315_00755_gene;locus_tag=GCA008085315_00755 contig_12 Pyrodigal CDS 80321 81115 . + 0 ID=GCA008085315_00755;Name=putative DNA-binding protein;locus_tag=GCA008085315_00755;product=putative DNA-binding protein;Parent=GCA008085315_00755_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148320723.1,SO:0001217,UniParc:UPI0011DB0A4D,UniRef:UniRef100_UPI0011DB0A4D,UniRef:UniRef50_A0A379B3B8,UniRef:UniRef90_G4A6J9 contig_12 Pyrodigal gene 81531 81884 . + . ID=GCA008085315_00756_gene;locus_tag=GCA008085315_00756 contig_12 Pyrodigal CDS 81531 81884 . + 0 ID=GCA008085315_00756;Name=ABC transporter permease subunit;locus_tag=GCA008085315_00756;product=ABC transporter permease subunit;Parent=GCA008085315_00756_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_Q57380,UniRef:UniRef90_UPI00038111DB contig_12 Pyrodigal gene 81884 82147 . + . ID=GCA008085315_00757_gene;locus_tag=GCA008085315_00757;gene=tauB;pseudogene=unitary contig_12 Pyrodigal CDS 81884 82147 . + 0 ID=GCA008085315_00757;Name=ABC transporter ATP-binding protein;locus_tag=GCA008085315_00757;product=ABC transporter ATP-binding protein;pseudogene=unitary;gene=tauB;Parent=GCA008085315_00757_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1116,COG:P,SO:0001217,UniRef:UniRef50_A0A376DJF3,UniRef:UniRef90_A0A5D0F773 contig_12 Pyrodigal gene 82150 82497 . + . ID=GCA008085315_00758_gene;locus_tag=GCA008085315_00758;gene=cysA;pseudogene=unitary contig_12 Pyrodigal CDS 82150 82497 . + 0 ID=GCA008085315_00758;Name=Sulfate/thiosulfate import ATP-binding protein CysA;locus_tag=GCA008085315_00758;product=Sulfate/thiosulfate import ATP-binding protein CysA;pseudogene=unitary;gene=cysA;Parent=GCA008085315_00758_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A376DJF3,UniRef:UniRef90_G4AAI3 contig_12 Pyrodigal gene 82494 83354 . + . ID=GCA008085315_00759_gene;locus_tag=GCA008085315_00759;gene=nadC contig_12 Pyrodigal CDS 82494 83354 . + 0 ID=GCA008085315_00759;Name=Putative pyrophosphorylase ModD;locus_tag=GCA008085315_00759;product=Putative pyrophosphorylase ModD;gene=nadC;Parent=GCA008085315_00759_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0157,COG:H,KEGG:K03813,RefSeq:WP_148320725.1,SO:0001217,UniParc:UPI0011D4FE43,UniRef:UniRef100_UPI0011D4FE43,UniRef:UniRef50_Q57278,UniRef:UniRef90_A0A142FYI5;ec_number=2.4.2.- contig_12 Pyrodigal gene 83650 85098 . + . ID=GCA008085315_00760_gene;locus_tag=GCA008085315_00760;gene=tldD contig_12 Pyrodigal CDS 83650 85098 . + 0 ID=GCA008085315_00760;Name=metalloprotease TldD;locus_tag=GCA008085315_00760;product=metalloprotease TldD;Dbxref=GO:0006508,GO:0008237;gene=tldD;Parent=GCA008085315_00760_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0312,COG:OV,KEGG:K03568,RefSeq:WP_005545302.1,SO:0001217,UniParc:UPI0001B9F7BE,UniRef:UniRef100_UPI0001B9F7BE,UniRef:UniRef50_Q89AE1,UniRef:UniRef90_E6KWM1;ec_number=3.4.24.- contig_12 Pyrodigal gene 85149 90920 . + . ID=GCA008085315_00761_gene;locus_tag=GCA008085315_00761;gene=yfaS contig_12 Pyrodigal CDS 85149 90920 . + 0 ID=GCA008085315_00761;Name=Alpha-2-macroglobulin;locus_tag=GCA008085315_00761;product=Alpha-2-macroglobulin;gene=yfaS;Parent=GCA008085315_00761_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2373,COG:R,RefSeq:WP_148333954.1,SO:0001217,UniParc:UPI0011D810A7,UniRef:UniRef100_UPI0011D810A7,UniRef:UniRef50_Q9CMZ1,UniRef:UniRef90_A0A5D0EP04 contig_12 Pyrodigal gene 91053 92102 . + . ID=GCA008085315_00762_gene;locus_tag=GCA008085315_00762;gene=yeiH contig_12 Pyrodigal CDS 91053 92102 . + 0 ID=GCA008085315_00762;Name=YeiH family putative sulfate export transporter;locus_tag=GCA008085315_00762;product=YeiH family putative sulfate export transporter;gene=yeiH;Parent=GCA008085315_00762_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2855,COG:S,KEGG:K19239,SO:0001217,UniRef:UniRef50_P45290,UniRef:UniRef90_A0A5D0EP00 contig_12 Pyrodigal gene 92222 94579 . + . ID=GCA008085315_00763_gene;locus_tag=GCA008085315_00763;gene=pbpC contig_12 Pyrodigal CDS 92222 94579 . + 0 ID=GCA008085315_00763;Name=penicillin-binding protein 1C;locus_tag=GCA008085315_00763;product=penicillin-binding protein 1C;Dbxref=GO:0003824,GO:0009252,GO:0009274;gene=pbpC;Parent=GCA008085315_00763_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4953,COG:M,KEGG:K05367,RefSeq:WP_012820960.1,SO:0001217,UniParc:UPI0001B9F80F,UniRef:UniRef100_UPI0001B9F80F,UniRef:UniRef50_A0A8B2U556,UniRef:UniRef90_A0A5D0EP60;ec_number=2.4.99.28 contig_12 Pyrodigal gene 94689 95363 . - . ID=GCA008085315_00764_gene;locus_tag=GCA008085315_00764;gene=ulaD contig_12 Pyrodigal CDS 94689 95363 . - 0 ID=GCA008085315_00764;Name=3-keto-L-gulonate-6-phosphate decarboxylase;locus_tag=GCA008085315_00764;product=3-keto-L-gulonate-6-phosphate decarboxylase;gene=ulaD;Parent=GCA008085315_00764_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0269,COG:G,KEGG:K03078,RefSeq:WP_005541897.1,SO:0001217,UniParc:UPI0001CA7A42,UniRef:UniRef100_A0A142FYH8,UniRef:UniRef50_P44988,UniRef:UniRef90_A0A142FYH8;ec_number=4.1.1.85 contig_12 Pyrodigal gene 95440 95901 . - . ID=GCA008085315_00765_gene;locus_tag=GCA008085315_00765;gene=ptsN contig_12 Pyrodigal CDS 95440 95901 . - 0 ID=GCA008085315_00765;Name=Ascorbate-specific PTS system EIIA component;locus_tag=GCA008085315_00765;product=Ascorbate-specific PTS system EIIA component;gene=ptsN;Parent=GCA008085315_00765_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1762,COG:GT,RefSeq:WP_005545291.1,SO:0001217,UniParc:UPI0001B9F811,UniRef:UniRef100_UPI0001B9F811,UniRef:UniRef50_Q7MBY2,UniRef:UniRef90_A0A142FYH7 contig_12 Pyrodigal gene 95956 97728 . - . ID=GCA008085315_00766_gene;locus_tag=GCA008085315_00766;gene=sgaB contig_12 Pyrodigal CDS 95956 97728 . - 0 ID=GCA008085315_00766;Name=PTS ascorbate-specific subunit IIBC;locus_tag=GCA008085315_00766;product=PTS ascorbate-specific subunit IIBC;gene=sgaB;Parent=GCA008085315_00766_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3414,COG:G,KEGG:K03475,RefSeq:WP_148320727.1,SO:0001217,UniParc:UPI0011DBF79E,UniRef:UniRef100_UPI0011DBF79E,UniRef:UniRef50_P39301,UniRef:UniRef90_A0A336N678 contig_12 Pyrodigal gene 98076 99167 . + . ID=GCA008085315_00767_gene;locus_tag=GCA008085315_00767;gene=ulaG contig_12 Pyrodigal CDS 98076 99167 . + 0 ID=GCA008085315_00767;Name=L-ascorbate 6-phosphate lactonase;locus_tag=GCA008085315_00767;product=L-ascorbate 6-phosphate lactonase;Dbxref=GO:0019854,GO:0030145,GO:0035460;gene=ulaG;Parent=GCA008085315_00767_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2220,COG:G,KEGG:K03476,RefSeq:WP_005541905.1,SO:0001217,UniParc:UPI0001B9F813,UniRef:UniRef100_A0A142FYH5,UniRef:UniRef50_P39300,UniRef:UniRef90_A0A142FYH5;ec_number=3.1.1.- contig_12 Pyrodigal gene 99259 100008 . + . ID=GCA008085315_00768_gene;locus_tag=GCA008085315_00768;gene=ulaR contig_12 Pyrodigal CDS 99259 100008 . + 0 ID=GCA008085315_00768;Name=HTH-type transcriptional regulator UlaR;locus_tag=GCA008085315_00768;product=HTH-type transcriptional regulator UlaR;Dbxref=GO:0003700,GO:0006355;gene=ulaR;Parent=GCA008085315_00768_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1349,COG:KG,KEGG:K03477,RefSeq:WP_005545287.1,SO:0001217,UniParc:UPI0001B9F814,UniRef:UniRef100_UPI0001B9F814,UniRef:UniRef50_P0A9W0,UniRef:UniRef90_A0A5D0EPF7 contig_12 Pyrodigal gene 100049 100909 . + . ID=GCA008085315_00769_gene;locus_tag=GCA008085315_00769;gene=sgaU contig_12 Pyrodigal CDS 100049 100909 . + 0 ID=GCA008085315_00769;Name=L-ribulose-5-phosphate 3-epimerase;locus_tag=GCA008085315_00769;product=L-ribulose-5-phosphate 3-epimerase;Dbxref=GO:0005975,GO:0016861;gene=sgaU;Parent=GCA008085315_00769_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3623,COG:G,RefSeq:WP_005573669.1,SO:0001217,UniParc:UPI0001B9F815,UniRef:UniRef100_UPI0001B9F815,UniRef:UniRef50_A0A0B7LYF2,UniRef:UniRef90_A0A3S5ECX1 contig_12 Pyrodigal gene 100903 101598 . + . ID=GCA008085315_00770_gene;locus_tag=GCA008085315_00770;gene=araD contig_12 Pyrodigal CDS 100903 101598 . + 0 ID=GCA008085315_00770;Name=L-ribulose-5-phosphate 4-epimerase;locus_tag=GCA008085315_00770;product=L-ribulose-5-phosphate 4-epimerase;Dbxref=GO:0008270,GO:0008742,GO:0019568;gene=araD;Parent=GCA008085315_00770_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0235,COG:EG,RefSeq:WP_005567401.1,SO:0001217,UniParc:UPI00022AC2E8,UniRef:UniRef100_UPI00022AC2E8,UniRef:UniRef50_P08203,UniRef:UniRef90_A0A142FYH2;ec_number=5.1.3.4 contig_12 Pyrodigal gene 101681 102895 . - . ID=GCA008085315_00771_gene;locus_tag=GCA008085315_00771;gene=sdaC contig_12 Pyrodigal CDS 101681 102895 . - 0 ID=GCA008085315_00771;Name=Aromatic amino acid permease;locus_tag=GCA008085315_00771;product=Aromatic amino acid permease;gene=sdaC;Parent=GCA008085315_00771_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0814,COG:E,KEGG:K03834,RefSeq:WP_148333955.1,SO:0001217,UniParc:UPI0011D8B35F,UniRef:UniRef100_UPI0011D8B35F,UniRef:UniRef50_P44747,UniRef:UniRef90_A0A448FB49 contig_12 Pyrodigal gene 103190 103384 . + . ID=GCA008085315_00772_gene;locus_tag=GCA008085315_00772;gene=lacZ contig_12 Pyrodigal CDS 103190 103384 . + 0 ID=GCA008085315_00772;Name=beta-galactosidase;locus_tag=GCA008085315_00772;product=beta-galactosidase;gene=lacZ;Parent=GCA008085315_00772_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3250,COG:G,SO:0001217,UniRef:UniRef50_A0A142FYG4,UniRef:UniRef90_A0A142FYG4 contig_12 Pyrodigal gene 103639 103902 . - . ID=GCA008085315_00773_gene;locus_tag=GCA008085315_00773;gene=grxC contig_12 Pyrodigal CDS 103639 103902 . - 0 ID=GCA008085315_00773;Name=GrxA family glutaredoxin;locus_tag=GCA008085315_00773;product=GrxA family glutaredoxin;gene=grxC;Parent=GCA008085315_00773_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0695,COG:O,RefSeq:WP_005545275.1,SO:0001217,UniParc:UPI0001B9F81A,UniRef:UniRef100_UPI0001B9F81A,UniRef:UniRef50_A0A0U5L3Y1,UniRef:UniRef90_G4AAJ9 contig_12 Pyrodigal gene 104029 104763 . + . ID=GCA008085315_00774_gene;locus_tag=GCA008085315_00774;gene=nfsA contig_12 Pyrodigal CDS 104029 104763 . + 0 ID=GCA008085315_00774;Name=oxygen-insensitive NADPH nitroreductase;locus_tag=GCA008085315_00774;product=oxygen-insensitive NADPH nitroreductase;Dbxref=GO:0016491;gene=nfsA;Parent=GCA008085315_00774_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0778,RefSeq:WP_005545273.1,SO:0001217,UniParc:UPI0001B9F81B,UniRef:UniRef100_UPI0001B9F81B,UniRef:UniRef50_A0A1Q8Z0R6,UniRef:UniRef90_E6KYS1 contig_12 Pyrodigal gene 104782 105687 . + . ID=GCA008085315_00775_gene;locus_tag=GCA008085315_00775;gene=lysX contig_12 Pyrodigal CDS 104782 105687 . + 0 ID=GCA008085315_00775;Name=putative alpha-L-glutamate ligase;locus_tag=GCA008085315_00775;product=putative alpha-L-glutamate ligase;gene=lysX;Parent=GCA008085315_00775_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0189,COG:EHJQ,KEGG:K05844,SO:0001217,UniRef:UniRef50_P45241,UniRef:UniRef90_E6KYS0;ec_number=6.3.2.- contig_12 Pyrodigal gene 105983 106588 . - . ID=GCA008085315_00776_gene;locus_tag=GCA008085315_00776 contig_12 Pyrodigal CDS 105983 106588 . - 0 ID=GCA008085315_00776;Name=Chalcone isomerase domain-containing protein;locus_tag=GCA008085315_00776;product=Chalcone isomerase domain-containing protein;Parent=GCA008085315_00776_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005545269.1,SO:0001217,UniParc:UPI0001B9F81E,UniRef:UniRef100_UPI0001B9F81E,UniRef:UniRef50_P44175,UniRef:UniRef90_A0A142FYG0 contig_12 Pyrodigal gene 106692 108086 . - . ID=GCA008085315_00777_gene;locus_tag=GCA008085315_00777;gene=fumC contig_12 Pyrodigal CDS 106692 108086 . - 0 ID=GCA008085315_00777;Name=class II fumarate hydratase;locus_tag=GCA008085315_00777;product=class II fumarate hydratase;Dbxref=GO:0004333,GO:0005737,GO:0006099,GO:0006106,GO:0006108,GO:0045239;gene=fumC;Parent=GCA008085315_00777_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0114,RefSeq:WP_005545267.1,SO:0001217,UniParc:UPI0001B9F81F,UniRef:UniRef100_UPI0001B9F81F,UniRef:UniRef50_P07343,UniRef:UniRef90_Q9CMK1;ec_number=4.2.1.2 contig_12 Pyrodigal gene 108296 108745 . + . ID=GCA008085315_00778_gene;locus_tag=GCA008085315_00778;gene=holC contig_12 Pyrodigal CDS 108296 108745 . + 0 ID=GCA008085315_00778;Name=DNA-directed DNA polymerase III chi subunit;locus_tag=GCA008085315_00778;product=DNA-directed DNA polymerase III chi subunit;gene=holC;Parent=GCA008085315_00778_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2927,COG:L,RefSeq:WP_005545265.1,SO:0001217,UniParc:UPI0000E1B938,UniRef:UniRef100_UPI0000E1B938,UniRef:UniRef50_P43749,UniRef:UniRef90_E6KYR5 contig_12 Pyrodigal gene 109276 109704 . + . ID=GCA008085315_00779_gene;locus_tag=GCA008085315_00779 contig_12 Pyrodigal CDS 109276 109704 . + 0 ID=GCA008085315_00779;Name=DUF2726 domain-containing protein;locus_tag=GCA008085315_00779;product=DUF2726 domain-containing protein;Parent=GCA008085315_00779_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148320732.1,SO:0001217,UniParc:UPI0011D7C706,UniRef:UniRef100_UPI0011D7C706,UniRef:UniRef50_UPI0009B9D535,UniRef:UniRef90_UPI0009B9D535 contig_12 Pyrodigal gene 109788 112652 . + . ID=GCA008085315_00780_gene;locus_tag=GCA008085315_00780;gene=valS contig_12 Pyrodigal CDS 109788 112652 . + 0 ID=GCA008085315_00780;Name=valine--tRNA ligase;locus_tag=GCA008085315_00780;product=valine--tRNA ligase;Dbxref=GO:0000166,GO:0004812,GO:0004832,GO:0005524,GO:0006438;gene=valS;Parent=GCA008085315_00780_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0525,COG:J,KEGG:K01873,RefSeq:WP_005545802.1,SO:0001217,UniParc:UPI0001B9F823,UniRef:UniRef100_UPI0001B9F823,UniRef:UniRef50_P07118,UniRef:UniRef90_A0A5D0EPB5;ec_number=6.1.1.9 contig_12 Pyrodigal gene 112719 113612 . + . ID=GCA008085315_00781_gene;locus_tag=GCA008085315_00781 contig_12 Pyrodigal CDS 112719 113612 . + 0 ID=GCA008085315_00781;Name=hypothetical protein;locus_tag=GCA008085315_00781;product=hypothetical protein;Parent=GCA008085315_00781_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005545804.1,SO:0001217,UniParc:UPI0001B9F824,UniRef:UniRef100_UPI0001B9F824,UniRef:UniRef50_A0A142FYF5,UniRef:UniRef90_A0A142FYF5 contig_12 Pyrodigal gene 113841 114236 . - . ID=GCA008085315_00782_gene;locus_tag=GCA008085315_00782;gene=hipA contig_12 Pyrodigal CDS 113841 114236 . - 0 ID=GCA008085315_00782;Name=HipA N-terminal domain-containing protein;locus_tag=GCA008085315_00782;product=HipA N-terminal domain-containing protein;gene=hipA;Parent=GCA008085315_00782_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3550,COG:T,KEGG:K07154,RefSeq:WP_233439036.1,SO:0001217,UniParc:UPI001F3E82C0,UniRef:UniRef100_UPI001F3E82C0,UniRef:UniRef50_UPI001F3E82C0,UniRef:UniRef90_UPI001F3E82C0;ec_number=2.7.11.1 contig_12 Pyrodigal gene 114236 114517 . - . ID=GCA008085315_00783_gene;locus_tag=GCA008085315_00783 contig_12 Pyrodigal CDS 114236 114517 . - 0 ID=GCA008085315_00783;Name=Helix-turn-helix domain-containing protein;locus_tag=GCA008085315_00783;product=Helix-turn-helix domain-containing protein;Parent=GCA008085315_00783_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005545810.1,SO:0001217,UniParc:UPI0001B9F827,UniRef:UniRef100_UPI0001B9F827,UniRef:UniRef50_Q2C4I3,UniRef:UniRef90_A0A5D0EPG2 contig_12 Pyrodigal gene 114661 116178 . - . ID=GCA008085315_00784_gene;locus_tag=GCA008085315_00784;gene=araJ contig_12 Pyrodigal CDS 114661 116178 . - 0 ID=GCA008085315_00784;Name=MFS transporter;locus_tag=GCA008085315_00784;product=MFS transporter;gene=araJ;Parent=GCA008085315_00784_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2814,COG:G,KEGG:K03446,RefSeq:WP_005545812.1,SO:0001217,UniParc:UPI00022AC2B2,UniRef:UniRef100_UPI00022AC2B2,UniRef:UniRef50_P52600,UniRef:UniRef90_A0A5D0EPB0 contig_12 Pyrodigal gene 116188 117348 . - . ID=GCA008085315_00785_gene;locus_tag=GCA008085315_00785;gene=emrA contig_12 Pyrodigal CDS 116188 117348 . - 0 ID=GCA008085315_00785;Name=Multidrug resistance protein A;locus_tag=GCA008085315_00785;product=Multidrug resistance protein A;gene=emrA;Parent=GCA008085315_00785_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1566,COG:V,KEGG:K03543,RefSeq:WP_005545814.1,SO:0001217,UniParc:UPI00022AC2B1,UniRef:UniRef100_UPI00022AC2B1,UniRef:UniRef50_A0A377IZN3,UniRef:UniRef90_G4AAM1 contig_12 Pyrodigal gene 117557 118039 . + . ID=GCA008085315_00786_gene;locus_tag=GCA008085315_00786;gene=dps contig_12 Pyrodigal CDS 117557 118039 . + 0 ID=GCA008085315_00786;Name=DNA starvation/stationary phase protection protein;locus_tag=GCA008085315_00786;product=DNA starvation/stationary phase protection protein;gene=dps;Parent=GCA008085315_00786_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:B,COG:COG0783,KEGG:K04047,RefSeq:WP_005544145.1,SO:0001217,UniParc:UPI00000B67AA,UniRef:UniRef100_Q8L0S4,UniRef:UniRef50_P45173,UniRef:UniRef90_Q8L0S4 contig_12 Pyrodigal gene 118158 120137 . - . ID=GCA008085315_00787_gene;locus_tag=GCA008085315_00787;gene=rnb contig_12 Pyrodigal CDS 118158 120137 . - 0 ID=GCA008085315_00787;Name=exoribonuclease II;locus_tag=GCA008085315_00787;product=exoribonuclease II;Dbxref=GO:0003723,GO:0006401,GO:0008859;gene=rnb;Parent=GCA008085315_00787_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4776,COG:K,RefSeq:WP_005566761.1,SO:0001217,UniParc:UPI00022AC2AF,UniRef:UniRef100_UPI00022AC2AF,UniRef:UniRef50_P44440,UniRef:UniRef90_A0A5D0EPC4;ec_number=3.1.13.1 contig_12 Pyrodigal gene 120210 120998 . - . ID=GCA008085315_00788_gene;locus_tag=GCA008085315_00788;gene=fabI contig_12 Pyrodigal CDS 120210 120998 . - 0 ID=GCA008085315_00788;Name=Enoyl-[acyl-carrier-protein] reductase [NADH] FabI;locus_tag=GCA008085315_00788;product=Enoyl-[acyl-carrier-protein] reductase [NADH] FabI;Dbxref=GO:0004318,GO:0030497,GO:0042802;gene=fabI;Parent=GCA008085315_00788_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0623,COG:I,RefSeq:WP_005545817.1,SO:0001217,UniParc:UPI0001B9F82C,UniRef:UniRef100_UPI0001B9F82C,UniRef:UniRef50_P44432,UniRef:UniRef90_P44432;ec_number=1.3.1.9 contig_12 Pyrodigal gene 121089 121844 . - . ID=GCA008085315_00789_gene;locus_tag=GCA008085315_00789;gene=nIF3 contig_12 Pyrodigal CDS 121089 121844 . - 0 ID=GCA008085315_00789;Name=Nif3-like dinuclear metal center hexameric protein;locus_tag=GCA008085315_00789;product=Nif3-like dinuclear metal center hexameric protein;Dbxref=GO:0005737,GO:0051540;gene=nIF3;Parent=GCA008085315_00789_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0327,COG:H,RefSeq:WP_005566757.1,SO:0001217,UniParc:UPI00022AC2AE,UniRef:UniRef100_UPI00022AC2AE,UniRef:UniRef50_Q57354,UniRef:UniRef90_G4AAM7 contig_12 Pyrodigal gene 122069 122677 . - . ID=GCA008085315_00790_gene;locus_tag=GCA008085315_00790;gene=queE contig_12 Pyrodigal CDS 122069 122677 . - 0 ID=GCA008085315_00790;Name=7-carboxy-7-deazaguanine synthase;locus_tag=GCA008085315_00790;product=7-carboxy-7-deazaguanine synthase;gene=queE;Parent=GCA008085315_00790_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0602,COG:H,KEGG:K10026,RefSeq:WP_014167720.1,SO:0001217,UniParc:UPI00024348E7,UniRef:UniRef100_UPI0001B9F82E,UniRef:UniRef50_P45097,UniRef:UniRef90_A0A142FYE7;ec_number=4.3.99.3 contig_12 Pyrodigal gene 122704 123129 . - . ID=GCA008085315_00791_gene;locus_tag=GCA008085315_00791;gene=queD contig_12 Pyrodigal CDS 122704 123129 . - 0 ID=GCA008085315_00791;Name=6-carboxytetrahydropterin synthase QueD;locus_tag=GCA008085315_00791;product=6-carboxytetrahydropterin synthase QueD;Dbxref=GO:0003824,GO:0008616;gene=queD;Parent=GCA008085315_00791_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0720,COG:H,KEGG:K01737,RefSeq:WP_005545823.1,SO:0001217,UniParc:UPI0001B9F82F,UniRef:UniRef100_UPI0001B9F82F,UniRef:UniRef50_P44123,UniRef:UniRef90_A0A142FYE6;ec_number=4.2.3.12 contig_12 Infernal regulatory_region 123235 123279 1.9e-05 - . ID=FFLMJBKAJI_99;Name=PreQ1 (pre queuosine) riboswitch aptamer;product=PreQ1 (pre queuosine) riboswitch aptamer;Dbxref=RFAM:RF00522;inference=profile:Rfam:RF00522;Note=SO:0000035;regulatory_class=riboswitch contig_12 Pyrodigal gene 123319 124827 . - . ID=GCA008085315_00792_gene;locus_tag=GCA008085315_00792;gene=lysS contig_12 Pyrodigal CDS 123319 124827 . - 0 ID=GCA008085315_00792;Name=lysine--tRNA ligase;locus_tag=GCA008085315_00792;product=lysine--tRNA ligase;Dbxref=GO:0000049,GO:0000287,GO:0004824,GO:0005524,GO:0005737,GO:0005829,GO:0006430;gene=lysS;Parent=GCA008085315_00792_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1190,COG:J,KEGG:K04567,RefSeq:WP_148320738.1,SO:0001217,UniParc:UPI0011D64C4F,UniRef:UniRef100_UPI0011D64C4F,UniRef:UniRef50_P0A8N5,UniRef:UniRef90_P43825;ec_number=6.1.1.6 contig_12 Pyrodigal gene 124884 125786 . - . ID=GCA008085315_00793_gene;locus_tag=GCA008085315_00793;gene=prfB contig_12 Pyrodigal CDS 124884 125786 . - 0 ID=GCA008085315_00793;Name=peptide chain release factor 2;locus_tag=GCA008085315_00793;product=peptide chain release factor 2;Dbxref=GO:0005737,GO:0006415,GO:0016149,GO:0075523;gene=prfB;Parent=GCA008085315_00793_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1186,COG:J,KEGG:K02836,SO:0001217,UniRef:UniRef50_P57511,UniRef:UniRef90_P43918 contig_12 Pyrodigal gene 126150 126833 . + . ID=GCA008085315_00794_gene;locus_tag=GCA008085315_00794;gene=dsbC contig_12 Pyrodigal CDS 126150 126833 . + 0 ID=GCA008085315_00794;Name=bifunctional protein-disulfide isomerase/oxidoreductase DsbC;locus_tag=GCA008085315_00794;product=bifunctional protein-disulfide isomerase/oxidoreductase DsbC;Dbxref=GO:0042597;gene=dsbC;Parent=GCA008085315_00794_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1651,COG:O,RefSeq:WP_005545830.1,SO:0001217,UniParc:UPI0001B9F833,UniRef:UniRef100_UPI0001B9F833,UniRef:UniRef50_P45111,UniRef:UniRef90_A0A142FXU4;ec_number=5.3.4.1 contig_12 Pyrodigal gene 126846 128567 . + . ID=GCA008085315_00795_gene;locus_tag=GCA008085315_00795;gene=recJ contig_12 Pyrodigal CDS 126846 128567 . + 0 ID=GCA008085315_00795;Name=single-stranded-DNA-specific exonuclease RecJ;locus_tag=GCA008085315_00795;product=single-stranded-DNA-specific exonuclease RecJ;Dbxref=GO:0006281,GO:0006310,GO:0008409;gene=recJ;Parent=GCA008085315_00795_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0608,COG:L,RefSeq:WP_005545832.1,SO:0001217,UniParc:UPI0001B9F834,UniRef:UniRef100_UPI0001B9F834,UniRef:UniRef50_R4YPB7,UniRef:UniRef90_A0A5D0EMN2 contig_12 Pyrodigal gene 128576 129247 . + . ID=GCA008085315_00796_gene;locus_tag=GCA008085315_00796;gene=dsbA contig_12 Pyrodigal CDS 128576 129247 . + 0 ID=GCA008085315_00796;Name=Thiol:disulfide interchange protein DsbA;locus_tag=GCA008085315_00796;product=Thiol:disulfide interchange protein DsbA;gene=dsbA;Parent=GCA008085315_00796_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03673,RefSeq:WP_005545833.1,SO:0001217,UniParc:UPI00022BFC09,UniRef:UniRef100_UPI00022BFC09,UniRef:UniRef50_P44128,UniRef:UniRef90_G4A837;ec_number=1.8.4.15 contig_12 Pyrodigal gene 129264 129956 . + . ID=GCA008085315_00797_gene;locus_tag=GCA008085315_00797;gene=mtnN contig_12 Pyrodigal CDS 129264 129956 . + 0 ID=GCA008085315_00797;Name=5'-methylthioadenosine/adenosylhomocysteine nucleosidase;locus_tag=GCA008085315_00797;product=5'-methylthioadenosine/adenosylhomocysteine nucleosidase;Dbxref=GO:0008782,GO:0008930,GO:0009116,GO:0009164,GO:0019509;gene=mtnN;Parent=GCA008085315_00797_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0775,COG:FH,KEGG:K01243,RefSeq:WP_005545834.1,SO:0001217,UniParc:UPI0001B9F87C,UniRef:UniRef100_UPI0001B9F87C,UniRef:UniRef50_P45113,UniRef:UniRef90_E6KYP0;ec_number=3.2.2.9 contig_12 Pyrodigal gene 130135 130830 . + . ID=GCA008085315_00798_gene;locus_tag=GCA008085315_00798 contig_12 Pyrodigal CDS 130135 130830 . + 0 ID=GCA008085315_00798;Name=DUF4198 domain-containing protein;locus_tag=GCA008085315_00798;product=DUF4198 domain-containing protein;Parent=GCA008085315_00798_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5266,COG:R,RefSeq:WP_005538320.1,SO:0001217,UniParc:UPI0001B9F87D,UniRef:UniRef100_A0A142FXU0,UniRef:UniRef50_P44276,UniRef:UniRef90_A0A142FXU0 contig_12 Pyrodigal gene 130837 131340 . + . ID=GCA008085315_00799_gene;locus_tag=GCA008085315_00799 contig_12 Pyrodigal CDS 130837 131340 . + 0 ID=GCA008085315_00799;Name=Carboxypeptidase regulatory-like domain-containing protein;locus_tag=GCA008085315_00799;product=Carboxypeptidase regulatory-like domain-containing protein;Parent=GCA008085315_00799_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005566749.1,SO:0001217,UniParc:UPI00022AC2A8,UniRef:UniRef100_UPI00022AC2A8,UniRef:UniRef50_P44275,UniRef:UniRef90_A0A142FXT9 contig_12 Pyrodigal gene 131340 131993 . + . ID=GCA008085315_00800_gene;locus_tag=GCA008085315_00800;gene=cbiM contig_12 Pyrodigal CDS 131340 131993 . + 0 ID=GCA008085315_00800;Name=cobalt transporter CbiM;locus_tag=GCA008085315_00800;product=cobalt transporter CbiM;gene=cbiM;Parent=GCA008085315_00800_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0310,COG:P,KEGG:K02007,RefSeq:WP_005545836.1,SO:0001217,UniParc:UPI0001B9F87F,UniRef:UniRef100_UPI0001B9F87F,UniRef:UniRef50_P44274,UniRef:UniRef90_A0A142FXT8 contig_12 Pyrodigal gene 131990 132655 . + . ID=GCA008085315_00801_gene;locus_tag=GCA008085315_00801;gene=ecfT contig_12 Pyrodigal CDS 131990 132655 . + 0 ID=GCA008085315_00801;Name=ABC transporter permease;locus_tag=GCA008085315_00801;product=ABC transporter permease;gene=ecfT;Parent=GCA008085315_00801_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0619,COG:H,RefSeq:WP_005566748.1,SO:0001217,UniParc:UPI00022AC2A7,UniRef:UniRef100_UPI00022AC2A7,UniRef:UniRef50_E6KYN6,UniRef:UniRef90_A0A142FXT7 contig_12 Pyrodigal gene 132652 133275 . + . ID=GCA008085315_00802_gene;locus_tag=GCA008085315_00802 contig_12 Pyrodigal CDS 132652 133275 . + 0 ID=GCA008085315_00802;Name=Cobalt ABC superfamily ATP binding cassette transporter%2C ABC protein;locus_tag=GCA008085315_00802;product=Cobalt ABC superfamily ATP binding cassette transporter%2C ABC protein;Parent=GCA008085315_00802_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005566747.1,SO:0001217,UniParc:UPI00022AC2A6,UniRef:UniRef100_UPI00022AC2A6,UniRef:UniRef50_P45275,UniRef:UniRef90_E6KYN5 contig_12 Pyrodigal gene 133354 134163 . + . ID=GCA008085315_00803_gene;locus_tag=GCA008085315_00803;gene=hypB contig_12 Pyrodigal CDS 133354 134163 . + 0 ID=GCA008085315_00803;Name=hydrogenase nickel incorporation protein HypB;locus_tag=GCA008085315_00803;product=hydrogenase nickel incorporation protein HypB;Dbxref=GO:0003924,GO:0016151,GO:0051604;gene=hypB;Parent=GCA008085315_00803_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0378,COG:O,KEGG:K04652,RefSeq:WP_005545839.1,SO:0001217,UniParc:UPI0001B9F882,UniRef:UniRef100_UPI0001B9F882,UniRef:UniRef50_G0JKV8,UniRef:UniRef90_E6KYN4;ec_number=3.6.5.- contig_12 Pyrodigal gene 134190 135302 . + . ID=GCA008085315_00804_gene;locus_tag=GCA008085315_00804;gene=hypD contig_12 Pyrodigal CDS 134190 135302 . + 0 ID=GCA008085315_00804;Name=hydrogenase formation protein HypD;locus_tag=GCA008085315_00804;product=hydrogenase formation protein HypD;Dbxref=GO:0016530,GO:0036211;gene=hypD;Parent=GCA008085315_00804_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0409,COG:O,KEGG:K04654,RefSeq:WP_025298320.1,SO:0001217,UniParc:UPI0004375609,UniRef:UniRef100_UPI0004375609,UniRef:UniRef50_A0A6L5Z5E1,UniRef:UniRef90_E6KYN3 contig_12 Pyrodigal gene 135302 136315 . + . ID=GCA008085315_00805_gene;locus_tag=GCA008085315_00805;gene=hypE contig_12 Pyrodigal CDS 135302 136315 . + 0 ID=GCA008085315_00805;Name=hydrogenase expression/formation protein HypE;locus_tag=GCA008085315_00805;product=hydrogenase expression/formation protein HypE;gene=hypE;Parent=GCA008085315_00805_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0309,COG:O,KEGG:K04655,RefSeq:WP_005573702.1,SO:0001217,UniParc:UPI0001B9F884,UniRef:UniRef100_UPI0001B9F884,UniRef:UniRef50_A0A379B2V0,UniRef:UniRef90_E6KYN2 contig_12 Pyrodigal gene 136723 137118 . + . ID=GCA008085315_00806_gene;locus_tag=GCA008085315_00806 contig_12 Pyrodigal CDS 136723 137118 . + 0 ID=GCA008085315_00806;Name=Lipoprotein;locus_tag=GCA008085315_00806;product=Lipoprotein;Parent=GCA008085315_00806_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A9X0ZW59,UniRef:UniRef90_UPI00022AC64C contig_12 Pyrodigal gene 137545 138132 . - . ID=GCA008085315_00807_gene;locus_tag=GCA008085315_00807 contig_12 Pyrodigal CDS 137545 138132 . - 0 ID=GCA008085315_00807;Name=hypothetical protein;locus_tag=GCA008085315_00807;product=hypothetical protein;Parent=GCA008085315_00807_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005570874.1,SO:0001217,UniParc:UPI00022AC64E,UniRef:UniRef100_UPI00022AC64E,UniRef:UniRef50_A0A8B2U7T1,UniRef:UniRef90_UPI00036CA799 contig_12 Pyrodigal gene 138281 139096 . - . ID=GCA008085315_00808_gene;locus_tag=GCA008085315_00808;gene=aroE contig_12 Pyrodigal CDS 138281 139096 . - 0 ID=GCA008085315_00808;Name=shikimate 5-dehydrogenase;locus_tag=GCA008085315_00808;product=shikimate 5-dehydrogenase;Dbxref=GO:0004764;gene=aroE;Parent=GCA008085315_00808_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0169,COG:E,RefSeq:WP_005545842.1,SO:0001217,UniParc:UPI0001B9F886,UniRef:UniRef100_UPI0001B9F886,UniRef:UniRef50_P44774,UniRef:UniRef90_A0A142FXS7 contig_12 Pyrodigal gene 139246 140130 . - . ID=GCA008085315_00809_gene;locus_tag=GCA008085315_00809;gene=metF contig_12 Pyrodigal CDS 139246 140130 . - 0 ID=GCA008085315_00809;Name=methylenetetrahydrofolate reductase;locus_tag=GCA008085315_00809;product=methylenetetrahydrofolate reductase;Dbxref=GO:0004489,GO:0009086;gene=metF;Parent=GCA008085315_00809_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0685,COG:E,RefSeq:WP_005589001.1,SO:0001217,UniParc:UPI0002ACA062,UniRef:UniRef100_UPI0002ACA062,UniRef:UniRef50_P0AEZ1,UniRef:UniRef90_A0A5D0EMP6;ec_number=1.5.1.20 contig_12 Pyrodigal gene 140305 141372 . - . ID=GCA008085315_00810_gene;locus_tag=GCA008085315_00810;gene=lptG contig_12 Pyrodigal CDS 140305 141372 . - 0 ID=GCA008085315_00810;Name=LPS export ABC transporter permease LptG;locus_tag=GCA008085315_00810;product=LPS export ABC transporter permease LptG;Dbxref=GO:0015221,GO:0043190,GO:0055085;gene=lptG;Parent=GCA008085315_00810_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0795,COG:MN,RefSeq:WP_005545844.1,SO:0001217,UniParc:UPI0001B9F888,UniRef:UniRef100_UPI0001B9F888,UniRef:UniRef50_P0ADC6,UniRef:UniRef90_A0A5D0EMQ3;ec_number=7.5.2.5 contig_12 Pyrodigal gene 141377 142495 . - . ID=GCA008085315_00811_gene;locus_tag=GCA008085315_00811;gene=lptF contig_12 Pyrodigal CDS 141377 142495 . - 0 ID=GCA008085315_00811;Name=LPS export ABC transporter permease LptF;locus_tag=GCA008085315_00811;product=LPS export ABC transporter permease LptF;Dbxref=GO:0015221,GO:0043190,GO:0055085;gene=lptF;Parent=GCA008085315_00811_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0795,COG:MN,SO:0001217,UniRef:UniRef50_P45333,UniRef:UniRef90_G4A851;ec_number=7.5.2.5 contig_12 Pyrodigal gene 142632 144122 . + . ID=GCA008085315_00812_gene;locus_tag=GCA008085315_00812;gene=pepB contig_12 Pyrodigal CDS 142632 144122 . + 0 ID=GCA008085315_00812;Name=leucyl aminopeptidase;locus_tag=GCA008085315_00812;product=leucyl aminopeptidase;Dbxref=GO:0019538,GO:0070006;gene=pepB;Parent=GCA008085315_00812_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0260,COG:E,RefSeq:WP_014167722.1,SO:0001217,UniParc:UPI00022C006B,UniRef:UniRef100_UPI00022C006B,UniRef:UniRef50_P68767,UniRef:UniRef90_A0A142FXS3;ec_number=3.4.11.1 contig_12 Pyrodigal gene 144267 145328 . - . ID=GCA008085315_00813_gene;locus_tag=GCA008085315_00813;gene=modC contig_12 Pyrodigal CDS 144267 145328 . - 0 ID=GCA008085315_00813;Name=molybdenum ABC transporter ATP-binding protein ModC;locus_tag=GCA008085315_00813;product=molybdenum ABC transporter ATP-binding protein ModC;Dbxref=GO:0005524,GO:0015098,GO:0015689,GO:0016020;gene=modC;Parent=GCA008085315_00813_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4148,COG:P,RefSeq:WP_005545847.1,SO:0001217,UniParc:UPI0001B9F88B,UniRef:UniRef100_UPI0001B9F88B,UniRef:UniRef50_P09833,UniRef:UniRef90_A0A5D0EMZ4;ec_number=7.3.2.5 contig_12 Pyrodigal gene 145315 146043 . - . ID=GCA008085315_00814_gene;locus_tag=GCA008085315_00814;gene=modB contig_12 Pyrodigal CDS 145315 146043 . - 0 ID=GCA008085315_00814;Name=molybdate ABC transporter permease subunit;locus_tag=GCA008085315_00814;product=molybdate ABC transporter permease subunit;Dbxref=GO:0015098,GO:0015689,GO:0016020;gene=modB;Parent=GCA008085315_00814_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4149,COG:P,RefSeq:WP_148333956.1,SO:0001217,UniParc:UPI0011DB0F95,UniRef:UniRef100_UPI0011DB0F95,UniRef:UniRef50_P0AF01,UniRef:UniRef90_A0A5D0EMQ7;ec_number=7.3.2.- contig_12 Pyrodigal gene 146122 146886 . - . ID=GCA008085315_00815_gene;locus_tag=GCA008085315_00815;gene=modA contig_12 Pyrodigal CDS 146122 146886 . - 0 ID=GCA008085315_00815;Name=molybdate ABC transporter substrate-binding protein;locus_tag=GCA008085315_00815;product=molybdate ABC transporter substrate-binding protein;Dbxref=GO:0015689;gene=modA;Parent=GCA008085315_00815_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0725,COG:P,RefSeq:WP_005566733.1,SO:0001217,UniParc:UPI00022AC0E1,UniRef:UniRef100_UPI00022AC0E1,UniRef:UniRef50_P45323,UniRef:UniRef90_E6KY35;ec_number=7.3.2.- contig_12 Pyrodigal gene 147113 147892 . + . ID=GCA008085315_00816_gene;locus_tag=GCA008085315_00816;gene=mopI contig_12 Pyrodigal CDS 147113 147892 . + 0 ID=GCA008085315_00816;Name=Transcriptional regulator;locus_tag=GCA008085315_00816;product=Transcriptional regulator;gene=mopI;Parent=GCA008085315_00816_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3585,COG:H,KEGG:K02019,RefSeq:WP_005538269.1,SO:0001217,UniParc:UPI0001B9F88E,UniRef:UniRef100_A0A142FXR9,UniRef:UniRef50_P45324,UniRef:UniRef90_A0A142FXR9 contig_12 Pyrodigal gene 148059 149456 . + . ID=GCA008085315_00817_gene;locus_tag=GCA008085315_00817;gene=citT contig_12 Pyrodigal CDS 148059 149456 . + 0 ID=GCA008085315_00817;Name=DASS family sodium-coupled anion symporter;locus_tag=GCA008085315_00817;product=DASS family sodium-coupled anion symporter;gene=citT;Parent=GCA008085315_00817_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0471,COG:G,SO:0001217,UniRef:UniRef50_Q9CLQ0,UniRef:UniRef90_A0A5D0EN64 contig_12 Pyrodigal gene 149523 150119 . - . ID=GCA008085315_00818_gene;locus_tag=GCA008085315_00818;gene=yfbR contig_12 Pyrodigal CDS 149523 150119 . - 0 ID=GCA008085315_00818;Name=5'-deoxynucleotidase;locus_tag=GCA008085315_00818;product=5'-deoxynucleotidase;Dbxref=GO:0002953;gene=yfbR;Parent=GCA008085315_00818_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1896,COG:FR,KEGG:K08722,RefSeq:WP_005545851.1,SO:0001217,UniParc:UPI0001B9F890,UniRef:UniRef100_UPI0001B9F890,UniRef:UniRef50_Q87R72,UniRef:UniRef90_A0A336N1Z1;ec_number=3.1.3.89 contig_12 Pyrodigal gene 150128 151156 . - . ID=GCA008085315_00819_gene;locus_tag=GCA008085315_00819;gene=degS contig_12 Pyrodigal CDS 150128 151156 . - 0 ID=GCA008085315_00819;Name=outer membrane-stress sensor serine endopeptidase DegS;locus_tag=GCA008085315_00819;product=outer membrane-stress sensor serine endopeptidase DegS;Dbxref=GO:0008236,GO:0030288,GO:0045152;gene=degS;Parent=GCA008085315_00819_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0265,COG:O,RefSeq:WP_005538261.1,SO:0001217,UniParc:UPI0001B9F891,UniRef:UniRef100_A0A142FXR6,UniRef:UniRef50_P44947,UniRef:UniRef90_A0A142FXR6;ec_number=3.4.21.107 contig_12 Pyrodigal gene 151165 152289 . - . ID=GCA008085315_00820_gene;locus_tag=GCA008085315_00820;gene=ribD contig_12 Pyrodigal CDS 151165 152289 . - 0 ID=GCA008085315_00820;Name=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;locus_tag=GCA008085315_00820;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;Dbxref=GO:0008270,GO:0008703,GO:0008835,GO:0050661;gene=ribD;Parent=GCA008085315_00820_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1985,COG:H,KEGG:K11752,RefSeq:WP_005545852.1,SO:0001217,UniParc:UPI0001B9F892,UniRef:UniRef100_UPI0001B9F892,UniRef:UniRef50_P25539,UniRef:UniRef90_A0A5D0EMQ4;ec_number=3.5.4.26 contig_12 Pyrodigal gene 152289 152741 . - . ID=GCA008085315_00821_gene;locus_tag=GCA008085315_00821;gene=nrdR contig_12 Pyrodigal CDS 152289 152741 . - 0 ID=GCA008085315_00821;Name=transcriptional regulator NrdR;locus_tag=GCA008085315_00821;product=transcriptional regulator NrdR;Dbxref=GO:0006355,GO:0008270,GO:0140110;gene=nrdR;Parent=GCA008085315_00821_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1327,COG:K,RefSeq:WP_005538258.1,SO:0001217,UniParc:UPI0001B9F893,UniRef:UniRef100_A0A142FXR4,UniRef:UniRef50_Q7MN57,UniRef:UniRef90_E6KY40 contig_12 Pyrodigal gene 152858 153946 . - . ID=GCA008085315_00822_gene;locus_tag=GCA008085315_00822;gene=rlmM contig_12 Pyrodigal CDS 152858 153946 . - 0 ID=GCA008085315_00822;Name=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;locus_tag=GCA008085315_00822;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;Dbxref=GO:0008168;gene=rlmM;Parent=GCA008085315_00822_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2933,COG:J,KEGG:K06968,RefSeq:WP_148333957.1,SO:0001217,UniParc:UPI0011DC645D,UniRef:UniRef100_UPI0011DC645D,UniRef:UniRef50_P0ADR6,UniRef:UniRef90_A0A142FXR3;ec_number=2.1.1.186 contig_12 Pyrodigal gene 153939 154844 . - . ID=GCA008085315_00823_gene;locus_tag=GCA008085315_00823;gene=lysR contig_12 Pyrodigal CDS 153939 154844 . - 0 ID=GCA008085315_00823;Name=Glycine cleavage system transcriptional activator;locus_tag=GCA008085315_00823;product=Glycine cleavage system transcriptional activator;gene=lysR;Parent=GCA008085315_00823_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0583,COG:K,KEGG:K03566,RefSeq:WP_148320747.1,SO:0001217,UniParc:UPI0011DA9626,UniRef:UniRef100_UPI0011DA9626,UniRef:UniRef50_P45099,UniRef:UniRef90_E6KY42 contig_12 Infernal gene 154952 155129 . + . ID=GCA008085315_00824_gene;locus_tag=GCA008085315_00824;gene=gcvB contig_12 Infernal ncRNA 154952 155129 1.7e-10 + . ID=GCA008085315_00824;Name=GcvB RNA;locus_tag=GCA008085315_00824;gene=gcvB;product=GcvB RNA;Dbxref=RFAM:RF00022;Parent=GCA008085315_00824_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00022 contig_12 Pyrodigal gene 155306 156325 . + . ID=GCA008085315_00825_gene;locus_tag=GCA008085315_00825;gene=ilvE contig_12 Pyrodigal CDS 155306 156325 . + 0 ID=GCA008085315_00825;Name=branched-chain amino acid aminotransferase;locus_tag=GCA008085315_00825;product=branched-chain amino acid aminotransferase;Dbxref=GO:0004084,GO:0009081;gene=ilvE;Parent=GCA008085315_00825_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0115,COG:EH,KEGG:K00826,RefSeq:WP_005545854.1,SO:0001217,UniParc:UPI0001B9F896,UniRef:UniRef100_UPI0001B9F896,UniRef:UniRef50_O26004,UniRef:UniRef90_E6KY43;ec_number=2.6.1.42 contig_12 Pyrodigal gene 156693 157433 . + . ID=GCA008085315_00826_gene;locus_tag=GCA008085315_00826 contig_12 Pyrodigal CDS 156693 157433 . + 0 ID=GCA008085315_00826;Name=Orf14 protein;locus_tag=GCA008085315_00826;product=Orf14 protein;Parent=GCA008085315_00826_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148333958.1,SO:0001217,UniParc:UPI0011D59EAE,UniRef:UniRef100_UPI0011D59EAE,UniRef:UniRef50_Q9JRR1,UniRef:UniRef90_A0A5D0EMR0 contig_12 Pyrodigal gene 157589 158524 . - . ID=GCA008085315_00827_gene;locus_tag=GCA008085315_00827;gene=mdh contig_12 Pyrodigal CDS 157589 158524 . - 0 ID=GCA008085315_00827;Name=malate dehydrogenase;locus_tag=GCA008085315_00827;product=malate dehydrogenase;Dbxref=GO:0005737,GO:0006099,GO:0006108,GO:0030060;gene=mdh;Parent=GCA008085315_00827_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0039,RefSeq:WP_005566727.1,SO:0001217,UniParc:UPI0001B9F898,UniRef:UniRef100_UPI0001B9F898,UniRef:UniRef50_P61889,UniRef:UniRef90_P44427;ec_number=1.1.1.37 contig_12 Pyrodigal gene 158790 159257 . + . ID=GCA008085315_00828_gene;locus_tag=GCA008085315_00828;gene=argR contig_12 Pyrodigal CDS 158790 159257 . + 0 ID=GCA008085315_00828;Name=transcriptional regulator ArgR;locus_tag=GCA008085315_00828;product=transcriptional regulator ArgR;gene=argR;Parent=GCA008085315_00828_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1438,COG:K,KEGG:K03402,RefSeq:WP_005545859.1,SO:0001217,UniParc:UPI0001B9F899,UniRef:UniRef100_UPI0001B9F899,UniRef:UniRef50_P45110,UniRef:UniRef90_A0A142FXQ8 contig_12 Pyrodigal gene 159281 160168 . + . ID=GCA008085315_00829_gene;locus_tag=GCA008085315_00829;gene=yfcH contig_12 Pyrodigal CDS 159281 160168 . + 0 ID=GCA008085315_00829;Name=Epimerase;locus_tag=GCA008085315_00829;product=Epimerase;gene=yfcH;Parent=GCA008085315_00829_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1090,COG:R,KEGG:K07071,RefSeq:WP_005566725.1,SO:0001217,UniParc:UPI0001B9F89A,UniRef:UniRef100_UPI0001B9F89A,UniRef:UniRef50_A0A380TZ41,UniRef:UniRef90_A0A142FXQ7 contig_12 Pyrodigal gene 160359 160940 . + . ID=GCA008085315_00830_gene;locus_tag=GCA008085315_00830;gene=rsxA contig_12 Pyrodigal CDS 160359 160940 . + 0 ID=GCA008085315_00830;Name=electron transport complex subunit RsxA;locus_tag=GCA008085315_00830;product=electron transport complex subunit RsxA;Dbxref=GO:0005886,GO:0016020,GO:0022900;gene=rsxA;Parent=GCA008085315_00830_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG4657,KEGG:K03617,RefSeq:WP_005538237.1,SO:0001217,UniParc:UPI0001B9F89B,UniRef:UniRef100_A0A142FXQ6,UniRef:UniRef50_P0A766,UniRef:UniRef90_P71395;ec_number=7.-.-.- contig_12 Pyrodigal gene 160940 161530 . + . ID=GCA008085315_00831_gene;locus_tag=GCA008085315_00831;gene=rsxB contig_12 Pyrodigal CDS 160940 161530 . + 0 ID=GCA008085315_00831;Name=electron transport complex subunit RsxB;locus_tag=GCA008085315_00831;product=electron transport complex subunit RsxB;Dbxref=GO:0009055,GO:0022900,GO:0051536;gene=rsxB;Parent=GCA008085315_00831_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG2878,RefSeq:WP_005585539.1,SO:0001217,UniParc:UPI0001B9F89C,UniRef:UniRef100_UPI0001B9F89C,UniRef:UniRef50_P71396,UniRef:UniRef90_A0A142FXQ5 contig_12 Pyrodigal gene 161531 163627 . + . ID=GCA008085315_00832_gene;locus_tag=GCA008085315_00832;gene=rsxC contig_12 Pyrodigal CDS 161531 163627 . + 0 ID=GCA008085315_00832;Name=electron transport complex subunit RsxC;locus_tag=GCA008085315_00832;product=electron transport complex subunit RsxC;Dbxref=GO:0009055,GO:0016020,GO:0051539;gene=rsxC;Parent=GCA008085315_00832_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148320749.1,SO:0001217,UniParc:UPI0011D43C70,UniRef:UniRef100_UPI0011D43C70,UniRef:UniRef50_A8A0H2,UniRef:UniRef90_A0A5D0EMS7 contig_12 Pyrodigal gene 163638 164717 . + . ID=GCA008085315_00833_gene;locus_tag=GCA008085315_00833;gene=rsxD contig_12 Pyrodigal CDS 163638 164717 . + 0 ID=GCA008085315_00833;Name=electron transport complex subunit RsxD;locus_tag=GCA008085315_00833;product=electron transport complex subunit RsxD;Dbxref=GO:0016020,GO:0022900,GO:0055085;gene=rsxD;Parent=GCA008085315_00833_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG4658,RefSeq:WP_005545871.1,SO:0001217,UniParc:UPI0001B9F89E,UniRef:UniRef100_UPI0001B9F89E,UniRef:UniRef50_P76182,UniRef:UniRef90_A0A5D0EMR5 contig_12 Pyrodigal gene 164724 165344 . + . ID=GCA008085315_00834_gene;locus_tag=GCA008085315_00834;gene=rsxG contig_12 Pyrodigal CDS 164724 165344 . + 0 ID=GCA008085315_00834;Name=electron transport complex subunit RsxG;locus_tag=GCA008085315_00834;product=electron transport complex subunit RsxG;Dbxref=GO:0009055,GO:0010181,GO:0016020,GO:0022900;gene=rsxG;Parent=GCA008085315_00834_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG4659,RefSeq:WP_005544008.1,SO:0001217,UniParc:UPI0001B9F89F,UniRef:UniRef100_A0A5D0KLP0,UniRef:UniRef50_P44291,UniRef:UniRef90_A0A5D0KLP0 contig_12 Pyrodigal gene 165337 166122 . + . ID=GCA008085315_00835_gene;locus_tag=GCA008085315_00835;gene=rnfE contig_12 Pyrodigal CDS 165337 166122 . + 0 ID=GCA008085315_00835;Name=Ion-translocating oxidoreductase complex subunit E;locus_tag=GCA008085315_00835;product=Ion-translocating oxidoreductase complex subunit E;gene=rnfE;Parent=GCA008085315_00835_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG4660,RefSeq:WP_005544007.1,SO:0001217,UniParc:UPI0000E1B90C,UniRef:UniRef100_A0A142FXQ1,UniRef:UniRef50_A5F2S7,UniRef:UniRef90_A0A142FXQ1 contig_12 Infernal gene 165386 165487 . + . ID=GCA008085315_00836_gene;locus_tag=GCA008085315_00836;gene=AaHKsRNA22 contig_12 Infernal ncRNA 165386 165487 9e-12 + . ID=GCA008085315_00836;Name=Aggregatibacter sRNA 22;locus_tag=GCA008085315_00836;product=Aggregatibacter sRNA 22;Dbxref=RFAM:RF02902;Parent=GCA008085315_00836_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02902 contig_12 Pyrodigal gene 166269 166904 . + . ID=GCA008085315_00837_gene;locus_tag=GCA008085315_00837;gene=nth contig_12 Pyrodigal CDS 166269 166904 . + 0 ID=GCA008085315_00837;Name=endonuclease III;locus_tag=GCA008085315_00837;product=endonuclease III;Dbxref=GO:0003906,GO:0006284;gene=nth;Parent=GCA008085315_00837_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0177,COG:L,RefSeq:WP_005544001.1,SO:0001217,UniParc:UPI00022ABC9F,UniRef:UniRef100_A0A5D0KPW3,UniRef:UniRef50_P44319,UniRef:UniRef90_A0AAE6JQK8;ec_number=4.2.99.18 contig_12 Pyrodigal gene 166929 168296 . + . ID=GCA008085315_00838_gene;locus_tag=GCA008085315_00838;gene=yocR contig_12 Pyrodigal CDS 166929 168296 . + 0 ID=GCA008085315_00838;Name=putative sodium-dependent transporter HI_1690;locus_tag=GCA008085315_00838;product=putative sodium-dependent transporter HI_1690;Dbxref=GO:0005886,GO:0015293;gene=yocR;Parent=GCA008085315_00838_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0733,COG:R,RefSeq:WP_005545874.1,SO:0001217,UniParc:UPI0001B9F8A1,UniRef:UniRef100_UPI0001B9F8A1,UniRef:UniRef50_P45320,UniRef:UniRef90_P45320 contig_12 Pyrodigal gene 168691 169476 . - . ID=GCA008085315_00839_gene;locus_tag=GCA008085315_00839;gene=znuB contig_12 Pyrodigal CDS 168691 169476 . - 0 ID=GCA008085315_00839;Name=zinc ABC transporter permease subunit ZnuB;locus_tag=GCA008085315_00839;product=zinc ABC transporter permease subunit ZnuB;Dbxref=GO:0042626,GO:0055085;gene=znuB;Parent=GCA008085315_00839_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1108,COG:P,RefSeq:WP_005545876.1,SO:0001217,UniParc:UPI0001B9F0E9,UniRef:UniRef100_UPI0001B9F0E9,UniRef:UniRef50_P39832,UniRef:UniRef90_A0A5D0EMS4;ec_number=7.2.2.- contig_12 Pyrodigal gene 169488 170261 . - . ID=GCA008085315_00840_gene;locus_tag=GCA008085315_00840;gene=znuC contig_12 Pyrodigal CDS 169488 170261 . - 0 ID=GCA008085315_00840;Name=zinc ABC transporter ATP-binding protein ZnuC;locus_tag=GCA008085315_00840;product=zinc ABC transporter ATP-binding protein ZnuC;Dbxref=GO:0005524,GO:0006829,GO:0015633;gene=znuC;Parent=GCA008085315_00840_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1121,COG:P,RefSeq:WP_005545878.1,SO:0001217,UniParc:UPI0001B9F0EA,UniRef:UniRef100_UPI0001B9F0EA,UniRef:UniRef50_Q65UG3,UniRef:UniRef90_A0A5D0EMS2;ec_number=7.2.2.- contig_12 Pyrodigal gene 170450 171982 . + . ID=GCA008085315_00841_gene;locus_tag=GCA008085315_00841;gene=mepM contig_12 Pyrodigal CDS 170450 171982 . + 0 ID=GCA008085315_00841;Name=murein DD-endopeptidase MepM;locus_tag=GCA008085315_00841;product=murein DD-endopeptidase MepM;Dbxref=GO:0042834;gene=mepM;Parent=GCA008085315_00841_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0739,COG:M,RefSeq:WP_012820973.1,SO:0001217,UniParc:UPI0001B9F0EB,UniRef:UniRef100_UPI0001B9F0EB,UniRef:UniRef50_A0A3S4Y0M1,UniRef:UniRef90_A0A5D0EMS0;ec_number=3.4.24.- contig_12 Pyrodigal gene 172090 172848 . - . ID=GCA008085315_00842_gene;locus_tag=GCA008085315_00842;gene=ceuD contig_12 Pyrodigal CDS 172090 172848 . - 0 ID=GCA008085315_00842;Name=ATP-binding cassette domain-containing protein;locus_tag=GCA008085315_00842;product=ATP-binding cassette domain-containing protein;gene=ceuD;Parent=GCA008085315_00842_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4604,COG:P,RefSeq:WP_005545882.1,SO:0001217,UniParc:UPI0001B9F0EC,UniRef:UniRef100_UPI0001B9F0EC,UniRef:UniRef50_A0A378MRB7,UniRef:UniRef90_A0A142FXP5 contig_12 Pyrodigal gene 172860 173801 . - . ID=GCA008085315_00843_gene;locus_tag=GCA008085315_00843;gene=ceuC contig_12 Pyrodigal CDS 172860 173801 . - 0 ID=GCA008085315_00843;Name=Iron chelate ABC superfamily ATP binding cassette transporter%2C membrane protein;locus_tag=GCA008085315_00843;product=Iron chelate ABC superfamily ATP binding cassette transporter%2C membrane protein;gene=ceuC;Parent=GCA008085315_00843_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4605,COG:P,RefSeq:WP_005545884.1,SO:0001217,UniParc:UPI00022BFC7C,UniRef:UniRef100_UPI00022BFC7C,UniRef:UniRef50_A0A1R4GPD0,UniRef:UniRef90_E6KYL9 contig_12 Pyrodigal gene 173791 174756 . - . ID=GCA008085315_00844_gene;locus_tag=GCA008085315_00844;gene=ceuB contig_12 Pyrodigal CDS 173791 174756 . - 0 ID=GCA008085315_00844;Name=Iron ABC transporter permease;locus_tag=GCA008085315_00844;product=Iron ABC transporter permease;gene=ceuB;Parent=GCA008085315_00844_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4606,COG:P,RefSeq:WP_005545887.1,SO:0001217,UniParc:UPI0001B9F0EE,UniRef:UniRef100_UPI0001B9F0EE,UniRef:UniRef50_A0A1R4ED15,UniRef:UniRef90_A0A142FXP3 contig_12 Pyrodigal gene 174816 175715 . - . ID=GCA008085315_00845_gene;locus_tag=GCA008085315_00845;gene=ceuA contig_12 Pyrodigal CDS 174816 175715 . - 0 ID=GCA008085315_00845;Name=Enterochelin ABC transporter substrate-binding protein;locus_tag=GCA008085315_00845;product=Enterochelin ABC transporter substrate-binding protein;gene=ceuA;Parent=GCA008085315_00845_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4607,COG:P,RefSeq:WP_005545889.1,SO:0001217,UniParc:UPI0001B9F0EF,UniRef:UniRef100_UPI0001B9F0EF,UniRef:UniRef50_W0Q7Y4,UniRef:UniRef90_A0A5D0EN21 contig_12 Pyrodigal gene 175944 177920 . + . ID=GCA008085315_00846_gene;locus_tag=GCA008085315_00846;gene=cpdB contig_12 Pyrodigal CDS 175944 177920 . + 0 ID=GCA008085315_00846;Name=2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase;locus_tag=GCA008085315_00846;product=2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase;Dbxref=GO:0008663,GO:0009117;gene=cpdB;Parent=GCA008085315_00846_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0737,COG:FV,RefSeq:WP_005575131.1,SO:0001217,UniParc:UPI00022AD36C,UniRef:UniRef100_UPI00022AD36C,UniRef:UniRef50_P08331,UniRef:UniRef90_A0A5D0EMT5;ec_number=3.1.4.16 contig_12 Pyrodigal gene 177994 178911 . - . ID=GCA008085315_00847_gene;locus_tag=GCA008085315_00847;gene=fdhE contig_12 Pyrodigal CDS 177994 178911 . - 0 ID=GCA008085315_00847;Name=formate dehydrogenase accessory protein FdhE;locus_tag=GCA008085315_00847;product=formate dehydrogenase accessory protein FdhE;gene=fdhE;Parent=GCA008085315_00847_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CO,COG:COG3058,KEGG:K02380,RefSeq:WP_148320751.1,SO:0001217,UniParc:UPI0011D7E4CE,UniRef:UniRef100_UPI0011D7E4CE,UniRef:UniRef50_P44452,UniRef:UniRef90_A0A5D0EMS8 contig_12 Pyrodigal gene 179025 179159 . - . ID=GCA008085315_00848_gene;locus_tag=GCA008085315_00848 contig_12 Pyrodigal CDS 179025 179159 . - 0 ID=GCA008085315_00848;Name=hypothetical protein;locus_tag=GCA008085315_00848;product=hypothetical protein;Parent=GCA008085315_00848_gene;inference=ab initio prediction:Pyrodigal:3.5 contig_12 Pyrodigal gene 179283 179699 . + . ID=GCA008085315_00849_gene;locus_tag=GCA008085315_00849;gene=ydeI contig_12 Pyrodigal CDS 179283 179699 . + 0 ID=GCA008085315_00849;Name=Protein YgiW;locus_tag=GCA008085315_00849;product=Protein YgiW;gene=ydeI;Parent=GCA008085315_00849_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3111,COG:S,RefSeq:WP_005545895.1,SO:0001217,UniParc:UPI0001B9F0F3,UniRef:UniRef100_UPI0001B9F0F3,UniRef:UniRef50_A0A9X4PEL7,UniRef:UniRef90_G4A887 contig_12 Pyrodigal gene 179837 180508 . + . ID=GCA008085315_00850_gene;locus_tag=GCA008085315_00850 contig_12 Pyrodigal CDS 179837 180508 . + 0 ID=GCA008085315_00850;Name=Two component response regulator;locus_tag=GCA008085315_00850;product=Two component response regulator;Parent=GCA008085315_00850_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005545897.1,SO:0001217,UniParc:UPI0001B9F0F4,UniRef:UniRef100_UPI0001B9F0F4,UniRef:UniRef50_P52076,UniRef:UniRef90_E6KYL1 contig_12 Pyrodigal gene 180477 181871 . + . ID=GCA008085315_00851_gene;locus_tag=GCA008085315_00851;gene=qseC contig_12 Pyrodigal CDS 180477 181871 . + 0 ID=GCA008085315_00851;Name=quorum sensing histidine kinase QseC;locus_tag=GCA008085315_00851;product=quorum sensing histidine kinase QseC;Dbxref=GO:0000155,GO:0007165;gene=qseC;Parent=GCA008085315_00851_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0642,COG:T,RefSeq:WP_005567411.1,SO:0001217,UniParc:UPI00022AC52B,UniRef:UniRef100_UPI00022AC52B,UniRef:UniRef50_P45336,UniRef:UniRef90_G4A889;ec_number=2.7.13.3 contig_12 Pyrodigal gene 181997 183766 . - . ID=GCA008085315_00852_gene;locus_tag=GCA008085315_00852;gene=ggt contig_12 Pyrodigal CDS 181997 183766 . - 0 ID=GCA008085315_00852;Name=gamma-glutamyltransferase;locus_tag=GCA008085315_00852;product=gamma-glutamyltransferase;Dbxref=GO:0006750,GO:0006751,GO:0036374;gene=ggt;Parent=GCA008085315_00852_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0405,COG:E,RefSeq:WP_005575133.1,SO:0001217,UniParc:UPI0001B9F0F6,UniRef:UniRef100_UPI0001B9F0F6,UniRef:UniRef50_A0A380N3A0,UniRef:UniRef90_A0A5D0EMT3;ec_number=2.3.2.2 contig_12 Pyrodigal gene 183999 184244 . - . ID=GCA008085315_00853_gene;locus_tag=GCA008085315_00853 contig_12 Pyrodigal CDS 183999 184244 . - 0 ID=GCA008085315_00853;Name=L-lactate dehydrogenase;locus_tag=GCA008085315_00853;product=L-lactate dehydrogenase;Parent=GCA008085315_00853_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005540815.1,SO:0001217,UniParc:UPI0001B9F0F7,UniRef:UniRef100_A0A5D0KYM2,UniRef:UniRef50_Q9CNK5,UniRef:UniRef90_A0AAP7L2W6 contig_12 Pyrodigal gene 184438 185775 . - . ID=GCA008085315_00854_gene;locus_tag=GCA008085315_00854;gene=argG contig_12 Pyrodigal CDS 184438 185775 . - 0 ID=GCA008085315_00854;Name=argininosuccinate synthase;locus_tag=GCA008085315_00854;product=argininosuccinate synthase;Dbxref=GO:0004055,GO:0005524,GO:0006526,GO:0042803;gene=argG;Parent=GCA008085315_00854_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0137,COG:E,KEGG:K01940,RefSeq:WP_005545903.1,SO:0001217,UniParc:UPI0001B9F0F8,UniRef:UniRef100_UPI0001B9F0F8,UniRef:UniRef50_P0A6E4,UniRef:UniRef90_A0A142FXN4;ec_number=6.3.4.5 contig_12 Pyrodigal gene 185870 186697 . - . ID=GCA008085315_00855_gene;locus_tag=GCA008085315_00855;gene=wcaG contig_12 Pyrodigal CDS 185870 186697 . - 0 ID=GCA008085315_00855;Name=NAD-dependent dehydratase;locus_tag=GCA008085315_00855;product=NAD-dependent dehydratase;gene=wcaG;Parent=GCA008085315_00855_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0451,COG:M,RefSeq:WP_005545905.1,SO:0001217,UniParc:UPI0001B9F0F9,UniRef:UniRef100_UPI0001B9F0F9,UniRef:UniRef50_A0A3S5ECP8,UniRef:UniRef90_A0A5D0EMT9 contig_12 Pyrodigal gene 187054 188637 . + . ID=GCA008085315_00856_gene;locus_tag=GCA008085315_00856;gene=prfC contig_12 Pyrodigal CDS 187054 188637 . + 0 ID=GCA008085315_00856;Name=peptide chain release factor 3;locus_tag=GCA008085315_00856;product=peptide chain release factor 3;Dbxref=GO:0003747,GO:0003924,GO:0005525,GO:0005829,GO:0006415,GO:0006449,GO:0016149,GO:0016150,GO:0097216;gene=prfC;Parent=GCA008085315_00856_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4108,COG:J,KEGG:K02837,RefSeq:WP_005545909.1,SO:0001217,UniParc:UPI0001B9F0FB,UniRef:UniRef100_UPI0001B9F0FB,UniRef:UniRef50_P0A7I4,UniRef:UniRef90_P43928 contig_12 Pyrodigal gene 188824 189174 . + . ID=GCA008085315_00857_gene;locus_tag=GCA008085315_00857;gene=gp49 contig_12 Pyrodigal CDS 188824 189174 . + 0 ID=GCA008085315_00857;Name=Addiction module toxin RelE;locus_tag=GCA008085315_00857;product=Addiction module toxin RelE;gene=gp49;Parent=GCA008085315_00857_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4683,COG:V,RefSeq:WP_005555126.1,SO:0001217,UniParc:UPI0001B9F0FC,UniRef:UniRef100_UPI0001B9F0FC,UniRef:UniRef50_A0A0F6TTJ4,UniRef:UniRef90_A0A5D0EMT1 contig_12 Pyrodigal gene 189171 189470 . + . ID=GCA008085315_00858_gene;locus_tag=GCA008085315_00858;gene=aF2118 contig_12 Pyrodigal CDS 189171 189470 . + 0 ID=GCA008085315_00858;Name=Transcriptional regulator;locus_tag=GCA008085315_00858;product=Transcriptional regulator;gene=aF2118;Parent=GCA008085315_00858_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3620,COG:K,RefSeq:WP_005545913.1,SO:0001217,UniParc:UPI0001B9F0FD,UniRef:UniRef100_UPI0001B9F0FD,UniRef:UniRef50_A0A448MQ09,UniRef:UniRef90_A0A142FXN0 contig_12 Pyrodigal gene 189506 192439 . - . ID=GCA008085315_00859_gene;locus_tag=GCA008085315_00859;gene=glnE contig_12 Pyrodigal CDS 189506 192439 . - 0 ID=GCA008085315_00859;Name=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;locus_tag=GCA008085315_00859;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;Dbxref=GO:0008882;gene=glnE;Parent=GCA008085315_00859_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1391,COG:O,KEGG:K00982,RefSeq:WP_005545915.1,SO:0001217,UniParc:UPI0001B9F0FE,UniRef:UniRef100_UPI0001B9F0FE,UniRef:UniRef50_P30870,UniRef:UniRef90_A0A5D0EMU4;ec_number=2.7.7.89 contig_12 Pyrodigal gene 192641 192868 . + . ID=GCA008085315_00860_gene;locus_tag=GCA008085315_00860 contig_12 Pyrodigal CDS 192641 192868 . + 0 ID=GCA008085315_00860;Name=CRISPR-associated protein Cas3;locus_tag=GCA008085315_00860;product=CRISPR-associated protein Cas3;Parent=GCA008085315_00860_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005567423.1,SO:0001217,UniParc:UPI00022AC533,UniRef:UniRef100_UPI00022AC533,UniRef:UniRef50_UPI001E2C16D1,UniRef:UniRef90_UPI001E2C16D1 contig_12 Pyrodigal gene 192861 195359 . + . ID=GCA008085315_00861_gene;locus_tag=GCA008085315_00861;gene=cas3 contig_12 Pyrodigal CDS 192861 195359 . + 0 ID=GCA008085315_00861;Name=CRISPR-associated helicase Cas3;locus_tag=GCA008085315_00861;product=CRISPR-associated helicase Cas3;gene=cas3;Parent=GCA008085315_00861_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1203,COG:V,RefSeq:WP_148320753.1,SO:0001217,UniParc:UPI0011DC221D,UniRef:UniRef100_UPI0011DC221D,UniRef:UniRef50_A0A0C1HD76,UniRef:UniRef90_G4A899 contig_12 Pyrodigal gene 195385 196041 . + . ID=GCA008085315_00862_gene;locus_tag=GCA008085315_00862;gene=cas5c contig_12 Pyrodigal CDS 195385 196041 . + 0 ID=GCA008085315_00862;Name=type I-C CRISPR-associated protein Cas5c;locus_tag=GCA008085315_00862;product=type I-C CRISPR-associated protein Cas5c;Dbxref=GO:0004519,GO:0043571,GO:0051607;gene=cas5c;Parent=GCA008085315_00862_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K19119,RefSeq:WP_233443269.1,SO:0001217,UniParc:UPI001EEC1072,UniRef:UniRef100_UPI001EEC1072,UniRef:UniRef50_D0W8X4,UniRef:UniRef90_UPI001EEAECB4 contig_12 Pyrodigal gene 196068 196295 . + . ID=GCA008085315_00863_gene;locus_tag=GCA008085315_00863 contig_12 Pyrodigal CDS 196068 196295 . + 0 ID=GCA008085315_00863;Name=hypothetical protein;locus_tag=GCA008085315_00863;product=hypothetical protein;Parent=GCA008085315_00863_gene;inference=ab initio prediction:Pyrodigal:3.5 contig_12 Infernal gene 196449 196548 . - . ID=GCA008085315_00864_gene;locus_tag=GCA008085315_00864;gene=AaHKsRNA22 contig_12 Infernal ncRNA 196449 196548 1.3e-13 - . ID=GCA008085315_00864;Name=Aggregatibacter sRNA 22;locus_tag=GCA008085315_00864;product=Aggregatibacter sRNA 22;Dbxref=RFAM:RF02902;Parent=GCA008085315_00864_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02902 contig_12 Pyrodigal gene 196743 197216 . + . ID=GCA008085315_00865_gene;locus_tag=GCA008085315_00865 contig_12 Pyrodigal CDS 196743 197216 . + 0 ID=GCA008085315_00865;Name=CRISPR-associated exonuclease Cas4;locus_tag=GCA008085315_00865;product=CRISPR-associated exonuclease Cas4;Parent=GCA008085315_00865_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A336N858 contig_12 Pyrodigal gene 197206 198960 . + . ID=GCA008085315_00866_gene;locus_tag=GCA008085315_00866;gene=ybjD contig_12 Pyrodigal CDS 197206 198960 . + 0 ID=GCA008085315_00866;Name=ATP-dependent endonuclease;locus_tag=GCA008085315_00866;product=ATP-dependent endonuclease;gene=ybjD;Parent=GCA008085315_00866_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3593,COG:L,KEGG:K07459,RefSeq:WP_005545920.1,SO:0001217,UniParc:UPI0001B9F101,UniRef:UniRef100_UPI0001B9F101,UniRef:UniRef50_A0AA37U0G1,UniRef:UniRef90_UPI0011D4B2E6 contig_12 Pyrodigal gene 199014 200027 . + . ID=GCA008085315_00867_gene;locus_tag=GCA008085315_00867;gene=cas1c contig_12 Pyrodigal CDS 199014 200027 . + 0 ID=GCA008085315_00867;Name=type I-C CRISPR-associated endonuclease Cas1c;locus_tag=GCA008085315_00867;product=type I-C CRISPR-associated endonuclease Cas1c;Dbxref=GO:0003676,GO:0004519,GO:0043571,GO:0046872,GO:0051607;gene=cas1c;Parent=GCA008085315_00867_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1518,COG:V,RefSeq:WP_005545922.1,SO:0001217,UniParc:UPI0001B9F102,UniRef:UniRef100_UPI0001B9F102,UniRef:UniRef50_A0A448PX07,UniRef:UniRef90_A0A5D0EMU7 contig_12 Pyrodigal gene 200031 200324 . + . ID=GCA008085315_00868_gene;locus_tag=GCA008085315_00868;gene=cas2 contig_12 Pyrodigal CDS 200031 200324 . + 0 ID=GCA008085315_00868;Name=CRISPR-associated endonuclease Cas2;locus_tag=GCA008085315_00868;product=CRISPR-associated endonuclease Cas2;Dbxref=GO:0004521,GO:0043571;gene=cas2;Parent=GCA008085315_00868_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1343,COG:V,RefSeq:WP_005545924.1,SO:0001217,UniParc:UPI0001B9F103,UniRef:UniRef100_UPI0001B9F103,UniRef:UniRef50_Q72WF4,UniRef:UniRef90_A0A142FXM2 contig_12 Infernal regulatory_region 200745 200832 1.6e-10 + . ID=FFLMJBKAJI_98;Name=TPP riboswitch aptamer (THI element);product=TPP riboswitch aptamer (THI element);Dbxref=RFAM:RF00059;inference=profile:Rfam:RF00059;Note=SO:0000035;regulatory_class=riboswitch contig_12 Pyrodigal gene 200949 201329 . + . ID=GCA008085315_00869_gene;locus_tag=GCA008085315_00869 contig_12 Pyrodigal CDS 200949 201329 . + 0 ID=GCA008085315_00869;Name=Phosphomethylpyrimidine kinase;locus_tag=GCA008085315_00869;product=Phosphomethylpyrimidine kinase;Parent=GCA008085315_00869_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005545926.1,SO:0001217,UniParc:UPI0001B9F104,UniRef:UniRef100_UPI0001B9F104,UniRef:UniRef50_A0A142G2B5,UniRef:UniRef90_A0A142G2B5 contig_12 Pyrodigal gene 201351 202355 . + . ID=GCA008085315_00870_gene;locus_tag=GCA008085315_00870;gene=thiB contig_12 Pyrodigal CDS 201351 202355 . + 0 ID=GCA008085315_00870;Name=thiamine ABC transporter substrate binding subunit;locus_tag=GCA008085315_00870;product=thiamine ABC transporter substrate binding subunit;Dbxref=GO:0015888,GO:0030288,GO:0030975,GO:0048502,GO:0055052;gene=thiB;Parent=GCA008085315_00870_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4143,COG:H,KEGG:K02064,RefSeq:WP_005540280.1,SO:0001217,UniParc:UPI0001B9F105,UniRef:UniRef100_A0A5D0ELZ4,UniRef:UniRef50_A0A5D0ELZ4,UniRef:UniRef90_A0A5D0ELZ4 contig_12 Pyrodigal gene 202364 203992 . + . ID=GCA008085315_00871_gene;locus_tag=GCA008085315_00871;gene=thiP contig_12 Pyrodigal CDS 202364 203992 . + 0 ID=GCA008085315_00871;Name=thiamine/thiamine pyrophosphate ABC transporter permease ThiP;locus_tag=GCA008085315_00871;product=thiamine/thiamine pyrophosphate ABC transporter permease ThiP;gene=thiP;Parent=GCA008085315_00871_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1178,COG:P,KEGG:K02063,RefSeq:WP_148320755.1,SO:0001217,UniParc:UPI0011D3E46F,UniRef:UniRef100_UPI0011D3E46F,UniRef:UniRef50_P44985,UniRef:UniRef90_A0A142G2B7 contig_12 Pyrodigal gene 203976 204623 . + . ID=GCA008085315_00872_gene;locus_tag=GCA008085315_00872;gene=thiQ contig_12 Pyrodigal CDS 203976 204623 . + 0 ID=GCA008085315_00872;Name=thiamine ABC transporter ATP-binding protein;locus_tag=GCA008085315_00872;product=thiamine ABC transporter ATP-binding protein;Dbxref=GO:0005524,GO:0015888,GO:0016020,GO:0030974,GO:0048502;gene=thiQ;Parent=GCA008085315_00872_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3840,COG:H,RefSeq:WP_005567444.1,SO:0001217,UniParc:UPI0001B9F107,UniRef:UniRef100_UPI0001B9F107,UniRef:UniRef50_E6KYJ3,UniRef:UniRef90_E6KYJ3;ec_number=7.6.2.15 contig_12 Pyrodigal gene 204668 205672 . + . ID=GCA008085315_00873_gene;locus_tag=GCA008085315_00873;gene=bioB contig_12 Pyrodigal CDS 204668 205672 . + 0 ID=GCA008085315_00873;Name=biotin synthase BioB;locus_tag=GCA008085315_00873;product=biotin synthase BioB;Dbxref=GO:0004076,GO:0005506,GO:0009102,GO:0051536,GO:0051537,GO:0051539,GO:1904047;gene=bioB;Parent=GCA008085315_00873_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0502,COG:H,KEGG:K01012,RefSeq:WP_005540274.1,SO:0001217,UniParc:UPI0001B9F108,UniRef:UniRef100_A0A142G2B9,UniRef:UniRef50_A9LZ69,UniRef:UniRef90_P44987;ec_number=2.8.1.6 contig_12 Pyrodigal gene 205770 207152 . - . ID=GCA008085315_00874_gene;locus_tag=GCA008085315_00874;gene=degQ contig_12 Pyrodigal CDS 205770 207152 . - 0 ID=GCA008085315_00874;Name=Periplasmic pH-dependent serine endoprotease DegQ;locus_tag=GCA008085315_00874;product=Periplasmic pH-dependent serine endoprotease DegQ;gene=degQ;Parent=GCA008085315_00874_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0265,COG:O,RefSeq:WP_005545932.1,SO:0001217,UniParc:UPI0001B9F109,UniRef:UniRef100_UPI0001B9F109,UniRef:UniRef50_P39099,UniRef:UniRef90_A0A336N641 contig_12 Pyrodigal gene 207343 207753 . - . ID=GCA008085315_00875_gene;locus_tag=GCA008085315_00875;gene=yhcB contig_12 Pyrodigal CDS 207343 207753 . - 0 ID=GCA008085315_00875;Name=Z-ring associated protein G;locus_tag=GCA008085315_00875;product=Z-ring associated protein G;gene=yhcB;Parent=GCA008085315_00875_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3105,COG:D,KEGG:K09908,RefSeq:WP_005545935.1,SO:0001217,UniParc:UPI0001B9F10B,UniRef:UniRef100_UPI0001B9F10B,UniRef:UniRef50_P45279,UniRef:UniRef90_A0A142FY54 contig_12 Pyrodigal gene 207923 209686 . - . ID=GCA008085315_00876_gene;locus_tag=GCA008085315_00876;gene=ycaO contig_12 Pyrodigal CDS 207923 209686 . - 0 ID=GCA008085315_00876;Name=30S ribosomal protein S12 methylthiotransferase accessory factor YcaO;locus_tag=GCA008085315_00876;product=30S ribosomal protein S12 methylthiotransferase accessory factor YcaO;gene=ycaO;Parent=GCA008085315_00876_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1944,COG:J,KEGG:K09136,RefSeq:WP_148320757.1,SO:0001217,UniParc:UPI0011D38B07,UniRef:UniRef100_UPI0011D38B07,UniRef:UniRef50_P75838,UniRef:UniRef90_E6KWX1 contig_12 Pyrodigal gene 209777 210982 . - . ID=GCA008085315_00877_gene;locus_tag=GCA008085315_00877;gene=manA contig_12 Pyrodigal CDS 209777 210982 . - 0 ID=GCA008085315_00877;Name=mannose-6-phosphate isomerase%2C class I;locus_tag=GCA008085315_00877;product=mannose-6-phosphate isomerase%2C class I;Dbxref=GO:0004476,GO:0005975,GO:0008270;gene=manA;Parent=GCA008085315_00877_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1482,COG:G,RefSeq:WP_148320759.1,SO:0001217,UniParc:UPI0011D51E99,UniRef:UniRef100_UPI0011D51E99,UniRef:UniRef50_Q9CMJ5,UniRef:UniRef90_A0A5D0EP20;ec_number=5.3.1.8 contig_12 Pyrodigal gene 211158 211496 . + . ID=GCA008085315_00878_gene;locus_tag=GCA008085315_00878;gene=yegP contig_12 Pyrodigal CDS 211158 211496 . + 0 ID=GCA008085315_00878;Name=DUF1508 domain-containing protein;locus_tag=GCA008085315_00878;product=DUF1508 domain-containing protein;gene=yegP;Parent=GCA008085315_00878_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3422,COG:S,KEGG:K09946,RefSeq:WP_005540212.1,SO:0001217,UniParc:UPI0001B9F157,UniRef:UniRef100_A0A5D0EP19,UniRef:UniRef50_Q6FE77,UniRef:UniRef90_A0A5D0EP19 contig_12 Pyrodigal gene 211685 213178 . + . ID=GCA008085315_00879_gene;locus_tag=GCA008085315_00879;gene=ptsG2 contig_12 Pyrodigal CDS 211685 213178 . + 0 ID=GCA008085315_00879;Name=PTS family glucose porter%2C IICBA component;locus_tag=GCA008085315_00879;product=PTS family glucose porter%2C IICBA component;gene=ptsG2;Parent=GCA008085315_00879_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1264,COG:G,RefSeq:WP_005575159.1,SO:0001217,UniParc:UPI0001B9F158,UniRef:UniRef100_UPI0001B9F158,UniRef:UniRef50_A0A4P7QFW9,UniRef:UniRef90_E6KWX4 contig_12 Pyrodigal gene 213236 213934 . - . ID=GCA008085315_00880_gene;locus_tag=GCA008085315_00880 contig_12 Pyrodigal CDS 213236 213934 . - 0 ID=GCA008085315_00880;Name=SAM-dependent methyltransferase;locus_tag=GCA008085315_00880;product=SAM-dependent methyltransferase;Parent=GCA008085315_00880_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005545943.1,SO:0001217,UniParc:UPI0001B9F159,UniRef:UniRef100_UPI0001B9F159,UniRef:UniRef50_A0A1V3J9L4,UniRef:UniRef90_A0A5D0EP34 contig_12 Pyrodigal gene 213955 214656 . + . ID=GCA008085315_00881_gene;locus_tag=GCA008085315_00881;gene=gloB contig_12 Pyrodigal CDS 213955 214656 . + 0 ID=GCA008085315_00881;Name=hydroxyacylglutathione hydrolase;locus_tag=GCA008085315_00881;product=hydroxyacylglutathione hydrolase;Dbxref=GO:0004416,GO:0019243;gene=gloB;Parent=GCA008085315_00881_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0491,COG:R,RefSeq:WP_005545945.1,SO:0001217,UniParc:UPI0001B9F15A,UniRef:UniRef100_UPI0001B9F15A,UniRef:UniRef50_P71374,UniRef:UniRef90_A0A142FY49;ec_number=3.1.2.6 contig_12 Pyrodigal gene 214841 216145 . + . ID=GCA008085315_00882_gene;locus_tag=GCA008085315_00882;gene=hemA contig_12 Pyrodigal CDS 214841 216145 . + 0 ID=GCA008085315_00882;Name=glutamyl-tRNA reductase;locus_tag=GCA008085315_00882;product=glutamyl-tRNA reductase;Dbxref=GO:0008883,GO:0050661;gene=hemA;Parent=GCA008085315_00882_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0373,COG:H,KEGG:K02492,RefSeq:WP_005545947.1,SO:0001217,UniParc:UPI0001B9F15B,UniRef:UniRef100_UPI0001B9F15B,UniRef:UniRef50_P95525,UniRef:UniRef90_A0A5D0EP41;ec_number=1.2.1.70 contig_12 Pyrodigal gene 216207 217430 . + . ID=GCA008085315_00883_gene;locus_tag=GCA008085315_00883;gene=nagC contig_12 Pyrodigal CDS 216207 217430 . + 0 ID=GCA008085315_00883;Name=ROK family protein;locus_tag=GCA008085315_00883;product=ROK family protein;gene=nagC;Parent=GCA008085315_00883_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1940,COG:GK,RefSeq:WP_005545949.1,SO:0001217,UniParc:UPI0001B9F15C,UniRef:UniRef100_UPI0001B9F15C,UniRef:UniRef50_P0AF20,UniRef:UniRef90_U1S7D3 contig_12 Infernal gene 217448 217543 . + . ID=GCA008085315_00884_gene;locus_tag=GCA008085315_00884;gene=AaHKsRNA22 contig_12 Infernal ncRNA 217448 217543 4.6e-06 + . ID=GCA008085315_00884;Name=Aggregatibacter sRNA 22;locus_tag=GCA008085315_00884;product=Aggregatibacter sRNA 22;Dbxref=RFAM:RF02902;Parent=GCA008085315_00884_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02902 contig_12 tRNAscan-SE gene 217667 217743 . + . ID=GCA008085315_00885_gene;locus_tag=GCA008085315_00885;gene=trnM contig_12 tRNAscan-SE tRNA 217667 217743 . + . ID=GCA008085315_00885;Name=tRNA-Met(cat);locus_tag=GCA008085315_00885;product=tRNA-Met(cat);gene=trnM;anti_codon=cat;amino_acid=Met;Parent=GCA008085315_00885_gene;inference=profile:tRNAscan:2.0;Note=SO:0000266 contig_12 tRNAscan-SE gene 217749 217833 . + . ID=GCA008085315_00886_gene;locus_tag=GCA008085315_00886;gene=trnL contig_12 tRNAscan-SE tRNA 217749 217833 . + . ID=GCA008085315_00886;Name=tRNA-Leu(tag);locus_tag=GCA008085315_00886;product=tRNA-Leu(tag);gene=trnL;anti_codon=tag;amino_acid=Leu;Parent=GCA008085315_00886_gene;inference=profile:tRNAscan:2.0;Note=SO:0000264 contig_12 tRNAscan-SE gene 217863 217937 . + . ID=GCA008085315_00887_gene;locus_tag=GCA008085315_00887;gene=trnQ contig_12 tRNAscan-SE tRNA 217863 217937 . + . ID=GCA008085315_00887;Name=tRNA-Gln(ttg);locus_tag=GCA008085315_00887;product=tRNA-Gln(ttg);gene=trnQ;anti_codon=ttg;amino_acid=Gln;Parent=GCA008085315_00887_gene;inference=profile:tRNAscan:2.0;Note=SO:0000261 contig_12 tRNAscan-SE gene 217975 218049 . + . ID=GCA008085315_00888_gene;locus_tag=GCA008085315_00888;gene=trnQ contig_12 tRNAscan-SE tRNA 217975 218049 . + . ID=GCA008085315_00888;Name=tRNA-Gln(ttg);locus_tag=GCA008085315_00888;product=tRNA-Gln(ttg);gene=trnQ;anti_codon=ttg;amino_acid=Gln;Parent=GCA008085315_00888_gene;inference=profile:tRNAscan:2.0;Note=SO:0000261 contig_12 Pyrodigal gene 218167 218811 . - . ID=GCA008085315_00889_gene;locus_tag=GCA008085315_00889;gene=adk contig_12 Pyrodigal CDS 218167 218811 . - 0 ID=GCA008085315_00889;Name=adenylate kinase;locus_tag=GCA008085315_00889;product=adenylate kinase;Dbxref=GO:0004017,GO:0005524,GO:0005737,GO:0006139,GO:0044209;gene=adk;Parent=GCA008085315_00889_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0563,COG:F,SO:0001217,UniRef:UniRef50_P24323,UniRef:UniRef90_P57837;ec_number=2.7.4.3 contig_12 Pyrodigal gene 218944 220233 . - . ID=GCA008085315_00890_gene;locus_tag=GCA008085315_00890 contig_12 Pyrodigal CDS 218944 220233 . - 0 ID=GCA008085315_00890;Name=MFS transporter;locus_tag=GCA008085315_00890;product=MFS transporter;Parent=GCA008085315_00890_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K08218,RefSeq:WP_005539255.1,SO:0001217,UniParc:UPI0001B9F15E,UniRef:UniRef100_A0A142FY94,UniRef:UniRef50_A0A0A8K2K5,UniRef:UniRef90_A0A142FY94 contig_12 Pyrodigal gene 220240 220581 . - . ID=GCA008085315_00891_gene;locus_tag=GCA008085315_00891;gene=hypA contig_12 Pyrodigal CDS 220240 220581 . - 0 ID=GCA008085315_00891;Name=hydrogenase maturation nickel metallochaperone HypA;locus_tag=GCA008085315_00891;product=hydrogenase maturation nickel metallochaperone HypA;Dbxref=GO:0008901,GO:0016151,GO:0036211;gene=hypA;Parent=GCA008085315_00891_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0375,COG:O,RefSeq:WP_005539253.1,SO:0001217,UniParc:UPI0001B9F15F,UniRef:UniRef100_A0A142FY93,UniRef:UniRef50_E6KYG2,UniRef:UniRef90_E6KYG2 contig_12 Pyrodigal gene 220587 221603 . - . ID=GCA008085315_00892_gene;locus_tag=GCA008085315_00892;gene=galE contig_12 Pyrodigal CDS 220587 221603 . - 0 ID=GCA008085315_00892;Name=UDP-glucose 4-epimerase GalE;locus_tag=GCA008085315_00892;product=UDP-glucose 4-epimerase GalE;Dbxref=GO:0003978,GO:0006012;gene=galE;Parent=GCA008085315_00892_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1087,COG:M,RefSeq:WP_005539250.1,SO:0001217,UniParc:UPI0001B9F160,UniRef:UniRef100_A0A142FY92,UniRef:UniRef50_P24325,UniRef:UniRef90_A0A142FY92;ec_number=5.1.3.2 contig_12 Pyrodigal gene 221797 222183 . + . ID=GCA008085315_00893_gene;locus_tag=GCA008085315_00893;gene=yhaH contig_12 Pyrodigal CDS 221797 222183 . + 0 ID=GCA008085315_00893;Name=Aminopeptidase;locus_tag=GCA008085315_00893;product=Aminopeptidase;gene=yhaH;Parent=GCA008085315_00893_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3152,COG:S,RefSeq:WP_005539248.1,SO:0001217,UniParc:UPI0001B9F161,UniRef:UniRef100_A0A142FY91,UniRef:UniRef50_A0A2S7VWW7,UniRef:UniRef90_A0A142FY91 contig_12 Pyrodigal gene 222308 223639 . + . ID=GCA008085315_00894_gene;locus_tag=GCA008085315_00894;gene=nCS2 contig_12 Pyrodigal CDS 222308 223639 . + 0 ID=GCA008085315_00894;Name=Inner membrane protein YjcD;locus_tag=GCA008085315_00894;product=Inner membrane protein YjcD;gene=nCS2;Parent=GCA008085315_00894_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2252,COG:F,KEGG:K06901,RefSeq:WP_053329988.1,SO:0001217,UniParc:UPI0006A6FFC7,UniRef:UniRef100_UPI0006A6FFC7,UniRef:UniRef50_Q46817,UniRef:UniRef90_E6KYG0 contig_12 Pyrodigal gene 223667 225001 . - . ID=GCA008085315_00895_gene;locus_tag=GCA008085315_00895;gene=ttcA contig_12 Pyrodigal CDS 223667 225001 . - 0 ID=GCA008085315_00895;Name=tRNA(Ile)-lysidine synthase;locus_tag=GCA008085315_00895;product=tRNA(Ile)-lysidine synthase;gene=ttcA;Parent=GCA008085315_00895_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0037,COG:J,KEGG:K04075,SO:0001217,UniRef:UniRef50_P44689,UniRef:UniRef90_A0A5D0EPC8;ec_number=6.3.4.19 contig_12 Pyrodigal gene 225045 225902 . - . ID=GCA008085315_00896_gene;locus_tag=GCA008085315_00896;gene=pdxY contig_12 Pyrodigal CDS 225045 225902 . - 0 ID=GCA008085315_00896;Name=pyridoxal kinase PdxY;locus_tag=GCA008085315_00896;product=pyridoxal kinase PdxY;Dbxref=GO:0008478,GO:0009443;gene=pdxY;Parent=GCA008085315_00896_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2240,COG:H,KEGG:K00868,RefSeq:WP_005545960.1,SO:0001217,UniParc:UPI0001B9F165,UniRef:UniRef100_UPI0001B9F165,UniRef:UniRef50_P77150,UniRef:UniRef90_A0A142FY88;ec_number=2.7.1.35 contig_12 Pyrodigal gene 225965 226918 . - . ID=GCA008085315_00897_gene;locus_tag=GCA008085315_00897;gene=accA contig_12 Pyrodigal CDS 225965 226918 . - 0 ID=GCA008085315_00897;Name=acetyl-CoA carboxylase carboxyl transferase subunit alpha;locus_tag=GCA008085315_00897;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;Dbxref=GO:0003989,GO:0006633,GO:0009317;gene=accA;Parent=GCA008085315_00897_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0825,COG:I,RefSeq:WP_005545962.1,SO:0001217,UniParc:UPI0001B9F166,UniRef:UniRef100_G4A7B1,UniRef:UniRef50_Q4ZWR2,UniRef:UniRef90_A0A836YY01;ec_number=6.4.1.2 contig_12 Pyrodigal gene 228093 228506 . + . ID=GCA008085315_00898_gene;locus_tag=GCA008085315_00898;gene=uraH contig_12 Pyrodigal CDS 228093 228506 . + 0 ID=GCA008085315_00898;Name=hydroxyisourate hydrolase;locus_tag=GCA008085315_00898;product=hydroxyisourate hydrolase;Dbxref=GO:0006144,GO:0033971;gene=uraH;Parent=GCA008085315_00898_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2351,COG:F,RefSeq:WP_005539234.1,SO:0001217,UniParc:UPI00022ABF24,UniRef:UniRef100_A0A142FY86,UniRef:UniRef50_A0A250FFR3,UniRef:UniRef90_A0A142FY86;ec_number=3.5.2.17 contig_12 Pyrodigal gene 228700 229650 . + . ID=GCA008085315_00899_gene;locus_tag=GCA008085315_00899 contig_12 Pyrodigal CDS 228700 229650 . + 0 ID=GCA008085315_00899;Name=hypothetical protein;locus_tag=GCA008085315_00899;product=hypothetical protein;Parent=GCA008085315_00899_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005545964.1,SO:0001217,UniParc:UPI0001B9F167,UniRef:UniRef100_UPI0001B9F167,UniRef:UniRef50_A0A011LWG0,UniRef:UniRef90_A0A5D0EPT2,PFAM:PF24738.1 contig_12 Pyrodigal gene 230152 230331 . - . ID=GCA008085315_00900_gene;locus_tag=GCA008085315_00900;gene=alpA contig_12 Pyrodigal CDS 230152 230331 . - 0 ID=GCA008085315_00900;Name=AlpA family transcriptional regulator;locus_tag=GCA008085315_00900;product=AlpA family transcriptional regulator;gene=alpA;Parent=GCA008085315_00900_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_025298341.1,SO:0001217,UniParc:UPI0004376241,UniRef:UniRef100_UPI0004376241,UniRef:UniRef50_E6KYF6,UniRef:UniRef90_UPI001E5ECBB8 contig_12 Pyrodigal gene 230377 230691 . - . ID=GCA008085315_00901_gene;locus_tag=GCA008085315_00901 contig_12 Pyrodigal CDS 230377 230691 . - 0 ID=GCA008085315_00901;Name=hypothetical protein;locus_tag=GCA008085315_00901;product=hypothetical protein;Parent=GCA008085315_00901_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005567464.1,SO:0001217,UniParc:UPI00022AC80B,UniRef:UniRef100_UPI00022AC80B,UniRef:UniRef50_UPI00201D1BE1,UniRef:UniRef90_UPI00201D1BE1 contig_12 Pyrodigal gene 230685 231302 . - . ID=GCA008085315_00902_gene;locus_tag=GCA008085315_00902 contig_12 Pyrodigal CDS 230685 231302 . - 0 ID=GCA008085315_00902;Name=BRO family protein;locus_tag=GCA008085315_00902;product=BRO family protein;Parent=GCA008085315_00902_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148320765.1,SO:0001217,UniParc:UPI0011D62168,UniRef:UniRef100_UPI0011D62168,UniRef:UniRef50_A0A380TYU7,UniRef:UniRef90_UPI0011D62168 contig_12 Infernal gene 231568 231651 . - . ID=GCA008085315_00903_gene;locus_tag=GCA008085315_00903;gene=sRNA-Xcc1 contig_12 Infernal ncRNA 231568 231651 2.3e-09 - . ID=GCA008085315_00903;Name=sRNA-Xcc1;locus_tag=GCA008085315_00903;product=sRNA-Xcc1;Dbxref=RFAM:RF02221;Parent=GCA008085315_00903_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02221 contig_12 Pyrodigal gene 231866 232090 . - . ID=GCA008085315_00904_gene;locus_tag=GCA008085315_00904 contig_12 Pyrodigal CDS 231866 232090 . - 0 ID=GCA008085315_00904;Name=Holin;locus_tag=GCA008085315_00904;product=Holin;Parent=GCA008085315_00904_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005545968.1,SO:0001217,UniParc:UPI0001B9F169,UniRef:UniRef100_A0A5D0KYV7,UniRef:UniRef50_A0A5D0KYV7,UniRef:UniRef90_A0A5D0KYV7 contig_12 Pyrodigal gene 232155 232511 . - . ID=GCA008085315_00905_gene;locus_tag=GCA008085315_00905 contig_12 Pyrodigal CDS 232155 232511 . - 0 ID=GCA008085315_00905;Name=DUF2513 domain-containing protein;locus_tag=GCA008085315_00905;product=DUF2513 domain-containing protein;Parent=GCA008085315_00905_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005572272.1,SO:0001217,UniParc:UPI00022AE383,UniRef:UniRef100_UPI00022AE383,UniRef:UniRef50_P44181,UniRef:UniRef90_UPI00215B4C39 contig_12 Pyrodigal gene 232744 232995 . - . ID=GCA008085315_00906_gene;locus_tag=GCA008085315_00906 contig_12 Pyrodigal CDS 232744 232995 . - 0 ID=GCA008085315_00906;Name=hypothetical protein;locus_tag=GCA008085315_00906;product=hypothetical protein;Parent=GCA008085315_00906_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148320767.1,SO:0001217,UniParc:UPI0011D72B91,UniRef:UniRef100_UPI0011D72B91,UniRef:UniRef50_UPI000A429ED4,UniRef:UniRef90_UPI0011D72B91 contig_12 Pyrodigal gene 233128 233826 . + . ID=GCA008085315_00907_gene;locus_tag=GCA008085315_00907 contig_12 Pyrodigal CDS 233128 233826 . + 0 ID=GCA008085315_00907;Name=Helix-turn-helix transcriptional regulator;locus_tag=GCA008085315_00907;product=Helix-turn-helix transcriptional regulator;Parent=GCA008085315_00907_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2932,COG:X,RefSeq:WP_148320769.1,SO:0001217,UniParc:UPI0011D6F2D8,UniRef:UniRef100_UPI0011D6F2D8,UniRef:UniRef50_C6AM31,UniRef:UniRef90_A0A2S9S8M0 contig_12 Pyrodigal gene 233847 234221 . + . ID=GCA008085315_00908_gene;locus_tag=GCA008085315_00908 contig_12 Pyrodigal CDS 233847 234221 . + 0 ID=GCA008085315_00908;Name=hypothetical protein;locus_tag=GCA008085315_00908;product=hypothetical protein;Parent=GCA008085315_00908_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148320771.1,SO:0001217,UniParc:UPI0011D36DB7,UniRef:UniRef100_UPI0011D36DB7,UniRef:UniRef50_A0A8S5PAB8,UniRef:UniRef90_UPI0011D36DB7 contig_12 Pyrodigal gene 234374 235117 . + . ID=GCA008085315_00909_gene;locus_tag=GCA008085315_00909 contig_12 Pyrodigal CDS 234374 235117 . + 0 ID=GCA008085315_00909;Name=Abi family protein;locus_tag=GCA008085315_00909;product=Abi family protein;Parent=GCA008085315_00909_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148320773.1,SO:0001217,UniParc:UPI0011D3DA66,UniRef:UniRef100_UPI001F35BFA3,UniRef:UniRef90_A0A8S5P9I8 contig_12 Pyrodigal gene 235080 235409 . + . ID=GCA008085315_00910_gene;locus_tag=GCA008085315_00910 contig_12 Pyrodigal CDS 235080 235409 . + 0 ID=GCA008085315_00910;Name=hypothetical protein;locus_tag=GCA008085315_00910;product=hypothetical protein;Parent=GCA008085315_00910_gene;inference=ab initio prediction:Pyrodigal:3.5 contig_12 Pyrodigal gene 235507 235710 . + . ID=GCA008085315_00911_gene;locus_tag=GCA008085315_00911 contig_12 Pyrodigal CDS 235507 235710 . + 0 ID=GCA008085315_00911;Name=hypothetical protein;locus_tag=GCA008085315_00911;product=hypothetical protein;Parent=GCA008085315_00911_gene;inference=ab initio prediction:Pyrodigal:3.5 contig_12 Pyrodigal gene 235785 236069 . - . ID=GCA008085315_00912_gene;locus_tag=GCA008085315_00912;gene=higA contig_12 Pyrodigal CDS 235785 236069 . - 0 ID=GCA008085315_00912;Name=Antitoxin HigA;locus_tag=GCA008085315_00912;product=Antitoxin HigA;gene=higA;Parent=GCA008085315_00912_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148320776.1,SO:0001217,UniParc:UPI0011D8F05E,UniRef:UniRef100_UPI0011D8F05E,UniRef:UniRef50_A0A455VI17,UniRef:UniRef90_A0A377JF14 contig_12 Pyrodigal gene 236059 236379 . - . ID=GCA008085315_00913_gene;locus_tag=GCA008085315_00913;gene=relE contig_12 Pyrodigal CDS 236059 236379 . - 0 ID=GCA008085315_00913;Name=Addiction module toxin RelE;locus_tag=GCA008085315_00913;product=Addiction module toxin RelE;gene=relE;Parent=GCA008085315_00913_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148320778.1,SO:0001217,UniParc:UPI0011D973E3,UniRef:UniRef100_UPI0011D973E3,UniRef:UniRef50_A0A3B0MPE3,UniRef:UniRef90_A0A1B8QYK9 contig_12 Pyrodigal gene 236449 237093 . + . ID=GCA008085315_00914_gene;locus_tag=GCA008085315_00914 contig_12 Pyrodigal CDS 236449 237093 . + 0 ID=GCA008085315_00914;Name=Baseplate protein;locus_tag=GCA008085315_00914;product=Baseplate protein;Parent=GCA008085315_00914_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148320779.1,SO:0001217,UniParc:UPI0011D7B4C4,UniRef:UniRef100_UPI0011D7B4C4,UniRef:UniRef50_A0A4R1KSV6,UniRef:UniRef90_A0A5D0EL94 contig_12 Pyrodigal gene 237090 237449 . + . ID=GCA008085315_00915_gene;locus_tag=GCA008085315_00915 contig_12 Pyrodigal CDS 237090 237449 . + 0 ID=GCA008085315_00915;Name=baseplate wedge subunit;locus_tag=GCA008085315_00915;product=baseplate wedge subunit;Parent=GCA008085315_00915_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005545972.1,SO:0001217,UniParc:UPI00001A3678,UniRef:UniRef100_Q7Y5S5,UniRef:UniRef50_A0A0M1GPA0,UniRef:UniRef90_Q7Y5S5 contig_12 Pyrodigal gene 237475 237894 . - . ID=GCA008085315_00916_gene;locus_tag=GCA008085315_00916;gene=hicB contig_12 Pyrodigal CDS 237475 237894 . - 0 ID=GCA008085315_00916;Name=type II toxin-antitoxin system HicB family antitoxin;locus_tag=GCA008085315_00916;product=type II toxin-antitoxin system HicB family antitoxin;gene=hicB;Parent=GCA008085315_00916_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1598,COG:V,KEGG:K18843,RefSeq:WP_005545975.1,SO:0001217,UniParc:UPI0001B9F16B,UniRef:UniRef100_UPI0001B9F16B,UniRef:UniRef50_A0A7H1MAV4,UniRef:UniRef90_UPI00022BFF10 contig_12 Pyrodigal gene 237946 238128 . - . ID=GCA008085315_00917_gene;locus_tag=GCA008085315_00917;gene=hicA contig_12 Pyrodigal CDS 237946 238128 . - 0 ID=GCA008085315_00917;Name=Type II toxin-antitoxin system HicA family toxin;locus_tag=GCA008085315_00917;product=Type II toxin-antitoxin system HicA family toxin;gene=hicA;Parent=GCA008085315_00917_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1724,COG:R,KEGG:K07339,RefSeq:WP_005578509.1,SO:0001217,UniParc:UPI00022BFF11,UniRef:UniRef100_UPI00022BFF11,UniRef:UniRef50_B8F4G6,UniRef:UniRef90_A0A0F5EPP6;ec_number=3.1.-.- contig_12 Pyrodigal gene 238382 239170 . + . ID=GCA008085315_00918_gene;locus_tag=GCA008085315_00918 contig_12 Pyrodigal CDS 238382 239170 . + 0 ID=GCA008085315_00918;Name=OB-fold protein;locus_tag=GCA008085315_00918;product=OB-fold protein;Parent=GCA008085315_00918_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148333959.1,SO:0001217,UniParc:UPI0011D775AD,UniRef:UniRef100_UPI0011D775AD,UniRef:UniRef50_A0A369YIK3,UniRef:UniRef90_UPI0011D8D4DB contig_12 Infernal gene 239331 239414 . + . ID=GCA008085315_00919_gene;locus_tag=GCA008085315_00919;gene=sRNA-Xcc1 contig_12 Infernal ncRNA 239331 239414 1.4e-10 + . ID=GCA008085315_00919;Name=sRNA-Xcc1;locus_tag=GCA008085315_00919;product=sRNA-Xcc1;Dbxref=RFAM:RF02221;Parent=GCA008085315_00919_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02221 contig_12 Pyrodigal gene 239451 240323 . + . ID=GCA008085315_00920_gene;locus_tag=GCA008085315_00920 contig_12 Pyrodigal CDS 239451 240323 . + 0 ID=GCA008085315_00920;Name=BRO family protein;locus_tag=GCA008085315_00920;product=BRO family protein;Parent=GCA008085315_00920_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148320781.1,SO:0001217,UniParc:UPI0011D40A7E,UniRef:UniRef100_UPI0011D40A7E,UniRef:UniRef50_A0A2S9RQT3,UniRef:UniRef90_UPI0011D40A7E contig_12 Pyrodigal gene 240685 241668 . + . ID=GCA008085315_00921_gene;locus_tag=GCA008085315_00921 contig_12 Pyrodigal CDS 240685 241668 . + 0 ID=GCA008085315_00921;Name=phage tail protein;locus_tag=GCA008085315_00921;product=phage tail protein;Parent=GCA008085315_00921_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148320783.1,SO:0001217,UniParc:UPI0011D3E0E9,UniRef:UniRef100_UPI0011D3E0E9,UniRef:UniRef50_UPI00022BFF13,UniRef:UniRef90_UPI00022BFF13 contig_12 Pyrodigal gene 241594 242742 . - . ID=GCA008085315_00922_gene;locus_tag=GCA008085315_00922 contig_12 Pyrodigal CDS 241594 242742 . - 0 ID=GCA008085315_00922;Name=tyrosine-type recombinase/integrase;locus_tag=GCA008085315_00922;product=tyrosine-type recombinase/integrase;Parent=GCA008085315_00922_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A379B1S0,UniRef:UniRef90_UPI001F16C79E contig_12 Pyrodigal gene 242948 244507 . - . ID=GCA008085315_00923_gene;locus_tag=GCA008085315_00923;gene=guaA contig_12 Pyrodigal CDS 242948 244507 . - 0 ID=GCA008085315_00923;Name=glutamine-hydrolyzing GMP synthase;locus_tag=GCA008085315_00923;product=glutamine-hydrolyzing GMP synthase;Dbxref=GO:0003921,GO:0003922,GO:0005524,GO:0005829,GO:0006177,GO:0016462;gene=guaA;Parent=GCA008085315_00923_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0519,COG:F,KEGG:K01951,RefSeq:WP_005545986.1,SO:0001217,UniParc:UPI0001B9F171,UniRef:UniRef100_UPI0001B9F171,UniRef:UniRef50_Q9RT91,UniRef:UniRef90_P44335;ec_number=6.3.5.2 contig_12 Pyrodigal gene 244539 244805 . - . ID=GCA008085315_00924_gene;locus_tag=GCA008085315_00924;gene=relE contig_12 Pyrodigal CDS 244539 244805 . - 0 ID=GCA008085315_00924;Name=Addiction module toxin RelE;locus_tag=GCA008085315_00924;product=Addiction module toxin RelE;gene=relE;Parent=GCA008085315_00924_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3041,COG:JV,KEGG:K19157,RefSeq:WP_005545988.1,SO:0001217,UniParc:UPI0001B9F172,UniRef:UniRef100_UPI0001B9F172,UniRef:UniRef50_A0A380N041,UniRef:UniRef90_A0A142FY83;ec_number=3.1.-.- contig_12 Pyrodigal gene 244817 245089 . - . ID=GCA008085315_00925_gene;locus_tag=GCA008085315_00925;gene=relB contig_12 Pyrodigal CDS 244817 245089 . - 0 ID=GCA008085315_00925;Name=Translation repressor RelB;locus_tag=GCA008085315_00925;product=Translation repressor RelB;gene=relB;Parent=GCA008085315_00925_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3077,COG:V,KEGG:K07473,RefSeq:WP_005545990.1,SO:0001217,UniParc:UPI0001B9F173,UniRef:UniRef100_UPI0001B9F173,UniRef:UniRef50_A0A5D0EP43,UniRef:UniRef90_A0A5D0EP43 contig_12 Pyrodigal gene 245344 246696 . - . ID=GCA008085315_00926_gene;locus_tag=GCA008085315_00926;gene=dcuC contig_12 Pyrodigal CDS 245344 246696 . - 0 ID=GCA008085315_00926;Name=anaerobic C4-dicarboxylate transporter DcuC;locus_tag=GCA008085315_00926;product=anaerobic C4-dicarboxylate transporter DcuC;Dbxref=GO:0015556,GO:0015740;gene=dcuC;Parent=GCA008085315_00926_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG3069,KEGG:K03326,RefSeq:WP_005545994.1,SO:0001217,UniParc:UPI0001B9F175,UniRef:UniRef100_UPI0001B9F175,UniRef:UniRef50_P0ABP3,UniRef:UniRef90_E6KY93 contig_12 tRNAscan-SE gene 246903 246979 . + . ID=GCA008085315_00927_gene;locus_tag=GCA008085315_00927;gene=trnfM contig_12 tRNAscan-SE tRNA 246903 246979 . + . ID=GCA008085315_00927;Name=tRNA-fMet(cat);locus_tag=GCA008085315_00927;product=tRNA-fMet(cat);gene=trnfM;anti_codon=cat;amino_acid=fMet;Parent=GCA008085315_00927_gene;inference=profile:tRNAscan:2.0;Note=SO:0000266 contig_12 Pyrodigal gene 247135 247590 . + . ID=GCA008085315_00928_gene;locus_tag=GCA008085315_00928;gene=rimP contig_12 Pyrodigal CDS 247135 247590 . + 0 ID=GCA008085315_00928;Name=ribosome maturation factor RimP;locus_tag=GCA008085315_00928;product=ribosome maturation factor RimP;Dbxref=GO:0042274;gene=rimP;Parent=GCA008085315_00928_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0779,COG:J,RefSeq:WP_005545995.1,SO:0001217,UniParc:UPI0001B9F176,UniRef:UniRef100_UPI0001B9F176,UniRef:UniRef50_Q21H59,UniRef:UniRef90_A0A142FXZ8 contig_12 Pyrodigal gene 247614 249110 . + . ID=GCA008085315_00929_gene;locus_tag=GCA008085315_00929;gene=nusA contig_12 Pyrodigal CDS 247614 249110 . + 0 ID=GCA008085315_00929;Name=Transcription termination/antitermination protein NusA;locus_tag=GCA008085315_00929;product=Transcription termination/antitermination protein NusA;gene=nusA;Parent=GCA008085315_00929_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0195,COG:K,RefSeq:WP_005545997.1,SO:0001217,UniParc:UPI0001B9F177,UniRef:UniRef100_UPI0001B9F177,UniRef:UniRef50_P0AFF6,UniRef:UniRef90_A0A142FXZ7 contig_12 Pyrodigal gene 249126 251615 . + . ID=GCA008085315_00930_gene;locus_tag=GCA008085315_00930;gene=infB contig_12 Pyrodigal CDS 249126 251615 . + 0 ID=GCA008085315_00930;Name=translation initiation factor IF-2;locus_tag=GCA008085315_00930;product=translation initiation factor IF-2;Dbxref=GO:0003743,GO:0003924,GO:0005525,GO:0005737,GO:0006413;gene=infB;Parent=GCA008085315_00930_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0532,COG:J,KEGG:K02519,RefSeq:WP_019518265.1,SO:0001217,UniParc:UPI00035E06EE,UniRef:UniRef100_UPI00035E06EE,UniRef:UniRef50_Q9KU80,UniRef:UniRef90_U1QXQ6 contig_12 Pyrodigal gene 251688 251978 . + . ID=GCA008085315_00931_gene;locus_tag=GCA008085315_00931 contig_12 Pyrodigal CDS 251688 251978 . + 0 ID=GCA008085315_00931;Name=MFS transporter;locus_tag=GCA008085315_00931;product=MFS transporter;Parent=GCA008085315_00931_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_019518264.1,SO:0001217,UniParc:UPI00037303D5,UniRef:UniRef100_A0AAC9F954,UniRef:UniRef50_A0AAC9F954,UniRef:UniRef90_A0AAC9F954 contig_12 Pyrodigal gene 252147 252533 . + . ID=GCA008085315_00932_gene;locus_tag=GCA008085315_00932;gene=rbfA contig_12 Pyrodigal CDS 252147 252533 . + 0 ID=GCA008085315_00932;Name=30S ribosome-binding factor RbfA;locus_tag=GCA008085315_00932;product=30S ribosome-binding factor RbfA;Dbxref=GO:0006364;gene=rbfA;Parent=GCA008085315_00932_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02834,RefSeq:WP_148320786.1,SO:0001217,UniParc:UPI0011D6427F,UniRef:UniRef100_UPI0011D6427F,UniRef:UniRef50_Q65SL1,UniRef:UniRef90_UPI0011D6427F contig_12 Pyrodigal gene 252533 253450 . + . ID=GCA008085315_00933_gene;locus_tag=GCA008085315_00933;gene=truB contig_12 Pyrodigal CDS 252533 253450 . + 0 ID=GCA008085315_00933;Name=tRNA pseudouridine(55) synthase TruB;locus_tag=GCA008085315_00933;product=tRNA pseudouridine(55) synthase TruB;Dbxref=GO:0001522,GO:0003723,GO:0009451,GO:0009982;gene=truB;Parent=GCA008085315_00933_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0130,COG:J,KEGG:K03177,RefSeq:WP_005546004.1,SO:0001217,UniParc:UPI0001B9F17A,UniRef:UniRef100_UPI0001B9F17A,UniRef:UniRef50_P60340,UniRef:UniRef90_E6KX61;ec_number=5.4.99.25 contig_12 Pyrodigal gene 253737 254348 . - . ID=GCA008085315_00934_gene;locus_tag=GCA008085315_00934;gene=phoE contig_12 Pyrodigal CDS 253737 254348 . - 0 ID=GCA008085315_00934;Name=Histidine phosphatase;locus_tag=GCA008085315_00934;product=Histidine phosphatase;gene=phoE;Parent=GCA008085315_00934_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0406,COG:G,RefSeq:WP_019518263.1,SO:0001217,UniParc:UPI0003821557,UniRef:UniRef100_UPI0003821557,UniRef:UniRef50_A0A5D0EK03,UniRef:UniRef90_A0A5D0EK03 contig_12 Infernal gene 254330 254427 . + . ID=GCA008085315_00935_gene;locus_tag=GCA008085315_00935;gene=AaHKsRNA22 contig_12 Infernal ncRNA 254330 254427 2.9e-12 + . ID=GCA008085315_00935;Name=Aggregatibacter sRNA 22;locus_tag=GCA008085315_00935;product=Aggregatibacter sRNA 22;Dbxref=RFAM:RF02902;Parent=GCA008085315_00935_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02902 contig_12 Pyrodigal gene 254475 255662 . - . ID=GCA008085315_00936_gene;locus_tag=GCA008085315_00936;gene=tyrS contig_12 Pyrodigal CDS 254475 255662 . - 0 ID=GCA008085315_00936;Name=tyrosine--tRNA ligase;locus_tag=GCA008085315_00936;product=tyrosine--tRNA ligase;Dbxref=GO:0000166,GO:0003723,GO:0004831,GO:0005524,GO:0005829,GO:0006437;gene=tyrS;Parent=GCA008085315_00936_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0162,COG:J,KEGG:K01866,RefSeq:WP_148320787.1,SO:0001217,UniParc:UPI0011D7A094,UniRef:UniRef100_UPI0011D7A094,UniRef:UniRef50_Q7VUW5,UniRef:UniRef90_Q9CMQ8;ec_number=6.1.1.1 contig_12 Pyrodigal gene 255910 256635 . - . ID=GCA008085315_00937_gene;locus_tag=GCA008085315_00937;gene=sfsA contig_12 Pyrodigal CDS 255910 256635 . - 0 ID=GCA008085315_00937;Name=DNA/RNA nuclease SfsA;locus_tag=GCA008085315_00937;product=DNA/RNA nuclease SfsA;Dbxref=GO:0003677;gene=sfsA;Parent=GCA008085315_00937_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1489,COG:GT,KEGG:K06206,RefSeq:WP_148320789.1,SO:0001217,UniParc:UPI0011DC355A,UniRef:UniRef100_UPI0011DC355A,UniRef:UniRef50_Q8ZRQ6,UniRef:UniRef90_A0A142FXZ0 contig_12 Pyrodigal gene 256929 258464 . + . ID=GCA008085315_00938_gene;locus_tag=GCA008085315_00938;gene=pntA contig_12 Pyrodigal CDS 256929 258464 . + 0 ID=GCA008085315_00938;Name=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;locus_tag=GCA008085315_00938;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;Dbxref=GO:0008750,GO:1902600;gene=pntA;Parent=GCA008085315_00938_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG3288,RefSeq:WP_005546011.1,SO:0001217,UniParc:UPI0001B9F1D1,UniRef:UniRef100_UPI0001B9F1D1,UniRef:UniRef50_P07001,UniRef:UniRef90_A0A0J5P5X6;ec_number=7.1.1.1 contig_12 Pyrodigal gene 258475 259899 . + . ID=GCA008085315_00939_gene;locus_tag=GCA008085315_00939;gene=pntB contig_12 Pyrodigal CDS 258475 259899 . + 0 ID=GCA008085315_00939;Name=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;locus_tag=GCA008085315_00939;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;Dbxref=GO:0008750,GO:0016020,GO:0050661;gene=pntB;Parent=GCA008085315_00939_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1282,KEGG:K00325,RefSeq:WP_005546013.1,SO:0001217,UniParc:UPI0001B9F1D2,UniRef:UniRef100_UPI0001B9F1D2,UniRef:UniRef50_C9QFN4,UniRef:UniRef90_A0A142FXY8;ec_number=7.1.1.1 contig_12 Pyrodigal gene 260080 260322 . + . ID=GCA008085315_00940_gene;locus_tag=GCA008085315_00940 contig_12 Pyrodigal CDS 260080 260322 . + 0 ID=GCA008085315_00940;Name=DNA repair protein;locus_tag=GCA008085315_00940;product=DNA repair protein;Parent=GCA008085315_00940_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005546015.1,SO:0001217,UniParc:UPI0001B9F1D3,UniRef:UniRef100_UPI0001B9F1D3,UniRef:UniRef50_A0A142FXY7,UniRef:UniRef90_A0A142FXY7 contig_12 Pyrodigal gene 260293 260454 . - . ID=GCA008085315_00941_gene;locus_tag=GCA008085315_00941 contig_12 Pyrodigal CDS 260293 260454 . - 0 ID=GCA008085315_00941;Name=hypothetical protein;locus_tag=GCA008085315_00941;product=hypothetical protein;Parent=GCA008085315_00941_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005546017.1,SO:0001217,UniParc:UPI0001B9F1D4,UniRef:UniRef100_UPI0001B9F1D4,UniRef:UniRef50_G4A7D3,UniRef:UniRef90_G4A7D3 contig_12 Pyrodigal gene 260923 261771 . + . ID=GCA008085315_00942_gene;locus_tag=GCA008085315_00942 contig_12 Pyrodigal CDS 260923 261771 . + 0 ID=GCA008085315_00942;Name=Cell filamentation protein Fic;locus_tag=GCA008085315_00942;product=Cell filamentation protein Fic;Parent=GCA008085315_00942_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3177,COG:K,RefSeq:WP_005546018.1,SO:0001217,UniParc:UPI0001B9F1D5,UniRef:UniRef100_UPI0001B9F1D5,UniRef:UniRef50_A0A1X9ZDR8,UniRef:UniRef90_A0A142FXY6 contig_12 Pyrodigal gene 262283 263392 . + . ID=GCA008085315_00943_gene;locus_tag=GCA008085315_00943;gene=selD contig_12 Pyrodigal CDS 262283 263392 . + 0 ID=GCA008085315_00943;Name=selenide%2C water dikinase SelD;locus_tag=GCA008085315_00943;product=selenide%2C water dikinase SelD;Dbxref=GO:0004756,GO:0016260;gene=selD;Parent=GCA008085315_00943_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0709,COG:E,KEGG:K01008,SO:0001217,UniRef:UniRef50_Q8ZEK1,UniRef:UniRef90_A0A5D0ELU0;ec_number=2.7.9.3 contig_12 Pyrodigal gene 263630 264700 . + . ID=GCA008085315_00944_gene;locus_tag=GCA008085315_00944 contig_12 Pyrodigal CDS 263630 264700 . + 0 ID=GCA008085315_00944;Name=ABC transporter ATP-binding protein;locus_tag=GCA008085315_00944;product=ABC transporter ATP-binding protein;Parent=GCA008085315_00944_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005546022.1,SO:0001217,UniParc:UPI0001B9F1D7,UniRef:UniRef100_UPI0001B9F1D7,UniRef:UniRef50_A0A6G8JH15,UniRef:UniRef90_A0A5D0EL65 contig_12 Pyrodigal gene 264697 265566 . + . ID=GCA008085315_00945_gene;locus_tag=GCA008085315_00945;gene=potB contig_12 Pyrodigal CDS 264697 265566 . + 0 ID=GCA008085315_00945;Name=Spermidine/putrescine ABC transporter membrane protein;locus_tag=GCA008085315_00945;product=Spermidine/putrescine ABC transporter membrane protein;gene=potB;Parent=GCA008085315_00945_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1176,COG:E,RefSeq:WP_005546023.1,SO:0001217,UniParc:UPI0001B9F1D8,UniRef:UniRef100_UPI0001B9F1D8,UniRef:UniRef50_A0A084A2Q8,UniRef:UniRef90_A0A377IX33 contig_12 Pyrodigal gene 265563 266414 . + . ID=GCA008085315_00946_gene;locus_tag=GCA008085315_00946;gene=potC contig_12 Pyrodigal CDS 265563 266414 . + 0 ID=GCA008085315_00946;Name=PotC protein;locus_tag=GCA008085315_00946;product=PotC protein;gene=potC;Parent=GCA008085315_00946_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1177,COG:E,RefSeq:WP_019518262.1,SO:0001217,UniParc:UPI00036C1E5E,UniRef:UniRef100_UPI00036C1E5E,UniRef:UniRef50_A0A2I5HPF5,UniRef:UniRef90_Q65V22 contig_12 Pyrodigal gene 266434 267525 . + . ID=GCA008085315_00947_gene;locus_tag=GCA008085315_00947;gene=ynjB contig_12 Pyrodigal CDS 266434 267525 . + 0 ID=GCA008085315_00947;Name=Extracellular solute-binding protein;locus_tag=GCA008085315_00947;product=Extracellular solute-binding protein;gene=ynjB;Parent=GCA008085315_00947_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4134,COG:R,RefSeq:WP_005546027.1,SO:0001217,UniParc:UPI0001B9F1DA,UniRef:UniRef100_UPI0001B9F1DA,UniRef:UniRef50_Q65V23,UniRef:UniRef90_A0A142FXY2 contig_12 Infernal gene 267587 267686 . + . ID=GCA008085315_00948_gene;locus_tag=GCA008085315_00948;gene=AaHKsRNA22 contig_12 Infernal ncRNA 267587 267686 8.8e-12 + . ID=GCA008085315_00948;Name=Aggregatibacter sRNA 22;locus_tag=GCA008085315_00948;product=Aggregatibacter sRNA 22;Dbxref=RFAM:RF02902;Parent=GCA008085315_00948_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02902 contig_12 Pyrodigal gene 267910 269739 . - . ID=GCA008085315_00949_gene;locus_tag=GCA008085315_00949;gene=uvrC contig_12 Pyrodigal CDS 267910 269739 . - 0 ID=GCA008085315_00949;Name=excinuclease ABC subunit UvrC;locus_tag=GCA008085315_00949;product=excinuclease ABC subunit UvrC;Dbxref=GO:0006289,GO:0009380,GO:0009381;gene=uvrC;Parent=GCA008085315_00949_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0322,COG:L,KEGG:K03703,RefSeq:WP_148320794.1,SO:0001217,UniParc:UPI0011DA39AA,UniRef:UniRef100_UPI0011DA39AA,UniRef:UniRef50_P57882,UniRef:UniRef90_A0A5D0EJS7 contig_12 Pyrodigal gene 269878 270651 . - . ID=GCA008085315_00950_gene;locus_tag=GCA008085315_00950;gene=kdsB contig_12 Pyrodigal CDS 269878 270651 . - 0 ID=GCA008085315_00950;Name=3-deoxy-manno-octulosonate cytidylyltransferase;locus_tag=GCA008085315_00950;product=3-deoxy-manno-octulosonate cytidylyltransferase;Dbxref=GO:0008690,GO:0009244;gene=kdsB;Parent=GCA008085315_00950_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1212,COG:M,KEGG:K00979,RefSeq:WP_148320796.1,SO:0001217,UniParc:UPI0011D9BC5E,UniRef:UniRef100_UPI0011D9BC5E,UniRef:UniRef50_P44490,UniRef:UniRef90_A0A142FXY0;ec_number=2.7.7.38 contig_12 Pyrodigal gene 270653 270832 . - . ID=GCA008085315_00951_gene;locus_tag=GCA008085315_00951;gene=trm112 contig_12 Pyrodigal CDS 270653 270832 . - 0 ID=GCA008085315_00951;Name=UPF0434 protein ACT75_01300;locus_tag=GCA008085315_00951;product=UPF0434 protein ACT75_01300;gene=trm112;Parent=GCA008085315_00951_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2835,COG:J,RefSeq:WP_005546524.1,SO:0001217,UniParc:UPI0001B9F1DD,UniRef:UniRef100_UPI0001B9F1DD,UniRef:UniRef50_Q8EDF2,UniRef:UniRef90_A0A142FXX9 contig_12 Pyrodigal gene 270854 271828 . - . ID=GCA008085315_00952_gene;locus_tag=GCA008085315_00952;gene=lpxK contig_12 Pyrodigal CDS 270854 271828 . - 0 ID=GCA008085315_00952;Name=tetraacyldisaccharide 4'-kinase;locus_tag=GCA008085315_00952;product=tetraacyldisaccharide 4'-kinase;Dbxref=GO:0009029,GO:0009245;gene=lpxK;Parent=GCA008085315_00952_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1663,COG:M,KEGG:K00912,RefSeq:WP_148333960.1,SO:0001217,UniParc:UPI0011D62996,UniRef:UniRef100_UPI0011D62996,UniRef:UniRef50_Q65U20,UniRef:UniRef90_A0A5D0EMD9;ec_number=2.7.1.130 contig_12 Pyrodigal gene 271847 273595 . - . ID=GCA008085315_00953_gene;locus_tag=GCA008085315_00953;gene=msbA contig_12 Pyrodigal CDS 271847 273595 . - 0 ID=GCA008085315_00953;Name=lipid A ABC transporter ATP-binding protein/permease MsbA;locus_tag=GCA008085315_00953;product=lipid A ABC transporter ATP-binding protein/permease MsbA;Dbxref=GO:0005524,GO:0016020,GO:0034040,GO:0055085,GO:0140359;gene=msbA;Parent=GCA008085315_00953_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1132,COG:V,RefSeq:WP_005546521.1,SO:0001217,UniParc:UPI0001B9F1DF,UniRef:UniRef100_UPI0001B9F1DF,UniRef:UniRef50_P60752,UniRef:UniRef90_A0A336N734;ec_number=7.5.2.5 contig_12 Pyrodigal gene 273642 274823 . - . ID=GCA008085315_00954_gene;locus_tag=GCA008085315_00954 contig_12 Pyrodigal CDS 273642 274823 . - 0 ID=GCA008085315_00954;Name=Recombination protein 2;locus_tag=GCA008085315_00954;product=Recombination protein 2;Parent=GCA008085315_00954_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A2X1Q2J3 contig_12 Pyrodigal gene 274775 275929 . - . ID=GCA008085315_00955_gene;locus_tag=GCA008085315_00955 contig_12 Pyrodigal CDS 274775 275929 . - 0 ID=GCA008085315_00955;Name=DNA internalization competence protein ComEC/Rec2-like protein;locus_tag=GCA008085315_00955;product=DNA internalization competence protein ComEC/Rec2-like protein;Parent=GCA008085315_00955_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_I3D9G5 contig_12 Pyrodigal gene 276356 276793 . + . ID=GCA008085315_00956_gene;locus_tag=GCA008085315_00956;gene=dksA contig_12 Pyrodigal CDS 276356 276793 . + 0 ID=GCA008085315_00956;Name=RNA polymerase-binding protein DksA;locus_tag=GCA008085315_00956;product=RNA polymerase-binding protein DksA;Dbxref=GO:0006355,GO:0008270,GO:0019899;gene=dksA;Parent=GCA008085315_00956_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1734,COG:K,RefSeq:WP_005542366.1,SO:0001217,UniParc:UPI0001B9F1E1,UniRef:UniRef100_A0A142FXX5,UniRef:UniRef50_A0A0K1N402,UniRef:UniRef90_A0A142FXX5 contig_12 Pyrodigal gene 276910 278376 . + . ID=GCA008085315_00957_gene;locus_tag=GCA008085315_00957;gene=pcnB contig_12 Pyrodigal CDS 276910 278376 . + 0 ID=GCA008085315_00957;Name=Poly(A) polymerase I;locus_tag=GCA008085315_00957;product=Poly(A) polymerase I;gene=pcnB;Parent=GCA008085315_00957_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0617,COG:J,KEGG:K00970,RefSeq:WP_019518259.1,SO:0001217,UniParc:UPI00034DBFBE,UniRef:UniRef100_UPI00034DBFBE,UniRef:UniRef50_W0Q7T4,UniRef:UniRef90_E6KXA3;ec_number=2.7.7.19 contig_12 Pyrodigal gene 278369 278869 . + . ID=GCA008085315_00958_gene;locus_tag=GCA008085315_00958;gene=folK contig_12 Pyrodigal CDS 278369 278869 . + 0 ID=GCA008085315_00958;Name=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;locus_tag=GCA008085315_00958;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;Dbxref=GO:0003848,GO:0009396;gene=folK;Parent=GCA008085315_00958_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0801,COG:H,RefSeq:WP_005550118.1,SO:0001217,UniParc:UPI0001CA7797,UniRef:UniRef100_A0A5D0EJU0,UniRef:UniRef50_P43777,UniRef:UniRef90_A0A5D0EJU0;ec_number=2.7.6.3 contig_12 Pyrodigal gene 278940 279302 . - . ID=GCA008085315_00959_gene;locus_tag=GCA008085315_00959 contig_12 Pyrodigal CDS 278940 279302 . - 0 ID=GCA008085315_00959;Name=Cupin;locus_tag=GCA008085315_00959;product=Cupin;Parent=GCA008085315_00959_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005542369.1,SO:0001217,UniParc:UPI0001B9F1E3,UniRef:UniRef100_A0A5D0EJT9,UniRef:UniRef50_I2NMS2,UniRef:UniRef90_A0A5D0EJT9 contig_12 Pyrodigal gene 279649 281784 . - . ID=GCA008085315_00960_gene;locus_tag=GCA008085315_00960;gene=pta contig_12 Pyrodigal CDS 279649 281784 . - 0 ID=GCA008085315_00960;Name=phosphate acetyltransferase;locus_tag=GCA008085315_00960;product=phosphate acetyltransferase;Dbxref=GO:0016407;gene=pta;Parent=GCA008085315_00960_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0857,COG:R,KEGG:K13788,RefSeq:WP_148320798.1,SO:0001217,UniParc:UPI0011D5C0E2,UniRef:UniRef100_UPI0011D5C0E2,UniRef:UniRef50_P0A9M8,UniRef:UniRef90_U1S7L7;ec_number=2.3.1.8 contig_12 Pyrodigal gene 281854 283056 . - . ID=GCA008085315_00961_gene;locus_tag=GCA008085315_00961;gene=ackA contig_12 Pyrodigal CDS 281854 283056 . - 0 ID=GCA008085315_00961;Name=Acetate kinase;locus_tag=GCA008085315_00961;product=Acetate kinase;Dbxref=GO:0000287,GO:0005524,GO:0005829,GO:0006083,GO:0006085,GO:0008776;gene=ackA;Parent=GCA008085315_00961_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0282,KEGG:K00925,RefSeq:WP_005542371.1,SO:0001217,UniParc:UPI00022ABA57,UniRef:UniRef100_A0A142FXX0,UniRef:UniRef50_P63411,UniRef:UniRef90_Q65TV4;ec_number=2.7.2.1 contig_12 Pyrodigal gene 283324 283767 . + . ID=GCA008085315_00962_gene;locus_tag=GCA008085315_00962;gene=yfbV contig_12 Pyrodigal CDS 283324 283767 . + 0 ID=GCA008085315_00962;Name=terminus macrodomain insulation protein YfbV;locus_tag=GCA008085315_00962;product=terminus macrodomain insulation protein YfbV;gene=yfbV;Parent=GCA008085315_00962_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3092,COG:S,KEGG:K09899,RefSeq:WP_005542372.1,SO:0001217,UniParc:UPI0001B9F1E6,UniRef:UniRef100_A0A5D0EME0,UniRef:UniRef50_P44127,UniRef:UniRef90_A0A5D0EME0 contig_12 Pyrodigal gene 283946 284488 . + . ID=GCA008085315_00963_gene;locus_tag=GCA008085315_00963;gene=cvpA contig_12 Pyrodigal CDS 283946 284488 . + 0 ID=GCA008085315_00963;Name=Colicin V synthesis protein;locus_tag=GCA008085315_00963;product=Colicin V synthesis protein;gene=cvpA;Parent=GCA008085315_00963_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1286,COG:FM,RefSeq:WP_148320800.1,SO:0001217,UniParc:UPI0011D89548,UniRef:UniRef100_UPI0011D89548,UniRef:UniRef50_P45108,UniRef:UniRef90_A0A5D0ELT4 ##sequence-region contig_13 1 3592 contig_13 Bakta region 1 3592 . + . ID=contig_13;Name=contig_13 contig_13 Infernal gene 1 99 . - . ID=GCA008085315_00964_gene;locus_tag=GCA008085315_00964;gene=rrf;pseudo=True contig_13 Infernal rRNA 1 99 1.3e-08 - . ID=GCA008085315_00964;Name=5S ribosomal RNA;locus_tag=GCA008085315_00964;gene=rrf;product=5S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00001;pseudo=True;Parent=GCA008085315_00964_gene;Note=KEGG:K01985,SO:0000652;inference=profile:Rfam:RF00001 contig_13 Infernal gene 382 3404 . - . ID=GCA008085315_00965_gene;locus_tag=GCA008085315_00965;gene=rrl contig_13 Infernal rRNA 382 3404 4.3e-06 - . ID=GCA008085315_00965;Name=23S ribosomal RNA;locus_tag=GCA008085315_00965;gene=rrl;product=23S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF02541;Parent=GCA008085315_00965_gene;Note=KEGG:K01980,SO:0001001;inference=profile:Rfam:RF02541 ##sequence-region contig_14 1 1754 contig_14 Bakta region 1 1754 . + . ID=contig_14;Name=contig_14 contig_14 Infernal gene 155 1694 . + . ID=GCA008085315_00966_gene;locus_tag=GCA008085315_00966;gene=rrs contig_14 Infernal rRNA 155 1694 2.4e-46 + . ID=GCA008085315_00966;Name=16S ribosomal RNA;locus_tag=GCA008085315_00966;gene=rrs;product=16S ribosomal RNA;Dbxref=GO:0005840,GO:0003735,RFAM:RF00177;Parent=GCA008085315_00966_gene;Note=KEGG:K01977,SO:0001000;inference=profile:Rfam:RF00177 ##sequence-region contig_15 1 1606 contig_15 Bakta region 1 1606 . + . ID=contig_15;Name=contig_15 contig_15 Pyrodigal gene 495 728 . + . ID=GCA008085315_00967_gene;locus_tag=GCA008085315_00967 contig_15 Pyrodigal CDS 495 728 . + 0 ID=GCA008085315_00967;Name=hypothetical protein;locus_tag=GCA008085315_00967;product=hypothetical protein;Parent=GCA008085315_00967_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_233443276.1,SO:0001217,UniParc:UPI001F3EB303,UniRef:UniRef100_UPI001F3EB303,UniRef:UniRef50_UPI001F3EB303,UniRef:UniRef90_UPI001F3EB303 ##sequence-region contig_16 1 1150 contig_16 Bakta region 1 1150 . + . ID=contig_16;Name=contig_16 ##sequence-region contig_17 1 689 contig_17 Bakta region 1 689 . + . ID=contig_17;Name=contig_17 contig_17 Pyrodigal gene 8 658 . + . ID=GCA008085315_00968_gene;locus_tag=GCA008085315_00968;gene=insO contig_17 Pyrodigal CDS 8 658 . + 0 ID=GCA008085315_00968;Name=IS3 family transposase;locus_tag=GCA008085315_00968;product=IS3 family transposase;Dbxref=GO:0004803;gene=insO;Parent=GCA008085315_00968_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2801,COG:X,RefSeq:WP_151294747.1,SO:0001217,UniParc:UPI0002F742F5,UniRef:UniRef100_UPI0018D7D154,UniRef:UniRef50_A0AAC8Y1K5,UniRef:UniRef90_A0AAC8Y1K5 ##sequence-region contig_18 1 221501 contig_18 Bakta region 1 221501 . + . ID=contig_18;Name=contig_18 contig_18 Pyrodigal gene 179 328 . - . ID=GCA008085315_00969_gene;locus_tag=GCA008085315_00969;pseudogene=unitary contig_18 Pyrodigal CDS 179 328 . - 0 ID=GCA008085315_00969;Name=helix-turn-helix domain-containing protein;locus_tag=GCA008085315_00969;product=helix-turn-helix domain-containing protein;pseudogene=unitary;Parent=GCA008085315_00969_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_UPI0011D82968,UniRef:UniRef90_UPI0011D82968 contig_18 Pyrodigal gene 280 429 . - . ID=GCA008085315_00970_gene;locus_tag=GCA008085315_00970 contig_18 Pyrodigal CDS 280 429 . - 0 ID=GCA008085315_00970;Name=hypothetical protein;locus_tag=GCA008085315_00970;product=hypothetical protein;Parent=GCA008085315_00970_gene;inference=ab initio prediction:Pyrodigal:3.5 contig_18 Pyrodigal gene 580 2217 . + . ID=GCA008085315_00971_gene;locus_tag=GCA008085315_00971;gene=sfcA contig_18 Pyrodigal CDS 580 2217 . + 0 ID=GCA008085315_00971;Name=Malate oxidoreductase;locus_tag=GCA008085315_00971;product=Malate oxidoreductase;gene=sfcA;Parent=GCA008085315_00971_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0281,RefSeq:WP_005568596.1,SO:0001217,UniParc:UPI0001B9F38E,UniRef:UniRef100_UPI0001B9F38E,UniRef:UniRef50_D5P7R1,UniRef:UniRef90_F2BC08 contig_18 Pyrodigal gene 2437 3636 . - . ID=GCA008085315_00972_gene;locus_tag=GCA008085315_00972;gene=yhiN contig_18 Pyrodigal CDS 2437 3636 . - 0 ID=GCA008085315_00972;Name=NAD(P)/FAD-dependent oxidoreductase;locus_tag=GCA008085315_00972;product=NAD(P)/FAD-dependent oxidoreductase;gene=yhiN;Parent=GCA008085315_00972_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2081,COG:R,RefSeq:WP_005546539.1,SO:0001217,UniParc:UPI0001B9F38F,UniRef:UniRef100_UPI0001B9F38F,UniRef:UniRef50_A0A090V3N6,UniRef:UniRef90_A0A142FYV4 contig_18 Pyrodigal gene 3633 4682 . - . ID=GCA008085315_00973_gene;locus_tag=GCA008085315_00973;gene=nrfF contig_18 Pyrodigal CDS 3633 4682 . - 0 ID=GCA008085315_00973;Name=heme lyase NrfEFG subunit NrfF;locus_tag=GCA008085315_00973;product=heme lyase NrfEFG subunit NrfF;gene=nrfF;Parent=GCA008085315_00973_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CO,COG:COG4235,RefSeq:WP_005546537.1,SO:0001217,UniParc:UPI0001B9F3FE,UniRef:UniRef100_UPI0001B9F3FE,UniRef:UniRef50_P44942,UniRef:UniRef90_Q5I6T9 contig_18 Pyrodigal gene 4679 5209 . - . ID=GCA008085315_00974_gene;locus_tag=GCA008085315_00974;gene=trxA contig_18 Pyrodigal CDS 4679 5209 . - 0 ID=GCA008085315_00974;Name=Thiol:disulfide oxidoreductase DsbE;locus_tag=GCA008085315_00974;product=Thiol:disulfide oxidoreductase DsbE;gene=trxA;Parent=GCA008085315_00974_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0526,COG:O,RefSeq:WP_012821113.1,SO:0001217,UniParc:UPI0001B9F3FF,UniRef:UniRef100_UPI0001B9F3FF,UniRef:UniRef50_P44943,UniRef:UniRef90_E6KW59 contig_18 Pyrodigal gene 5202 7112 . - . ID=GCA008085315_00975_gene;locus_tag=GCA008085315_00975;gene=ccmF contig_18 Pyrodigal CDS 5202 7112 . - 0 ID=GCA008085315_00975;Name=Cytochrome C biogenesis protein CcmF;locus_tag=GCA008085315_00975;product=Cytochrome C biogenesis protein CcmF;gene=ccmF;Parent=GCA008085315_00975_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CO,COG:COG1138,KEGG:K04016,RefSeq:WP_005568601.1,SO:0001217,UniParc:UPI00022AC86B,UniRef:UniRef100_UPI00022AC86B,UniRef:UniRef50_P44944,UniRef:UniRef90_A0A5D0ENL9 contig_18 Pyrodigal gene 7699 8664 . - . ID=GCA008085315_00976_gene;locus_tag=GCA008085315_00976;gene=nrfD contig_18 Pyrodigal CDS 7699 8664 . - 0 ID=GCA008085315_00976;Name=cytochrome c nitrite reductase subunit NrfD;locus_tag=GCA008085315_00976;product=cytochrome c nitrite reductase subunit NrfD;gene=nrfD;Parent=GCA008085315_00976_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3301,COG:P,KEGG:K04015,RefSeq:WP_005547395.1,SO:0001217,UniParc:UPI0001B9F402,UniRef:UniRef100_UPI0001B9F402,UniRef:UniRef50_P45014,UniRef:UniRef90_A0A142FYV8;ec_number=1.7.2.2 contig_18 Pyrodigal gene 8661 9338 . - . ID=GCA008085315_00977_gene;locus_tag=GCA008085315_00977;gene=nrfC contig_18 Pyrodigal CDS 8661 9338 . - 0 ID=GCA008085315_00977;Name=cytochrome c nitrite reductase Fe-S protein;locus_tag=GCA008085315_00977;product=cytochrome c nitrite reductase Fe-S protein;Dbxref=GO:0016491,GO:0046872,GO:0051539;gene=nrfC;Parent=GCA008085315_00977_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0437,KEGG:K04014,RefSeq:WP_005547396.1,SO:0001217,UniParc:UPI0001B9F403,UniRef:UniRef100_UPI0001B9F403,UniRef:UniRef50_P0AAK7,UniRef:UniRef90_P45015;ec_number=1.7.2.2 contig_18 Pyrodigal gene 9335 10000 . - . ID=GCA008085315_00978_gene;locus_tag=GCA008085315_00978;gene=nrfB contig_18 Pyrodigal CDS 9335 10000 . - 0 ID=GCA008085315_00978;Name=cytochrome c nitrite reductase pentaheme subunit;locus_tag=GCA008085315_00978;product=cytochrome c nitrite reductase pentaheme subunit;Dbxref=GO:0008152,GO:0042597;gene=nrfB;Parent=GCA008085315_00978_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005547398.1,SO:0001217,UniParc:UPI0001B9F404,UniRef:UniRef100_UPI0001B9F404,UniRef:UniRef50_P45016,UniRef:UniRef90_A0A5D0ENM0;ec_number=1.7.2.2 contig_18 Pyrodigal gene 10074 11597 . - . ID=GCA008085315_00979_gene;locus_tag=GCA008085315_00979;gene=nrfA contig_18 Pyrodigal CDS 10074 11597 . - 0 ID=GCA008085315_00979;Name=ammonia-forming nitrite reductase cytochrome c552 subunit;locus_tag=GCA008085315_00979;product=ammonia-forming nitrite reductase cytochrome c552 subunit;Dbxref=GO:0005509,GO:0008152,GO:0020037,GO:0042279,GO:0042597;gene=nrfA;Parent=GCA008085315_00979_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3303,COG:P,RefSeq:WP_187374051.1,SO:0001217,UniParc:UPI001651CB50,UniRef:UniRef100_UPI001651CB50,UniRef:UniRef50_Q9CPL4,UniRef:UniRef90_A0A1V3J439;ec_number=1.7.2.2 contig_18 Pyrodigal gene 11902 12003 . + . ID=GCA008085315_00980_gene;locus_tag=GCA008085315_00980 contig_18 Pyrodigal CDS 11902 12003 . + 0 ID=GCA008085315_00980;Name=hypothetical protein;locus_tag=GCA008085315_00980;product=hypothetical protein;Parent=GCA008085315_00980_gene;inference=ab initio prediction:Pyrodigal:3.5 contig_18 Infernal gene 12075 12172 . - . ID=GCA008085315_00981_gene;locus_tag=GCA008085315_00981;gene=AaHKsRNA22 contig_18 Infernal ncRNA 12075 12172 2.3e-06 - . ID=GCA008085315_00981;Name=Aggregatibacter sRNA 22;locus_tag=GCA008085315_00981;product=Aggregatibacter sRNA 22;Dbxref=RFAM:RF02902;Parent=GCA008085315_00981_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02902 contig_18 Pyrodigal gene 12174 12464 . - . ID=GCA008085315_00982_gene;locus_tag=GCA008085315_00982 contig_18 Pyrodigal CDS 12174 12464 . - 0 ID=GCA008085315_00982;Name=Lipoprotein;locus_tag=GCA008085315_00982;product=Lipoprotein;Parent=GCA008085315_00982_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005547402.1,SO:0001217,UniParc:UPI0000E1B8D0,UniRef:UniRef100_UPI0000E1B8D0,UniRef:UniRef50_A0A5D0ENN9,UniRef:UniRef90_A0A5D0ENN9 contig_18 Pyrodigal gene 12482 12850 . - . ID=GCA008085315_00983_gene;locus_tag=GCA008085315_00983;pseudogene=unitary contig_18 Pyrodigal CDS 12482 12850 . - 0 ID=GCA008085315_00983;Name=Lipoprotein;locus_tag=GCA008085315_00983;product=Lipoprotein;pseudogene=unitary;Parent=GCA008085315_00983_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A336N7M8,UniRef:UniRef90_G4AA95 contig_18 Pyrodigal gene 12899 13108 . - . ID=GCA008085315_00984_gene;locus_tag=GCA008085315_00984 contig_18 Pyrodigal CDS 12899 13108 . - 0 ID=GCA008085315_00984;Name=hypothetical protein;locus_tag=GCA008085315_00984;product=hypothetical protein;Parent=GCA008085315_00984_gene;inference=ab initio prediction:Pyrodigal:3.5 contig_18 Pyrodigal gene 13240 14163 . - . ID=GCA008085315_00985_gene;locus_tag=GCA008085315_00985;gene=ccmI contig_18 Pyrodigal CDS 13240 14163 . - 0 ID=GCA008085315_00985;Name=C-type cytochrome biogenesis protein CcmI;locus_tag=GCA008085315_00985;product=C-type cytochrome biogenesis protein CcmI;gene=ccmI;Parent=GCA008085315_00985_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CO,COG:COG4235,RefSeq:WP_005568059.1,SO:0001217,UniParc:UPI0001B9F407,UniRef:UniRef100_UPI0001B9F407,UniRef:UniRef50_A0A2V0S8Z9,UniRef:UniRef90_A0A142FYW4 contig_18 Pyrodigal gene 14163 14714 . - . ID=GCA008085315_00986_gene;locus_tag=GCA008085315_00986;gene=nrfF contig_18 Pyrodigal CDS 14163 14714 . - 0 ID=GCA008085315_00986;Name=Cytochrome c-type biogenesis protein;locus_tag=GCA008085315_00986;product=Cytochrome c-type biogenesis protein;gene=nrfF;Parent=GCA008085315_00986_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CO,COG:COG3088,RefSeq:WP_233443270.1,SO:0001217,UniParc:UPI001F204947,UniRef:UniRef100_UPI001F204947,UniRef:UniRef50_A0A263HCI0,UniRef:UniRef90_G4AA93 contig_18 Infernal gene 14603 14704 . + . ID=GCA008085315_00987_gene;locus_tag=GCA008085315_00987;gene=AaHKsRNA22 contig_18 Infernal ncRNA 14603 14704 1.7e-12 + . ID=GCA008085315_00987;Name=Aggregatibacter sRNA 22;locus_tag=GCA008085315_00987;product=Aggregatibacter sRNA 22;Dbxref=RFAM:RF02902;Parent=GCA008085315_00987_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02902 contig_18 Pyrodigal gene 14714 15259 . - . ID=GCA008085315_00988_gene;locus_tag=GCA008085315_00988;gene=trxA contig_18 Pyrodigal CDS 14714 15259 . - 0 ID=GCA008085315_00988;Name=Thiol:disulfide interchange protein;locus_tag=GCA008085315_00988;product=Thiol:disulfide interchange protein;gene=trxA;Parent=GCA008085315_00988_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0526,COG:O,RefSeq:WP_005542796.1,SO:0001217,UniParc:UPI0001B9F409,UniRef:UniRef100_A0A142FYW6,UniRef:UniRef50_P45038,UniRef:UniRef90_A0A142FYW6 contig_18 Pyrodigal gene 15288 17246 . - . ID=GCA008085315_00989_gene;locus_tag=GCA008085315_00989;gene=ccmF contig_18 Pyrodigal CDS 15288 17246 . - 0 ID=GCA008085315_00989;Name=Cytochrome c biogenesis protein CcmF;locus_tag=GCA008085315_00989;product=Cytochrome c biogenesis protein CcmF;gene=ccmF;Parent=GCA008085315_00989_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CO,COG:COG1138,RefSeq:WP_005568055.1,SO:0001217,UniParc:UPI00022AC84D,UniRef:UniRef100_UPI00022AC84D,UniRef:UniRef50_P33927,UniRef:UniRef90_E6KW50 contig_18 Pyrodigal gene 17246 17764 . - . ID=GCA008085315_00990_gene;locus_tag=GCA008085315_00990;gene=ccmE contig_18 Pyrodigal CDS 17246 17764 . - 0 ID=GCA008085315_00990;Name=cytochrome c maturation protein CcmE;locus_tag=GCA008085315_00990;product=cytochrome c maturation protein CcmE;Dbxref=GO:0005886,GO:0017004,GO:0020037;gene=ccmE;Parent=GCA008085315_00990_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CO,COG:COG2332,KEGG:K02197,RefSeq:WP_005547412.1,SO:0001217,UniParc:UPI0001B9F40B,UniRef:UniRef100_UPI0001B9F40B,UniRef:UniRef50_P45036,UniRef:UniRef90_A0A142FYW8 contig_18 Pyrodigal gene 17761 17967 . - . ID=GCA008085315_00991_gene;locus_tag=GCA008085315_00991;gene=ccmD contig_18 Pyrodigal CDS 17761 17967 . - 0 ID=GCA008085315_00991;Name=heme exporter protein CcmD;locus_tag=GCA008085315_00991;product=heme exporter protein CcmD;Dbxref=GO:0015886,GO:0016020,GO:0017004;gene=ccmD;Parent=GCA008085315_00991_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3114,COG:U,RefSeq:WP_005574716.1,SO:0001217,UniParc:UPI0001B9F40C,UniRef:UniRef100_UPI0001B9F40C,UniRef:UniRef50_A0A448TUE6,UniRef:UniRef90_A0A142FYW9;ec_number=7.6.2.- contig_18 Pyrodigal gene 17985 18722 . - . ID=GCA008085315_00992_gene;locus_tag=GCA008085315_00992;gene=ccmC contig_18 Pyrodigal CDS 17985 18722 . - 0 ID=GCA008085315_00992;Name=Heme exporter protein C;locus_tag=GCA008085315_00992;product=Heme exporter protein C;gene=ccmC;Parent=GCA008085315_00992_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0755,COG:O,KEGG:K02195,RefSeq:WP_005547415.1,SO:0001217,UniParc:UPI0001B9F40D,UniRef:UniRef100_UPI0001B9F40D,UniRef:UniRef50_P45034,UniRef:UniRef90_E6KW47 contig_18 Pyrodigal gene 18733 19398 . - . ID=GCA008085315_00993_gene;locus_tag=GCA008085315_00993;gene=ccmB contig_18 Pyrodigal CDS 18733 19398 . - 0 ID=GCA008085315_00993;Name=heme exporter protein CcmB;locus_tag=GCA008085315_00993;product=heme exporter protein CcmB;Dbxref=GO:0015232,GO:0015886;gene=ccmB;Parent=GCA008085315_00993_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2386,COG:O,KEGG:K02194,RefSeq:WP_005547417.1,SO:0001217,UniParc:UPI0001B9F40E,UniRef:UniRef100_UPI0001B9F40E,UniRef:UniRef50_P0ABL8,UniRef:UniRef90_A0A0K1N221;ec_number=7.6.2.- contig_18 Pyrodigal gene 19403 20038 . - . ID=GCA008085315_00994_gene;locus_tag=GCA008085315_00994;gene=ccmA contig_18 Pyrodigal CDS 19403 20038 . - 0 ID=GCA008085315_00994;Name=cytochrome c biogenesis heme-transporting ATPase CcmA;locus_tag=GCA008085315_00994;product=cytochrome c biogenesis heme-transporting ATPase CcmA;Dbxref=GO:0005524,GO:0017004,GO:0022857;gene=ccmA;Parent=GCA008085315_00994_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4133,COG:O,RefSeq:WP_005547419.1,SO:0001217,UniParc:UPI0001B9F40F,UniRef:UniRef100_UPI0001B9F40F,UniRef:UniRef50_P45032,UniRef:UniRef90_A0A5D0ENM9;ec_number=7.6.2.- contig_18 Pyrodigal gene 20210 20995 . - . ID=GCA008085315_00995_gene;locus_tag=GCA008085315_00995 contig_18 Pyrodigal CDS 20210 20995 . - 0 ID=GCA008085315_00995;Name=Bcr/CflA family efflux transporter;locus_tag=GCA008085315_00995;product=Bcr/CflA family efflux transporter;Parent=GCA008085315_00995_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A4NXK2 contig_18 Pyrodigal gene 20992 21339 . - . ID=GCA008085315_00996_gene;locus_tag=GCA008085315_00996 contig_18 Pyrodigal CDS 20992 21339 . - 0 ID=GCA008085315_00996;Name=hypothetical protein;locus_tag=GCA008085315_00996;product=hypothetical protein;Parent=GCA008085315_00996_gene;inference=ab initio prediction:Pyrodigal:3.5 contig_18 Pyrodigal gene 21407 22108 . - . ID=GCA008085315_00997_gene;locus_tag=GCA008085315_00997;gene=rsuA contig_18 Pyrodigal CDS 21407 22108 . - 0 ID=GCA008085315_00997;Name=16S rRNA pseudouridine(516) synthase RsuA;locus_tag=GCA008085315_00997;product=16S rRNA pseudouridine(516) synthase RsuA;gene=rsuA;Parent=GCA008085315_00997_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1187,COG:J,RefSeq:WP_005547425.1,SO:0001217,UniParc:UPI0001B9F412,UniRef:UniRef100_UPI0001B9F412,UniRef:UniRef50_P45124,UniRef:UniRef90_A0A142FYX4;ec_number=5.4.99.19 contig_18 Pyrodigal gene 22325 24589 . + . ID=GCA008085315_00998_gene;locus_tag=GCA008085315_00998;gene=sfcA contig_18 Pyrodigal CDS 22325 24589 . + 0 ID=GCA008085315_00998;Name=NADP-dependent malate dehydrogenase (Oxaloacetate-decarboxylating);locus_tag=GCA008085315_00998;product=NADP-dependent malate dehydrogenase (Oxaloacetate-decarboxylating);gene=sfcA;Parent=GCA008085315_00998_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0281,RefSeq:WP_148333962.1,SO:0001217,UniParc:UPI0011D63531,UniRef:UniRef100_UPI0011D63531,UniRef:UniRef50_P76558,UniRef:UniRef90_E6KW42 contig_18 Pyrodigal gene 24734 25378 . + . ID=GCA008085315_00999_gene;locus_tag=GCA008085315_00999;gene=sodA contig_18 Pyrodigal CDS 24734 25378 . + 0 ID=GCA008085315_00999;Name=superoxide dismutase [Mn];locus_tag=GCA008085315_00999;product=superoxide dismutase [Mn];Dbxref=GO:0004784,GO:0006801;gene=sodA;Parent=GCA008085315_00999_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0605,COG:P,KEGG:K04564,RefSeq:WP_148333963.1,SO:0001217,UniParc:UPI0011DB578C,UniRef:UniRef100_UPI0011DB578C,UniRef:UniRef50_P43725,UniRef:UniRef90_E6KW41;ec_number=1.15.1.1 contig_18 Pyrodigal gene 25789 26580 . + . ID=GCA008085315_01000_gene;locus_tag=GCA008085315_01000 contig_18 Pyrodigal CDS 25789 26580 . + 0 ID=GCA008085315_01000;Name=factor H-binding protein;locus_tag=GCA008085315_01000;product=factor H-binding protein;Parent=GCA008085315_01000_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005547433.1,SO:0001217,UniParc:UPI0001B9F416,UniRef:UniRef100_UPI0001B9F416,UniRef:UniRef50_A0A9X5S9N1,UniRef:UniRef90_A0A5D0EHJ7 contig_18 Pyrodigal gene 26782 27609 . - . ID=GCA008085315_01001_gene;locus_tag=GCA008085315_01001;gene=ypfJ contig_18 Pyrodigal CDS 26782 27609 . - 0 ID=GCA008085315_01001;Name=Zinc protease;locus_tag=GCA008085315_01001;product=Zinc protease;gene=ypfJ;Parent=GCA008085315_01001_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2321,COG:R,KEGG:K07054,RefSeq:WP_148333964.1,SO:0001217,UniParc:UPI0011DBFB5C,UniRef:UniRef100_UPI0011DBFB5C,UniRef:UniRef50_A3MZY5,UniRef:UniRef90_G4AA79 contig_18 Pyrodigal gene 27749 28192 . + . ID=GCA008085315_01002_gene;locus_tag=GCA008085315_01002;gene=lysM contig_18 Pyrodigal CDS 27749 28192 . + 0 ID=GCA008085315_01002;Name=peptidoglycan-binding protein LysM;locus_tag=GCA008085315_01002;product=peptidoglycan-binding protein LysM;gene=lysM;Parent=GCA008085315_01002_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005547437.1,SO:0001217,UniParc:UPI0001B9F418,UniRef:UniRef100_UPI0001B9F418,UniRef:UniRef50_A0A972MP13,UniRef:UniRef90_A0A3S4TQ60 contig_18 Pyrodigal gene 28282 28878 . - . ID=GCA008085315_01003_gene;locus_tag=GCA008085315_01003;gene=plsY contig_18 Pyrodigal CDS 28282 28878 . - 0 ID=GCA008085315_01003;Name=glycerol-3-phosphate 1-O-acyltransferase PlsY;locus_tag=GCA008085315_01003;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;Dbxref=GO:0005886,GO:0006654,GO:0008374;gene=plsY;Parent=GCA008085315_01003_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0344,COG:I,KEGG:K08591,RefSeq:WP_005543723.1,SO:0001217,UniParc:UPI0001B9F419,UniRef:UniRef100_A0A5D0KUM4,UniRef:UniRef50_P67161,UniRef:UniRef90_A0A336N7C5;ec_number=2.3.1.275 contig_18 Pyrodigal gene 28975 29328 . + . ID=GCA008085315_01004_gene;locus_tag=GCA008085315_01004;gene=folB contig_18 Pyrodigal CDS 28975 29328 . + 0 ID=GCA008085315_01004;Name=dihydroneopterin aldolase;locus_tag=GCA008085315_01004;product=dihydroneopterin aldolase;Dbxref=GO:0004150,GO:0006760;gene=folB;Parent=GCA008085315_01004_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1539,COG:H,RefSeq:WP_005547440.1,SO:0001217,UniParc:UPI0001B9F41A,UniRef:UniRef100_UPI0001B9F41A,UniRef:UniRef50_P46362,UniRef:UniRef90_A0A142FYY8;ec_number=4.1.2.25 contig_18 Pyrodigal gene 29349 30779 . + . ID=GCA008085315_01005_gene;locus_tag=GCA008085315_01005;gene=mltF contig_18 Pyrodigal CDS 29349 30779 . + 0 ID=GCA008085315_01005;Name=membrane-bound lytic murein transglycosylase MltF;locus_tag=GCA008085315_01005;product=membrane-bound lytic murein transglycosylase MltF;Dbxref=GO:0000270,GO:0008933,GO:0016020;gene=mltF;Parent=GCA008085315_01005_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4623,COG:MT,RefSeq:WP_148320808.1,SO:0001217,UniParc:UPI0011D62294,UniRef:UniRef100_UPI0011D62294,UniRef:UniRef50_P44587,UniRef:UniRef90_A0A142FYY7;ec_number=4.2.2.- contig_18 Pyrodigal gene 30790 30936 . + . ID=GCA008085315_01006_gene;locus_tag=GCA008085315_01006 contig_18 Pyrodigal CDS 30790 30936 . + 0 ID=GCA008085315_01006;Name=hypothetical protein;locus_tag=GCA008085315_01006;product=hypothetical protein;Parent=GCA008085315_01006_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_E6KW37,UniRef:UniRef90_G4AA74 contig_18 Pyrodigal gene 30979 31518 . - . ID=GCA008085315_01007_gene;locus_tag=GCA008085315_01007;gene=dsbB contig_18 Pyrodigal CDS 30979 31518 . - 0 ID=GCA008085315_01007;Name=disulfide bond formation protein DsbB;locus_tag=GCA008085315_01007;product=disulfide bond formation protein DsbB;Dbxref=GO:0006457,GO:0015035,GO:0016020;gene=dsbB;Parent=GCA008085315_01007_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1495,COG:O,KEGG:K03611,RefSeq:WP_005547444.1,SO:0001217,UniParc:UPI0001B9F41D,UniRef:UniRef100_UPI0001B9F41D,UniRef:UniRef50_Q0I309,UniRef:UniRef90_A0A5D0EM60;ec_number=1.8.5.9 contig_18 Pyrodigal gene 31542 33086 . - . ID=GCA008085315_01008_gene;locus_tag=GCA008085315_01008;gene=nhaB contig_18 Pyrodigal CDS 31542 33086 . - 0 ID=GCA008085315_01008;Name=Na(+)/H(+) antiporter NhaB;locus_tag=GCA008085315_01008;product=Na(+)/H(+) antiporter NhaB;Dbxref=GO:0006814,GO:0015385,GO:0016020;gene=nhaB;Parent=GCA008085315_01008_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3067,COG:CP,RefSeq:WP_005543712.1,SO:0001217,UniParc:UPI0001CA7366,UniRef:UniRef100_A0A5D0EIN5,UniRef:UniRef50_Q56577,UniRef:UniRef90_A0A336N6X4 contig_18 Pyrodigal gene 33281 34012 . + . ID=GCA008085315_01009_gene;locus_tag=GCA008085315_01009;gene=fadR contig_18 Pyrodigal CDS 33281 34012 . + 0 ID=GCA008085315_01009;Name=fatty acid metabolism transcriptional regulator FadR;locus_tag=GCA008085315_01009;product=fatty acid metabolism transcriptional regulator FadR;Dbxref=GO:0000062,GO:0003677,GO:0003700,GO:0006355,GO:0019217;gene=fadR;Parent=GCA008085315_01009_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2186,COG:K,KEGG:K03603,RefSeq:WP_005568029.1,SO:0001217,UniParc:UPI0001B9F41F,UniRef:UniRef100_UPI0001B9F41F,UniRef:UniRef50_Q8ZEL9,UniRef:UniRef90_A0A5D0EII1 contig_18 Pyrodigal gene 34133 35347 . - . ID=GCA008085315_01010_gene;locus_tag=GCA008085315_01010;gene=aspB contig_18 Pyrodigal CDS 34133 35347 . - 0 ID=GCA008085315_01010;Name=alanine transaminase;locus_tag=GCA008085315_01010;product=alanine transaminase;gene=aspB;Parent=GCA008085315_01010_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0436,COG:E,RefSeq:WP_005547449.1,SO:0001217,UniParc:UPI0001B9F420,UniRef:UniRef100_UPI0001B9F420,UniRef:UniRef50_P71348,UniRef:UniRef90_E6KW33 contig_18 Pyrodigal gene 35464 36768 . + . ID=GCA008085315_01011_gene;locus_tag=GCA008085315_01011;gene=menF contig_18 Pyrodigal CDS 35464 36768 . + 0 ID=GCA008085315_01011;Name=Isochorismate synthase MenF;locus_tag=GCA008085315_01011;product=Isochorismate synthase MenF;gene=menF;Parent=GCA008085315_01011_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1169,COG:HQ,RefSeq:WP_005547450.1,SO:0001217,UniParc:UPI0001B9F421,UniRef:UniRef100_UPI0001B9F421,UniRef:UniRef50_Q9CPI5,UniRef:UniRef90_A0A5D0EHI8 contig_18 Pyrodigal gene 36759 38465 . + . ID=GCA008085315_01012_gene;locus_tag=GCA008085315_01012;gene=menD contig_18 Pyrodigal CDS 36759 38465 . + 0 ID=GCA008085315_01012;Name=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;locus_tag=GCA008085315_01012;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;Dbxref=GO:0009234,GO:0030976,GO:0070204;gene=menD;Parent=GCA008085315_01012_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1165,COG:H,KEGG:K02551,RefSeq:WP_005568025.1,SO:0001217,UniParc:UPI00022AC83D,UniRef:UniRef100_UPI00022AC83D,UniRef:UniRef50_P44612,UniRef:UniRef90_E6KW31;ec_number=2.2.1.9 contig_18 Pyrodigal gene 38518 39267 . + . ID=GCA008085315_01013_gene;locus_tag=GCA008085315_01013;gene=menH contig_18 Pyrodigal CDS 38518 39267 . + 0 ID=GCA008085315_01013;Name=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;locus_tag=GCA008085315_01013;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;Dbxref=GO:0009234,GO:0070205;gene=menH;Parent=GCA008085315_01013_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0596,COG:HR,RefSeq:WP_005547454.1,SO:0001217,UniParc:UPI00022AC83C,UniRef:UniRef100_UPI00022AC83C,UniRef:UniRef50_P44611,UniRef:UniRef90_G4AA67;ec_number=4.2.99.20 contig_18 Infernal regulatory_region 39299 39419 2.1e-14 + . ID=FFLMJBKAJI_100;Name=Ribosomal S15 leader;product=Ribosomal S15 leader;Dbxref=RFAM:RF00114;inference=profile:Rfam:RF00114;Note=SO:0000140;regulatory_class=attenuator contig_18 Pyrodigal gene 39363 39632 . + . ID=GCA008085315_01014_gene;locus_tag=GCA008085315_01014;gene=rpsO contig_18 Pyrodigal CDS 39363 39632 . + 0 ID=GCA008085315_01014;Name=30S ribosomal protein S15;locus_tag=GCA008085315_01014;product=30S ribosomal protein S15;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:0022627;gene=rpsO;Parent=GCA008085315_01014_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0184,COG:J,RefSeq:WP_005540508.1,SO:0001217,UniParc:UPI0001AAE0C9,UniRef:UniRef100_A0A142FYX9,UniRef:UniRef50_P41120,UniRef:UniRef90_Q9CNX1 contig_18 Pyrodigal gene 39840 40994 . + . ID=GCA008085315_01015_gene;locus_tag=GCA008085315_01015;gene=metK contig_18 Pyrodigal CDS 39840 40994 . + 0 ID=GCA008085315_01015;Name=methionine adenosyltransferase;locus_tag=GCA008085315_01015;product=methionine adenosyltransferase;Dbxref=GO:0000287,GO:0004478,GO:0005524,GO:0005737,GO:0006556,GO:0006730;gene=metK;Parent=GCA008085315_01015_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0192,COG:H,KEGG:K00789,RefSeq:WP_005547457.1,SO:0001217,UniParc:UPI0001B9F424,UniRef:UniRef100_UPI0001B9F424,UniRef:UniRef50_P0A817,UniRef:UniRef90_P57897;ec_number=2.5.1.6 contig_18 Pyrodigal gene 41063 41563 . + . ID=GCA008085315_01016_gene;locus_tag=GCA008085315_01016;gene=sprT contig_18 Pyrodigal CDS 41063 41563 . + 0 ID=GCA008085315_01016;Name=SprT family zinc-dependent metalloprotease;locus_tag=GCA008085315_01016;product=SprT family zinc-dependent metalloprotease;gene=sprT;Parent=GCA008085315_01016_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3091,COG:R,RefSeq:WP_005568024.1,SO:0001217,UniParc:UPI00022AC83B,UniRef:UniRef100_UPI00022AC83B,UniRef:UniRef50_Q7VMU2,UniRef:UniRef90_A0A142FZ02 contig_18 Pyrodigal gene 41720 42961 . + . ID=GCA008085315_01017_gene;locus_tag=GCA008085315_01017;gene=sdaC contig_18 Pyrodigal CDS 41720 42961 . + 0 ID=GCA008085315_01017;Name=Serine transporter;locus_tag=GCA008085315_01017;product=Serine transporter;gene=sdaC;Parent=GCA008085315_01017_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0814,COG:E,RefSeq:WP_148320812.1,SO:0001217,UniParc:UPI0011D97AA8,UniRef:UniRef100_UPI0011D97AA8,UniRef:UniRef50_P44615,UniRef:UniRef90_A0A336N7A6 contig_18 Pyrodigal gene 43054 44418 . + . ID=GCA008085315_01018_gene;locus_tag=GCA008085315_01018;gene=sdaA contig_18 Pyrodigal CDS 43054 44418 . + 0 ID=GCA008085315_01018;Name=L-serine ammonia-lyase;locus_tag=GCA008085315_01018;product=L-serine ammonia-lyase;Dbxref=GO:0003941,GO:0006094;gene=sdaA;Parent=GCA008085315_01018_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1760,COG:E,KEGG:K01752,RefSeq:WP_005547462.1,SO:0001217,UniParc:UPI0001B9F498,UniRef:UniRef100_UPI0001B9F498,UniRef:UniRef50_P42630,UniRef:UniRef90_A0A5D0EJK3;ec_number=4.3.1.17 contig_18 Infernal gene 44422 44518 . + . ID=GCA008085315_01019_gene;locus_tag=GCA008085315_01019;gene=AaHKsRNA22 contig_18 Infernal ncRNA 44422 44518 3e-14 + . ID=GCA008085315_01019;Name=Aggregatibacter sRNA 22;locus_tag=GCA008085315_01019;product=Aggregatibacter sRNA 22;Dbxref=RFAM:RF02902;Parent=GCA008085315_01019_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02902 contig_18 Pyrodigal gene 44599 45648 . - . ID=GCA008085315_01020_gene;locus_tag=GCA008085315_01020;gene=ansB contig_18 Pyrodigal CDS 44599 45648 . - 0 ID=GCA008085315_01020;Name=L-asparaginase 2;locus_tag=GCA008085315_01020;product=L-asparaginase 2;Dbxref=GO:0004067,GO:0006528;gene=ansB;Parent=GCA008085315_01020_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0252,COG:JE,RefSeq:WP_005568022.1,SO:0001217,UniParc:UPI00022AC573,UniRef:UniRef100_UPI00022AC573,UniRef:UniRef50_A7ZG80,UniRef:UniRef90_UPI0011DB9352;ec_number=3.5.1.1 contig_18 Pyrodigal gene 45943 47082 . + . ID=GCA008085315_01021_gene;locus_tag=GCA008085315_01021;gene=rlmN contig_18 Pyrodigal CDS 45943 47082 . + 0 ID=GCA008085315_01021;Name=bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN;locus_tag=GCA008085315_01021;product=bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN;Dbxref=GO:0000049,GO:0002935,GO:0005737,GO:0019843,GO:0030488,GO:0046872,GO:0051539,GO:0070040,GO:0070475;gene=rlmN;Parent=GCA008085315_01021_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0820,COG:J,KEGG:K06941,SO:0001217,UniRef:UniRef50_P36979,UniRef:UniRef90_A5UAC2;ec_number=2.1.1.192 contig_18 Pyrodigal gene 47104 47655 . + . ID=GCA008085315_01022_gene;locus_tag=GCA008085315_01022;gene=pilW contig_18 Pyrodigal CDS 47104 47655 . + 0 ID=GCA008085315_01022;Name=type IV pilus biogenesis/stability protein PilW;locus_tag=GCA008085315_01022;product=type IV pilus biogenesis/stability protein PilW;Dbxref=GO:0005515;gene=pilW;Parent=GCA008085315_01022_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3063,COG:NW,RefSeq:WP_005547469.1,SO:0001217,UniParc:UPI0001B9F49B,UniRef:UniRef100_UPI0001B9F49B,UniRef:UniRef50_P43988,UniRef:UniRef90_G4AA58 contig_18 Pyrodigal gene 47799 48854 . + . ID=GCA008085315_01023_gene;locus_tag=GCA008085315_01023;gene=rodZ contig_18 Pyrodigal CDS 47799 48854 . + 0 ID=GCA008085315_01023;Name=Cytoskeleton protein RodZ-like C-terminal domain-containing protein;locus_tag=GCA008085315_01023;product=Cytoskeleton protein RodZ-like C-terminal domain-containing protein;gene=rodZ;Parent=GCA008085315_01023_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1426,COG:D,RefSeq:WP_148320815.1,SO:0001217,UniParc:UPI0011D4A773,UniRef:UniRef100_UPI0011D4A773,UniRef:UniRef50_Q65R85,UniRef:UniRef90_G4AA57 contig_18 Pyrodigal gene 48866 49969 . + . ID=GCA008085315_01024_gene;locus_tag=GCA008085315_01024;gene=ispG contig_18 Pyrodigal CDS 48866 49969 . + 0 ID=GCA008085315_01024;Name=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;locus_tag=GCA008085315_01024;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;Dbxref=GO:0005506,GO:0008152,GO:0016114,GO:0019288,GO:0046429,GO:0051539,GO:0141197;gene=ispG;Parent=GCA008085315_01024_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0821,COG:I,KEGG:K03526,RefSeq:WP_005547472.1,SO:0001217,UniParc:UPI0001B9F49D,UniRef:UniRef100_UPI0001B9F49D,UniRef:UniRef50_P62620,UniRef:UniRef90_P44667;ec_number=1.17.7.3 contig_18 Pyrodigal gene 49991 51268 . + . ID=GCA008085315_01025_gene;locus_tag=GCA008085315_01025;gene=hisS contig_18 Pyrodigal CDS 49991 51268 . + 0 ID=GCA008085315_01025;Name=histidine--tRNA ligase;locus_tag=GCA008085315_01025;product=histidine--tRNA ligase;Dbxref=GO:0004821,GO:0005524,GO:0005737,GO:0006427;gene=hisS;Parent=GCA008085315_01025_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0124,COG:J,KEGG:K01892,RefSeq:WP_005547474.1,SO:0001217,UniParc:UPI0001B9F49E,UniRef:UniRef100_UPI0001B9F49E,UniRef:UniRef50_Q6D277,UniRef:UniRef90_E6KZL9;ec_number=6.1.1.21 contig_18 Pyrodigal gene 51279 51893 . + . ID=GCA008085315_01026_gene;locus_tag=GCA008085315_01026;gene=1057 contig_18 Pyrodigal CDS 51279 51893 . + 0 ID=GCA008085315_01026;Name=Ancillary SecYEG translocon subunit;locus_tag=GCA008085315_01026;product=Ancillary SecYEG translocon subunit;Dbxref=GO:0005886,GO:0044877;gene=1057;Parent=GCA008085315_01026_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2976,COG:T,RefSeq:WP_005547476.1,SO:0001217,UniParc:UPI0001B9F49F,UniRef:UniRef100_UPI0001B9F49F,UniRef:UniRef50_O52728,UniRef:UniRef90_O52728 contig_18 Pyrodigal gene 51946 52398 . + . ID=GCA008085315_01027_gene;locus_tag=GCA008085315_01027;gene=sTE14 contig_18 Pyrodigal CDS 51946 52398 . + 0 ID=GCA008085315_01027;Name=Isoprenylcysteine carboxyl methyltransferase;locus_tag=GCA008085315_01027;product=Isoprenylcysteine carboxyl methyltransferase;gene=sTE14;Parent=GCA008085315_01027_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2020,COG:O,RefSeq:WP_005539334.1,SO:0001217,UniParc:UPI0001B9F4A0,UniRef:UniRef100_A0A142FZ12,UniRef:UniRef50_A0A336N777,UniRef:UniRef90_A0A142FZ12 contig_18 Pyrodigal gene 52404 53108 . - . ID=GCA008085315_01028_gene;locus_tag=GCA008085315_01028;gene=hda contig_18 Pyrodigal CDS 52404 53108 . - 0 ID=GCA008085315_01028;Name=DnaA regulatory inactivator Hda;locus_tag=GCA008085315_01028;product=DnaA regulatory inactivator Hda;Dbxref=GO:0016818,GO:0032297;gene=hda;Parent=GCA008085315_01028_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0593,COG:L,KEGG:K10763,RefSeq:WP_005539331.1,SO:0001217,UniParc:UPI0001B9F4A1,UniRef:UniRef100_A0A142FZ13,UniRef:UniRef50_O86235,UniRef:UniRef90_A0A142FZ13 contig_18 Pyrodigal gene 53228 54481 . - . ID=GCA008085315_01029_gene;locus_tag=GCA008085315_01029;gene=uraA contig_18 Pyrodigal CDS 53228 54481 . - 0 ID=GCA008085315_01029;Name=NCS family uracil:cation symporter;locus_tag=GCA008085315_01029;product=NCS family uracil:cation symporter;gene=uraA;Parent=GCA008085315_01029_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2233,COG:F,KEGG:K02824,RefSeq:WP_053329782.1,SO:0001217,UniParc:UPI0006A74AF4,UniRef:UniRef100_UPI0006A74AF4,UniRef:UniRef50_Q9CPL9,UniRef:UniRef90_E6KZL5 contig_18 Pyrodigal gene 54605 55231 . - . ID=GCA008085315_01030_gene;locus_tag=GCA008085315_01030;gene=upp contig_18 Pyrodigal CDS 54605 55231 . - 0 ID=GCA008085315_01030;Name=uracil phosphoribosyltransferase;locus_tag=GCA008085315_01030;product=uracil phosphoribosyltransferase;Dbxref=GO:0000287,GO:0004845,GO:0005525,GO:0006223,GO:0009116,GO:0044206;gene=upp;Parent=GCA008085315_01030_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0035,COG:F,RefSeq:WP_005539327.1,SO:0001217,UniParc:UPI0001B9F4A4,UniRef:UniRef100_A0A142FZ15,UniRef:UniRef50_Q8ZCX9,UniRef:UniRef90_A6VQ76;ec_number=2.4.2.9 contig_18 Pyrodigal gene 55366 57213 . - . ID=GCA008085315_01031_gene;locus_tag=GCA008085315_01031;gene=ppiD contig_18 Pyrodigal CDS 55366 57213 . - 0 ID=GCA008085315_01031;Name=peptidylprolyl isomerase;locus_tag=GCA008085315_01031;product=peptidylprolyl isomerase;Dbxref=GO:0003755;gene=ppiD;Parent=GCA008085315_01031_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0760,COG:O,RefSeq:WP_005547484.1,SO:0001217,UniParc:UPI0001B9F4A5,UniRef:UniRef100_UPI0001B9F4A5,UniRef:UniRef50_A0A1A7NZX7,UniRef:UniRef90_A0A5D0EKM8;ec_number=5.2.1.8 contig_18 Pyrodigal gene 57346 59619 . - . ID=GCA008085315_01032_gene;locus_tag=GCA008085315_01032;gene=gshB contig_18 Pyrodigal CDS 57346 59619 . - 0 ID=GCA008085315_01032;Name=bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB;locus_tag=GCA008085315_01032;product=bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB;Dbxref=GO:0004357,GO:0005524,GO:0006750,GO:0046872;gene=gshB;Parent=GCA008085315_01032_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2918,COG:H,RefSeq:WP_012821123.1,SO:0001217,UniParc:UPI0001B9F4A6,UniRef:UniRef100_UPI0001B9F4A6,UniRef:UniRef50_Q9CM00,UniRef:UniRef90_A0A5D0EJC4;ec_number=6.3.2.3 contig_18 Pyrodigal gene 59851 61452 . + . ID=GCA008085315_01033_gene;locus_tag=GCA008085315_01033;gene=opgE contig_18 Pyrodigal CDS 59851 61452 . + 0 ID=GCA008085315_01033;Name=Sulfatase N-terminal domain-containing protein;locus_tag=GCA008085315_01033;product=Sulfatase N-terminal domain-containing protein;gene=opgE;Parent=GCA008085315_01033_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2194,COG:M,RefSeq:WP_005588272.1,SO:0001217,UniParc:UPI0001B9F4A8,UniRef:UniRef100_UPI0001B9F4A8,UniRef:UniRef50_E6KZ86,UniRef:UniRef90_A0AAC8XZ40 contig_18 Pyrodigal gene 61694 62275 . + . ID=GCA008085315_01034_gene;locus_tag=GCA008085315_01034;gene=clpP contig_18 Pyrodigal CDS 61694 62275 . + 0 ID=GCA008085315_01034;Name=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;locus_tag=GCA008085315_01034;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;Dbxref=GO:0004176,GO:0004252,GO:0006508,GO:0009368;gene=clpP;Parent=GCA008085315_01034_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0740,COG:O,KEGG:K01358,RefSeq:WP_005542551.1,SO:0001217,UniParc:UPI00022AC432,UniRef:UniRef100_A0A5D0KZ27,UniRef:UniRef50_Q9K709,UniRef:UniRef90_E6KZ87;ec_number=3.4.21.92 contig_18 Pyrodigal gene 62285 63526 . + . ID=GCA008085315_01035_gene;locus_tag=GCA008085315_01035;gene=clpX contig_18 Pyrodigal CDS 62285 63526 . + 0 ID=GCA008085315_01035;Name=ATP-dependent protease ATP-binding subunit ClpX;locus_tag=GCA008085315_01035;product=ATP-dependent protease ATP-binding subunit ClpX;Dbxref=GO:0005524,GO:0009368,GO:0051082,GO:0140662;gene=clpX;Parent=GCA008085315_01035_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1219,COG:O,RefSeq:WP_005547491.1,SO:0001217,UniParc:UPI0001B9F4AA,UniRef:UniRef100_UPI0001B9F4AA,UniRef:UniRef50_Q8ZC66,UniRef:UniRef90_E6KZ88;ec_number=3.4.21.92 contig_18 Pyrodigal gene 63589 63912 . - . ID=GCA008085315_01036_gene;locus_tag=GCA008085315_01036;gene=ata contig_18 Pyrodigal CDS 63589 63912 . - 0 ID=GCA008085315_01036;Name=XRE family transcriptional regulator;locus_tag=GCA008085315_01036;product=XRE family transcriptional regulator;gene=ata;Parent=GCA008085315_01036_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5606,COG:V,RefSeq:WP_005547493.1,SO:0001217,UniParc:UPI0001B9F4AB,UniRef:UniRef100_UPI0001B9F4AB,UniRef:UniRef50_C5RYM9,UniRef:UniRef90_A0A142G102 contig_18 Pyrodigal gene 63905 64255 . - . ID=GCA008085315_01037_gene;locus_tag=GCA008085315_01037;gene=tad contig_18 Pyrodigal CDS 63905 64255 . - 0 ID=GCA008085315_01037;Name=Type II toxin-antitoxin system RelE/ParE family toxin;locus_tag=GCA008085315_01037;product=Type II toxin-antitoxin system RelE/ParE family toxin;gene=tad;Parent=GCA008085315_01037_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4679,COG:VX,RefSeq:WP_005585570.1,SO:0001217,UniParc:UPI0002ABA319,UniRef:UniRef100_UPI0002ABA319,UniRef:UniRef50_G4AA41,UniRef:UniRef90_G4AA41 contig_18 Pyrodigal gene 64372 65217 . - . ID=GCA008085315_01038_gene;locus_tag=GCA008085315_01038;gene=yoaT contig_18 Pyrodigal CDS 64372 65217 . - 0 ID=GCA008085315_01038;Name=DUF817 domain-containing protein;locus_tag=GCA008085315_01038;product=DUF817 domain-containing protein;gene=yoaT;Parent=GCA008085315_01038_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3739,COG:S,RefSeq:WP_005547497.1,SO:0001217,UniParc:UPI0001B9F4AD,UniRef:UniRef100_UPI0001B9F4AD,UniRef:UniRef50_Q7CY85,UniRef:UniRef90_A0AAC8XZC0 contig_18 Pyrodigal gene 65290 67449 . - . ID=GCA008085315_01039_gene;locus_tag=GCA008085315_01039;gene=zntA contig_18 Pyrodigal CDS 65290 67449 . - 0 ID=GCA008085315_01039;Name=Copper-exporting P-type ATPase A;locus_tag=GCA008085315_01039;product=Copper-exporting P-type ATPase A;gene=zntA;Parent=GCA008085315_01039_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2217,COG:P,KEGG:K17686,RefSeq:WP_148320823.1,SO:0001217,UniParc:UPI0011D37A07,UniRef:UniRef100_UPI0011D37A07,UniRef:UniRef50_P77868,UniRef:UniRef90_A0A336N638;ec_number=7.2.2.8 contig_18 Pyrodigal gene 67536 67748 . - . ID=GCA008085315_01040_gene;locus_tag=GCA008085315_01040;gene=copZ contig_18 Pyrodigal CDS 67536 67748 . - 0 ID=GCA008085315_01040;Name=Heavy-metal-associated domain-containing protein;locus_tag=GCA008085315_01040;product=Heavy-metal-associated domain-containing protein;gene=copZ;Parent=GCA008085315_01040_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2608,COG:P,RefSeq:WP_005547502.1,SO:0001217,UniParc:UPI0001B9F4AF,UniRef:UniRef100_UPI0001B9F4AF,UniRef:UniRef50_A0A0J0YR22,UniRef:UniRef90_A0A142G106 contig_18 Pyrodigal gene 67843 69441 . + . ID=GCA008085315_01041_gene;locus_tag=GCA008085315_01041 contig_18 Pyrodigal CDS 67843 69441 . + 0 ID=GCA008085315_01041;Name=Type I restriction enzyme endonuclease subunit;locus_tag=GCA008085315_01041;product=Type I restriction enzyme endonuclease subunit;Parent=GCA008085315_01041_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_G4AA33 contig_18 Pyrodigal gene 69669 69779 . - . ID=GCA008085315_01042_gene;locus_tag=GCA008085315_01042 contig_18 Pyrodigal CDS 69669 69779 . - 0 ID=GCA008085315_01042;Name=hypothetical protein;locus_tag=GCA008085315_01042;product=hypothetical protein;Parent=GCA008085315_01042_gene;inference=ab initio prediction:Pyrodigal:3.5 contig_18 Pyrodigal gene 69769 70605 . - . ID=GCA008085315_01043_gene;locus_tag=GCA008085315_01043;gene=tsaA contig_18 Pyrodigal CDS 69769 70605 . - 0 ID=GCA008085315_01043;Name=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;locus_tag=GCA008085315_01043;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;Dbxref=GO:0005737,GO:0006400,GO:0008757;gene=tsaA;Parent=GCA008085315_01043_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1720,COG:J,KEGG:K22900,RefSeq:WP_005572332.1,SO:0001217,UniParc:UPI0001B9F4B3,UniRef:UniRef100_UPI0001B9F4B3,UniRef:UniRef50_P44740,UniRef:UniRef90_A0A5D0EHV2;ec_number=2.1.1.- contig_18 Pyrodigal gene 70754 71638 . + . ID=GCA008085315_01044_gene;locus_tag=GCA008085315_01044;gene=menA contig_18 Pyrodigal CDS 70754 71638 . + 0 ID=GCA008085315_01044;Name=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;locus_tag=GCA008085315_01044;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;Dbxref=GO:0009234,GO:0016020,GO:0046428;gene=menA;Parent=GCA008085315_01044_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1575,COG:H,SO:0001217,UniRef:UniRef50_P32166,UniRef:UniRef90_E6KZ93;ec_number=2.5.1.74 contig_18 Pyrodigal gene 71689 72189 . + . ID=GCA008085315_01045_gene;locus_tag=GCA008085315_01045;gene=rraA contig_18 Pyrodigal CDS 71689 72189 . + 0 ID=GCA008085315_01045;Name=ribonuclease E activity regulator RraA;locus_tag=GCA008085315_01045;product=ribonuclease E activity regulator RraA;Dbxref=GO:0008428,GO:0051252;gene=rraA;Parent=GCA008085315_01045_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02553,RefSeq:WP_005540485.1,SO:0001217,UniParc:UPI0001B9F4B5,UniRef:UniRef100_A0A5D0EIA5,UniRef:UniRef50_Q65RG4,UniRef:UniRef90_A0A5D0EIA5 contig_18 Pyrodigal gene 72379 73770 . + . ID=GCA008085315_01046_gene;locus_tag=GCA008085315_01046;gene=citT contig_18 Pyrodigal CDS 72379 73770 . + 0 ID=GCA008085315_01046;Name=DASS family divalent anion:sodium (Na+) symporter;locus_tag=GCA008085315_01046;product=DASS family divalent anion:sodium (Na+) symporter;gene=citT;Parent=GCA008085315_01046_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0471,COG:G,RefSeq:WP_148320830.1,SO:0001217,UniParc:UPI0011D308AE,UniRef:UniRef100_UPI0011D308AE,UniRef:UniRef50_E6KZ95,UniRef:UniRef90_E6KZ95 contig_18 Pyrodigal gene 73828 74361 . - . ID=GCA008085315_01047_gene;locus_tag=GCA008085315_01047;gene=yjgA contig_18 Pyrodigal CDS 73828 74361 . - 0 ID=GCA008085315_01047;Name=ribosome biogenesis factor YjgA;locus_tag=GCA008085315_01047;product=ribosome biogenesis factor YjgA;Dbxref=GO:0042254;gene=yjgA;Parent=GCA008085315_01047_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K09889,RefSeq:WP_005547516.1,SO:0001217,UniParc:UPI0001B9F4B8,UniRef:UniRef100_UPI0001B9F4B8,UniRef:UniRef50_P45076,UniRef:UniRef90_A0A5D0EJB4 contig_18 Pyrodigal gene 74482 75843 . + . ID=GCA008085315_01048_gene;locus_tag=GCA008085315_01048;gene=pmbA contig_18 Pyrodigal CDS 74482 75843 . + 0 ID=GCA008085315_01048;Name=metalloprotease PmbA;locus_tag=GCA008085315_01048;product=metalloprotease PmbA;Dbxref=GO:0006508,GO:0008237;gene=pmbA;Parent=GCA008085315_01048_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0312,COG:OV,RefSeq:WP_005547518.1,SO:0001217,UniParc:UPI0001B9F4B9,UniRef:UniRef100_UPI0001B9F4B9,UniRef:UniRef50_P0AFK0,UniRef:UniRef90_E6KZ97;ec_number=3.4.24.- contig_18 Infernal gene 75907 76038 . + . ID=GCA008085315_01049_gene;locus_tag=GCA008085315_01049;gene=hrrF contig_18 Infernal ncRNA 75907 76038 2.4e-16 + . ID=GCA008085315_01049;Name=Haemophilus regulatory RNA responsive to iron;locus_tag=GCA008085315_01049;gene=hrrF;product=Haemophilus regulatory RNA responsive to iron;Dbxref=RFAM:RF02728;Parent=GCA008085315_01049_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02728 contig_18 Pyrodigal gene 76082 76621 . + . ID=GCA008085315_01050_gene;locus_tag=GCA008085315_01050;gene=hpt contig_18 Pyrodigal CDS 76082 76621 . + 0 ID=GCA008085315_01050;Name=hypoxanthine phosphoribosyltransferase;locus_tag=GCA008085315_01050;product=hypoxanthine phosphoribosyltransferase;Dbxref=GO:0006166;gene=hpt;Parent=GCA008085315_01050_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0634,COG:F,KEGG:K00760,RefSeq:WP_148333965.1,SO:0001217,UniParc:UPI0011DA4152,UniRef:UniRef100_UPI0011DA4152,UniRef:UniRef50_P45078,UniRef:UniRef90_A0A5D0EKF6;ec_number=2.4.2.8 contig_18 Pyrodigal gene 76691 77830 . - . ID=GCA008085315_01051_gene;locus_tag=GCA008085315_01051;gene=glxK contig_18 Pyrodigal CDS 76691 77830 . - 0 ID=GCA008085315_01051;Name=Glycerate kinase;locus_tag=GCA008085315_01051;product=Glycerate kinase;gene=glxK;Parent=GCA008085315_01051_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1929,COG:G,KEGG:K00865,RefSeq:WP_005547522.1,SO:0001217,UniParc:UPI0001B9F4BB,UniRef:UniRef100_UPI0001B9F4BB,UniRef:UniRef50_Q9XBL1,UniRef:UniRef90_A0A5D0EM65;ec_number=2.7.1.165 contig_18 Pyrodigal gene 77827 79101 . - . ID=GCA008085315_01052_gene;locus_tag=GCA008085315_01052;gene=gntT contig_18 Pyrodigal CDS 77827 79101 . - 0 ID=GCA008085315_01052;Name=Gnt-III system;locus_tag=GCA008085315_01052;product=Gnt-III system;gene=gntT;Parent=GCA008085315_01052_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2610,COG:G,RefSeq:WP_148320832.1,SO:0001217,UniParc:UPI0011DA0EB8,UniRef:UniRef100_UPI0011DA0EB8,UniRef:UniRef50_Q57493,UniRef:UniRef90_A0A336N574 contig_18 Pyrodigal gene 79233 80336 . - . ID=GCA008085315_01053_gene;locus_tag=GCA008085315_01053;gene=cdaR contig_18 Pyrodigal CDS 79233 80336 . - 0 ID=GCA008085315_01053;Name=XRE family transcriptional regulator;locus_tag=GCA008085315_01053;product=XRE family transcriptional regulator;gene=cdaR;Parent=GCA008085315_01053_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3835,COG:KT,KEGG:K02647,RefSeq:WP_005547526.1,SO:0001217,UniParc:UPI0001B9F52F,UniRef:UniRef100_UPI0001B9F52F,UniRef:UniRef50_A3MYL2,UniRef:UniRef90_A0A5D0EIM8 contig_18 Pyrodigal gene 80557 81252 . + . ID=GCA008085315_01054_gene;locus_tag=GCA008085315_01054 contig_18 Pyrodigal CDS 80557 81252 . + 0 ID=GCA008085315_01054;Name=UDP-glucose 6-dehydrogenase;locus_tag=GCA008085315_01054;product=UDP-glucose 6-dehydrogenase;Parent=GCA008085315_01054_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148320834.1,SO:0001217,UniParc:UPI0011D557E0,UniRef:UniRef100_UPI0011D557E0,UniRef:UniRef50_A0A379PNW4,UniRef:UniRef90_A0A5D0EHN9 contig_18 Pyrodigal gene 81336 83138 . - . ID=GCA008085315_01055_gene;locus_tag=GCA008085315_01055;gene=srmB contig_18 Pyrodigal CDS 81336 83138 . - 0 ID=GCA008085315_01055;Name=ATP-dependent RNA helicase DeaD;locus_tag=GCA008085315_01055;product=ATP-dependent RNA helicase DeaD;gene=srmB;Parent=GCA008085315_01055_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0513,COG:L,RefSeq:WP_026161177.1,SO:0001217,UniParc:UPI000475EC7D,UniRef:UniRef100_UPI000475EC7D,UniRef:UniRef50_P0A9P6,UniRef:UniRef90_A0A5D0EI98 contig_18 Pyrodigal gene 83250 84152 . - . ID=GCA008085315_01056_gene;locus_tag=GCA008085315_01056;gene=nlpI contig_18 Pyrodigal CDS 83250 84152 . - 0 ID=GCA008085315_01056;Name=lipoprotein NlpI;locus_tag=GCA008085315_01056;product=lipoprotein NlpI;Dbxref=GO:0005515;gene=nlpI;Parent=GCA008085315_01056_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4785,COG:M,RefSeq:WP_005547532.1,SO:0001217,UniParc:UPI00022AC321,UniRef:UniRef100_UPI00022AC321,UniRef:UniRef50_P44585,UniRef:UniRef90_A0A142G128 contig_18 Pyrodigal gene 84237 86366 . - . ID=GCA008085315_01057_gene;locus_tag=GCA008085315_01057;gene=pnp contig_18 Pyrodigal CDS 84237 86366 . - 0 ID=GCA008085315_01057;Name=polyribonucleotide nucleotidyltransferase;locus_tag=GCA008085315_01057;product=polyribonucleotide nucleotidyltransferase;Dbxref=GO:0000175,GO:0000287,GO:0003723,GO:0004654,GO:0005829,GO:0006396,GO:0006402;gene=pnp;Parent=GCA008085315_01057_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1185,COG:J,KEGG:K00962,RefSeq:WP_032997542.1,SO:0001217,UniParc:UPI000517C982,UniRef:UniRef100_UPI000517C982,UniRef:UniRef50_Q0I2T0,UniRef:UniRef90_Q0I2T0;ec_number=2.7.7.8 contig_18 Pyrodigal gene 86660 87130 . + . ID=GCA008085315_01058_gene;locus_tag=GCA008085315_01058;gene=nanQ contig_18 Pyrodigal CDS 86660 87130 . + 0 ID=GCA008085315_01058;Name=N-acetylneuraminate anomerase;locus_tag=GCA008085315_01058;product=N-acetylneuraminate anomerase;Dbxref=GO:0006974;gene=nanQ;Parent=GCA008085315_01058_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2731,COG:G,KEGG:K19334,RefSeq:WP_005547536.1,SO:0001217,UniParc:UPI0001B9F534,UniRef:UniRef100_UPI0001B9F534,UniRef:UniRef50_P44583,UniRef:UniRef90_A0A5D0EKP3 contig_18 Pyrodigal gene 87604 88257 . - . ID=GCA008085315_01059_gene;locus_tag=GCA008085315_01059;gene=ampD contig_18 Pyrodigal CDS 87604 88257 . - 0 ID=GCA008085315_01059;Name=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;locus_tag=GCA008085315_01059;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;Dbxref=GO:0008745,GO:0009253;gene=ampD;Parent=GCA008085315_01059_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3023,COG:M,SO:0001217,UniRef:UniRef50_P44624,UniRef:UniRef90_A0A142G126;ec_number=3.5.1.28 contig_18 Pyrodigal gene 88280 88732 . + . ID=GCA008085315_01060_gene;locus_tag=GCA008085315_01060;gene=pilA contig_18 Pyrodigal CDS 88280 88732 . + 0 ID=GCA008085315_01060;Name=PilA;locus_tag=GCA008085315_01060;product=PilA;gene=pilA;Parent=GCA008085315_01060_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4969,COG:NW,KEGG:K02682,RefSeq:WP_005586498.1,SO:0001217,UniParc:UPI0001B9F537,UniRef:UniRef100_UPI0001B9F537,UniRef:UniRef50_P44623,UniRef:UniRef90_Q8KRY6 contig_18 Pyrodigal gene 88759 90168 . + . ID=GCA008085315_01061_gene;locus_tag=GCA008085315_01061;gene=pilB contig_18 Pyrodigal CDS 88759 90168 . + 0 ID=GCA008085315_01061;Name=PilB;locus_tag=GCA008085315_01061;product=PilB;gene=pilB;Parent=GCA008085315_01061_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_019518272.1,SO:0001217,UniParc:UPI00000B6E1E,UniRef:UniRef100_Q9JRM9,UniRef:UniRef50_P44622,UniRef:UniRef90_Q8KRY5 contig_18 Pyrodigal gene 90161 90772 . + . ID=GCA008085315_01062_gene;locus_tag=GCA008085315_01062 contig_18 Pyrodigal CDS 90161 90772 . + 0 ID=GCA008085315_01062;Name=hypothetical protein;locus_tag=GCA008085315_01062;product=hypothetical protein;Parent=GCA008085315_01062_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=PFAM:PF00482.28 contig_18 Pyrodigal gene 90826 91449 . + . ID=GCA008085315_01063_gene;locus_tag=GCA008085315_01063;gene=coaE contig_18 Pyrodigal CDS 90826 91449 . + 0 ID=GCA008085315_01063;Name=dephospho-CoA kinase;locus_tag=GCA008085315_01063;product=dephospho-CoA kinase;Dbxref=GO:0004140,GO:0005524,GO:0005737,GO:0015937;gene=coaE;Parent=GCA008085315_01063_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0237,COG:H,KEGG:K00859,RefSeq:WP_005547548.1,SO:0001217,UniParc:UPI0000127CCB,UniRef:UniRef100_Q9JRM6,UniRef:UniRef50_Q9CPF5,UniRef:UniRef90_Q9JRM6;ec_number=2.7.1.24 contig_18 Pyrodigal gene 91439 91651 . + . ID=GCA008085315_01064_gene;locus_tag=GCA008085315_01064;gene=yacG contig_18 Pyrodigal CDS 91439 91651 . + 0 ID=GCA008085315_01064;Name=DNA gyrase inhibitor YacG;locus_tag=GCA008085315_01064;product=DNA gyrase inhibitor YacG;Dbxref=GO:0006355,GO:0008270;gene=yacG;Parent=GCA008085315_01064_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3024,COG:L,RefSeq:WP_005547550.1,SO:0001217,UniParc:UPI0001B9F53B,UniRef:UniRef100_UPI0001B9F53B,UniRef:UniRef50_Q5E2R0,UniRef:UniRef90_A0A5D0EJ15 contig_18 Pyrodigal gene 91651 91923 . + . ID=GCA008085315_01065_gene;locus_tag=GCA008085315_01065;gene=yidJ contig_18 Pyrodigal CDS 91651 91923 . + 0 ID=GCA008085315_01065;Name=Acetyltransferase;locus_tag=GCA008085315_01065;product=Acetyltransferase;gene=yidJ;Parent=GCA008085315_01065_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2388,COG:R,RefSeq:WP_005547552.1,SO:0001217,UniParc:UPI0001B9F53C,UniRef:UniRef100_UPI0001B9F53C,UniRef:UniRef50_Q65VP6,UniRef:UniRef90_A0A5D0EKC1 contig_18 Infernal regulatory_region 92065 92213 1.3e-08 + . ID=FFLMJBKAJI_101;Name=Glycine riboswitch aptamer;product=Glycine riboswitch aptamer;Dbxref=RFAM:RF00504;inference=profile:Rfam:RF00504;Note=SO:0000035;regulatory_class=riboswitch contig_18 Pyrodigal gene 92320 93693 . + . ID=GCA008085315_01066_gene;locus_tag=GCA008085315_01066;gene=alsT contig_18 Pyrodigal CDS 92320 93693 . + 0 ID=GCA008085315_01066;Name=AGCS family alanine/glycine:sodium (Na+) symporter;locus_tag=GCA008085315_01066;product=AGCS family alanine/glycine:sodium (Na+) symporter;gene=alsT;Parent=GCA008085315_01066_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1115,COG:E,KEGG:K03310,RefSeq:WP_005547554.1,SO:0001217,UniParc:UPI00022AC31B,UniRef:UniRef100_UPI00022AC31B,UniRef:UniRef50_P44917,UniRef:UniRef90_E6KZB3 contig_18 Pyrodigal gene 93922 94245 . + . ID=GCA008085315_01067_gene;locus_tag=GCA008085315_01067;gene=raiA contig_18 Pyrodigal CDS 93922 94245 . + 0 ID=GCA008085315_01067;Name=ribosome-associated translation inhibitor RaiA;locus_tag=GCA008085315_01067;product=ribosome-associated translation inhibitor RaiA;gene=raiA;Parent=GCA008085315_01067_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1544,COG:J,RefSeq:WP_005540708.1,SO:0001217,UniParc:UPI0001B9F53E,UniRef:UniRef100_A0A142G0Z0,UniRef:UniRef50_P71346,UniRef:UniRef90_A0A142G0Z0 contig_18 Pyrodigal gene 94394 94948 . + . ID=GCA008085315_01068_gene;locus_tag=GCA008085315_01068 contig_18 Pyrodigal CDS 94394 94948 . + 0 ID=GCA008085315_01068;Name=DUF5358 domain-containing protein;locus_tag=GCA008085315_01068;product=DUF5358 domain-containing protein;Parent=GCA008085315_01068_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005540709.1,SO:0001217,UniParc:UPI0001CA7919,UniRef:UniRef100_A0A142G0Y9,UniRef:UniRef50_P44085,UniRef:UniRef90_A0A142G0Y9 contig_18 Pyrodigal gene 95564 95863 . - . ID=GCA008085315_01069_gene;locus_tag=GCA008085315_01069;gene=fis contig_18 Pyrodigal CDS 95564 95863 . - 0 ID=GCA008085315_01069;Name=DNA-binding transcriptional regulator Fis;locus_tag=GCA008085315_01069;product=DNA-binding transcriptional regulator Fis;Dbxref=GO:0003700,GO:0043565;gene=fis;Parent=GCA008085315_01069_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2901,COG:K,RefSeq:WP_005540710.1,SO:0001217,UniParc:UPI0001B9F540,UniRef:UniRef100_A0A142G0Y8,UniRef:UniRef50_P57902,UniRef:UniRef90_Q0I1Y8 contig_18 Pyrodigal gene 95857 96906 . - . ID=GCA008085315_01070_gene;locus_tag=GCA008085315_01070;gene=dusB contig_18 Pyrodigal CDS 95857 96906 . - 0 ID=GCA008085315_01070;Name=tRNA dihydrouridine synthase DusB;locus_tag=GCA008085315_01070;product=tRNA dihydrouridine synthase DusB;Dbxref=GO:0008033,GO:0017150,GO:0050660;gene=dusB;Parent=GCA008085315_01070_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0042,COG:J,KEGG:K05540,SO:0001217,UniRef:UniRef50_Q8EJR8,UniRef:UniRef90_A0A142G0Y7;ec_number=1.3.1.- contig_18 Pyrodigal gene 97151 98035 . - . ID=GCA008085315_01071_gene;locus_tag=GCA008085315_01071;gene=prmA contig_18 Pyrodigal CDS 97151 98035 . - 0 ID=GCA008085315_01071;Name=50S ribosomal protein L11 methyltransferase;locus_tag=GCA008085315_01071;product=50S ribosomal protein L11 methyltransferase;Dbxref=GO:0008757,GO:0036211;gene=prmA;Parent=GCA008085315_01071_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2264,COG:J,RefSeq:WP_148320836.1,SO:0001217,UniParc:UPI0011D9BD0A,UniRef:UniRef100_UPI0011D9BD0A,UniRef:UniRef50_Q8EJR7,UniRef:UniRef90_E6KW23 contig_18 Pyrodigal gene 98048 98590 . - . ID=GCA008085315_01072_gene;locus_tag=GCA008085315_01072;gene=fic contig_18 Pyrodigal CDS 98048 98590 . - 0 ID=GCA008085315_01072;Name=protein adenylyltransferase Fic;locus_tag=GCA008085315_01072;product=protein adenylyltransferase Fic;Dbxref=GO:0018117,GO:0042803,GO:0070733;gene=fic;Parent=GCA008085315_01072_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2184,COG:T,RefSeq:WP_005547567.1,SO:0001217,UniParc:UPI0001B9F543,UniRef:UniRef100_UPI0001B9F543,UniRef:UniRef50_Q7DDR9,UniRef:UniRef90_U1S7N4;ec_number=2.7.7.108 contig_18 Pyrodigal gene 98609 100045 . - . ID=GCA008085315_01073_gene;locus_tag=GCA008085315_01073;gene=panF contig_18 Pyrodigal CDS 98609 100045 . - 0 ID=GCA008085315_01073;Name=sodium/pantothenate symporter;locus_tag=GCA008085315_01073;product=sodium/pantothenate symporter;Dbxref=GO:0015081,GO:0015233,GO:0015887,GO:0016020,GO:0036376;gene=panF;Parent=GCA008085315_01073_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4145,COG:H,KEGG:K14392,RefSeq:WP_148320838.1,SO:0001217,UniParc:UPI0011D970F9,UniRef:UniRef100_UPI0011D970F9,UniRef:UniRef50_P16256,UniRef:UniRef90_E6KW22 contig_18 Pyrodigal gene 100042 100314 . - . ID=GCA008085315_01074_gene;locus_tag=GCA008085315_01074;gene=yhdT contig_18 Pyrodigal CDS 100042 100314 . - 0 ID=GCA008085315_01074;Name=DUF997 domain-containing protein;locus_tag=GCA008085315_01074;product=DUF997 domain-containing protein;gene=yhdT;Parent=GCA008085315_01074_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3924,COG:S,RefSeq:WP_005547570.1,SO:0001217,UniParc:UPI0001B9F545,UniRef:UniRef100_G4AA05,UniRef:UniRef50_A6VM20,UniRef:UniRef90_A0A5D0EKB2 contig_18 Pyrodigal gene 100338 101780 . - . ID=GCA008085315_01075_gene;locus_tag=GCA008085315_01075 contig_18 Pyrodigal CDS 100338 101780 . - 0 ID=GCA008085315_01075;Name=DUF560 domain-containing protein;locus_tag=GCA008085315_01075;product=DUF560 domain-containing protein;Parent=GCA008085315_01075_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_Q4QLR4,UniRef:UniRef90_A0A142G0Y3 contig_18 Pyrodigal gene 101845 102609 . - . ID=GCA008085315_01076_gene;locus_tag=GCA008085315_01076 contig_18 Pyrodigal CDS 101845 102609 . - 0 ID=GCA008085315_01076;Name=Slam-dependent surface lipoprotein;locus_tag=GCA008085315_01076;product=Slam-dependent surface lipoprotein;Parent=GCA008085315_01076_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148333967.1,SO:0001217,UniParc:UPI0011D849B0,UniRef:UniRef100_UPI0011D849B0,UniRef:UniRef50_A0A5D0EM55,UniRef:UniRef90_A0A5D0EM55 contig_18 Pyrodigal gene 102906 104252 . - . ID=GCA008085315_01077_gene;locus_tag=GCA008085315_01077;gene=accC contig_18 Pyrodigal CDS 102906 104252 . - 0 ID=GCA008085315_01077;Name=acetyl-CoA carboxylase biotin carboxylase subunit;locus_tag=GCA008085315_01077;product=acetyl-CoA carboxylase biotin carboxylase subunit;Dbxref=GO:0003989,GO:0004075,GO:0005524,GO:0006633,GO:0009317,GO:0016874,GO:0046872,GO:2001295;gene=accC;Parent=GCA008085315_01077_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0439,COG:I,RefSeq:WP_148333968.1,SO:0001217,UniParc:UPI0011D82316,UniRef:UniRef100_UPI0011D82316,UniRef:UniRef50_P24182,UniRef:UniRef90_P43873;ec_number=6.3.4.14 contig_18 Pyrodigal gene 104295 104762 . - . ID=GCA008085315_01078_gene;locus_tag=GCA008085315_01078;gene=accB contig_18 Pyrodigal CDS 104295 104762 . - 0 ID=GCA008085315_01078;Name=acetyl-CoA carboxylase biotin carboxyl carrier protein;locus_tag=GCA008085315_01078;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;Dbxref=GO:0003989,GO:0006633,GO:0009317;gene=accB;Parent=GCA008085315_01078_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0511,COG:I,RefSeq:WP_005547578.1,SO:0001217,UniParc:UPI0001B9F54A,UniRef:UniRef100_UPI0001B9F54A,UniRef:UniRef50_P0ABD8,UniRef:UniRef90_A0A142G0Y0;ec_number=6.4.1.2 contig_18 Pyrodigal gene 104886 105362 . - . ID=GCA008085315_01079_gene;locus_tag=GCA008085315_01079;gene=aroQ contig_18 Pyrodigal CDS 104886 105362 . - 0 ID=GCA008085315_01079;Name=type II 3-dehydroquinate dehydratase;locus_tag=GCA008085315_01079;product=type II 3-dehydroquinate dehydratase;Dbxref=GO:0003855,GO:0009423;gene=aroQ;Parent=GCA008085315_01079_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0757,COG:E,KEGG:K03786,RefSeq:WP_005547582.1,SO:0001217,UniParc:UPI0001B9F54C,UniRef:UniRef100_UPI0001B9F54C,UniRef:UniRef50_P05147,UniRef:UniRef90_A0A142G0X9;ec_number=4.2.1.10 contig_18 Pyrodigal gene 105461 106462 . - . ID=GCA008085315_01080_gene;locus_tag=GCA008085315_01080;gene=menC contig_18 Pyrodigal CDS 105461 106462 . - 0 ID=GCA008085315_01080;Name=o-succinylbenzoate synthase;locus_tag=GCA008085315_01080;product=o-succinylbenzoate synthase;Dbxref=GO:0000287,GO:0009234,GO:0016836;gene=menC;Parent=GCA008085315_01080_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1441,COG:H,KEGG:K02549,RefSeq:WP_005547584.1,SO:0001217,UniParc:UPI0001B9F54D,UniRef:UniRef100_UPI0001B9F54D,UniRef:UniRef50_P29208,UniRef:UniRef90_A0A142G0X8;ec_number=4.2.1.113 contig_18 Pyrodigal gene 106443 106772 . - . ID=GCA008085315_01081_gene;locus_tag=GCA008085315_01081 contig_18 Pyrodigal CDS 106443 106772 . - 0 ID=GCA008085315_01081;Name=DNA polymerase;locus_tag=GCA008085315_01081;product=DNA polymerase;Parent=GCA008085315_01081_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005574816.1,SO:0001217,UniParc:UPI0001B9F54E,UniRef:UniRef100_UPI0001B9F54E,UniRef:UniRef50_A0A2W4X5J1,UniRef:UniRef90_A0A142G0X7 contig_18 Pyrodigal gene 106754 107173 . - . ID=GCA008085315_01082_gene;locus_tag=GCA008085315_01082 contig_18 Pyrodigal CDS 106754 107173 . - 0 ID=GCA008085315_01082;Name=Nucleotidyltransferase;locus_tag=GCA008085315_01082;product=Nucleotidyltransferase;Parent=GCA008085315_01082_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005547589.1,SO:0001217,UniParc:UPI0001B9F54F,UniRef:UniRef100_UPI0001B9F54F,UniRef:UniRef50_A0A4R1KW94,UniRef:UniRef90_A0A5D0EHX3 contig_18 Pyrodigal gene 107213 108070 . - . ID=GCA008085315_01083_gene;locus_tag=GCA008085315_01083;gene=menB contig_18 Pyrodigal CDS 107213 108070 . - 0 ID=GCA008085315_01083;Name=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;locus_tag=GCA008085315_01083;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;Dbxref=GO:0005829,GO:0008935,GO:0009234;gene=menB;Parent=GCA008085315_01083_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0447,COG:H,RefSeq:WP_005547592.1,SO:0001217,UniParc:UPI0001B9F550,UniRef:UniRef100_UPI0001B9F550,UniRef:UniRef50_P23966,UniRef:UniRef90_P44960;ec_number=4.1.3.36 contig_18 Pyrodigal gene 108182 108949 . - . ID=GCA008085315_01084_gene;locus_tag=GCA008085315_01084;gene=tpiA contig_18 Pyrodigal CDS 108182 108949 . - 0 ID=GCA008085315_01084;Name=triose-phosphate isomerase;locus_tag=GCA008085315_01084;product=triose-phosphate isomerase;Dbxref=GO:0004807,GO:0005829,GO:0006094,GO:0006096,GO:0019563,GO:0046166;gene=tpiA;Parent=GCA008085315_01084_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0149,COG:G,RefSeq:WP_005574817.1,SO:0001217,UniParc:UPI00022ACF67,UniRef:UniRef100_UPI00022ACF67,UniRef:UniRef50_P0A858,UniRef:UniRef90_P43727;ec_number=5.3.1.1 contig_18 Pyrodigal gene 109122 109565 . + . ID=GCA008085315_01085_gene;locus_tag=GCA008085315_01085 contig_18 Pyrodigal CDS 109122 109565 . + 0 ID=GCA008085315_01085;Name=GNAT family N-acetyltransferase;locus_tag=GCA008085315_01085;product=GNAT family N-acetyltransferase;Parent=GCA008085315_01085_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005547595.1,SO:0001217,UniParc:UPI0001B9F552,UniRef:UniRef100_UPI0001B9F552,UniRef:UniRef50_P44036,UniRef:UniRef90_A0A5D0KUZ7 contig_18 Pyrodigal gene 109639 111006 . - . ID=GCA008085315_01086_gene;locus_tag=GCA008085315_01086;gene=hemN contig_18 Pyrodigal CDS 109639 111006 . - 0 ID=GCA008085315_01086;Name=oxygen-independent coproporphyrinogen III oxidase;locus_tag=GCA008085315_01086;product=oxygen-independent coproporphyrinogen III oxidase;Dbxref=GO:0004109,GO:0005737,GO:0006779;gene=hemN;Parent=GCA008085315_01086_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0635,COG:H,RefSeq:WP_005547597.1,SO:0001217,UniParc:UPI0001B9F553,UniRef:UniRef100_UPI0001B9F553,UniRef:UniRef50_P32131,UniRef:UniRef90_E6KW12;ec_number=1.3.98.3 contig_18 Pyrodigal gene 111025 111459 . - . ID=GCA008085315_01087_gene;locus_tag=GCA008085315_01087 contig_18 Pyrodigal CDS 111025 111459 . - 0 ID=GCA008085315_01087;Name=DUF2489 domain-containing protein;locus_tag=GCA008085315_01087;product=DUF2489 domain-containing protein;Parent=GCA008085315_01087_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005540740.1,SO:0001217,UniParc:UPI0001B9F554,UniRef:UniRef100_A0A142G0X2,UniRef:UniRef50_A6VLB2,UniRef:UniRef90_G4A9Z2 contig_18 Pyrodigal gene 111472 112032 . - . ID=GCA008085315_01088_gene;locus_tag=GCA008085315_01088;gene=yihI contig_18 Pyrodigal CDS 111472 112032 . - 0 ID=GCA008085315_01088;Name=Der GTPase-activating protein YihI;locus_tag=GCA008085315_01088;product=Der GTPase-activating protein YihI;gene=yihI;Parent=GCA008085315_01088_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3078,COG:J,KEGG:K09894,RefSeq:WP_005547599.1,SO:0001217,UniParc:UPI0001B9F555,UniRef:UniRef100_UPI0001B9F555,UniRef:UniRef50_Q0I282,UniRef:UniRef90_A0A5D0EIC0 contig_18 Pyrodigal gene 112133 112660 . - . ID=GCA008085315_01089_gene;locus_tag=GCA008085315_01089;gene=tadA contig_18 Pyrodigal CDS 112133 112660 . - 0 ID=GCA008085315_01089;Name=tRNA adenosine(34) deaminase TadA;locus_tag=GCA008085315_01089;product=tRNA adenosine(34) deaminase TadA;Dbxref=GO:0002100,GO:0008251,GO:0008270;gene=tadA;Parent=GCA008085315_01089_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0590,COG:J,KEGG:K11991,RefSeq:WP_005547601.1,SO:0001217,UniParc:UPI0001B9F556,UniRef:UniRef100_UPI0001B9F556,UniRef:UniRef50_P44931,UniRef:UniRef90_A0A142G1X8;ec_number=3.5.4.33 contig_18 Infernal gene 112823 112913 . - . ID=GCA008085315_01090_gene;locus_tag=GCA008085315_01090;gene=AaHKsRNA22 contig_18 Infernal ncRNA 112823 112913 1e-05 - . ID=GCA008085315_01090;Name=Aggregatibacter sRNA 22;locus_tag=GCA008085315_01090;product=Aggregatibacter sRNA 22;Dbxref=RFAM:RF02902;Parent=GCA008085315_01090_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02902 contig_18 Pyrodigal gene 112986 113837 . - . ID=GCA008085315_01091_gene;locus_tag=GCA008085315_01091;gene=thyA contig_18 Pyrodigal CDS 112986 113837 . - 0 ID=GCA008085315_01091;Name=thymidylate synthase;locus_tag=GCA008085315_01091;product=thymidylate synthase;gene=thyA;Parent=GCA008085315_01091_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0207,COG:F,KEGG:K00560,RefSeq:WP_005567929.1,SO:0001217,UniParc:UPI00022AC30C,UniRef:UniRef100_UPI00022AC30C,UniRef:UniRef50_Q5E7P1,UniRef:UniRef90_A0A142G1X6;ec_number=2.1.1.45 contig_18 Pyrodigal gene 113834 114631 . - . ID=GCA008085315_01092_gene;locus_tag=GCA008085315_01092;gene=lgt contig_18 Pyrodigal CDS 113834 114631 . - 0 ID=GCA008085315_01092;Name=prolipoprotein diacylglyceryl transferase;locus_tag=GCA008085315_01092;product=prolipoprotein diacylglyceryl transferase;Dbxref=GO:0008961,GO:0009249,GO:0016020;gene=lgt;Parent=GCA008085315_01092_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0682,COG:M,RefSeq:WP_005547605.1,SO:0001217,UniParc:UPI0001B9F558,UniRef:UniRef100_UPI0001B9F558,UniRef:UniRef50_P60955,UniRef:UniRef90_E6KW07;ec_number=2.5.1.145 contig_18 Pyrodigal gene 114640 115437 . - . ID=GCA008085315_01093_gene;locus_tag=GCA008085315_01093;gene=tauE contig_18 Pyrodigal CDS 114640 115437 . - 0 ID=GCA008085315_01093;Name=putative membrane transporter protein;locus_tag=GCA008085315_01093;product=putative membrane transporter protein;gene=tauE;Parent=GCA008085315_01093_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0730,COG:P,RefSeq:WP_005567927.1,SO:0001217,UniParc:UPI00022AC30B,UniRef:UniRef100_UPI00022AC30B,UniRef:UniRef50_P44070,UniRef:UniRef90_E6KW06 contig_18 Pyrodigal gene 115440 116039 . - . ID=GCA008085315_01094_gene;locus_tag=GCA008085315_01094;gene=rppH contig_18 Pyrodigal CDS 115440 116039 . - 0 ID=GCA008085315_01094;Name=RNA pyrophosphohydrolase;locus_tag=GCA008085315_01094;product=RNA pyrophosphohydrolase;Dbxref=GO:0016787;gene=rppH;Parent=GCA008085315_01094_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0494,COG:V,RefSeq:WP_005547610.1,SO:0001217,UniParc:UPI0001B9F5CB,UniRef:UniRef100_UPI0001B9F5CB,UniRef:UniRef50_A3N3J1,UniRef:UniRef90_A0A142G1X3;ec_number=3.6.1.- contig_18 Pyrodigal gene 116259 116678 . + . ID=GCA008085315_01095_gene;locus_tag=GCA008085315_01095;gene=rbsD contig_18 Pyrodigal CDS 116259 116678 . + 0 ID=GCA008085315_01095;Name=D-ribose pyranase;locus_tag=GCA008085315_01095;product=D-ribose pyranase;Dbxref=GO:0016872;gene=rbsD;Parent=GCA008085315_01095_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1869,COG:G,KEGG:K06726,RefSeq:WP_005547612.1,SO:0001217,UniParc:UPI0001B9F5CC,UniRef:UniRef100_UPI0001B9F5CC,UniRef:UniRef50_P04982,UniRef:UniRef90_A0A5D0EJY3;ec_number=5.4.99.62 contig_18 Pyrodigal gene 116689 117816 . + . ID=GCA008085315_01096_gene;locus_tag=GCA008085315_01096 contig_18 Pyrodigal CDS 116689 117816 . + 0 ID=GCA008085315_01096;Name=Ribose ABC transport system;locus_tag=GCA008085315_01096;product=Ribose ABC transport system;Parent=GCA008085315_01096_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A2X3GG12 contig_18 Pyrodigal gene 117803 118195 . + . ID=GCA008085315_01097_gene;locus_tag=GCA008085315_01097 contig_18 Pyrodigal CDS 117803 118195 . + 0 ID=GCA008085315_01097;Name=Ribose ABC transport system;locus_tag=GCA008085315_01097;product=Ribose ABC transport system;Parent=GCA008085315_01097_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A0B8NRY5 contig_18 Pyrodigal gene 118192 119088 . + . ID=GCA008085315_01098_gene;locus_tag=GCA008085315_01098;gene=rbsC contig_18 Pyrodigal CDS 118192 119088 . + 0 ID=GCA008085315_01098;Name=ribose ABC transporter permease;locus_tag=GCA008085315_01098;product=ribose ABC transporter permease;Dbxref=GO:0016020,GO:0022857,GO:0055085;gene=rbsC;Parent=GCA008085315_01098_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A090ISJ1,UniRef:UniRef90_A0A5D0EL11 contig_18 Pyrodigal gene 119178 120050 . + . ID=GCA008085315_01099_gene;locus_tag=GCA008085315_01099;gene=rbsB contig_18 Pyrodigal CDS 119178 120050 . + 0 ID=GCA008085315_01099;Name=ribose ABC transporter substrate-binding protein RbsB;locus_tag=GCA008085315_01099;product=ribose ABC transporter substrate-binding protein RbsB;gene=rbsB;Parent=GCA008085315_01099_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1879,COG:G,RefSeq:WP_005567919.1,SO:0001217,UniParc:UPI00022AE273,UniRef:UniRef100_UPI00022AE273,UniRef:UniRef50_P44737,UniRef:UniRef90_A0A5D0EM90 contig_18 Pyrodigal gene 120133 121065 . + . ID=GCA008085315_01100_gene;locus_tag=GCA008085315_01100;gene=rbsK contig_18 Pyrodigal CDS 120133 121065 . + 0 ID=GCA008085315_01100;Name=ribokinase;locus_tag=GCA008085315_01100;product=ribokinase;Dbxref=GO:0004747,GO:0006014;gene=rbsK;Parent=GCA008085315_01100_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0524,COG:G,KEGG:K00852,RefSeq:WP_005547620.1,SO:0001217,UniParc:UPI0001B9F5D0,UniRef:UniRef100_UPI0001B9F5D0,UniRef:UniRef50_A0A1M7YXK1,UniRef:UniRef90_A0A5D0EJI0;ec_number=2.7.1.15 contig_18 Pyrodigal gene 121163 121372 . - . ID=GCA008085315_01101_gene;locus_tag=GCA008085315_01101;gene=cspC contig_18 Pyrodigal CDS 121163 121372 . - 0 ID=GCA008085315_01101;Name=CspA family cold shock transcriptional regulator;locus_tag=GCA008085315_01101;product=CspA family cold shock transcriptional regulator;gene=cspC;Parent=GCA008085315_01101_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1278,COG:K,KEGG:K03704,RefSeq:WP_005547622.1,SO:0001217,UniParc:UPI0001B9F5D1,UniRef:UniRef100_UPI0001B9F5D1,UniRef:UniRef50_A7ME79,UniRef:UniRef90_E6KWN5 contig_18 tRNAscan-SE gene 121665 121740 . - . ID=GCA008085315_01102_gene;locus_tag=GCA008085315_01102;gene=trnA contig_18 tRNAscan-SE tRNA 121665 121740 . - . ID=GCA008085315_01102;Name=tRNA-Ala(ggc);locus_tag=GCA008085315_01102;product=tRNA-Ala(ggc);gene=trnA;anti_codon=ggc;amino_acid=Ala;Parent=GCA008085315_01102_gene;inference=profile:tRNAscan:2.0;Note=SO:0000254 contig_18 Pyrodigal gene 121819 123264 . - . ID=GCA008085315_01103_gene;locus_tag=GCA008085315_01103;gene=gltX contig_18 Pyrodigal CDS 121819 123264 . - 0 ID=GCA008085315_01103;Name=glutamate--tRNA ligase;locus_tag=GCA008085315_01103;product=glutamate--tRNA ligase;Dbxref=GO:0000166,GO:0004818,GO:0005524,GO:0006424;gene=gltX;Parent=GCA008085315_01103_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0008,COG:J,RefSeq:WP_005547624.1,SO:0001217,UniParc:UPI0001B9F5D3,UniRef:UniRef100_UPI0001B9F5D3,UniRef:UniRef50_P04805,UniRef:UniRef90_A0A5D0EJR2;ec_number=6.1.1.17 contig_18 tRNAscan-SE gene 123550 123625 . + . ID=GCA008085315_01104_gene;locus_tag=GCA008085315_01104;gene=trnV contig_18 tRNAscan-SE tRNA 123550 123625 . + . ID=GCA008085315_01104;Name=tRNA-Val(tac);locus_tag=GCA008085315_01104;product=tRNA-Val(tac);gene=trnV;anti_codon=tac;amino_acid=Val;Parent=GCA008085315_01104_gene;inference=profile:tRNAscan:2.0;Note=SO:0000273 contig_18 tRNAscan-SE gene 123664 123739 . + . ID=GCA008085315_01105_gene;locus_tag=GCA008085315_01105;gene=trnV contig_18 tRNAscan-SE tRNA 123664 123739 . + . ID=GCA008085315_01105;Name=tRNA-Val(tac);locus_tag=GCA008085315_01105;product=tRNA-Val(tac);gene=trnV;anti_codon=tac;amino_acid=Val;Parent=GCA008085315_01105_gene;inference=profile:tRNAscan:2.0;Note=SO:0000273 contig_18 tRNAscan-SE gene 123767 123842 . + . ID=GCA008085315_01106_gene;locus_tag=GCA008085315_01106;gene=trnV contig_18 tRNAscan-SE tRNA 123767 123842 . + . ID=GCA008085315_01106;Name=tRNA-Val(tac);locus_tag=GCA008085315_01106;product=tRNA-Val(tac);gene=trnV;anti_codon=tac;amino_acid=Val;Parent=GCA008085315_01106_gene;inference=profile:tRNAscan:2.0;Note=SO:0000273 contig_18 Pyrodigal gene 123952 124740 . + . ID=GCA008085315_01107_gene;locus_tag=GCA008085315_01107;gene=oCH1 contig_18 Pyrodigal CDS 123952 124740 . + 0 ID=GCA008085315_01107;Name=Glycosyl transferase;locus_tag=GCA008085315_01107;product=Glycosyl transferase;gene=oCH1;Parent=GCA008085315_01107_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3774,COG:M,RefSeq:WP_005547626.1,SO:0001217,UniParc:UPI0001B9F5D4,UniRef:UniRef100_UPI0001B9F5D4,UniRef:UniRef50_Q9CLU0,UniRef:UniRef90_A0A142G1R0 contig_18 Pyrodigal gene 124853 126229 . + . ID=GCA008085315_01108_gene;locus_tag=GCA008085315_01108;gene=argH contig_18 Pyrodigal CDS 124853 126229 . + 0 ID=GCA008085315_01108;Name=argininosuccinate lyase;locus_tag=GCA008085315_01108;product=argininosuccinate lyase;Dbxref=GO:0004056,GO:0042450;gene=argH;Parent=GCA008085315_01108_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0165,COG:E,KEGG:K01755,RefSeq:WP_005547628.1,SO:0001217,UniParc:UPI00022AD3B6,UniRef:UniRef100_UPI00022AD3B6,UniRef:UniRef50_E6KW02,UniRef:UniRef90_E6KW02;ec_number=4.3.2.1 contig_18 Pyrodigal gene 126531 127880 . + . ID=GCA008085315_01109_gene;locus_tag=GCA008085315_01109;gene=gdhA contig_18 Pyrodigal CDS 126531 127880 . + 0 ID=GCA008085315_01109;Name=NADP-specific glutamate dehydrogenase;locus_tag=GCA008085315_01109;product=NADP-specific glutamate dehydrogenase;Dbxref=GO:0006520,GO:0016639;gene=gdhA;Parent=GCA008085315_01109_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0334,COG:E,RefSeq:WP_005547630.1,SO:0001217,UniParc:UPI0001B9F5D6,UniRef:UniRef100_UPI0001B9F5D6,UniRef:UniRef50_E6KW01,UniRef:UniRef90_E6KW01;ec_number=1.4.1.4 contig_18 Pyrodigal gene 128369 129823 . + . ID=GCA008085315_01110_gene;locus_tag=GCA008085315_01110;gene=katE contig_18 Pyrodigal CDS 128369 129823 . + 0 ID=GCA008085315_01110;Name=Catalase;locus_tag=GCA008085315_01110;product=Catalase;gene=katE;Parent=GCA008085315_01110_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0753,COG:P,KEGG:K03781,RefSeq:WP_005547635.1,SO:0001217,UniParc:UPI00000AFBEA,UniRef:UniRef100_Q9RG14,UniRef:UniRef50_P42321,UniRef:UniRef90_Q9RG14;ec_number=1.11.1.6 contig_18 Pyrodigal gene 130952 134428 . - . ID=GCA008085315_01111_gene;locus_tag=GCA008085315_01111;gene=dnaE contig_18 Pyrodigal CDS 130952 134428 . - 0 ID=GCA008085315_01111;Name=DNA polymerase III subunit alpha;locus_tag=GCA008085315_01111;product=DNA polymerase III subunit alpha;Dbxref=GO:0003676,GO:0006260,GO:0008408;gene=dnaE;Parent=GCA008085315_01111_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0587,COG:L,KEGG:K02337,RefSeq:WP_005566976.1,SO:0001217,UniParc:UPI00022ADE8E,UniRef:UniRef100_UPI00022ADE8E,UniRef:UniRef50_Q9HXZ1,UniRef:UniRef90_A0A5D0ELI1;ec_number=2.7.7.7 contig_18 Pyrodigal gene 134627 136414 . + . ID=GCA008085315_01112_gene;locus_tag=GCA008085315_01112;gene=fAA1 contig_18 Pyrodigal CDS 134627 136414 . + 0 ID=GCA008085315_01112;Name=Long-chain-fatty-acid--CoA ligase;locus_tag=GCA008085315_01112;product=Long-chain-fatty-acid--CoA ligase;gene=fAA1;Parent=GCA008085315_01112_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1022,COG:I,RefSeq:WP_005547641.1,SO:0001217,UniParc:UPI0001B9F5DA,UniRef:UniRef100_UPI0001B9F5DA,UniRef:UniRef50_P44446,UniRef:UniRef90_E6KVZ8 contig_18 Pyrodigal gene 136759 142656 . + . ID=GCA008085315_01113_gene;locus_tag=GCA008085315_01113;gene=emaA contig_18 Pyrodigal CDS 136759 142656 . + 0 ID=GCA008085315_01113;Name=trimeric autotransporter adhesin EmaA;locus_tag=GCA008085315_01113;product=trimeric autotransporter adhesin EmaA;gene=emaA;Parent=GCA008085315_01113_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_005594030,BlastRules:WP_084821567,COG:COG5295,COG:UW,RefSeq:WP_148321303.1,SO:0001217,UniParc:UPI0011D67DB3,UniRef:UniRef100_UPI0011D67DB3,UniRef:UniRef50_A0A448F882,UniRef:UniRef90_A0FEX1 contig_18 Pyrodigal gene 142910 145036 . + . ID=GCA008085315_01114_gene;locus_tag=GCA008085315_01114;gene=nrdD contig_18 Pyrodigal CDS 142910 145036 . + 0 ID=GCA008085315_01114;Name=anaerobic ribonucleoside-triphosphate reductase;locus_tag=GCA008085315_01114;product=anaerobic ribonucleoside-triphosphate reductase;Dbxref=GO:0006260,GO:0008998;gene=nrdD;Parent=GCA008085315_01114_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1328,COG:F,RefSeq:WP_005547649.1,SO:0001217,UniParc:UPI0001B9F5DD,UniRef:UniRef100_UPI0001B9F5DD,UniRef:UniRef50_P28903,UniRef:UniRef90_E6KVZ7;ec_number=1.17.4.2 contig_18 Infernal gene 145412 145512 . + . ID=GCA008085315_01115_gene;locus_tag=GCA008085315_01115;gene=AaHKsRNA22 contig_18 Infernal ncRNA 145412 145512 2.6e-10 + . ID=GCA008085315_01115;Name=Aggregatibacter sRNA 22;locus_tag=GCA008085315_01115;product=Aggregatibacter sRNA 22;Dbxref=RFAM:RF02902;Parent=GCA008085315_01115_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02902 contig_18 Pyrodigal gene 145638 146105 . + . ID=GCA008085315_01116_gene;locus_tag=GCA008085315_01116;gene=nrdG contig_18 Pyrodigal CDS 145638 146105 . + 0 ID=GCA008085315_01116;Name=anaerobic ribonucleoside-triphosphate reductase-activating protein;locus_tag=GCA008085315_01116;product=anaerobic ribonucleoside-triphosphate reductase-activating protein;Dbxref=GO:0043365,GO:0051539;gene=nrdG;Parent=GCA008085315_01116_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0602,COG:H,KEGG:K04068,RefSeq:WP_005547651.1,SO:0001217,UniParc:UPI0001B9F5E0,UniRef:UniRef100_UPI0001B9F5E0,UniRef:UniRef50_P0A9N8,UniRef:UniRef90_E6KVZ5;ec_number=1.97.1.4 contig_18 Pyrodigal gene 146132 146920 . - . ID=GCA008085315_01117_gene;locus_tag=GCA008085315_01117;gene=tatD contig_18 Pyrodigal CDS 146132 146920 . - 0 ID=GCA008085315_01117;Name=Deoxyribonuclease;locus_tag=GCA008085315_01117;product=Deoxyribonuclease;gene=tatD;Parent=GCA008085315_01117_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0084,COG:N,KEGG:K03424,RefSeq:WP_005547653.1,SO:0001217,UniParc:UPI0001B9F5E1,UniRef:UniRef100_UPI0001B9F5E1,UniRef:UniRef50_P44500,UniRef:UniRef90_A0A5D0EIW1;ec_number=3.1.21.- contig_18 Pyrodigal gene 146923 147204 . - . ID=GCA008085315_01118_gene;locus_tag=GCA008085315_01118;gene=parE contig_18 Pyrodigal CDS 146923 147204 . - 0 ID=GCA008085315_01118;Name=Plasmid stabilization protein;locus_tag=GCA008085315_01118;product=Plasmid stabilization protein;gene=parE;Parent=GCA008085315_01118_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3668,COG:X,RefSeq:WP_005547656.1,SO:0001217,UniParc:UPI0001B9F5E2,UniRef:UniRef100_UPI0001B9F5E2,UniRef:UniRef50_A0A5D0EJS5,UniRef:UniRef90_A0A5D0EJS5 contig_18 Pyrodigal gene 147197 147355 . - . ID=GCA008085315_01119_gene;locus_tag=GCA008085315_01119 contig_18 Pyrodigal CDS 147197 147355 . - 0 ID=GCA008085315_01119;Name=hypothetical protein;locus_tag=GCA008085315_01119;product=hypothetical protein;Parent=GCA008085315_01119_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005547658.1,SO:0001217,UniParc:UPI00022AC392,UniRef:UniRef100_UPI00022AC392,UniRef:UniRef50_G4A9V6,UniRef:UniRef90_G4A9V6 contig_18 Pyrodigal gene 147446 147958 . - . ID=GCA008085315_01120_gene;locus_tag=GCA008085315_01120;gene=ppiB contig_18 Pyrodigal CDS 147446 147958 . - 0 ID=GCA008085315_01120;Name=Peptidyl-prolyl cis-trans isomerase;locus_tag=GCA008085315_01120;product=Peptidyl-prolyl cis-trans isomerase;gene=ppiB;Parent=GCA008085315_01120_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0652,COG:O,RefSeq:WP_148320849.1,SO:0001217,UniParc:UPI0011D3D413,UniRef:UniRef100_UPI0011D3D413,UniRef:UniRef50_A0A5J4EB96,UniRef:UniRef90_I3D7M2 contig_18 Pyrodigal gene 148058 149437 . + . ID=GCA008085315_01121_gene;locus_tag=GCA008085315_01121;gene=cysS contig_18 Pyrodigal CDS 148058 149437 . + 0 ID=GCA008085315_01121;Name=cysteine--tRNA ligase;locus_tag=GCA008085315_01121;product=cysteine--tRNA ligase;Dbxref=GO:0004817,GO:0005524,GO:0005737,GO:0005829,GO:0006423,GO:0008270;gene=cysS;Parent=GCA008085315_01121_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0215,COG:J,KEGG:K01883,RefSeq:WP_025298090.1,SO:0001217,UniParc:UPI0004375529,UniRef:UniRef100_UPI0004375529,UniRef:UniRef50_P43816,UniRef:UniRef90_P43816;ec_number=6.1.1.16 contig_18 Pyrodigal gene 149585 150547 . - . ID=GCA008085315_01122_gene;locus_tag=GCA008085315_01122;gene=lipA contig_18 Pyrodigal CDS 149585 150547 . - 0 ID=GCA008085315_01122;Name=lipoyl synthase;locus_tag=GCA008085315_01122;product=lipoyl synthase;Dbxref=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gene=lipA;Parent=GCA008085315_01122_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0320,COG:H,KEGG:K03644,RefSeq:WP_005547662.1,SO:0001217,UniParc:UPI0001B9F5E6,UniRef:UniRef100_G4A9V3,UniRef:UniRef50_P60716,UniRef:UniRef90_G4A9V3;ec_number=2.8.1.8 contig_18 Pyrodigal gene 150612 151250 . - . ID=GCA008085315_01123_gene;locus_tag=GCA008085315_01123;gene=lipB contig_18 Pyrodigal CDS 150612 151250 . - 0 ID=GCA008085315_01123;Name=lipoyl(octanoyl) transferase LipB;locus_tag=GCA008085315_01123;product=lipoyl(octanoyl) transferase LipB;Dbxref=GO:0009249,GO:0033819;gene=lipB;Parent=GCA008085315_01123_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0321,COG:H,RefSeq:WP_005547664.1,SO:0001217,UniParc:UPI0001B9F5E7,UniRef:UniRef100_UPI0001B9F5E7,UniRef:UniRef50_P44464,UniRef:UniRef90_A0A142G0B8;ec_number=2.3.1.181 contig_18 Pyrodigal gene 151296 151595 . - . ID=GCA008085315_01124_gene;locus_tag=GCA008085315_01124;gene=ybeD contig_18 Pyrodigal CDS 151296 151595 . - 0 ID=GCA008085315_01124;Name=DUF493 domain-containing protein;locus_tag=GCA008085315_01124;product=DUF493 domain-containing protein;gene=ybeD;Parent=GCA008085315_01124_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2921,COG:T,RefSeq:WP_005544448.1,SO:0001217,UniParc:UPI0001B9F5E8,UniRef:UniRef100_A0A142G0B7,UniRef:UniRef50_Q9CJR4,UniRef:UniRef90_A0A142G0B7 contig_18 Pyrodigal gene 151668 152858 . - . ID=GCA008085315_01125_gene;locus_tag=GCA008085315_01125;gene=dacC contig_18 Pyrodigal CDS 151668 152858 . - 0 ID=GCA008085315_01125;Name=serine-type D-Ala-D-Ala carboxypeptidase;locus_tag=GCA008085315_01125;product=serine-type D-Ala-D-Ala carboxypeptidase;gene=dacC;Parent=GCA008085315_01125_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1686,COG:M,KEGG:K07258,RefSeq:WP_005544450.1,SO:0001217,UniParc:UPI0001B9F5E9,UniRef:UniRef100_A0A5D0KYC1,UniRef:UniRef50_P0AEB2,UniRef:UniRef90_A0A5D0KYC1;ec_number=3.4.16.4 contig_18 Pyrodigal gene 152889 153746 . - . ID=GCA008085315_01126_gene;locus_tag=GCA008085315_01126;gene=rlpA contig_18 Pyrodigal CDS 152889 153746 . - 0 ID=GCA008085315_01126;Name=Endolytic peptidoglycan transglycosylase RlpA;locus_tag=GCA008085315_01126;product=Endolytic peptidoglycan transglycosylase RlpA;gene=rlpA;Parent=GCA008085315_01126_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0797,COG:M,KEGG:K03642,RefSeq:WP_005547666.1,SO:0001217,UniParc:UPI0001B9F5EA,UniRef:UniRef100_UPI0001B9F5EA,UniRef:UniRef50_A0A142G0B5,UniRef:UniRef90_A0A142G0B5;ec_number=4.2.2.29 contig_18 Pyrodigal gene 153795 154916 . - . ID=GCA008085315_01127_gene;locus_tag=GCA008085315_01127;gene=rodA contig_18 Pyrodigal CDS 153795 154916 . - 0 ID=GCA008085315_01127;Name=rod shape-determining protein RodA;locus_tag=GCA008085315_01127;product=rod shape-determining protein RodA;Dbxref=GO:0008360,GO:0016020;gene=rodA;Parent=GCA008085315_01127_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0772,COG:D,KEGG:K05837,RefSeq:WP_005547668.1,SO:0001217,UniParc:UPI0001B9F5EB,UniRef:UniRef100_UPI0001B9F5EB,UniRef:UniRef50_A0A2H9U591,UniRef:UniRef90_E6KVY6 contig_18 Pyrodigal gene 154903 156864 . - . ID=GCA008085315_01128_gene;locus_tag=GCA008085315_01128;gene=mrdA contig_18 Pyrodigal CDS 154903 156864 . - 0 ID=GCA008085315_01128;Name=penicillin-binding protein 2;locus_tag=GCA008085315_01128;product=penicillin-binding protein 2;Dbxref=GO:0003824,GO:0008658,GO:0009252,GO:0016020;gene=mrdA;Parent=GCA008085315_01128_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0768,COG:DM,KEGG:K05515,RefSeq:WP_148320853.1,SO:0001217,UniParc:UPI0011D7C13C,UniRef:UniRef100_UPI0011D7C13C,UniRef:UniRef50_P0AD65,UniRef:UniRef90_A0A448FBR7;ec_number=3.4.16.4 contig_18 Pyrodigal gene 156877 157311 . - . ID=GCA008085315_01129_gene;locus_tag=GCA008085315_01129;gene=rlmH contig_18 Pyrodigal CDS 156877 157311 . - 0 ID=GCA008085315_01129;Name=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;locus_tag=GCA008085315_01129;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;Dbxref=GO:0005737,GO:0006364,GO:0008168,GO:0070038;gene=rlmH;Parent=GCA008085315_01129_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1576,COG:J,KEGG:K00783,SO:0001217,UniRef:UniRef50_P0A8I8,UniRef:UniRef90_A3N2P8;ec_number=2.1.1.177 contig_18 Pyrodigal gene 157404 157712 . - . ID=GCA008085315_01130_gene;locus_tag=GCA008085315_01130;gene=rsfS contig_18 Pyrodigal CDS 157404 157712 . - 0 ID=GCA008085315_01130;Name=ribosome silencing factor;locus_tag=GCA008085315_01130;product=ribosome silencing factor;Dbxref=GO:0017148,GO:0043022;gene=rsfS;Parent=GCA008085315_01130_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0799,COG:J,RefSeq:WP_005547673.1,SO:0001217,UniParc:UPI0001B9F65A,UniRef:UniRef100_UPI0001B9F65A,UniRef:UniRef50_P44471,UniRef:UniRef90_E6KVY3 contig_18 Pyrodigal gene 157779 159035 . - . ID=GCA008085315_01131_gene;locus_tag=GCA008085315_01131;gene=rhlB contig_18 Pyrodigal CDS 157779 159035 . - 0 ID=GCA008085315_01131;Name=ATP-dependent RNA helicase RhlB;locus_tag=GCA008085315_01131;product=ATP-dependent RNA helicase RhlB;Dbxref=GO:0003676,GO:0003724,GO:0005524;gene=rhlB;Parent=GCA008085315_01131_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0513,COG:L,RefSeq:WP_005589362.1,SO:0001217,UniParc:UPI0001B9F65B,UniRef:UniRef100_UPI0001B9F65B,UniRef:UniRef50_P0A8J8,UniRef:UniRef90_U1QKX1;ec_number=3.6.4.13 contig_18 Pyrodigal gene 159336 160598 . + . ID=GCA008085315_01132_gene;locus_tag=GCA008085315_01132;gene=rho contig_18 Pyrodigal CDS 159336 160598 . + 0 ID=GCA008085315_01132;Name=transcription termination factor Rho;locus_tag=GCA008085315_01132;product=transcription termination factor Rho;Dbxref=GO:0003723,GO:0004386,GO:0005524,GO:0005829,GO:0006353,GO:0008186,GO:0016887;gene=rho;Parent=GCA008085315_01132_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1158,COG:K,RefSeq:WP_005544463.1,SO:0001217,UniParc:UPI00022AC50F,UniRef:UniRef100_A0A142G0B0,UniRef:UniRef50_P0AG30,UniRef:UniRef90_P44619;ec_number=3.6.4.- contig_18 Pyrodigal gene 160723 161958 . - . ID=GCA008085315_01133_gene;locus_tag=GCA008085315_01133;gene=araJ contig_18 Pyrodigal CDS 160723 161958 . - 0 ID=GCA008085315_01133;Name=MFS transporter;locus_tag=GCA008085315_01133;product=MFS transporter;gene=araJ;Parent=GCA008085315_01133_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2814,COG:G,RefSeq:WP_148320855.1,SO:0001217,UniParc:UPI0011DC341B,UniRef:UniRef100_UPI0011DC341B,UniRef:UniRef50_P71369,UniRef:UniRef90_A0A5D0ELV7 contig_18 Pyrodigal gene 162193 162423 . - . ID=GCA008085315_01134_gene;locus_tag=GCA008085315_01134;gene=acpP contig_18 Pyrodigal CDS 162193 162423 . - 0 ID=GCA008085315_01134;Name=acyl carrier protein;locus_tag=GCA008085315_01134;product=acyl carrier protein;Dbxref=GO:0000035,GO:0000036,GO:0005829,GO:0006633,GO:0009245,GO:0016020;gene=acpP;Parent=GCA008085315_01134_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0236,COG:I,RefSeq:WP_005544465.1,SO:0001217,UniParc:UPI0000125370,UniRef:UniRef100_P43709,UniRef:UniRef50_P43709,UniRef:UniRef90_P43709 contig_18 Pyrodigal gene 162697 163425 . - . ID=GCA008085315_01135_gene;locus_tag=GCA008085315_01135;gene=fabG contig_18 Pyrodigal CDS 162697 163425 . - 0 ID=GCA008085315_01135;Name=3-oxoacyl-ACP reductase FabG;locus_tag=GCA008085315_01135;product=3-oxoacyl-ACP reductase FabG;Dbxref=GO:0004316,GO:0006633,GO:0051287;gene=fabG;Parent=GCA008085315_01135_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1028,COG:I,RefSeq:WP_005547683.1,SO:0001217,UniParc:UPI0001B9F65F,UniRef:UniRef100_UPI0001B9F65F,UniRef:UniRef50_P43713,UniRef:UniRef90_A0A142G0A7;ec_number=1.1.1.100 contig_18 Pyrodigal gene 163450 164388 . - . ID=GCA008085315_01136_gene;locus_tag=GCA008085315_01136;gene=fabD contig_18 Pyrodigal CDS 163450 164388 . - 0 ID=GCA008085315_01136;Name=ACP S-malonyltransferase;locus_tag=GCA008085315_01136;product=ACP S-malonyltransferase;Dbxref=GO:0004314,GO:0006633;gene=fabD;Parent=GCA008085315_01136_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0331,COG:I,RefSeq:WP_005547685.1,SO:0001217,UniParc:UPI0001B9F660,UniRef:UniRef100_UPI0001B9F660,UniRef:UniRef50_P0AAI9,UniRef:UniRef90_E6KVX5;ec_number=2.3.1.39 contig_18 Pyrodigal gene 164495 165445 . - . ID=GCA008085315_01137_gene;locus_tag=GCA008085315_01137;gene=fabH contig_18 Pyrodigal CDS 164495 165445 . - 0 ID=GCA008085315_01137;Name=Beta-ketoacyl-[acyl-carrier-protein] synthase III;locus_tag=GCA008085315_01137;product=Beta-ketoacyl-[acyl-carrier-protein] synthase III;gene=fabH;Parent=GCA008085315_01137_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0332,COG:I,RefSeq:WP_005544468.1,SO:0001217,UniParc:UPI0001B9F661,UniRef:UniRef100_A0A5D0EKS6,UniRef:UniRef50_P43711,UniRef:UniRef90_A0A3S4Q061 contig_18 Pyrodigal gene 165492 166511 . - . ID=GCA008085315_01138_gene;locus_tag=GCA008085315_01138;gene=plsX contig_18 Pyrodigal CDS 165492 166511 . - 0 ID=GCA008085315_01138;Name=phosphate acyltransferase PlsX;locus_tag=GCA008085315_01138;product=phosphate acyltransferase PlsX;Dbxref=GO:0008610,GO:0043811;gene=plsX;Parent=GCA008085315_01138_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0416,COG:I,KEGG:K03621,RefSeq:WP_005585968.1,SO:0001217,UniParc:UPI0002ABD22F,UniRef:UniRef100_UPI0002ABD22F,UniRef:UniRef50_A0A5D0EJX8,UniRef:UniRef90_A0A5D0EJX8;ec_number=2.3.1.274 contig_18 Pyrodigal gene 166538 166708 . - . ID=GCA008085315_01139_gene;locus_tag=GCA008085315_01139;gene=rpmF contig_18 Pyrodigal CDS 166538 166708 . - 0 ID=GCA008085315_01139;Name=50S ribosomal protein L32;locus_tag=GCA008085315_01139;product=50S ribosomal protein L32;Dbxref=GO:0003735,GO:0006412,GO:0015934;gene=rpmF;Parent=GCA008085315_01139_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0333,COG:J,RefSeq:WP_005544470.1,SO:0001217,UniParc:UPI0000168596,UniRef:UniRef100_P44368,UniRef:UniRef50_P44368,UniRef:UniRef90_P44368 contig_18 Pyrodigal gene 166725 167249 . - . ID=GCA008085315_01140_gene;locus_tag=GCA008085315_01140;gene=yceD contig_18 Pyrodigal CDS 166725 167249 . - 0 ID=GCA008085315_01140;Name=23S rRNA accumulation protein YceD;locus_tag=GCA008085315_01140;product=23S rRNA accumulation protein YceD;gene=yceD;Parent=GCA008085315_01140_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1399,COG:J,RefSeq:WP_005567749.1,SO:0001217,UniParc:UPI00022AC5AF,UniRef:UniRef100_UPI00022AC5AF,UniRef:UniRef50_P0AB28,UniRef:UniRef90_A0A142G0A2 contig_18 Pyrodigal gene 167321 167962 . - . ID=GCA008085315_01141_gene;locus_tag=GCA008085315_01141;gene=bioD contig_18 Pyrodigal CDS 167321 167962 . - 0 ID=GCA008085315_01141;Name=dethiobiotin synthase;locus_tag=GCA008085315_01141;product=dethiobiotin synthase;Dbxref=GO:0000287,GO:0004141,GO:0005524,GO:0009102;gene=bioD;Parent=GCA008085315_01141_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0132,COG:H,KEGG:K01935,RefSeq:WP_014167460.1,SO:0001217,UniParc:UPI00022BFF8F,UniRef:UniRef100_UPI00022BFF8F,UniRef:UniRef50_P45248,UniRef:UniRef90_A0A5D0EKU0;ec_number=6.3.3.3 contig_18 Pyrodigal gene 167962 168726 . - . ID=GCA008085315_01142_gene;locus_tag=GCA008085315_01142;gene=bioC contig_18 Pyrodigal CDS 167962 168726 . - 0 ID=GCA008085315_01142;Name=malonyl-ACP O-methyltransferase BioC;locus_tag=GCA008085315_01142;product=malonyl-ACP O-methyltransferase BioC;Dbxref=GO:0009102,GO:0010340;gene=bioC;Parent=GCA008085315_01142_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG4106,RefSeq:WP_148320859.1,SO:0001217,UniParc:UPI0011DA8812,UniRef:UniRef100_UPI0011DA8812,UniRef:UniRef50_E6KVW8,UniRef:UniRef90_A0A5D0ELA2;ec_number=2.1.1.197 contig_18 Pyrodigal gene 168720 169370 . - . ID=GCA008085315_01143_gene;locus_tag=GCA008085315_01143 contig_18 Pyrodigal CDS 168720 169370 . - 0 ID=GCA008085315_01143;Name=DUF452 domain-containing protein;locus_tag=GCA008085315_01143;product=DUF452 domain-containing protein;Parent=GCA008085315_01143_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2830,COG:S,KEGG:K09789,RefSeq:WP_005547695.1,SO:0001217,UniParc:UPI00022AC5AC,UniRef:UniRef100_UPI00022AC5AC,UniRef:UniRef50_A0A5D0ELV4,UniRef:UniRef90_A0A5D0ELV4;ec_number=3.1.1.85 contig_18 Pyrodigal gene 169351 170526 . - . ID=GCA008085315_01144_gene;locus_tag=GCA008085315_01144;gene=bioF contig_18 Pyrodigal CDS 169351 170526 . - 0 ID=GCA008085315_01144;Name=8-amino-7-oxononanoate synthase;locus_tag=GCA008085315_01144;product=8-amino-7-oxononanoate synthase;gene=bioF;Parent=GCA008085315_01144_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0156,COG:H,RefSeq:WP_005575808.1,SO:0001217,UniParc:UPI00022AD185,UniRef:UniRef100_UPI00022AD185,UniRef:UniRef50_A9M251,UniRef:UniRef90_A0A5D0ELU3 contig_18 Pyrodigal gene 170519 171808 . - . ID=GCA008085315_01145_gene;locus_tag=GCA008085315_01145;gene=bioA contig_18 Pyrodigal CDS 170519 171808 . - 0 ID=GCA008085315_01145;Name=adenosylmethionine--8-amino-7-oxononanoate transaminase;locus_tag=GCA008085315_01145;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;Dbxref=GO:0004015,GO:0009102,GO:0030170;gene=bioA;Parent=GCA008085315_01145_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0161,COG:H,KEGG:K00833,RefSeq:WP_148320862.1,SO:0001217,UniParc:UPI0011D669A5,UniRef:UniRef100_UPI0011D669A5,UniRef:UniRef50_P53656,UniRef:UniRef90_A0A5D0EME3;ec_number=2.6.1.62 contig_18 Pyrodigal gene 172031 172900 . + . ID=GCA008085315_01146_gene;locus_tag=GCA008085315_01146;gene=asd contig_18 Pyrodigal CDS 172031 172900 . + 0 ID=GCA008085315_01146;Name=archaetidylserine decarboxylase;locus_tag=GCA008085315_01146;product=archaetidylserine decarboxylase;Dbxref=GO:0004609,GO:0008654;gene=asd;Parent=GCA008085315_01146_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0688,COG:I,KEGG:K01613,RefSeq:WP_005547703.1,SO:0001217,UniParc:UPI0001B9F308,UniRef:UniRef100_UPI0001B9F308,UniRef:UniRef50_B4S0J5,UniRef:UniRef90_E6KVW3;ec_number=4.1.1.65 contig_18 Pyrodigal gene 172926 173570 . + . ID=GCA008085315_01147_gene;locus_tag=GCA008085315_01147;gene=fkpA contig_18 Pyrodigal CDS 172926 173570 . + 0 ID=GCA008085315_01147;Name=Peptidyl-prolyl cis-trans isomerase;locus_tag=GCA008085315_01147;product=Peptidyl-prolyl cis-trans isomerase;gene=fkpA;Parent=GCA008085315_01147_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0545,COG:O,SO:0001217,UniRef:UniRef50_A0A380TPQ2,UniRef:UniRef90_E6KVW2 contig_18 Pyrodigal gene 173634 173789 . - . ID=GCA008085315_01148_gene;locus_tag=GCA008085315_01148 contig_18 Pyrodigal CDS 173634 173789 . - 0 ID=GCA008085315_01148;Name=hypothetical protein;locus_tag=GCA008085315_01148;product=hypothetical protein;Parent=GCA008085315_01148_gene;inference=ab initio prediction:Pyrodigal:3.5 contig_18 Pyrodigal gene 173871 174371 . - . ID=GCA008085315_01149_gene;locus_tag=GCA008085315_01149 contig_18 Pyrodigal CDS 173871 174371 . - 0 ID=GCA008085315_01149;Name=hypothetical protein;locus_tag=GCA008085315_01149;product=hypothetical protein;Parent=GCA008085315_01149_gene;inference=ab initio prediction:Pyrodigal:3.5 contig_18 Pyrodigal gene 174607 175392 . + . ID=GCA008085315_01150_gene;locus_tag=GCA008085315_01150;gene=yjjP contig_18 Pyrodigal CDS 174607 175392 . + 0 ID=GCA008085315_01150;Name=Threonine/serine exporter-like N-terminal domain-containing protein;locus_tag=GCA008085315_01150;product=Threonine/serine exporter-like N-terminal domain-containing protein;gene=yjjP;Parent=GCA008085315_01150_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG2966,RefSeq:WP_005547712.1,SO:0001217,UniParc:UPI0001B9F30D,UniRef:UniRef100_UPI0001B9F30D,UniRef:UniRef50_B7LNJ8,UniRef:UniRef90_U1QZB2 contig_18 Pyrodigal gene 175394 175858 . + . ID=GCA008085315_01151_gene;locus_tag=GCA008085315_01151;gene=yjjB contig_18 Pyrodigal CDS 175394 175858 . + 0 ID=GCA008085315_01151;Name=Threonine/Serine exporter ThrE domain-containing protein;locus_tag=GCA008085315_01151;product=Threonine/Serine exporter ThrE domain-containing protein;gene=yjjB;Parent=GCA008085315_01151_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG3610,RefSeq:WP_005547714.1,SO:0001217,UniParc:UPI0001B9F30E,UniRef:UniRef100_UPI0001B9F30E,UniRef:UniRef50_B4EX78,UniRef:UniRef90_U1S4B7 contig_18 Pyrodigal gene 175898 176383 . + . ID=GCA008085315_01152_gene;locus_tag=GCA008085315_01152;gene=folA contig_18 Pyrodigal CDS 175898 176383 . + 0 ID=GCA008085315_01152;Name=type 3 dihydrofolate reductase;locus_tag=GCA008085315_01152;product=type 3 dihydrofolate reductase;Dbxref=GO:0004146,GO:0046654;gene=folA;Parent=GCA008085315_01152_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0262,COG:H,KEGG:K00287,RefSeq:WP_005547716.1,SO:0001217,UniParc:UPI0001B9F30F,UniRef:UniRef100_UPI0001B9F30F,UniRef:UniRef50_P43791,UniRef:UniRef90_E6KVV3;ec_number=1.5.1.3 contig_18 Pyrodigal gene 176503 177813 . - . ID=GCA008085315_01153_gene;locus_tag=GCA008085315_01153;gene=mpfA contig_18 Pyrodigal CDS 176503 177813 . - 0 ID=GCA008085315_01153;Name=Polyamine export protein;locus_tag=GCA008085315_01153;product=Polyamine export protein;gene=mpfA;Parent=GCA008085315_01153_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1253,COG:PT,KEGG:K03699,RefSeq:WP_005547718.1,SO:0001217,UniParc:UPI0001B9F310,UniRef:UniRef100_UPI0001B9F310,UniRef:UniRef50_P0AE45,UniRef:UniRef90_A0A336N771 contig_18 Pyrodigal gene 177904 178428 . - . ID=GCA008085315_01154_gene;locus_tag=GCA008085315_01154 contig_18 Pyrodigal CDS 177904 178428 . - 0 ID=GCA008085315_01154;Name=DUF1523 domain-containing protein;locus_tag=GCA008085315_01154;product=DUF1523 domain-containing protein;Parent=GCA008085315_01154_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005547722.1,SO:0001217,UniParc:UPI0001B9F312,UniRef:UniRef100_UPI0001B9F312,UniRef:UniRef50_P43999,UniRef:UniRef90_G4A9S1 contig_18 Pyrodigal gene 178460 179242 . - . ID=GCA008085315_01155_gene;locus_tag=GCA008085315_01155;gene=tatD contig_18 Pyrodigal CDS 178460 179242 . - 0 ID=GCA008085315_01155;Name=TatD family hydrolase;locus_tag=GCA008085315_01155;product=TatD family hydrolase;gene=tatD;Parent=GCA008085315_01155_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0084,COG:N,KEGG:K03424,RefSeq:WP_005547724.1,SO:0001217,UniParc:UPI0001B9F313,UniRef:UniRef100_UPI0001B9F313,UniRef:UniRef50_Q5E418,UniRef:UniRef90_E6KVV6;ec_number=3.1.21.- contig_18 Pyrodigal gene 179246 180229 . - . ID=GCA008085315_01156_gene;locus_tag=GCA008085315_01156;gene=holB contig_18 Pyrodigal CDS 179246 180229 . - 0 ID=GCA008085315_01156;Name=DNA polymerase III subunit delta';locus_tag=GCA008085315_01156;product=DNA polymerase III subunit delta';gene=holB;Parent=GCA008085315_01156_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0470,COG:L,RefSeq:WP_005547726.1,SO:0001217,UniParc:UPI0001B9F314,UniRef:UniRef100_UPI0001B9F314,UniRef:UniRef50_P43748,UniRef:UniRef90_A0A5D0EK95;ec_number=2.7.7.7 contig_18 Pyrodigal gene 180226 180858 . - . ID=GCA008085315_01157_gene;locus_tag=GCA008085315_01157;gene=tmk contig_18 Pyrodigal CDS 180226 180858 . - 0 ID=GCA008085315_01157;Name=dTMP kinase;locus_tag=GCA008085315_01157;product=dTMP kinase;Dbxref=GO:0004798,GO:0005524,GO:0006233;gene=tmk;Parent=GCA008085315_01157_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0125,COG:F,KEGG:K00943,RefSeq:WP_005538571.1,SO:0001217,UniParc:UPI0001CA789D,UniRef:UniRef100_A0A142G1M1,UniRef:UniRef50_O69169,UniRef:UniRef90_A0A142G1M1;ec_number=2.7.4.9 contig_18 Pyrodigal gene 180860 181903 . - . ID=GCA008085315_01158_gene;locus_tag=GCA008085315_01158;gene=mltG contig_18 Pyrodigal CDS 180860 181903 . - 0 ID=GCA008085315_01158;Name=Endolytic murein transglycosylase;locus_tag=GCA008085315_01158;product=Endolytic murein transglycosylase;gene=mltG;Parent=GCA008085315_01158_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1559,COG:M,KEGG:K07082,RefSeq:WP_005538572.1,SO:0001217,UniParc:UPI0001B9F316,UniRef:UniRef100_A0A5D0EM53,UniRef:UniRef50_P44720,UniRef:UniRef90_A0A5D0EM53;ec_number=4.2.2.29 contig_18 Pyrodigal gene 182042 182380 . - . ID=GCA008085315_01159_gene;locus_tag=GCA008085315_01159;gene=glnB contig_18 Pyrodigal CDS 182042 182380 . - 0 ID=GCA008085315_01159;Name=nitrogen regulatory protein P-II;locus_tag=GCA008085315_01159;product=nitrogen regulatory protein P-II;gene=glnB;Parent=GCA008085315_01159_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0347,COG:TE,RefSeq:WP_005538573.1,SO:0001217,UniParc:UPI0001B9F317,UniRef:UniRef100_A0A142G1L9,UniRef:UniRef50_Q53044,UniRef:UniRef90_A0A142G1L9 contig_18 Pyrodigal gene 182456 183214 . - . ID=GCA008085315_01160_gene;locus_tag=GCA008085315_01160;gene=glpR contig_18 Pyrodigal CDS 182456 183214 . - 0 ID=GCA008085315_01160;Name=DeoR family transcriptional regulator;locus_tag=GCA008085315_01160;product=DeoR family transcriptional regulator;gene=glpR;Parent=GCA008085315_01160_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1349,COG:KG,RefSeq:WP_005538577.1,SO:0001217,UniParc:UPI0001B9F318,UniRef:UniRef100_A0A142G1L8,UniRef:UniRef50_Q849X9,UniRef:UniRef90_A0A142G1L8 contig_18 Pyrodigal gene 183407 184312 . + . ID=GCA008085315_01161_gene;locus_tag=GCA008085315_01161;gene=ltnD contig_18 Pyrodigal CDS 183407 184312 . + 0 ID=GCA008085315_01161;Name=L-threonate dehydrogenase;locus_tag=GCA008085315_01161;product=L-threonate dehydrogenase;Dbxref=GO:0005975,GO:0016616;gene=ltnD;Parent=GCA008085315_01161_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2084,COG:I,RefSeq:WP_005551831.1,SO:0001217,UniParc:UPI00022AC164,UniRef:UniRef100_A0A142G1L7,UniRef:UniRef50_A0A0H2VA68,UniRef:UniRef90_A0A142G1L7;ec_number=1.1.1.411 contig_18 Pyrodigal gene 184315 185559 . + . ID=GCA008085315_01162_gene;locus_tag=GCA008085315_01162;gene=otnK contig_18 Pyrodigal CDS 184315 185559 . + 0 ID=GCA008085315_01162;Name=3-oxo-tetronate kinase;locus_tag=GCA008085315_01162;product=3-oxo-tetronate kinase;Dbxref=GO:0005524,GO:0005975,GO:0016301;gene=otnK;Parent=GCA008085315_01162_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3395,COG:G,KEGG:K21948,RefSeq:WP_012820792.1,SO:0001217,UniParc:UPI0001B9F31A,UniRef:UniRef100_UPI0001B9F31A,UniRef:UniRef50_P44093,UniRef:UniRef90_A0A142G1L6;ec_number=2.7.1.217 contig_18 Pyrodigal gene 185556 186188 . + . ID=GCA008085315_01163_gene;locus_tag=GCA008085315_01163;gene=araD contig_18 Pyrodigal CDS 185556 186188 . + 0 ID=GCA008085315_01163;Name=aldolase;locus_tag=GCA008085315_01163;product=aldolase;gene=araD;Parent=GCA008085315_01163_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0235,COG:EG,RefSeq:WP_005538584.1,SO:0001217,UniParc:UPI0001B9F31B,UniRef:UniRef100_A0A142G1L5,UniRef:UniRef50_A0A3S4UMW2,UniRef:UniRef90_A0A142G1L5;ec_number=4.1.2.- contig_18 Pyrodigal gene 186191 186967 . + . ID=GCA008085315_01164_gene;locus_tag=GCA008085315_01164;gene=otnI contig_18 Pyrodigal CDS 186191 186967 . + 0 ID=GCA008085315_01164;Name=2-oxo-tetronate isomerase;locus_tag=GCA008085315_01164;product=2-oxo-tetronate isomerase;Dbxref=GO:0005975,GO:0016853;gene=otnI;Parent=GCA008085315_01164_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3622,COG:G,RefSeq:WP_005538590.1,SO:0001217,UniParc:UPI0001CA7854,UniRef:UniRef100_A0A5D0EI11,UniRef:UniRef50_Q57151,UniRef:UniRef90_A0A5D0EI11;ec_number=5.3.1.35 contig_18 Pyrodigal gene 187056 188408 . + . ID=GCA008085315_01165_gene;locus_tag=GCA008085315_01165;gene=gntT contig_18 Pyrodigal CDS 187056 188408 . + 0 ID=GCA008085315_01165;Name=GntT protein;locus_tag=GCA008085315_01165;product=GntT protein;gene=gntT;Parent=GCA008085315_01165_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2610,COG:G,RefSeq:WP_005547737.1,SO:0001217,UniParc:UPI00022ACFD8,UniRef:UniRef100_UPI00022ACFD8,UniRef:UniRef50_Q65R26,UniRef:UniRef90_G4A9R0 contig_18 Pyrodigal gene 188433 189773 . + . ID=GCA008085315_01166_gene;locus_tag=GCA008085315_01166 contig_18 Pyrodigal CDS 188433 189773 . + 0 ID=GCA008085315_01166;Name=Phospholipase;locus_tag=GCA008085315_01166;product=Phospholipase;Parent=GCA008085315_01166_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005575784.1,SO:0001217,UniParc:UPI00022ACFD7,UniRef:UniRef100_UPI00022ACFD7,UniRef:UniRef50_Q9CL84,UniRef:UniRef90_A0A142G1L3 contig_18 Pyrodigal gene 189791 190483 . + . ID=GCA008085315_01167_gene;locus_tag=GCA008085315_01167 contig_18 Pyrodigal CDS 189791 190483 . + 0 ID=GCA008085315_01167;Name=Cyclase;locus_tag=GCA008085315_01167;product=Cyclase;Parent=GCA008085315_01167_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148320864.1,SO:0001217,UniParc:UPI0011D9D657,UniRef:UniRef100_UPI0011D9D657,UniRef:UniRef50_A0A0F5EYB3,UniRef:UniRef90_A0A5D0EIX5 contig_18 Pyrodigal gene 190531 192048 . + . ID=GCA008085315_01168_gene;locus_tag=GCA008085315_01168 contig_18 Pyrodigal CDS 190531 192048 . + 0 ID=GCA008085315_01168;Name=Alpha/beta hydrolase;locus_tag=GCA008085315_01168;product=Alpha/beta hydrolase;Parent=GCA008085315_01168_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148320866.1,SO:0001217,UniParc:UPI0011D39F68,UniRef:UniRef100_UPI0011D39F68,UniRef:UniRef50_G9ZHJ4,UniRef:UniRef90_A0A5D0EK87 contig_18 Pyrodigal gene 192244 193062 . + . ID=GCA008085315_01169_gene;locus_tag=GCA008085315_01169;gene=cof contig_18 Pyrodigal CDS 192244 193062 . + 0 ID=GCA008085315_01169;Name=pyridoxal phosphatase;locus_tag=GCA008085315_01169;product=pyridoxal phosphatase;Dbxref=GO:0016787;gene=cof;Parent=GCA008085315_01169_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0561,COG:HR,KEGG:K21064,RefSeq:WP_005547747.1,SO:0001217,UniParc:UPI0001B9F321,UniRef:UniRef100_UPI0001B9F321,UniRef:UniRef50_Q9CLI7,UniRef:UniRef90_A0A5D0EJY9;ec_number=3.1.3.74 contig_18 Pyrodigal gene 193268 195868 . - . ID=GCA008085315_01170_gene;locus_tag=GCA008085315_01170;gene=mutS contig_18 Pyrodigal CDS 193268 195868 . - 0 ID=GCA008085315_01170;Name=DNA mismatch repair protein MutS;locus_tag=GCA008085315_01170;product=DNA mismatch repair protein MutS;Dbxref=GO:0005524,GO:0006298,GO:0030983;gene=mutS;Parent=GCA008085315_01170_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0249,COG:L,RefSeq:WP_005588806.1,SO:0001217,UniParc:UPI0002AC56A9,UniRef:UniRef100_UPI0002AC56A9,UniRef:UniRef50_Q6FC54,UniRef:UniRef90_A0AAP7GY03 contig_18 Pyrodigal gene 195953 196999 . - . ID=GCA008085315_01171_gene;locus_tag=GCA008085315_01171 contig_18 Pyrodigal CDS 195953 196999 . - 0 ID=GCA008085315_01171;Name=DUF4123 domain-containing protein;locus_tag=GCA008085315_01171;product=DUF4123 domain-containing protein;Parent=GCA008085315_01171_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_UPI00215B016D,UniRef:UniRef90_UPI00215B016D contig_18 Pyrodigal gene 197186 197944 . - . ID=GCA008085315_01172_gene;locus_tag=GCA008085315_01172 contig_18 Pyrodigal CDS 197186 197944 . - 0 ID=GCA008085315_01172;Name=Ribosomal RNA small subunit methyltransferase J;locus_tag=GCA008085315_01172;product=Ribosomal RNA small subunit methyltransferase J;Parent=GCA008085315_01172_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K15984,RefSeq:WP_005547753.1,SO:0001217,UniParc:UPI0001B9F324,UniRef:UniRef100_UPI0001B9F324,UniRef:UniRef50_P44901,UniRef:UniRef90_E6L081;ec_number=2.1.1.242 contig_18 Pyrodigal gene 197946 199043 . - . ID=GCA008085315_01173_gene;locus_tag=GCA008085315_01173;gene=trmA contig_18 Pyrodigal CDS 197946 199043 . - 0 ID=GCA008085315_01173;Name=tRNA (uridine(54)-C5)-methyltransferase TrmA;locus_tag=GCA008085315_01173;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;Dbxref=GO:0006396,GO:0030697;gene=trmA;Parent=GCA008085315_01173_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2265,COG:J,KEGG:K00557,RefSeq:WP_005575773.1,SO:0001217,UniParc:UPI0001B9F390,UniRef:UniRef100_UPI0001B9F390,UniRef:UniRef50_A0A081NK93,UniRef:UniRef90_G4A9Q1;ec_number=2.1.1.35 contig_18 Pyrodigal gene 199113 199442 . - . ID=GCA008085315_01174_gene;locus_tag=GCA008085315_01174;gene=yifE contig_18 Pyrodigal CDS 199113 199442 . - 0 ID=GCA008085315_01174;Name=DUF413 domain-containing protein;locus_tag=GCA008085315_01174;product=DUF413 domain-containing protein;gene=yifE;Parent=GCA008085315_01174_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3085,COG:S,KEGG:K09897,RefSeq:WP_005538181.1,SO:0001217,UniParc:UPI0001B9F391,UniRef:UniRef100_A0A142G1K0,UniRef:UniRef50_P0ADN2,UniRef:UniRef90_U1SBH0 contig_18 Pyrodigal gene 199502 200119 . - . ID=GCA008085315_01175_gene;locus_tag=GCA008085315_01175;gene=dsbA contig_18 Pyrodigal CDS 199502 200119 . - 0 ID=GCA008085315_01175;Name=thiol:disulfide interchange protein DsbA;locus_tag=GCA008085315_01175;product=thiol:disulfide interchange protein DsbA;Dbxref=GO:0015036;gene=dsbA;Parent=GCA008085315_01175_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1651,COG:O,KEGG:K03673,RefSeq:WP_005547757.1,SO:0001217,UniParc:UPI0001B9F392,UniRef:UniRef100_UPI0001B9F392,UniRef:UniRef50_P31810,UniRef:UniRef90_A0A5D0EI30;ec_number=1.8.4.15 contig_18 Pyrodigal gene 200138 200404 . - . ID=GCA008085315_01176_gene;locus_tag=GCA008085315_01176;gene=yihD contig_18 Pyrodigal CDS 200138 200404 . - 0 ID=GCA008085315_01176;Name=Toxin-antitoxin system%2C antitoxin component%2C ribbon-helix-helix domain protein;locus_tag=GCA008085315_01176;product=Toxin-antitoxin system%2C antitoxin component%2C ribbon-helix-helix domain protein;gene=yihD;Parent=GCA008085315_01176_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3084,COG:S,KEGG:K09896,RefSeq:WP_005547759.1,SO:0001217,UniParc:UPI0001B9F393,UniRef:UniRef100_UPI0001B9F393,UniRef:UniRef50_P0ADP9,UniRef:UniRef90_U1QP00 contig_18 Pyrodigal gene 200488 201072 . + . ID=GCA008085315_01177_gene;locus_tag=GCA008085315_01177;gene=mobA contig_18 Pyrodigal CDS 200488 201072 . + 0 ID=GCA008085315_01177;Name=molybdenum cofactor guanylyltransferase MobA;locus_tag=GCA008085315_01177;product=molybdenum cofactor guanylyltransferase MobA;Dbxref=GO:0003824,GO:0006777;gene=mobA;Parent=GCA008085315_01177_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0746,COG:H,RefSeq:WP_005547761.1,SO:0001217,UniParc:UPI0001B9F394,UniRef:UniRef100_UPI0001B9F394,UniRef:UniRef50_P44899,UniRef:UniRef90_A0A5D0EM45;ec_number=2.7.7.77 contig_18 Pyrodigal gene 201171 201701 . + . ID=GCA008085315_01178_gene;locus_tag=GCA008085315_01178 contig_18 Pyrodigal CDS 201171 201701 . + 0 ID=GCA008085315_01178;Name=Lipoprotein;locus_tag=GCA008085315_01178;product=Lipoprotein;Parent=GCA008085315_01178_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005547763.1,SO:0001217,UniParc:UPI0001B9F395,UniRef:UniRef100_UPI0001B9F395,UniRef:UniRef50_P43997,UniRef:UniRef90_A0A5D0EJQ8 contig_18 Pyrodigal gene 201813 203342 . + . ID=GCA008085315_01179_gene;locus_tag=GCA008085315_01179;gene=fruB contig_18 Pyrodigal CDS 201813 203342 . + 0 ID=GCA008085315_01179;Name=fused PTS fructose transporter subunit IIA/HPr protein;locus_tag=GCA008085315_01179;product=fused PTS fructose transporter subunit IIA/HPr protein;gene=fruB;Parent=GCA008085315_01179_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4668,COG:G,RefSeq:WP_148320868.1,SO:0001217,UniParc:UPI0011DC3C6E,UniRef:UniRef100_UPI0011DC3C6E,UniRef:UniRef50_K0G4R5,UniRef:UniRef90_A0A5D0EK21 contig_18 Pyrodigal gene 203345 204286 . + . ID=GCA008085315_01180_gene;locus_tag=GCA008085315_01180;gene=fruK contig_18 Pyrodigal CDS 203345 204286 . + 0 ID=GCA008085315_01180;Name=1-phosphofructokinase;locus_tag=GCA008085315_01180;product=1-phosphofructokinase;Dbxref=GO:0008662,GO:0016773;gene=fruK;Parent=GCA008085315_01180_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1105,COG:G,KEGG:K00882,RefSeq:WP_005547767.1,SO:0001217,UniParc:UPI0001B9F397,UniRef:UniRef100_UPI0001B9F397,UniRef:UniRef50_P44330,UniRef:UniRef90_A0A5D0EIQ9;ec_number=2.7.1.56 contig_18 Pyrodigal gene 204291 205955 . + . ID=GCA008085315_01181_gene;locus_tag=GCA008085315_01181;gene=fruA contig_18 Pyrodigal CDS 204291 205955 . + 0 ID=GCA008085315_01181;Name=protein-N(pi)-phosphohistidine--D-fructose phosphotransferase;locus_tag=GCA008085315_01181;product=protein-N(pi)-phosphohistidine--D-fructose phosphotransferase;gene=fruA;Parent=GCA008085315_01181_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3925,COG:GT,RefSeq:WP_148320872.1,SO:0001217,UniParc:UPI0011D38AFC,UniRef:UniRef100_UPI0011D38AFC,UniRef:UniRef50_A0A2P5GJG2,UniRef:UniRef90_A0A5D0EHM2 contig_18 Pyrodigal gene 206019 206255 . + . ID=GCA008085315_01182_gene;locus_tag=GCA008085315_01182;gene=recA contig_18 Pyrodigal CDS 206019 206255 . + 0 ID=GCA008085315_01182;Name=Recombinase RecA;locus_tag=GCA008085315_01182;product=Recombinase RecA;gene=recA;Parent=GCA008085315_01182_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005547771.1,SO:0001217,UniParc:UPI00022AC91B,UniRef:UniRef100_UPI00215A4DD6,UniRef:UniRef50_E6L071,UniRef:UniRef90_G4A9P2 contig_18 Pyrodigal gene 206987 207538 . + . ID=GCA008085315_01183_gene;locus_tag=GCA008085315_01183;gene=mdaB contig_18 Pyrodigal CDS 206987 207538 . + 0 ID=GCA008085315_01183;Name=NAD(P)H-dependent oxidoreductase;locus_tag=GCA008085315_01183;product=NAD(P)H-dependent oxidoreductase;gene=mdaB;Parent=GCA008085315_01183_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2249,COG:R,RefSeq:WP_005547777.1,SO:0001217,UniParc:UPI0001B9F39D,UniRef:UniRef100_UPI0001B9F39D,UniRef:UniRef50_F9D686,UniRef:UniRef90_UPI001E4DABD6 contig_18 Pyrodigal gene 207620 207958 . + . ID=GCA008085315_01184_gene;locus_tag=GCA008085315_01184;gene=yciI contig_18 Pyrodigal CDS 207620 207958 . + 0 ID=GCA008085315_01184;Name=YCII-related protein;locus_tag=GCA008085315_01184;product=YCII-related protein;gene=yciI;Parent=GCA008085315_01184_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2350,COG:QR,RefSeq:WP_005566508.1,SO:0001217,UniParc:UPI00022ACBF6,UniRef:UniRef100_UPI00022ACBF6,UniRef:UniRef50_G4A9N9,UniRef:UniRef90_G4A9N9 contig_18 Pyrodigal gene 208106 208810 . + . ID=GCA008085315_01185_gene;locus_tag=GCA008085315_01185;gene=ygiN contig_18 Pyrodigal CDS 208106 208810 . + 0 ID=GCA008085315_01185;Name=Antibiotic biosynthesis monooxygenase;locus_tag=GCA008085315_01185;product=Antibiotic biosynthesis monooxygenase;gene=ygiN;Parent=GCA008085315_01185_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1359,RefSeq:WP_148320874.1,SO:0001217,UniParc:UPI0011D8C72E,UniRef:UniRef100_UPI0011D8C72E,UniRef:UniRef50_A0A0A3A448,UniRef:UniRef90_A0A5D0EM68 contig_18 Pyrodigal gene 209252 209662 . + . ID=GCA008085315_01186_gene;locus_tag=GCA008085315_01186;gene=secE contig_18 Pyrodigal CDS 209252 209662 . + 0 ID=GCA008085315_01186;Name=preprotein translocase subunit SecE;locus_tag=GCA008085315_01186;product=preprotein translocase subunit SecE;gene=secE;Parent=GCA008085315_01186_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0690,COG:U,RefSeq:WP_005547784.1,SO:0001217,UniParc:UPI0001B9F3A0,UniRef:UniRef100_UPI0001B9F3A0,UniRef:UniRef50_A6VKD2,UniRef:UniRef90_A0A142G115 contig_18 Pyrodigal gene 209664 210215 . + . ID=GCA008085315_01187_gene;locus_tag=GCA008085315_01187;gene=nusG contig_18 Pyrodigal CDS 209664 210215 . + 0 ID=GCA008085315_01187;Name=transcription termination/antitermination protein NusG;locus_tag=GCA008085315_01187;product=transcription termination/antitermination protein NusG;Dbxref=GO:0032784;gene=nusG;Parent=GCA008085315_01187_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0250,COG:K,RefSeq:WP_005547787.1,SO:0001217,UniParc:UPI0001B9F3A1,UniRef:UniRef100_A0A142G114,UniRef:UniRef50_Q9KV35,UniRef:UniRef90_E6L065 contig_18 Pyrodigal gene 210371 210799 . + . ID=GCA008085315_01188_gene;locus_tag=GCA008085315_01188;gene=rplK contig_18 Pyrodigal CDS 210371 210799 . + 0 ID=GCA008085315_01188;Name=50S ribosomal protein L11;locus_tag=GCA008085315_01188;product=50S ribosomal protein L11;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0022625,GO:0070180;gene=rplK;Parent=GCA008085315_01188_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0080,COG:J,KEGG:K02867,RefSeq:WP_005542594.1,SO:0001217,UniParc:UPI0001B9F3A2,UniRef:UniRef100_A0A377I124,UniRef:UniRef50_P62441,UniRef:UniRef90_P44351 contig_18 Pyrodigal gene 210804 211493 . + . ID=GCA008085315_01189_gene;locus_tag=GCA008085315_01189;gene=rplA contig_18 Pyrodigal CDS 210804 211493 . + 0 ID=GCA008085315_01189;Name=50S ribosomal protein L1;locus_tag=GCA008085315_01189;product=50S ribosomal protein L1;Dbxref=GO:0000049,GO:0003723,GO:0003735,GO:0006412,GO:0006417,GO:0015934,GO:0019843,GO:0022625;gene=rplA;Parent=GCA008085315_01189_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0081,COG:J,KEGG:K02863,RefSeq:WP_148333969.1,SO:0001217,UniParc:UPI0011DBCCD9,UniRef:UniRef100_UPI0011DBCCD9,UniRef:UniRef50_P10054,UniRef:UniRef90_O32614 contig_18 Pyrodigal gene 211855 212346 . + . ID=GCA008085315_01190_gene;locus_tag=GCA008085315_01190;gene=rplJ contig_18 Pyrodigal CDS 211855 212346 . + 0 ID=GCA008085315_01190;Name=50S ribosomal protein L10;locus_tag=GCA008085315_01190;product=50S ribosomal protein L10;Dbxref=GO:0003735,GO:0006412,GO:0015934,GO:0022625,GO:0070180;gene=rplJ;Parent=GCA008085315_01190_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0244,COG:J,KEGG:K02864,RefSeq:WP_005542581.1,SO:0001217,UniParc:UPI0001B9F3A5,UniRef:UniRef100_A0A142G111,UniRef:UniRef50_P44350,UniRef:UniRef90_P44350 contig_18 Pyrodigal gene 212398 212769 . + . ID=GCA008085315_01191_gene;locus_tag=GCA008085315_01191;gene=rplL contig_18 Pyrodigal CDS 212398 212769 . + 0 ID=GCA008085315_01191;Name=50S ribosomal protein L7/L12;locus_tag=GCA008085315_01191;product=50S ribosomal protein L7/L12;Dbxref=GO:0003729,GO:0003735,GO:0005840,GO:0006412,GO:0022625;gene=rplL;Parent=GCA008085315_01191_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0222,COG:J,RefSeq:WP_005542578.1,SO:0001217,UniParc:UPI0001B9F3A6,UniRef:UniRef100_A0A142G110,UniRef:UniRef50_Q8ETZ0,UniRef:UniRef90_P44348 contig_18 Pyrodigal gene 213040 217068 . + . ID=GCA008085315_01192_gene;locus_tag=GCA008085315_01192;gene=rpoB contig_18 Pyrodigal CDS 213040 217068 . + 0 ID=GCA008085315_01192;Name=DNA-directed RNA polymerase subunit beta;locus_tag=GCA008085315_01192;product=DNA-directed RNA polymerase subunit beta;Dbxref=GO:0000428,GO:0001054,GO:0001055,GO:0001056,GO:0001057,GO:0001058,GO:0001066,GO:0003677,GO:0003899,GO:0006351,GO:0032549;gene=rpoB;Parent=GCA008085315_01192_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0085,COG:K,KEGG:K03043,RefSeq:WP_005547790.1,SO:0001217,UniParc:UPI0001B9F3A7,UniRef:UniRef100_UPI0001B9F3A7,UniRef:UniRef50_Q9CK91,UniRef:UniRef90_A6VKC5;ec_number=2.7.7.6 contig_18 Pyrodigal gene 217173 221441 . + . ID=GCA008085315_01193_gene;locus_tag=GCA008085315_01193;gene=rpoC contig_18 Pyrodigal CDS 217173 221441 . + 0 ID=GCA008085315_01193;Name=DNA-directed RNA polymerase subunit beta';locus_tag=GCA008085315_01193;product=DNA-directed RNA polymerase subunit beta';Dbxref=GO:0000287,GO:0000428,GO:0001054,GO:0001055,GO:0001056,GO:0001057,GO:0001058,GO:0001066,GO:0003677,GO:0003899,GO:0006351,GO:0008270;gene=rpoC;Parent=GCA008085315_01193_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0086,COG:K,RefSeq:WP_148320878.1,SO:0001217,UniParc:UPI0011D36FE3,UniRef:UniRef100_UPI0011D36FE3,UniRef:UniRef50_Q65W40,UniRef:UniRef90_Q65W40;ec_number=2.7.7.6 ##sequence-region contig_19 1 213997 contig_19 Bakta region 1 213997 . + . ID=contig_19;Name=contig_19 contig_19 tRNAscan-SE gene 95 170 . - . ID=GCA008085315_01194_gene;locus_tag=GCA008085315_01194;gene=trnT contig_19 tRNAscan-SE tRNA 95 170 . - . ID=GCA008085315_01194;Name=tRNA-Thr(ggt);locus_tag=GCA008085315_01194;product=tRNA-Thr(ggt);gene=trnT;anti_codon=ggt;amino_acid=Thr;Parent=GCA008085315_01194_gene;inference=profile:tRNAscan:2.0;Note=SO:0000270 contig_19 tRNAscan-SE gene 174 248 . - . ID=GCA008085315_01195_gene;locus_tag=GCA008085315_01195;gene=trnG contig_19 tRNAscan-SE tRNA 174 248 . - . ID=GCA008085315_01195;Name=tRNA-Gly(tcc);locus_tag=GCA008085315_01195;product=tRNA-Gly(tcc);gene=trnG;anti_codon=tcc;amino_acid=Gly;Parent=GCA008085315_01195_gene;inference=profile:tRNAscan:2.0;Note=SO:0000260 contig_19 tRNAscan-SE gene 289 373 . - . ID=GCA008085315_01196_gene;locus_tag=GCA008085315_01196;gene=trnY contig_19 tRNAscan-SE tRNA 289 373 . - . ID=GCA008085315_01196;Name=tRNA-Tyr(gta);locus_tag=GCA008085315_01196;product=tRNA-Tyr(gta);gene=trnY;anti_codon=gta;amino_acid=Tyr;Parent=GCA008085315_01196_gene;inference=profile:tRNAscan:2.0;Note=SO:0000272 contig_19 tRNAscan-SE gene 404 479 . - . ID=GCA008085315_01197_gene;locus_tag=GCA008085315_01197;gene=trnT contig_19 tRNAscan-SE tRNA 404 479 . - . ID=GCA008085315_01197;Name=tRNA-Thr(tgt);locus_tag=GCA008085315_01197;product=tRNA-Thr(tgt);gene=trnT;anti_codon=tgt;amino_acid=Thr;Parent=GCA008085315_01197_gene;inference=profile:tRNAscan:2.0;Note=SO:0000270 contig_19 Pyrodigal gene 735 1649 . + . ID=GCA008085315_01198_gene;locus_tag=GCA008085315_01198;gene=coaA contig_19 Pyrodigal CDS 735 1649 . + 0 ID=GCA008085315_01198;Name=type I pantothenate kinase;locus_tag=GCA008085315_01198;product=type I pantothenate kinase;Dbxref=GO:0004594,GO:0015937;gene=coaA;Parent=GCA008085315_01198_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1072,COG:H,KEGG:K00867,RefSeq:WP_005546885.1,SO:0001217,UniParc:UPI0001B9F342,UniRef:UniRef100_UPI0001B9F342,UniRef:UniRef50_P44793,UniRef:UniRef90_A0A5D0EI56;ec_number=2.7.1.33 contig_19 Pyrodigal gene 1704 4124 . - . ID=GCA008085315_01199_gene;locus_tag=GCA008085315_01199;gene=gyrB contig_19 Pyrodigal CDS 1704 4124 . - 0 ID=GCA008085315_01199;Name=DNA topoisomerase (ATP-hydrolyzing) subunit B;locus_tag=GCA008085315_01199;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;Dbxref=GO:0003677,GO:0003918,GO:0005524,GO:0005694,GO:0006265;gene=gyrB;Parent=GCA008085315_01199_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0187,COG:L,KEGG:K02470,RefSeq:WP_005546883.1,SO:0001217,UniParc:UPI0001B9F343,UniRef:UniRef100_UPI0001B9F343,UniRef:UniRef50_P13364,UniRef:UniRef90_E6L0F7;ec_number=5.6.2.2 contig_19 Pyrodigal gene 4221 6110 . - . ID=GCA008085315_01200_gene;locus_tag=GCA008085315_01200;gene=recQ contig_19 Pyrodigal CDS 4221 6110 . - 0 ID=GCA008085315_01200;Name=DNA helicase RecQ;locus_tag=GCA008085315_01200;product=DNA helicase RecQ;Dbxref=GO:0003678,GO:0006310,GO:0009432;gene=recQ;Parent=GCA008085315_01200_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0514,COG:L,RefSeq:WP_005566895.1,SO:0001217,UniParc:UPI0001B9F344,UniRef:UniRef100_UPI0001B9F344,UniRef:UniRef50_P15043,UniRef:UniRef90_E6L0F8;ec_number=5.6.2.4 contig_19 Pyrodigal gene 6107 6421 . - . ID=GCA008085315_01201_gene;locus_tag=GCA008085315_01201;gene=cyaY contig_19 Pyrodigal CDS 6107 6421 . - 0 ID=GCA008085315_01201;Name=iron donor protein CyaY;locus_tag=GCA008085315_01201;product=iron donor protein CyaY;Dbxref=GO:0005506,GO:0016226;gene=cyaY;Parent=GCA008085315_01201_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1965,COG:P,RefSeq:WP_005540693.1,SO:0001217,UniParc:UPI0001B9F345,UniRef:UniRef100_A0A5D0KZL8,UniRef:UniRef50_P71358,UniRef:UniRef90_A0A5D0KZL8 contig_19 Pyrodigal gene 6544 6663 . + . ID=GCA008085315_01202_gene;locus_tag=GCA008085315_01202;gene=lptM contig_19 Pyrodigal CDS 6544 6663 . + 0 ID=GCA008085315_01202;Name=LPS translocon maturation chaperone LptM;locus_tag=GCA008085315_01202;product=LPS translocon maturation chaperone LptM;gene=lptM;Parent=GCA008085315_01202_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005540691.1,SO:0001217,UniParc:UPI0001B9F346,UniRef:UniRef100_A0A5D0DZC7,UniRef:UniRef50_G4A9D7,UniRef:UniRef90_G4A9D7 contig_19 Pyrodigal gene 6681 7931 . + . ID=GCA008085315_01203_gene;locus_tag=GCA008085315_01203;gene=lysA contig_19 Pyrodigal CDS 6681 7931 . + 0 ID=GCA008085315_01203;Name=diaminopimelate decarboxylase;locus_tag=GCA008085315_01203;product=diaminopimelate decarboxylase;Dbxref=GO:0008836,GO:0009089;gene=lysA;Parent=GCA008085315_01203_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0019,COG:E,KEGG:K01586,RefSeq:WP_005546877.1,SO:0001217,UniParc:UPI0001B9F3B2,UniRef:UniRef100_UPI0001B9F3B2,UniRef:UniRef50_A0A0F5EYA9,UniRef:UniRef90_E6L0G1;ec_number=4.1.1.20 contig_19 Pyrodigal gene 7984 8589 . - . ID=GCA008085315_01204_gene;locus_tag=GCA008085315_01204;gene=yagU contig_19 Pyrodigal CDS 7984 8589 . - 0 ID=GCA008085315_01204;Name=DUF1440 domain-containing protein;locus_tag=GCA008085315_01204;product=DUF1440 domain-containing protein;gene=yagU;Parent=GCA008085315_01204_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3477,COG:S,KEGG:K08996,RefSeq:WP_005546875.1,SO:0001217,UniParc:UPI0001B9F3B3,UniRef:UniRef100_UPI0001B9F3B3,UniRef:UniRef50_P0AAA1,UniRef:UniRef90_A0A142FZK2 contig_19 Pyrodigal gene 8788 9348 . + . ID=GCA008085315_01205_gene;locus_tag=GCA008085315_01205;gene=tag contig_19 Pyrodigal CDS 8788 9348 . + 0 ID=GCA008085315_01205;Name=DNA-3-methyladenine glycosidase;locus_tag=GCA008085315_01205;product=DNA-3-methyladenine glycosidase;gene=tag;Parent=GCA008085315_01205_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2818,COG:L,KEGG:K01246,RefSeq:WP_005546873.1,SO:0001217,UniParc:UPI0001B9F3B4,UniRef:UniRef100_UPI0001B9F3B4,UniRef:UniRef50_A0A085G4J9,UniRef:UniRef90_A0A5D0EK83;ec_number=3.2.2.20 contig_19 Pyrodigal gene 9414 11756 . + . ID=GCA008085315_01206_gene;locus_tag=GCA008085315_01206;gene=lptD contig_19 Pyrodigal CDS 9414 11756 . + 0 ID=GCA008085315_01206;Name=LPS assembly protein LptD;locus_tag=GCA008085315_01206;product=LPS assembly protein LptD;Dbxref=GO:0015920,GO:0019867,GO:0043165;gene=lptD;Parent=GCA008085315_01206_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1452,COG:M,RefSeq:WP_222859764.1,SO:0001217,UniParc:UPI001CA33AE0,UniRef:UniRef100_UPI001CA33AE0,UniRef:UniRef50_Q9CKL2,UniRef:UniRef90_A0AAC8XYB6 contig_19 Pyrodigal gene 11847 12311 . - . ID=GCA008085315_01207_gene;locus_tag=GCA008085315_01207;gene=gpt contig_19 Pyrodigal CDS 11847 12311 . - 0 ID=GCA008085315_01207;Name=xanthine phosphoribosyltransferase;locus_tag=GCA008085315_01207;product=xanthine phosphoribosyltransferase;Dbxref=GO:0000310,GO:0009116;gene=gpt;Parent=GCA008085315_01207_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0503,COG:F,KEGG:K00769,RefSeq:WP_005546869.1,SO:0001217,UniParc:UPI0001B9F3B7,UniRef:UniRef100_UPI0001B9F3B7,UniRef:UniRef50_P0A9M5,UniRef:UniRef90_E6L0C7;ec_number=2.4.2.22 contig_19 Pyrodigal gene 12426 13886 . + . ID=GCA008085315_01208_gene;locus_tag=GCA008085315_01208;gene=pepD2 contig_19 Pyrodigal CDS 12426 13886 . + 0 ID=GCA008085315_01208;Name=Aminoacyl-histidine dipeptidase;locus_tag=GCA008085315_01208;product=Aminoacyl-histidine dipeptidase;gene=pepD2;Parent=GCA008085315_01208_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2195,COG:E,KEGG:K01270,RefSeq:WP_005546866.1,SO:0001217,UniParc:UPI0001B9F3B8,UniRef:UniRef100_UPI0001B9F3B8,UniRef:UniRef50_P15288,UniRef:UniRef90_A0A5D0EI69;ec_number=3.4.13.- contig_19 Pyrodigal gene 13966 14721 . - . ID=GCA008085315_01209_gene;locus_tag=GCA008085315_01209;gene=yqjQ contig_19 Pyrodigal CDS 13966 14721 . - 0 ID=GCA008085315_01209;Name=SDR family NAD(P)-dependent oxidoreductase;locus_tag=GCA008085315_01209;product=SDR family NAD(P)-dependent oxidoreductase;gene=yqjQ;Parent=GCA008085315_01209_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0300,COG:R,RefSeq:WP_005546863.1,SO:0001217,UniParc:UPI0001B9F3B9,UniRef:UniRef100_UPI0001B9F3B9,UniRef:UniRef50_A0A380L1L8,UniRef:UniRef90_A0A5D0F1Y6 contig_19 Pyrodigal gene 14815 15327 . - . ID=GCA008085315_01210_gene;locus_tag=GCA008085315_01210;gene=mobB contig_19 Pyrodigal CDS 14815 15327 . - 0 ID=GCA008085315_01210;Name=molybdopterin-guanine dinucleotide biosynthesis protein MobB;locus_tag=GCA008085315_01210;product=molybdopterin-guanine dinucleotide biosynthesis protein MobB;Dbxref=GO:0005525,GO:0006777;gene=mobB;Parent=GCA008085315_01210_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1763,COG:H,RefSeq:WP_005546861.1,SO:0001217,UniParc:UPI0001B9F3BA,UniRef:UniRef100_UPI0001B9F3BA,UniRef:UniRef50_P44902,UniRef:UniRef90_A0A5D0EHL7 contig_19 Pyrodigal gene 15408 15845 . - . ID=GCA008085315_01211_gene;locus_tag=GCA008085315_01211;gene=rseC contig_19 Pyrodigal CDS 15408 15845 . - 0 ID=GCA008085315_01211;Name=SoxR reducing system RseC family protein;locus_tag=GCA008085315_01211;product=SoxR reducing system RseC family protein;gene=rseC;Parent=GCA008085315_01211_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3086,COG:T,KEGG:K03803,RefSeq:WP_005546859.1,SO:0001217,UniParc:UPI0001B9F3BB,UniRef:UniRef100_UPI0001B9F3BB,UniRef:UniRef50_A0A5D0EHS6,UniRef:UniRef90_A0A5D0EHS6 contig_19 Pyrodigal gene 15855 16811 . - . ID=GCA008085315_01212_gene;locus_tag=GCA008085315_01212;gene=rseB contig_19 Pyrodigal CDS 15855 16811 . - 0 ID=GCA008085315_01212;Name=sigma-E factor regulatory protein RseB;locus_tag=GCA008085315_01212;product=sigma-E factor regulatory protein RseB;gene=rseB;Parent=GCA008085315_01212_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3026,COG:T,KEGG:K03598,RefSeq:WP_005546857.1,SO:0001217,UniParc:UPI0001B9F3BC,UniRef:UniRef100_UPI0001B9F3BC,UniRef:UniRef50_P44792,UniRef:UniRef90_A0A5D0EIL1 contig_19 Pyrodigal gene 16894 17478 . - . ID=GCA008085315_01213_gene;locus_tag=GCA008085315_01213;gene=rseA contig_19 Pyrodigal CDS 16894 17478 . - 0 ID=GCA008085315_01213;Name=Anti-sigma-E factor RseA;locus_tag=GCA008085315_01213;product=Anti-sigma-E factor RseA;gene=rseA;Parent=GCA008085315_01213_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3073,COG:T,KEGG:K03597,RefSeq:WP_005546855.1,SO:0001217,UniParc:UPI0001B9F3BD,UniRef:UniRef100_UPI0001B9F3BD,UniRef:UniRef50_P44791,UniRef:UniRef90_A0A5D0EIR8 contig_19 Pyrodigal gene 17517 18092 . - . ID=GCA008085315_01214_gene;locus_tag=GCA008085315_01214;gene=rpoE contig_19 Pyrodigal CDS 17517 18092 . - 0 ID=GCA008085315_01214;Name=RNA polymerase sigma factor RpoE;locus_tag=GCA008085315_01214;product=RNA polymerase sigma factor RpoE;Dbxref=GO:0003677,GO:0003700,GO:0006352,GO:0006355,GO:0016987;gene=rpoE;Parent=GCA008085315_01214_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1595,COG:K,RefSeq:WP_005543553.1,SO:0001217,UniParc:UPI0001B9F3BE,UniRef:UniRef100_A0A142FZL2,UniRef:UniRef50_P44790,UniRef:UniRef90_E6L0D6 contig_19 Pyrodigal gene 18225 18479 . - . ID=GCA008085315_01215_gene;locus_tag=GCA008085315_01215;gene=sdhE contig_19 Pyrodigal CDS 18225 18479 . - 0 ID=GCA008085315_01215;Name=FAD assembly factor SdhE;locus_tag=GCA008085315_01215;product=FAD assembly factor SdhE;gene=sdhE;Parent=GCA008085315_01215_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2938,COG:O,RefSeq:WP_005546853.1,SO:0001217,UniParc:UPI0001B9F3BF,UniRef:UniRef100_UPI0001B9F3BF,UniRef:UniRef50_Q9CK44,UniRef:UniRef90_A0A5D0EKD8 contig_19 Pyrodigal gene 18792 20507 . - . ID=GCA008085315_01216_gene;locus_tag=GCA008085315_01216;gene=proS contig_19 Pyrodigal CDS 18792 20507 . - 0 ID=GCA008085315_01216;Name=proline--tRNA ligase;locus_tag=GCA008085315_01216;product=proline--tRNA ligase;Dbxref=GO:0004827,GO:0006433;gene=proS;Parent=GCA008085315_01216_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0442,COG:J,KEGG:K01881,RefSeq:WP_005546849.1,SO:0001217,UniParc:UPI0001B9F3C1,UniRef:UniRef100_UPI0001B9F3C1,UniRef:UniRef50_Q87Y24,UniRef:UniRef90_E6L0D3;ec_number=6.1.1.15 contig_19 Pyrodigal gene 20651 22045 . + . ID=GCA008085315_01217_gene;locus_tag=GCA008085315_01217;gene=selA contig_19 Pyrodigal CDS 20651 22045 . + 0 ID=GCA008085315_01217;Name=L-seryl-tRNA(Sec) selenium transferase;locus_tag=GCA008085315_01217;product=L-seryl-tRNA(Sec) selenium transferase;Dbxref=GO:0001514,GO:0004125,GO:0005737;gene=selA;Parent=GCA008085315_01217_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1921,COG:J,KEGG:K01042,RefSeq:WP_148320887.1,SO:0001217,UniParc:UPI0011D80556,UniRef:UniRef100_UPI0011D80556,UniRef:UniRef50_P0A821,UniRef:UniRef90_U1QGW4;ec_number=2.9.1.1 contig_19 Pyrodigal gene 22042 23901 . + . ID=GCA008085315_01218_gene;locus_tag=GCA008085315_01218;gene=selB contig_19 Pyrodigal CDS 22042 23901 . + 0 ID=GCA008085315_01218;Name=selenocysteine-specific translation elongation factor;locus_tag=GCA008085315_01218;product=selenocysteine-specific translation elongation factor;Dbxref=GO:0001514,GO:0003723,GO:0003746,GO:0003924,GO:0005525,GO:0005737;gene=selB;Parent=GCA008085315_01218_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3276,COG:J,RefSeq:WP_148320888.1,SO:0001217,UniParc:UPI0011D69C42,UniRef:UniRef100_UPI0011D69C42,UniRef:UniRef50_P43927,UniRef:UniRef90_A0A5D0EI94 contig_19 Pyrodigal gene 23947 24849 . + . ID=GCA008085315_01219_gene;locus_tag=GCA008085315_01219 contig_19 Pyrodigal CDS 23947 24849 . + 0 ID=GCA008085315_01219;Name=DUF3298 DUF4163 domains-containing protein;locus_tag=GCA008085315_01219;product=DUF3298 DUF4163 domains-containing protein;Parent=GCA008085315_01219_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005546843.1,SO:0001217,UniParc:UPI0001B9F3C4,UniRef:UniRef100_UPI0001B9F3C4,UniRef:UniRef50_A0AAP7L2U6,UniRef:UniRef90_A0A5D0EHM5 contig_19 Pyrodigal gene 24888 25184 . - . ID=GCA008085315_01220_gene;locus_tag=GCA008085315_01220 contig_19 Pyrodigal CDS 24888 25184 . - 0 ID=GCA008085315_01220;Name=hypothetical protein;locus_tag=GCA008085315_01220;product=hypothetical protein;Parent=GCA008085315_01220_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_UPI001F47D34A,UniRef:UniRef90_UPI001F47D34A contig_19 Pyrodigal gene 25340 25615 . - . ID=GCA008085315_01221_gene;locus_tag=GCA008085315_01221 contig_19 Pyrodigal CDS 25340 25615 . - 0 ID=GCA008085315_01221;Name=Pseudouridine synthase;locus_tag=GCA008085315_01221;product=Pseudouridine synthase;Parent=GCA008085315_01221_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A142G171,UniRef:UniRef90_A0A142G171 contig_19 Pyrodigal gene 26031 27533 . + . ID=GCA008085315_01222_gene;locus_tag=GCA008085315_01222;gene=yocR contig_19 Pyrodigal CDS 26031 27533 . + 0 ID=GCA008085315_01222;Name=Transporter;locus_tag=GCA008085315_01222;product=Transporter;gene=yocR;Parent=GCA008085315_01222_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0733,COG:R,RefSeq:WP_005573853.1,SO:0001217,UniParc:UPI00022ACCEF,UniRef:UniRef100_UPI00022ACCEF,UniRef:UniRef50_P44849,UniRef:UniRef90_E6L0M3 contig_19 Pyrodigal gene 27535 27627 . + . ID=GCA008085315_01223_gene;locus_tag=GCA008085315_01223 contig_19 Pyrodigal CDS 27535 27627 . + 0 ID=GCA008085315_01223;Name=Methionine/alanine import family NSS transporter small subunit;locus_tag=GCA008085315_01223;product=Methionine/alanine import family NSS transporter small subunit;Parent=GCA008085315_01223_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_Q65PX0,UniRef:UniRef90_A0A5D0EMX8 contig_19 tRNAscan-SE gene 29383 29459 . - . ID=GCA008085315_01224_gene;locus_tag=GCA008085315_01224;gene=trnI contig_19 tRNAscan-SE tRNA 29383 29459 . - . ID=GCA008085315_01224;Name=tRNA-Ile2(cat);locus_tag=GCA008085315_01224;product=tRNA-Ile2(cat);gene=trnI;anti_codon=cat;amino_acid=Ile2;Parent=GCA008085315_01224_gene;inference=profile:tRNAscan:2.0;Note=SO:0000263 contig_19 Pyrodigal gene 29731 31368 . - . ID=GCA008085315_01225_gene;locus_tag=GCA008085315_01225 contig_19 Pyrodigal CDS 29731 31368 . - 0 ID=GCA008085315_01225;Name=pilus assembly protein TadG-related protein;locus_tag=GCA008085315_01225;product=pilus assembly protein TadG-related protein;Parent=GCA008085315_01225_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K12515,RefSeq:WP_148320890.1,SO:0001217,UniParc:UPI0011D443E8,UniRef:UniRef100_UPI0011D443E8,UniRef:UniRef50_A0AAP7GXZ9,UniRef:UniRef90_UPI00215A8951 contig_19 Pyrodigal gene 31384 31962 . - . ID=GCA008085315_01226_gene;locus_tag=GCA008085315_01226;gene=tadF contig_19 Pyrodigal CDS 31384 31962 . - 0 ID=GCA008085315_01226;Name=TadF;locus_tag=GCA008085315_01226;product=TadF;gene=tadF;Parent=GCA008085315_01226_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG6007,COG:W,KEGG:K12514,RefSeq:WP_005546830.1,SO:0001217,UniParc:UPI00022C028B,UniRef:UniRef100_UPI00022C028B,UniRef:UniRef50_A0A3S4QAR3,UniRef:UniRef90_Q9S4A5 contig_19 Pyrodigal gene 32031 32606 . - . ID=GCA008085315_01227_gene;locus_tag=GCA008085315_01227 contig_19 Pyrodigal CDS 32031 32606 . - 0 ID=GCA008085315_01227;Name=Pilus assembly protein;locus_tag=GCA008085315_01227;product=Pilus assembly protein;Parent=GCA008085315_01227_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K12513,RefSeq:WP_005573848.1,SO:0001217,UniParc:UPI00022ACCEC,UniRef:UniRef100_UPI00022ACCEC,UniRef:UniRef50_A0A336NAC4,UniRef:UniRef90_Q7X0L4 contig_19 Pyrodigal gene 32621 33382 . - . ID=GCA008085315_01228_gene;locus_tag=GCA008085315_01228;gene=tadD contig_19 Pyrodigal CDS 32621 33382 . - 0 ID=GCA008085315_01228;Name=TadD;locus_tag=GCA008085315_01228;product=TadD;gene=tadD;Parent=GCA008085315_01228_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5010,COG:W,RefSeq:WP_005546827.1,SO:0001217,UniParc:UPI00022C0289,UniRef:UniRef100_UPI00022C0289,UniRef:UniRef50_A0A486XH07,UniRef:UniRef90_Q9S4A7 contig_19 Pyrodigal gene 33372 34238 . - . ID=GCA008085315_01229_gene;locus_tag=GCA008085315_01229;gene=tadC contig_19 Pyrodigal CDS 33372 34238 . - 0 ID=GCA008085315_01229;Name=TadC;locus_tag=GCA008085315_01229;product=TadC;gene=tadC;Parent=GCA008085315_01229_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2064,COG:W,RefSeq:WP_005546825.1,SO:0001217,UniParc:UPI0001B9F3CE,UniRef:UniRef100_G4A8T5,UniRef:UniRef50_Q65RM8,UniRef:UniRef90_E1CK57 contig_19 Pyrodigal gene 34235 34417 . - . ID=GCA008085315_01230_gene;locus_tag=GCA008085315_01230 contig_19 Pyrodigal CDS 34235 34417 . - 0 ID=GCA008085315_01230;Name=hypothetical protein;locus_tag=GCA008085315_01230;product=hypothetical protein;Parent=GCA008085315_01230_gene;inference=ab initio prediction:Pyrodigal:3.5 contig_19 Pyrodigal gene 34464 35132 . - . ID=GCA008085315_01231_gene;locus_tag=GCA008085315_01231;gene=tadB;pseudogene=unitary contig_19 Pyrodigal CDS 34464 35132 . - 0 ID=GCA008085315_01231;Name=Protein dehydratase;locus_tag=GCA008085315_01231;product=Protein dehydratase;pseudogene=unitary;gene=tadB;Parent=GCA008085315_01231_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4965,COG:W,SO:0001217,UniRef:UniRef50_A3MZR7,UniRef:UniRef90_Q7X0L7 contig_19 Pyrodigal gene 35132 36412 . - . ID=GCA008085315_01232_gene;locus_tag=GCA008085315_01232;gene=tadA contig_19 Pyrodigal CDS 35132 36412 . - 0 ID=GCA008085315_01232;Name=TadA;locus_tag=GCA008085315_01232;product=TadA;gene=tadA;Parent=GCA008085315_01232_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4962,COG:W,KEGG:K02283,RefSeq:WP_005546820.1,SO:0001217,UniParc:UPI0001B9F3D0,UniRef:UniRef100_E1CIZ1,UniRef:UniRef50_W0HZA7,UniRef:UniRef90_E1CIZ1;ec_number=7.4.2.8 contig_19 Pyrodigal gene 36426 37550 . - . ID=GCA008085315_01233_gene;locus_tag=GCA008085315_01233;gene=cpaE contig_19 Pyrodigal CDS 36426 37550 . - 0 ID=GCA008085315_01233;Name=Pilus assembly protein;locus_tag=GCA008085315_01233;product=Pilus assembly protein;gene=cpaE;Parent=GCA008085315_01233_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4963,COG:W,RefSeq:WP_005538996.1,SO:0001217,UniParc:UPI00000C0245,UniRef:UniRef100_Q8GCZ9,UniRef:UniRef50_Q9CMH6,UniRef:UniRef90_Q7X0L9 contig_19 Pyrodigal gene 37566 38069 . - . ID=GCA008085315_01234_gene;locus_tag=GCA008085315_01234;gene=rcpB contig_19 Pyrodigal CDS 37566 38069 . - 0 ID=GCA008085315_01234;Name=RcpB;locus_tag=GCA008085315_01234;product=RcpB;gene=rcpB;Parent=GCA008085315_01234_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG6008,COG:W,KEGG:K12509,RefSeq:WP_005550006.1,SO:0001217,UniParc:UPI00000BF082,UniRef:UniRef100_Q9X6J2,UniRef:UniRef50_A0A336N7E2,UniRef:UniRef90_Q7X0M0 contig_19 Pyrodigal gene 38066 39448 . - . ID=GCA008085315_01235_gene;locus_tag=GCA008085315_01235;gene=cpaC contig_19 Pyrodigal CDS 38066 39448 . - 0 ID=GCA008085315_01235;Name=RcpA;locus_tag=GCA008085315_01235;product=RcpA;gene=cpaC;Parent=GCA008085315_01235_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4964,COG:W,KEGG:K02280,RefSeq:WP_005538988.1,SO:0001217,UniParc:UPI00000B7879,UniRef:UniRef100_Q9JRS7,UniRef:UniRef50_A3MZS1,UniRef:UniRef90_E1CIY8 contig_19 Pyrodigal gene 39450 40274 . - . ID=GCA008085315_01236_gene;locus_tag=GCA008085315_01236;gene=rcpC contig_19 Pyrodigal CDS 39450 40274 . - 0 ID=GCA008085315_01236;Name=RcpC;locus_tag=GCA008085315_01236;product=RcpC;gene=rcpC;Parent=GCA008085315_01236_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02279,RefSeq:WP_005538986.1,SO:0001217,UniParc:UPI00000B050A,UniRef:UniRef100_O66152,UniRef:UniRef50_U1R0Q1,UniRef:UniRef90_Q8GD01 contig_19 Pyrodigal gene 40325 40753 . - . ID=GCA008085315_01237_gene;locus_tag=GCA008085315_01237;gene=cpaA contig_19 Pyrodigal CDS 40325 40753 . - 0 ID=GCA008085315_01237;Name=Flp operon protein B;locus_tag=GCA008085315_01237;product=Flp operon protein B;gene=cpaA;Parent=GCA008085315_01237_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4960,COG:W,RefSeq:WP_005538981.1,SO:0001217,UniParc:UPI00000BE438,UniRef:UniRef100_O66151,UniRef:UniRef50_Q9CMH2,UniRef:UniRef90_Q7X0M3 contig_19 Pyrodigal gene 41094 41324 . - . ID=GCA008085315_01238_gene;locus_tag=GCA008085315_01238 contig_19 Pyrodigal CDS 41094 41324 . - 0 ID=GCA008085315_01238;Name=Fimbriae associated protein;locus_tag=GCA008085315_01238;product=Fimbriae associated protein;Parent=GCA008085315_01238_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005588026.1,SO:0001217,UniParc:UPI00000B435B,UniRef:UniRef100_Q9WW48,UniRef:UniRef50_O66149,UniRef:UniRef90_O66149 contig_19 Pyrodigal gene 41891 42355 . + . ID=GCA008085315_01239_gene;locus_tag=GCA008085315_01239;gene=ybeY contig_19 Pyrodigal CDS 41891 42355 . + 0 ID=GCA008085315_01239;Name=rRNA maturation RNase YbeY;locus_tag=GCA008085315_01239;product=rRNA maturation RNase YbeY;Dbxref=GO:0004222,GO:0004521,GO:0004540,GO:0005737,GO:0006364,GO:0008270,GO:0042254,GO:0046872;gene=ybeY;Parent=GCA008085315_01239_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0319,COG:J,RefSeq:WP_005538960.1,SO:0001217,UniParc:UPI00000BEADA,UniRef:UniRef100_Q9JRS8,UniRef:UniRef50_Q8ZDF0,UniRef:UniRef90_Q9JRS8;ec_number=3.1.-.- contig_19 Pyrodigal gene 42517 43215 . + . ID=GCA008085315_01240_gene;locus_tag=GCA008085315_01240 contig_19 Pyrodigal CDS 42517 43215 . + 0 ID=GCA008085315_01240;Name=Lipoprotein;locus_tag=GCA008085315_01240;product=Lipoprotein;Parent=GCA008085315_01240_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005538955.1,SO:0001217,UniParc:UPI00000BD016,UniRef:UniRef100_Q9JRS9,UniRef:UniRef50_A0A5D0EN77,UniRef:UniRef90_Q9JRS9 contig_19 Pyrodigal gene 43219 45141 . + . ID=GCA008085315_01241_gene;locus_tag=GCA008085315_01241;gene=tmcA contig_19 Pyrodigal CDS 43219 45141 . + 0 ID=GCA008085315_01241;Name=tRNA(Met) cytidine acetyltransferase TmcA;locus_tag=GCA008085315_01241;product=tRNA(Met) cytidine acetyltransferase TmcA;gene=tmcA;Parent=GCA008085315_01241_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1444,COG:J,RefSeq:WP_148320891.1,SO:0001217,UniParc:UPI0011D9CFC6,UniRef:UniRef100_UPI0011D9CFC6,UniRef:UniRef50_A0A379AUF2,UniRef:UniRef90_A0A5D0EN81 contig_19 Pyrodigal gene 45182 45355 . + . ID=GCA008085315_01242_gene;locus_tag=GCA008085315_01242 contig_19 Pyrodigal CDS 45182 45355 . + 0 ID=GCA008085315_01242;Name=DUF5363 domain-containing protein;locus_tag=GCA008085315_01242;product=DUF5363 domain-containing protein;Parent=GCA008085315_01242_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005546808.1,SO:0001217,UniParc:UPI0001B9F3D4,UniRef:UniRef100_UPI0001B9F3D4,UniRef:UniRef50_G4A8S3,UniRef:UniRef90_G4A8S3 contig_19 Pyrodigal gene 45483 48941 . + . ID=GCA008085315_01243_gene;locus_tag=GCA008085315_01243;gene=mfd contig_19 Pyrodigal CDS 45483 48941 . + 0 ID=GCA008085315_01243;Name=transcription-repair coupling factor;locus_tag=GCA008085315_01243;product=transcription-repair coupling factor;Dbxref=GO:0003676,GO:0003684,GO:0005524,GO:0006281;gene=mfd;Parent=GCA008085315_01243_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1197,COG:LK,KEGG:K03723,RefSeq:WP_005588021.1,SO:0001217,UniParc:UPI0002ABF35C,UniRef:UniRef100_UPI0002ABF35C,UniRef:UniRef50_A0A1L8MAT2,UniRef:UniRef90_E6KZ79;ec_number=5.6.2.4 contig_19 Pyrodigal gene 49043 49627 . + . ID=GCA008085315_01244_gene;locus_tag=GCA008085315_01244;gene=gmhA contig_19 Pyrodigal CDS 49043 49627 . + 0 ID=GCA008085315_01244;Name=phosphoheptose isomerase;locus_tag=GCA008085315_01244;product=phosphoheptose isomerase;Dbxref=GO:0005737,GO:0008270,GO:0008968,GO:0009244,GO:0097367,GO:1901135,GO:2001061;gene=gmhA;Parent=GCA008085315_01244_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0279,COG:G,KEGG:K03271,RefSeq:WP_005538945.1,SO:0001217,UniParc:UPI0001B9F44F,UniRef:UniRef100_A0A5D0F5B8,UniRef:UniRef50_P63224,UniRef:UniRef90_P45093,VFDB:VFC0258,VFDB:VFG013418;ec_number=5.3.1.28 contig_19 Pyrodigal gene 49768 50502 . + . ID=GCA008085315_01245_gene;locus_tag=GCA008085315_01245;gene=artP contig_19 Pyrodigal CDS 49768 50502 . + 0 ID=GCA008085315_01245;Name=arginine ABC transporter ATP-binding protein ArtP;locus_tag=GCA008085315_01245;product=arginine ABC transporter ATP-binding protein ArtP;Dbxref=GO:0003333,GO:0005524,GO:0015424,GO:0043190;gene=artP;Parent=GCA008085315_01245_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4161,COG:E,RefSeq:WP_005546806.1,SO:0001217,UniParc:UPI0001B9F450,UniRef:UniRef100_A0A5D0EN67,UniRef:UniRef50_P0AAF6,UniRef:UniRef90_A0A5D0EN67;ec_number=7.4.2.1 contig_19 Pyrodigal gene 50523 51242 . + . ID=GCA008085315_01246_gene;locus_tag=GCA008085315_01246;gene=hisJ contig_19 Pyrodigal CDS 50523 51242 . + 0 ID=GCA008085315_01246;Name=Arginine ABC superfamily ATP binding cassette transporter%2C binding protein;locus_tag=GCA008085315_01246;product=Arginine ABC superfamily ATP binding cassette transporter%2C binding protein;gene=hisJ;Parent=GCA008085315_01246_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0834,COG:ET,RefSeq:WP_148320892.1,SO:0001217,UniParc:UPI0011DAAADF,UniRef:UniRef100_UPI0011DAAADF,UniRef:UniRef50_P45091,UniRef:UniRef90_E6KXI7 contig_19 Pyrodigal gene 51247 51909 . + . ID=GCA008085315_01247_gene;locus_tag=GCA008085315_01247;gene=artQ contig_19 Pyrodigal CDS 51247 51909 . + 0 ID=GCA008085315_01247;Name=arginine ABC transporter permease ArtQ;locus_tag=GCA008085315_01247;product=arginine ABC transporter permease ArtQ;Dbxref=GO:0016020,GO:0022857,GO:0043190,GO:0055085,GO:0071705;gene=artQ;Parent=GCA008085315_01247_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4215,COG:E,KEGG:K09999,RefSeq:WP_005546802.1,SO:0001217,UniParc:UPI0001B9F452,UniRef:UniRef100_G4A8R8,UniRef:UniRef50_Q2NU06,UniRef:UniRef90_E6KXI8;ec_number=7.4.2.1 contig_19 Pyrodigal gene 51912 52595 . + . ID=GCA008085315_01248_gene;locus_tag=GCA008085315_01248;gene=artM contig_19 Pyrodigal CDS 51912 52595 . + 0 ID=GCA008085315_01248;Name=arginine ABC transporter permease ArtM;locus_tag=GCA008085315_01248;product=arginine ABC transporter permease ArtM;Dbxref=GO:0016020,GO:0022857,GO:0043190,GO:0071705;gene=artM;Parent=GCA008085315_01248_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4160,COG:E,KEGG:K09998,RefSeq:WP_005588018.1,SO:0001217,UniParc:UPI0001B9F453,UniRef:UniRef100_UPI0001B9F453,UniRef:UniRef50_P0AE30,UniRef:UniRef90_E6KXI9;ec_number=7.4.2.1 contig_19 Pyrodigal gene 53137 54735 . + . ID=GCA008085315_01249_gene;locus_tag=GCA008085315_01249;gene=cstA contig_19 Pyrodigal CDS 53137 54735 . + 0 ID=GCA008085315_01249;Name=Carbon starvation protein A;locus_tag=GCA008085315_01249;product=Carbon starvation protein A;gene=cstA;Parent=GCA008085315_01249_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CE,COG:COG1966,RefSeq:WP_005573823.1,SO:0001217,UniParc:UPI00022ACA21,UniRef:UniRef100_UPI00022ACA21,UniRef:UniRef50_A3N1P1,UniRef:UniRef90_E6KXJ1 contig_19 Pyrodigal gene 54999 55457 . + . ID=GCA008085315_01250_gene;locus_tag=GCA008085315_01250;gene=mraZ contig_19 Pyrodigal CDS 54999 55457 . + 0 ID=GCA008085315_01250;Name=division/cell wall cluster transcriptional repressor MraZ;locus_tag=GCA008085315_01250;product=division/cell wall cluster transcriptional repressor MraZ;Dbxref=GO:0003700,GO:0006355;gene=mraZ;Parent=GCA008085315_01250_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2001,COG:J,RefSeq:WP_005588016.1,SO:0001217,UniParc:UPI0001B9F455,UniRef:UniRef100_A0A142G1G1,UniRef:UniRef50_P22186,UniRef:UniRef90_E6KXJ2 contig_19 Pyrodigal gene 55567 56535 . + . ID=GCA008085315_01251_gene;locus_tag=GCA008085315_01251;gene=rsmH contig_19 Pyrodigal CDS 55567 56535 . + 0 ID=GCA008085315_01251;Name=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;locus_tag=GCA008085315_01251;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;Dbxref=GO:0016434;gene=rsmH;Parent=GCA008085315_01251_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0275,COG:J,KEGG:K03438,RefSeq:WP_005546795.1,SO:0001217,UniParc:UPI00022ACA1F,UniRef:UniRef100_UPI00022ACA1F,UniRef:UniRef50_B7VIZ5,UniRef:UniRef90_A0A142G1G0;ec_number=2.1.1.199 contig_19 Pyrodigal gene 56535 56852 . + . ID=GCA008085315_01252_gene;locus_tag=GCA008085315_01252;gene=ftsL contig_19 Pyrodigal CDS 56535 56852 . + 0 ID=GCA008085315_01252;Name=cell division protein FtsL;locus_tag=GCA008085315_01252;product=cell division protein FtsL;Dbxref=GO:0000910,GO:0016020;gene=ftsL;Parent=GCA008085315_01252_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3116,COG:D,KEGG:K03586,RefSeq:WP_005546793.1,SO:0001217,UniParc:UPI0001B9F457,UniRef:UniRef100_UPI0001B9F457,UniRef:UniRef50_P45058,UniRef:UniRef90_A0A142G1F9 contig_19 Pyrodigal gene 56870 58693 . + . ID=GCA008085315_01253_gene;locus_tag=GCA008085315_01253;gene=ftsI contig_19 Pyrodigal CDS 56870 58693 . + 0 ID=GCA008085315_01253;Name=Peptidoglycan D%2CD-transpeptidase FtsI;locus_tag=GCA008085315_01253;product=Peptidoglycan D%2CD-transpeptidase FtsI;gene=ftsI;Parent=GCA008085315_01253_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0768,COG:DM,RefSeq:WP_005566708.1,SO:0001217,UniParc:UPI0001B9F458,UniRef:UniRef100_UPI0001B9F458,UniRef:UniRef50_P0AD68,UniRef:UniRef90_A0A142G1F8 contig_19 Pyrodigal gene 58711 60177 . + . ID=GCA008085315_01254_gene;locus_tag=GCA008085315_01254;gene=murE contig_19 Pyrodigal CDS 58711 60177 . + 0 ID=GCA008085315_01254;Name=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;locus_tag=GCA008085315_01254;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;Dbxref=GO:0005524,GO:0008360,GO:0009058,GO:0016881,GO:0051301;gene=murE;Parent=GCA008085315_01254_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0769,COG:M,KEGG:K01928,RefSeq:WP_005546788.1,SO:0001217,UniParc:UPI0001B9F459,UniRef:UniRef100_UPI0001B9F459,UniRef:UniRef50_P45060,UniRef:UniRef90_A0A5D0EN84;ec_number=6.3.2.13 contig_19 Pyrodigal gene 60235 61563 . + . ID=GCA008085315_01255_gene;locus_tag=GCA008085315_01255;gene=murF contig_19 Pyrodigal CDS 60235 61563 . + 0 ID=GCA008085315_01255;Name=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;locus_tag=GCA008085315_01255;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;Dbxref=GO:0005524,GO:0009058,GO:0047480,GO:0071555;gene=murF;Parent=GCA008085315_01255_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0770,COG:M,KEGG:K01929,SO:0001217,UniRef:UniRef50_A0A379ATK8,UniRef:UniRef90_A0A5D0EN49;ec_number=6.3.2.10 contig_19 Pyrodigal gene 61557 62642 . + . ID=GCA008085315_01256_gene;locus_tag=GCA008085315_01256;gene=mraY contig_19 Pyrodigal CDS 61557 62642 . + 0 ID=GCA008085315_01256;Name=phospho-N-acetylmuramoyl-pentapeptide-transferase;locus_tag=GCA008085315_01256;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;Dbxref=GO:0005886,GO:0008360,GO:0008963,GO:0009252,GO:0016020,GO:0046872,GO:0051301,GO:0051992,GO:0071555;gene=mraY;Parent=GCA008085315_01256_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0472,COG:M,RefSeq:WP_005539053.1,SO:0001217,UniParc:UPI0001B9F45B,UniRef:UniRef100_A0A142G1F5,UniRef:UniRef50_P0A6W3,UniRef:UniRef90_P57816;ec_number=2.7.8.13 contig_19 Pyrodigal gene 62669 63973 . + . ID=GCA008085315_01257_gene;locus_tag=GCA008085315_01257;gene=murD contig_19 Pyrodigal CDS 62669 63973 . + 0 ID=GCA008085315_01257;Name=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;locus_tag=GCA008085315_01257;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;Dbxref=GO:0005524,GO:0005737,GO:0008360,GO:0008764,GO:0009252,GO:0051301;gene=murD;Parent=GCA008085315_01257_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0771,COG:M,KEGG:K01925,RefSeq:WP_005546781.1,SO:0001217,UniParc:UPI0001B9F45C,UniRef:UniRef100_UPI0001B9F45C,UniRef:UniRef50_Q8ZRU4,UniRef:UniRef90_A0A142G1F4;ec_number=6.3.2.9 contig_19 Pyrodigal gene 63988 65178 . + . ID=GCA008085315_01258_gene;locus_tag=GCA008085315_01258;gene=ftsW contig_19 Pyrodigal CDS 63988 65178 . + 0 ID=GCA008085315_01258;Name=putative lipid II flippase FtsW;locus_tag=GCA008085315_01258;product=putative lipid II flippase FtsW;Dbxref=GO:0009252,GO:0016020,GO:0051301;gene=ftsW;Parent=GCA008085315_01258_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0772,COG:D,KEGG:K03588,RefSeq:WP_148320893.1,SO:0001217,UniParc:UPI0011D3DEE9,UniRef:UniRef100_UPI0011D3DEE9,UniRef:UniRef50_Q7VP55,UniRef:UniRef90_A0A142G1F3 contig_19 Pyrodigal gene 65219 66283 . + . ID=GCA008085315_01259_gene;locus_tag=GCA008085315_01259;gene=murG contig_19 Pyrodigal CDS 65219 66283 . + 0 ID=GCA008085315_01259;Name=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;locus_tag=GCA008085315_01259;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;Dbxref=GO:0009252,GO:0050511;gene=murG;Parent=GCA008085315_01259_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0707,COG:M,KEGG:K02563,RefSeq:WP_005546779.1,SO:0001217,UniParc:UPI0001B9F45E,UniRef:UniRef100_UPI0001B9F45E,UniRef:UniRef50_P17443,UniRef:UniRef90_E6KWC9;ec_number=2.4.1.227 contig_19 Pyrodigal gene 66354 67784 . + . ID=GCA008085315_01260_gene;locus_tag=GCA008085315_01260;gene=murC contig_19 Pyrodigal CDS 66354 67784 . + 0 ID=GCA008085315_01260;Name=UDP-N-acetylmuramate--L-alanine ligase;locus_tag=GCA008085315_01260;product=UDP-N-acetylmuramate--L-alanine ligase;Dbxref=GO:0008763,GO:0009252;gene=murC;Parent=GCA008085315_01260_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0773,COG:M,KEGG:K01924,RefSeq:WP_148320894.1,SO:0001217,UniParc:UPI0011D74819,UniRef:UniRef100_UPI0011D74819,UniRef:UniRef50_Q9KPG8,UniRef:UniRef90_A0A142G1F1;ec_number=6.3.2.8 contig_19 Pyrodigal gene 67797 68726 . + . ID=GCA008085315_01261_gene;locus_tag=GCA008085315_01261;gene=ddlA contig_19 Pyrodigal CDS 67797 68726 . + 0 ID=GCA008085315_01261;Name=D-alanine--D-alanine ligase;locus_tag=GCA008085315_01261;product=D-alanine--D-alanine ligase;gene=ddlA;Parent=GCA008085315_01261_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1181,COG:MR,RefSeq:WP_005588014.1,SO:0001217,UniParc:UPI0001B9F460,UniRef:UniRef100_UPI0001B9F460,UniRef:UniRef50_P57819,UniRef:UniRef90_A0A336N7R4 contig_19 Pyrodigal gene 68723 69490 . + . ID=GCA008085315_01262_gene;locus_tag=GCA008085315_01262;gene=ftsQ contig_19 Pyrodigal CDS 68723 69490 . + 0 ID=GCA008085315_01262;Name=Cell division protein FtsQ;locus_tag=GCA008085315_01262;product=Cell division protein FtsQ;gene=ftsQ;Parent=GCA008085315_01262_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1589,COG:D,RefSeq:WP_005546773.1,SO:0001217,UniParc:UPI0001B9F461,UniRef:UniRef100_UPI0001B9F461,UniRef:UniRef50_C9PMX8,UniRef:UniRef90_E6KWD2 contig_19 Pyrodigal gene 69515 70795 . + . ID=GCA008085315_01263_gene;locus_tag=GCA008085315_01263;gene=ftsA contig_19 Pyrodigal CDS 69515 70795 . + 0 ID=GCA008085315_01263;Name=cell division protein FtsA;locus_tag=GCA008085315_01263;product=cell division protein FtsA;Dbxref=GO:0005515,GO:0051301;gene=ftsA;Parent=GCA008085315_01263_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0849,COG:D,RefSeq:WP_005546770.1,SO:0001217,UniParc:UPI0001B9F462,UniRef:UniRef100_UPI0001B9F462,UniRef:UniRef50_P0ABH0,UniRef:UniRef90_A0A142G1E8 contig_19 Pyrodigal gene 70879 72162 . + . ID=GCA008085315_01264_gene;locus_tag=GCA008085315_01264;gene=ftsZ contig_19 Pyrodigal CDS 70879 72162 . + 0 ID=GCA008085315_01264;Name=cell division protein FtsZ;locus_tag=GCA008085315_01264;product=cell division protein FtsZ;Dbxref=GO:0000910,GO:0003924,GO:0005525;gene=ftsZ;Parent=GCA008085315_01264_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0206,COG:D,KEGG:K03531,RefSeq:WP_005546768.1,SO:0001217,UniParc:UPI0001B9F463,UniRef:UniRef100_UPI0001B9F463,UniRef:UniRef50_P45069,UniRef:UniRef90_A0A142G1E7 contig_19 Pyrodigal gene 72200 73117 . + . ID=GCA008085315_01265_gene;locus_tag=GCA008085315_01265;gene=lpxC contig_19 Pyrodigal CDS 72200 73117 . + 0 ID=GCA008085315_01265;Name=UDP-3-O-acyl-N-acetylglucosamine deacetylase;locus_tag=GCA008085315_01265;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;Dbxref=GO:0009245,GO:0016020,GO:0046872,GO:0103117;gene=lpxC;Parent=GCA008085315_01265_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0774,COG:M,RefSeq:WP_148320895.1,SO:0001217,UniParc:UPI0011D8AEA5,UniRef:UniRef100_UPI0011D8AEA5,UniRef:UniRef50_Q6LMG1,UniRef:UniRef90_P45070;ec_number=3.5.1.108 contig_19 Pyrodigal gene 73315 74049 . + . ID=GCA008085315_01266_gene;locus_tag=GCA008085315_01266 contig_19 Pyrodigal CDS 73315 74049 . + 0 ID=GCA008085315_01266;Name=Bifunctional chorismate mutase/prephenate dehydratase;locus_tag=GCA008085315_01266;product=Bifunctional chorismate mutase/prephenate dehydratase;Parent=GCA008085315_01266_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A919LWE6 contig_19 Pyrodigal gene 74024 74476 . + . ID=GCA008085315_01267_gene;locus_tag=GCA008085315_01267 contig_19 Pyrodigal CDS 74024 74476 . + 0 ID=GCA008085315_01267;Name=Prephenate dehydratase;locus_tag=GCA008085315_01267;product=Prephenate dehydratase;Parent=GCA008085315_01267_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A4U9IH97 contig_19 Pyrodigal gene 74610 76490 . + . ID=GCA008085315_01268_gene;locus_tag=GCA008085315_01268;gene=htpG contig_19 Pyrodigal CDS 74610 76490 . + 0 ID=GCA008085315_01268;Name=molecular chaperone HtpG;locus_tag=GCA008085315_01268;product=molecular chaperone HtpG;Dbxref=GO:0005524,GO:0005737,GO:0006457,GO:0016887,GO:0051082,GO:0140662;gene=htpG;Parent=GCA008085315_01268_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0326,COG:O,RefSeq:WP_005546761.1,SO:0001217,UniParc:UPI00022ACA13,UniRef:UniRef100_UPI00022ACA13,UniRef:UniRef50_P44516,UniRef:UniRef90_P44516 contig_19 Pyrodigal gene 76556 76900 . + . ID=GCA008085315_01269_gene;locus_tag=GCA008085315_01269;gene=arsC contig_19 Pyrodigal CDS 76556 76900 . + 0 ID=GCA008085315_01269;Name=ArsC family reductase;locus_tag=GCA008085315_01269;product=ArsC family reductase;gene=arsC;Parent=GCA008085315_01269_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1393,COG:P,RefSeq:WP_005546759.1,SO:0001217,UniParc:UPI0001B9F468,UniRef:UniRef100_UPI0001B9F468,UniRef:UniRef50_P44515,UniRef:UniRef90_A0A142G1E3 contig_19 Pyrodigal gene 77037 78170 . + . ID=GCA008085315_01270_gene;locus_tag=GCA008085315_01270;gene=dapE contig_19 Pyrodigal CDS 77037 78170 . + 0 ID=GCA008085315_01270;Name=succinyl-diaminopimelate desuccinylase;locus_tag=GCA008085315_01270;product=succinyl-diaminopimelate desuccinylase;Dbxref=GO:0009014,GO:0009089;gene=dapE;Parent=GCA008085315_01270_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0624,COG:E,RefSeq:WP_005546757.1,SO:0001217,UniParc:UPI00022ACA12,UniRef:UniRef100_UPI00022ACA12,UniRef:UniRef50_P44514,UniRef:UniRef90_A0A142G1E2;ec_number=3.5.1.18 contig_19 Pyrodigal gene 78172 78852 . + . ID=GCA008085315_01271_gene;locus_tag=GCA008085315_01271;gene=ldcB contig_19 Pyrodigal CDS 78172 78852 . + 0 ID=GCA008085315_01271;Name=Bifunctional aspartokinase I/homoserine dehydrogenase I;locus_tag=GCA008085315_01271;product=Bifunctional aspartokinase I/homoserine dehydrogenase I;gene=ldcB;Parent=GCA008085315_01271_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1876,COG:M,RefSeq:WP_005560555.1,SO:0001217,UniParc:UPI00022ACA11,UniRef:UniRef100_UPI00022ACA11,UniRef:UniRef50_A5UFQ6,UniRef:UniRef90_G4A8P5 contig_19 Pyrodigal gene 79097 79720 . + . ID=GCA008085315_01272_gene;locus_tag=GCA008085315_01272;gene=nudF contig_19 Pyrodigal CDS 79097 79720 . + 0 ID=GCA008085315_01272;Name=ADP-ribose diphosphatase;locus_tag=GCA008085315_01272;product=ADP-ribose diphosphatase;Dbxref=GO:0016787,GO:0046872;gene=nudF;Parent=GCA008085315_01272_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1051,COG:F,RefSeq:WP_005546754.1,SO:0001217,UniParc:UPI0001B9F46B,UniRef:UniRef100_UPI0001B9F46B,UniRef:UniRef50_A0A2D0JQP2,UniRef:UniRef90_A0A5D0EN24;ec_number=3.6.1.13 contig_19 Pyrodigal gene 79771 80595 . + . ID=GCA008085315_01273_gene;locus_tag=GCA008085315_01273;gene=cpdA contig_19 Pyrodigal CDS 79771 80595 . + 0 ID=GCA008085315_01273;Name=3'%2C5'-cyclic-AMP phosphodiesterase;locus_tag=GCA008085315_01273;product=3'%2C5'-cyclic-AMP phosphodiesterase;Dbxref=GO:0004115;gene=cpdA;Parent=GCA008085315_01273_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1409,COG:T,RefSeq:WP_005546752.1,SO:0001217,UniParc:UPI0001B9F46C,UniRef:UniRef100_UPI0001B9F46C,UniRef:UniRef50_P44685,UniRef:UniRef90_A0A142G1D9;ec_number=3.1.4.53 contig_19 Pyrodigal gene 80692 80871 . + . ID=GCA008085315_01274_gene;locus_tag=GCA008085315_01274 contig_19 Pyrodigal CDS 80692 80871 . + 0 ID=GCA008085315_01274;Name=Transposase;locus_tag=GCA008085315_01274;product=Transposase;Parent=GCA008085315_01274_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005573798.1,SO:0001217,UniParc:UPI0001B9F46D,UniRef:UniRef100_UPI0001B9F46D,UniRef:UniRef50_A0A5D0FH29,UniRef:UniRef90_A0A5D0FH29 contig_19 Pyrodigal gene 81103 81927 . - . ID=GCA008085315_01275_gene;locus_tag=GCA008085315_01275 contig_19 Pyrodigal CDS 81103 81927 . - 0 ID=GCA008085315_01275;Name=Nucleotidyl transferase AbiEii/AbiGii toxin family protein;locus_tag=GCA008085315_01275;product=Nucleotidyl transferase AbiEii/AbiGii toxin family protein;Parent=GCA008085315_01275_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2253,COG:V,RefSeq:WP_005546751.1,SO:0001217,UniParc:UPI0001B9F46E,UniRef:UniRef100_UPI0001B9F46E,UniRef:UniRef50_A0A1V3IDK2,UniRef:UniRef90_A0A5D0EN66 contig_19 Pyrodigal gene 81900 82364 . - . ID=GCA008085315_01276_gene;locus_tag=GCA008085315_01276 contig_19 Pyrodigal CDS 81900 82364 . - 0 ID=GCA008085315_01276;Name=Protein kinase domain-containing protein;locus_tag=GCA008085315_01276;product=Protein kinase domain-containing protein;Parent=GCA008085315_01276_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005546748.1,SO:0001217,UniParc:UPI0001B9F46F,UniRef:UniRef100_UPI0001B9F46F,UniRef:UniRef50_A0A6I4C9R8,UniRef:UniRef90_A0A5D0EN31 contig_19 Pyrodigal gene 82719 83423 . + . ID=GCA008085315_01277_gene;locus_tag=GCA008085315_01277;gene=queC contig_19 Pyrodigal CDS 82719 83423 . + 0 ID=GCA008085315_01277;Name=7-cyano-7-deazaguanine synthase QueC;locus_tag=GCA008085315_01277;product=7-cyano-7-deazaguanine synthase QueC;Dbxref=GO:0008616;gene=queC;Parent=GCA008085315_01277_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0603,COG:J,KEGG:K06920,RefSeq:WP_005546747.1,SO:0001217,UniParc:UPI00022C01BE,UniRef:UniRef100_UPI00022C01BE,UniRef:UniRef50_P44124,UniRef:UniRef90_A0A142G1D6;ec_number=6.3.4.20 contig_19 Pyrodigal gene 83541 84755 . + . ID=GCA008085315_01278_gene;locus_tag=GCA008085315_01278 contig_19 Pyrodigal CDS 83541 84755 . + 0 ID=GCA008085315_01278;Name=ATP-binding protein;locus_tag=GCA008085315_01278;product=ATP-binding protein;Parent=GCA008085315_01278_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1373,COG:R,KEGG:K07133,RefSeq:WP_005546745.1,SO:0001217,UniParc:UPI0001B9F4E2,UniRef:UniRef100_UPI0001B9F4E2,UniRef:UniRef50_A0A1V6AM04,UniRef:UniRef90_A0A5D0EN40 contig_19 Pyrodigal gene 84834 85862 . - . ID=GCA008085315_01279_gene;locus_tag=GCA008085315_01279;gene=adhP contig_19 Pyrodigal CDS 84834 85862 . - 0 ID=GCA008085315_01279;Name=Alcohol dehydrogenase;locus_tag=GCA008085315_01279;product=Alcohol dehydrogenase;gene=adhP;Parent=GCA008085315_01279_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1064,COG:G,RefSeq:WP_005546742.1,SO:0001217,UniParc:UPI0001B9F4E3,UniRef:UniRef100_UPI0001B9F4E3,UniRef:UniRef50_K8P4X1,UniRef:UniRef90_A0A142G1D4 contig_19 Pyrodigal gene 86133 88280 . + . ID=GCA008085315_01280_gene;locus_tag=GCA008085315_01280;gene=rlmL contig_19 Pyrodigal CDS 86133 88280 . + 0 ID=GCA008085315_01280;Name=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;locus_tag=GCA008085315_01280;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;Dbxref=GO:0003723,GO:0008990,GO:0031167;gene=rlmL;Parent=GCA008085315_01280_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1092,COG:J,KEGG:K12297,RefSeq:WP_148320896.1,SO:0001217,UniParc:UPI0011D6D04D,UniRef:UniRef100_UPI0011D6D04D,UniRef:UniRef50_P75864,UniRef:UniRef90_A0A5D0EN60;ec_number=2.1.1.264 contig_19 Pyrodigal gene 88377 88721 . - . ID=GCA008085315_01281_gene;locus_tag=GCA008085315_01281;gene=frdD contig_19 Pyrodigal CDS 88377 88721 . - 0 ID=GCA008085315_01281;Name=fumarate reductase subunit FrdD;locus_tag=GCA008085315_01281;product=fumarate reductase subunit FrdD;gene=frdD;Parent=GCA008085315_01281_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG3080,KEGG:K00247,RefSeq:WP_005542720.1,SO:0001217,UniParc:UPI0001B9F4E5,UniRef:UniRef100_A0A142G1D2,UniRef:UniRef50_P44891,UniRef:UniRef90_A0A142G1D2;ec_number=1.3.5.1 contig_19 Pyrodigal gene 88731 89123 . - . ID=GCA008085315_01282_gene;locus_tag=GCA008085315_01282;gene=frdC contig_19 Pyrodigal CDS 88731 89123 . - 0 ID=GCA008085315_01282;Name=fumarate reductase subunit FrdC;locus_tag=GCA008085315_01282;product=fumarate reductase subunit FrdC;Dbxref=GO:0016020;gene=frdC;Parent=GCA008085315_01282_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG3029,KEGG:K00246,RefSeq:WP_005546735.1,SO:0001217,UniParc:UPI0001B9F4E6,UniRef:UniRef100_UPI0001B9F4E6,UniRef:UniRef50_A3N2H5,UniRef:UniRef90_E6KWF3;ec_number=1.3.5.1 contig_19 Pyrodigal gene 89135 89905 . - . ID=GCA008085315_01283_gene;locus_tag=GCA008085315_01283;gene=sdhB contig_19 Pyrodigal CDS 89135 89905 . - 0 ID=GCA008085315_01283;Name=succinate dehydrogenase/fumarate reductase iron-sulfur subunit;locus_tag=GCA008085315_01283;product=succinate dehydrogenase/fumarate reductase iron-sulfur subunit;Dbxref=GO:0006099,GO:0009055,GO:0016491,GO:0051536;gene=sdhB;Parent=GCA008085315_01283_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0479,RefSeq:WP_005546732.1,SO:0001217,UniParc:UPI0001B9F4E7,UniRef:UniRef100_UPI0001B9F4E7,UniRef:UniRef50_P0AC47,UniRef:UniRef90_E6KWF4 contig_19 Pyrodigal gene 89910 91718 . - . ID=GCA008085315_01284_gene;locus_tag=GCA008085315_01284;gene=frdA contig_19 Pyrodigal CDS 89910 91718 . - 0 ID=GCA008085315_01284;Name=fumarate reductase (quinol) flavoprotein subunit;locus_tag=GCA008085315_01284;product=fumarate reductase (quinol) flavoprotein subunit;Dbxref=GO:0000104,GO:0005886,GO:0006113,GO:0008177,GO:0009055,GO:0009061,GO:0016491,GO:0022900,GO:0045283,GO:0050660;gene=frdA;Parent=GCA008085315_01284_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1053,KEGG:K00244,RefSeq:WP_005546730.1,SO:0001217,UniParc:UPI0001B9F4E8,UniRef:UniRef100_UPI0001B9F4E8,UniRef:UniRef50_P00363,UniRef:UniRef90_P44894;ec_number=1.3.5.1 contig_19 Pyrodigal gene 92026 92997 . + . ID=GCA008085315_01285_gene;locus_tag=GCA008085315_01285;gene=epmA contig_19 Pyrodigal CDS 92026 92997 . + 0 ID=GCA008085315_01285;Name=elongation factor P--(R)-beta-lysine ligase;locus_tag=GCA008085315_01285;product=elongation factor P--(R)-beta-lysine ligase;Dbxref=GO:0004812,GO:0006418;gene=epmA;Parent=GCA008085315_01285_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2269,COG:J,KEGG:K04568,RefSeq:WP_005546728.1,SO:0001217,UniParc:UPI0001B9F4EA,UniRef:UniRef100_UPI0001B9F4EA,UniRef:UniRef50_P0A8N7,UniRef:UniRef90_E6KWF6;ec_number=6.3.1.- contig_19 Pyrodigal gene 93063 93830 . - . ID=GCA008085315_01286_gene;locus_tag=GCA008085315_01286;gene=fecE contig_19 Pyrodigal CDS 93063 93830 . - 0 ID=GCA008085315_01286;Name=Fe(3+) dicitrate ABC transporter ATP-binding protein FecE;locus_tag=GCA008085315_01286;product=Fe(3+) dicitrate ABC transporter ATP-binding protein FecE;Dbxref=GO:0005524;gene=fecE;Parent=GCA008085315_01286_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1120,COG:PH,RefSeq:WP_005546725.1,SO:0001217,UniParc:UPI0001B9F4EB,UniRef:UniRef100_UPI0001B9F4EB,UniRef:UniRef50_P15031,UniRef:UniRef90_A0A5D0EN30;ec_number=7.2.2.- contig_19 Pyrodigal gene 93830 94813 . - . ID=GCA008085315_01287_gene;locus_tag=GCA008085315_01287;gene=fecD contig_19 Pyrodigal CDS 93830 94813 . - 0 ID=GCA008085315_01287;Name=Fe(3+) dicitrate ABC transporter permease subunit FecD;locus_tag=GCA008085315_01287;product=Fe(3+) dicitrate ABC transporter permease subunit FecD;gene=fecD;Parent=GCA008085315_01287_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0609,COG:P,RefSeq:WP_005546723.1,SO:0001217,UniParc:UPI0001B9F4EC,UniRef:UniRef100_UPI0001B9F4EC,UniRef:UniRef50_Q9CPB9,UniRef:UniRef90_A0A5D0EN34;ec_number=7.2.2.- contig_19 Pyrodigal gene 94813 95802 . - . ID=GCA008085315_01288_gene;locus_tag=GCA008085315_01288;gene=fecC contig_19 Pyrodigal CDS 94813 95802 . - 0 ID=GCA008085315_01288;Name=iron-dicitrate ABC transporter permease FecC;locus_tag=GCA008085315_01288;product=iron-dicitrate ABC transporter permease FecC;gene=fecC;Parent=GCA008085315_01288_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0609,COG:P,RefSeq:WP_005546721.1,SO:0001217,UniParc:UPI0001B9F4ED,UniRef:UniRef100_UPI0001B9F4ED,UniRef:UniRef50_Q9CPB8,UniRef:UniRef90_A0A5D0EN38;ec_number=7.2.2.- contig_19 Pyrodigal gene 95802 96695 . - . ID=GCA008085315_01289_gene;locus_tag=GCA008085315_01289;gene=fecB contig_19 Pyrodigal CDS 95802 96695 . - 0 ID=GCA008085315_01289;Name=Fe(3+)-dicitrate ABC transporter substrate-binding protein FecB;locus_tag=GCA008085315_01289;product=Fe(3+)-dicitrate ABC transporter substrate-binding protein FecB;gene=fecB;Parent=GCA008085315_01289_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4594,COG:P,KEGG:K23181,RefSeq:WP_005546719.1,SO:0001217,UniParc:UPI0001B9F4EE,UniRef:UniRef100_UPI0001B9F4EE,UniRef:UniRef50_Q9CPB7,UniRef:UniRef90_A0A5D0EN50 contig_19 Pyrodigal gene 96765 97835 . - . ID=GCA008085315_01290_gene;locus_tag=GCA008085315_01290;gene=yaeI contig_19 Pyrodigal CDS 96765 97835 . - 0 ID=GCA008085315_01290;Name=Metallophosphoesterase;locus_tag=GCA008085315_01290;product=Metallophosphoesterase;gene=yaeI;Parent=GCA008085315_01290_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1408,COG:R,KEGG:K07098,RefSeq:WP_148320898.1,SO:0001217,UniParc:UPI0011D5555B,UniRef:UniRef100_UPI0011D5555B,UniRef:UniRef50_F5S8T9,UniRef:UniRef90_A0A142G1C3 contig_19 Pyrodigal gene 98020 98349 . + . ID=GCA008085315_01291_gene;locus_tag=GCA008085315_01291;gene=ybaB contig_19 Pyrodigal CDS 98020 98349 . + 0 ID=GCA008085315_01291;Name=YbaB/EbfC family nucleoid-associated protein;locus_tag=GCA008085315_01291;product=YbaB/EbfC family nucleoid-associated protein;Dbxref=GO:0003677,GO:0005829,GO:0043590;gene=ybaB;Parent=GCA008085315_01291_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0718,COG:K,KEGG:K09747,RefSeq:WP_005546714.1,SO:0001217,UniParc:UPI00022AC739,UniRef:UniRef100_A0A142G3C8,UniRef:UniRef50_P44711,UniRef:UniRef90_P44711 contig_19 Pyrodigal gene 98434 99036 . + . ID=GCA008085315_01292_gene;locus_tag=GCA008085315_01292;gene=recR contig_19 Pyrodigal CDS 98434 99036 . + 0 ID=GCA008085315_01292;Name=recombination mediator RecR;locus_tag=GCA008085315_01292;product=recombination mediator RecR;Dbxref=GO:0003677,GO:0006281,GO:0006310,GO:0046872;gene=recR;Parent=GCA008085315_01292_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0353,COG:L,KEGG:K06187,RefSeq:WP_005542695.1,SO:0001217,UniParc:UPI0001B9F4F1,UniRef:UniRef100_A0A142G1C2,UniRef:UniRef50_Q9PCH1,UniRef:UniRef90_A0A142G1C2 contig_19 Pyrodigal gene 99068 101005 . + . ID=GCA008085315_01293_gene;locus_tag=GCA008085315_01293;gene=topA contig_19 Pyrodigal CDS 99068 101005 . + 0 ID=GCA008085315_01293;Name=DNA topoisomerase 3;locus_tag=GCA008085315_01293;product=DNA topoisomerase 3;gene=topA;Parent=GCA008085315_01293_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0550,COG:L,KEGG:K03169,RefSeq:WP_005546712.1,SO:0001217,UniParc:UPI0001B9F4F2,UniRef:UniRef100_UPI0001B9F4F2,UniRef:UniRef50_P43704,UniRef:UniRef90_A0A448FB75;ec_number=5.6.2.1 contig_19 Pyrodigal gene 101166 101516 . + . ID=GCA008085315_01294_gene;locus_tag=GCA008085315_01294;gene=secG contig_19 Pyrodigal CDS 101166 101516 . + 0 ID=GCA008085315_01294;Name=preprotein translocase subunit SecG;locus_tag=GCA008085315_01294;product=preprotein translocase subunit SecG;Dbxref=GO:0015136,GO:0015739,GO:0016020;gene=secG;Parent=GCA008085315_01294_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1314,COG:U,RefSeq:WP_005546710.1,SO:0001217,UniParc:UPI00022C01BD,UniRef:UniRef100_UPI00022C01BD,UniRef:UniRef50_P0AG99,UniRef:UniRef90_U1S5P8 contig_19 tRNAscan-SE gene 101532 101617 . + . ID=GCA008085315_01295_gene;locus_tag=GCA008085315_01295;gene=trnL contig_19 tRNAscan-SE tRNA 101532 101617 . + . ID=GCA008085315_01295;Name=tRNA-Leu(gag);locus_tag=GCA008085315_01295;product=tRNA-Leu(gag);gene=trnL;anti_codon=gag;amino_acid=Leu;Parent=GCA008085315_01295_gene;inference=profile:tRNAscan:2.0;Note=SO:0000264 contig_19 Pyrodigal gene 101896 102336 . + . ID=GCA008085315_01296_gene;locus_tag=GCA008085315_01296 contig_19 Pyrodigal CDS 101896 102336 . + 0 ID=GCA008085315_01296;Name=integrase arm-type DNA-binding domain-containing protein;locus_tag=GCA008085315_01296;product=integrase arm-type DNA-binding domain-containing protein;Parent=GCA008085315_01296_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_233439044.1,SO:0001217,UniParc:UPI001F27AFBA,UniRef:UniRef100_UPI001F27AFBA,UniRef:UniRef50_A0AAE6JSD7,UniRef:UniRef90_UPI001E5D13BD contig_19 Pyrodigal gene 102347 103021 . + . ID=GCA008085315_01297_gene;locus_tag=GCA008085315_01297 contig_19 Pyrodigal CDS 102347 103021 . + 0 ID=GCA008085315_01297;Name=hypothetical protein;locus_tag=GCA008085315_01297;product=hypothetical protein;Parent=GCA008085315_01297_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148320901.1,SO:0001217,UniParc:UPI0011D8A958,UniRef:UniRef100_UPI0011D8A958,UniRef:UniRef50_UPI0015C5EAD1,UniRef:UniRef90_UPI0011D8EA1B contig_19 Pyrodigal gene 103031 103309 . + . ID=GCA008085315_01298_gene;locus_tag=GCA008085315_01298 contig_19 Pyrodigal CDS 103031 103309 . + 0 ID=GCA008085315_01298;Name=Lipoprotein;locus_tag=GCA008085315_01298;product=Lipoprotein;Parent=GCA008085315_01298_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_233138926.1,SO:0001217,UniParc:UPI001E4161E2,UniRef:UniRef100_UPI001E4161E2,UniRef:UniRef50_G4A8M2,UniRef:UniRef90_UPI001E4161E2 contig_19 Pyrodigal gene 103565 104338 . - . ID=GCA008085315_01299_gene;locus_tag=GCA008085315_01299;gene=mtgA contig_19 Pyrodigal CDS 103565 104338 . - 0 ID=GCA008085315_01299;Name=monofunctional biosynthetic peptidoglycan transglycosylase;locus_tag=GCA008085315_01299;product=monofunctional biosynthetic peptidoglycan transglycosylase;Dbxref=GO:0009252,GO:0009274,GO:0016020,GO:0016763;gene=mtgA;Parent=GCA008085315_01299_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0744,COG:M,KEGG:K03814,RefSeq:WP_005546557.1,SO:0001217,UniParc:UPI0001B9F4F8,UniRef:UniRef100_UPI0001B9F4F8,UniRef:UniRef50_Q8ZLR7,UniRef:UniRef90_A0A142G1B8;ec_number=2.4.99.28 contig_19 Pyrodigal gene 104316 104624 . - . ID=GCA008085315_01300_gene;locus_tag=GCA008085315_01300;gene=trpR contig_19 Pyrodigal CDS 104316 104624 . - 0 ID=GCA008085315_01300;Name=trp operon repressor;locus_tag=GCA008085315_01300;product=trp operon repressor;Dbxref=GO:0003700,GO:0006355,GO:0043565;gene=trpR;Parent=GCA008085315_01300_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2973,COG:K,KEGG:K03720,RefSeq:WP_005546559.1,SO:0001217,UniParc:UPI0001B9F4F9,UniRef:UniRef100_UPI0001B9F4F9,UniRef:UniRef50_Q9CNU9,UniRef:UniRef90_E6KWH0 contig_19 Pyrodigal gene 104657 106873 . - . ID=GCA008085315_01301_gene;locus_tag=GCA008085315_01301;gene=mltE contig_19 Pyrodigal CDS 104657 106873 . - 0 ID=GCA008085315_01301;Name=Septation protein A;locus_tag=GCA008085315_01301;product=Septation protein A;gene=mltE;Parent=GCA008085315_01301_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0741,COG:MU,RefSeq:WP_005587993.1,SO:0001217,UniParc:UPI0001B9F4FA,UniRef:UniRef100_UPI0001B9F4FA,UniRef:UniRef50_A0A336N2P2,UniRef:UniRef90_A0A5D0EN27 contig_19 Pyrodigal gene 107079 107375 . - . ID=GCA008085315_01302_gene;locus_tag=GCA008085315_01302;gene=yciI contig_19 Pyrodigal CDS 107079 107375 . - 0 ID=GCA008085315_01302;Name=YciI family protein;locus_tag=GCA008085315_01302;product=YciI family protein;gene=yciI;Parent=GCA008085315_01302_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2350,COG:QR,RefSeq:WP_005542676.1,SO:0001217,UniParc:UPI0001B9F4FB,UniRef:UniRef100_A0A142G1B5,UniRef:UniRef50_P44887,UniRef:UniRef90_A0A1V3JWK7 contig_19 Pyrodigal gene 107378 107848 . - . ID=GCA008085315_01303_gene;locus_tag=GCA008085315_01303;gene=yciA contig_19 Pyrodigal CDS 107378 107848 . - 0 ID=GCA008085315_01303;Name=acyl-CoA thioester hydrolase YciA;locus_tag=GCA008085315_01303;product=acyl-CoA thioester hydrolase YciA;Dbxref=GO:0016790;gene=yciA;Parent=GCA008085315_01303_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1607,COG:I,RefSeq:WP_005542674.1,SO:0001217,UniParc:UPI0001B9F4FC,UniRef:UniRef100_A0A5D0EN17,UniRef:UniRef50_A0A3L0WCY4,UniRef:UniRef90_A0A5D0EN17;ec_number=3.1.2.20 contig_19 Pyrodigal gene 107852 108403 . - . ID=GCA008085315_01304_gene;locus_tag=GCA008085315_01304;gene=yciB contig_19 Pyrodigal CDS 107852 108403 . - 0 ID=GCA008085315_01304;Name=septation protein A;locus_tag=GCA008085315_01304;product=septation protein A;gene=yciB;Parent=GCA008085315_01304_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2917,COG:D,KEGG:K06190,RefSeq:WP_005542672.1,SO:0001217,UniParc:UPI0001CA778E,UniRef:UniRef100_A0A5D0EN12,UniRef:UniRef50_P43810,UniRef:UniRef90_E6KWH4 contig_19 Pyrodigal gene 108409 109167 . - . ID=GCA008085315_01305_gene;locus_tag=GCA008085315_01305 contig_19 Pyrodigal CDS 108409 109167 . - 0 ID=GCA008085315_01305;Name=Beta-methylgalactoside transporter;locus_tag=GCA008085315_01305;product=Beta-methylgalactoside transporter;Parent=GCA008085315_01305_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005587991.1,SO:0001217,UniParc:UPI0001B9F4FE,UniRef:UniRef100_UPI0001B9F4FE,UniRef:UniRef50_A0A448FB64,UniRef:UniRef90_A0A142G1B2 contig_19 Pyrodigal gene 109439 109867 . + . ID=GCA008085315_01306_gene;locus_tag=GCA008085315_01306 contig_19 Pyrodigal CDS 109439 109867 . + 0 ID=GCA008085315_01306;Name=Outer membrane protein W;locus_tag=GCA008085315_01306;product=Outer membrane protein W;Parent=GCA008085315_01306_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_E8KIN8 contig_19 Pyrodigal gene 109861 110085 . + . ID=GCA008085315_01307_gene;locus_tag=GCA008085315_01307;gene=ompW contig_19 Pyrodigal CDS 109861 110085 . + 0 ID=GCA008085315_01307;Name=OmpW family protein;locus_tag=GCA008085315_01307;product=OmpW family protein;gene=ompW;Parent=GCA008085315_01307_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_E8KIN7 contig_19 Pyrodigal gene 110152 111828 . - . ID=GCA008085315_01308_gene;locus_tag=GCA008085315_01308;gene=recN contig_19 Pyrodigal CDS 110152 111828 . - 0 ID=GCA008085315_01308;Name=DNA repair protein RecN;locus_tag=GCA008085315_01308;product=DNA repair protein RecN;Dbxref=GO:0005524,GO:0006281,GO:0006310;gene=recN;Parent=GCA008085315_01308_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0497,COG:L,RefSeq:WP_005564065.1,SO:0001217,UniParc:UPI0001B9F501,UniRef:UniRef100_UPI0001B9F501,UniRef:UniRef50_P44496,UniRef:UniRef90_A0A5D0ENB2 contig_19 Pyrodigal gene 111902 112819 . - . ID=GCA008085315_01309_gene;locus_tag=GCA008085315_01309;gene=nadK contig_19 Pyrodigal CDS 111902 112819 . - 0 ID=GCA008085315_01309;Name=NAD(+) kinase;locus_tag=GCA008085315_01309;product=NAD(+) kinase;gene=nadK;Parent=GCA008085315_01309_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0061,COG:H,KEGG:K00858,RefSeq:WP_005546573.1,SO:0001217,UniParc:UPI0001B9F502,UniRef:UniRef100_UPI0001B9F502,UniRef:UniRef50_P44497,UniRef:UniRef90_A0A142G1B0;ec_number=2.7.1.23 contig_19 Pyrodigal gene 112960 113538 . + . ID=GCA008085315_01310_gene;locus_tag=GCA008085315_01310;gene=grpE contig_19 Pyrodigal CDS 112960 113538 . + 0 ID=GCA008085315_01310;Name=nucleotide exchange factor GrpE;locus_tag=GCA008085315_01310;product=nucleotide exchange factor GrpE;Dbxref=GO:0000774,GO:0006457,GO:0042803,GO:0051087;gene=grpE;Parent=GCA008085315_01310_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0576,COG:O,KEGG:K03687,RefSeq:WP_005546575.1,SO:0001217,UniParc:UPI0001B9F504,UniRef:UniRef100_UPI0001B9F504,UniRef:UniRef50_P43732,UniRef:UniRef90_G4ABG7 contig_19 Pyrodigal gene 113649 116720 . - . ID=GCA008085315_01311_gene;locus_tag=GCA008085315_01311;gene=cirA contig_19 Pyrodigal CDS 113649 116720 . - 0 ID=GCA008085315_01311;Name=Hemoglobin binding protein A;locus_tag=GCA008085315_01311;product=Hemoglobin binding protein A;gene=cirA;Parent=GCA008085315_01311_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1629,COG:P,KEGG:K16087,RefSeq:WP_005546577.1,SO:0001217,UniParc:UPI00000B5F71,UniRef:UniRef100_Q93TF7,UniRef:UniRef50_Q47952,UniRef:UniRef90_Q932Z6 contig_19 Pyrodigal gene 116910 118928 . - . ID=GCA008085315_01312_gene;locus_tag=GCA008085315_01312;gene=mnmC contig_19 Pyrodigal CDS 116910 118928 . - 0 ID=GCA008085315_01312;Name=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;locus_tag=GCA008085315_01312;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;Dbxref=GO:0004808,GO:0008033;gene=mnmC;Parent=GCA008085315_01312_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4121,COG:J,KEGG:K15461,RefSeq:WP_148320903.1,SO:0001217,UniParc:UPI0011D6971E,UniRef:UniRef100_UPI0011D6971E,UniRef:UniRef50_P44246,UniRef:UniRef90_A0A5D0EN04;ec_number=2.1.1.61 contig_19 Pyrodigal gene 119098 120318 . + . ID=GCA008085315_01313_gene;locus_tag=GCA008085315_01313;gene=fabB contig_19 Pyrodigal CDS 119098 120318 . + 0 ID=GCA008085315_01313;Name=beta-ketoacyl-ACP synthase I;locus_tag=GCA008085315_01313;product=beta-ketoacyl-ACP synthase I;Dbxref=GO:0004315,GO:0005829,GO:0006633;gene=fabB;Parent=GCA008085315_01313_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0304,COG:IQ,RefSeq:WP_005551205.1,SO:0001217,UniParc:UPI0001B9F506,UniRef:UniRef100_A0A5D0KT88,UniRef:UniRef50_P0A953,UniRef:UniRef90_P43710;ec_number=2.3.1.41 contig_19 Pyrodigal gene 120459 122318 . + . ID=GCA008085315_01314_gene;locus_tag=GCA008085315_01314;gene=hPtr contig_19 Pyrodigal CDS 120459 122318 . + 0 ID=GCA008085315_01314;Name=Aerobic respiration control sensor protein;locus_tag=GCA008085315_01314;product=Aerobic respiration control sensor protein;gene=hPtr;Parent=GCA008085315_01314_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2198,COG:T,RefSeq:WP_005546582.1,SO:0001217,UniParc:UPI0001B9F57E,UniRef:UniRef100_UPI0001B9F57E,UniRef:UniRef50_G4ABG3,UniRef:UniRef90_G4ABG3 contig_19 Pyrodigal gene 122392 123402 . - . ID=GCA008085315_01315_gene;locus_tag=GCA008085315_01315;gene=mglC contig_19 Pyrodigal CDS 122392 123402 . - 0 ID=GCA008085315_01315;Name=galactose/methyl galactoside ABC transporter permease MglC;locus_tag=GCA008085315_01315;product=galactose/methyl galactoside ABC transporter permease MglC;Dbxref=GO:0005886,GO:0008643,GO:0016020,GO:0022857,GO:0055085;gene=mglC;Parent=GCA008085315_01315_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4211,COG:G,KEGG:K10541,RefSeq:WP_005546584.1,SO:0001217,UniParc:UPI0001B9F57F,UniRef:UniRef100_UPI0001B9F57F,UniRef:UniRef50_P23200,UniRef:UniRef90_P44885 contig_19 Pyrodigal gene 123421 124959 . - . ID=GCA008085315_01316_gene;locus_tag=GCA008085315_01316;gene=mglA contig_19 Pyrodigal CDS 123421 124959 . - 0 ID=GCA008085315_01316;Name=galactose/methyl galactoside ABC transporter ATP-binding protein MglA;locus_tag=GCA008085315_01316;product=galactose/methyl galactoside ABC transporter ATP-binding protein MglA;Dbxref=GO:0005524,GO:0005886,GO:0008643,GO:0016020,GO:0016887,GO:0043211;gene=mglA;Parent=GCA008085315_01316_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1129,COG:G,KEGG:K10542,RefSeq:WP_005546586.1,SO:0001217,UniParc:UPI0001B9F580,UniRef:UniRef100_UPI0001B9F580,UniRef:UniRef50_P0AAG8,UniRef:UniRef90_P44884;ec_number=7.5.2.11 contig_19 Pyrodigal gene 125034 126026 . - . ID=GCA008085315_01317_gene;locus_tag=GCA008085315_01317;gene=mglB contig_19 Pyrodigal CDS 125034 126026 . - 0 ID=GCA008085315_01317;Name=galactose/glucose ABC transporter substrate-binding protein MglB;locus_tag=GCA008085315_01317;product=galactose/glucose ABC transporter substrate-binding protein MglB;Dbxref=GO:0030246;gene=mglB;Parent=GCA008085315_01317_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1879,COG:G,RefSeq:WP_005587985.1,SO:0001217,UniParc:UPI0002ACECC5,UniRef:UniRef100_UPI0002ACECC5,UniRef:UniRef50_A0A2N5ETT2,UniRef:UniRef90_E6KWI6 contig_19 Pyrodigal gene 126241 127254 . - . ID=GCA008085315_01318_gene;locus_tag=GCA008085315_01318;gene=purR contig_19 Pyrodigal CDS 126241 127254 . - 0 ID=GCA008085315_01318;Name=Mgl repressor and galactose ultrainduction factor;locus_tag=GCA008085315_01318;product=Mgl repressor and galactose ultrainduction factor;gene=purR;Parent=GCA008085315_01318_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1609,COG:K,RefSeq:WP_005567849.1,SO:0001217,UniParc:UPI0001B9F582,UniRef:UniRef100_UPI0001B9F582,UniRef:UniRef50_P31766,UniRef:UniRef90_A0A336N1Z7 contig_19 Pyrodigal gene 127506 128549 . + . ID=GCA008085315_01319_gene;locus_tag=GCA008085315_01319;gene=galT contig_19 Pyrodigal CDS 127506 128549 . + 0 ID=GCA008085315_01319;Name=galactose-1-phosphate uridylyltransferase;locus_tag=GCA008085315_01319;product=galactose-1-phosphate uridylyltransferase;Dbxref=GO:0006012,GO:0008108,GO:0008270;gene=galT;Parent=GCA008085315_01319_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1085,COG:G,KEGG:K00965,RefSeq:WP_005546591.1,SO:0001217,UniParc:UPI0001B9F583,UniRef:UniRef100_UPI0001B9F583,UniRef:UniRef50_P07902,UniRef:UniRef90_F0EV19;ec_number=2.7.7.12 contig_19 Pyrodigal gene 128616 129770 . + . ID=GCA008085315_01320_gene;locus_tag=GCA008085315_01320;gene=galK contig_19 Pyrodigal CDS 128616 129770 . + 0 ID=GCA008085315_01320;Name=galactokinase;locus_tag=GCA008085315_01320;product=galactokinase;Dbxref=GO:0004335,GO:0005524,GO:0006012,GO:0046835;gene=galK;Parent=GCA008085315_01320_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0153,COG:G,KEGG:K00849,RefSeq:WP_005546593.1,SO:0001217,UniParc:UPI0001B9F584,UniRef:UniRef100_UPI0001B9F584,UniRef:UniRef50_P31767,UniRef:UniRef90_A0A142G1A1;ec_number=2.7.1.6 contig_19 Pyrodigal gene 129764 130795 . + . ID=GCA008085315_01321_gene;locus_tag=GCA008085315_01321;gene=galM contig_19 Pyrodigal CDS 129764 130795 . + 0 ID=GCA008085315_01321;Name=galactose-1-epimerase;locus_tag=GCA008085315_01321;product=galactose-1-epimerase;Dbxref=GO:0004034,GO:0006012;gene=galM;Parent=GCA008085315_01321_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2017,COG:G,RefSeq:WP_005567842.1,SO:0001217,UniParc:UPI00022ADEBE,UniRef:UniRef100_UPI00022ADEBE,UniRef:UniRef50_P31765,UniRef:UniRef90_A0A142G1A0;ec_number=5.1.3.3 contig_19 tRNAscan-SE gene 130895 130981 . + . ID=GCA008085315_01322_gene;locus_tag=GCA008085315_01322;gene=trnL contig_19 tRNAscan-SE tRNA 130895 130981 . + . ID=GCA008085315_01322;Name=tRNA-Leu(cag);locus_tag=GCA008085315_01322;product=tRNA-Leu(cag);gene=trnL;anti_codon=cag;amino_acid=Leu;Parent=GCA008085315_01322_gene;inference=profile:tRNAscan:2.0;Note=SO:0000264 contig_19 Pyrodigal gene 131060 132559 . - . ID=GCA008085315_01323_gene;locus_tag=GCA008085315_01323;gene=dsbB contig_19 Pyrodigal CDS 131060 132559 . - 0 ID=GCA008085315_01323;Name=Disulfide bond formation protein B;locus_tag=GCA008085315_01323;product=Disulfide bond formation protein B;gene=dsbB;Parent=GCA008085315_01323_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1495,COG:O,RefSeq:WP_005546598.1,SO:0001217,UniParc:UPI0001B9F586,UniRef:UniRef100_UPI0001B9F586,UniRef:UniRef50_A0A5D0KTQ9,UniRef:UniRef90_A0A5D0KTQ9 contig_19 Pyrodigal gene 132578 132745 . - . ID=GCA008085315_01324_gene;locus_tag=GCA008085315_01324 contig_19 Pyrodigal CDS 132578 132745 . - 0 ID=GCA008085315_01324;Name=hypothetical protein;locus_tag=GCA008085315_01324;product=hypothetical protein;Parent=GCA008085315_01324_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005542624.1,SO:0001217,UniParc:UPI00022AB7ED,UniRef:UniRef100_G4A5Z0,UniRef:UniRef50_C9PNW0,UniRef:UniRef90_G4A5Z0 contig_19 Pyrodigal gene 132838 134271 . - . ID=GCA008085315_01325_gene;locus_tag=GCA008085315_01325;gene=citT contig_19 Pyrodigal CDS 132838 134271 . - 0 ID=GCA008085315_01325;Name=Anion permease;locus_tag=GCA008085315_01325;product=Anion permease;gene=citT;Parent=GCA008085315_01325_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0471,COG:G,KEGG:K03319,RefSeq:WP_005542618.1,SO:0001217,UniParc:UPI0001B9F587,UniRef:UniRef100_A0A142G198,UniRef:UniRef50_P75763,UniRef:UniRef90_A0A1V3J5R4 contig_19 Pyrodigal gene 134258 135670 . - . ID=GCA008085315_01326_gene;locus_tag=GCA008085315_01326;gene=citX contig_19 Pyrodigal CDS 134258 135670 . - 0 ID=GCA008085315_01326;Name=putative 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase;locus_tag=GCA008085315_01326;product=putative 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase;gene=citX;Parent=GCA008085315_01326_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3697,COG:HI,KEGG:K13927,RefSeq:WP_148320906.1,SO:0001217,UniParc:UPI0011DB2EBF,UniRef:UniRef100_UPI0011DB2EBF,UniRef:UniRef50_P44458,UniRef:UniRef90_A0A5D0EMZ9;ec_number=2.7.7.61 contig_19 Pyrodigal gene 135864 137366 . - . ID=GCA008085315_01327_gene;locus_tag=GCA008085315_01327;gene=citF contig_19 Pyrodigal CDS 135864 137366 . - 0 ID=GCA008085315_01327;Name=citrate lyase subunit alpha;locus_tag=GCA008085315_01327;product=citrate lyase subunit alpha;Dbxref=GO:0005737,GO:0006084,GO:0006113,GO:0008814,GO:0008815,GO:0009346;gene=citF;Parent=GCA008085315_01327_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG3051,KEGG:K01643,RefSeq:WP_148320907.1,SO:0001217,UniParc:UPI0011DC2EBD,UniRef:UniRef100_UPI0011DC2EBD,UniRef:UniRef50_P75726,UniRef:UniRef90_P44459;ec_number=4.1.3.6 contig_19 Pyrodigal gene 137381 138256 . - . ID=GCA008085315_01328_gene;locus_tag=GCA008085315_01328;gene=citE contig_19 Pyrodigal CDS 137381 138256 . - 0 ID=GCA008085315_01328;Name=citrate (pro-3S)-lyase subunit beta;locus_tag=GCA008085315_01328;product=citrate (pro-3S)-lyase subunit beta;Dbxref=GO:0005737,GO:0006084,GO:0006113,GO:0008815,GO:0009346;gene=citE;Parent=GCA008085315_01328_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2301,COG:G,RefSeq:WP_005541885.1,SO:0001217,UniParc:UPI0001B9F58A,UniRef:UniRef100_A0AAC8XZ42,UniRef:UniRef50_P17725,UniRef:UniRef90_I2NK29;ec_number=4.1.3.6 contig_19 Pyrodigal gene 138253 138540 . - . ID=GCA008085315_01329_gene;locus_tag=GCA008085315_01329;gene=citD contig_19 Pyrodigal CDS 138253 138540 . - 0 ID=GCA008085315_01329;Name=citrate lyase acyl carrier protein;locus_tag=GCA008085315_01329;product=citrate lyase acyl carrier protein;Dbxref=GO:0005737,GO:0006113,GO:0008815,GO:0009346;gene=citD;Parent=GCA008085315_01329_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG3052,RefSeq:WP_005541883.1,SO:0001217,UniParc:UPI0001B9F58B,UniRef:UniRef100_A0A142G194,UniRef:UniRef50_Q6D421,UniRef:UniRef90_Q4QPM0;ec_number=4.1.3.6 contig_19 Pyrodigal gene 138580 139587 . - . ID=GCA008085315_01330_gene;locus_tag=GCA008085315_01330;gene=citC contig_19 Pyrodigal CDS 138580 139587 . - 0 ID=GCA008085315_01330;Name=[citrate (pro-3S)-lyase] ligase;locus_tag=GCA008085315_01330;product=[citrate (pro-3S)-lyase] ligase;Dbxref=GO:0006101,GO:0008771;gene=citC;Parent=GCA008085315_01330_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG3053,KEGG:K01910,RefSeq:WP_148320908.1,SO:0001217,UniParc:UPI0011D94917,UniRef:UniRef100_UPI0011D94917,UniRef:UniRef50_P44462,UniRef:UniRef90_A0A5D0EMZ6;ec_number=6.2.1.22 contig_19 Pyrodigal gene 139833 140729 . + . ID=GCA008085315_01331_gene;locus_tag=GCA008085315_01331;gene=corC contig_19 Pyrodigal CDS 139833 140729 . + 0 ID=GCA008085315_01331;Name=CNNM family magnesium/cobalt transport protein CorC;locus_tag=GCA008085315_01331;product=CNNM family magnesium/cobalt transport protein CorC;Dbxref=GO:0050660;gene=corC;Parent=GCA008085315_01331_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4535,COG:P,RefSeq:WP_005546609.1,SO:0001217,UniParc:UPI0001B9F58E,UniRef:UniRef100_A0A142G192,UniRef:UniRef50_A0A4Y7ZYM4,UniRef:UniRef90_A0A142G192 contig_19 Pyrodigal gene 141122 142666 . + . ID=GCA008085315_01332_gene;locus_tag=GCA008085315_01332;gene=lnt contig_19 Pyrodigal CDS 141122 142666 . + 0 ID=GCA008085315_01332;Name=apolipoprotein N-acyltransferase;locus_tag=GCA008085315_01332;product=apolipoprotein N-acyltransferase;Dbxref=GO:0016020,GO:0016410,GO:0042158;gene=lnt;Parent=GCA008085315_01332_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0815,COG:M,RefSeq:WP_148333972.1,SO:0001217,UniParc:UPI0011DC35BA,UniRef:UniRef100_UPI0011DC35BA,UniRef:UniRef50_P44626,UniRef:UniRef90_A0A142G191;ec_number=2.3.1.269 contig_19 Pyrodigal gene 142729 142947 . - . ID=GCA008085315_01333_gene;locus_tag=GCA008085315_01333;gene=infA contig_19 Pyrodigal CDS 142729 142947 . - 0 ID=GCA008085315_01333;Name=translation initiation factor IF-1;locus_tag=GCA008085315_01333;product=translation initiation factor IF-1;Dbxref=GO:0003743,GO:0005829,GO:0006413,GO:0019843,GO:0043022;gene=infA;Parent=GCA008085315_01333_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0361,COG:J,KEGG:K02518,RefSeq:WP_005541870.1,SO:0001217,UniParc:UPI0001B9F590,UniRef:UniRef100_A0A142G190,UniRef:UniRef50_P57898,UniRef:UniRef90_P57898 contig_19 Pyrodigal gene 143167 144474 . + . ID=GCA008085315_01334_gene;locus_tag=GCA008085315_01334;gene=pepB contig_19 Pyrodigal CDS 143167 144474 . + 0 ID=GCA008085315_01334;Name=aminopeptidase PepB;locus_tag=GCA008085315_01334;product=aminopeptidase PepB;Dbxref=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gene=pepB;Parent=GCA008085315_01334_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0260,COG:E,RefSeq:WP_005567820.1,SO:0001217,UniParc:UPI0001B9F592,UniRef:UniRef100_UPI0001B9F592,UniRef:UniRef50_P58474,UniRef:UniRef90_E6KWJ5;ec_number=3.4.11.23 contig_19 Pyrodigal gene 144486 144911 . + . ID=GCA008085315_01335_gene;locus_tag=GCA008085315_01335;gene=ndk contig_19 Pyrodigal CDS 144486 144911 . + 0 ID=GCA008085315_01335;Name=nucleoside-diphosphate kinase;locus_tag=GCA008085315_01335;product=nucleoside-diphosphate kinase;Dbxref=GO:0004550;gene=ndk;Parent=GCA008085315_01335_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0105,COG:F,RefSeq:WP_005567819.1,SO:0001217,UniParc:UPI00022ADEB6,UniRef:UniRef100_UPI00022ADEB6,UniRef:UniRef50_O67528,UniRef:UniRef90_A0A142G188;ec_number=2.7.4.6 contig_19 Pyrodigal gene 145047 146198 . + . ID=GCA008085315_01336_gene;locus_tag=GCA008085315_01336;gene=dspB contig_19 Pyrodigal CDS 145047 146198 . + 0 ID=GCA008085315_01336;Name=glycoside hydrolase dispersin B;locus_tag=GCA008085315_01336;product=glycoside hydrolase dispersin B;gene=dspB;Parent=GCA008085315_01336_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_005541862,COG:COG3525,COG:G,KEGG:K12373,RefSeq:WP_148333973.1,SO:0001217,UniParc:UPI0011D6A160,UniRef:UniRef100_UPI0011D6A160,UniRef:UniRef50_A0A3N4N5K8,UniRef:UniRef90_Q840G9;ec_number=3.2.1.52 contig_19 Pyrodigal gene 146282 147394 . - . ID=GCA008085315_01337_gene;locus_tag=GCA008085315_01337;gene=apbC contig_19 Pyrodigal CDS 146282 147394 . - 0 ID=GCA008085315_01337;Name=iron-sulfur cluster carrier protein ApbC;locus_tag=GCA008085315_01337;product=iron-sulfur cluster carrier protein ApbC;Dbxref=GO:0005524,GO:0016226,GO:0016887,GO:0051536;gene=apbC;Parent=GCA008085315_01337_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0489,COG:D,RefSeq:WP_005574220.1,SO:0001217,UniParc:UPI0001B9F596,UniRef:UniRef100_UPI0001B9F596,UniRef:UniRef50_P45135,UniRef:UniRef90_E6KWJ8 contig_19 Pyrodigal gene 147567 149627 . + . ID=GCA008085315_01338_gene;locus_tag=GCA008085315_01338;gene=metG contig_19 Pyrodigal CDS 147567 149627 . + 0 ID=GCA008085315_01338;Name=methionine--tRNA ligase;locus_tag=GCA008085315_01338;product=methionine--tRNA ligase;Dbxref=GO:0000166,GO:0004825,GO:0005524,GO:0006431;gene=metG;Parent=GCA008085315_01338_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0143,COG:J,RefSeq:WP_148320910.1,SO:0001217,UniParc:UPI0011D9A58D,UniRef:UniRef100_UPI0011D9A58D,UniRef:UniRef50_A8FWN7,UniRef:UniRef90_U1QWW1;ec_number=6.1.1.10 contig_19 Pyrodigal gene 149761 149955 . - . ID=GCA008085315_01339_gene;locus_tag=GCA008085315_01339;gene=iscX contig_19 Pyrodigal CDS 149761 149955 . - 0 ID=GCA008085315_01339;Name=Fe-S cluster assembly protein IscX;locus_tag=GCA008085315_01339;product=Fe-S cluster assembly protein IscX;Dbxref=GO:0005506,GO:0016226;gene=iscX;Parent=GCA008085315_01339_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2975,COG:O,RefSeq:WP_005546623.1,SO:0001217,UniParc:UPI0001B9F598,UniRef:UniRef100_UPI0001B9F598,UniRef:UniRef50_Q8FF46,UniRef:UniRef90_A0A142G1Y7 contig_19 Pyrodigal gene 149955 150296 . - . ID=GCA008085315_01340_gene;locus_tag=GCA008085315_01340;gene=fdx contig_19 Pyrodigal CDS 149955 150296 . - 0 ID=GCA008085315_01340;Name=ISC system 2Fe-2S type ferredoxin;locus_tag=GCA008085315_01340;product=ISC system 2Fe-2S type ferredoxin;Dbxref=GO:0005829,GO:0009055,GO:0016226,GO:0022900,GO:0046872,GO:0051537,GO:0140647;gene=fdx;Parent=GCA008085315_01340_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0633,RefSeq:WP_005542241.1,SO:0001217,UniParc:UPI0001B9F599,UniRef:UniRef100_A0A142G1Y8,UniRef:UniRef50_P44428,UniRef:UniRef90_P44428 contig_19 Pyrodigal gene 150308 152167 . - . ID=GCA008085315_01341_gene;locus_tag=GCA008085315_01341;gene=hscA contig_19 Pyrodigal CDS 150308 152167 . - 0 ID=GCA008085315_01341;Name=Fe-S protein assembly chaperone HscA;locus_tag=GCA008085315_01341;product=Fe-S protein assembly chaperone HscA;Dbxref=GO:0005515,GO:0005524,GO:0006457,GO:0016226,GO:0016887;gene=hscA;Parent=GCA008085315_01341_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0443,COG:O,RefSeq:WP_005546625.1,SO:0001217,UniParc:UPI00022AA0A2,UniRef:UniRef100_A0A336N3G8,UniRef:UniRef50_P0A6Z1,UniRef:UniRef90_E6KWK2;ec_number=3.6.4.- contig_19 Pyrodigal gene 152188 152709 . - . ID=GCA008085315_01342_gene;locus_tag=GCA008085315_01342;gene=hscB contig_19 Pyrodigal CDS 152188 152709 . - 0 ID=GCA008085315_01342;Name=Fe-S protein assembly co-chaperone HscB;locus_tag=GCA008085315_01342;product=Fe-S protein assembly co-chaperone HscB;Dbxref=GO:0001671,GO:0044571,GO:0051087;gene=hscB;Parent=GCA008085315_01342_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1076,COG:O,RefSeq:WP_005567814.1,SO:0001217,UniParc:UPI00022AA0A3,UniRef:UniRef100_A0A3S4PU90,UniRef:UniRef50_Q57006,UniRef:UniRef90_A0A3S4PU90 contig_19 Pyrodigal gene 152721 153044 . - . ID=GCA008085315_01343_gene;locus_tag=GCA008085315_01343;gene=iscA contig_19 Pyrodigal CDS 152721 153044 . - 0 ID=GCA008085315_01343;Name=iron-sulfur cluster assembly protein IscA;locus_tag=GCA008085315_01343;product=iron-sulfur cluster assembly protein IscA;gene=iscA;Parent=GCA008085315_01343_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0316,COG:O,RefSeq:WP_005546629.1,SO:0001217,UniParc:UPI0001B9F59C,UniRef:UniRef100_A0A336N5S3,UniRef:UniRef50_Q8ZCS3,UniRef:UniRef90_A0A142G1Z1 contig_19 Pyrodigal gene 153176 153559 . - . ID=GCA008085315_01344_gene;locus_tag=GCA008085315_01344;gene=iscU contig_19 Pyrodigal CDS 153176 153559 . - 0 ID=GCA008085315_01344;Name=Iron-sulfur cluster assembly scaffold protein IscU;locus_tag=GCA008085315_01344;product=Iron-sulfur cluster assembly scaffold protein IscU;gene=iscU;Parent=GCA008085315_01344_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0822,COG:O,RefSeq:WP_005542252.1,SO:0001217,UniParc:UPI0001B9F59D,UniRef:UniRef100_A0A142G1Z2,UniRef:UniRef50_Q9ZD61,UniRef:UniRef90_A0A142G1Z2 contig_19 Pyrodigal gene 153619 154833 . - . ID=GCA008085315_01345_gene;locus_tag=GCA008085315_01345;gene=iscS contig_19 Pyrodigal CDS 153619 154833 . - 0 ID=GCA008085315_01345;Name=IscS subfamily cysteine desulfurase;locus_tag=GCA008085315_01345;product=IscS subfamily cysteine desulfurase;Dbxref=GO:0005737,GO:0030170,GO:0031071,GO:0044571,GO:0046872,GO:0051537;gene=iscS;Parent=GCA008085315_01345_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1104,COG:E,KEGG:K04487,RefSeq:WP_005546631.1,SO:0001217,UniParc:UPI0001B9F59E,UniRef:UniRef100_UPI0001B9F59E,UniRef:UniRef50_P25374,UniRef:UniRef90_Q57337;ec_number=2.8.1.7 contig_19 Pyrodigal gene 154887 155360 . - . ID=GCA008085315_01346_gene;locus_tag=GCA008085315_01346;gene=iscR contig_19 Pyrodigal CDS 154887 155360 . - 0 ID=GCA008085315_01346;Name=Fe-S cluster assembly transcriptional regulator IscR;locus_tag=GCA008085315_01346;product=Fe-S cluster assembly transcriptional regulator IscR;Dbxref=GO:0003690,GO:0003700,GO:0006355;gene=iscR;Parent=GCA008085315_01346_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1959,COG:K,RefSeq:WP_005542255.1,SO:0001217,UniParc:UPI0001B9F59F,UniRef:UniRef100_A0A142G1Z4,UniRef:UniRef50_G2FHK0,UniRef:UniRef90_A0A142G1Z4 contig_19 Pyrodigal gene 155438 156082 . - . ID=GCA008085315_01347_gene;locus_tag=GCA008085315_01347;gene=trmJ contig_19 Pyrodigal CDS 155438 156082 . - 0 ID=GCA008085315_01347;Name=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;locus_tag=GCA008085315_01347;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;Dbxref=GO:0003723,GO:0006396,GO:0008173;gene=trmJ;Parent=GCA008085315_01347_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0565,COG:J,KEGG:K15396,SO:0001217,UniRef:UniRef50_Q2NS29,UniRef:UniRef90_A0A5D0EIN0;ec_number=2.1.1.200 contig_19 Pyrodigal gene 156315 157115 . + . ID=GCA008085315_01348_gene;locus_tag=GCA008085315_01348;gene=suhB contig_19 Pyrodigal CDS 156315 157115 . + 0 ID=GCA008085315_01348;Name=inositol-1-monophosphatase;locus_tag=GCA008085315_01348;product=inositol-1-monophosphatase;Dbxref=GO:0008934,GO:0046854;gene=suhB;Parent=GCA008085315_01348_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0483,COG:G,KEGG:K01092,RefSeq:WP_005546635.1,SO:0001217,UniParc:UPI0001B9F5A1,UniRef:UniRef100_UPI0001B9F5A1,UniRef:UniRef50_P0ADG4,UniRef:UniRef90_A0A142G1Z6;ec_number=3.1.3.25 contig_19 Pyrodigal gene 157168 159279 . - . ID=GCA008085315_01349_gene;locus_tag=GCA008085315_01349 contig_19 Pyrodigal CDS 157168 159279 . - 0 ID=GCA008085315_01349;Name=DUF945 domain-containing protein;locus_tag=GCA008085315_01349;product=DUF945 domain-containing protein;Parent=GCA008085315_01349_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005587921.1,SO:0001217,UniParc:UPI0001B9F614,UniRef:UniRef100_UPI000375643B,UniRef:UniRef50_U1S8J6,UniRef:UniRef90_G4A5T9 contig_19 Infernal gene 159372 159473 . - . ID=GCA008085315_01350_gene;locus_tag=GCA008085315_01350;gene=AaHKsRNA22 contig_19 Infernal ncRNA 159372 159473 2.6e-18 - . ID=GCA008085315_01350;Name=Aggregatibacter sRNA 22;locus_tag=GCA008085315_01350;product=Aggregatibacter sRNA 22;Dbxref=RFAM:RF02902;Parent=GCA008085315_01350_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02902 contig_19 Pyrodigal gene 159558 160604 . - . ID=GCA008085315_01351_gene;locus_tag=GCA008085315_01351;gene=fbpC contig_19 Pyrodigal CDS 159558 160604 . - 0 ID=GCA008085315_01351;Name=ferric ABC transporter ATP-binding protein;locus_tag=GCA008085315_01351;product=ferric ABC transporter ATP-binding protein;Dbxref=GO:0005524,GO:0016020,GO:0022857,GO:0043190,GO:0055085;gene=fbpC;Parent=GCA008085315_01351_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3842,COG:E,RefSeq:WP_148320911.1,SO:0001217,UniParc:UPI0011D44BD4,UniRef:UniRef100_UPI0011D44BD4,UniRef:UniRef50_P37009,UniRef:UniRef90_A0A142FYL5 contig_19 Pyrodigal gene 160620 162677 . - . ID=GCA008085315_01352_gene;locus_tag=GCA008085315_01352;gene=fbpB contig_19 Pyrodigal CDS 160620 162677 . - 0 ID=GCA008085315_01352;Name=Fe3+ ABC transporter permease;locus_tag=GCA008085315_01352;product=Fe3+ ABC transporter permease;gene=fbpB;Parent=GCA008085315_01352_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1178,COG:P,KEGG:K02011,RefSeq:WP_148320912.1,SO:0001217,UniParc:UPI0011D6A315,UniRef:UniRef100_UPI0011D6A315,UniRef:UniRef50_Q57341,UniRef:UniRef90_A0A377J2D4 contig_19 Pyrodigal gene 162705 163748 . - . ID=GCA008085315_01353_gene;locus_tag=GCA008085315_01353;gene=afuA contig_19 Pyrodigal CDS 162705 163748 . - 0 ID=GCA008085315_01353;Name=ABC transporter substrate-binding protein;locus_tag=GCA008085315_01353;product=ABC transporter substrate-binding protein;gene=afuA;Parent=GCA008085315_01353_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1840,COG:GH,KEGG:K02012,RefSeq:WP_005546640.1,SO:0001217,UniParc:UPI00022C0149,UniRef:UniRef100_UPI00022C0149,UniRef:UniRef50_P43951,UniRef:UniRef90_A0A142FYL3 contig_19 Pyrodigal gene 163910 164950 . - . ID=GCA008085315_01354_gene;locus_tag=GCA008085315_01354;gene=afuA contig_19 Pyrodigal CDS 163910 164950 . - 0 ID=GCA008085315_01354;Name=putative protein HI_0131;locus_tag=GCA008085315_01354;product=putative protein HI_0131;Dbxref=GO:0015888,GO:0030288,GO:0030975,GO:0030976;gene=afuA;Parent=GCA008085315_01354_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1840,COG:GH,KEGG:K02012,RefSeq:WP_005546642.1,SO:0001217,UniParc:UPI0001B9F618,UniRef:UniRef100_UPI0001B9F618,UniRef:UniRef50_P43951,UniRef:UniRef90_P43951 contig_19 Pyrodigal gene 165259 165909 . + . ID=GCA008085315_01355_gene;locus_tag=GCA008085315_01355;gene=udk contig_19 Pyrodigal CDS 165259 165909 . + 0 ID=GCA008085315_01355;Name=uridine kinase;locus_tag=GCA008085315_01355;product=uridine kinase;Dbxref=GO:0004849;gene=udk;Parent=GCA008085315_01355_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0572,COG:F,KEGG:K00876,RefSeq:WP_005546644.1,SO:0001217,UniParc:UPI0001B9F619,UniRef:UniRef100_UPI0001B9F619,UniRef:UniRef50_P44533,UniRef:UniRef90_A0A142FYL1;ec_number=2.7.1.48 contig_19 Pyrodigal gene 165919 166503 . + . ID=GCA008085315_01356_gene;locus_tag=GCA008085315_01356;gene=dcd contig_19 Pyrodigal CDS 165919 166503 . + 0 ID=GCA008085315_01356;Name=dCTP deaminase;locus_tag=GCA008085315_01356;product=dCTP deaminase;Dbxref=GO:0000166,GO:0006226,GO:0006229,GO:0008829,GO:0015949;gene=dcd;Parent=GCA008085315_01356_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0717,COG:F,KEGG:K01494,RefSeq:WP_005546646.1,SO:0001217,UniParc:UPI0001B9F61A,UniRef:UniRef100_UPI0001B9F61A,UniRef:UniRef50_A6VMP5,UniRef:UniRef90_Q4QP54;ec_number=3.5.4.13 contig_19 Pyrodigal gene 166504 167706 . + . ID=GCA008085315_01357_gene;locus_tag=GCA008085315_01357 contig_19 Pyrodigal CDS 166504 167706 . + 0 ID=GCA008085315_01357;Name=AsmA-like C-terminal domain-containing protein;locus_tag=GCA008085315_01357;product=AsmA-like C-terminal domain-containing protein;Parent=GCA008085315_01357_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005546647.1,SO:0001217,UniParc:UPI0001B9F61B,UniRef:UniRef100_UPI0001B9F61B,UniRef:UniRef50_U1R2I5,UniRef:UniRef90_A0A142FYK9 contig_19 Pyrodigal gene 167708 168904 . + . ID=GCA008085315_01358_gene;locus_tag=GCA008085315_01358;gene=araJ contig_19 Pyrodigal CDS 167708 168904 . + 0 ID=GCA008085315_01358;Name=sugar transporter;locus_tag=GCA008085315_01358;product=sugar transporter;Dbxref=GO:0022857,GO:0055085;gene=araJ;Parent=GCA008085315_01358_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2814,COG:G,KEGG:K08159,RefSeq:WP_148320913.1,SO:0001217,UniParc:UPI0011D32BCC,UniRef:UniRef100_UPI0011D32BCC,UniRef:UniRef50_Q88K63,UniRef:UniRef90_A0A5D0EP03 contig_19 Pyrodigal gene 168974 170506 . - . ID=GCA008085315_01359_gene;locus_tag=GCA008085315_01359;gene=der contig_19 Pyrodigal CDS 168974 170506 . - 0 ID=GCA008085315_01359;Name=ribosome biogenesis GTPase Der;locus_tag=GCA008085315_01359;product=ribosome biogenesis GTPase Der;Dbxref=GO:0003924,GO:0005525,GO:0005737,GO:0042254,GO:0043022;gene=der;Parent=GCA008085315_01359_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1160,COG:J,RefSeq:WP_148320914.1,SO:0001217,UniParc:UPI0011D6B910,UniRef:UniRef100_UPI0011D6B910,UniRef:UniRef50_P44536,UniRef:UniRef90_U1QGB9;ec_number=3.6.5.- contig_19 Pyrodigal gene 170794 171777 . + . ID=GCA008085315_01360_gene;locus_tag=GCA008085315_01360;gene=dnaJ contig_19 Pyrodigal CDS 170794 171777 . + 0 ID=GCA008085315_01360;Name=Curved DNA-binding protein;locus_tag=GCA008085315_01360;product=Curved DNA-binding protein;gene=dnaJ;Parent=GCA008085315_01360_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0484,COG:O,RefSeq:WP_005546653.1,SO:0001217,UniParc:UPI0001B9F61E,UniRef:UniRef100_UPI0001B9F61E,UniRef:UniRef50_A0A0K1N5Q2,UniRef:UniRef90_G4A5U9 contig_19 Pyrodigal gene 171800 172090 . + . ID=GCA008085315_01361_gene;locus_tag=GCA008085315_01361;gene=merR contig_19 Pyrodigal CDS 171800 172090 . + 0 ID=GCA008085315_01361;Name=MerR family transcriptional regulator;locus_tag=GCA008085315_01361;product=MerR family transcriptional regulator;gene=merR;Parent=GCA008085315_01361_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005546655.1,SO:0001217,UniParc:UPI0001B9F61F,UniRef:UniRef100_UPI0001B9F61F,UniRef:UniRef50_L1NL90,UniRef:UniRef90_A0A142FYK5 contig_19 Pyrodigal gene 172155 173453 . - . ID=GCA008085315_01362_gene;locus_tag=GCA008085315_01362;gene=purA contig_19 Pyrodigal CDS 172155 173453 . - 0 ID=GCA008085315_01362;Name=adenylosuccinate synthase;locus_tag=GCA008085315_01362;product=adenylosuccinate synthase;Dbxref=GO:0000287,GO:0004019,GO:0005525,GO:0005737,GO:0009152,GO:0044208,GO:0046040;gene=purA;Parent=GCA008085315_01362_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0104,COG:F,KEGG:K01939,RefSeq:WP_148320915.1,SO:0001217,UniParc:UPI0011DBAC9A,UniRef:UniRef100_UPI0011DBAC9A,UniRef:UniRef50_P45283,UniRef:UniRef90_P45283;ec_number=6.3.4.4 contig_19 Pyrodigal gene 173541 174506 . - . ID=GCA008085315_01363_gene;locus_tag=GCA008085315_01363;gene=cmoB contig_19 Pyrodigal CDS 173541 174506 . - 0 ID=GCA008085315_01363;Name=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;locus_tag=GCA008085315_01363;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;Dbxref=GO:0002098,GO:0016765;gene=cmoB;Parent=GCA008085315_01363_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2227,COG:H,RefSeq:WP_005546659.1,SO:0001217,UniParc:UPI0001B9F621,UniRef:UniRef100_UPI0001B9F621,UniRef:UniRef50_B8F571,UniRef:UniRef90_E6KWL5;ec_number=2.5.1.- contig_19 Pyrodigal gene 174520 176040 . - . ID=GCA008085315_01364_gene;locus_tag=GCA008085315_01364;gene=putP contig_19 Pyrodigal CDS 174520 176040 . - 0 ID=GCA008085315_01364;Name=sodium/proline symporter PutP;locus_tag=GCA008085315_01364;product=sodium/proline symporter PutP;Dbxref=GO:0005298,GO:0006814,GO:0015824,GO:0016020,GO:0031402;gene=putP;Parent=GCA008085315_01364_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0591,COG:E,RefSeq:WP_005574244.1,SO:0001217,UniParc:UPI0001B9F622,UniRef:UniRef100_UPI0001B9F622,UniRef:UniRef50_P45174,UniRef:UniRef90_A0A5D0EP06 contig_19 Pyrodigal gene 176181 177656 . + . ID=GCA008085315_01365_gene;locus_tag=GCA008085315_01365;gene=rng contig_19 Pyrodigal CDS 176181 177656 . + 0 ID=GCA008085315_01365;Name=ribonuclease G;locus_tag=GCA008085315_01365;product=ribonuclease G;Dbxref=GO:0003723,GO:0004540,GO:0006396;gene=rng;Parent=GCA008085315_01365_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1530,COG:J,RefSeq:WP_005546663.1,SO:0001217,UniParc:UPI0001B9F623,UniRef:UniRef100_UPI0001B9F623,UniRef:UniRef50_P45175,UniRef:UniRef90_E6KWL7;ec_number=3.1.26.- contig_19 Pyrodigal gene 177773 178420 . + . ID=GCA008085315_01366_gene;locus_tag=GCA008085315_01366;gene=grxB contig_19 Pyrodigal CDS 177773 178420 . + 0 ID=GCA008085315_01366;Name=glutaredoxin 2;locus_tag=GCA008085315_01366;product=glutaredoxin 2;Dbxref=GO:0004362,GO:0005515,GO:0006749;gene=grxB;Parent=GCA008085315_01366_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2999,COG:O,RefSeq:WP_005546665.1,SO:0001217,UniParc:UPI0001B9F624,UniRef:UniRef100_UPI0001B9F624,UniRef:UniRef50_Q9CNB4,UniRef:UniRef90_A0A5D0ENY5 contig_19 Pyrodigal gene 178436 179134 . + . ID=GCA008085315_01367_gene;locus_tag=GCA008085315_01367;gene=cobB contig_19 Pyrodigal CDS 178436 179134 . + 0 ID=GCA008085315_01367;Name=NAD-dependent protein deacylase;locus_tag=GCA008085315_01367;product=NAD-dependent protein deacylase;Dbxref=GO:0005737,GO:0032041,GO:0036054,GO:0036055,GO:0046969,GO:0046970,GO:0070403,GO:0097372,GO:0140765,GO:0141222;gene=cobB;Parent=GCA008085315_01367_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0846,COG:O,RefSeq:WP_148320917.1,SO:0001217,UniParc:UPI0011DB757E,UniRef:UniRef100_UPI0011DB757E,UniRef:UniRef50_Q9ZAB8,UniRef:UniRef90_Q9ZAB8;ec_number=2.3.1.286 contig_19 Pyrodigal gene 179207 179578 . + . ID=GCA008085315_01368_gene;locus_tag=GCA008085315_01368 contig_19 Pyrodigal CDS 179207 179578 . + 0 ID=GCA008085315_01368;Name=helix-turn-helix domain-containing protein;locus_tag=GCA008085315_01368;product=helix-turn-helix domain-containing protein;Parent=GCA008085315_01368_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005546670.1,SO:0001217,UniParc:UPI0001B9F626,UniRef:UniRef100_UPI0001B9F626,UniRef:UniRef50_A0A2M8RX27,UniRef:UniRef90_UPI00024348B6 contig_19 Pyrodigal gene 179718 180029 . + . ID=GCA008085315_01369_gene;locus_tag=GCA008085315_01369 contig_19 Pyrodigal CDS 179718 180029 . + 0 ID=GCA008085315_01369;Name=hypothetical protein;locus_tag=GCA008085315_01369;product=hypothetical protein;Parent=GCA008085315_01369_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_UPI00197B564B contig_19 Pyrodigal gene 179978 180505 . - . ID=GCA008085315_01370_gene;locus_tag=GCA008085315_01370 contig_19 Pyrodigal CDS 179978 180505 . - 0 ID=GCA008085315_01370;Name=putative domain-containing protein;locus_tag=GCA008085315_01370;product=putative domain-containing protein;Parent=GCA008085315_01370_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_Q7VMR9 contig_19 Pyrodigal gene 180799 180978 . + . ID=GCA008085315_01371_gene;locus_tag=GCA008085315_01371 contig_19 Pyrodigal CDS 180799 180978 . + 0 ID=GCA008085315_01371;Name=Antitoxin;locus_tag=GCA008085315_01371;product=Antitoxin;Parent=GCA008085315_01371_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_019518131.1,SO:0001217,UniParc:UPI00036E2167,UniRef:UniRef100_UPI00036E2167,UniRef:UniRef50_A0A142G2P4,UniRef:UniRef90_UPI00036E2167 contig_19 Pyrodigal gene 180975 181253 . + . ID=GCA008085315_01372_gene;locus_tag=GCA008085315_01372 contig_19 Pyrodigal CDS 180975 181253 . + 0 ID=GCA008085315_01372;Name=Type II toxin-antitoxin system RelE/ParE family toxin;locus_tag=GCA008085315_01372;product=Type II toxin-antitoxin system RelE/ParE family toxin;Parent=GCA008085315_01372_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005540916.1,SO:0001217,UniParc:UPI00022AC753,UniRef:UniRef100_A0A142G2P5,UniRef:UniRef50_U1QIV9,UniRef:UniRef90_A7TUI9 contig_19 Pyrodigal gene 181292 181471 . + . ID=GCA008085315_01373_gene;locus_tag=GCA008085315_01373 contig_19 Pyrodigal CDS 181292 181471 . + 0 ID=GCA008085315_01373;Name=hypothetical protein;locus_tag=GCA008085315_01373;product=hypothetical protein;Parent=GCA008085315_01373_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005540917.1,SO:0001217,UniParc:UPI0001B9F629,UniRef:UniRef100_A0A142G2P6,UniRef:UniRef50_A0A142G2P6,UniRef:UniRef90_A0A142G2P6 contig_19 Pyrodigal gene 182044 182298 . + . ID=GCA008085315_01374_gene;locus_tag=GCA008085315_01374 contig_19 Pyrodigal CDS 182044 182298 . + 0 ID=GCA008085315_01374;Name=Transcriptional regulator;locus_tag=GCA008085315_01374;product=Transcriptional regulator;Parent=GCA008085315_01374_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005540922.1,SO:0001217,UniParc:UPI0001B9F62A,UniRef:UniRef100_A0A142G2P7,UniRef:UniRef50_A1JK15,UniRef:UniRef90_A0A142G2P7 contig_19 Pyrodigal gene 182301 182645 . + . ID=GCA008085315_01375_gene;locus_tag=GCA008085315_01375;gene=mazF contig_19 Pyrodigal CDS 182301 182645 . + 0 ID=GCA008085315_01375;Name=type II toxin-antitoxin system PemK/MazF family toxin;locus_tag=GCA008085315_01375;product=type II toxin-antitoxin system PemK/MazF family toxin;gene=mazF;Parent=GCA008085315_01375_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2337,COG:V,RefSeq:WP_005546678.1,SO:0001217,UniParc:UPI0001B9F62B,UniRef:UniRef100_UPI0001B9F62B,UniRef:UniRef50_A0A0W0YZ11,UniRef:UniRef90_UPI0001B9F62B contig_19 Pyrodigal gene 182729 182995 . + . ID=GCA008085315_01376_gene;locus_tag=GCA008085315_01376;gene=vagC contig_19 Pyrodigal CDS 182729 182995 . + 0 ID=GCA008085315_01376;Name=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;locus_tag=GCA008085315_01376;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;gene=vagC;Parent=GCA008085315_01376_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4456,COG:S,KEGG:K18829,RefSeq:WP_005540929.1,SO:0001217,UniParc:UPI00000B59E5,UniRef:UniRef100_Q9Z384,UniRef:UniRef50_Q9Z384,UniRef:UniRef90_Q9Z384 contig_19 Pyrodigal gene 183214 183882 . + . ID=GCA008085315_01377_gene;locus_tag=GCA008085315_01377;gene=cdtA contig_19 Pyrodigal CDS 183214 183882 . + 0 ID=GCA008085315_01377;Name=cytolethal distending toxin subunit Aa-CdtA;locus_tag=GCA008085315_01377;product=cytolethal distending toxin subunit Aa-CdtA;Dbxref=GO:0009279,GO:0030246,GO:0090729;gene=cdtA;Parent=GCA008085315_01377_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_005540930,KEGG:K11013,RefSeq:WP_005540930.1,SO:0001217,UniParc:UPI000012746A,UniRef:UniRef100_O87120,UniRef:UniRef50_O06522,UniRef:UniRef90_O06522 contig_19 Pyrodigal gene 183897 184748 . + . ID=GCA008085315_01378_gene;locus_tag=GCA008085315_01378;gene=cdtB contig_19 Pyrodigal CDS 183897 184748 . + 0 ID=GCA008085315_01378;Name=cytolethal distending toxin nuclease subunit Aa-CdtB;locus_tag=GCA008085315_01378;product=cytolethal distending toxin nuclease subunit Aa-CdtB;gene=cdtB;Parent=GCA008085315_01378_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_005567793,RefSeq:WP_005546686.1,SO:0001217,UniParc:UPI00000B3417,UniRef:UniRef100_Q9S676,UniRef:UniRef50_A0A379EXE8,UniRef:UniRef90_A0A379EXE8 contig_19 Pyrodigal gene 184759 185319 . + . ID=GCA008085315_01379_gene;locus_tag=GCA008085315_01379;gene=cdtC contig_19 Pyrodigal CDS 184759 185319 . + 0 ID=GCA008085315_01379;Name=cytolethal distending toxin subunit Aa-CdtC;locus_tag=GCA008085315_01379;product=cytolethal distending toxin subunit Aa-CdtC;gene=cdtC;Parent=GCA008085315_01379_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_005540933,KEGG:K11015,RefSeq:WP_005540933.1,SO:0001217,UniParc:UPI00000B6CC9,UniRef:UniRef100_Q7DK11,UniRef:UniRef50_Q7DK11,UniRef:UniRef90_Q7DK11 contig_19 Pyrodigal gene 185702 185812 . - . ID=GCA008085315_01380_gene;locus_tag=GCA008085315_01380 contig_19 Pyrodigal CDS 185702 185812 . - 0 ID=GCA008085315_01380;Name=hypothetical protein;locus_tag=GCA008085315_01380;product=hypothetical protein;Parent=GCA008085315_01380_gene;inference=ab initio prediction:Pyrodigal:3.5 contig_19 Pyrodigal gene 186270 186425 . - . ID=GCA008085315_01381_gene;locus_tag=GCA008085315_01381 contig_19 Pyrodigal CDS 186270 186425 . - 0 ID=GCA008085315_01381;Name=hypothetical protein;locus_tag=GCA008085315_01381;product=hypothetical protein;Parent=GCA008085315_01381_gene;inference=ab initio prediction:Pyrodigal:3.5 contig_19 Pyrodigal gene 186422 186613 . - . ID=GCA008085315_01382_gene;locus_tag=GCA008085315_01382 contig_19 Pyrodigal CDS 186422 186613 . - 0 ID=GCA008085315_01382;Name=hypothetical protein;locus_tag=GCA008085315_01382;product=hypothetical protein;Parent=GCA008085315_01382_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=PFAM:PF13614.12,PFAM:PF01656.29 contig_19 tRNAscan-SE gene 186683 186758 . - . ID=GCA008085315_01383_gene;locus_tag=GCA008085315_01383;gene=trnK contig_19 tRNAscan-SE tRNA 186683 186758 . - . ID=GCA008085315_01383;Name=tRNA-Lys(ttt);locus_tag=GCA008085315_01383;product=tRNA-Lys(ttt);gene=trnK;anti_codon=ttt;amino_acid=Lys;Parent=GCA008085315_01383_gene;inference=profile:tRNAscan:2.0;Note=SO:0000265 contig_19 tRNAscan-SE gene 186811 186897 . - . ID=GCA008085315_01384_gene;locus_tag=GCA008085315_01384;gene=trnL contig_19 tRNAscan-SE tRNA 186811 186897 . - . ID=GCA008085315_01384;Name=tRNA-Leu(taa);locus_tag=GCA008085315_01384;product=tRNA-Leu(taa);gene=trnL;anti_codon=taa;amino_acid=Leu;Parent=GCA008085315_01384_gene;inference=profile:tRNAscan:2.0;Note=SO:0000264 contig_19 tRNAscan-SE gene 186899 186974 . - . ID=GCA008085315_01385_gene;locus_tag=GCA008085315_01385;gene=trnG contig_19 tRNAscan-SE tRNA 186899 186974 . - . ID=GCA008085315_01385;Name=tRNA-Gly(gcc);locus_tag=GCA008085315_01385;product=tRNA-Gly(gcc);gene=trnG;anti_codon=gcc;amino_acid=Gly;Parent=GCA008085315_01385_gene;inference=profile:tRNAscan:2.0;Note=SO:0000260 contig_19 Pyrodigal gene 187135 187692 . - . ID=GCA008085315_01386_gene;locus_tag=GCA008085315_01386;gene=pgsA contig_19 Pyrodigal CDS 187135 187692 . - 0 ID=GCA008085315_01386;Name=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;locus_tag=GCA008085315_01386;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;Dbxref=GO:0008444,GO:0008654,GO:0016020;gene=pgsA;Parent=GCA008085315_01386_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0558,COG:I,KEGG:K00995,RefSeq:WP_005541115.1,SO:0001217,UniParc:UPI0001B9F62E,UniRef:UniRef100_A0A5D0KT43,UniRef:UniRef50_Q6D364,UniRef:UniRef90_A0A5D0KT43;ec_number=2.7.8.5 contig_19 Infernal gene 187824 187919 . - . ID=GCA008085315_01387_gene;locus_tag=GCA008085315_01387;gene=AaHKsRNA22 contig_19 Infernal ncRNA 187824 187919 9.6e-06 - . ID=GCA008085315_01387;Name=Aggregatibacter sRNA 22;locus_tag=GCA008085315_01387;product=Aggregatibacter sRNA 22;Dbxref=RFAM:RF02902;Parent=GCA008085315_01387_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02902 contig_19 Pyrodigal gene 187947 189137 . + . ID=GCA008085315_01388_gene;locus_tag=GCA008085315_01388;gene=metC contig_19 Pyrodigal CDS 187947 189137 . + 0 ID=GCA008085315_01388;Name=cystathionine beta-lyase;locus_tag=GCA008085315_01388;product=cystathionine beta-lyase;Dbxref=GO:0006520,GO:0019346,GO:0030170,GO:0047804;gene=metC;Parent=GCA008085315_01388_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0626,COG:E,RefSeq:WP_005546694.1,SO:0001217,UniParc:UPI0001B9F62F,UniRef:UniRef100_UPI0001B9F62F,UniRef:UniRef50_P06721,UniRef:UniRef90_A0A5D0EP02;ec_number=4.4.1.13 contig_19 Pyrodigal gene 189351 190403 . + . ID=GCA008085315_01389_gene;locus_tag=GCA008085315_01389;gene=ompC contig_19 Pyrodigal CDS 189351 190403 . + 0 ID=GCA008085315_01389;Name=Porin;locus_tag=GCA008085315_01389;product=Porin;gene=ompC;Parent=GCA008085315_01389_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3203,COG:M,RefSeq:WP_005541120.1,SO:0001217,UniParc:UPI0001B9F630,UniRef:UniRef100_A0A142FYJ6,UniRef:UniRef50_A0AAP7GWU8,UniRef:UniRef90_A0A142FYJ6 contig_19 Pyrodigal gene 190547 190774 . + . ID=GCA008085315_01390_gene;locus_tag=GCA008085315_01390 contig_19 Pyrodigal CDS 190547 190774 . + 0 ID=GCA008085315_01390;Name=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;locus_tag=GCA008085315_01390;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;Parent=GCA008085315_01390_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005567787.1,SO:0001217,UniParc:UPI00022ADB89,UniRef:UniRef100_UPI00022ADB89,UniRef:UniRef50_UPI00022ADB89,UniRef:UniRef90_UPI00022ADB89 contig_19 Pyrodigal gene 190852 191979 . - . ID=GCA008085315_01391_gene;locus_tag=GCA008085315_01391;gene=dnaJ contig_19 Pyrodigal CDS 190852 191979 . - 0 ID=GCA008085315_01391;Name=molecular chaperone DnaJ;locus_tag=GCA008085315_01391;product=molecular chaperone DnaJ;Dbxref=GO:0005515,GO:0005524,GO:0005737,GO:0006260,GO:0006457,GO:0008270,GO:0009408,GO:0031072,GO:0042026,GO:0051082,GO:0051085;gene=dnaJ;Parent=GCA008085315_01391_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0484,COG:O,RefSeq:WP_148320921.1,SO:0001217,UniParc:UPI0011DB7A30,UniRef:UniRef100_UPI0011DB7A30,UniRef:UniRef50_P08622,UniRef:UniRef90_P77866;ec_number=1.8.4.- contig_19 Pyrodigal gene 192414 194315 . - . ID=GCA008085315_01392_gene;locus_tag=GCA008085315_01392;gene=dnaK contig_19 Pyrodigal CDS 192414 194315 . - 0 ID=GCA008085315_01392;Name=molecular chaperone DnaK;locus_tag=GCA008085315_01392;product=molecular chaperone DnaK;Dbxref=GO:0005524,GO:0006457,GO:0016887,GO:0051082,GO:0140662;gene=dnaK;Parent=GCA008085315_01392_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0443,COG:O,RefSeq:WP_148320922.1,SO:0001217,UniParc:UPI0011DAACA6,UniRef:UniRef100_UPI0011DAACA6,UniRef:UniRef50_P43736,UniRef:UniRef90_P71331 contig_19 Pyrodigal gene 194601 196034 . + . ID=GCA008085315_01393_gene;locus_tag=GCA008085315_01393;gene=ydgA contig_19 Pyrodigal CDS 194601 196034 . + 0 ID=GCA008085315_01393;Name=GTP-binding protein;locus_tag=GCA008085315_01393;product=GTP-binding protein;gene=ydgA;Parent=GCA008085315_01393_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5339,COG:S,RefSeq:WP_005544691.1,SO:0001217,UniParc:UPI0001B9F634,UniRef:UniRef100_UPI0001B9F634,UniRef:UniRef50_E6KX39,UniRef:UniRef90_G4A5W8 contig_19 Infernal gene 196237 196313 . + . ID=GCA008085315_01394_gene;locus_tag=GCA008085315_01394;gene=AaHKsRNA20 contig_19 Infernal ncRNA 196237 196313 8.2e-16 + . ID=GCA008085315_01394;Name=Aggregatibacter sRNA 20;locus_tag=GCA008085315_01394;product=Aggregatibacter sRNA 20;Dbxref=RFAM:RF02898;Parent=GCA008085315_01394_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02898 contig_19 Pyrodigal gene 196394 198127 . - . ID=GCA008085315_01395_gene;locus_tag=GCA008085315_01395;gene=argS contig_19 Pyrodigal CDS 196394 198127 . - 0 ID=GCA008085315_01395;Name=arginine--tRNA ligase;locus_tag=GCA008085315_01395;product=arginine--tRNA ligase;Dbxref=GO:0004814,GO:0005524,GO:0005737,GO:0006420;gene=argS;Parent=GCA008085315_01395_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0018,COG:J,KEGG:K01887,RefSeq:WP_109853759.1,SO:0001217,UniParc:UPI000D6DEFBD,UniRef:UniRef100_UPI000D6DEFBD,UniRef:UniRef50_P11875,UniRef:UniRef90_E6KX40;ec_number=6.1.1.19 contig_19 Pyrodigal gene 198224 198811 . + . ID=GCA008085315_01396_gene;locus_tag=GCA008085315_01396;gene=yecM contig_19 Pyrodigal CDS 198224 198811 . + 0 ID=GCA008085315_01396;Name=VOC family protein;locus_tag=GCA008085315_01396;product=VOC family protein;gene=yecM;Parent=GCA008085315_01396_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3102,COG:R,KEGG:K09907,RefSeq:WP_005567779.1,SO:0001217,UniParc:UPI00022AC838,UniRef:UniRef100_UPI00022AC838,UniRef:UniRef50_P44262,UniRef:UniRef90_G4A5X0 contig_19 Pyrodigal gene 198853 199308 . + . ID=GCA008085315_01397_gene;locus_tag=GCA008085315_01397;gene=slyB contig_19 Pyrodigal CDS 198853 199308 . + 0 ID=GCA008085315_01397;Name=Glycine zipper 2TM domain-containing protein;locus_tag=GCA008085315_01397;product=Glycine zipper 2TM domain-containing protein;gene=slyB;Parent=GCA008085315_01397_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3133,COG:M,KEGG:K06077,RefSeq:WP_005542443.1,SO:0001217,UniParc:UPI0001B9F6AA,UniRef:UniRef100_A0A142G2K8,UniRef:UniRef50_A0A1V3TLB7,UniRef:UniRef90_A0A142G2K8 contig_19 Pyrodigal gene 199448 200530 . + . ID=GCA008085315_01398_gene;locus_tag=GCA008085315_01398;gene=prfA contig_19 Pyrodigal CDS 199448 200530 . + 0 ID=GCA008085315_01398;Name=peptide chain release factor 1;locus_tag=GCA008085315_01398;product=peptide chain release factor 1;Dbxref=GO:0003747,GO:0005737,GO:0006415,GO:0016149;gene=prfA;Parent=GCA008085315_01398_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0216,COG:J,KEGG:K02835,RefSeq:WP_005544683.1,SO:0001217,UniParc:UPI0001B9F6AB,UniRef:UniRef100_UPI0001B9F6AB,UniRef:UniRef50_P0A7I0,UniRef:UniRef90_Q65TB1 contig_19 Pyrodigal gene 200570 201469 . + . ID=GCA008085315_01399_gene;locus_tag=GCA008085315_01399;gene=prmC contig_19 Pyrodigal CDS 200570 201469 . + 0 ID=GCA008085315_01399;Name=peptide chain release factor N(5)-glutamine methyltransferase;locus_tag=GCA008085315_01399;product=peptide chain release factor N(5)-glutamine methyltransferase;Dbxref=GO:0006412,GO:0008757,GO:0018364;gene=prmC;Parent=GCA008085315_01399_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2890,COG:J,KEGG:K02493,RefSeq:WP_005544681.1,SO:0001217,UniParc:UPI0001B9F6AC,UniRef:UniRef100_UPI0001B9F6AC,UniRef:UniRef50_P45253,UniRef:UniRef90_A0A5D0EMG9;ec_number=2.1.1.297 contig_19 Pyrodigal gene 201479 202333 . + . ID=GCA008085315_01400_gene;locus_tag=GCA008085315_01400;gene=kdsA contig_19 Pyrodigal CDS 201479 202333 . + 0 ID=GCA008085315_01400;Name=3-deoxy-8-phosphooctulonate synthase;locus_tag=GCA008085315_01400;product=3-deoxy-8-phosphooctulonate synthase;Dbxref=GO:0005737,GO:0008676,GO:0019294;gene=kdsA;Parent=GCA008085315_01400_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2877,COG:M,KEGG:K01627,RefSeq:WP_005544680.1,SO:0001217,UniParc:UPI0001B9F6AD,UniRef:UniRef100_UPI0001B9F6AD,UniRef:UniRef50_Q9JZ55,UniRef:UniRef90_B8F521;ec_number=2.5.1.55 contig_19 Pyrodigal gene 202513 203022 . + . ID=GCA008085315_01401_gene;locus_tag=GCA008085315_01401;gene=nlpC contig_19 Pyrodigal CDS 202513 203022 . + 0 ID=GCA008085315_01401;Name=NlpC/P60 domain-containing protein;locus_tag=GCA008085315_01401;product=NlpC/P60 domain-containing protein;gene=nlpC;Parent=GCA008085315_01401_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0791,COG:M,RefSeq:WP_005567774.1,SO:0001217,UniParc:UPI00022AC835,UniRef:UniRef100_UPI00022AC835,UniRef:UniRef50_P45296,UniRef:UniRef90_A0A5D0EM21 contig_19 Pyrodigal gene 203419 203670 . - . ID=GCA008085315_01402_gene;locus_tag=GCA008085315_01402;gene=ycgL contig_19 Pyrodigal CDS 203419 203670 . - 0 ID=GCA008085315_01402;Name=YcgL domain-containing protein ACT75-10365;locus_tag=GCA008085315_01402;product=YcgL domain-containing protein ACT75-10365;gene=ycgL;Parent=GCA008085315_01402_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3100,COG:S,KEGG:K09902,RefSeq:WP_005544676.1,SO:0001217,UniParc:UPI0001B9F6AF,UniRef:UniRef100_UPI0001B9F6AF,UniRef:UniRef50_E6KX56,UniRef:UniRef90_A0A142G2L3 contig_19 Pyrodigal gene 203754 204416 . + . ID=GCA008085315_01403_gene;locus_tag=GCA008085315_01403;gene=minC contig_19 Pyrodigal CDS 203754 204416 . + 0 ID=GCA008085315_01403;Name=septum site-determining protein MinC;locus_tag=GCA008085315_01403;product=septum site-determining protein MinC;Dbxref=GO:0000918,GO:0004857,GO:1901891;gene=minC;Parent=GCA008085315_01403_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0850,COG:D,RefSeq:WP_005544674.1,SO:0001217,UniParc:UPI0001B9F6B0,UniRef:UniRef100_UPI0001B9F6B0,UniRef:UniRef50_P57845,UniRef:UniRef90_E6KX55 contig_19 Pyrodigal gene 204438 204983 . - . ID=GCA008085315_01404_gene;locus_tag=GCA008085315_01404 contig_19 Pyrodigal CDS 204438 204983 . - 0 ID=GCA008085315_01404;Name=Histone;locus_tag=GCA008085315_01404;product=Histone;Parent=GCA008085315_01404_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005544672.1,SO:0001217,UniParc:UPI0001B9F6B1,UniRef:UniRef100_UPI0001B9F6B1,UniRef:UniRef50_A0A142G2L5,UniRef:UniRef90_A0A142G2L5 contig_19 Pyrodigal gene 205207 205674 . - . ID=GCA008085315_01405_gene;locus_tag=GCA008085315_01405;gene=sixA contig_19 Pyrodigal CDS 205207 205674 . - 0 ID=GCA008085315_01405;Name=phosphohistidine phosphatase SixA;locus_tag=GCA008085315_01405;product=phosphohistidine phosphatase SixA;Dbxref=GO:0005737,GO:0036211,GO:0101006;gene=sixA;Parent=GCA008085315_01405_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2062,COG:T,RefSeq:WP_148333974.1,SO:0001217,UniParc:UPI0011DB164B,UniRef:UniRef100_UPI0011DB164B,UniRef:UniRef50_Q9CNI9,UniRef:UniRef90_A0A142G3F0 contig_19 Pyrodigal gene 205687 207024 . - . ID=GCA008085315_01406_gene;locus_tag=GCA008085315_01406;gene=glmM contig_19 Pyrodigal CDS 205687 207024 . - 0 ID=GCA008085315_01406;Name=phosphoglucosamine mutase;locus_tag=GCA008085315_01406;product=phosphoglucosamine mutase;Dbxref=GO:0000287,GO:0005975,GO:0008966,GO:0016868;gene=glmM;Parent=GCA008085315_01406_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1109,COG:G,RefSeq:WP_005544668.1,SO:0001217,UniParc:UPI0001B9F6B3,UniRef:UniRef100_UPI0001B9F6B3,UniRef:UniRef50_A4SXL3,UniRef:UniRef90_E6KX52;ec_number=5.4.2.10 contig_19 Pyrodigal gene 207053 207880 . - . ID=GCA008085315_01407_gene;locus_tag=GCA008085315_01407;gene=folP contig_19 Pyrodigal CDS 207053 207880 . - 0 ID=GCA008085315_01407;Name=dihydropteroate synthase;locus_tag=GCA008085315_01407;product=dihydropteroate synthase;Dbxref=GO:0004156,GO:0009396;gene=folP;Parent=GCA008085315_01407_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0294,COG:H,KEGG:K00796,RefSeq:WP_005544667.1,SO:0001217,UniParc:UPI0001B9F6B4,UniRef:UniRef100_UPI0001B9F6B4,UniRef:UniRef50_A0A450V4M3,UniRef:UniRef90_A0A142G2L7;ec_number=2.5.1.15 contig_19 Pyrodigal gene 208050 209084 . - . ID=GCA008085315_01408_gene;locus_tag=GCA008085315_01408;gene=dinB contig_19 Pyrodigal CDS 208050 209084 . - 0 ID=GCA008085315_01408;Name=DNA polymerase IV;locus_tag=GCA008085315_01408;product=DNA polymerase IV;Dbxref=GO:0003684,GO:0003887,GO:0006281;gene=dinB;Parent=GCA008085315_01408_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0389,COG:L,RefSeq:WP_233439046.1,SO:0001217,UniParc:UPI001EE9D001,UniRef:UniRef100_UPI001EE9D001,UniRef:UniRef50_Q8ZBZ9,UniRef:UniRef90_A0A5D0KWA1;ec_number=2.7.7.7 contig_19 Pyrodigal gene 209220 209480 . + . ID=GCA008085315_01409_gene;locus_tag=GCA008085315_01409 contig_19 Pyrodigal CDS 209220 209480 . + 0 ID=GCA008085315_01409;Name=Integrase catalytic domain-containing protein;locus_tag=GCA008085315_01409;product=Integrase catalytic domain-containing protein;Parent=GCA008085315_01409_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A255SZX7 contig_19 Pyrodigal gene 209824 210273 . + . ID=GCA008085315_01410_gene;locus_tag=GCA008085315_01410 contig_19 Pyrodigal CDS 209824 210273 . + 0 ID=GCA008085315_01410;Name=5-methylaminomethyl-2-thiouridine methyltransferase;locus_tag=GCA008085315_01410;product=5-methylaminomethyl-2-thiouridine methyltransferase;Parent=GCA008085315_01410_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005544663.1,SO:0001217,UniParc:UPI0001B9F6B7,UniRef:UniRef100_A0A142G2L9,UniRef:UniRef50_P44249,UniRef:UniRef90_G4A5Y3 contig_19 Pyrodigal gene 210546 210719 . - . ID=GCA008085315_01411_gene;locus_tag=GCA008085315_01411 contig_19 Pyrodigal CDS 210546 210719 . - 0 ID=GCA008085315_01411;Name=Transposase;locus_tag=GCA008085315_01411;product=Transposase;Parent=GCA008085315_01411_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_F0ETY5 contig_19 Pyrodigal gene 211005 212471 . - . ID=GCA008085315_01412_gene;locus_tag=GCA008085315_01412;gene=guaB contig_19 Pyrodigal CDS 211005 212471 . - 0 ID=GCA008085315_01412;Name=IMP dehydrogenase;locus_tag=GCA008085315_01412;product=IMP dehydrogenase;Dbxref=GO:0000166,GO:0003938,GO:0006164,GO:0006177,GO:0006183,GO:0046872;gene=guaB;Parent=GCA008085315_01412_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2524,COG:K,KEGG:K00088,RefSeq:WP_005548590.1,SO:0001217,UniParc:UPI0001B9F6B9,UniRef:UniRef100_UPI0001B9F6B9,UniRef:UniRef50_P0ADG7,UniRef:UniRef90_Q9L6B7;ec_number=1.1.1.205 contig_19 Pyrodigal gene 212613 213545 . + . ID=GCA008085315_01413_gene;locus_tag=GCA008085315_01413;gene=birA contig_19 Pyrodigal CDS 212613 213545 . + 0 ID=GCA008085315_01413;Name=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;locus_tag=GCA008085315_01413;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;Dbxref=GO:0004077,GO:0006355,GO:0036211;gene=birA;Parent=GCA008085315_01413_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0340,COG:H,KEGG:K03524,RefSeq:WP_233439047.1,SO:0001217,UniParc:UPI001EEC6B32,UniRef:UniRef100_UPI001EEC6B32,UniRef:UniRef50_P46363,UniRef:UniRef90_A0AAC8Y0I6;ec_number=6.3.4.15 contig_19 Pyrodigal gene 213632 213835 . + . ID=GCA008085315_01414_gene;locus_tag=GCA008085315_01414 contig_19 Pyrodigal CDS 213632 213835 . + 0 ID=GCA008085315_01414;Name=Glycine zipper 2TM domain-containing protein;locus_tag=GCA008085315_01414;product=Glycine zipper 2TM domain-containing protein;Parent=GCA008085315_01414_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005548595.1,SO:0001217,UniParc:UPI0001B9F6BB,UniRef:UniRef100_UPI0001B9F6BB,UniRef:UniRef50_A3N2T1,UniRef:UniRef90_G4A5Y6 ##sequence-region contig_20 1 187618 contig_20 Bakta region 1 187618 . + . ID=contig_20;Name=contig_20 contig_20 Pyrodigal gene 148 1782 . - . ID=GCA008085315_01415_gene;locus_tag=GCA008085315_01415;gene=pyrG contig_20 Pyrodigal CDS 148 1782 . - 0 ID=GCA008085315_01415;Name=glutamine hydrolyzing CTP synthase;locus_tag=GCA008085315_01415;product=glutamine hydrolyzing CTP synthase;Dbxref=GO:0003883,GO:0004359,GO:0005524,GO:0005829,GO:0006221,GO:0019856,GO:0042802,GO:0044210,GO:0046872;gene=pyrG;Parent=GCA008085315_01415_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0504,COG:F,KEGG:K01937,RefSeq:WP_005545189.1,SO:0001217,UniParc:UPI0001B9F1AD,UniRef:UniRef100_UPI0001B9F1AD,UniRef:UniRef50_P0A7E5,UniRef:UniRef90_Q65VZ8;ec_number=6.3.4.2 contig_20 Pyrodigal gene 2010 3311 . + . ID=GCA008085315_01416_gene;locus_tag=GCA008085315_01416;gene=brnQ contig_20 Pyrodigal CDS 2010 3311 . + 0 ID=GCA008085315_01416;Name=branched-chain amino acid transport system II carrier protein;locus_tag=GCA008085315_01416;product=branched-chain amino acid transport system II carrier protein;Dbxref=GO:0015658,GO:0015803,GO:0016020;gene=brnQ;Parent=GCA008085315_01416_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1114,COG:E,KEGG:K03311,SO:0001217,UniRef:UniRef50_P71345,UniRef:UniRef90_A0A142G0R0 contig_20 Pyrodigal gene 3421 3621 . + . ID=GCA008085315_01417_gene;locus_tag=GCA008085315_01417 contig_20 Pyrodigal CDS 3421 3621 . + 0 ID=GCA008085315_01417;Name=phosphoribosyl-AMP cyclohydrolase;locus_tag=GCA008085315_01417;product=phosphoribosyl-AMP cyclohydrolase;Parent=GCA008085315_01417_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A5D0EJ90,UniRef:UniRef90_A0A5D0EJ90 contig_20 Pyrodigal gene 3808 4392 . - . ID=GCA008085315_01418_gene;locus_tag=GCA008085315_01418;gene=nfuA contig_20 Pyrodigal CDS 3808 4392 . - 0 ID=GCA008085315_01418;Name=Fe-S biogenesis protein NfuA;locus_tag=GCA008085315_01418;product=Fe-S biogenesis protein NfuA;Dbxref=GO:0016226,GO:0051539,GO:0051604;gene=nfuA;Parent=GCA008085315_01418_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0694,COG:O,RefSeq:WP_005539159.1,SO:0001217,UniParc:UPI0001CA75F5,UniRef:UniRef100_A0A142G0Q8,UniRef:UniRef50_Q5E1Z0,UniRef:UniRef90_A0A142G0Q8 contig_20 Pyrodigal gene 4509 5195 . - . ID=GCA008085315_01419_gene;locus_tag=GCA008085315_01419;gene=comF contig_20 Pyrodigal CDS 4509 5195 . - 0 ID=GCA008085315_01419;Name=Competence protein ComF;locus_tag=GCA008085315_01419;product=Competence protein ComF;gene=comF;Parent=GCA008085315_01419_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1040,COG:R,KEGG:K02242,RefSeq:WP_148320929.1,SO:0001217,UniParc:UPI0011DAEE21,UniRef:UniRef100_UPI0011DAEE21,UniRef:UniRef50_P31773,UniRef:UniRef90_A0A142G0Q7 contig_20 Pyrodigal gene 5341 6153 . + . ID=GCA008085315_01420_gene;locus_tag=GCA008085315_01420;gene=cof contig_20 Pyrodigal CDS 5341 6153 . + 0 ID=GCA008085315_01420;Name=Hydrolase;locus_tag=GCA008085315_01420;product=Hydrolase;gene=cof;Parent=GCA008085315_01420_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0561,COG:HR,RefSeq:WP_148320930.1,SO:0001217,UniParc:UPI0011D66475,UniRef:UniRef100_UPI0011D66475,UniRef:UniRef50_Q9CKQ1,UniRef:UniRef90_A0A5D0EJ59 contig_20 Pyrodigal gene 6337 7449 . + . ID=GCA008085315_01421_gene;locus_tag=GCA008085315_01421;gene=asd contig_20 Pyrodigal CDS 6337 7449 . + 0 ID=GCA008085315_01421;Name=aspartate-semialdehyde dehydrogenase;locus_tag=GCA008085315_01421;product=aspartate-semialdehyde dehydrogenase;Dbxref=GO:0004073,GO:0009086,GO:0009088,GO:0009089,GO:0009097,GO:0050661;gene=asd;Parent=GCA008085315_01421_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0136,COG:E,KEGG:K00133,RefSeq:WP_005545176.1,SO:0001217,UniParc:UPI0001B9F1A7,UniRef:UniRef100_UPI0001B9F1A7,UniRef:UniRef50_P44801,UniRef:UniRef90_E6KZZ7;ec_number=1.2.1.11 contig_20 Pyrodigal gene 7522 8103 . - . ID=GCA008085315_01422_gene;locus_tag=GCA008085315_01422;gene=comEA contig_20 Pyrodigal CDS 7522 8103 . - 0 ID=GCA008085315_01422;Name=Helix-hairpin-helix domain-containing protein;locus_tag=GCA008085315_01422;product=Helix-hairpin-helix domain-containing protein;gene=comEA;Parent=GCA008085315_01422_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1555,COG:L,RefSeq:WP_005568669.1,SO:0001217,UniParc:UPI0001B9F1A6,UniRef:UniRef100_UPI00022ACDA1,UniRef:UniRef50_A0AAP7GWR8,UniRef:UniRef90_A0A5D0EK14 contig_20 Pyrodigal gene 8368 10938 . + . ID=GCA008085315_01423_gene;locus_tag=GCA008085315_01423;gene=clpB contig_20 Pyrodigal CDS 8368 10938 . + 0 ID=GCA008085315_01423;Name=ATP-dependent chaperone ClpB;locus_tag=GCA008085315_01423;product=ATP-dependent chaperone ClpB;Dbxref=GO:0005524,GO:0009408,GO:0016887,GO:0042026;gene=clpB;Parent=GCA008085315_01423_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0542,COG:O,RefSeq:WP_005545173.1,SO:0001217,UniParc:UPI0001B9F1A5,UniRef:UniRef100_UPI0001B9F1A5,UniRef:UniRef50_Q6LMY0,UniRef:UniRef90_A0A336NDW7 contig_20 Pyrodigal gene 11040 11558 . - . ID=GCA008085315_01424_gene;locus_tag=GCA008085315_01424 contig_20 Pyrodigal CDS 11040 11558 . - 0 ID=GCA008085315_01424;Name=Surface-adhesin protein;locus_tag=GCA008085315_01424;product=Surface-adhesin protein;Parent=GCA008085315_01424_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_G4A8I6,UniRef:UniRef90_G4A8I6 contig_20 Pyrodigal gene 11723 12751 . + . ID=GCA008085315_01425_gene;locus_tag=GCA008085315_01425;gene=purM contig_20 Pyrodigal CDS 11723 12751 . + 0 ID=GCA008085315_01425;Name=Phosphoribosylformylglycinamidine cyclo-ligase;locus_tag=GCA008085315_01425;product=Phosphoribosylformylglycinamidine cyclo-ligase;gene=purM;Parent=GCA008085315_01425_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0150,COG:F,RefSeq:WP_148320932.1,SO:0001217,UniParc:UPI0011D452FF,UniRef:UniRef100_UPI0011D452FF,UniRef:UniRef50_Q1D8V5,UniRef:UniRef90_A0A5D0ELG8 contig_20 Pyrodigal gene 13009 13833 . + . ID=GCA008085315_01426_gene;locus_tag=GCA008085315_01426;gene=dapF contig_20 Pyrodigal CDS 13009 13833 . + 0 ID=GCA008085315_01426;Name=diaminopimelate epimerase;locus_tag=GCA008085315_01426;product=diaminopimelate epimerase;Dbxref=GO:0008837,GO:0009089;gene=dapF;Parent=GCA008085315_01426_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0253,COG:E,KEGG:K01778,RefSeq:WP_005545164.1,SO:0001217,UniParc:UPI0001B9F153,UniRef:UniRef100_UPI0001B9F153,UniRef:UniRef50_P0A6K1,UniRef:UniRef90_A0A142G0P9;ec_number=5.1.1.7 contig_20 Pyrodigal gene 13843 14733 . + . ID=GCA008085315_01427_gene;locus_tag=GCA008085315_01427;gene=xerC contig_20 Pyrodigal CDS 13843 14733 . + 0 ID=GCA008085315_01427;Name=tyrosine recombinase XerC;locus_tag=GCA008085315_01427;product=tyrosine recombinase XerC;Dbxref=GO:0003677,GO:0006310,GO:0007059,GO:0015074,GO:0051301;gene=xerC;Parent=GCA008085315_01427_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4973,COG:L,RefSeq:WP_148333975.1,SO:0001217,UniParc:UPI0011DA798C,UniRef:UniRef100_UPI0011DA798C,UniRef:UniRef50_P0A8P6,UniRef:UniRef90_A0A142G0P8 contig_20 Pyrodigal gene 14747 15460 . + . ID=GCA008085315_01428_gene;locus_tag=GCA008085315_01428;gene=yigB contig_20 Pyrodigal CDS 14747 15460 . + 0 ID=GCA008085315_01428;Name=HAD-IA family hydrolase;locus_tag=GCA008085315_01428;product=HAD-IA family hydrolase;gene=yigB;Parent=GCA008085315_01428_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1011,COG:H,RefSeq:WP_148333976.1,SO:0001217,UniParc:UPI0011D50536,UniRef:UniRef100_UPI0011D50536,UniRef:UniRef50_E6KVG6,UniRef:UniRef90_A0A5D0EJF9 contig_20 Pyrodigal gene 15561 15986 . - . ID=GCA008085315_01429_gene;locus_tag=GCA008085315_01429 contig_20 Pyrodigal CDS 15561 15986 . - 0 ID=GCA008085315_01429;Name=Excinuclease ABC subunit A;locus_tag=GCA008085315_01429;product=Excinuclease ABC subunit A;Parent=GCA008085315_01429_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005544252.1,SO:0001217,UniParc:UPI0001B9F150,UniRef:UniRef100_A0A142G0P6,UniRef:UniRef50_K0G6V4,UniRef:UniRef90_A0A142G0P6 contig_20 Pyrodigal gene 16014 16337 . + . ID=GCA008085315_01430_gene;locus_tag=GCA008085315_01430 contig_20 Pyrodigal CDS 16014 16337 . + 0 ID=GCA008085315_01430;Name=hypothetical protein;locus_tag=GCA008085315_01430;product=hypothetical protein;Parent=GCA008085315_01430_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005545157.1,SO:0001217,UniParc:UPI0001B9F14F,UniRef:UniRef100_UPI0001B9F14F,UniRef:UniRef50_A0A142G0P5,UniRef:UniRef90_A0A142G0P5 contig_20 Pyrodigal gene 16367 17110 . + . ID=GCA008085315_01431_gene;locus_tag=GCA008085315_01431 contig_20 Pyrodigal CDS 16367 17110 . + 0 ID=GCA008085315_01431;Name=Beta-ketoacyl synthase-like N-terminal domain-containing protein;locus_tag=GCA008085315_01431;product=Beta-ketoacyl synthase-like N-terminal domain-containing protein;Parent=GCA008085315_01431_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005545155.1,SO:0001217,UniParc:UPI0001B9F14E,UniRef:UniRef100_UPI0001B9F14E,UniRef:UniRef50_K0FZR3,UniRef:UniRef90_G4A8J4 contig_20 Pyrodigal gene 17095 17883 . + . ID=GCA008085315_01432_gene;locus_tag=GCA008085315_01432;gene=plsC contig_20 Pyrodigal CDS 17095 17883 . + 0 ID=GCA008085315_01432;Name=1-acyl-sn-glycerol-3-phosphate acyltransferase;locus_tag=GCA008085315_01432;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;gene=plsC;Parent=GCA008085315_01432_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0204,COG:I,RefSeq:WP_148320933.1,SO:0001217,UniParc:UPI0011D91190,UniRef:UniRef100_UPI0011D91190,UniRef:UniRef50_V9HLY8,UniRef:UniRef90_A0A142G0P3 contig_20 Pyrodigal gene 17861 18124 . + . ID=GCA008085315_01433_gene;locus_tag=GCA008085315_01433;gene=acpP contig_20 Pyrodigal CDS 17861 18124 . + 0 ID=GCA008085315_01433;Name=Acyl carrier protein;locus_tag=GCA008085315_01433;product=Acyl carrier protein;gene=acpP;Parent=GCA008085315_01433_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0236,COG:I,RefSeq:WP_148320934.1,SO:0001217,UniParc:UPI0011DA5219,UniRef:UniRef100_UPI0011DA5219,UniRef:UniRef50_V8CEC6,UniRef:UniRef90_A0A5D0EMB7 contig_20 Pyrodigal gene 18127 18378 . + . ID=GCA008085315_01434_gene;locus_tag=GCA008085315_01434;gene=acpP contig_20 Pyrodigal CDS 18127 18378 . + 0 ID=GCA008085315_01434;Name=acyl carrier protein;locus_tag=GCA008085315_01434;product=acyl carrier protein;Dbxref=GO:0006633;gene=acpP;Parent=GCA008085315_01434_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0236,COG:I,RefSeq:WP_005545149.1,SO:0001217,UniParc:UPI0001B9F14B,UniRef:UniRef100_UPI0001B9F14B,UniRef:UniRef50_A0A2A5RC84,UniRef:UniRef90_E6KVH1 contig_20 Pyrodigal gene 18378 20045 . + . ID=GCA008085315_01435_gene;locus_tag=GCA008085315_01435;gene=fabA contig_20 Pyrodigal CDS 18378 20045 . + 0 ID=GCA008085315_01435;Name=AMP-binding protein;locus_tag=GCA008085315_01435;product=AMP-binding protein;gene=fabA;Parent=GCA008085315_01435_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0764,COG:I,RefSeq:WP_148333977.1,SO:0001217,UniParc:UPI0011DB58F5,UniRef:UniRef100_UPI0011DB58F5,UniRef:UniRef50_A0A379AZP3,UniRef:UniRef90_A0A5D0ELM4 contig_20 Pyrodigal gene 20071 20616 . + . ID=GCA008085315_01436_gene;locus_tag=GCA008085315_01436 contig_20 Pyrodigal CDS 20071 20616 . + 0 ID=GCA008085315_01436;Name=DNA gyrase subunit B;locus_tag=GCA008085315_01436;product=DNA gyrase subunit B;Parent=GCA008085315_01436_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4648,COG:S,RefSeq:WP_005589202.1,SO:0001217,UniParc:UPI0001B9F149,UniRef:UniRef100_UPI0001B9F149,UniRef:UniRef50_A0A5D0EKR1,UniRef:UniRef90_A0A5D0EKR1 contig_20 Pyrodigal gene 20613 21974 . + . ID=GCA008085315_01437_gene;locus_tag=GCA008085315_01437;gene=acs contig_20 Pyrodigal CDS 20613 21974 . + 0 ID=GCA008085315_01437;Name=AMP-binding protein;locus_tag=GCA008085315_01437;product=AMP-binding protein;gene=acs;Parent=GCA008085315_01437_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0365,COG:I,RefSeq:WP_005545142.1,SO:0001217,UniParc:UPI0001B9F148,UniRef:UniRef100_UPI0001B9F148,UniRef:UniRef50_A0A448TVS1,UniRef:UniRef90_A0A5D0EK28 contig_20 Pyrodigal gene 21974 22696 . + . ID=GCA008085315_01438_gene;locus_tag=GCA008085315_01438;gene=wcaA contig_20 Pyrodigal CDS 21974 22696 . + 0 ID=GCA008085315_01438;Name=Glycosyl transferase;locus_tag=GCA008085315_01438;product=Glycosyl transferase;gene=wcaA;Parent=GCA008085315_01438_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0463,COG:M,RefSeq:WP_005575740.1,SO:0001217,UniParc:UPI00022ACDA9,UniRef:UniRef100_UPI00022ACDA9,UniRef:UniRef50_U6Q2A2,UniRef:UniRef90_A0A142G0N7 contig_20 Pyrodigal gene 22693 23619 . + . ID=GCA008085315_01439_gene;locus_tag=GCA008085315_01439 contig_20 Pyrodigal CDS 22693 23619 . + 0 ID=GCA008085315_01439;Name=Glycosyl transferase family 2;locus_tag=GCA008085315_01439;product=Glycosyl transferase family 2;Parent=GCA008085315_01439_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4261,COG:R,RefSeq:WP_005545138.1,SO:0001217,UniParc:UPI0001B9F146,UniRef:UniRef100_UPI0001B9F146,UniRef:UniRef50_U6Q3Y8,UniRef:UniRef90_A0A142G0N6 contig_20 Pyrodigal gene 23616 24062 . + . ID=GCA008085315_01440_gene;locus_tag=GCA008085315_01440;gene=fadM contig_20 Pyrodigal CDS 23616 24062 . + 0 ID=GCA008085315_01440;Name=Conserved thioesterase;locus_tag=GCA008085315_01440;product=Conserved thioesterase;gene=fadM;Parent=GCA008085315_01440_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0824,COG:I,RefSeq:WP_005575742.1,SO:0001217,UniParc:UPI0001B9F145,UniRef:UniRef100_UPI0001B9F145,UniRef:UniRef50_A0A2N9X4S9,UniRef:UniRef90_G4A8K4 contig_20 Pyrodigal gene 24059 24643 . + . ID=GCA008085315_01441_gene;locus_tag=GCA008085315_01441;gene=lolA contig_20 Pyrodigal CDS 24059 24643 . + 0 ID=GCA008085315_01441;Name=Outer membrane lipoprotein carrier protein LolA;locus_tag=GCA008085315_01441;product=Outer membrane lipoprotein carrier protein LolA;gene=lolA;Parent=GCA008085315_01441_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2834,COG:M,KEGG:K03634,RefSeq:WP_005545134.1,SO:0001217,UniParc:UPI0001B9F144,UniRef:UniRef100_UPI0001B9F144,UniRef:UniRef50_A0A1B8QWA1,UniRef:UniRef90_A0A5D0KTN9 contig_20 Pyrodigal gene 24650 26923 . + . ID=GCA008085315_01442_gene;locus_tag=GCA008085315_01442 contig_20 Pyrodigal CDS 24650 26923 . + 0 ID=GCA008085315_01442;Name=SSD domain-containing protein;locus_tag=GCA008085315_01442;product=SSD domain-containing protein;Parent=GCA008085315_01442_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4258,COG:R,RefSeq:WP_148321357.1,SO:0001217,UniParc:UPI0011D6F0F5,UniRef:UniRef100_UPI0011D6F0F5,UniRef:UniRef50_A0A1V3JDS5,UniRef:UniRef90_A0A5D0EKB0 contig_20 Pyrodigal gene 27053 27532 . + . ID=GCA008085315_01443_gene;locus_tag=GCA008085315_01443 contig_20 Pyrodigal CDS 27053 27532 . + 0 ID=GCA008085315_01443;Name=Lipoprotein;locus_tag=GCA008085315_01443;product=Lipoprotein;Parent=GCA008085315_01443_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005569645.1,SO:0001217,UniParc:UPI00022ACBB2,UniRef:UniRef100_UPI00022ACBB2,UniRef:UniRef50_E6KVI0,UniRef:UniRef90_A0A142G0N2 contig_20 Pyrodigal gene 27541 28764 . + . ID=GCA008085315_01444_gene;locus_tag=GCA008085315_01444;gene=fabB contig_20 Pyrodigal CDS 27541 28764 . + 0 ID=GCA008085315_01444;Name=3-oxoacyl-ACP synthase;locus_tag=GCA008085315_01444;product=3-oxoacyl-ACP synthase;gene=fabB;Parent=GCA008085315_01444_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0304,COG:IQ,RefSeq:WP_005568642.1,SO:0001217,UniParc:UPI00022AC87B,UniRef:UniRef100_UPI00022AC87B,UniRef:UniRef50_A0A377IXQ7,UniRef:UniRef90_A0A142G0N1 contig_20 Pyrodigal gene 28757 29200 . + . ID=GCA008085315_01445_gene;locus_tag=GCA008085315_01445 contig_20 Pyrodigal CDS 28757 29200 . + 0 ID=GCA008085315_01445;Name=Dehydratase;locus_tag=GCA008085315_01445;product=Dehydratase;Parent=GCA008085315_01445_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4706,COG:I,RefSeq:WP_005545126.1,SO:0001217,UniParc:UPI0001B9F140,UniRef:UniRef100_UPI0001B9F140,UniRef:UniRef50_A0A336N4G6,UniRef:UniRef90_A0A142G0N0 contig_20 Pyrodigal gene 29250 29978 . + . ID=GCA008085315_01446_gene;locus_tag=GCA008085315_01446;gene=fabG contig_20 Pyrodigal CDS 29250 29978 . + 0 ID=GCA008085315_01446;Name=3-oxoacyl-ACP reductase FabG;locus_tag=GCA008085315_01446;product=3-oxoacyl-ACP reductase FabG;Dbxref=GO:0004316,GO:0006633,GO:0016491;gene=fabG;Parent=GCA008085315_01446_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1028,COG:I,RefSeq:WP_005545124.1,SO:0001217,UniParc:UPI000012A456,UniRef:UniRef100_P70720,UniRef:UniRef50_P70720,UniRef:UniRef90_P70720;ec_number=1.1.1.100 contig_20 Pyrodigal gene 29998 31242 . + . ID=GCA008085315_01447_gene;locus_tag=GCA008085315_01447;gene=fabB contig_20 Pyrodigal CDS 29998 31242 . + 0 ID=GCA008085315_01447;Name=beta-ketoacyl-ACP synthase;locus_tag=GCA008085315_01447;product=beta-ketoacyl-ACP synthase;Dbxref=GO:0004315,GO:0006633;gene=fabB;Parent=GCA008085315_01447_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0304,COG:IQ,RefSeq:WP_005545121.1,SO:0001217,UniParc:UPI00000B59A8,UniRef:UniRef100_P70719,UniRef:UniRef50_A0A379I698,UniRef:UniRef90_E6KVI4;ec_number=2.3.1.179 contig_20 Pyrodigal gene 31653 33107 . - . ID=GCA008085315_01448_gene;locus_tag=GCA008085315_01448;gene=gnd contig_20 Pyrodigal CDS 31653 33107 . - 0 ID=GCA008085315_01448;Name=decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase;locus_tag=GCA008085315_01448;product=decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase;Dbxref=GO:0004616,GO:0005737,GO:0006098,GO:0016054,GO:0019521,GO:0050661;gene=gnd;Parent=GCA008085315_01448_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0362,COG:G,KEGG:K00033,RefSeq:WP_005545119.1,SO:0001217,UniParc:UPI0000124F61,UniRef:UniRef100_P70718,UniRef:UniRef50_P41572,UniRef:UniRef90_P70718;ec_number=1.1.1.44 contig_20 Infernal gene 33367 33466 . + . ID=GCA008085315_01449_gene;locus_tag=GCA008085315_01449;gene=AaHKsRNA22 contig_20 Infernal ncRNA 33367 33466 8.1e-09 + . ID=GCA008085315_01449;Name=Aggregatibacter sRNA 22;locus_tag=GCA008085315_01449;product=Aggregatibacter sRNA 22;Dbxref=RFAM:RF02902;Parent=GCA008085315_01449_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02902 contig_20 Pyrodigal gene 33663 34121 . - . ID=GCA008085315_01450_gene;locus_tag=GCA008085315_01450;gene=vapD contig_20 Pyrodigal CDS 33663 34121 . - 0 ID=GCA008085315_01450;Name=Virulence factor;locus_tag=GCA008085315_01450;product=Virulence factor;gene=vapD;Parent=GCA008085315_01450_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3309,COG:V,RefSeq:WP_005541228.1,SO:0001217,UniParc:UPI0001B9F13E,UniRef:UniRef100_A0A142FZE3,UniRef:UniRef50_A0A1V3JTW2,UniRef:UniRef90_A0A142FZE3 contig_20 Pyrodigal gene 34201 34455 . - . ID=GCA008085315_01451_gene;locus_tag=GCA008085315_01451 contig_20 Pyrodigal CDS 34201 34455 . - 0 ID=GCA008085315_01451;Name=Glutaredoxin-related protein;locus_tag=GCA008085315_01451;product=Glutaredoxin-related protein;Parent=GCA008085315_01451_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4545,COG:O,RefSeq:WP_005545114.1,SO:0001217,UniParc:UPI0001B9F13D,UniRef:UniRef100_UPI0001B9F13D,UniRef:UniRef50_P44076,UniRef:UniRef90_G4A5B8 contig_20 Pyrodigal gene 34468 35160 . - . ID=GCA008085315_01452_gene;locus_tag=GCA008085315_01452;gene=racX contig_20 Pyrodigal CDS 34468 35160 . - 0 ID=GCA008085315_01452;Name=aspartate/glutamate racemase family protein;locus_tag=GCA008085315_01452;product=aspartate/glutamate racemase family protein;gene=racX;Parent=GCA008085315_01452_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1794,COG:M,RefSeq:WP_014167573.1,SO:0001217,UniParc:UPI00022BFC3D,UniRef:UniRef100_UPI00022BFC3D,UniRef:UniRef50_F0ERM1,UniRef:UniRef90_UPI001E5B56C0 contig_20 Pyrodigal gene 35275 35703 . - . ID=GCA008085315_01453_gene;locus_tag=GCA008085315_01453 contig_20 Pyrodigal CDS 35275 35703 . - 0 ID=GCA008085315_01453;Name=hypothetical protein;locus_tag=GCA008085315_01453;product=hypothetical protein;Parent=GCA008085315_01453_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005587967.1,SO:0001217,UniParc:UPI0001B9F13B,UniRef:UniRef100_UPI0001B9F13B,UniRef:UniRef50_A3N1V6,UniRef:UniRef90_G4A5C0 contig_20 Pyrodigal gene 36017 36715 . - . ID=GCA008085315_01454_gene;locus_tag=GCA008085315_01454;gene=pgl contig_20 Pyrodigal CDS 36017 36715 . - 0 ID=GCA008085315_01454;Name=6-phosphogluconolactonase;locus_tag=GCA008085315_01454;product=6-phosphogluconolactonase;Dbxref=GO:0005829,GO:0005975,GO:0009051,GO:0017057;gene=pgl;Parent=GCA008085315_01454_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0363,COG:G,KEGG:K01057,RefSeq:WP_148320936.1,SO:0001217,UniParc:UPI0011D62BA8,UniRef:UniRef100_UPI0011D62BA8,UniRef:UniRef50_Q57039,UniRef:UniRef90_Q57039;ec_number=3.1.1.31 contig_20 Infernal gene 36846 36942 . - . ID=GCA008085315_01455_gene;locus_tag=GCA008085315_01455;gene=AaHKsRNA22 contig_20 Infernal ncRNA 36846 36942 4.9e-11 - . ID=GCA008085315_01455;Name=Aggregatibacter sRNA 22;locus_tag=GCA008085315_01455;product=Aggregatibacter sRNA 22;Dbxref=RFAM:RF02902;Parent=GCA008085315_01455_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02902 contig_20 Pyrodigal gene 36968 38527 . - . ID=GCA008085315_01456_gene;locus_tag=GCA008085315_01456;gene=zwf contig_20 Pyrodigal CDS 36968 38527 . - 0 ID=GCA008085315_01456;Name=glucose-6-phosphate dehydrogenase;locus_tag=GCA008085315_01456;product=glucose-6-phosphate dehydrogenase;Dbxref=GO:0004345,GO:0005829,GO:0006006,GO:0006098,GO:0009051,GO:0016614,GO:0050661;gene=zwf;Parent=GCA008085315_01456_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0364,COG:G,KEGG:K00036,SO:0001217,UniRef:UniRef50_P44311,UniRef:UniRef90_P77809;ec_number=1.1.1.49 contig_20 Pyrodigal gene 38550 39359 . - . ID=GCA008085315_01457_gene;locus_tag=GCA008085315_01457;gene=cysQ contig_20 Pyrodigal CDS 38550 39359 . - 0 ID=GCA008085315_01457;Name=3'(2')%2C5'-bisphosphate nucleotidase CysQ;locus_tag=GCA008085315_01457;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;Dbxref=GO:0000103,GO:0000287,GO:0005886,GO:0006790,GO:0008441,GO:0046854,GO:0050427;gene=cysQ;Parent=GCA008085315_01457_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1218,COG:P,KEGG:K01082,RefSeq:WP_005545107.1,SO:0001217,UniParc:UPI0000128D3B,UniRef:UniRef100_P70714,UniRef:UniRef50_P44332,UniRef:UniRef90_P70714;ec_number=3.1.3.7 contig_20 Pyrodigal gene 39397 39825 . - . ID=GCA008085315_01458_gene;locus_tag=GCA008085315_01458 contig_20 Pyrodigal CDS 39397 39825 . - 0 ID=GCA008085315_01458;Name=Phosphoethanolamine transferase N-terminal domain-containing protein;locus_tag=GCA008085315_01458;product=Phosphoethanolamine transferase N-terminal domain-containing protein;Parent=GCA008085315_01458_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005545105.1,SO:0001217,UniParc:UPI0001B9F137,UniRef:UniRef100_UPI0001B9F137,UniRef:UniRef50_U1R665,UniRef:UniRef90_A0A5D0EJE8 contig_20 Pyrodigal gene 39887 41893 . - . ID=GCA008085315_01459_gene;locus_tag=GCA008085315_01459;gene=oPT contig_20 Pyrodigal CDS 39887 41893 . - 0 ID=GCA008085315_01459;Name=OPT family oligopeptide transporter;locus_tag=GCA008085315_01459;product=OPT family oligopeptide transporter;Dbxref=GO:0006857,GO:0016020,GO:0035673;gene=oPT;Parent=GCA008085315_01459_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1297,COG:R,RefSeq:WP_148320937.1,SO:0001217,UniParc:UPI0011D91FDB,UniRef:UniRef100_UPI0011D91FDB,UniRef:UniRef50_P44016,UniRef:UniRef90_A0AAC9AHV9 contig_20 Pyrodigal gene 42262 42888 . + . ID=GCA008085315_01460_gene;locus_tag=GCA008085315_01460;gene=ykgB contig_20 Pyrodigal CDS 42262 42888 . + 0 ID=GCA008085315_01460;Name=Inner membrane protein YkgB;locus_tag=GCA008085315_01460;product=Inner membrane protein YkgB;gene=ykgB;Parent=GCA008085315_01460_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3059,COG:V,KEGG:K21741,RefSeq:WP_005545101.1,SO:0001217,UniParc:UPI0001B9F135,UniRef:UniRef100_UPI0001B9F135,UniRef:UniRef50_P44577,UniRef:UniRef90_G4A5C6 contig_20 Pyrodigal gene 42959 43840 . + . ID=GCA008085315_01461_gene;locus_tag=GCA008085315_01461;gene=araC contig_20 Pyrodigal CDS 42959 43840 . + 0 ID=GCA008085315_01461;Name=AraC family transcriptional regulator;locus_tag=GCA008085315_01461;product=AraC family transcriptional regulator;gene=araC;Parent=GCA008085315_01461_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K18991,RefSeq:WP_005545098.1,SO:0001217,UniParc:UPI0001B9F134,UniRef:UniRef100_UPI0001B9F134,UniRef:UniRef50_A0A5D0EKB5,UniRef:UniRef90_A0A5D0EKB5 contig_20 Pyrodigal gene 43845 44393 . - . ID=GCA008085315_01462_gene;locus_tag=GCA008085315_01462;gene=nudE contig_20 Pyrodigal CDS 43845 44393 . - 0 ID=GCA008085315_01462;Name=ADP compounds hydrolase NudE;locus_tag=GCA008085315_01462;product=ADP compounds hydrolase NudE;Dbxref=GO:0016787;gene=nudE;Parent=GCA008085315_01462_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1051,COG:F,RefSeq:WP_005545096.1,SO:0001217,UniParc:UPI00022AC877,UniRef:UniRef100_UPI00022AC877,UniRef:UniRef50_A0A1B7JTQ0,UniRef:UniRef90_A0A5D0EKX0;ec_number=3.6.1.- contig_20 Pyrodigal gene 44474 45133 . + . ID=GCA008085315_01463_gene;locus_tag=GCA008085315_01463;gene=yrfG contig_20 Pyrodigal CDS 44474 45133 . + 0 ID=GCA008085315_01463;Name=GMP/IMP nucleotidase;locus_tag=GCA008085315_01463;product=GMP/IMP nucleotidase;gene=yrfG;Parent=GCA008085315_01463_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1011,COG:H,KEGG:K20881,RefSeq:WP_005545094.1,SO:0001217,UniParc:UPI0001B9F132,UniRef:UniRef100_UPI0001B9F132,UniRef:UniRef50_A0A142FZD5,UniRef:UniRef90_A0A142FZD5;ec_number=3.1.3.5 contig_20 Pyrodigal gene 45146 45562 . + . ID=GCA008085315_01464_gene;locus_tag=GCA008085315_01464;gene=hslR contig_20 Pyrodigal CDS 45146 45562 . + 0 ID=GCA008085315_01464;Name=ribosome-associated heat shock protein Hsp15;locus_tag=GCA008085315_01464;product=ribosome-associated heat shock protein Hsp15;gene=hslR;Parent=GCA008085315_01464_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1188,COG:J,KEGG:K04762,RefSeq:WP_005545092.1,SO:0001217,UniParc:UPI0001B9F131,UniRef:UniRef100_UPI0001B9F131,UniRef:UniRef50_P44754,UniRef:UniRef90_A0A142FZD4 contig_20 Pyrodigal gene 45630 46502 . + . ID=GCA008085315_01465_gene;locus_tag=GCA008085315_01465;gene=hslO contig_20 Pyrodigal CDS 45630 46502 . + 0 ID=GCA008085315_01465;Name=Hsp33 family molecular chaperone HslO;locus_tag=GCA008085315_01465;product=Hsp33 family molecular chaperone HslO;Dbxref=GO:0006457,GO:0051082;gene=hslO;Parent=GCA008085315_01465_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1281,COG:O,RefSeq:WP_005545089.1,SO:0001217,UniParc:UPI0001B9F130,UniRef:UniRef100_UPI0001B9F130,UniRef:UniRef50_P44877,UniRef:UniRef90_E6KV50 contig_20 Pyrodigal gene 46905 47129 . + . ID=GCA008085315_01466_gene;locus_tag=GCA008085315_01466;gene=tatA contig_20 Pyrodigal CDS 46905 47129 . + 0 ID=GCA008085315_01466;Name=Sec-independent protein translocase subunit TatA;locus_tag=GCA008085315_01466;product=Sec-independent protein translocase subunit TatA;gene=tatA;Parent=GCA008085315_01466_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1826,COG:U,RefSeq:WP_005545087.1,SO:0001217,UniParc:UPI0001B9F12F,UniRef:UniRef100_UPI0001B9F12F,UniRef:UniRef50_Q7VN63,UniRef:UniRef90_A0A142FZC8 contig_20 Pyrodigal gene 47133 47795 . + . ID=GCA008085315_01467_gene;locus_tag=GCA008085315_01467;gene=tatB contig_20 Pyrodigal CDS 47133 47795 . + 0 ID=GCA008085315_01467;Name=Sec-independent protein translocase protein TatB;locus_tag=GCA008085315_01467;product=Sec-independent protein translocase protein TatB;Dbxref=GO:0008320,GO:0015628,GO:0016020;gene=tatB;Parent=GCA008085315_01467_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1826,COG:U,RefSeq:WP_005545085.1,SO:0001217,UniParc:UPI0001B9F12E,UniRef:UniRef100_UPI0001B9F12E,UniRef:UniRef50_P57047,UniRef:UniRef90_G4A5D4 contig_20 Pyrodigal gene 47833 48597 . + . ID=GCA008085315_01468_gene;locus_tag=GCA008085315_01468;gene=tatC contig_20 Pyrodigal CDS 47833 48597 . + 0 ID=GCA008085315_01468;Name=Sec-independent protein translocase subunit TatC;locus_tag=GCA008085315_01468;product=Sec-independent protein translocase subunit TatC;gene=tatC;Parent=GCA008085315_01468_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0805,COG:U,KEGG:K03118,RefSeq:WP_005545082.1,SO:0001217,UniParc:UPI0001B9F12D,UniRef:UniRef100_UPI0001B9F12D,UniRef:UniRef50_A0AA43QD33,UniRef:UniRef90_E6KV46 contig_20 Pyrodigal gene 48616 49638 . + . ID=GCA008085315_01469_gene;locus_tag=GCA008085315_01469;gene=hemB contig_20 Pyrodigal CDS 48616 49638 . + 0 ID=GCA008085315_01469;Name=porphobilinogen synthase;locus_tag=GCA008085315_01469;product=porphobilinogen synthase;Dbxref=GO:0003824,GO:0004655,GO:0033014,GO:0046872;gene=hemB;Parent=GCA008085315_01469_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0113,COG:H,KEGG:K01698,RefSeq:WP_005545080.1,SO:0001217,UniParc:UPI0001B9F0E8,UniRef:UniRef100_UPI0001B9F0E8,UniRef:UniRef50_Q59643,UniRef:UniRef90_A0A142FZC5;ec_number=4.2.1.24 contig_20 Pyrodigal gene 49764 50405 . + . ID=GCA008085315_01470_gene;locus_tag=GCA008085315_01470 contig_20 Pyrodigal CDS 49764 50405 . + 0 ID=GCA008085315_01470;Name=Replication protein;locus_tag=GCA008085315_01470;product=Replication protein;Parent=GCA008085315_01470_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_S4WBB8,UniRef:UniRef90_S4WBB8 contig_20 Pyrodigal gene 50967 51278 . - . ID=GCA008085315_01471_gene;locus_tag=GCA008085315_01471 contig_20 Pyrodigal CDS 50967 51278 . - 0 ID=GCA008085315_01471;Name=hypothetical protein;locus_tag=GCA008085315_01471;product=hypothetical protein;Parent=GCA008085315_01471_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_UPI00022ADE74,UniRef:UniRef90_UPI00022ADE74 contig_20 Pyrodigal gene 51325 51564 . - . ID=GCA008085315_01472_gene;locus_tag=GCA008085315_01472;gene=parB contig_20 Pyrodigal CDS 51325 51564 . - 0 ID=GCA008085315_01472;Name=Chromosome partitioning protein ParB;locus_tag=GCA008085315_01472;product=Chromosome partitioning protein ParB;gene=parB;Parent=GCA008085315_01472_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148320939.1,SO:0001217,UniParc:UPI0011D551F7,UniRef:UniRef100_UPI0011D551F7,UniRef:UniRef50_S4WBC3,UniRef:UniRef90_S4WBC3 contig_20 Pyrodigal gene 51557 52198 . - . ID=GCA008085315_01473_gene;locus_tag=GCA008085315_01473;gene=parA contig_20 Pyrodigal CDS 51557 52198 . - 0 ID=GCA008085315_01473;Name=ParA family partition ATPase;locus_tag=GCA008085315_01473;product=ParA family partition ATPase;gene=parA;Parent=GCA008085315_01473_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148320940.1,SO:0001217,UniParc:UPI0011D33CA0,UniRef:UniRef100_UPI0011D33CA0,UniRef:UniRef50_Q9F260,UniRef:UniRef90_Q9F260 contig_20 Pyrodigal gene 52223 52357 . - . ID=GCA008085315_01474_gene;locus_tag=GCA008085315_01474 contig_20 Pyrodigal CDS 52223 52357 . - 0 ID=GCA008085315_01474;Name=hypothetical protein;locus_tag=GCA008085315_01474;product=hypothetical protein;Parent=GCA008085315_01474_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_020752104.1,SO:0001217,UniParc:UPI00022BFFA5,UniRef:UniRef100_S4W5X0,UniRef:UniRef50_Q9F259,UniRef:UniRef90_S4W5X0 contig_20 Pyrodigal gene 52618 52785 . + . ID=GCA008085315_01475_gene;locus_tag=GCA008085315_01475 contig_20 Pyrodigal CDS 52618 52785 . + 0 ID=GCA008085315_01475;Name=hypothetical protein;locus_tag=GCA008085315_01475;product=hypothetical protein;Parent=GCA008085315_01475_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005555900.1,SO:0001217,UniParc:UPI00022ABAF3,UniRef:UniRef100_S4WCK8,UniRef:UniRef50_Q9F258,UniRef:UniRef90_Q9F258 contig_20 Pyrodigal gene 52782 53066 . + . ID=GCA008085315_01476_gene;locus_tag=GCA008085315_01476 contig_20 Pyrodigal CDS 52782 53066 . + 0 ID=GCA008085315_01476;Name=Type II toxin-antitoxin system RelE/ParE family toxin;locus_tag=GCA008085315_01476;product=Type II toxin-antitoxin system RelE/ParE family toxin;Parent=GCA008085315_01476_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148320941.1,SO:0001217,UniParc:UPI0011DA1733,UniRef:UniRef100_UPI0011DA1733,UniRef:UniRef50_U1QIV9,UniRef:UniRef90_Q9F257 contig_20 Pyrodigal gene 53367 53486 . - . ID=GCA008085315_01477_gene;locus_tag=GCA008085315_01477 contig_20 Pyrodigal CDS 53367 53486 . - 0 ID=GCA008085315_01477;Name=hypothetical protein;locus_tag=GCA008085315_01477;product=hypothetical protein;Parent=GCA008085315_01477_gene;inference=ab initio prediction:Pyrodigal:3.5 contig_20 Pyrodigal gene 54180 54509 . + . ID=GCA008085315_01478_gene;locus_tag=GCA008085315_01478 contig_20 Pyrodigal CDS 54180 54509 . + 0 ID=GCA008085315_01478;Name=hypothetical protein;locus_tag=GCA008085315_01478;product=hypothetical protein;Parent=GCA008085315_01478_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_233439049.1,SO:0001217,UniParc:UPI001F47C30A,UniRef:UniRef100_UPI001F47C30A,UniRef:UniRef50_UPI001F47C30A,UniRef:UniRef90_UPI001F47C30A contig_20 Infernal gene 54436 54614 . - . ID=GCA008085315_01479_gene;locus_tag=GCA008085315_01479;gene=AaHKsRNA41 contig_20 Infernal ncRNA 54436 54614 1.8e-28 - . ID=GCA008085315_01479;Name=Aggregatibacter sRNA 41;locus_tag=GCA008085315_01479;product=Aggregatibacter sRNA 41;Dbxref=RFAM:RF02901;Parent=GCA008085315_01479_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02901 contig_20 Pyrodigal gene 54632 56713 . - . ID=GCA008085315_01480_gene;locus_tag=GCA008085315_01480;gene=glyS contig_20 Pyrodigal CDS 54632 56713 . - 0 ID=GCA008085315_01480;Name=Glycine--tRNA ligase beta subunit;locus_tag=GCA008085315_01480;product=Glycine--tRNA ligase beta subunit;Dbxref=GO:0004814,GO:0004820,GO:0005524,GO:0005829,GO:0006420,GO:0006426;gene=glyS;Parent=GCA008085315_01480_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0751,COG:J,RefSeq:WP_005545078.1,SO:0001217,UniParc:UPI0001B9F0E7,UniRef:UniRef100_UPI0001B9F0E7,UniRef:UniRef50_P00961,UniRef:UniRef90_P43822;ec_number=6.1.1.14 contig_20 Pyrodigal gene 56795 57499 . - . ID=GCA008085315_01481_gene;locus_tag=GCA008085315_01481 contig_20 Pyrodigal CDS 56795 57499 . - 0 ID=GCA008085315_01481;Name=DUF4393 domain-containing protein;locus_tag=GCA008085315_01481;product=DUF4393 domain-containing protein;Parent=GCA008085315_01481_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005545076.1,SO:0001217,UniParc:UPI0001B9F0E6,UniRef:UniRef100_UPI0001B9F0E6,UniRef:UniRef50_A0A9X2WGW9,UniRef:UniRef90_UPI0029152F11 contig_20 Pyrodigal gene 57704 57880 . - . ID=GCA008085315_01482_gene;locus_tag=GCA008085315_01482 contig_20 Pyrodigal CDS 57704 57880 . - 0 ID=GCA008085315_01482;Name=nucleotidyltransferase family protein;locus_tag=GCA008085315_01482;product=nucleotidyltransferase family protein;Parent=GCA008085315_01482_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148320942.1,SO:0001217,UniParc:UPI0011D37D03,UniRef:UniRef100_UPI0011D37D03,UniRef:UniRef50_UPI0011D37D03,UniRef:UniRef90_UPI0011D37D03 contig_20 Pyrodigal gene 57903 58007 . - . ID=GCA008085315_01483_gene;locus_tag=GCA008085315_01483 contig_20 Pyrodigal CDS 57903 58007 . - 0 ID=GCA008085315_01483;Name=hypothetical protein;locus_tag=GCA008085315_01483;product=hypothetical protein;Parent=GCA008085315_01483_gene;inference=ab initio prediction:Pyrodigal:3.5 contig_20 Pyrodigal gene 58047 58307 . - . ID=GCA008085315_01484_gene;locus_tag=GCA008085315_01484 contig_20 Pyrodigal CDS 58047 58307 . - 0 ID=GCA008085315_01484;Name=Glutaredoxin;locus_tag=GCA008085315_01484;product=Glutaredoxin;Parent=GCA008085315_01484_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4545,COG:O,RefSeq:WP_005587962.1,SO:0001217,UniParc:UPI0001B9F0E4,UniRef:UniRef100_UPI0001B9F0E4,UniRef:UniRef50_A0A142G0R6,UniRef:UniRef90_A0A142G0R6 contig_20 Pyrodigal gene 58357 59262 . - . ID=GCA008085315_01485_gene;locus_tag=GCA008085315_01485;gene=glyQ contig_20 Pyrodigal CDS 58357 59262 . - 0 ID=GCA008085315_01485;Name=glycine--tRNA ligase subunit alpha;locus_tag=GCA008085315_01485;product=glycine--tRNA ligase subunit alpha;Dbxref=GO:0000166,GO:0004820,GO:0005524,GO:0005829,GO:0006426;gene=glyQ;Parent=GCA008085315_01485_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0752,COG:J,KEGG:K01878,RefSeq:WP_005555339.1,SO:0001217,UniParc:UPI0001B9F0E3,UniRef:UniRef100_G4A5E3,UniRef:UniRef50_P00960,UniRef:UniRef90_Q7VKG5;ec_number=6.1.1.14 contig_20 Pyrodigal gene 59454 59615 . - . ID=GCA008085315_01486_gene;locus_tag=GCA008085315_01486 contig_20 Pyrodigal CDS 59454 59615 . - 0 ID=GCA008085315_01486;Name=ferredoxin;locus_tag=GCA008085315_01486;product=ferredoxin;Parent=GCA008085315_01486_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005545066.1,SO:0001217,UniParc:UPI0001B9F0E2,UniRef:UniRef100_UPI0001B9F0E2,UniRef:UniRef50_UPI00197C13A3,UniRef:UniRef90_UPI00197C13A3 contig_20 Pyrodigal gene 59629 60243 . - . ID=GCA008085315_01487_gene;locus_tag=GCA008085315_01487;gene=dmsD contig_20 Pyrodigal CDS 59629 60243 . - 0 ID=GCA008085315_01487;Name=Tat proofreading chaperone DmsD;locus_tag=GCA008085315_01487;product=Tat proofreading chaperone DmsD;gene=dmsD;Parent=GCA008085315_01487_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3381,COG:O,RefSeq:WP_005545063.1,SO:0001217,UniParc:UPI0001B9F0E1,UniRef:UniRef100_UPI0001B9F0E1,UniRef:UniRef50_P44102,UniRef:UniRef90_A0A5D0EJZ9 contig_20 Pyrodigal gene 60291 61130 . - . ID=GCA008085315_01488_gene;locus_tag=GCA008085315_01488;gene=dmsC contig_20 Pyrodigal CDS 60291 61130 . - 0 ID=GCA008085315_01488;Name=Dimethyl sulfoxide reductase;locus_tag=GCA008085315_01488;product=Dimethyl sulfoxide reductase;gene=dmsC;Parent=GCA008085315_01488_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG3302,RefSeq:WP_005545061.1,SO:0001217,UniParc:UPI0001B9F0E0,UniRef:UniRef100_UPI0001B9F0E0,UniRef:UniRef50_P45002,UniRef:UniRef90_A0A5D0EKN1 contig_20 Pyrodigal gene 61132 61755 . - . ID=GCA008085315_01489_gene;locus_tag=GCA008085315_01489;gene=hybA contig_20 Pyrodigal CDS 61132 61755 . - 0 ID=GCA008085315_01489;Name=DMSO/selenate family reductase complex B subunit;locus_tag=GCA008085315_01489;product=DMSO/selenate family reductase complex B subunit;gene=hybA;Parent=GCA008085315_01489_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0437,KEGG:K07307,RefSeq:WP_005545058.1,SO:0001217,UniParc:UPI0001B9F0DF,UniRef:UniRef100_UPI0001B9F0DF,UniRef:UniRef50_P45003,UniRef:UniRef90_A0A5D0ELL2;ec_number=1.8.5.3 contig_20 Pyrodigal gene 61766 64186 . - . ID=GCA008085315_01490_gene;locus_tag=GCA008085315_01490;gene=dmsA contig_20 Pyrodigal CDS 61766 64186 . - 0 ID=GCA008085315_01490;Name=Dimethyl sulfoxide reductase DmsA;locus_tag=GCA008085315_01490;product=Dimethyl sulfoxide reductase DmsA;Dbxref=GO:0005886,GO:0009055,GO:0009061,GO:0009389,GO:0030151,GO:0030288,GO:0043546,GO:0051539;gene=dmsA;Parent=GCA008085315_01490_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0243,RefSeq:WP_012820870.1,SO:0001217,UniParc:UPI0001B9F0DE,UniRef:UniRef100_UPI0001B9F0DE,UniRef:UniRef50_P18775,UniRef:UniRef90_P45004;ec_number=1.8.5.3 contig_20 Pyrodigal gene 65246 65683 . - . ID=GCA008085315_01491_gene;locus_tag=GCA008085315_01491 contig_20 Pyrodigal CDS 65246 65683 . - 0 ID=GCA008085315_01491;Name=cell filamentation protein Fic;locus_tag=GCA008085315_01491;product=cell filamentation protein Fic;Parent=GCA008085315_01491_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_231098005.1,SO:0001217,UniParc:UPI00022C00E2,UniRef:UniRef100_UPI00022C00E2,UniRef:UniRef50_A0A1V3KHI5,UniRef:UniRef90_UPI001E5A87F7 contig_20 Pyrodigal gene 65804 66244 . - . ID=GCA008085315_01492_gene;locus_tag=GCA008085315_01492 contig_20 Pyrodigal CDS 65804 66244 . - 0 ID=GCA008085315_01492;Name=Fic family protein;locus_tag=GCA008085315_01492;product=Fic family protein;Parent=GCA008085315_01492_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_050846277.1,SO:0001217,UniParc:UPI00068264B9,UniRef:UniRef100_UPI00068264B9,UniRef:UniRef50_UPI001E61AD99,UniRef:UniRef90_UPI001E61AD99 contig_20 Pyrodigal gene 66680 67438 . - . ID=GCA008085315_01493_gene;locus_tag=GCA008085315_01493;gene=tolA contig_20 Pyrodigal CDS 66680 67438 . - 0 ID=GCA008085315_01493;Name=cell envelope integrity protein TolA;locus_tag=GCA008085315_01493;product=cell envelope integrity protein TolA;Dbxref=GO:0005215,GO:0006810,GO:0098567;gene=tolA;Parent=GCA008085315_01493_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0810,COG:M,RefSeq:WP_005545049.1,SO:0001217,UniParc:UPI00022BFE73,UniRef:UniRef100_UPI00022BFE73,UniRef:UniRef50_P42872,UniRef:UniRef90_A0A5D0EL28 contig_20 Pyrodigal gene 67448 67894 . - . ID=GCA008085315_01494_gene;locus_tag=GCA008085315_01494;gene=exbD contig_20 Pyrodigal CDS 67448 67894 . - 0 ID=GCA008085315_01494;Name=TonB system transport protein ExbD;locus_tag=GCA008085315_01494;product=TonB system transport protein ExbD;Dbxref=GO:0006810,GO:0015291,GO:0016020;gene=exbD;Parent=GCA008085315_01494_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0848,COG:U,RefSeq:WP_005545047.1,SO:0001217,UniParc:UPI0001B9F0D9,UniRef:UniRef100_UPI0001B9F0D9,UniRef:UniRef50_P43009,UniRef:UniRef90_A0A142G073 contig_20 Pyrodigal gene 67898 68368 . - . ID=GCA008085315_01495_gene;locus_tag=GCA008085315_01495;gene=exbB contig_20 Pyrodigal CDS 67898 68368 . - 0 ID=GCA008085315_01495;Name=TonB-system energizer ExbB;locus_tag=GCA008085315_01495;product=TonB-system energizer ExbB;Dbxref=GO:0015078,GO:0016020,GO:0055085;gene=exbB;Parent=GCA008085315_01495_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0811,COG:U,RefSeq:WP_005538526.1,SO:0001217,UniParc:UPI0001B9F0D8,UniRef:UniRef100_A0A142G072,UniRef:UniRef50_P43008,UniRef:UniRef90_A0A142G072 contig_20 Pyrodigal gene 68543 69805 . - . ID=GCA008085315_01496_gene;locus_tag=GCA008085315_01496;gene=corB contig_20 Pyrodigal CDS 68543 69805 . - 0 ID=GCA008085315_01496;Name=HlyC/CorC family transporter;locus_tag=GCA008085315_01496;product=HlyC/CorC family transporter;gene=corB;Parent=GCA008085315_01496_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4536,COG:P,KEGG:K03699,RefSeq:WP_148333978.1,SO:0001217,UniParc:UPI0011DB3BA5,UniRef:UniRef100_UPI0011DB3BA5,UniRef:UniRef50_Q57017,UniRef:UniRef90_E6KVR7 contig_20 Pyrodigal gene 69880 70674 . - . ID=GCA008085315_01497_gene;locus_tag=GCA008085315_01497;gene=ypjD contig_20 Pyrodigal CDS 69880 70674 . - 0 ID=GCA008085315_01497;Name=ABC transporter permease;locus_tag=GCA008085315_01497;product=ABC transporter permease;gene=ypjD;Parent=GCA008085315_01497_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4137,COG:R,RefSeq:WP_005545041.1,SO:0001217,UniParc:UPI0001B9F0D6,UniRef:UniRef100_UPI0001B9F0D6,UniRef:UniRef50_A0A380TPV6,UniRef:UniRef90_A0A5D0EI58 contig_20 Pyrodigal gene 70828 72207 . + . ID=GCA008085315_01498_gene;locus_tag=GCA008085315_01498;gene=ffh contig_20 Pyrodigal CDS 70828 72207 . + 0 ID=GCA008085315_01498;Name=signal recognition particle protein;locus_tag=GCA008085315_01498;product=signal recognition particle protein;Dbxref=GO:0003924,GO:0005048,GO:0005525,GO:0009306,GO:0048501;gene=ffh;Parent=GCA008085315_01498_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03106,RefSeq:WP_005545039.1,SO:0001217,UniParc:UPI0001B9F0D5,UniRef:UniRef100_UPI0001B9F0D5,UniRef:UniRef50_A0A1G7R9I6,UniRef:UniRef90_UPI0001B9F0D5;ec_number=3.6.5.4 contig_20 Pyrodigal gene 72828 73658 . - . ID=GCA008085315_01499_gene;locus_tag=GCA008085315_01499;gene=fghA contig_20 Pyrodigal CDS 72828 73658 . - 0 ID=GCA008085315_01499;Name=S-formylglutathione hydrolase;locus_tag=GCA008085315_01499;product=S-formylglutathione hydrolase;Dbxref=GO:0018738,GO:0046294;gene=fghA;Parent=GCA008085315_01499_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0627,COG:V,KEGG:K01070,RefSeq:WP_005545034.1,SO:0001217,UniParc:UPI0001B9F0D3,UniRef:UniRef100_UPI0001B9F0D3,UniRef:UniRef50_A0A3E1CDT4,UniRef:UniRef90_A0A5D0EJ24;ec_number=3.1.2.12 contig_20 Pyrodigal gene 73673 74854 . - . ID=GCA008085315_01500_gene;locus_tag=GCA008085315_01500 contig_20 Pyrodigal CDS 73673 74854 . - 0 ID=GCA008085315_01500;Name=hypothetical protein;locus_tag=GCA008085315_01500;product=hypothetical protein;Parent=GCA008085315_01500_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=PFAM:PF08240.17,PFAM:PF00107.32 contig_20 Pyrodigal gene 74936 75343 . + . ID=GCA008085315_01501_gene;locus_tag=GCA008085315_01501;gene=merR contig_20 Pyrodigal CDS 74936 75343 . + 0 ID=GCA008085315_01501;Name=MerR family transcriptional regulator;locus_tag=GCA008085315_01501;product=MerR family transcriptional regulator;gene=merR;Parent=GCA008085315_01501_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K21745,RefSeq:WP_005545029.1,SO:0001217,UniParc:UPI00022ACF93,UniRef:UniRef100_UPI00022ACF93,UniRef:UniRef50_P44558,UniRef:UniRef90_A0A5D0EM80 contig_20 Pyrodigal gene 75457 76206 . - . ID=GCA008085315_01502_gene;locus_tag=GCA008085315_01502;gene=ydfG contig_20 Pyrodigal CDS 75457 76206 . - 0 ID=GCA008085315_01502;Name=Oxidoreductase;locus_tag=GCA008085315_01502;product=Oxidoreductase;gene=ydfG;Parent=GCA008085315_01502_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG4221,RefSeq:WP_005545027.1,SO:0001217,UniParc:UPI0001B9F0D0,UniRef:UniRef100_UPI0001B9F0D0,UniRef:UniRef50_P25145,UniRef:UniRef90_A0A5D0EKU1 contig_20 Pyrodigal gene 76428 77795 . - . ID=GCA008085315_01503_gene;locus_tag=GCA008085315_01503;gene=purB contig_20 Pyrodigal CDS 76428 77795 . - 0 ID=GCA008085315_01503;Name=adenylosuccinate lyase;locus_tag=GCA008085315_01503;product=adenylosuccinate lyase;Dbxref=GO:0004018,GO:0006188,GO:0009152;gene=purB;Parent=GCA008085315_01503_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0015,COG:F,KEGG:K01756,RefSeq:WP_005545025.1,SO:0001217,UniParc:UPI0001B9F0CE,UniRef:UniRef100_UPI0001B9F0CE,UniRef:UniRef50_P57351,UniRef:UniRef90_A0A5D0EJQ2;ec_number=4.3.2.2 contig_20 Pyrodigal gene 77819 78430 . - . ID=GCA008085315_01504_gene;locus_tag=GCA008085315_01504;gene=hflD contig_20 Pyrodigal CDS 77819 78430 . - 0 ID=GCA008085315_01504;Name=high frequency lysogenization protein HflD;locus_tag=GCA008085315_01504;product=high frequency lysogenization protein HflD;gene=hflD;Parent=GCA008085315_01504_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2915,COG:XT,KEGG:K07153,RefSeq:WP_148333979.1,SO:0001217,UniParc:UPI0011DC2EA9,UniRef:UniRef100_UPI0011DC2EA9,UniRef:UniRef50_A6VKB3,UniRef:UniRef90_A0A142G063 contig_20 Pyrodigal gene 78543 78953 . + . ID=GCA008085315_01505_gene;locus_tag=GCA008085315_01505 contig_20 Pyrodigal CDS 78543 78953 . + 0 ID=GCA008085315_01505;Name=Copper chaperone PCu(A)C;locus_tag=GCA008085315_01505;product=Copper chaperone PCu(A)C;Parent=GCA008085315_01505_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2847,COG:P,RefSeq:WP_005545022.1,SO:0001217,UniParc:UPI0001B9F0CC,UniRef:UniRef100_UPI0001B9F0CC,UniRef:UniRef50_Q9CJZ3,UniRef:UniRef90_A0A142G062 contig_20 Pyrodigal gene 79092 79628 . + . ID=GCA008085315_01506_gene;locus_tag=GCA008085315_01506;gene=pyrR contig_20 Pyrodigal CDS 79092 79628 . + 0 ID=GCA008085315_01506;Name=bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;locus_tag=GCA008085315_01506;product=bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;Dbxref=GO:0009116;gene=pyrR;Parent=GCA008085315_01506_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2065,COG:F,KEGG:K02825,RefSeq:WP_005539986.1,SO:0001217,UniParc:UPI0001B9F0CB,UniRef:UniRef100_A0A5D0EI66,UniRef:UniRef50_P44722,UniRef:UniRef90_E6KZZ6;ec_number=2.4.2.9 contig_20 Pyrodigal gene 79695 80627 . + . ID=GCA008085315_01507_gene;locus_tag=GCA008085315_01507;gene=surA contig_20 Pyrodigal CDS 79695 80627 . + 0 ID=GCA008085315_01507;Name=Peptidyl-prolyl cis-trans isomerase surA;locus_tag=GCA008085315_01507;product=Peptidyl-prolyl cis-trans isomerase surA;gene=surA;Parent=GCA008085315_01507_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0760,COG:O,SO:0001217,UniRef:UniRef50_P44721,UniRef:UniRef90_A0A336NHD6 contig_20 Pyrodigal gene 80706 81569 . + . ID=GCA008085315_01508_gene;locus_tag=GCA008085315_01508;gene=rsmA contig_20 Pyrodigal CDS 80706 81569 . + 0 ID=GCA008085315_01508;Name=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;locus_tag=GCA008085315_01508;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;Dbxref=GO:0000179,GO:0006364;gene=rsmA;Parent=GCA008085315_01508_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0030,COG:J,RefSeq:WP_005545017.1,SO:0001217,UniParc:UPI0001B9F0C9,UniRef:UniRef100_UPI0001B9F0C9,UniRef:UniRef50_P06992,UniRef:UniRef90_A0A142G059;ec_number=2.1.1.182 contig_20 Pyrodigal gene 81585 82412 . + . ID=GCA008085315_01509_gene;locus_tag=GCA008085315_01509;gene=apaH contig_20 Pyrodigal CDS 81585 82412 . + 0 ID=GCA008085315_01509;Name=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH;locus_tag=GCA008085315_01509;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH;Dbxref=GO:0008803;gene=apaH;Parent=GCA008085315_01509_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0639,COG:T,RefSeq:WP_005545015.1,SO:0001217,UniParc:UPI0001B9F0C8,UniRef:UniRef100_UPI0001B9F0C8,UniRef:UniRef50_P44751,UniRef:UniRef90_O52655;ec_number=3.6.1.41 contig_20 Infernal gene 82384 82484 . + . ID=GCA008085315_01510_gene;locus_tag=GCA008085315_01510;gene=AaHKsRNA22 contig_20 Infernal ncRNA 82384 82484 1.6e-10 + . ID=GCA008085315_01510;Name=Aggregatibacter sRNA 22;locus_tag=GCA008085315_01510;product=Aggregatibacter sRNA 22;Dbxref=RFAM:RF02902;Parent=GCA008085315_01510_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02902 contig_20 Pyrodigal gene 82503 82910 . + . ID=GCA008085315_01511_gene;locus_tag=GCA008085315_01511 contig_20 Pyrodigal CDS 82503 82910 . + 0 ID=GCA008085315_01511;Name=Nucleotidyltransferase;locus_tag=GCA008085315_01511;product=Nucleotidyltransferase;Parent=GCA008085315_01511_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005545013.1,SO:0001217,UniParc:UPI00022ACF8D,UniRef:UniRef100_UPI00022ACF8D,UniRef:UniRef50_A0A1A0C885,UniRef:UniRef90_A0A142G057 contig_20 Pyrodigal gene 82894 83187 . + . ID=GCA008085315_01512_gene;locus_tag=GCA008085315_01512;gene=mJ0604 contig_20 Pyrodigal CDS 82894 83187 . + 0 ID=GCA008085315_01512;Name=DNA polymerase beta subunit;locus_tag=GCA008085315_01512;product=DNA polymerase beta subunit;gene=mJ0604;Parent=GCA008085315_01512_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1708,COG:R,RefSeq:WP_005545011.1,SO:0001217,UniParc:UPI0001B9F0C6,UniRef:UniRef100_UPI0001B9F0C6,UniRef:UniRef50_A0A1V3ILM3,UniRef:UniRef90_A0A142G056 contig_20 Pyrodigal gene 83215 83847 . + . ID=GCA008085315_01513_gene;locus_tag=GCA008085315_01513 contig_20 Pyrodigal CDS 83215 83847 . + 0 ID=GCA008085315_01513;Name=Diadenosine tetraphosphatase;locus_tag=GCA008085315_01513;product=Diadenosine tetraphosphatase;Parent=GCA008085315_01513_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_012820865.1,SO:0001217,UniParc:UPI0001B9F0C5,UniRef:UniRef100_UPI0001B9F0C5,UniRef:UniRef50_G4A5I0,UniRef:UniRef90_G4A5I0 contig_20 Pyrodigal gene 83968 86556 . + . ID=GCA008085315_01514_gene;locus_tag=GCA008085315_01514;gene=leuS contig_20 Pyrodigal CDS 83968 86556 . + 0 ID=GCA008085315_01514;Name=leucine--tRNA ligase;locus_tag=GCA008085315_01514;product=leucine--tRNA ligase;Dbxref=GO:0000166,GO:0004823,GO:0005524,GO:0006429;gene=leuS;Parent=GCA008085315_01514_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0495,COG:J,KEGG:K01869,RefSeq:WP_005587954.1,SO:0001217,UniParc:UPI0002AC05C6,UniRef:UniRef100_UPI0002AC05C6,UniRef:UniRef50_P07813,UniRef:UniRef90_E6KZZ1;ec_number=6.1.1.4 contig_20 Infernal gene 86591 86688 . + . ID=GCA008085315_01515_gene;locus_tag=GCA008085315_01515;gene=AaHKsRNA22 contig_20 Infernal ncRNA 86591 86688 3.8e-06 + . ID=GCA008085315_01515;Name=Aggregatibacter sRNA 22;locus_tag=GCA008085315_01515;product=Aggregatibacter sRNA 22;Dbxref=RFAM:RF02902;Parent=GCA008085315_01515_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02902 contig_20 Pyrodigal gene 86698 87201 . + . ID=GCA008085315_01516_gene;locus_tag=GCA008085315_01516;gene=lptE contig_20 Pyrodigal CDS 86698 87201 . + 0 ID=GCA008085315_01516;Name=LPS-assembly lipoprotein LptE;locus_tag=GCA008085315_01516;product=LPS-assembly lipoprotein LptE;gene=lptE;Parent=GCA008085315_01516_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2980,COG:M,KEGG:K03643,RefSeq:WP_005545005.1,SO:0001217,UniParc:UPI0001B9F0C1,UniRef:UniRef100_UPI0001B9F0C1,UniRef:UniRef50_E6KZZ0,UniRef:UniRef90_G4A5I3 contig_20 Pyrodigal gene 87201 88235 . + . ID=GCA008085315_01517_gene;locus_tag=GCA008085315_01517;gene=holA contig_20 Pyrodigal CDS 87201 88235 . + 0 ID=GCA008085315_01517;Name=DNA polymerase III subunit delta;locus_tag=GCA008085315_01517;product=DNA polymerase III subunit delta;Dbxref=GO:0003677,GO:0003887,GO:0006260;gene=holA;Parent=GCA008085315_01517_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1466,COG:L,RefSeq:WP_148320945.1,SO:0001217,UniParc:UPI0011D97E75,UniRef:UniRef100_UPI0011D97E75,UniRef:UniRef50_P43747,UniRef:UniRef90_A0A142G052;ec_number=2.7.7.7 contig_20 Pyrodigal gene 88590 88712 . + . ID=GCA008085315_01518_gene;locus_tag=GCA008085315_01518 contig_20 Pyrodigal CDS 88590 88712 . + 0 ID=GCA008085315_01518;Name=hypothetical protein;locus_tag=GCA008085315_01518;product=hypothetical protein;Parent=GCA008085315_01518_gene;inference=ab initio prediction:Pyrodigal:3.5 contig_20 Pyrodigal gene 88727 89131 . - . ID=GCA008085315_01519_gene;locus_tag=GCA008085315_01519;gene=mutT contig_20 Pyrodigal CDS 88727 89131 . - 0 ID=GCA008085315_01519;Name=8-oxo-dGTP diphosphatase MutT;locus_tag=GCA008085315_01519;product=8-oxo-dGTP diphosphatase MutT;Dbxref=GO:0006281,GO:0016818;gene=mutT;Parent=GCA008085315_01519_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1051,COG:F,RefSeq:WP_148320946.1,SO:0001217,UniParc:UPI0011D3158E,UniRef:UniRef100_UPI0011D3158E,UniRef:UniRef50_P44932,UniRef:UniRef90_A0A142G051;ec_number=3.6.1.55 contig_20 Pyrodigal gene 89208 91907 . - . ID=GCA008085315_01520_gene;locus_tag=GCA008085315_01520;gene=secA contig_20 Pyrodigal CDS 89208 91907 . - 0 ID=GCA008085315_01520;Name=preprotein translocase subunit SecA;locus_tag=GCA008085315_01520;product=preprotein translocase subunit SecA;Dbxref=GO:0005524,GO:0006605,GO:0006886,GO:0017038;gene=secA;Parent=GCA008085315_01520_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0653,COG:U,KEGG:K03070,RefSeq:WP_005544999.1,SO:0001217,UniParc:UPI00022ACF86,UniRef:UniRef100_A0A142G050,UniRef:UniRef50_P10408,UniRef:UniRef90_A0A142G050;ec_number=7.4.2.8 contig_20 Pyrodigal gene 91980 92297 . - . ID=GCA008085315_01521_gene;locus_tag=GCA008085315_01521;gene=secM contig_20 Pyrodigal CDS 91980 92297 . - 0 ID=GCA008085315_01521;Name=secA translation cis-regulator SecM;locus_tag=GCA008085315_01521;product=secA translation cis-regulator SecM;gene=secM;Parent=GCA008085315_01521_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005544997.1,SO:0001217,UniParc:UPI0001B9F87B,UniRef:UniRef100_UPI0001B9F87B,UniRef:UniRef50_E6KZY5,UniRef:UniRef90_G4A5I7 contig_20 Pyrodigal gene 92389 92700 . + . ID=GCA008085315_01522_gene;locus_tag=GCA008085315_01522 contig_20 Pyrodigal CDS 92389 92700 . + 0 ID=GCA008085315_01522;Name=DUF721 domain-containing protein;locus_tag=GCA008085315_01522;product=DUF721 domain-containing protein;Parent=GCA008085315_01522_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4701,COG:S,RefSeq:WP_005544992.1,SO:0001217,UniParc:UPI0001B9F87A,UniRef:UniRef100_UPI0001B9F87A,UniRef:UniRef50_Q65VS8,UniRef:UniRef90_G4A5I9 contig_20 Pyrodigal gene 92809 93219 . + . ID=GCA008085315_01523_gene;locus_tag=GCA008085315_01523;gene=soxR contig_20 Pyrodigal CDS 92809 93219 . + 0 ID=GCA008085315_01523;Name=MerR family transcriptional regulator;locus_tag=GCA008085315_01523;product=MerR family transcriptional regulator;gene=soxR;Parent=GCA008085315_01523_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0789,COG:K,RefSeq:WP_005544990.1,SO:0001217,UniParc:UPI00022BFE6D,UniRef:UniRef100_UPI00022BFE6D,UniRef:UniRef50_P45277,UniRef:UniRef90_A0A5D0KT98 contig_20 Pyrodigal gene 93288 96119 . - . ID=GCA008085315_01524_gene;locus_tag=GCA008085315_01524;gene=uvrA contig_20 Pyrodigal CDS 93288 96119 . - 0 ID=GCA008085315_01524;Name=excinuclease ABC subunit UvrA;locus_tag=GCA008085315_01524;product=excinuclease ABC subunit UvrA;Dbxref=GO:0003677,GO:0005524,GO:0005737,GO:0006289,GO:0008270,GO:0009380,GO:0009381,GO:0009432,GO:0016887;gene=uvrA;Parent=GCA008085315_01524_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0178,COG:L,KEGG:K03701,RefSeq:WP_148321363.1,SO:0001217,UniParc:UPI0011D44ACC,UniRef:UniRef100_UPI0011D44ACC,UniRef:UniRef50_P0A698,UniRef:UniRef90_P44410;ec_number=3.1.25.- contig_20 Pyrodigal gene 96290 96769 . + . ID=GCA008085315_01525_gene;locus_tag=GCA008085315_01525 contig_20 Pyrodigal CDS 96290 96769 . + 0 ID=GCA008085315_01525;Name=Single-stranded DNA-binding protein;locus_tag=GCA008085315_01525;product=Single-stranded DNA-binding protein;Parent=GCA008085315_01525_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005544986.1,SO:0001217,UniParc:UPI0001B9F877,UniRef:UniRef100_UPI0001B9F877,UniRef:UniRef50_Q83EP4,UniRef:UniRef90_A0A336NBJ2 contig_20 Pyrodigal gene 96875 97729 . - . ID=GCA008085315_01526_gene;locus_tag=GCA008085315_01526;gene=dam contig_20 Pyrodigal CDS 96875 97729 . - 0 ID=GCA008085315_01526;Name=Site-specific DNA-methyltransferase (adenine-specific);locus_tag=GCA008085315_01526;product=Site-specific DNA-methyltransferase (adenine-specific);gene=dam;Parent=GCA008085315_01526_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0338,COG:L,KEGG:K06223,RefSeq:WP_148320948.1,SO:0001217,UniParc:UPI0011DA0BFE,UniRef:UniRef100_UPI0011DA0BFE,UniRef:UniRef50_P44431,UniRef:UniRef90_Q9AIK7;ec_number=2.1.1.72 contig_20 Pyrodigal gene 97732 98820 . - . ID=GCA008085315_01527_gene;locus_tag=GCA008085315_01527;gene=aroB contig_20 Pyrodigal CDS 97732 98820 . - 0 ID=GCA008085315_01527;Name=3-dehydroquinate synthase;locus_tag=GCA008085315_01527;product=3-dehydroquinate synthase;Dbxref=GO:0003856,GO:0005737,GO:0009073,GO:0009423;gene=aroB;Parent=GCA008085315_01527_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0337,COG:E,KEGG:K01735,RefSeq:WP_005544982.1,SO:0001217,UniParc:UPI0001B9F875,UniRef:UniRef100_UPI0001B9F875,UniRef:UniRef50_P07639,UniRef:UniRef90_A0A5D0ENM2;ec_number=4.2.3.4 contig_20 Pyrodigal gene 98844 99371 . - . ID=GCA008085315_01528_gene;locus_tag=GCA008085315_01528;gene=aroK contig_20 Pyrodigal CDS 98844 99371 . - 0 ID=GCA008085315_01528;Name=shikimate kinase AroK;locus_tag=GCA008085315_01528;product=shikimate kinase AroK;gene=aroK;Parent=GCA008085315_01528_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0703,COG:E,RefSeq:WP_005555432.1,SO:0001217,UniParc:UPI0001B9F874,UniRef:UniRef100_G4A5J8,UniRef:UniRef50_Q65R34,UniRef:UniRef90_A0A142G034;ec_number=2.7.1.71 contig_20 Pyrodigal gene 99585 100994 . - . ID=GCA008085315_01529_gene;locus_tag=GCA008085315_01529;gene=hofQ contig_20 Pyrodigal CDS 99585 100994 . - 0 ID=GCA008085315_01529;Name=Secretin;locus_tag=GCA008085315_01529;product=Secretin;gene=hofQ;Parent=GCA008085315_01529_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4796,COG:U,RefSeq:WP_148321366.1,SO:0001217,UniParc:UPI0011D38F3A,UniRef:UniRef100_UPI0011D38F3A,UniRef:UniRef50_P31772,UniRef:UniRef90_A0A5D0ENJ2 contig_20 Pyrodigal gene 101014 101406 . - . ID=GCA008085315_01530_gene;locus_tag=GCA008085315_01530;gene=comD contig_20 Pyrodigal CDS 101014 101406 . - 0 ID=GCA008085315_01530;Name=Competence protein ComD;locus_tag=GCA008085315_01530;product=Competence protein ComD;gene=comD;Parent=GCA008085315_01530_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005544975.1,SO:0001217,UniParc:UPI0001B9F872,UniRef:UniRef100_UPI001E5DF6CF,UniRef:UniRef50_A0A5D0ENK0,UniRef:UniRef90_A0A5D0ENK0 contig_20 Pyrodigal gene 101406 101930 . - . ID=GCA008085315_01531_gene;locus_tag=GCA008085315_01531 contig_20 Pyrodigal CDS 101406 101930 . - 0 ID=GCA008085315_01531;Name=Competence protein;locus_tag=GCA008085315_01531;product=Competence protein;Parent=GCA008085315_01531_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005543969.1,SO:0001217,UniParc:UPI0001B9F871,UniRef:UniRef100_A0A142G031,UniRef:UniRef50_E6KVM1,UniRef:UniRef90_A0A142G031 contig_20 Pyrodigal gene 101927 102445 . - . ID=GCA008085315_01532_gene;locus_tag=GCA008085315_01532;gene=comB contig_20 Pyrodigal CDS 101927 102445 . - 0 ID=GCA008085315_01532;Name=Competence protein ComB;locus_tag=GCA008085315_01532;product=Competence protein ComB;gene=comB;Parent=GCA008085315_01532_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3166,COG:NU,RefSeq:WP_005544973.1,SO:0001217,UniParc:UPI0001B9F870,UniRef:UniRef100_UPI0001B9F870,UniRef:UniRef50_A0A336N865,UniRef:UniRef90_A0A5D0ENM5 contig_20 Pyrodigal gene 102456 103265 . - . ID=GCA008085315_01533_gene;locus_tag=GCA008085315_01533;gene=comA contig_20 Pyrodigal CDS 102456 103265 . - 0 ID=GCA008085315_01533;Name=Competence protein ComA;locus_tag=GCA008085315_01533;product=Competence protein ComA;gene=comA;Parent=GCA008085315_01533_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4972,COG:NU,RefSeq:WP_148333980.1,SO:0001217,UniParc:UPI0011D5A117,UniRef:UniRef100_UPI0011D5A117,UniRef:UniRef50_U1QZP4,UniRef:UniRef90_A0A5D0ENJ4 contig_20 Pyrodigal gene 103399 105966 . + . ID=GCA008085315_01534_gene;locus_tag=GCA008085315_01534;gene=mrcA contig_20 Pyrodigal CDS 103399 105966 . + 0 ID=GCA008085315_01534;Name=Penicillin-binding protein 1A;locus_tag=GCA008085315_01534;product=Penicillin-binding protein 1A;gene=mrcA;Parent=GCA008085315_01534_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5009,COG:M,KEGG:K05366,RefSeq:WP_005566815.1,SO:0001217,UniParc:UPI00022AC504,UniRef:UniRef100_UPI00022AC504,UniRef:UniRef50_P31776,UniRef:UniRef90_A0A336N9F3;ec_number=3.4.16.4 contig_20 Pyrodigal gene 106061 106906 . + . ID=GCA008085315_01535_gene;locus_tag=GCA008085315_01535;gene=rlmJ contig_20 Pyrodigal CDS 106061 106906 . + 0 ID=GCA008085315_01535;Name=Ribosomal RNA large subunit methyltransferase J;locus_tag=GCA008085315_01535;product=Ribosomal RNA large subunit methyltransferase J;gene=rlmJ;Parent=GCA008085315_01535_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2961,COG:J,RefSeq:WP_005544967.1,SO:0001217,UniParc:UPI0001B9F86D,UniRef:UniRef100_UPI0001B9F86D,UniRef:UniRef50_P37634,UniRef:UniRef90_E6KVM5 contig_20 Pyrodigal gene 107001 108371 . + . ID=GCA008085315_01536_gene;locus_tag=GCA008085315_01536;gene=gorA contig_20 Pyrodigal CDS 107001 108371 . + 0 ID=GCA008085315_01536;Name=glutathione-disulfide reductase;locus_tag=GCA008085315_01536;product=glutathione-disulfide reductase;Dbxref=GO:0004362,GO:0006749,GO:0045454,GO:0050660,GO:0050661;gene=gorA;Parent=GCA008085315_01536_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1249,KEGG:K00383,RefSeq:WP_005544964.1,SO:0001217,UniParc:UPI0001B9F86C,UniRef:UniRef100_UPI0001B9F86C,UniRef:UniRef50_P43783,UniRef:UniRef90_A0A5D0EP44;ec_number=1.8.1.7 contig_20 Pyrodigal gene 108468 109112 . - . ID=GCA008085315_01537_gene;locus_tag=GCA008085315_01537;gene=crp contig_20 Pyrodigal CDS 108468 109112 . - 0 ID=GCA008085315_01537;Name=cAMP-activated global transcriptional regulator CRP;locus_tag=GCA008085315_01537;product=cAMP-activated global transcriptional regulator CRP;Dbxref=GO:0003677,GO:0003700,GO:0005829,GO:0006355,GO:0030552;gene=crp;Parent=GCA008085315_01537_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0664,COG:T,RefSeq:WP_005544961.1,SO:0001217,UniParc:UPI0001B9F86B,UniRef:UniRef100_UPI0001B9F86B,UniRef:UniRef50_P55222,UniRef:UniRef90_O05689 contig_20 Pyrodigal gene 109150 109368 . - . ID=GCA008085315_01538_gene;locus_tag=GCA008085315_01538;gene=yheU contig_20 Pyrodigal CDS 109150 109368 . - 0 ID=GCA008085315_01538;Name=YheU family protein;locus_tag=GCA008085315_01538;product=YheU family protein;gene=yheU;Parent=GCA008085315_01538_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3089,COG:S,RefSeq:WP_148320951.1,SO:0001217,UniParc:UPI0011D94D24,UniRef:UniRef100_UPI0011D94D24,UniRef:UniRef50_P44954,UniRef:UniRef90_E6KVM8 contig_20 Pyrodigal gene 109388 109987 . - . ID=GCA008085315_01539_gene;locus_tag=GCA008085315_01539;gene=slmA contig_20 Pyrodigal CDS 109388 109987 . - 0 ID=GCA008085315_01539;Name=nucleoid occlusion factor SlmA;locus_tag=GCA008085315_01539;product=nucleoid occlusion factor SlmA;Dbxref=GO:0003677,GO:0010974;gene=slmA;Parent=GCA008085315_01539_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1309,COG:K,KEGG:K05501,RefSeq:WP_148333981.1,SO:0001217,UniParc:UPI0011DAD9B5,UniRef:UniRef100_UPI0011DAD9B5,UniRef:UniRef50_Q65R67,UniRef:UniRef90_A0A5D0KVF5 contig_20 Pyrodigal gene 109987 110442 . - . ID=GCA008085315_01540_gene;locus_tag=GCA008085315_01540;gene=dut contig_20 Pyrodigal CDS 109987 110442 . - 0 ID=GCA008085315_01540;Name=dUTP diphosphatase;locus_tag=GCA008085315_01540;product=dUTP diphosphatase;Dbxref=GO:0000287,GO:0004170,GO:0006226,GO:0046081;gene=dut;Parent=GCA008085315_01540_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005544956.1,SO:0001217,UniParc:UPI0001B9F868,UniRef:UniRef100_UPI0001B9F868,UniRef:UniRef50_Q8E9M0,UniRef:UniRef90_A0A3S4S3X0;ec_number=3.6.1.23 contig_20 Pyrodigal gene 110511 111710 . - . ID=GCA008085315_01541_gene;locus_tag=GCA008085315_01541;gene=coaBC contig_20 Pyrodigal CDS 110511 111710 . - 0 ID=GCA008085315_01541;Name=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;locus_tag=GCA008085315_01541;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;Dbxref=GO:0004632,GO:0004633,GO:0010181,GO:0015937,GO:0015941;gene=coaBC;Parent=GCA008085315_01541_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0452,COG:H,RefSeq:WP_148320952.1,SO:0001217,UniParc:UPI0011DB7EEF,UniRef:UniRef100_UPI0011DB7EEF,UniRef:UniRef50_P44953,UniRef:UniRef90_A0A5D0ENJ5;ec_number=6.3.2.5 contig_20 Pyrodigal gene 111888 112271 . + . ID=GCA008085315_01542_gene;locus_tag=GCA008085315_01542;gene=radC contig_20 Pyrodigal CDS 111888 112271 . + 0 ID=GCA008085315_01542;Name=DNA repair protein RadC;locus_tag=GCA008085315_01542;product=DNA repair protein RadC;gene=radC;Parent=GCA008085315_01542_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A4N1P4 contig_20 Pyrodigal gene 112323 112547 . + . ID=GCA008085315_01543_gene;locus_tag=GCA008085315_01543 contig_20 Pyrodigal CDS 112323 112547 . + 0 ID=GCA008085315_01543;Name=DNA repair protein radC-like protein;locus_tag=GCA008085315_01543;product=DNA repair protein radC-like protein;Parent=GCA008085315_01543_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_F4GTR2 contig_20 Pyrodigal gene 112756 112992 . + . ID=GCA008085315_01544_gene;locus_tag=GCA008085315_01544;gene=rpmB contig_20 Pyrodigal CDS 112756 112992 . + 0 ID=GCA008085315_01544;Name=50S ribosomal protein L28;locus_tag=GCA008085315_01544;product=50S ribosomal protein L28;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0022625;gene=rpmB;Parent=GCA008085315_01544_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0227,COG:J,RefSeq:WP_012820861.1,SO:0001217,UniParc:UPI0001B9F864,UniRef:UniRef100_UPI0001B9F864,UniRef:UniRef50_P44364,UniRef:UniRef90_P44364 contig_20 Pyrodigal gene 113004 113174 . + . ID=GCA008085315_01545_gene;locus_tag=GCA008085315_01545;gene=rpmG contig_20 Pyrodigal CDS 113004 113174 . + 0 ID=GCA008085315_01545;Name=50S ribosomal protein L33;locus_tag=GCA008085315_01545;product=50S ribosomal protein L33;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0022625;gene=rpmG;Parent=GCA008085315_01545_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0267,COG:J,KEGG:K02913,RefSeq:WP_005544948.1,SO:0001217,UniParc:UPI0001AADF0B,UniRef:UniRef100_A0A4R1L0I8,UniRef:UniRef50_Q0K7B1,UniRef:UniRef90_P44369 contig_20 Pyrodigal gene 113256 114071 . + . ID=GCA008085315_01546_gene;locus_tag=GCA008085315_01546;gene=mutM contig_20 Pyrodigal CDS 113256 114071 . + 0 ID=GCA008085315_01546;Name=DNA-formamidopyrimidine glycosylase;locus_tag=GCA008085315_01546;product=DNA-formamidopyrimidine glycosylase;Dbxref=GO:0005737,GO:0006281,GO:0008534,GO:0046872;gene=mutM;Parent=GCA008085315_01546_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0266,COG:L,KEGG:K10563,RefSeq:WP_005544946.1,SO:0001217,UniParc:UPI00022BFDE5,UniRef:UniRef100_UPI00022BFDE5,UniRef:UniRef50_P05523,UniRef:UniRef90_G4A5L6;ec_number=4.2.99.18 contig_20 Pyrodigal gene 114074 115126 . - . ID=GCA008085315_01547_gene;locus_tag=GCA008085315_01547;gene=rfaF contig_20 Pyrodigal CDS 114074 115126 . - 0 ID=GCA008085315_01547;Name=Formamidopyrimidine-DNA glycosylase;locus_tag=GCA008085315_01547;product=Formamidopyrimidine-DNA glycosylase;gene=rfaF;Parent=GCA008085315_01547_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0859,COG:M,RefSeq:WP_005544945.1,SO:0001217,UniParc:UPI0001B9F862,UniRef:UniRef100_UPI0001B9F862,UniRef:UniRef50_A0A142G016,UniRef:UniRef90_A0A142G016 contig_20 Pyrodigal gene 115136 116158 . - . ID=GCA008085315_01548_gene;locus_tag=GCA008085315_01548;gene=rfaF contig_20 Pyrodigal CDS 115136 116158 . - 0 ID=GCA008085315_01548;Name=Glycosyltransferase family 9 protein;locus_tag=GCA008085315_01548;product=Glycosyltransferase family 9 protein;gene=rfaF;Parent=GCA008085315_01548_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0859,COG:M,RefSeq:WP_148320953.1,SO:0001217,UniParc:UPI0011DBEE2B,UniRef:UniRef100_UPI0011DBEE2B,UniRef:UniRef50_A0A377IX16,UniRef:UniRef90_A0A5D0ENK2 contig_20 Pyrodigal gene 116159 116851 . - . ID=GCA008085315_01549_gene;locus_tag=GCA008085315_01549 contig_20 Pyrodigal CDS 116159 116851 . - 0 ID=GCA008085315_01549;Name=Beta-1%2C4-galactosyltransferase;locus_tag=GCA008085315_01549;product=Beta-1%2C4-galactosyltransferase;Parent=GCA008085315_01549_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3306,COG:M,RefSeq:WP_005544941.1,SO:0001217,UniParc:UPI0001B9F860,UniRef:UniRef100_UPI0001B9F860,UniRef:UniRef50_A0A077DFM0,UniRef:UniRef90_A0A142G014 contig_20 Pyrodigal gene 116914 117126 . - . ID=GCA008085315_01550_gene;locus_tag=GCA008085315_01550;gene=rpmE contig_20 Pyrodigal CDS 116914 117126 . - 0 ID=GCA008085315_01550;Name=50S ribosomal protein L31;locus_tag=GCA008085315_01550;product=50S ribosomal protein L31;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:0046872,GO:1990904;gene=rpmE;Parent=GCA008085315_01550_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0254,COG:J,RefSeq:WP_005542845.1,SO:0001217,UniParc:UPI0001B9F85F,UniRef:UniRef100_A0A142G013,UniRef:UniRef50_P0A7M9,UniRef:UniRef90_P44367 contig_20 Infernal regulatory_region 117132 117194 3.8e-06 - . ID=FFLMJBKAJI_103;Name=L31-Gammaproteobacteria ribosomal protein leader;product=L31-Gammaproteobacteria ribosomal protein leader;Dbxref=RFAM:RF03157;inference=profile:Rfam:RF03157;Note=SO:0000140;regulatory_class=attenuator contig_20 Pyrodigal gene 117384 118232 . + . ID=GCA008085315_01551_gene;locus_tag=GCA008085315_01551 contig_20 Pyrodigal CDS 117384 118232 . + 0 ID=GCA008085315_01551;Name=Glycosyltransferase family 25 protein;locus_tag=GCA008085315_01551;product=Glycosyltransferase family 25 protein;Parent=GCA008085315_01551_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3306,COG:M,RefSeq:WP_148320954.1,SO:0001217,UniParc:UPI0011DBE6D5,UniRef:UniRef100_UPI0011DBE6D5,UniRef:UniRef50_A0A0H3PBV4,UniRef:UniRef90_A0A5D0ENI3 contig_20 Pyrodigal gene 118241 119245 . + . ID=GCA008085315_01552_gene;locus_tag=GCA008085315_01552;gene=oCH1 contig_20 Pyrodigal CDS 118241 119245 . + 0 ID=GCA008085315_01552;Name=Capsular biosynthesis protein;locus_tag=GCA008085315_01552;product=Capsular biosynthesis protein;gene=oCH1;Parent=GCA008085315_01552_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3774,COG:M,RefSeq:WP_012820859.1,SO:0001217,UniParc:UPI0001B9F85C,UniRef:UniRef100_UPI0001B9F85C,UniRef:UniRef50_A0A142G011,UniRef:UniRef90_A0A142G011 contig_20 Pyrodigal gene 119252 120115 . - . ID=GCA008085315_01553_gene;locus_tag=GCA008085315_01553;gene=yibB contig_20 Pyrodigal CDS 119252 120115 . - 0 ID=GCA008085315_01553;Name=protein YibB;locus_tag=GCA008085315_01553;product=protein YibB;gene=yibB;Parent=GCA008085315_01553_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005542853.1,SO:0001217,UniParc:UPI0001B9F85B,UniRef:UniRef100_A0A142G010,UniRef:UniRef50_A0A3P1W2J1,UniRef:UniRef90_A0A142G010 contig_20 Pyrodigal gene 120171 122540 . + . ID=GCA008085315_01554_gene;locus_tag=GCA008085315_01554;gene=priA contig_20 Pyrodigal CDS 120171 122540 . + 0 ID=GCA008085315_01554;Name=primosomal protein N';locus_tag=GCA008085315_01554;product=primosomal protein N';gene=priA;Parent=GCA008085315_01554_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1198,COG:L,KEGG:K04066,SO:0001217,UniRef:UniRef50_P44647,UniRef:UniRef90_A0A5D0ENH4;ec_number=5.6.2.4 contig_20 Pyrodigal gene 122650 123462 . + . ID=GCA008085315_01555_gene;locus_tag=GCA008085315_01555;gene=ftsN contig_20 Pyrodigal CDS 122650 123462 . + 0 ID=GCA008085315_01555;Name=cell division protein FtsN;locus_tag=GCA008085315_01555;product=cell division protein FtsN;Dbxref=GO:0000910,GO:0005515;gene=ftsN;Parent=GCA008085315_01555_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3087,COG:D,RefSeq:WP_005544930.1,SO:0001217,UniParc:UPI0001B9F859,UniRef:UniRef100_UPI0001B9F859,UniRef:UniRef50_A0A377IXV2,UniRef:UniRef90_A0A142G008 contig_20 Pyrodigal gene 123662 124228 . + . ID=GCA008085315_01556_gene;locus_tag=GCA008085315_01556;gene=acrR contig_20 Pyrodigal CDS 123662 124228 . + 0 ID=GCA008085315_01556;Name=TetR family transcriptional regulator;locus_tag=GCA008085315_01556;product=TetR family transcriptional regulator;gene=acrR;Parent=GCA008085315_01556_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1309,COG:K,KEGG:K18136,RefSeq:WP_005544928.1,SO:0001217,UniParc:UPI0001B9F858,UniRef:UniRef100_UPI0001B9F858,UniRef:UniRef50_P44923,UniRef:UniRef90_A0A142G007 contig_20 Pyrodigal gene 124254 125444 . + . ID=GCA008085315_01557_gene;locus_tag=GCA008085315_01557;gene=acrA contig_20 Pyrodigal CDS 124254 125444 . + 0 ID=GCA008085315_01557;Name=Multidrug resistance protein mexA;locus_tag=GCA008085315_01557;product=Multidrug resistance protein mexA;gene=acrA;Parent=GCA008085315_01557_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0845,COG:MV,RefSeq:WP_005544926.1,SO:0001217,UniParc:UPI0001B9F857,UniRef:UniRef100_UPI0001B9F857,UniRef:UniRef50_Q57500,UniRef:UniRef90_A0A3S4Q541 contig_20 Pyrodigal gene 125458 128556 . + . ID=GCA008085315_01558_gene;locus_tag=GCA008085315_01558;gene=acrB contig_20 Pyrodigal CDS 125458 128556 . + 0 ID=GCA008085315_01558;Name=RND superfamily acriflavine resistance protein B;locus_tag=GCA008085315_01558;product=RND superfamily acriflavine resistance protein B;gene=acrB;Parent=GCA008085315_01558_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0841,COG:V,RefSeq:WP_148320955.1,SO:0001217,UniParc:UPI0011D8EABA,UniRef:UniRef100_UPI0011D8EABA,UniRef:UniRef50_Q57124,UniRef:UniRef90_E6KVP7 contig_20 Pyrodigal gene 128709 129509 . + . ID=GCA008085315_01559_gene;locus_tag=GCA008085315_01559;gene=trmA contig_20 Pyrodigal CDS 128709 129509 . + 0 ID=GCA008085315_01559;Name=Methyltransferase domain-containing protein;locus_tag=GCA008085315_01559;product=Methyltransferase domain-containing protein;gene=trmA;Parent=GCA008085315_01559_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2265,COG:J,RefSeq:WP_005544922.1,SO:0001217,UniParc:UPI0001B9F80D,UniRef:UniRef100_UPI0001B9F80D,UniRef:UniRef50_P44150,UniRef:UniRef90_A0AAC8XYK0 contig_20 Infernal gene 129829 129946 . + . ID=GCA008085315_01560_gene;locus_tag=GCA008085315_01560;gene=AaHKsRNA54 contig_20 Infernal ncRNA 129829 129946 7.6e-23 + . ID=GCA008085315_01560;Name=Aggregatibacter sRNA 54;locus_tag=GCA008085315_01560;product=Aggregatibacter sRNA 54;Dbxref=RFAM:RF02899;Parent=GCA008085315_01560_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02899 contig_20 Pyrodigal gene 130162 131109 . + . ID=GCA008085315_01561_gene;locus_tag=GCA008085315_01561;gene=corA contig_20 Pyrodigal CDS 130162 131109 . + 0 ID=GCA008085315_01561;Name=magnesium/cobalt transporter CorA;locus_tag=GCA008085315_01561;product=magnesium/cobalt transporter CorA;Dbxref=GO:0005886,GO:0006824,GO:0015087,GO:0015095,GO:0015099,GO:0015693,GO:0016020;gene=corA;Parent=GCA008085315_01561_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0598,COG:P,RefSeq:WP_005540755.1,SO:0001217,UniParc:UPI0001B9F80C,UniRef:UniRef100_A0A142FZE5,UniRef:UniRef50_P0A2R8,UniRef:UniRef90_Q9CLC4 contig_20 Pyrodigal gene 131125 131685 . + . ID=GCA008085315_01562_gene;locus_tag=GCA008085315_01562;gene=yggT contig_20 Pyrodigal CDS 131125 131685 . + 0 ID=GCA008085315_01562;Name=YggT family protein;locus_tag=GCA008085315_01562;product=YggT family protein;gene=yggT;Parent=GCA008085315_01562_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0762,COG:O,KEGG:K02221,RefSeq:WP_148320956.1,SO:0001217,UniParc:UPI0011DC676F,UniRef:UniRef100_UPI0011DC676F,UniRef:UniRef50_F4HCI2,UniRef:UniRef90_A0A142FZE6 contig_20 Pyrodigal gene 131711 132004 . + . ID=GCA008085315_01563_gene;locus_tag=GCA008085315_01563;gene=yggU contig_20 Pyrodigal CDS 131711 132004 . + 0 ID=GCA008085315_01563;Name=DUF167 domain-containing protein;locus_tag=GCA008085315_01563;product=DUF167 domain-containing protein;gene=yggU;Parent=GCA008085315_01563_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1872,COG:S,KEGG:K09131,RefSeq:WP_005544919.1,SO:0001217,UniParc:UPI0001B9F80A,UniRef:UniRef100_UPI0001B9F80A,UniRef:UniRef50_Q9CLC6,UniRef:UniRef90_A0A5D0EKC4 contig_20 Pyrodigal gene 132121 132780 . + . ID=GCA008085315_01564_gene;locus_tag=GCA008085315_01564 contig_20 Pyrodigal CDS 132121 132780 . + 0 ID=GCA008085315_01564;Name=NAD(P)H-flavin oxidoreductase;locus_tag=GCA008085315_01564;product=NAD(P)H-flavin oxidoreductase;Parent=GCA008085315_01564_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005544916.1,SO:0001217,UniParc:UPI0001B9F809,UniRef:UniRef100_UPI0001B9F809,UniRef:UniRef50_Q57431,UniRef:UniRef90_E6KVQ3 contig_20 Pyrodigal gene 132845 134818 . + . ID=GCA008085315_01565_gene;locus_tag=GCA008085315_01565 contig_20 Pyrodigal CDS 132845 134818 . + 0 ID=GCA008085315_01565;Name=Lipoteichoic acid synthase 1;locus_tag=GCA008085315_01565;product=Lipoteichoic acid synthase 1;Parent=GCA008085315_01565_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148320957.1,SO:0001217,UniParc:UPI0011D5DBE2,UniRef:UniRef100_UPI0011D5DBE2,UniRef:UniRef50_P44135,UniRef:UniRef90_A0A3S4QRU3 contig_20 Pyrodigal gene 134988 135725 . - . ID=GCA008085315_01566_gene;locus_tag=GCA008085315_01566;gene=pgeF contig_20 Pyrodigal CDS 134988 135725 . - 0 ID=GCA008085315_01566;Name=peptidoglycan editing factor PgeF;locus_tag=GCA008085315_01566;product=peptidoglycan editing factor PgeF;gene=pgeF;Parent=GCA008085315_01566_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1496,COG:P,KEGG:K05810,RefSeq:WP_148320958.1,SO:0001217,UniParc:UPI0011DB0EF7,UniRef:UniRef100_UPI0011DB0EF7,UniRef:UniRef50_P44552,UniRef:UniRef90_A0A5D0EKB1;ec_number=3.5.4.4 contig_20 Pyrodigal gene 135727 136701 . - . ID=GCA008085315_01567_gene;locus_tag=GCA008085315_01567;gene=rluD contig_20 Pyrodigal CDS 135727 136701 . - 0 ID=GCA008085315_01567;Name=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;locus_tag=GCA008085315_01567;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;Dbxref=GO:0001522,GO:0003723,GO:0009451,GO:0009982;gene=rluD;Parent=GCA008085315_01567_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0564,COG:J,KEGG:K06180,RefSeq:WP_005544910.1,SO:0001217,UniParc:UPI0001B9F806,UniRef:UniRef100_UPI0001B9F806,UniRef:UniRef50_P44445,UniRef:UniRef90_A0A142FZF3;ec_number=5.4.99.23 contig_20 Pyrodigal gene 136808 137596 . + . ID=GCA008085315_01568_gene;locus_tag=GCA008085315_01568;gene=bamD contig_20 Pyrodigal CDS 136808 137596 . + 0 ID=GCA008085315_01568;Name=Outer membrane protein assembly factor BamD;locus_tag=GCA008085315_01568;product=Outer membrane protein assembly factor BamD;gene=bamD;Parent=GCA008085315_01568_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4105,COG:M,RefSeq:WP_005544908.1,SO:0001217,UniParc:UPI0001B9F805,UniRef:UniRef100_UPI0001B9F805,UniRef:UniRef50_P44553,UniRef:UniRef90_E6KZN9 contig_20 Pyrodigal gene 137632 138207 . - . ID=GCA008085315_01569_gene;locus_tag=GCA008085315_01569;gene=fAU1 contig_20 Pyrodigal CDS 137632 138207 . - 0 ID=GCA008085315_01569;Name=5-formyltetrahydrofolate cyclo-ligase;locus_tag=GCA008085315_01569;product=5-formyltetrahydrofolate cyclo-ligase;Dbxref=GO:0006730,GO:0030272;gene=fAU1;Parent=GCA008085315_01569_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0212,COG:H,KEGG:K01807,RefSeq:WP_005544906.1,SO:0001217,UniParc:UPI0001B9F804,UniRef:UniRef100_UPI0001B9F804,UniRef:UniRef50_A0A376D9R5,UniRef:UniRef90_A0A5D0ELL0;ec_number=6.3.3.2 contig_20 Infernal gene 138223 138406 . - . ID=GCA008085315_01570_gene;locus_tag=GCA008085315_01570;gene=6S contig_20 Infernal ncRNA 138223 138406 3.5e-24 - . ID=GCA008085315_01570;Name=6S / SsrS RNA;locus_tag=GCA008085315_01570;product=6S / SsrS RNA;Dbxref=RFAM:RF00013;Parent=GCA008085315_01570_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF00013 contig_20 Pyrodigal gene 138501 138827 . - . ID=GCA008085315_01571_gene;locus_tag=GCA008085315_01571;gene=zapA contig_20 Pyrodigal CDS 138501 138827 . - 0 ID=GCA008085315_01571;Name=Cell division protein ZapA;locus_tag=GCA008085315_01571;product=Cell division protein ZapA;gene=zapA;Parent=GCA008085315_01571_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3027,COG:D,SO:0001217,UniParc:UPI0001B9F803,UniRef:UniRef100_G4A657,UniRef:UniRef50_Q65VC6,UniRef:UniRef90_G4A657 contig_20 Pyrodigal gene 138986 139534 . + . ID=GCA008085315_01572_gene;locus_tag=GCA008085315_01572;gene=ygfB contig_20 Pyrodigal CDS 138986 139534 . + 0 ID=GCA008085315_01572;Name=UPF0149 protein ACT75_04235;locus_tag=GCA008085315_01572;product=UPF0149 protein ACT75_04235;gene=ygfB;Parent=GCA008085315_01572_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3079,COG:S,KEGG:K09895,RefSeq:WP_148320959.1,SO:0001217,UniParc:UPI0011D92548,UniRef:UniRef100_UPI0011D92548,UniRef:UniRef50_P44882,UniRef:UniRef90_A0A5D0EKY6 contig_20 Pyrodigal gene 139549 140850 . + . ID=GCA008085315_01573_gene;locus_tag=GCA008085315_01573;gene=pepP contig_20 Pyrodigal CDS 139549 140850 . + 0 ID=GCA008085315_01573;Name=Xaa-Pro aminopeptidase;locus_tag=GCA008085315_01573;product=Xaa-Pro aminopeptidase;Dbxref=GO:0070006;gene=pepP;Parent=GCA008085315_01573_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0006,COG:E,KEGG:K01262,RefSeq:WP_019518182.1,SO:0001217,UniParc:UPI000348AA9E,UniRef:UniRef100_UPI000348AA9E,UniRef:UniRef50_P15034,UniRef:UniRef90_E6KZN5;ec_number=3.4.11.9 contig_20 Pyrodigal gene 141345 141593 . + . ID=GCA008085315_01574_gene;locus_tag=GCA008085315_01574;gene=rpsP contig_20 Pyrodigal CDS 141345 141593 . + 0 ID=GCA008085315_01574;Name=30S ribosomal protein S16;locus_tag=GCA008085315_01574;product=30S ribosomal protein S16;Dbxref=GO:0000314,GO:0003735,GO:0005737,GO:0006412,GO:0015935,GO:0022627;gene=rpsP;Parent=GCA008085315_01574_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0228,COG:J,RefSeq:WP_005540791.1,SO:0001217,UniParc:UPI0001B9F7FE,UniRef:UniRef100_A0A142FZF9,UniRef:UniRef50_P44382,UniRef:UniRef90_P44382 contig_20 Pyrodigal gene 141619 142146 . + . ID=GCA008085315_01575_gene;locus_tag=GCA008085315_01575;gene=rimM contig_20 Pyrodigal CDS 141619 142146 . + 0 ID=GCA008085315_01575;Name=ribosome maturation factor RimM;locus_tag=GCA008085315_01575;product=ribosome maturation factor RimM;Dbxref=GO:0005737,GO:0005840,GO:0006364,GO:0042274,GO:0043022;gene=rimM;Parent=GCA008085315_01575_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0806,COG:J,RefSeq:WP_005544897.1,SO:0001217,UniParc:UPI0001B9F7FD,UniRef:UniRef100_UPI0001B9F7FD,UniRef:UniRef50_P0A7X6,UniRef:UniRef90_Q4QNY7 contig_20 Pyrodigal gene 142212 142961 . + . ID=GCA008085315_01576_gene;locus_tag=GCA008085315_01576;gene=trmD contig_20 Pyrodigal CDS 142212 142961 . + 0 ID=GCA008085315_01576;Name=tRNA (guanosine(37)-N1)-methyltransferase TrmD;locus_tag=GCA008085315_01576;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;Dbxref=GO:0030488,GO:0052906;gene=trmD;Parent=GCA008085315_01576_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0336,COG:J,RefSeq:WP_005544895.1,SO:0001217,UniParc:UPI0001B9F7FC,UniRef:UniRef100_UPI0001B9F7FC,UniRef:UniRef50_P43912,UniRef:UniRef90_A0A142FZG1;ec_number=2.1.1.228 contig_20 Pyrodigal gene 142987 143337 . + . ID=GCA008085315_01577_gene;locus_tag=GCA008085315_01577;gene=rplS contig_20 Pyrodigal CDS 142987 143337 . + 0 ID=GCA008085315_01577;Name=50S ribosomal protein L19;locus_tag=GCA008085315_01577;product=50S ribosomal protein L19;Dbxref=GO:0000311,GO:0003735,GO:0006412,GO:0022625;gene=rplS;Parent=GCA008085315_01577_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0335,COG:J,KEGG:K02884,RefSeq:WP_005540794.1,SO:0001217,UniParc:UPI0001B9F7FB,UniRef:UniRef100_UPI0001B9F7FB,UniRef:UniRef50_Q9CLE0,UniRef:UniRef90_Q9CLE0 contig_20 Pyrodigal gene 143447 143935 . - . ID=GCA008085315_01578_gene;locus_tag=GCA008085315_01578;gene=mreD contig_20 Pyrodigal CDS 143447 143935 . - 0 ID=GCA008085315_01578;Name=rod shape-determining protein MreD;locus_tag=GCA008085315_01578;product=rod shape-determining protein MreD;Dbxref=GO:0008360,GO:0016020;gene=mreD;Parent=GCA008085315_01578_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2891,COG:M,RefSeq:WP_005544893.1,SO:0001217,UniParc:UPI0001B9F7FA,UniRef:UniRef100_G4A649,UniRef:UniRef50_Q7VLV4,UniRef:UniRef90_A0A5D0EKI0 contig_20 Pyrodigal gene 143935 145008 . - . ID=GCA008085315_01579_gene;locus_tag=GCA008085315_01579;gene=mreC contig_20 Pyrodigal CDS 143935 145008 . - 0 ID=GCA008085315_01579;Name=rod shape-determining protein MreC;locus_tag=GCA008085315_01579;product=rod shape-determining protein MreC;Dbxref=GO:0008360;gene=mreC;Parent=GCA008085315_01579_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1792,COG:DZ,KEGG:K03570,RefSeq:WP_005544891.1,SO:0001217,UniParc:UPI0001B9F7F9,UniRef:UniRef100_UPI0001B9F7F9,UniRef:UniRef50_P44475,UniRef:UniRef90_G4A648 contig_20 Pyrodigal gene 145078 146133 . - . ID=GCA008085315_01580_gene;locus_tag=GCA008085315_01580;gene=mreB contig_20 Pyrodigal CDS 145078 146133 . - 0 ID=GCA008085315_01580;Name=Cell shape-determining protein MreB;locus_tag=GCA008085315_01580;product=Cell shape-determining protein MreB;Dbxref=GO:0000902,GO:0005524,GO:0005737,GO:0008360;gene=mreB;Parent=GCA008085315_01580_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1077,COG:DZ,RefSeq:WP_005540797.1,SO:0001217,UniParc:UPI0001B9F7F8,UniRef:UniRef100_A0A142FZG5,UniRef:UniRef50_P0A9X4,UniRef:UniRef90_P44474 contig_20 Pyrodigal gene 146383 148788 . + . ID=GCA008085315_01581_gene;locus_tag=GCA008085315_01581;gene=rnr contig_20 Pyrodigal CDS 146383 148788 . + 0 ID=GCA008085315_01581;Name=ribonuclease R;locus_tag=GCA008085315_01581;product=ribonuclease R;Dbxref=GO:0004540,GO:0016070;gene=rnr;Parent=GCA008085315_01581_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0557,COG:K,KEGG:K12573,RefSeq:WP_148320960.1,SO:0001217,UniParc:UPI0011D6F0F9,UniRef:UniRef100_UPI0011D6F0F9,UniRef:UniRef50_P44907,UniRef:UniRef90_E6KZM7;ec_number=3.1.13.1 contig_20 Pyrodigal gene 148785 149522 . + . ID=GCA008085315_01582_gene;locus_tag=GCA008085315_01582;gene=rlmB contig_20 Pyrodigal CDS 148785 149522 . + 0 ID=GCA008085315_01582;Name=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;locus_tag=GCA008085315_01582;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;Dbxref=GO:0003723,GO:0006396,GO:0008173;gene=rlmB;Parent=GCA008085315_01582_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0566,COG:J,RefSeq:WP_005544885.1,SO:0001217,UniParc:UPI0001B9F7F6,UniRef:UniRef100_UPI0001B9F7F6,UniRef:UniRef50_Q9CJP3,UniRef:UniRef90_A0A336N7J3;ec_number=2.1.1.185 contig_20 Pyrodigal gene 149854 151296 . + . ID=GCA008085315_01583_gene;locus_tag=GCA008085315_01583;gene=glpT contig_20 Pyrodigal CDS 149854 151296 . + 0 ID=GCA008085315_01583;Name=glycerol-3-phosphate transporter;locus_tag=GCA008085315_01583;product=glycerol-3-phosphate transporter;Dbxref=GO:0005886,GO:0006071,GO:0015169,GO:0015760,GO:0015794,GO:0016020,GO:0035435,GO:0061513;gene=glpT;Parent=GCA008085315_01583_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2271,COG:G,RefSeq:WP_005544881.1,SO:0001217,UniParc:UPI00022ACA84,UniRef:UniRef100_UPI00022ACA84,UniRef:UniRef50_P37948,UniRef:UniRef90_P96335 contig_20 Pyrodigal gene 151530 152612 . + . ID=GCA008085315_01584_gene;locus_tag=GCA008085315_01584;gene=glpQ contig_20 Pyrodigal CDS 151530 152612 . + 0 ID=GCA008085315_01584;Name=glycerophosphodiester phosphodiesterase;locus_tag=GCA008085315_01584;product=glycerophosphodiester phosphodiesterase;Dbxref=GO:0006629,GO:0008081;gene=glpQ;Parent=GCA008085315_01584_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0584,COG:I,KEGG:K01126,RefSeq:WP_005544880.1,SO:0001217,UniParc:UPI0001B9F7F3,UniRef:UniRef100_UPI0001B9F7F3,UniRef:UniRef50_Q06282,UniRef:UniRef90_F0EQE6;ec_number=3.1.4.46 contig_20 Pyrodigal gene 152669 153787 . - . ID=GCA008085315_01585_gene;locus_tag=GCA008085315_01585;gene=dprA contig_20 Pyrodigal CDS 152669 153787 . - 0 ID=GCA008085315_01585;Name=DNA-processing protein DprA;locus_tag=GCA008085315_01585;product=DNA-processing protein DprA;Dbxref=GO:0009294;gene=dprA;Parent=GCA008085315_01585_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0758,COG:L,RefSeq:WP_005544878.1,SO:0001217,UniParc:UPI0001B9F7F2,UniRef:UniRef100_UPI0001B9F7F2,UniRef:UniRef50_P43862,UniRef:UniRef90_A0A142FZH0 contig_20 Pyrodigal gene 154007 154456 . - . ID=GCA008085315_01586_gene;locus_tag=GCA008085315_01586;gene=rplI contig_20 Pyrodigal CDS 154007 154456 . - 0 ID=GCA008085315_01586;Name=50S ribosomal protein L9;locus_tag=GCA008085315_01586;product=50S ribosomal protein L9;Dbxref=GO:0003735,GO:0005840,GO:0006412;gene=rplI;Parent=GCA008085315_01586_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0359,COG:J,KEGG:K02939,RefSeq:WP_005544876.1,SO:0001217,UniParc:UPI0001B9F7F1,UniRef:UniRef100_UPI0001B9F7F1,UniRef:UniRef50_P44349,UniRef:UniRef90_E6KVQ9 contig_20 Pyrodigal gene 154472 154702 . - . ID=GCA008085315_01587_gene;locus_tag=GCA008085315_01587;gene=rpsR contig_20 Pyrodigal CDS 154472 154702 . - 0 ID=GCA008085315_01587;Name=30S ribosomal protein S18;locus_tag=GCA008085315_01587;product=30S ribosomal protein S18;Dbxref=GO:0000314,GO:0003735,GO:0006412,GO:0022627,GO:0070181;gene=rpsR;Parent=GCA008085315_01587_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0238,COG:J,KEGG:K02963,RefSeq:WP_005541294.1,SO:0001217,UniParc:UPI0001AADF58,UniRef:UniRef100_E6KVR0,UniRef:UniRef50_P66457,UniRef:UniRef90_P66457 contig_20 Pyrodigal gene 154715 155041 . - . ID=GCA008085315_01588_gene;locus_tag=GCA008085315_01588;gene=priB contig_20 Pyrodigal CDS 154715 155041 . - 0 ID=GCA008085315_01588;Name=primosomal replication protein N;locus_tag=GCA008085315_01588;product=primosomal replication protein N;Dbxref=GO:0003697,GO:0006260,GO:0030894;gene=priB;Parent=GCA008085315_01588_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2965,COG:L,RefSeq:WP_005544874.1,SO:0001217,UniParc:UPI0001B9F7F0,UniRef:UniRef100_UPI0001B9F7F0,UniRef:UniRef50_P07013,UniRef:UniRef90_A0A5D0EKJ0 contig_20 Pyrodigal gene 155028 155405 . - . ID=GCA008085315_01589_gene;locus_tag=GCA008085315_01589;gene=rpsF contig_20 Pyrodigal CDS 155028 155405 . - 0 ID=GCA008085315_01589;Name=30S ribosomal protein S6;locus_tag=GCA008085315_01589;product=30S ribosomal protein S6;Dbxref=GO:0000314,GO:0003735,GO:0006412,GO:0022627,GO:0070181;gene=rpsF;Parent=GCA008085315_01589_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0360,COG:J,KEGG:K02990,RefSeq:WP_005541284.1,SO:0001217,UniParc:UPI0001B9F7EF,UniRef:UniRef100_A0A142FZH4,UniRef:UniRef50_P44375,UniRef:UniRef90_P44375 contig_20 Infernal regulatory_region 155403 155488 6e-07 - . ID=FFLMJBKAJI_102;Name=RpsF leader;product=RpsF leader;Dbxref=RFAM:RF02893;inference=profile:Rfam:RF02893;Note=SO:0000140;regulatory_class=attenuator contig_20 Pyrodigal gene 155557 156180 . - . ID=GCA008085315_01590_gene;locus_tag=GCA008085315_01590;gene=lexA contig_20 Pyrodigal CDS 155557 156180 . - 0 ID=GCA008085315_01590;Name=transcriptional repressor LexA;locus_tag=GCA008085315_01590;product=transcriptional repressor LexA;Dbxref=GO:0004252,GO:0009432,GO:0045892;gene=lexA;Parent=GCA008085315_01590_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1974,COG:KT,KEGG:K01356,RefSeq:WP_148333982.1,SO:0001217,UniParc:UPI0011DA74BF,UniRef:UniRef100_UPI0011DA74BF,UniRef:UniRef50_Q65UK9,UniRef:UniRef90_E6KVR3;ec_number=3.4.21.88 contig_20 Pyrodigal gene 156388 158826 . + . ID=GCA008085315_01591_gene;locus_tag=GCA008085315_01591;gene=plsB contig_20 Pyrodigal CDS 156388 158826 . + 0 ID=GCA008085315_01591;Name=glycerol-3-phosphate 1-O-acyltransferase PlsB;locus_tag=GCA008085315_01591;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;Dbxref=GO:0004366,GO:0008654;gene=plsB;Parent=GCA008085315_01591_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2937,COG:I,KEGG:K00631,RefSeq:WP_005544871.1,SO:0001217,UniParc:UPI0001B9F7EC,UniRef:UniRef100_UPI0001B9F7EC,UniRef:UniRef50_P44857,UniRef:UniRef90_G4A633;ec_number=2.3.1.15 contig_20 Pyrodigal gene 158867 160711 . - . ID=GCA008085315_01592_gene;locus_tag=GCA008085315_01592;gene=mdlB contig_20 Pyrodigal CDS 158867 160711 . - 0 ID=GCA008085315_01592;Name=Multidrug ABC superfamily ATP binding cassette transporter%2C ABC protein;locus_tag=GCA008085315_01592;product=Multidrug ABC superfamily ATP binding cassette transporter%2C ABC protein;gene=mdlB;Parent=GCA008085315_01592_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1132,COG:V,RefSeq:WP_005544869.1,SO:0001217,UniParc:UPI0001B9F7EB,UniRef:UniRef100_UPI0001B9F7EB,UniRef:UniRef50_Q57180,UniRef:UniRef90_E6KVG3 contig_20 Pyrodigal gene 160799 161716 . - . ID=GCA008085315_01593_gene;locus_tag=GCA008085315_01593;gene=glxA contig_20 Pyrodigal CDS 160799 161716 . - 0 ID=GCA008085315_01593;Name=AraC family transcriptional regulator;locus_tag=GCA008085315_01593;product=AraC family transcriptional regulator;gene=glxA;Parent=GCA008085315_01593_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4977,COG:K,KEGG:K18991,RefSeq:WP_005541277.1,SO:0001217,UniParc:UPI0001B9F7EA,UniRef:UniRef100_A0A5D0EKF2,UniRef:UniRef50_P45008,UniRef:UniRef90_A0A5D0EKF2 contig_20 Pyrodigal gene 161820 162161 . + . ID=GCA008085315_01594_gene;locus_tag=GCA008085315_01594;gene=yurZ contig_20 Pyrodigal CDS 161820 162161 . + 0 ID=GCA008085315_01594;Name=Alkylhydroperoxidase AhpD family core domain protein;locus_tag=GCA008085315_01594;product=Alkylhydroperoxidase AhpD family core domain protein;gene=yurZ;Parent=GCA008085315_01594_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0599,COG:R,RefSeq:WP_005544867.1,SO:0001217,UniParc:UPI0001B9F7E9,UniRef:UniRef100_UPI0001B9F7E9,UniRef:UniRef50_Q57498,UniRef:UniRef90_F0ERR3 contig_20 Pyrodigal gene 162258 163301 . - . ID=GCA008085315_01595_gene;locus_tag=GCA008085315_01595;gene=rfaF contig_20 Pyrodigal CDS 162258 163301 . - 0 ID=GCA008085315_01595;Name=Glycosyl transferase;locus_tag=GCA008085315_01595;product=Glycosyl transferase;gene=rfaF;Parent=GCA008085315_01595_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0859,COG:M,RefSeq:WP_005544864.1,SO:0001217,UniParc:UPI0001B9F7E8,UniRef:UniRef100_UPI0001B9F7E8,UniRef:UniRef50_Q57336,UniRef:UniRef90_A0A5D0EJI1 contig_20 Pyrodigal gene 163390 164115 . + . ID=GCA008085315_01596_gene;locus_tag=GCA008085315_01596;gene=bud32 contig_20 Pyrodigal CDS 163390 164115 . + 0 ID=GCA008085315_01596;Name=3-deoxy-D-manno-octulosonic acid kinase;locus_tag=GCA008085315_01596;product=3-deoxy-D-manno-octulosonic acid kinase;Dbxref=GO:0016773;gene=bud32;Parent=GCA008085315_01596_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3642,COG:J,KEGG:K11211,RefSeq:WP_148333983.1,SO:0001217,UniParc:UPI0011D4F9BE,UniRef:UniRef100_UPI0011D4F9BE,UniRef:UniRef50_O86224,UniRef:UniRef90_A0A5D0EJI5;ec_number=2.7.1.166 contig_20 Pyrodigal gene 164164 164658 . - . ID=GCA008085315_01597_gene;locus_tag=GCA008085315_01597;gene=coaD contig_20 Pyrodigal CDS 164164 164658 . - 0 ID=GCA008085315_01597;Name=pantetheine-phosphate adenylyltransferase;locus_tag=GCA008085315_01597;product=pantetheine-phosphate adenylyltransferase;Dbxref=GO:0004595,GO:0015937;gene=coaD;Parent=GCA008085315_01597_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0669,COG:H,KEGG:K00954,RefSeq:WP_005544861.1,SO:0001217,UniParc:UPI00022ACA7F,UniRef:UniRef100_UPI00022ACA7F,UniRef:UniRef50_E6KVF8,UniRef:UniRef90_E6KVF8;ec_number=2.7.7.3 contig_20 Pyrodigal gene 164659 165942 . - . ID=GCA008085315_01598_gene;locus_tag=GCA008085315_01598;gene=waaA contig_20 Pyrodigal CDS 164659 165942 . - 0 ID=GCA008085315_01598;Name=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;locus_tag=GCA008085315_01598;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;Dbxref=GO:0016740;gene=waaA;Parent=GCA008085315_01598_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1519,COG:M,KEGG:K02527,RefSeq:WP_005589073.1,SO:0001217,UniParc:UPI0001B9F7E5,UniRef:UniRef100_UPI0001B9F7E5,UniRef:UniRef50_P44806,UniRef:UniRef90_A0A5D0EKJ8;ec_number=2.4.99.15 contig_20 Pyrodigal gene 166041 166802 . + . ID=GCA008085315_01599_gene;locus_tag=GCA008085315_01599;gene=wcaA contig_20 Pyrodigal CDS 166041 166802 . + 0 ID=GCA008085315_01599;Name=Group 2 glycosyl transferase;locus_tag=GCA008085315_01599;product=Group 2 glycosyl transferase;gene=wcaA;Parent=GCA008085315_01599_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0463,COG:M,KEGG:K12984,RefSeq:WP_005544857.1,SO:0001217,UniParc:UPI0001B9F79B,UniRef:UniRef100_UPI0001B9F79B,UniRef:UniRef50_E6KVF6,UniRef:UniRef90_E6KVF6;ec_number=2.4.1.- contig_20 Pyrodigal gene 167498 168667 . - . ID=GCA008085315_01600_gene;locus_tag=GCA008085315_01600;gene=nlpD contig_20 Pyrodigal CDS 167498 168667 . - 0 ID=GCA008085315_01600;Name=murein hydrolase activator NlpD;locus_tag=GCA008085315_01600;product=murein hydrolase activator NlpD;gene=nlpD;Parent=GCA008085315_01600_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0739,COG:M,RefSeq:WP_005544855.1,SO:0001217,UniParc:UPI0001B9F799,UniRef:UniRef100_UPI0001B9F799,UniRef:UniRef50_P44833,UniRef:UniRef90_A0A142G184 contig_20 Pyrodigal gene 168684 168875 . - . ID=GCA008085315_01601_gene;locus_tag=GCA008085315_01601 contig_20 Pyrodigal CDS 168684 168875 . - 0 ID=GCA008085315_01601;Name=Outer membrane antigenic lipoprotein B;locus_tag=GCA008085315_01601;product=Outer membrane antigenic lipoprotein B;Parent=GCA008085315_01601_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005544854.1,SO:0001217,UniParc:UPI0001B9F798,UniRef:UniRef100_UPI0001B9F798,UniRef:UniRef50_P44040,UniRef:UniRef90_A0A5D0EMY8 contig_20 Pyrodigal gene 168890 169465 . - . ID=GCA008085315_01602_gene;locus_tag=GCA008085315_01602;gene=ygaA contig_20 Pyrodigal CDS 168890 169465 . - 0 ID=GCA008085315_01602;Name=DedA family protein;locus_tag=GCA008085315_01602;product=DedA family protein;gene=ygaA;Parent=GCA008085315_01602_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1238,COG:S,RefSeq:WP_005544852.1,SO:0001217,UniParc:UPI0001B9F797,UniRef:UniRef100_UPI0001B9F797,UniRef:UniRef50_P44832,UniRef:UniRef90_A0A5D0EMY7 contig_20 Pyrodigal gene 169493 170233 . - . ID=GCA008085315_01603_gene;locus_tag=GCA008085315_01603;gene=surE contig_20 Pyrodigal CDS 169493 170233 . - 0 ID=GCA008085315_01603;Name=5'/3'-nucleotidase SurE;locus_tag=GCA008085315_01603;product=5'/3'-nucleotidase SurE;Dbxref=GO:0008252;gene=surE;Parent=GCA008085315_01603_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0496,COG:L,KEGG:K03787,RefSeq:WP_005544850.1,SO:0001217,UniParc:UPI0000E1B941,UniRef:UniRef100_UPI0000E1B941,UniRef:UniRef50_Q9PF20,UniRef:UniRef90_A0A0K1N0S3;ec_number=3.1.3.6 contig_20 Pyrodigal gene 170266 171276 . - . ID=GCA008085315_01604_gene;locus_tag=GCA008085315_01604;gene=truD contig_20 Pyrodigal CDS 170266 171276 . - 0 ID=GCA008085315_01604;Name=tRNA pseudouridine(13) synthase TruD;locus_tag=GCA008085315_01604;product=tRNA pseudouridine(13) synthase TruD;Dbxref=GO:0001522,GO:0003723,GO:0009982;gene=truD;Parent=GCA008085315_01604_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0585,COG:J,KEGG:K06176,RefSeq:WP_005567122.1,SO:0001217,UniParc:UPI0000E1B940,UniRef:UniRef100_UPI0000E1B940,UniRef:UniRef50_P44039,UniRef:UniRef90_A0A5D0EN75;ec_number=5.4.99.27 contig_20 Pyrodigal gene 171273 171752 . - . ID=GCA008085315_01605_gene;locus_tag=GCA008085315_01605;gene=ispF contig_20 Pyrodigal CDS 171273 171752 . - 0 ID=GCA008085315_01605;Name=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;locus_tag=GCA008085315_01605;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;gene=ispF;Parent=GCA008085315_01605_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0245,COG:I,RefSeq:WP_148320962.1,SO:0001217,UniParc:UPI0011D4F235,UniRef:UniRef100_UPI0011D4F235,UniRef:UniRef50_P62617,UniRef:UniRef90_E6L0I8 contig_20 Pyrodigal gene 171749 172444 . - . ID=GCA008085315_01606_gene;locus_tag=GCA008085315_01606;gene=ispD contig_20 Pyrodigal CDS 171749 172444 . - 0 ID=GCA008085315_01606;Name=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;locus_tag=GCA008085315_01606;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;gene=ispD;Parent=GCA008085315_01606_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1211,COG:I,RefSeq:WP_005544843.1,SO:0001217,UniParc:UPI0001B9F795,UniRef:UniRef100_UPI0001B9F795,UniRef:UniRef50_P57953,UniRef:UniRef90_A0A5D0EMY9 contig_20 Pyrodigal gene 172444 172722 . - . ID=GCA008085315_01607_gene;locus_tag=GCA008085315_01607;gene=ftsB contig_20 Pyrodigal CDS 172444 172722 . - 0 ID=GCA008085315_01607;Name=cell division protein FtsB;locus_tag=GCA008085315_01607;product=cell division protein FtsB;gene=ftsB;Parent=GCA008085315_01607_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2919,COG:D,RefSeq:WP_005550726.1,SO:0001217,UniParc:UPI0001B9F794,UniRef:UniRef100_A0A142G177,UniRef:UniRef50_P44035,UniRef:UniRef90_A0A142G177 contig_20 Pyrodigal gene 172874 173548 . + . ID=GCA008085315_01608_gene;locus_tag=GCA008085315_01608;gene=rpe contig_20 Pyrodigal CDS 172874 173548 . + 0 ID=GCA008085315_01608;Name=ribulose-phosphate 3-epimerase;locus_tag=GCA008085315_01608;product=ribulose-phosphate 3-epimerase;Dbxref=GO:0004750,GO:0006098;gene=rpe;Parent=GCA008085315_01608_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0036,COG:G,KEGG:K01783,RefSeq:WP_005544839.1,SO:0001217,UniParc:UPI0001B9F793,UniRef:UniRef100_UPI0001B9F793,UniRef:UniRef50_A0A376Y1A7,UniRef:UniRef90_Q9CKJ6;ec_number=5.1.3.1 contig_20 Pyrodigal gene 173551 174225 . + . ID=GCA008085315_01609_gene;locus_tag=GCA008085315_01609;gene=gph contig_20 Pyrodigal CDS 173551 174225 . + 0 ID=GCA008085315_01609;Name=phosphoglycolate phosphatase;locus_tag=GCA008085315_01609;product=phosphoglycolate phosphatase;Dbxref=GO:0005975,GO:0008967;gene=gph;Parent=GCA008085315_01609_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0546,RefSeq:WP_005544838.1,SO:0001217,UniParc:UPI0001B9F792,UniRef:UniRef100_A0A5D0EMX9,UniRef:UniRef50_P44755,UniRef:UniRef90_E6L0I4;ec_number=3.1.3.18 contig_20 Pyrodigal gene 174510 175160 . + . ID=GCA008085315_01610_gene;locus_tag=GCA008085315_01610;gene=ftsE contig_20 Pyrodigal CDS 174510 175160 . + 0 ID=GCA008085315_01610;Name=cell division ATP-binding protein FtsE;locus_tag=GCA008085315_01610;product=cell division ATP-binding protein FtsE;Dbxref=GO:0000910,GO:0005524;gene=ftsE;Parent=GCA008085315_01610_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2884,COG:D,RefSeq:WP_005544836.1,SO:0001217,UniParc:UPI00022AC52A,UniRef:UniRef100_UPI00022AC52A,UniRef:UniRef50_W0QFT9,UniRef:UniRef90_E6KZV2 contig_20 Pyrodigal gene 175169 176104 . + . ID=GCA008085315_01611_gene;locus_tag=GCA008085315_01611;gene=ftsX contig_20 Pyrodigal CDS 175169 176104 . + 0 ID=GCA008085315_01611;Name=permease-like cell division protein FtsX;locus_tag=GCA008085315_01611;product=permease-like cell division protein FtsX;Dbxref=GO:0000910;gene=ftsX;Parent=GCA008085315_01611_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2177,COG:D,RefSeq:WP_148321111.1,SO:0001217,UniParc:UPI0011DBDC0B,UniRef:UniRef100_UPI0011DBDC0B,UniRef:UniRef50_P44872,UniRef:UniRef90_A0A142G142 contig_20 Pyrodigal gene 176238 176654 . - . ID=GCA008085315_01612_gene;locus_tag=GCA008085315_01612 contig_20 Pyrodigal CDS 176238 176654 . - 0 ID=GCA008085315_01612;Name=threonine ammonia-lyase;locus_tag=GCA008085315_01612;product=threonine ammonia-lyase;Parent=GCA008085315_01612_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005544833.1,SO:0001217,UniParc:UPI0001B9F78F,UniRef:UniRef100_UPI0001B9F78F,UniRef:UniRef50_UPI0001B9F78F,UniRef:UniRef90_UPI0001B9F78F contig_20 Pyrodigal gene 176705 177112 . - . ID=GCA008085315_01613_gene;locus_tag=GCA008085315_01613 contig_20 Pyrodigal CDS 176705 177112 . - 0 ID=GCA008085315_01613;Name=pyridoxal-phosphate dependent enzyme;locus_tag=GCA008085315_01613;product=pyridoxal-phosphate dependent enzyme;Parent=GCA008085315_01613_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A448MIM4,UniRef:UniRef90_UPI0001B9F78E contig_20 Pyrodigal gene 177186 178046 . - . ID=GCA008085315_01614_gene;locus_tag=GCA008085315_01614 contig_20 Pyrodigal CDS 177186 178046 . - 0 ID=GCA008085315_01614;Name=hypothetical protein;locus_tag=GCA008085315_01614;product=hypothetical protein;Parent=GCA008085315_01614_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=PFAM:PF00205.28,PFAM:PF02776.23 contig_20 Pyrodigal gene 178357 179175 . + . ID=GCA008085315_01615_gene;locus_tag=GCA008085315_01615;gene=cof contig_20 Pyrodigal CDS 178357 179175 . + 0 ID=GCA008085315_01615;Name=Cof-type HAD-IIB family hydrolase;locus_tag=GCA008085315_01615;product=Cof-type HAD-IIB family hydrolase;gene=cof;Parent=GCA008085315_01615_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0561,COG:HR,RefSeq:WP_148321109.1,SO:0001217,UniParc:UPI0011D50C22,UniRef:UniRef100_UPI0011D50C22,UniRef:UniRef50_P44771,UniRef:UniRef90_A0A5D0ELR7 contig_20 Pyrodigal gene 179213 180136 . - . ID=GCA008085315_01616_gene;locus_tag=GCA008085315_01616;gene=pldB contig_20 Pyrodigal CDS 179213 180136 . - 0 ID=GCA008085315_01616;Name=Hydrolase;locus_tag=GCA008085315_01616;product=Hydrolase;gene=pldB;Parent=GCA008085315_01616_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2267,COG:I,RefSeq:WP_005544826.1,SO:0001217,UniParc:UPI0001B9F78B,UniRef:UniRef100_UPI0001B9F78B,UniRef:UniRef50_P44800,UniRef:UniRef90_A0A142FZJ3 contig_20 Pyrodigal gene 180129 181388 . - . ID=GCA008085315_01617_gene;locus_tag=GCA008085315_01617;gene=rfaL contig_20 Pyrodigal CDS 180129 181388 . - 0 ID=GCA008085315_01617;Name=O-antigen ligase family protein;locus_tag=GCA008085315_01617;product=O-antigen ligase family protein;gene=rfaL;Parent=GCA008085315_01617_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3307,COG:M,SO:0001217,UniRef:UniRef50_A0A142G3A1,UniRef:UniRef90_A0A142G3A1 contig_20 Pyrodigal gene 181479 182558 . - . ID=GCA008085315_01618_gene;locus_tag=GCA008085315_01618;gene=fbaA contig_20 Pyrodigal CDS 181479 182558 . - 0 ID=GCA008085315_01618;Name=class II fructose-bisphosphate aldolase;locus_tag=GCA008085315_01618;product=class II fructose-bisphosphate aldolase;Dbxref=GO:0004332,GO:0005829,GO:0005975,GO:0006094,GO:0006096,GO:0008270;gene=fbaA;Parent=GCA008085315_01618_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0191,COG:G,KEGG:K01624,RefSeq:WP_005544820.1,SO:0001217,UniParc:UPI0001B9F788,UniRef:UniRef100_UPI0001B9F788,UniRef:UniRef50_P14540,UniRef:UniRef90_P44429;ec_number=4.1.2.13 contig_20 Pyrodigal gene 182623 183786 . - . ID=GCA008085315_01619_gene;locus_tag=GCA008085315_01619;gene=pgk contig_20 Pyrodigal CDS 182623 183786 . - 0 ID=GCA008085315_01619;Name=phosphoglycerate kinase;locus_tag=GCA008085315_01619;product=phosphoglycerate kinase;Dbxref=GO:0004618,GO:0005524,GO:0005829,GO:0006094,GO:0006096,GO:0043531;gene=pgk;Parent=GCA008085315_01619_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_000111274,COG:COG0126,COG:G,KEGG:K00927,RefSeq:WP_005544819.1,SO:0001217,UniParc:UPI0001B9F787,UniRef:UniRef100_UPI0001B9F787,UniRef:UniRef50_P0A799,UniRef:UniRef90_P43726;ec_number=2.7.2.3 contig_20 Pyrodigal gene 183899 184594 . - . ID=GCA008085315_01620_gene;locus_tag=GCA008085315_01620;gene=rnaI contig_20 Pyrodigal CDS 183899 184594 . - 0 ID=GCA008085315_01620;Name=Ribonuclease T;locus_tag=GCA008085315_01620;product=Ribonuclease T;gene=rnaI;Parent=GCA008085315_01620_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3719,COG:J,KEGG:K01166,RefSeq:WP_148321108.1,SO:0001217,UniParc:UPI0011DC6F88,UniRef:UniRef100_UPI0011DC6F88,UniRef:UniRef50_A0A142FZJ0,UniRef:UniRef90_A0A142FZJ0;ec_number=4.6.1.19 contig_20 Pyrodigal gene 184662 184922 . + . ID=GCA008085315_01621_gene;locus_tag=GCA008085315_01621;gene=napF contig_20 Pyrodigal CDS 184662 184922 . + 0 ID=GCA008085315_01621;Name=YfhL family 4Fe-4S dicluster ferredoxin;locus_tag=GCA008085315_01621;product=YfhL family 4Fe-4S dicluster ferredoxin;gene=napF;Parent=GCA008085315_01621_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1145,RefSeq:WP_026161206.1,SO:0001217,UniParc:UPI0004375932,UniRef:UniRef100_UPI0004375932,UniRef:UniRef50_U3U288,UniRef:UniRef90_I3DJ97 contig_20 Pyrodigal gene 184988 186064 . - . ID=GCA008085315_01622_gene;locus_tag=GCA008085315_01622;gene=spoU contig_20 Pyrodigal CDS 184988 186064 . - 0 ID=GCA008085315_01622;Name=tRNA/rRNA methyltransferase;locus_tag=GCA008085315_01622;product=tRNA/rRNA methyltransferase;Dbxref=GO:0003723,GO:0006396,GO:0008173;gene=spoU;Parent=GCA008085315_01622_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0566,COG:J,KEGG:K03214,RefSeq:WP_005544812.1,SO:0001217,UniParc:UPI0001B9F784,UniRef:UniRef100_UPI0001B9F784,UniRef:UniRef50_A0A379CB98,UniRef:UniRef90_A0A142FZI8;ec_number=2.1.1.- contig_20 Pyrodigal gene 186250 187617 . + . ID=GCA008085315_01623_gene;locus_tag=GCA008085315_01623;gene=pssA contig_20 Pyrodigal CDS 186250 187617 . + 0 ID=GCA008085315_01623;Name=CDP-diacylglycerol--serine O-phosphatidyltransferase;locus_tag=GCA008085315_01623;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;Dbxref=GO:0008444,GO:0032049;gene=pssA;Parent=GCA008085315_01623_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1502,COG:I,KEGG:K00998,RefSeq:WP_005544810.1,SO:0001217,UniParc:UPI0001B9F783,UniRef:UniRef100_UPI0001B9F783,UniRef:UniRef50_P44704,UniRef:UniRef90_A0A142FZI7;ec_number=2.7.8.8 ##sequence-region contig_21 1 135737 contig_21 Bakta region 1 135737 . + . ID=contig_21;Name=contig_21 contig_21 Pyrodigal gene 40 1422 . - . ID=GCA008085315_01624_gene;locus_tag=GCA008085315_01624;gene=mauG contig_21 Pyrodigal CDS 40 1422 . - 0 ID=GCA008085315_01624;Name=Quinol peroxidase;locus_tag=GCA008085315_01624;product=Quinol peroxidase;gene=mauG;Parent=GCA008085315_01624_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1858,COG:O,KEGG:K00428,RefSeq:WP_148320988.1,SO:0001217,UniParc:UPI0011D495EB,UniRef:UniRef100_UPI0011D495EB,UniRef:UniRef50_Q9CM96,UniRef:UniRef90_A2A1C5;ec_number=1.11.1.5 contig_21 Pyrodigal gene 1763 1972 . + . ID=GCA008085315_01625_gene;locus_tag=GCA008085315_01625 contig_21 Pyrodigal CDS 1763 1972 . + 0 ID=GCA008085315_01625;Name=hypothetical protein;locus_tag=GCA008085315_01625;product=hypothetical protein;Parent=GCA008085315_01625_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005556405.1,SO:0001217,UniParc:UPI0001CA75A2,UniRef:UniRef100_A0A142G300,UniRef:UniRef50_A0A336N2P9,UniRef:UniRef90_A0A142G300 contig_21 Pyrodigal gene 2029 2451 . + . ID=GCA008085315_01626_gene;locus_tag=GCA008085315_01626;gene=ykgB contig_21 Pyrodigal CDS 2029 2451 . + 0 ID=GCA008085315_01626;Name=DUF417 domain-containing protein;locus_tag=GCA008085315_01626;product=DUF417 domain-containing protein;gene=ykgB;Parent=GCA008085315_01626_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3059,COG:V,RefSeq:WP_005543669.1,SO:0001217,UniParc:UPI0001B9F83E,UniRef:UniRef100_A0A142G301,UniRef:UniRef50_K0G750,UniRef:UniRef90_G4A6Z5 contig_21 Pyrodigal gene 2524 3015 . - . ID=GCA008085315_01627_gene;locus_tag=GCA008085315_01627 contig_21 Pyrodigal CDS 2524 3015 . - 0 ID=GCA008085315_01627;Name=DUF302 domain-containing protein;locus_tag=GCA008085315_01627;product=DUF302 domain-containing protein;Parent=GCA008085315_01627_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3439,COG:S,RefSeq:WP_005568772.1,SO:0001217,UniParc:UPI00022ADF0A,UniRef:UniRef100_UPI00022ADF0A,UniRef:UniRef50_A0A1V3JRF7,UniRef:UniRef90_A0A142G302 contig_21 Pyrodigal gene 3224 4045 . + . ID=GCA008085315_01628_gene;locus_tag=GCA008085315_01628;gene=ega3 contig_21 Pyrodigal CDS 3224 4045 . + 0 ID=GCA008085315_01628;Name=putative glucanotransferase;locus_tag=GCA008085315_01628;product=putative glucanotransferase;gene=ega3;Parent=GCA008085315_01628_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3868,COG:G,KEGG:K21006,RefSeq:WP_012821068.1,SO:0001217,UniParc:UPI0001B9F83C,UniRef:UniRef100_UPI0001B9F83C,UniRef:UniRef50_E0E4R1,UniRef:UniRef90_G4A6Z7 contig_21 Pyrodigal gene 4567 5493 . + . ID=GCA008085315_01629_gene;locus_tag=GCA008085315_01629;gene=hflC contig_21 Pyrodigal CDS 4567 5493 . + 0 ID=GCA008085315_01629;Name=Protein QmcA;locus_tag=GCA008085315_01629;product=Protein QmcA;gene=hflC;Parent=GCA008085315_01629_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0330,COG:O,RefSeq:WP_005543674.1,SO:0001217,UniParc:UPI0001B9F83B,UniRef:UniRef100_A0A142G304,UniRef:UniRef50_P0AA53,UniRef:UniRef90_E6KY68 contig_21 Pyrodigal gene 5517 5963 . + . ID=GCA008085315_01630_gene;locus_tag=GCA008085315_01630;gene=ybbJ contig_21 Pyrodigal CDS 5517 5963 . + 0 ID=GCA008085315_01630;Name=Regulator of membrane protease activity;locus_tag=GCA008085315_01630;product=Regulator of membrane protease activity;gene=ybbJ;Parent=GCA008085315_01630_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1585,COG:O,RefSeq:WP_005568766.1,SO:0001217,UniParc:UPI0001B9F83A,UniRef:UniRef100_UPI0001B9F83A,UniRef:UniRef50_A0A1V4B1K9,UniRef:UniRef90_G4A6Z9 contig_21 Pyrodigal gene 5972 6583 . + . ID=GCA008085315_01631_gene;locus_tag=GCA008085315_01631;gene=mdaB contig_21 Pyrodigal CDS 5972 6583 . + 0 ID=GCA008085315_01631;Name=NAD(P)H oxidoreductase;locus_tag=GCA008085315_01631;product=NAD(P)H oxidoreductase;gene=mdaB;Parent=GCA008085315_01631_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2249,COG:R,RefSeq:WP_005568765.1,SO:0001217,UniParc:UPI00022ADF07,UniRef:UniRef100_UPI00022ADF07,UniRef:UniRef50_P45245,UniRef:UniRef90_A0A142G306 contig_21 Pyrodigal gene 6583 7146 . + . ID=GCA008085315_01632_gene;locus_tag=GCA008085315_01632;gene=torD contig_21 Pyrodigal CDS 6583 7146 . + 0 ID=GCA008085315_01632;Name=Molecular chaperone;locus_tag=GCA008085315_01632;product=Molecular chaperone;gene=torD;Parent=GCA008085315_01632_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3381,COG:O,RefSeq:WP_005547988.1,SO:0001217,UniParc:UPI0001B9F838,UniRef:UniRef100_UPI0001B9F838,UniRef:UniRef50_P44248,UniRef:UniRef90_A0A142G307 contig_21 Pyrodigal gene 7204 8139 . - . ID=GCA008085315_01633_gene;locus_tag=GCA008085315_01633;gene=lpxP contig_21 Pyrodigal CDS 7204 8139 . - 0 ID=GCA008085315_01633;Name=Lipid A biosynthesis acyltransferase;locus_tag=GCA008085315_01633;product=Lipid A biosynthesis acyltransferase;gene=lpxP;Parent=GCA008085315_01633_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1560,COG:I,KEGG:K02517,RefSeq:WP_005574082.1,SO:0001217,UniParc:UPI0001B9F837,UniRef:UniRef100_UPI0001B9F837,UniRef:UniRef50_P0ACV0,UniRef:UniRef90_A0A5D0EL14;ec_number=2.3.1.241 contig_21 Pyrodigal gene 8253 9683 . + . ID=GCA008085315_01634_gene;locus_tag=GCA008085315_01634;gene=hldE contig_21 Pyrodigal CDS 8253 9683 . + 0 ID=GCA008085315_01634;Name=bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE;locus_tag=GCA008085315_01634;product=bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE;Dbxref=GO:0005975,GO:0009058,GO:0016779;gene=hldE;Parent=GCA008085315_01634_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2870,COG:M,KEGG:K03272,RefSeq:WP_148320987.1,SO:0001217,UniParc:UPI0011DA7F51,UniRef:UniRef100_UPI0011DA7F51,UniRef:UniRef50_Q7MNY3,UniRef:UniRef90_E6KY63;ec_number=2.7.7.70 contig_21 Pyrodigal gene 9727 10107 . - . ID=GCA008085315_01635_gene;locus_tag=GCA008085315_01635;gene=sufE contig_21 Pyrodigal CDS 9727 10107 . - 0 ID=GCA008085315_01635;Name=SufE family protein;locus_tag=GCA008085315_01635;product=SufE family protein;gene=sufE;Parent=GCA008085315_01635_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2166,COG:OJ,RefSeq:WP_005543509.1,SO:0001217,UniParc:UPI0001B9F7E4,UniRef:UniRef100_A0A5D0EMF5,UniRef:UniRef50_P44156,UniRef:UniRef90_A0A5D0EMF5 contig_21 Pyrodigal gene 10104 11300 . - . ID=GCA008085315_01636_gene;locus_tag=GCA008085315_01636;gene=csdA contig_21 Pyrodigal CDS 10104 11300 . - 0 ID=GCA008085315_01636;Name=cysteine desulfurase;locus_tag=GCA008085315_01636;product=cysteine desulfurase;gene=csdA;Parent=GCA008085315_01636_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0520,COG:E,KEGG:K01766,RefSeq:WP_005568762.1,SO:0001217,UniParc:UPI00022ADF04,UniRef:UniRef100_UPI00022ADF04,UniRef:UniRef50_Q57476,UniRef:UniRef90_A0A5D0ELY2;ec_number=4.4.1.- contig_21 Pyrodigal gene 11306 11806 . - . ID=GCA008085315_01637_gene;locus_tag=GCA008085315_01637;gene=yncB contig_21 Pyrodigal CDS 11306 11806 . - 0 ID=GCA008085315_01637;Name=Chromosome partitioning protein ParB;locus_tag=GCA008085315_01637;product=Chromosome partitioning protein ParB;gene=yncB;Parent=GCA008085315_01637_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1525,COG:L,RefSeq:WP_005547979.1,SO:0001217,UniParc:UPI0001B9F7E2,UniRef:UniRef100_UPI0001B9F7E2,UniRef:UniRef50_A0A5D0ELY4,UniRef:UniRef90_A0A5D0ELY4 contig_21 tRNAscan-SE gene 11898 11983 . - . ID=GCA008085315_01638_gene;locus_tag=GCA008085315_01638;gene=trnL contig_21 tRNAscan-SE tRNA 11898 11983 . - . ID=GCA008085315_01638;Name=tRNA-Leu(caa);locus_tag=GCA008085315_01638;product=tRNA-Leu(caa);gene=trnL;anti_codon=caa;amino_acid=Leu;Parent=GCA008085315_01638_gene;inference=profile:tRNAscan:2.0;Note=SO:0000264 contig_21 Pyrodigal gene 12225 12635 . + . ID=GCA008085315_01639_gene;locus_tag=GCA008085315_01639;gene=yohJ contig_21 Pyrodigal CDS 12225 12635 . + 0 ID=GCA008085315_01639;Name=CidA/LrgA family protein;locus_tag=GCA008085315_01639;product=CidA/LrgA family protein;gene=yohJ;Parent=GCA008085315_01639_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1380,COG:R,RefSeq:WP_005574087.1,SO:0001217,UniParc:UPI0001B9F7E1,UniRef:UniRef100_UPI0001B9F7E1,UniRef:UniRef50_Q9CME9,UniRef:UniRef90_A0A142FXF2 contig_21 Pyrodigal gene 12635 13327 . + . ID=GCA008085315_01640_gene;locus_tag=GCA008085315_01640;gene=lrgB contig_21 Pyrodigal CDS 12635 13327 . + 0 ID=GCA008085315_01640;Name=CidB/LrgB family autolysis modulator;locus_tag=GCA008085315_01640;product=CidB/LrgB family autolysis modulator;gene=lrgB;Parent=GCA008085315_01640_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1346,COG:M,RefSeq:WP_005547975.1,SO:0001217,UniParc:UPI0001B9F7E0,UniRef:UniRef100_UPI0001B9F7E0,UniRef:UniRef50_P45146,UniRef:UniRef90_G4A708 contig_21 Pyrodigal gene 13329 14681 . + . ID=GCA008085315_01641_gene;locus_tag=GCA008085315_01641;gene=dgt contig_21 Pyrodigal CDS 13329 14681 . + 0 ID=GCA008085315_01641;Name=anti-phage deoxyguanosine triphosphatase;locus_tag=GCA008085315_01641;product=anti-phage deoxyguanosine triphosphatase;Dbxref=GO:0006203,GO:0008832;gene=dgt;Parent=GCA008085315_01641_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0232,COG:F,KEGG:K01129,RefSeq:WP_005547973.1,SO:0001217,UniParc:UPI0001B9F7DF,UniRef:UniRef100_UPI0001B9F7DF,UniRef:UniRef50_Q8EEA2,UniRef:UniRef90_G4A709;ec_number=3.1.5.1 contig_21 Pyrodigal gene 14723 16666 . + . ID=GCA008085315_01642_gene;locus_tag=GCA008085315_01642;gene=uup contig_21 Pyrodigal CDS 14723 16666 . + 0 ID=GCA008085315_01642;Name=ABC transporter ATP-binding protein;locus_tag=GCA008085315_01642;product=ABC transporter ATP-binding protein;Dbxref=GO:0005524;gene=uup;Parent=GCA008085315_01642_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0488,COG:R,RefSeq:WP_005547971.1,SO:0001217,UniParc:UPI00022ADF00,UniRef:UniRef100_UPI00022ADF00,UniRef:UniRef50_P43672,UniRef:UniRef90_E6KY56 contig_21 Pyrodigal gene 16927 17679 . + . ID=GCA008085315_01643_gene;locus_tag=GCA008085315_01643 contig_21 Pyrodigal CDS 16927 17679 . + 0 ID=GCA008085315_01643;Name=putative phage abortive infection protein;locus_tag=GCA008085315_01643;product=putative phage abortive infection protein;Parent=GCA008085315_01643_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_233439052.1,SO:0001217,UniParc:UPI001F348DA6,UniRef:UniRef100_UPI001F348DA6,UniRef:UniRef50_UPI001F348DA6,UniRef:UniRef90_UPI001F348DA6 contig_21 Pyrodigal gene 17681 17923 . + . ID=GCA008085315_01644_gene;locus_tag=GCA008085315_01644 contig_21 Pyrodigal CDS 17681 17923 . + 0 ID=GCA008085315_01644;Name=putative phage abortive infection protein;locus_tag=GCA008085315_01644;product=putative phage abortive infection protein;Parent=GCA008085315_01644_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_233441419.1,SO:0001217,UniParc:UPI001F40FFB9,UniRef:UniRef100_UPI0011D4CFF6,UniRef:UniRef50_UPI000D645024,UniRef:UniRef90_UPI0011D4CFF6 contig_21 Pyrodigal gene 17926 18057 . + . ID=GCA008085315_01645_gene;locus_tag=GCA008085315_01645 contig_21 Pyrodigal CDS 17926 18057 . + 0 ID=GCA008085315_01645;Name=hypothetical protein;locus_tag=GCA008085315_01645;product=hypothetical protein;Parent=GCA008085315_01645_gene;inference=ab initio prediction:Pyrodigal:3.5 contig_21 Pyrodigal gene 18153 18422 . + . ID=GCA008085315_01646_gene;locus_tag=GCA008085315_01646;gene=sgaB contig_21 Pyrodigal CDS 18153 18422 . + 0 ID=GCA008085315_01646;Name=Ascorbate-specific phosphotransferase enzyme IIB component;locus_tag=GCA008085315_01646;product=Ascorbate-specific phosphotransferase enzyme IIB component;gene=sgaB;Parent=GCA008085315_01646_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3414,COG:G,RefSeq:WP_005547968.1,SO:0001217,UniParc:UPI0001B9F7DC,UniRef:UniRef100_UPI0001B9F7DC,UniRef:UniRef50_D4GMC5,UniRef:UniRef90_A0A0K1N4H8 contig_21 Pyrodigal gene 18439 18576 . + . ID=GCA008085315_01647_gene;locus_tag=GCA008085315_01647;pseudogene=unitary contig_21 Pyrodigal CDS 18439 18576 . + 0 ID=GCA008085315_01647;Name=Ascorbate-specific PTS system EIIC component;locus_tag=GCA008085315_01647;product=Ascorbate-specific PTS system EIIC component;pseudogene=unitary;Parent=GCA008085315_01647_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A379VMT1,UniRef:UniRef90_A0A6D2G7A8 contig_21 Pyrodigal gene 18585 19793 . + . ID=GCA008085315_01648_gene;locus_tag=GCA008085315_01648 contig_21 Pyrodigal CDS 18585 19793 . + 0 ID=GCA008085315_01648;Name=PTS ascorbate transporter subunit IIC;locus_tag=GCA008085315_01648;product=PTS ascorbate transporter subunit IIC;Dbxref=GO:0009401;Parent=GCA008085315_01648_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A2T7T7R7,UniRef:UniRef90_A0A336N291 contig_21 Pyrodigal gene 19803 20627 . + . ID=GCA008085315_01649_gene;locus_tag=GCA008085315_01649;gene=tktA1 contig_21 Pyrodigal CDS 19803 20627 . + 0 ID=GCA008085315_01649;Name=Transketolase;locus_tag=GCA008085315_01649;product=Transketolase;gene=tktA1;Parent=GCA008085315_01649_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3959,COG:G,KEGG:K00615,RefSeq:WP_148333985.1,SO:0001217,UniParc:UPI0011D57519,UniRef:UniRef100_UPI0011D57519,UniRef:UniRef50_A0A1A7NVN3,UniRef:UniRef90_A0A336N352;ec_number=2.2.1.1 contig_21 Pyrodigal gene 20617 21561 . + . ID=GCA008085315_01650_gene;locus_tag=GCA008085315_01650;gene=tktA2 contig_21 Pyrodigal CDS 20617 21561 . + 0 ID=GCA008085315_01650;Name=1-deoxy-D-xylulose-5-phosphate synthase;locus_tag=GCA008085315_01650;product=1-deoxy-D-xylulose-5-phosphate synthase;gene=tktA2;Parent=GCA008085315_01650_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3958,COG:G,RefSeq:WP_005547960.1,SO:0001217,UniParc:UPI0001B9F7D8,UniRef:UniRef100_UPI0001B9F7D8,UniRef:UniRef50_A0A2J0Q8Z5,UniRef:UniRef90_A0A336N213 contig_21 Pyrodigal gene 21728 22678 . - . ID=GCA008085315_01651_gene;locus_tag=GCA008085315_01651;gene=prmB contig_21 Pyrodigal CDS 21728 22678 . - 0 ID=GCA008085315_01651;Name=50S ribosomal protein L3 N(5)-glutamine methyltransferase;locus_tag=GCA008085315_01651;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;Dbxref=GO:0008276,GO:0008757,GO:0018364,GO:0042273;gene=prmB;Parent=GCA008085315_01651_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2890,COG:J,KEGG:K07320,RefSeq:WP_005547958.1,SO:0001217,UniParc:UPI00022ACE80,UniRef:UniRef100_UPI00022ACE80,UniRef:UniRef50_A0A5D0EKL3,UniRef:UniRef90_A0A5D0EKL3;ec_number=2.1.1.298 contig_21 Pyrodigal gene 22741 23247 . + . ID=GCA008085315_01652_gene;locus_tag=GCA008085315_01652;gene=smrB contig_21 Pyrodigal CDS 22741 23247 . + 0 ID=GCA008085315_01652;Name=endonuclease SmrB;locus_tag=GCA008085315_01652;product=endonuclease SmrB;gene=smrB;Parent=GCA008085315_01652_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2840,COG:JL,RefSeq:WP_005567535.1,SO:0001217,UniParc:UPI00022ACE81,UniRef:UniRef100_UPI00022ACE81,UniRef:UniRef50_P44126,UniRef:UniRef90_A0A142G289 contig_21 Pyrodigal gene 23244 25385 . - . ID=GCA008085315_01653_gene;locus_tag=GCA008085315_01653;gene=yccC contig_21 Pyrodigal CDS 23244 25385 . - 0 ID=GCA008085315_01653;Name=TIGR01666 family membrane protein;locus_tag=GCA008085315_01653;product=TIGR01666 family membrane protein;gene=yccC;Parent=GCA008085315_01653_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1289,COG:S,RefSeq:WP_148320984.1,SO:0001217,UniParc:UPI0011DAE2F5,UniRef:UniRef100_UPI0011DAE2F5,UniRef:UniRef50_P44289,UniRef:UniRef90_A0A5D0EKK6 contig_21 Pyrodigal gene 25394 25867 . - . ID=GCA008085315_01654_gene;locus_tag=GCA008085315_01654;gene=yccF contig_21 Pyrodigal CDS 25394 25867 . - 0 ID=GCA008085315_01654;Name=YccF domain-containing protein;locus_tag=GCA008085315_01654;product=YccF domain-containing protein;gene=yccF;Parent=GCA008085315_01654_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3304,COG:S,RefSeq:WP_005540343.1,SO:0001217,UniParc:UPI0001B9F7D3,UniRef:UniRef100_A0A142G291,UniRef:UniRef50_P0AB12,UniRef:UniRef90_A0A142G291 contig_21 Pyrodigal gene 25867 26325 . - . ID=GCA008085315_01655_gene;locus_tag=GCA008085315_01655;gene=mgsA contig_21 Pyrodigal CDS 25867 26325 . - 0 ID=GCA008085315_01655;Name=methylglyoxal synthase;locus_tag=GCA008085315_01655;product=methylglyoxal synthase;Dbxref=GO:0006007,GO:0008929,GO:0019242;gene=mgsA;Parent=GCA008085315_01655_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005547954.1,SO:0001217,UniParc:UPI0001B9F7D2,UniRef:UniRef100_UPI0001B9F7D2,UniRef:UniRef50_Q65UB4,UniRef:UniRef90_E6KWR6;ec_number=4.2.3.3 contig_21 Pyrodigal gene 26388 27062 . - . ID=GCA008085315_01656_gene;locus_tag=GCA008085315_01656;gene=yccT contig_21 Pyrodigal CDS 26388 27062 . - 0 ID=GCA008085315_01656;Name=curli polymerization inhibitor CsgI-related protein;locus_tag=GCA008085315_01656;product=curli polymerization inhibitor CsgI-related protein;gene=yccT;Parent=GCA008085315_01656_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3110,COG:S,KEGG:K09909,RefSeq:WP_005547953.1,SO:0001217,UniParc:UPI0001B9F7D1,UniRef:UniRef100_UPI0001B9F7D1,UniRef:UniRef50_P44290,UniRef:UniRef90_A0A142G293 contig_21 Pyrodigal gene 27207 27479 . + . ID=GCA008085315_01657_gene;locus_tag=GCA008085315_01657;gene=acyP contig_21 Pyrodigal CDS 27207 27479 . + 0 ID=GCA008085315_01657;Name=acylphosphatase;locus_tag=GCA008085315_01657;product=acylphosphatase;gene=acyP;Parent=GCA008085315_01657_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1254,RefSeq:WP_005540337.1,SO:0001217,UniParc:UPI0001B9F7D0,UniRef:UniRef100_A0A5D0L066,UniRef:UniRef50_Q9CNN1,UniRef:UniRef90_A0A5D0L066;ec_number=3.6.1.7 contig_21 Pyrodigal gene 27454 28302 . - . ID=GCA008085315_01658_gene;locus_tag=GCA008085315_01658;gene=afeD contig_21 Pyrodigal CDS 27454 28302 . - 0 ID=GCA008085315_01658;Name=iron ABC transporter permease subunit AfeD;locus_tag=GCA008085315_01658;product=iron ABC transporter permease subunit AfeD;gene=afeD;Parent=GCA008085315_01658_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_005540335,COG:COG1108,COG:P,KEGG:K11606,RefSeq:WP_005540335.1,SO:0001217,UniParc:UPI000051AF1A,UniRef:UniRef100_Q4VQ75,UniRef:UniRef50_V7IHA9,UniRef:UniRef90_Q4VQ75 contig_21 Pyrodigal gene 28299 29156 . - . ID=GCA008085315_01659_gene;locus_tag=GCA008085315_01659;gene=afeC contig_21 Pyrodigal CDS 28299 29156 . - 0 ID=GCA008085315_01659;Name=iron ABC transporter permease subunit AfeC;locus_tag=GCA008085315_01659;product=iron ABC transporter permease subunit AfeC;gene=afeC;Parent=GCA008085315_01659_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_005540332,COG:COG1108,COG:P,KEGG:K11605,RefSeq:WP_005540332.1,SO:0001217,UniParc:UPI000051AF19,UniRef:UniRef100_Q4VQ76,UniRef:UniRef50_Q56954,UniRef:UniRef90_Q4VQ76 contig_21 Pyrodigal gene 29156 30046 . - . ID=GCA008085315_01660_gene;locus_tag=GCA008085315_01660;gene=afeB contig_21 Pyrodigal CDS 29156 30046 . - 0 ID=GCA008085315_01660;Name=ironABC transporter ATP-binding protein AfeB;locus_tag=GCA008085315_01660;product=ironABC transporter ATP-binding protein AfeB;gene=afeB;Parent=GCA008085315_01660_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_005553116,COG:COG1121,COG:P,RefSeq:WP_005547952.1,SO:0001217,UniParc:UPI0001B9F7CF,UniRef:UniRef100_UPI0001B9F7CF,UniRef:UniRef50_P44662,UniRef:UniRef90_E6KWS1 contig_21 Pyrodigal gene 30046 30927 . - . ID=GCA008085315_01661_gene;locus_tag=GCA008085315_01661;gene=afeA contig_21 Pyrodigal CDS 30046 30927 . - 0 ID=GCA008085315_01661;Name=iron ABC transporter substrate-binding protein AfeA;locus_tag=GCA008085315_01661;product=iron ABC transporter substrate-binding protein AfeA;gene=afeA;Parent=GCA008085315_01661_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_005540327,COG:COG0803,COG:P,KEGG:K11604,RefSeq:WP_005547951.1,SO:0001217,UniParc:UPI0001B9F7CE,UniRef:UniRef100_UPI0001B9F7CE,UniRef:UniRef50_Q57449,UniRef:UniRef90_Q4VQ78 contig_21 Pyrodigal gene 31025 31354 . - . ID=GCA008085315_01662_gene;locus_tag=GCA008085315_01662;gene=dsrC contig_21 Pyrodigal CDS 31025 31354 . - 0 ID=GCA008085315_01662;Name=Sulfurtransferase;locus_tag=GCA008085315_01662;product=Sulfurtransferase;gene=dsrC;Parent=GCA008085315_01662_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2920,COG:J,KEGG:K11179,RefSeq:WP_005574103.1,SO:0001217,UniParc:UPI0001B9F7CD,UniRef:UniRef100_UPI0001B9F7CD,UniRef:UniRef50_A0A848MJB7,UniRef:UniRef90_A0A336NCD3;ec_number=2.8.1.- contig_21 Pyrodigal gene 31440 32102 . - . ID=GCA008085315_01663_gene;locus_tag=GCA008085315_01663;gene=ybhL contig_21 Pyrodigal CDS 31440 32102 . - 0 ID=GCA008085315_01663;Name=BAX inhibitor protein;locus_tag=GCA008085315_01663;product=BAX inhibitor protein;gene=ybhL;Parent=GCA008085315_01663_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0670,COG:P,RefSeq:WP_005547949.1,SO:0001217,UniParc:UPI0001B9F7CC,UniRef:UniRef100_UPI0001B9F7CC,UniRef:UniRef50_P0AAC6,UniRef:UniRef90_A0A336N8F0 contig_21 Pyrodigal gene 32932 34623 . + . ID=GCA008085315_01664_gene;locus_tag=GCA008085315_01664 contig_21 Pyrodigal CDS 32932 34623 . + 0 ID=GCA008085315_01664;Name=SNF2-related protein;locus_tag=GCA008085315_01664;product=SNF2-related protein;Parent=GCA008085315_01664_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A5C1AP18,UniRef:UniRef90_UPI00022C022D contig_21 Pyrodigal gene 35158 37431 . - . ID=GCA008085315_01665_gene;locus_tag=GCA008085315_01665;gene=metE contig_21 Pyrodigal CDS 35158 37431 . - 0 ID=GCA008085315_01665;Name=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;locus_tag=GCA008085315_01665;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;Dbxref=GO:0003871,GO:0008270,GO:0008652,GO:0009086;gene=metE;Parent=GCA008085315_01665_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0620,COG:E,KEGG:K00549,RefSeq:WP_005547946.1,SO:0001217,UniParc:UPI0001B9F7C9,UniRef:UniRef100_UPI0001B9F7C9,UniRef:UniRef50_P45331,UniRef:UniRef90_E6KWS9;ec_number=2.1.1.14 contig_21 Pyrodigal gene 37731 38663 . + . ID=GCA008085315_01666_gene;locus_tag=GCA008085315_01666;gene=metR contig_21 Pyrodigal CDS 37731 38663 . + 0 ID=GCA008085315_01666;Name=HTH-type transcriptional regulator MetR;locus_tag=GCA008085315_01666;product=HTH-type transcriptional regulator MetR;gene=metR;Parent=GCA008085315_01666_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0583,COG:K,KEGG:K03576,RefSeq:WP_005547945.1,SO:0001217,UniParc:UPI0001B9F7C8,UniRef:UniRef100_UPI0001B9F7C8,UniRef:UniRef50_P45349,UniRef:UniRef90_Q9CNK8 contig_21 Pyrodigal gene 38668 38787 . + . ID=GCA008085315_01667_gene;locus_tag=GCA008085315_01667 contig_21 Pyrodigal CDS 38668 38787 . + 0 ID=GCA008085315_01667;Name=hypothetical protein;locus_tag=GCA008085315_01667;product=hypothetical protein;Parent=GCA008085315_01667_gene;inference=ab initio prediction:Pyrodigal:3.5 contig_21 Pyrodigal gene 38784 39395 . + . ID=GCA008085315_01668_gene;locus_tag=GCA008085315_01668;gene=azlC contig_21 Pyrodigal CDS 38784 39395 . + 0 ID=GCA008085315_01668;Name=Branched-chain amino acid transporter AzlC;locus_tag=GCA008085315_01668;product=Branched-chain amino acid transporter AzlC;gene=azlC;Parent=GCA008085315_01668_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1296,COG:E,KEGG:K26605,SO:0001217,UniRef:UniRef50_P44302,UniRef:UniRef90_A0A5D0EMV4 contig_21 Pyrodigal gene 39396 39728 . + . ID=GCA008085315_01669_gene;locus_tag=GCA008085315_01669;gene=azlD contig_21 Pyrodigal CDS 39396 39728 . + 0 ID=GCA008085315_01669;Name=Branched-chain amino acid transporter AzlD;locus_tag=GCA008085315_01669;product=Branched-chain amino acid transporter AzlD;gene=azlD;Parent=GCA008085315_01669_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1687,COG:E,RefSeq:WP_005540849.1,SO:0001217,UniParc:UPI0001B9F7C5,UniRef:UniRef100_A0A142FXL8,UniRef:UniRef50_O07923,UniRef:UniRef90_E6KWT2 contig_21 Pyrodigal gene 39795 42569 . - . ID=GCA008085315_01670_gene;locus_tag=GCA008085315_01670;gene=pqqL contig_21 Pyrodigal CDS 39795 42569 . - 0 ID=GCA008085315_01670;Name=Protease3;locus_tag=GCA008085315_01670;product=Protease3;gene=pqqL;Parent=GCA008085315_01670_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0612,COG:R,KEGG:K07263,RefSeq:WP_148320983.1,SO:0001217,UniParc:UPI0011D86715,UniRef:UniRef100_UPI0011D86715,UniRef:UniRef50_P45181,UniRef:UniRef90_A0A3S4PXR6;ec_number=3.4.24.- contig_21 Pyrodigal gene 42647 45013 . - . ID=GCA008085315_01671_gene;locus_tag=GCA008085315_01671;gene=cirA contig_21 Pyrodigal CDS 42647 45013 . - 0 ID=GCA008085315_01671;Name=TonB-dependent receptor;locus_tag=GCA008085315_01671;product=TonB-dependent receptor;gene=cirA;Parent=GCA008085315_01671_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1629,COG:P,RefSeq:WP_148320982.1,SO:0001217,UniParc:UPI0011DB29F6,UniRef:UniRef100_UPI0011DB29F6,UniRef:UniRef50_P45182,UniRef:UniRef90_A0A5D0EMV2 contig_21 Pyrodigal gene 45306 46199 . + . ID=GCA008085315_01672_gene;locus_tag=GCA008085315_01672;gene=virK contig_21 Pyrodigal CDS 45306 46199 . + 0 ID=GCA008085315_01672;Name=DUF535 domain-containing protein;locus_tag=GCA008085315_01672;product=DUF535 domain-containing protein;gene=virK;Parent=GCA008085315_01672_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2990,COG:S,KEGG:K09824,RefSeq:WP_005547940.1,SO:0001217,UniParc:UPI0001B9F7C2,UniRef:UniRef100_UPI0001B9F7C2,UniRef:UniRef50_U1QN41,UniRef:UniRef90_A0A5D0EMV0 contig_21 Pyrodigal gene 46192 46869 . + . ID=GCA008085315_01673_gene;locus_tag=GCA008085315_01673;gene=cmk contig_21 Pyrodigal CDS 46192 46869 . + 0 ID=GCA008085315_01673;Name=(d)CMP kinase;locus_tag=GCA008085315_01673;product=(d)CMP kinase;Dbxref=GO:0004127,GO:0005524,GO:0015949;gene=cmk;Parent=GCA008085315_01673_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0283,COG:F,SO:0001217,UniRef:UniRef50_A3QEC1,UniRef:UniRef90_G4A754;ec_number=2.7.4.25 contig_21 Pyrodigal gene 46967 48613 . + . ID=GCA008085315_01674_gene;locus_tag=GCA008085315_01674;gene=rpsA contig_21 Pyrodigal CDS 46967 48613 . + 0 ID=GCA008085315_01674;Name=30S ribosomal protein S1;locus_tag=GCA008085315_01674;product=30S ribosomal protein S1;Dbxref=GO:0003723,GO:0003735,GO:0005840,GO:0006412;gene=rpsA;Parent=GCA008085315_01674_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0539,COG:J,RefSeq:WP_005547938.1,SO:0001217,UniParc:UPI0001B9F773,UniRef:UniRef100_UPI0001B9F773,UniRef:UniRef50_P0AG67,UniRef:UniRef90_A0A5D0EMV6 contig_21 Pyrodigal gene 48675 48962 . + . ID=GCA008085315_01675_gene;locus_tag=GCA008085315_01675;gene=hupA contig_21 Pyrodigal CDS 48675 48962 . + 0 ID=GCA008085315_01675;Name=integration host factor subunit beta;locus_tag=GCA008085315_01675;product=integration host factor subunit beta;Dbxref=GO:0003677,GO:0005694,GO:0006310,GO:0006355;gene=hupA;Parent=GCA008085315_01675_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:B,COG:COG0776,RefSeq:WP_005540862.1,SO:0001217,UniParc:UPI0001B9F772,UniRef:UniRef100_A0A142FXL2,UniRef:UniRef50_Q3IL99,UniRef:UniRef90_A0A142FXL2 contig_21 Pyrodigal gene 49061 49357 . + . ID=GCA008085315_01676_gene;locus_tag=GCA008085315_01676;gene=lapA contig_21 Pyrodigal CDS 49061 49357 . + 0 ID=GCA008085315_01676;Name=putative lipopolysaccharide assembly protein A;locus_tag=GCA008085315_01676;product=putative lipopolysaccharide assembly protein A;gene=lapA;Parent=GCA008085315_01676_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3771,COG:M,RefSeq:WP_005547937.1,SO:0001217,UniParc:UPI0001B9F771,UniRef:UniRef100_UPI0001B9F771,UniRef:UniRef50_P44129,UniRef:UniRef90_A0A448F7R8 contig_21 Pyrodigal gene 49357 50547 . + . ID=GCA008085315_01677_gene;locus_tag=GCA008085315_01677;gene=lapB contig_21 Pyrodigal CDS 49357 50547 . + 0 ID=GCA008085315_01677;Name=lipopolysaccharide assembly protein LapB;locus_tag=GCA008085315_01677;product=lipopolysaccharide assembly protein LapB;gene=lapB;Parent=GCA008085315_01677_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2956,COG:M,RefSeq:WP_148320981.1,SO:0001217,UniParc:UPI0011DA49E3,UniRef:UniRef100_UPI0011DA49E3,UniRef:UniRef50_P44130,UniRef:UniRef90_A0A5D0EN46 contig_21 Pyrodigal gene 50577 51269 . + . ID=GCA008085315_01678_gene;locus_tag=GCA008085315_01678;gene=pyrF contig_21 Pyrodigal CDS 50577 51269 . + 0 ID=GCA008085315_01678;Name=orotidine-5'-phosphate decarboxylase;locus_tag=GCA008085315_01678;product=orotidine-5'-phosphate decarboxylase;Dbxref=GO:0004590,GO:0006207,GO:0044205;gene=pyrF;Parent=GCA008085315_01678_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0284,COG:F,RefSeq:WP_005547935.1,SO:0001217,UniParc:UPI0001B9F76F,UniRef:UniRef100_UPI0001B9F76F,UniRef:UniRef50_Q59654,UniRef:UniRef90_A0A336N890;ec_number=4.1.1.23 contig_21 Pyrodigal gene 51275 51592 . + . ID=GCA008085315_01679_gene;locus_tag=GCA008085315_01679;gene=yciH contig_21 Pyrodigal CDS 51275 51592 . + 0 ID=GCA008085315_01679;Name=stress response translation initiation inhibitor YciH;locus_tag=GCA008085315_01679;product=stress response translation initiation inhibitor YciH;gene=yciH;Parent=GCA008085315_01679_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0023,COG:J,RefSeq:WP_005547934.1,SO:0001217,UniParc:UPI0001B9F76E,UniRef:UniRef100_UPI0001B9F76E,UniRef:UniRef50_P0A2G7,UniRef:UniRef90_A0A5D0EMV5 contig_21 Pyrodigal gene 51621 51971 . - . ID=GCA008085315_01680_gene;locus_tag=GCA008085315_01680;gene=sirB2 contig_21 Pyrodigal CDS 51621 51971 . - 0 ID=GCA008085315_01680;Name=SirB2 family protein;locus_tag=GCA008085315_01680;product=SirB2 family protein;gene=sirB2;Parent=GCA008085315_01680_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3094,COG:S,RefSeq:WP_005547933.1,SO:0001217,UniParc:UPI0001B9F76D,UniRef:UniRef100_UPI0001B9F76D,UniRef:UniRef50_P44139,UniRef:UniRef90_A0A142FXK7 contig_21 Pyrodigal gene 52039 54702 . - . ID=GCA008085315_01681_gene;locus_tag=GCA008085315_01681;gene=gyrA contig_21 Pyrodigal CDS 52039 54702 . - 0 ID=GCA008085315_01681;Name=DNA topoisomerase (ATP-hydrolyzing) subunit A;locus_tag=GCA008085315_01681;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;Dbxref=GO:0003916,GO:0003918,GO:0006265,GO:0009330;gene=gyrA;Parent=GCA008085315_01681_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0188,COG:L,KEGG:K02469,RefSeq:WP_005547932.1,SO:0001217,UniParc:UPI00022C01CD,UniRef:UniRef100_UPI00022C01CD,UniRef:UniRef50_Q89AS3,UniRef:UniRef90_G4A762;ec_number=5.6.2.2 contig_21 Pyrodigal gene 54870 55310 . - . ID=GCA008085315_01682_gene;locus_tag=GCA008085315_01682;gene=fur contig_21 Pyrodigal CDS 54870 55310 . - 0 ID=GCA008085315_01682;Name=ferric iron uptake transcriptional regulator;locus_tag=GCA008085315_01682;product=ferric iron uptake transcriptional regulator;Dbxref=GO:0003700,GO:0006355;gene=fur;Parent=GCA008085315_01682_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0735,COG:P,RefSeq:WP_005540878.1,SO:0001217,UniParc:UPI00000AF992,UniRef:UniRef100_Q8L3M2,UniRef:UniRef50_P0A9A9,UniRef:UniRef90_Q8L3M2 contig_21 Pyrodigal gene 55329 55853 . - . ID=GCA008085315_01683_gene;locus_tag=GCA008085315_01683;gene=fldA contig_21 Pyrodigal CDS 55329 55853 . - 0 ID=GCA008085315_01683;Name=flavodoxin FldA;locus_tag=GCA008085315_01683;product=flavodoxin FldA;gene=fldA;Parent=GCA008085315_01683_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0716,RefSeq:WP_005547930.1,SO:0001217,UniParc:UPI00000B8210,UniRef:UniRef100_Q8L3L9,UniRef:UniRef50_Q8ZQX1,UniRef:UniRef90_A0A142FXK4 contig_21 Pyrodigal gene 56273 57073 . - . ID=GCA008085315_01684_gene;locus_tag=GCA008085315_01684;gene=menH contig_21 Pyrodigal CDS 56273 57073 . - 0 ID=GCA008085315_01684;Name=Alpha/beta fold hydrolase;locus_tag=GCA008085315_01684;product=Alpha/beta fold hydrolase;gene=menH;Parent=GCA008085315_01684_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0596,COG:HR,RefSeq:WP_005568364.1,SO:0001217,UniParc:UPI00022AD0E8,UniRef:UniRef100_UPI00022AD0E8,UniRef:UniRef50_Q57427,UniRef:UniRef90_A0A142FXK3 contig_21 Pyrodigal gene 57160 57777 . + . ID=GCA008085315_01685_gene;locus_tag=GCA008085315_01685;gene=seqA contig_21 Pyrodigal CDS 57160 57777 . + 0 ID=GCA008085315_01685;Name=replication initiation negative regulator SeqA;locus_tag=GCA008085315_01685;product=replication initiation negative regulator SeqA;Dbxref=GO:0003677,GO:0032297;gene=seqA;Parent=GCA008085315_01685_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3057,COG:L,KEGG:K03645,RefSeq:WP_005547928.1,SO:0001217,UniParc:UPI0001B9F76A,UniRef:UniRef100_UPI0001B9F76A,UniRef:UniRef50_Q65U90,UniRef:UniRef90_A0A142FXK2 contig_21 Pyrodigal gene 57783 59198 . + . ID=GCA008085315_01686_gene;locus_tag=GCA008085315_01686;gene=menE contig_21 Pyrodigal CDS 57783 59198 . + 0 ID=GCA008085315_01686;Name=o-succinylbenzoate--CoA ligase;locus_tag=GCA008085315_01686;product=o-succinylbenzoate--CoA ligase;Dbxref=GO:0005524,GO:0008756,GO:0009234;gene=menE;Parent=GCA008085315_01686_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148320980.1,SO:0001217,UniParc:UPI0011D980DE,UniRef:UniRef100_UPI0011D980DE,UniRef:UniRef50_P44565,UniRef:UniRef90_A0A5D0EMW0;ec_number=6.2.1.26 contig_21 Pyrodigal gene 59207 62530 . + . ID=GCA008085315_01687_gene;locus_tag=GCA008085315_01687;gene=mscK contig_21 Pyrodigal CDS 59207 62530 . + 0 ID=GCA008085315_01687;Name=mechanosensitive channel MscK;locus_tag=GCA008085315_01687;product=mechanosensitive channel MscK;Dbxref=GO:0016020,GO:0055085;gene=mscK;Parent=GCA008085315_01687_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3264,COG:M,KEGG:K05802,RefSeq:WP_012821059.1,SO:0001217,UniParc:UPI0001B9F768,UniRef:UniRef100_UPI0001B9F768,UniRef:UniRef50_Q57362,UniRef:UniRef90_A0A5D0EN54 contig_21 Pyrodigal gene 62552 63625 . + . ID=GCA008085315_01688_gene;locus_tag=GCA008085315_01688;gene=aroC contig_21 Pyrodigal CDS 62552 63625 . + 0 ID=GCA008085315_01688;Name=chorismate synthase;locus_tag=GCA008085315_01688;product=chorismate synthase;Dbxref=GO:0004107,GO:0005829,GO:0008652,GO:0009073,GO:0009423,GO:0010181;gene=aroC;Parent=GCA008085315_01688_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0082,COG:E,KEGG:K01736,RefSeq:WP_005547924.1,SO:0001217,UniParc:UPI0000E1B926,UniRef:UniRef100_UPI0000E1B926,UniRef:UniRef50_P43875,UniRef:UniRef90_P43875;ec_number=4.2.3.5 contig_21 Pyrodigal gene 63647 64519 . + . ID=GCA008085315_01689_gene;locus_tag=GCA008085315_01689;gene=mepA contig_21 Pyrodigal CDS 63647 64519 . + 0 ID=GCA008085315_01689;Name=penicillin-insensitive murein endopeptidase;locus_tag=GCA008085315_01689;product=penicillin-insensitive murein endopeptidase;Dbxref=GO:0004252,GO:0006508,GO:0030288;gene=mepA;Parent=GCA008085315_01689_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3770,COG:M,KEGG:K07261,RefSeq:WP_005547922.1,SO:0001217,UniParc:UPI0001B9F767,UniRef:UniRef100_UPI0001B9F767,UniRef:UniRef50_P44566,UniRef:UniRef90_A0A142FXJ8;ec_number=3.4.24.- contig_21 Pyrodigal gene 64523 65290 . + . ID=GCA008085315_01690_gene;locus_tag=GCA008085315_01690;gene=tauE contig_21 Pyrodigal CDS 64523 65290 . + 0 ID=GCA008085315_01690;Name=putative membrane transporter protein;locus_tag=GCA008085315_01690;product=putative membrane transporter protein;gene=tauE;Parent=GCA008085315_01690_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0730,COG:P,RefSeq:WP_005547920.1,SO:0001217,UniParc:UPI0001B9F766,UniRef:UniRef100_UPI0001B9F766,UniRef:UniRef50_H5UXY0,UniRef:UniRef90_E6KWV2 contig_21 Pyrodigal gene 65406 66362 . + . ID=GCA008085315_01691_gene;locus_tag=GCA008085315_01691;gene=lpxM contig_21 Pyrodigal CDS 65406 66362 . + 0 ID=GCA008085315_01691;Name=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;locus_tag=GCA008085315_01691;product=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;Dbxref=GO:0009103,GO:0009276,GO:0016020,GO:0016747;gene=lpxM;Parent=GCA008085315_01691_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1560,COG:I,KEGG:K02517,RefSeq:WP_005547918.1,SO:0001217,UniParc:UPI0001B9F765,UniRef:UniRef100_UPI0001B9F765,UniRef:UniRef50_P44567,UniRef:UniRef90_E6KWV3;ec_number=2.3.1.243 contig_21 Pyrodigal gene 66453 66995 . + . ID=GCA008085315_01692_gene;locus_tag=GCA008085315_01692;gene=apt contig_21 Pyrodigal CDS 66453 66995 . + 0 ID=GCA008085315_01692;Name=adenine phosphoribosyltransferase;locus_tag=GCA008085315_01692;product=adenine phosphoribosyltransferase;Dbxref=GO:0003999,GO:0006168;gene=apt;Parent=GCA008085315_01692_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0503,COG:F,KEGG:K00759,SO:0001217,UniParc:UPI00022ABDA3,UniRef:UniRef100_A0A142G378,UniRef:UniRef50_P69503,UniRef:UniRef90_A0A8B2UAA6;ec_number=2.4.2.7 contig_21 Pyrodigal gene 67028 69073 . + . ID=GCA008085315_01693_gene;locus_tag=GCA008085315_01693;gene=dnaX contig_21 Pyrodigal CDS 67028 69073 . + 0 ID=GCA008085315_01693;Name=DNA polymerase III subunit gamma/tau;locus_tag=GCA008085315_01693;product=DNA polymerase III subunit gamma/tau;Dbxref=GO:0003677,GO:0003887,GO:0005524,GO:0006260,GO:0009360;gene=dnaX;Parent=GCA008085315_01693_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2812,COG:L,KEGG:K02343,RefSeq:WP_148333986.1,SO:0001217,UniParc:UPI0011D413EF,UniRef:UniRef100_UPI0011D413EF,UniRef:UniRef50_P43746,UniRef:UniRef90_A0A5D0EMW8;ec_number=2.7.7.7 contig_21 Pyrodigal gene 69073 69966 . + . ID=GCA008085315_01694_gene;locus_tag=GCA008085315_01694;gene=yafD contig_21 Pyrodigal CDS 69073 69966 . + 0 ID=GCA008085315_01694;Name=endonuclease/exonuclease/phosphatase family protein;locus_tag=GCA008085315_01694;product=endonuclease/exonuclease/phosphatase family protein;gene=yafD;Parent=GCA008085315_01694_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3021,COG:R,RefSeq:WP_005589124.1,SO:0001217,UniParc:UPI00022C02C2,UniRef:UniRef100_UPI00022C02C2,UniRef:UniRef50_A0A5D0EMX3,UniRef:UniRef90_A0A5D0EMX3 contig_21 Pyrodigal gene 70292 71062 . + . ID=GCA008085315_01695_gene;locus_tag=GCA008085315_01695 contig_21 Pyrodigal CDS 70292 71062 . + 0 ID=GCA008085315_01695;Name=Glycosyltransferase family 2 protein;locus_tag=GCA008085315_01695;product=Glycosyltransferase family 2 protein;Parent=GCA008085315_01695_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A5D0KZC5 contig_21 Pyrodigal gene 71065 71520 . + . ID=GCA008085315_01696_gene;locus_tag=GCA008085315_01696 contig_21 Pyrodigal CDS 71065 71520 . + 0 ID=GCA008085315_01696;Name=hypothetical protein;locus_tag=GCA008085315_01696;product=hypothetical protein;Parent=GCA008085315_01696_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005589126.1,SO:0001217,UniParc:UPI0001B9F75F,UniRef:UniRef100_UPI0001B9F75F,UniRef:UniRef50_UPI0011DC244D,UniRef:UniRef90_UPI0011DC244D contig_21 Pyrodigal gene 71898 72581 . + . ID=GCA008085315_01697_gene;locus_tag=GCA008085315_01697 contig_21 Pyrodigal CDS 71898 72581 . + 0 ID=GCA008085315_01697;Name=hypothetical protein;locus_tag=GCA008085315_01697;product=hypothetical protein;Parent=GCA008085315_01697_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_233443273.1,SO:0001217,UniParc:UPI001F472F3F,UniRef:UniRef100_UPI001F472F3F,UniRef:UniRef50_UPI001F17B657,UniRef:UniRef90_UPI001F17B657 contig_21 Pyrodigal gene 72651 73004 . - . ID=GCA008085315_01698_gene;locus_tag=GCA008085315_01698;gene=ridA contig_21 Pyrodigal CDS 72651 73004 . - 0 ID=GCA008085315_01698;Name=Putative translation initiation inhibitor%2C YjgF family protein;locus_tag=GCA008085315_01698;product=Putative translation initiation inhibitor%2C YjgF family protein;gene=ridA;Parent=GCA008085315_01698_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0251,COG:V,RefSeq:WP_005568378.1,SO:0001217,UniParc:UPI00022ADBBD,UniRef:UniRef100_UPI00022ADBBD,UniRef:UniRef50_P71394,UniRef:UniRef90_G4A779 contig_21 Pyrodigal gene 73106 73822 . + . ID=GCA008085315_01699_gene;locus_tag=GCA008085315_01699 contig_21 Pyrodigal CDS 73106 73822 . + 0 ID=GCA008085315_01699;Name=Sugar phosphate permease%2C required for N-linked glycosylation;locus_tag=GCA008085315_01699;product=Sugar phosphate permease%2C required for N-linked glycosylation;Parent=GCA008085315_01699_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005547897.1,SO:0001217,UniParc:UPI0001B9F75C,UniRef:UniRef100_UPI0001B9F75C,UniRef:UniRef50_U1R1T3,UniRef:UniRef90_G4A780 contig_21 Pyrodigal gene 73819 74538 . + . ID=GCA008085315_01700_gene;locus_tag=GCA008085315_01700;gene=tPR contig_21 Pyrodigal CDS 73819 74538 . + 0 ID=GCA008085315_01700;Name=tetratricopeptide repeat protein;locus_tag=GCA008085315_01700;product=tetratricopeptide repeat protein;gene=tPR;Parent=GCA008085315_01700_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0790,COG:R,RefSeq:WP_005547895.1,SO:0001217,UniParc:UPI00022ADBBF,UniRef:UniRef100_UPI00022ADBBF,UniRef:UniRef50_A0A336N8C1,UniRef:UniRef90_UPI00022ADBBF contig_21 Pyrodigal gene 74589 75200 . - . ID=GCA008085315_01701_gene;locus_tag=GCA008085315_01701 contig_21 Pyrodigal CDS 74589 75200 . - 0 ID=GCA008085315_01701;Name=glutathione S-transferase family protein;locus_tag=GCA008085315_01701;product=glutathione S-transferase family protein;Parent=GCA008085315_01701_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005544647.1,SO:0001217,UniParc:UPI0001B9F75A,UniRef:UniRef100_UPI0001B9F75A,UniRef:UniRef90_D4EC70 contig_21 Pyrodigal gene 75484 77739 . - . ID=GCA008085315_01702_gene;locus_tag=GCA008085315_01702;gene=parC contig_21 Pyrodigal CDS 75484 77739 . - 0 ID=GCA008085315_01702;Name=DNA topoisomerase IV subunit A;locus_tag=GCA008085315_01702;product=DNA topoisomerase IV subunit A;Dbxref=GO:0003918,GO:0006265,GO:0009340;gene=parC;Parent=GCA008085315_01702_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0188,COG:L,RefSeq:WP_148333987.1,SO:0001217,UniParc:UPI0011D8D9B6,UniRef:UniRef100_UPI0011D8D9B6,UniRef:UniRef50_P0AFI2,UniRef:UniRef90_A0A5D0EP49;ec_number=5.6.2.2 contig_21 Pyrodigal gene 78276 80174 . - . ID=GCA008085315_01703_gene;locus_tag=GCA008085315_01703;gene=parE contig_21 Pyrodigal CDS 78276 80174 . - 0 ID=GCA008085315_01703;Name=DNA topoisomerase IV subunit B;locus_tag=GCA008085315_01703;product=DNA topoisomerase IV subunit B;Dbxref=GO:0003677,GO:0003918,GO:0005524,GO:0005694,GO:0006265;gene=parE;Parent=GCA008085315_01703_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0187,COG:L,RefSeq:WP_148320975.1,SO:0001217,UniParc:UPI0011D3FA59,UniRef:UniRef100_UPI0011D3FA59,UniRef:UniRef50_A0A0J9WZF0,UniRef:UniRef90_A0A5D0EP28;ec_number=5.6.2.2 contig_21 Pyrodigal gene 80677 81564 . + . ID=GCA008085315_01704_gene;locus_tag=GCA008085315_01704 contig_21 Pyrodigal CDS 80677 81564 . + 0 ID=GCA008085315_01704;Name=Trimeric autotransporter adhesin YadA-like C-terminal membrane anchor domain-containing protein;locus_tag=GCA008085315_01704;product=Trimeric autotransporter adhesin YadA-like C-terminal membrane anchor domain-containing protein;Parent=GCA008085315_01704_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148320974.1,SO:0001217,UniParc:UPI0011D5D211,UniRef:UniRef100_UPI0011D5D211,UniRef:UniRef50_A0A142FY60,UniRef:UniRef90_A0A142FY60 contig_21 Pyrodigal gene 81668 83338 . - . ID=GCA008085315_01705_gene;locus_tag=GCA008085315_01705;gene=ettA contig_21 Pyrodigal CDS 81668 83338 . - 0 ID=GCA008085315_01705;Name=energy-dependent translational throttle protein EttA;locus_tag=GCA008085315_01705;product=energy-dependent translational throttle protein EttA;Dbxref=GO:0000049,GO:0003689,GO:0005524,GO:0005737,GO:0006412,GO:0016887,GO:0019843,GO:0043022,GO:0045900,GO:0061775,GO:0140584,GO:0140665,GO:0140849;gene=ettA;Parent=GCA008085315_01705_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0488,COG:R,RefSeq:WP_005566523.1,SO:0001217,UniParc:UPI00022AD876,UniRef:UniRef100_UPI00022AD876,UniRef:UniRef50_P45127,UniRef:UniRef90_P45127;ec_number=3.6.1.- contig_21 Pyrodigal gene 83553 83699 . + . ID=GCA008085315_01706_gene;locus_tag=GCA008085315_01706 contig_21 Pyrodigal CDS 83553 83699 . + 0 ID=GCA008085315_01706;Name=hypothetical protein;locus_tag=GCA008085315_01706;product=hypothetical protein;Parent=GCA008085315_01706_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_E6KWW5,UniRef:UniRef90_G4A787 contig_21 Pyrodigal gene 83717 84382 . + . ID=GCA008085315_01707_gene;locus_tag=GCA008085315_01707;gene=zevA contig_21 Pyrodigal CDS 83717 84382 . + 0 ID=GCA008085315_01707;Name=zinc transporter binding subunit ZevA;locus_tag=GCA008085315_01707;product=zinc transporter binding subunit ZevA;gene=zevA;Parent=GCA008085315_01707_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_005694310,COG:COG3683,COG:R,RefSeq:WP_012821052.1,SO:0001217,UniParc:UPI0001B9F754,UniRef:UniRef100_UPI0001B9F754,UniRef:UniRef50_P44137,UniRef:UniRef90_G4A788 contig_21 Pyrodigal gene 84397 85428 . + . ID=GCA008085315_01708_gene;locus_tag=GCA008085315_01708;gene=zevB contig_21 Pyrodigal CDS 84397 85428 . + 0 ID=GCA008085315_01708;Name=zinc transporter permease subunit ZevB;locus_tag=GCA008085315_01708;product=zinc transporter permease subunit ZevB;gene=zevB;Parent=GCA008085315_01708_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=BlastRules:WP_005694309,COG:COG2215,COG:P,RefSeq:WP_005551275.1,SO:0001217,UniParc:UPI0001B9F753,UniRef:UniRef100_A0A142G388,UniRef:UniRef50_P44136,UniRef:UniRef90_A0A142G388 contig_21 tRNAscan-SE gene 85561 85636 . - . ID=GCA008085315_01709_gene;locus_tag=GCA008085315_01709;gene=trnN contig_21 tRNAscan-SE tRNA 85561 85636 . - . ID=GCA008085315_01709;Name=tRNA-Asn(gtt);locus_tag=GCA008085315_01709;product=tRNA-Asn(gtt);gene=trnN;anti_codon=gtt;amino_acid=Asn;Parent=GCA008085315_01709_gene;inference=profile:tRNAscan:2.0;Note=SO:0000257 contig_21 Pyrodigal gene 86040 88082 . + . ID=GCA008085315_01710_gene;locus_tag=GCA008085315_01710;gene=uvrB contig_21 Pyrodigal CDS 86040 88082 . + 0 ID=GCA008085315_01710;Name=excinuclease ABC subunit UvrB;locus_tag=GCA008085315_01710;product=excinuclease ABC subunit UvrB;Dbxref=GO:0003677,GO:0005524,GO:0005737,GO:0006289,GO:0009380,GO:0009381,GO:0009432,GO:0016887;gene=uvrB;Parent=GCA008085315_01710_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0556,COG:L,KEGG:K03702,RefSeq:WP_148320973.1,SO:0001217,UniParc:UPI0011D5317C,UniRef:UniRef100_UPI0011D5317C,UniRef:UniRef50_P0A8F8,UniRef:UniRef90_Q65ST2 contig_21 Pyrodigal gene 88309 89379 . + . ID=GCA008085315_01711_gene;locus_tag=GCA008085315_01711;gene=ompA contig_21 Pyrodigal CDS 88309 89379 . + 0 ID=GCA008085315_01711;Name=porin OmpA;locus_tag=GCA008085315_01711;product=porin OmpA;Dbxref=GO:0015288;gene=ompA;Parent=GCA008085315_01711_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2885,COG:M,RefSeq:WP_148320972.1,SO:0001217,UniParc:UPI0011DA5A04,UniRef:UniRef100_UPI0011DA5A04,UniRef:UniRef50_P45996,UniRef:UniRef90_A0A142FY56 contig_21 Pyrodigal gene 90055 91521 . - . ID=GCA008085315_01712_gene;locus_tag=GCA008085315_01712;gene=ptsG2 contig_21 Pyrodigal CDS 90055 91521 . - 0 ID=GCA008085315_01712;Name=PTS family N-acetylglucosamine-specific porter component IIBC;locus_tag=GCA008085315_01712;product=PTS family N-acetylglucosamine-specific porter component IIBC;gene=ptsG2;Parent=GCA008085315_01712_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1264,COG:G,RefSeq:WP_148320971.1,SO:0001217,UniParc:UPI0011D9B80E,UniRef:UniRef100_UPI0011D9B80E,UniRef:UniRef50_K8EPU8,UniRef:UniRef90_E6KYJ1 contig_21 Pyrodigal gene 91771 92901 . - . ID=GCA008085315_01713_gene;locus_tag=GCA008085315_01713;gene=nanM contig_21 Pyrodigal CDS 91771 92901 . - 0 ID=GCA008085315_01713;Name=N-acetylneuraminate epimerase;locus_tag=GCA008085315_01713;product=N-acetylneuraminate epimerase;gene=nanM;Parent=GCA008085315_01713_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3055,COG:M,KEGG:K17948,RefSeq:WP_005547122.1,SO:0001217,UniParc:UPI0001B9F6EC,UniRef:UniRef100_UPI0001B9F6EC,UniRef:UniRef50_P44544,UniRef:UniRef90_A0A142FY34;ec_number=5.1.3.24 contig_21 Pyrodigal gene 93040 94890 . - . ID=GCA008085315_01714_gene;locus_tag=GCA008085315_01714;gene=dctM contig_21 Pyrodigal CDS 93040 94890 . - 0 ID=GCA008085315_01714;Name=Sialic acid TRAP transporter permease protein;locus_tag=GCA008085315_01714;product=Sialic acid TRAP transporter permease protein;gene=dctM;Parent=GCA008085315_01714_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3090,COG:G,RefSeq:WP_005588244.1,SO:0001217,UniParc:UPI0001B9F6EB,UniRef:UniRef100_UPI0001B9F6EB,UniRef:UniRef50_P44543,UniRef:UniRef90_F9GP20 contig_21 Pyrodigal gene 94954 95940 . - . ID=GCA008085315_01715_gene;locus_tag=GCA008085315_01715;gene=dctP contig_21 Pyrodigal CDS 94954 95940 . - 0 ID=GCA008085315_01715;Name=Neu5Ac-binding protein;locus_tag=GCA008085315_01715;product=Neu5Ac-binding protein;gene=dctP;Parent=GCA008085315_01715_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1638,COG:G,RefSeq:WP_148333988.1,SO:0001217,UniParc:UPI0011DBC5C1,UniRef:UniRef100_UPI0011DBC5C1,UniRef:UniRef50_P44542,UniRef:UniRef90_A0A336N4V7 contig_21 Infernal gene 94973 95089 . + . ID=GCA008085315_01716_gene;locus_tag=GCA008085315_01716;gene=AaHKsRNA96 contig_21 Infernal ncRNA 94973 95089 8.1e-26 + . ID=GCA008085315_01716;Name=Aggregatibacter sRNA 96;locus_tag=GCA008085315_01716;product=Aggregatibacter sRNA 96;Dbxref=RFAM:RF02903;Parent=GCA008085315_01716_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02903 contig_21 Pyrodigal gene 96181 96882 . + . ID=GCA008085315_01717_gene;locus_tag=GCA008085315_01717;gene=nanE contig_21 Pyrodigal CDS 96181 96882 . + 0 ID=GCA008085315_01717;Name=Putative N-acetylmannosamine-6-phosphate 2-epimerase;locus_tag=GCA008085315_01717;product=Putative N-acetylmannosamine-6-phosphate 2-epimerase;gene=nanE;Parent=GCA008085315_01717_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3010,COG:G,KEGG:K01788,RefSeq:WP_005547125.1,SO:0001217,UniParc:UPI0001B9F6E9,UniRef:UniRef100_UPI0001B9F6E9,UniRef:UniRef50_P71340,UniRef:UniRef90_A0A142FY31;ec_number=5.1.3.9 contig_21 Pyrodigal gene 96899 97783 . + . ID=GCA008085315_01718_gene;locus_tag=GCA008085315_01718;gene=nagC contig_21 Pyrodigal CDS 96899 97783 . + 0 ID=GCA008085315_01718;Name=N-acetylmannosamine kinase;locus_tag=GCA008085315_01718;product=N-acetylmannosamine kinase;gene=nagC;Parent=GCA008085315_01718_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1940,COG:GK,KEGG:K00885,RefSeq:WP_005547126.1,SO:0001217,UniParc:UPI00022AD347,UniRef:UniRef100_UPI00022AD347,UniRef:UniRef50_Q8ZCG9,UniRef:UniRef90_A0A5D0EJJ8;ec_number=2.7.1.60 contig_21 Pyrodigal gene 97793 98662 . + . ID=GCA008085315_01719_gene;locus_tag=GCA008085315_01719;gene=rpiR contig_21 Pyrodigal CDS 97793 98662 . + 0 ID=GCA008085315_01719;Name=MurR/RpiR family transcriptional regulator;locus_tag=GCA008085315_01719;product=MurR/RpiR family transcriptional regulator;gene=rpiR;Parent=GCA008085315_01719_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1737,COG:K,RefSeq:WP_005547127.1,SO:0001217,UniParc:UPI0001B9F6E7,UniRef:UniRef100_UPI0001B9F6E7,UniRef:UniRef50_P44540,UniRef:UniRef90_A0A142FY30 contig_21 Pyrodigal gene 98672 99550 . + . ID=GCA008085315_01720_gene;locus_tag=GCA008085315_01720;gene=nanA contig_21 Pyrodigal CDS 98672 99550 . + 0 ID=GCA008085315_01720;Name=N-acetylneuraminate lyase;locus_tag=GCA008085315_01720;product=N-acetylneuraminate lyase;Dbxref=GO:0005829,GO:0005975,GO:0008747,GO:0019262;gene=nanA;Parent=GCA008085315_01720_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0329,COG:EM,RefSeq:WP_148333989.1,SO:0001217,UniParc:UPI0011D73652,UniRef:UniRef100_UPI0011D73652,UniRef:UniRef50_Q2G160,UniRef:UniRef90_Q9CKB0;ec_number=4.1.3.3 contig_21 Pyrodigal gene 99705 100508 . + . ID=GCA008085315_01721_gene;locus_tag=GCA008085315_01721;gene=nagB contig_21 Pyrodigal CDS 99705 100508 . + 0 ID=GCA008085315_01721;Name=glucosamine-6-phosphate deaminase;locus_tag=GCA008085315_01721;product=glucosamine-6-phosphate deaminase;Dbxref=GO:0004342,GO:0006044;gene=nagB;Parent=GCA008085315_01721_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0363,COG:G,RefSeq:WP_148333990.1,SO:0001217,UniParc:UPI0011D795FA,UniRef:UniRef100_UPI0011D795FA,UniRef:UniRef50_O30564,UniRef:UniRef90_G4A8B9;ec_number=3.5.99.6 contig_21 Pyrodigal gene 100564 101709 . + . ID=GCA008085315_01722_gene;locus_tag=GCA008085315_01722;gene=nagA contig_21 Pyrodigal CDS 100564 101709 . + 0 ID=GCA008085315_01722;Name=N-acetylglucosamine-6-phosphate deacetylase;locus_tag=GCA008085315_01722;product=N-acetylglucosamine-6-phosphate deacetylase;Dbxref=GO:0006044,GO:0008448;gene=nagA;Parent=GCA008085315_01722_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1820,COG:G,KEGG:K01443,RefSeq:WP_148321390.1,SO:0001217,UniParc:UPI0011DAC59A,UniRef:UniRef100_UPI0011DAC59A,UniRef:UniRef50_P44537,UniRef:UniRef90_A0A142FY27;ec_number=3.5.1.25 contig_21 Pyrodigal gene 101914 102414 . - . ID=GCA008085315_01723_gene;locus_tag=GCA008085315_01723;gene=tpx contig_21 Pyrodigal CDS 101914 102414 . - 0 ID=GCA008085315_01723;Name=thiol peroxidase;locus_tag=GCA008085315_01723;product=thiol peroxidase;Dbxref=GO:0008379,GO:0016684;gene=tpx;Parent=GCA008085315_01723_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2077,COG:O,KEGG:K11065,RefSeq:WP_005547131.1,SO:0001217,UniParc:UPI0001B9F6E3,UniRef:UniRef100_UPI0001B9F6E3,UniRef:UniRef50_P0A862,UniRef:UniRef90_A0A142FY26;ec_number=1.11.1.24 contig_21 Pyrodigal gene 102455 103519 . - . ID=GCA008085315_01724_gene;locus_tag=GCA008085315_01724;gene=hemH contig_21 Pyrodigal CDS 102455 103519 . - 0 ID=GCA008085315_01724;Name=ferrochelatase;locus_tag=GCA008085315_01724;product=ferrochelatase;Dbxref=GO:0004325,GO:0006779;gene=hemH;Parent=GCA008085315_01724_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0276,COG:H,KEGG:K01772,RefSeq:WP_005547132.1,SO:0001217,UniParc:UPI0001B9F6E2,UniRef:UniRef100_UPI0001B9F6E2,UniRef:UniRef50_P43868,UniRef:UniRef90_A0A5D0EIM9;ec_number=4.99.1.9 contig_21 Pyrodigal gene 103512 103934 . - . ID=GCA008085315_01725_gene;locus_tag=GCA008085315_01725;gene=paaI contig_21 Pyrodigal CDS 103512 103934 . - 0 ID=GCA008085315_01725;Name=Esterase;locus_tag=GCA008085315_01725;product=Esterase;gene=paaI;Parent=GCA008085315_01725_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2050,COG:Q,RefSeq:WP_005547133.1,SO:0001217,UniParc:UPI0001B9F6E1,UniRef:UniRef100_UPI0001B9F6E1,UniRef:UniRef50_P45083,UniRef:UniRef90_A0A5D0EIZ1 contig_21 Pyrodigal gene 103944 107042 . - . ID=GCA008085315_01726_gene;locus_tag=GCA008085315_01726;gene=glcD contig_21 Pyrodigal CDS 103944 107042 . - 0 ID=GCA008085315_01726;Name=FAD-binding oxidoreductase;locus_tag=GCA008085315_01726;product=FAD-binding oxidoreductase;gene=glcD;Parent=GCA008085315_01726_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0277,KEGG:K26063,RefSeq:WP_080996902.1,SO:0001217,UniParc:UPI0009BA9CD2,UniRef:UniRef100_UPI0009BA9CD2,UniRef:UniRef50_Q57252,UniRef:UniRef90_A0A142FY23;ec_number=1.1.-.- contig_21 Pyrodigal gene 107483 108523 . + . ID=GCA008085315_01727_gene;locus_tag=GCA008085315_01727;gene=ompA contig_21 Pyrodigal CDS 107483 108523 . + 0 ID=GCA008085315_01727;Name=porin OmpA;locus_tag=GCA008085315_01727;product=porin OmpA;Dbxref=GO:0015288;gene=ompA;Parent=GCA008085315_01727_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2885,COG:M,RefSeq:WP_005547135.1,SO:0001217,UniParc:UPI00000B8408,UniRef:UniRef100_O51841,UniRef:UniRef50_P45996,UniRef:UniRef90_O51841 contig_21 Pyrodigal gene 108865 109194 . + . ID=GCA008085315_01728_gene;locus_tag=GCA008085315_01728;gene=grxD contig_21 Pyrodigal CDS 108865 109194 . + 0 ID=GCA008085315_01728;Name=Grx4 family monothiol glutaredoxin;locus_tag=GCA008085315_01728;product=Grx4 family monothiol glutaredoxin;Dbxref=GO:0009055;gene=grxD;Parent=GCA008085315_01728_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0278,COG:O,RefSeq:WP_005538743.1,SO:0001217,UniParc:UPI0001AAE245,UniRef:UniRef100_A0A142FY21,UniRef:UniRef50_P45085,UniRef:UniRef90_A0A142FY21 contig_21 Pyrodigal gene 109319 109771 . + . ID=GCA008085315_01729_gene;locus_tag=GCA008085315_01729;gene=yeaL contig_21 Pyrodigal CDS 109319 109771 . + 0 ID=GCA008085315_01729;Name=UPF0756 membrane protein ACT75_01565;locus_tag=GCA008085315_01729;product=UPF0756 membrane protein ACT75_01565;gene=yeaL;Parent=GCA008085315_01729_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2707,COG:S,RefSeq:WP_005547136.1,SO:0001217,UniParc:UPI0001B9F6DF,UniRef:UniRef100_UPI0001B9F6DF,UniRef:UniRef50_C6AMB3,UniRef:UniRef90_A0A142FY20 contig_21 Pyrodigal gene 109772 110161 . + . ID=GCA008085315_01730_gene;locus_tag=GCA008085315_01730;gene=ygdD contig_21 Pyrodigal CDS 109772 110161 . + 0 ID=GCA008085315_01730;Name=DUF423 domain-containing protein;locus_tag=GCA008085315_01730;product=DUF423 domain-containing protein;gene=ygdD;Parent=GCA008085315_01730_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2363,COG:S,RefSeq:WP_148320969.1,SO:0001217,UniParc:UPI0011D4835E,UniRef:UniRef100_UPI0011D4835E,UniRef:UniRef50_P45019,UniRef:UniRef90_A0A142FY19 contig_21 Pyrodigal gene 110158 114069 . + . ID=GCA008085315_01731_gene;locus_tag=GCA008085315_01731;gene=hrpA contig_21 Pyrodigal CDS 110158 114069 . + 0 ID=GCA008085315_01731;Name=ATP-dependent RNA helicase HrpA;locus_tag=GCA008085315_01731;product=ATP-dependent RNA helicase HrpA;Dbxref=GO:0003676,GO:0003689,GO:0003723,GO:0003724,GO:0004386,GO:0005524,GO:0016887,GO:0061775,GO:0140584,GO:0140665,GO:0140849;gene=hrpA;Parent=GCA008085315_01731_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1643,COG:J,RefSeq:WP_148321388.1,SO:0001217,UniParc:UPI0011D90353,UniRef:UniRef100_UPI0011D90353,UniRef:UniRef50_P45018,UniRef:UniRef90_P45018;ec_number=3.6.4.13 contig_21 Pyrodigal gene 114512 115429 . + . ID=GCA008085315_01732_gene;locus_tag=GCA008085315_01732;pseudogene=unitary contig_21 Pyrodigal CDS 114512 115429 . + 0 ID=GCA008085315_01732;Name=hypothetical protein;locus_tag=GCA008085315_01732;product=hypothetical protein;pseudogene=unitary;Parent=GCA008085315_01732_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A377JFF4,UniRef:UniRef50_UPI001E3863CC,UniRef:UniRef90_UPI00022ADB41 contig_21 Pyrodigal gene 115531 116679 . + . ID=GCA008085315_01733_gene;locus_tag=GCA008085315_01733 contig_21 Pyrodigal CDS 115531 116679 . + 0 ID=GCA008085315_01733;Name=IS4 family transposase;locus_tag=GCA008085315_01733;product=IS4 family transposase;Dbxref=GO:0004803;Parent=GCA008085315_01733_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148333991.1,SO:0001217,UniParc:UPI0011D583A0,UniRef:UniRef100_UPI0011D583A0,UniRef:UniRef50_A0A336N5S0,UniRef:UniRef90_A0A336N5S0 contig_21 Pyrodigal gene 116871 117536 . - . ID=GCA008085315_01734_gene;locus_tag=GCA008085315_01734;gene=ycjU contig_21 Pyrodigal CDS 116871 117536 . - 0 ID=GCA008085315_01734;Name=phosphoglycolate phosphatase;locus_tag=GCA008085315_01734;product=phosphoglycolate phosphatase;gene=ycjU;Parent=GCA008085315_01734_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0637,COG:G,RefSeq:WP_005547143.1,SO:0001217,UniParc:UPI0001B9F6D9,UniRef:UniRef100_UPI0001B9F6D9,UniRef:UniRef50_A0A5D0EIM5,UniRef:UniRef90_A0A5D0EIM5 contig_21 Pyrodigal gene 117864 118175 . - . ID=GCA008085315_01735_gene;locus_tag=GCA008085315_01735;gene=cytC553 contig_21 Pyrodigal CDS 117864 118175 . - 0 ID=GCA008085315_01735;Name=C-type cytochrome;locus_tag=GCA008085315_01735;product=C-type cytochrome;gene=cytC553;Parent=GCA008085315_01735_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG2863,RefSeq:WP_005566566.1,SO:0001217,UniParc:UPI0001B9F6D8,UniRef:UniRef100_UPI0001B9F6D8,UniRef:UniRef50_E6KY88,UniRef:UniRef90_A0A5D0EIM1 contig_21 Pyrodigal gene 118182 118673 . - . ID=GCA008085315_01736_gene;locus_tag=GCA008085315_01736;gene=trxA contig_21 Pyrodigal CDS 118182 118673 . - 0 ID=GCA008085315_01736;Name=Thioredoxin;locus_tag=GCA008085315_01736;product=Thioredoxin;gene=trxA;Parent=GCA008085315_01736_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0526,COG:O,RefSeq:WP_019518224.1,SO:0001217,UniParc:UPI00037BC4DA,UniRef:UniRef100_UPI00037BC4DA,UniRef:UniRef50_C9PQ98,UniRef:UniRef90_A0A142FY14 contig_21 Pyrodigal gene 118663 119334 . - . ID=GCA008085315_01737_gene;locus_tag=GCA008085315_01737;gene=lolD contig_21 Pyrodigal CDS 118663 119334 . - 0 ID=GCA008085315_01737;Name=ABC transporter ATP-binding protein;locus_tag=GCA008085315_01737;product=ABC transporter ATP-binding protein;gene=lolD;Parent=GCA008085315_01737_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1136,COG:M,RefSeq:WP_148321386.1,SO:0001217,UniParc:UPI0011DA93DF,UniRef:UniRef100_UPI0011DA93DF,UniRef:UniRef50_B1VCI6,UniRef:UniRef90_A0A0F5EYC3 contig_21 Pyrodigal gene 119336 120475 . - . ID=GCA008085315_01738_gene;locus_tag=GCA008085315_01738;gene=lolE contig_21 Pyrodigal CDS 119336 120475 . - 0 ID=GCA008085315_01738;Name=ABC transporter permease;locus_tag=GCA008085315_01738;product=ABC transporter permease;gene=lolE;Parent=GCA008085315_01738_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4591,COG:M,RefSeq:WP_019518223.1,SO:0001217,UniParc:UPI0002F730DD,UniRef:UniRef100_UPI0002F730DD,UniRef:UniRef50_A0A0J3UWD0,UniRef:UniRef90_A0AAP7L4H3 contig_21 Pyrodigal gene 120462 121787 . - . ID=GCA008085315_01739_gene;locus_tag=GCA008085315_01739;gene=salY contig_21 Pyrodigal CDS 120462 121787 . - 0 ID=GCA008085315_01739;Name=Macrolide export ATP-binding/permease protein MacB;locus_tag=GCA008085315_01739;product=Macrolide export ATP-binding/permease protein MacB;gene=salY;Parent=GCA008085315_01739_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0577,COG:V,RefSeq:WP_005547153.1,SO:0001217,UniParc:UPI0001B9F6D4,UniRef:UniRef100_UPI0001B9F6D4,UniRef:UniRef50_B1VCI4,UniRef:UniRef90_A0A448F736 contig_21 Pyrodigal gene 121790 123220 . - . ID=GCA008085315_01740_gene;locus_tag=GCA008085315_01740 contig_21 Pyrodigal CDS 121790 123220 . - 0 ID=GCA008085315_01740;Name=DUF2318 domain-containing protein;locus_tag=GCA008085315_01740;product=DUF2318 domain-containing protein;Parent=GCA008085315_01740_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4393,COG:S,RefSeq:WP_005566576.1,SO:0001217,UniParc:UPI0001B9F6D3,UniRef:UniRef100_UPI0001B9F6D3,UniRef:UniRef50_Q9CNI0,UniRef:UniRef90_A0A5D0EL50 contig_21 Pyrodigal gene 123359 123880 . - . ID=GCA008085315_01741_gene;locus_tag=GCA008085315_01741;gene=tpd contig_21 Pyrodigal CDS 123359 123880 . - 0 ID=GCA008085315_01741;Name=Pathogen-specific membrane antigen;locus_tag=GCA008085315_01741;product=Pathogen-specific membrane antigen;gene=tpd;Parent=GCA008085315_01741_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3470,COG:MI,KEGG:K07230,RefSeq:WP_148320966.1,SO:0001217,UniParc:UPI0011D55F2E,UniRef:UniRef100_UPI0011D55F2E,UniRef:UniRef50_Q9CNH9,UniRef:UniRef90_A0A448F7G6 contig_21 Pyrodigal gene 123923 125830 . - . ID=GCA008085315_01742_gene;locus_tag=GCA008085315_01742;gene=fTR1 contig_21 Pyrodigal CDS 123923 125830 . - 0 ID=GCA008085315_01742;Name=Iron permease;locus_tag=GCA008085315_01742;product=Iron permease;gene=fTR1;Parent=GCA008085315_01742_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0672,COG:P,KEGG:K07243,RefSeq:WP_005547159.1,SO:0001217,UniParc:UPI0001B9F6D1,UniRef:UniRef100_UPI0001B9F6D1,UniRef:UniRef50_A0A0W8JF71,UniRef:UniRef90_A0A5D0EJP4 contig_21 Pyrodigal gene 126129 128447 . - . ID=GCA008085315_01743_gene;locus_tag=GCA008085315_01743;gene=mrcB contig_21 Pyrodigal CDS 126129 128447 . - 0 ID=GCA008085315_01743;Name=penicillin-binding protein 1B;locus_tag=GCA008085315_01743;product=penicillin-binding protein 1B;Dbxref=GO:0008233,GO:0008658,GO:0008955,GO:0009252,GO:0009274,GO:0046677;gene=mrcB;Parent=GCA008085315_01743_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0744,COG:M,KEGG:K05365,SO:0001217,UniRef:UniRef50_P45345,UniRef:UniRef90_A0A5D0EJH3;ec_number=3.4.16.4 contig_21 Pyrodigal gene 128785 129126 . - . ID=GCA008085315_01744_gene;locus_tag=GCA008085315_01744;gene=erpA contig_21 Pyrodigal CDS 128785 129126 . - 0 ID=GCA008085315_01744;Name=iron-sulfur cluster insertion protein ErpA;locus_tag=GCA008085315_01744;product=iron-sulfur cluster insertion protein ErpA;Dbxref=GO:0005506,GO:0005829,GO:0016226,GO:0051536,GO:0051537,GO:0051539,GO:0106035;gene=erpA;Parent=GCA008085315_01744_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0316,COG:O,RefSeq:WP_005538694.1,SO:0001217,UniParc:UPI0001B9F655,UniRef:UniRef100_A0A142FY05,UniRef:UniRef50_A6VN49,UniRef:UniRef90_A6VN49 contig_21 Pyrodigal gene 129260 130060 . + . ID=GCA008085315_01745_gene;locus_tag=GCA008085315_01745;gene=map contig_21 Pyrodigal CDS 129260 130060 . + 0 ID=GCA008085315_01745;Name=type I methionyl aminopeptidase;locus_tag=GCA008085315_01745;product=type I methionyl aminopeptidase;Dbxref=GO:0006508,GO:0070006;gene=map;Parent=GCA008085315_01745_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0024,COG:J,KEGG:K01265,SO:0001217,UniRef:UniRef50_E6KY72,UniRef:UniRef90_E6KY72;ec_number=3.4.11.18 contig_21 Pyrodigal gene 130126 132717 . + . ID=GCA008085315_01746_gene;locus_tag=GCA008085315_01746;gene=glnD contig_21 Pyrodigal CDS 130126 132717 . + 0 ID=GCA008085315_01746;Name=bifunctional uridylyltransferase/uridylyl-removing protein GlnD;locus_tag=GCA008085315_01746;product=bifunctional uridylyltransferase/uridylyl-removing protein GlnD;gene=glnD;Parent=GCA008085315_01746_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2844,COG:OT,RefSeq:WP_148320963.1,SO:0001217,UniParc:UPI0011D7F888,UniRef:UniRef100_UPI0011D7F888,UniRef:UniRef50_Q65SZ8,UniRef:UniRef90_G4AAP4 contig_21 Pyrodigal gene 132793 134076 . - . ID=GCA008085315_01747_gene;locus_tag=GCA008085315_01747;gene=hemL contig_21 Pyrodigal CDS 132793 134076 . - 0 ID=GCA008085315_01747;Name=glutamate-1-semialdehyde 2%2C1-aminomutase;locus_tag=GCA008085315_01747;product=glutamate-1-semialdehyde 2%2C1-aminomutase;Dbxref=GO:0033014,GO:0042286;gene=hemL;Parent=GCA008085315_01747_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0001,COG:H,RefSeq:WP_005547170.1,SO:0001217,UniParc:UPI0001B9F652,UniRef:UniRef100_UPI0001B9F652,UniRef:UniRef50_P48247,UniRef:UniRef90_E6KY70;ec_number=5.4.3.8 contig_21 Pyrodigal gene 134205 135278 . + . ID=GCA008085315_01748_gene;locus_tag=GCA008085315_01748;gene=wecA contig_21 Pyrodigal CDS 134205 135278 . + 0 ID=GCA008085315_01748;Name=UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase;locus_tag=GCA008085315_01748;product=UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase;Dbxref=GO:0000287,GO:0009103,GO:0009246,GO:0009276,GO:0016020,GO:0016780,GO:0030145,GO:0036380;gene=wecA;Parent=GCA008085315_01748_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0472,COG:M,KEGG:K02851,RefSeq:WP_005547173.1,SO:0001217,UniParc:UPI0001B9F651,UniRef:UniRef100_UPI0001B9F651,UniRef:UniRef50_P45341,UniRef:UniRef90_A0A5D0EK29;ec_number=2.7.8.35 contig_21 tRNAscan-SE gene 135445 135521 . + . ID=GCA008085315_01749_gene;locus_tag=GCA008085315_01749;gene=trnR contig_21 tRNAscan-SE tRNA 135445 135521 . + . ID=GCA008085315_01749;Name=tRNA-Arg(ccg);locus_tag=GCA008085315_01749;product=tRNA-Arg(ccg);gene=trnR;anti_codon=ccg;amino_acid=Arg;Parent=GCA008085315_01749_gene;inference=profile:tRNAscan:2.0;Note=SO:0001036 contig_21 tRNAscan-SE gene 135553 135628 . + . ID=GCA008085315_01750_gene;locus_tag=GCA008085315_01750;gene=trnH contig_21 tRNAscan-SE tRNA 135553 135628 . + . ID=GCA008085315_01750;Name=tRNA-His(gtg);locus_tag=GCA008085315_01750;product=tRNA-His(gtg);gene=trnH;anti_codon=gtg;amino_acid=His;Parent=GCA008085315_01750_gene;inference=profile:tRNAscan:2.0;Note=SO:0000262 contig_21 tRNAscan-SE gene 135631 135707 . + . ID=GCA008085315_01751_gene;locus_tag=GCA008085315_01751;gene=trnP contig_21 tRNAscan-SE tRNA 135631 135707 . + . ID=GCA008085315_01751;Name=tRNA-Pro(tgg);locus_tag=GCA008085315_01751;product=tRNA-Pro(tgg);gene=trnP;anti_codon=tgg;amino_acid=Pro;Parent=GCA008085315_01751_gene;inference=profile:tRNAscan:2.0;Note=SO:0000268 ##sequence-region contig_22 1 115152 contig_22 Bakta region 1 115152 . + . ID=contig_22;Name=contig_22 contig_22 Pyrodigal gene 142 1674 . - . ID=GCA008085315_01752_gene;locus_tag=GCA008085315_01752;gene=nhaC contig_22 Pyrodigal CDS 142 1674 . - 0 ID=GCA008085315_01752;Name=Na+/H+ antiporter;locus_tag=GCA008085315_01752;product=Na+/H+ antiporter;gene=nhaC;Parent=GCA008085315_01752_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1757,KEGG:K18218,RefSeq:WP_005548703.1,SO:0001217,UniParc:UPI00022BFF79,UniRef:UniRef100_UPI00022BFF79,UniRef:UniRef50_P44263,UniRef:UniRef90_A0A5D0EK30 contig_22 Infernal regulatory_region 1768 1942 2.1e-20 - . ID=FFLMJBKAJI_104;Name=Lysine riboswitch aptamer;product=Lysine riboswitch aptamer;Dbxref=RFAM:RF00168;inference=profile:Rfam:RF00168;Note=SO:0000035;regulatory_class=riboswitch contig_22 Pyrodigal gene 2115 2513 . + . ID=GCA008085315_01753_gene;locus_tag=GCA008085315_01753;gene=hns contig_22 Pyrodigal CDS 2115 2513 . + 0 ID=GCA008085315_01753;Name=DNA-binding protein;locus_tag=GCA008085315_01753;product=DNA-binding protein;gene=hns;Parent=GCA008085315_01753_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:B,COG:COG2916,RefSeq:WP_005543107.1,SO:0001217,UniParc:UPI0001B9F51C,UniRef:UniRef100_A0A142FXI8,UniRef:UniRef50_P43841,UniRef:UniRef90_A0A142FXI8 contig_22 Pyrodigal gene 2565 3434 . + . ID=GCA008085315_01754_gene;locus_tag=GCA008085315_01754;gene=purU contig_22 Pyrodigal CDS 2565 3434 . + 0 ID=GCA008085315_01754;Name=formyltetrahydrofolate deformylase;locus_tag=GCA008085315_01754;product=formyltetrahydrofolate deformylase;Dbxref=GO:0006189,GO:0008864;gene=purU;Parent=GCA008085315_01754_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A126VJV7,UniRef:UniRef90_G4A830;ec_number=3.5.1.10 contig_22 Pyrodigal gene 3569 4198 . + . ID=GCA008085315_01755_gene;locus_tag=GCA008085315_01755;gene=rlmE contig_22 Pyrodigal CDS 3569 4198 . + 0 ID=GCA008085315_01755;Name=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;locus_tag=GCA008085315_01755;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;Dbxref=GO:0001510,GO:0005737,GO:0006364,GO:0008650,GO:0016436;gene=rlmE;Parent=GCA008085315_01755_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0293,COG:J,RefSeq:WP_005568080.1,SO:0001217,UniParc:UPI00022AC854,UniRef:UniRef100_UPI00022AC854,UniRef:UniRef50_P45162,UniRef:UniRef90_P45162;ec_number=2.1.1.166 contig_22 Pyrodigal gene 4314 6143 . + . ID=GCA008085315_01756_gene;locus_tag=GCA008085315_01756;gene=ftsH contig_22 Pyrodigal CDS 4314 6143 . + 0 ID=GCA008085315_01756;Name=ATP-dependent zinc metalloprotease FtsH;locus_tag=GCA008085315_01756;product=ATP-dependent zinc metalloprotease FtsH;Dbxref=GO:0004176,GO:0004222,GO:0006508;gene=ftsH;Parent=GCA008085315_01756_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0465,COG:O,SO:0001217,UniRef:UniRef50_Q1D491,UniRef:UniRef90_A0AAP7GXB3;ec_number=3.4.24.- contig_22 Pyrodigal gene 6355 6891 . + . ID=GCA008085315_01757_gene;locus_tag=GCA008085315_01757 contig_22 Pyrodigal CDS 6355 6891 . + 0 ID=GCA008085315_01757;Name=Elongation factor P hydroxylase;locus_tag=GCA008085315_01757;product=Elongation factor P hydroxylase;Parent=GCA008085315_01757_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K09906,RefSeq:WP_005568082.1,SO:0001217,UniParc:UPI00022AC627,UniRef:UniRef100_UPI00022AC627,UniRef:UniRef50_P44255,UniRef:UniRef90_U1QMY9;ec_number=1.14.-.- contig_22 Pyrodigal gene 7019 7384 . - . ID=GCA008085315_01758_gene;locus_tag=GCA008085315_01758 contig_22 Pyrodigal CDS 7019 7384 . - 0 ID=GCA008085315_01758;Name=TOBE domain-containing protein;locus_tag=GCA008085315_01758;product=TOBE domain-containing protein;Parent=GCA008085315_01758_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_UPI003561D7BE,UniRef:UniRef90_UPI003561D7BE contig_22 Pyrodigal gene 7402 7494 . - . ID=GCA008085315_01759_gene;locus_tag=GCA008085315_01759 contig_22 Pyrodigal CDS 7402 7494 . - 0 ID=GCA008085315_01759;Name=hypothetical protein;locus_tag=GCA008085315_01759;product=hypothetical protein;Parent=GCA008085315_01759_gene;inference=ab initio prediction:Pyrodigal:3.5 contig_22 Pyrodigal gene 7868 9118 . + . ID=GCA008085315_01760_gene;locus_tag=GCA008085315_01760;gene=afuA contig_22 Pyrodigal CDS 7868 9118 . + 0 ID=GCA008085315_01760;Name=Phosphoglycerate transport regulatory protein;locus_tag=GCA008085315_01760;product=Phosphoglycerate transport regulatory protein;gene=afuA;Parent=GCA008085315_01760_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1840,COG:GH,RefSeq:WP_005548722.1,SO:0001217,UniParc:UPI0001B9F514,UniRef:UniRef100_UPI0001B9F514,UniRef:UniRef50_A6VQ24,UniRef:UniRef90_G4A822 contig_22 Pyrodigal gene 9115 11097 . + . ID=GCA008085315_01761_gene;locus_tag=GCA008085315_01761 contig_22 Pyrodigal CDS 9115 11097 . + 0 ID=GCA008085315_01761;Name=histidine kinase;locus_tag=GCA008085315_01761;product=histidine kinase;Parent=GCA008085315_01761_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4192,COG:T,KEGG:K08475,RefSeq:WP_148321425.1,SO:0001217,UniParc:UPI0011D7B97A,UniRef:UniRef100_UPI0011D7B97A,UniRef:UniRef50_A6VQ25,UniRef:UniRef90_G4A821;ec_number=2.7.13.3 contig_22 Pyrodigal gene 11090 12340 . + . ID=GCA008085315_01762_gene;locus_tag=GCA008085315_01762 contig_22 Pyrodigal CDS 11090 12340 . + 0 ID=GCA008085315_01762;Name=Fis family transcriptional regulator;locus_tag=GCA008085315_01762;product=Fis family transcriptional regulator;Parent=GCA008085315_01762_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K08476,RefSeq:WP_148321012.1,SO:0001217,UniParc:UPI0011D6C8BC,UniRef:UniRef100_UPI0011D6C8BC,UniRef:UniRef50_Q9CKZ0,UniRef:UniRef90_A0A5D0EIW4 contig_22 Pyrodigal gene 12388 13251 . - . ID=GCA008085315_01763_gene;locus_tag=GCA008085315_01763;gene=queF contig_22 Pyrodigal CDS 12388 13251 . - 0 ID=GCA008085315_01763;Name=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;locus_tag=GCA008085315_01763;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;Dbxref=GO:0008616,GO:0033739,GO:0043867;gene=queF;Parent=GCA008085315_01763_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K06879,SO:0001217,UniRef:UniRef50_Q46920,UniRef:UniRef90_UPI00197BA177;ec_number=1.7.1.13 contig_22 Pyrodigal gene 13236 14018 . - . ID=GCA008085315_01764_gene;locus_tag=GCA008085315_01764 contig_22 Pyrodigal CDS 13236 14018 . - 0 ID=GCA008085315_01764;Name=Zn-ribbon-containing protein;locus_tag=GCA008085315_01764;product=Zn-ribbon-containing protein;Parent=GCA008085315_01764_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5595,COG:R,RefSeq:WP_032998404.1,SO:0001217,UniParc:UPI0002FC446C,UniRef:UniRef100_UPI0002FC446C,UniRef:UniRef50_P44154,UniRef:UniRef90_A0A5D0EHZ7 contig_22 Pyrodigal gene 14125 14439 . + . ID=GCA008085315_01765_gene;locus_tag=GCA008085315_01765;gene=yqcC contig_22 Pyrodigal CDS 14125 14439 . + 0 ID=GCA008085315_01765;Name=tRNA pseudouridine synthase C;locus_tag=GCA008085315_01765;product=tRNA pseudouridine synthase C;gene=yqcC;Parent=GCA008085315_01765_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3098,COG:S,RefSeq:WP_005548733.1,SO:0001217,UniParc:UPI0001B9F50F,UniRef:UniRef100_UPI0001B9F50F,UniRef:UniRef50_Q57152,UniRef:UniRef90_E6KXX3 contig_22 Pyrodigal gene 14436 15149 . + . ID=GCA008085315_01766_gene;locus_tag=GCA008085315_01766;gene=truC contig_22 Pyrodigal CDS 14436 15149 . + 0 ID=GCA008085315_01766;Name=tRNA pseudouridine(65) synthase TruC;locus_tag=GCA008085315_01766;product=tRNA pseudouridine(65) synthase TruC;Dbxref=GO:0001522,GO:0009982;gene=truC;Parent=GCA008085315_01766_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0564,COG:J,KEGG:K06175,RefSeq:WP_005548735.1,SO:0001217,UniParc:UPI0001B9F50E,UniRef:UniRef100_UPI0001B9F50E,UniRef:UniRef50_P0AA41,UniRef:UniRef90_A0A5D0EIN3;ec_number=5.4.99.26 contig_22 Pyrodigal gene 15203 15367 . + . ID=GCA008085315_01767_gene;locus_tag=GCA008085315_01767;gene=yoaH contig_22 Pyrodigal CDS 15203 15367 . + 0 ID=GCA008085315_01767;Name=YoaH family protein;locus_tag=GCA008085315_01767;product=YoaH family protein;gene=yoaH;Parent=GCA008085315_01767_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3140,COG:S,KEGG:K09917,RefSeq:WP_005548737.1,SO:0001217,UniParc:UPI0001B9F50D,UniRef:UniRef100_UPI0001B9F50D,UniRef:UniRef50_P56507,UniRef:UniRef90_A0A142FXH4 contig_22 Pyrodigal gene 15558 15767 . + . ID=GCA008085315_01768_gene;locus_tag=GCA008085315_01768;gene=cspD contig_22 Pyrodigal CDS 15558 15767 . + 0 ID=GCA008085315_01768;Name=cold shock domain-containing protein CspD;locus_tag=GCA008085315_01768;product=cold shock domain-containing protein CspD;Dbxref=GO:0003676,GO:0005737,GO:0006355;gene=cspD;Parent=GCA008085315_01768_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1278,COG:K,KEGG:K03704,RefSeq:WP_005551608.1,SO:0001217,UniParc:UPI0001B9F50C,UniRef:UniRef100_A0A142FXH3,UniRef:UniRef50_A0A249A1H3,UniRef:UniRef90_A0A142FXH3 contig_22 Pyrodigal gene 15833 16279 . - . ID=GCA008085315_01769_gene;locus_tag=GCA008085315_01769;gene=matP contig_22 Pyrodigal CDS 15833 16279 . - 0 ID=GCA008085315_01769;Name=macrodomain Ter protein MatP;locus_tag=GCA008085315_01769;product=macrodomain Ter protein MatP;Dbxref=GO:0006355,GO:0043565;gene=matP;Parent=GCA008085315_01769_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3120,COG:L,KEGG:K09911,RefSeq:WP_005548741.1,SO:0001217,UniParc:UPI0001B9F50B,UniRef:UniRef100_UPI0001B9F50B,UniRef:UniRef50_P44161,UniRef:UniRef90_A0A142FXH2 contig_22 Pyrodigal gene 16426 18210 . + . ID=GCA008085315_01770_gene;locus_tag=GCA008085315_01770;gene=lonB contig_22 Pyrodigal CDS 16426 18210 . + 0 ID=GCA008085315_01770;Name=endopeptidase La;locus_tag=GCA008085315_01770;product=endopeptidase La;gene=lonB;Parent=GCA008085315_01770_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1067,COG:O,KEGG:K04770,RefSeq:WP_005548743.1,SO:0001217,UniParc:UPI0001B9F50A,UniRef:UniRef100_UPI0001B9F50A,UniRef:UniRef50_P43865,UniRef:UniRef90_A0A5D0EM73;ec_number=3.4.21.- contig_22 Pyrodigal gene 18353 18883 . + . ID=GCA008085315_01771_gene;locus_tag=GCA008085315_01771;gene=fabA contig_22 Pyrodigal CDS 18353 18883 . + 0 ID=GCA008085315_01771;Name=bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase;locus_tag=GCA008085315_01771;product=bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase;Dbxref=GO:0006633,GO:0019171;gene=fabA;Parent=GCA008085315_01771_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0764,COG:I,RefSeq:WP_005548745.1,SO:0001217,UniParc:UPI0001B9F509,UniRef:UniRef100_A0A142FXH0,UniRef:UniRef50_Q0I3F9,UniRef:UniRef90_A0A142FXH0;ec_number=5.3.3.14 contig_22 tRNAscan-SE gene 19067 19143 . + . ID=GCA008085315_01772_gene;locus_tag=GCA008085315_01772;gene=trnV contig_22 tRNAscan-SE tRNA 19067 19143 . + . ID=GCA008085315_01772;Name=tRNA-Val(gac);locus_tag=GCA008085315_01772;product=tRNA-Val(gac);gene=trnV;anti_codon=gac;amino_acid=Val;Parent=GCA008085315_01772_gene;inference=profile:tRNAscan:2.0;Note=SO:0000273 contig_22 Pyrodigal gene 19308 19664 . + . ID=GCA008085315_01773_gene;locus_tag=GCA008085315_01773;gene=dsrE contig_22 Pyrodigal CDS 19308 19664 . + 0 ID=GCA008085315_01773;Name=DsrE family protein;locus_tag=GCA008085315_01773;product=DsrE family protein;gene=dsrE;Parent=GCA008085315_01773_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1553,COG:J,KEGG:K06039,RefSeq:WP_005574416.1,SO:0001217,UniParc:UPI00022AE428,UniRef:UniRef100_UPI00022AE428,UniRef:UniRef50_A0A142FXG9,UniRef:UniRef90_A0A142FXG9 contig_22 Pyrodigal gene 19735 23400 . + . ID=GCA008085315_01774_gene;locus_tag=GCA008085315_01774;gene=recB contig_22 Pyrodigal CDS 19735 23400 . + 0 ID=GCA008085315_01774;Name=exodeoxyribonuclease V subunit beta;locus_tag=GCA008085315_01774;product=exodeoxyribonuclease V subunit beta;Dbxref=GO:0005524,GO:0006281,GO:0006310,GO:0008854,GO:0009338;gene=recB;Parent=GCA008085315_01774_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1074,COG:L,KEGG:K03582,RefSeq:WP_148321420.1,SO:0001217,UniParc:UPI0011D68C1D,UniRef:UniRef100_UPI0011D68C1D,UniRef:UniRef50_P45157,UniRef:UniRef90_G4A809;ec_number=3.1.11.5 contig_22 Pyrodigal gene 23400 25379 . + . ID=GCA008085315_01775_gene;locus_tag=GCA008085315_01775;gene=recD contig_22 Pyrodigal CDS 23400 25379 . + 0 ID=GCA008085315_01775;Name=exodeoxyribonuclease V subunit alpha;locus_tag=GCA008085315_01775;product=exodeoxyribonuclease V subunit alpha;Dbxref=GO:0004386,GO:0006281,GO:0006310,GO:0008854,GO:0009338;gene=recD;Parent=GCA008085315_01775_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0507,COG:L,RefSeq:WP_148321010.1,SO:0001217,UniParc:UPI0011D6F64E,UniRef:UniRef100_UPI0011D6F64E,UniRef:UniRef50_P45158,UniRef:UniRef90_G4A808;ec_number=3.1.11.5 contig_22 Pyrodigal gene 25392 25988 . + . ID=GCA008085315_01776_gene;locus_tag=GCA008085315_01776 contig_22 Pyrodigal CDS 25392 25988 . + 0 ID=GCA008085315_01776;Name=Class I SAM-dependent methyltransferase;locus_tag=GCA008085315_01776;product=Class I SAM-dependent methyltransferase;Parent=GCA008085315_01776_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005546127.1,SO:0001217,UniParc:UPI0001B9F493,UniRef:UniRef100_UPI0001B9F493,UniRef:UniRef50_G4CPR3,UniRef:UniRef90_A0A5D0KU22 contig_22 Pyrodigal gene 26232 26660 . + . ID=GCA008085315_01777_gene;locus_tag=GCA008085315_01777;gene=rplM contig_22 Pyrodigal CDS 26232 26660 . + 0 ID=GCA008085315_01777;Name=50S ribosomal protein L13;locus_tag=GCA008085315_01777;product=50S ribosomal protein L13;Dbxref=GO:0003729,GO:0003735,GO:0005840,GO:0006412,GO:0017148,GO:0022625;gene=rplM;Parent=GCA008085315_01777_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0102,COG:J,RefSeq:WP_005546126.1,SO:0001217,UniParc:UPI0001B9F492,UniRef:UniRef100_G4A806,UniRef:UniRef50_Q9HVY2,UniRef:UniRef90_Q4QKH0 contig_22 Pyrodigal gene 26677 27069 . + . ID=GCA008085315_01778_gene;locus_tag=GCA008085315_01778;gene=rpsI contig_22 Pyrodigal CDS 26677 27069 . + 0 ID=GCA008085315_01778;Name=30S ribosomal protein S9;locus_tag=GCA008085315_01778;product=30S ribosomal protein S9;Dbxref=GO:0003723,GO:0003735,GO:0005840,GO:0006412,GO:0022627;gene=rpsI;Parent=GCA008085315_01778_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0103,COG:J,KEGG:K02996,RefSeq:WP_005546123.1,SO:0001217,UniParc:UPI0001B9F491,UniRef:UniRef100_UPI0001B9F491,UniRef:UniRef50_P31782,UniRef:UniRef90_P31782 contig_22 Pyrodigal gene 27232 28017 . + . ID=GCA008085315_01779_gene;locus_tag=GCA008085315_01779;gene=truA contig_22 Pyrodigal CDS 27232 28017 . + 0 ID=GCA008085315_01779;Name=tRNA pseudouridine(38-40) synthase TruA;locus_tag=GCA008085315_01779;product=tRNA pseudouridine(38-40) synthase TruA;Dbxref=GO:0001522,GO:0003723,GO:0009451,GO:0009982;gene=truA;Parent=GCA008085315_01779_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0101,COG:J,KEGG:K06173,RefSeq:WP_005574423.1,SO:0001217,UniParc:UPI0001B9F48F,UniRef:UniRef100_UPI0001B9F48F,UniRef:UniRef50_Q9KTA4,UniRef:UniRef90_E6KXV8;ec_number=5.4.99.12 contig_22 Pyrodigal gene 28030 28314 . - . ID=GCA008085315_01780_gene;locus_tag=GCA008085315_01780 contig_22 Pyrodigal CDS 28030 28314 . - 0 ID=GCA008085315_01780;Name=type II toxin-antitoxin system RelE/ParE family toxin;locus_tag=GCA008085315_01780;product=type II toxin-antitoxin system RelE/ParE family toxin;Parent=GCA008085315_01780_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_019518289.1,SO:0001217,UniParc:UPI00036406B7,UniRef:UniRef100_UPI00036406B7,UniRef:UniRef50_A0A5E7K973,UniRef:UniRef90_UPI0001B9F48E contig_22 Pyrodigal gene 28311 28565 . - . ID=GCA008085315_01781_gene;locus_tag=GCA008085315_01781;gene=stbD contig_22 Pyrodigal CDS 28311 28565 . - 0 ID=GCA008085315_01781;Name=Plasmid stabilization protein;locus_tag=GCA008085315_01781;product=Plasmid stabilization protein;gene=stbD;Parent=GCA008085315_01781_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2161,COG:V,KEGG:K19159,RefSeq:WP_005574425.1,SO:0001217,UniParc:UPI0001B9F48D,UniRef:UniRef100_UPI0001B9F48D,UniRef:UniRef50_A0A159Z7M2,UniRef:UniRef90_A0A5D0EKL6 contig_22 Pyrodigal gene 28782 29579 . - . ID=GCA008085315_01782_gene;locus_tag=GCA008085315_01782 contig_22 Pyrodigal CDS 28782 29579 . - 0 ID=GCA008085315_01782;Name=DASS family sodium-coupled anion symporter;locus_tag=GCA008085315_01782;product=DASS family sodium-coupled anion symporter;Parent=GCA008085315_01782_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_UPI0001E499D8 contig_22 Pyrodigal gene 30333 30842 . - . ID=GCA008085315_01783_gene;locus_tag=GCA008085315_01783 contig_22 Pyrodigal CDS 30333 30842 . - 0 ID=GCA008085315_01783;Name=helix-turn-helix domain-containing protein;locus_tag=GCA008085315_01783;product=helix-turn-helix domain-containing protein;Parent=GCA008085315_01783_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_025298321.1,SO:0001217,UniParc:UPI00046CA8E0,UniRef:UniRef100_UPI00046CA8E0,UniRef:UniRef50_A0AAQ2BK84,UniRef:UniRef90_UPI0011D6D596 contig_22 Pyrodigal gene 30977 31165 . + . ID=GCA008085315_01784_gene;locus_tag=GCA008085315_01784 contig_22 Pyrodigal CDS 30977 31165 . + 0 ID=GCA008085315_01784;Name=DNA-binding protein;locus_tag=GCA008085315_01784;product=DNA-binding protein;Parent=GCA008085315_01784_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_025298322.1,SO:0001217,UniParc:UPI00046D606C,UniRef:UniRef100_UPI00046D606C,UniRef:UniRef50_A0AAQ2BLE9,UniRef:UniRef90_UPI00077E4AB8 contig_22 Pyrodigal gene 31174 32001 . + . ID=GCA008085315_01785_gene;locus_tag=GCA008085315_01785 contig_22 Pyrodigal CDS 31174 32001 . + 0 ID=GCA008085315_01785;Name=DNA-binding domain-containing protein;locus_tag=GCA008085315_01785;product=DNA-binding domain-containing protein;Parent=GCA008085315_01785_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148321008.1,SO:0001217,UniParc:UPI0011D4FEDE,UniRef:UniRef100_UPI0011D4FEDE,UniRef:UniRef50_UPI001E295B7A,UniRef:UniRef90_UPI0011D4FEDE contig_22 Pyrodigal gene 31903 32583 . - . ID=GCA008085315_01786_gene;locus_tag=GCA008085315_01786 contig_22 Pyrodigal CDS 31903 32583 . - 0 ID=GCA008085315_01786;Name=hypothetical protein;locus_tag=GCA008085315_01786;product=hypothetical protein;Parent=GCA008085315_01786_gene;inference=ab initio prediction:Pyrodigal:3.5 contig_22 Pyrodigal gene 32889 34346 . + . ID=GCA008085315_01787_gene;locus_tag=GCA008085315_01787;gene=pspE contig_22 Pyrodigal CDS 32889 34346 . + 0 ID=GCA008085315_01787;Name=tRNA sulfurtransferase;locus_tag=GCA008085315_01787;product=tRNA sulfurtransferase;gene=pspE;Parent=GCA008085315_01787_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0607,COG:P,KEGG:K03151,RefSeq:WP_005546106.1,SO:0001217,UniParc:UPI0001B9F487,UniRef:UniRef100_UPI0001B9F487,UniRef:UniRef50_P77718,UniRef:UniRef90_A0A142FXF7;ec_number=2.8.1.4 contig_22 Pyrodigal gene 34430 35134 . - . ID=GCA008085315_01788_gene;locus_tag=GCA008085315_01788;gene=pepE contig_22 Pyrodigal CDS 34430 35134 . - 0 ID=GCA008085315_01788;Name=dipeptidase PepE;locus_tag=GCA008085315_01788;product=dipeptidase PepE;Dbxref=GO:0006508,GO:0008236;gene=pepE;Parent=GCA008085315_01788_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3340,COG:E,RefSeq:WP_005542137.1,SO:0001217,UniParc:UPI0001B9F486,UniRef:UniRef100_A0A5D0KU32,UniRef:UniRef50_P44766,UniRef:UniRef90_E6KXV3;ec_number=3.4.13.21 contig_22 Pyrodigal gene 35317 36309 . + . ID=GCA008085315_01789_gene;locus_tag=GCA008085315_01789 contig_22 Pyrodigal CDS 35317 36309 . + 0 ID=GCA008085315_01789;Name=Death-on-curing protein;locus_tag=GCA008085315_01789;product=Death-on-curing protein;Parent=GCA008085315_01789_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07341,RefSeq:WP_005546104.1,SO:0001217,UniParc:UPI0001B9F485,UniRef:UniRef100_UPI0001B9F485,UniRef:UniRef50_C8N9I7,UniRef:UniRef90_G4A7Z4 contig_22 Pyrodigal gene 36374 37342 . - . ID=GCA008085315_01790_gene;locus_tag=GCA008085315_01790;gene=cofD contig_22 Pyrodigal CDS 36374 37342 . - 0 ID=GCA008085315_01790;Name=Putative gluconeogenesis factor;locus_tag=GCA008085315_01790;product=Putative gluconeogenesis factor;gene=cofD;Parent=GCA008085315_01790_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0391,COG:GH,RefSeq:WP_005568127.1,SO:0001217,UniParc:UPI0001B9F484,UniRef:UniRef100_UPI0001B9F484,UniRef:UniRef50_P75767,UniRef:UniRef90_G4A7Z3 contig_22 Infernal regulatory_region 37563 37711 7.8e-13 + . ID=FFLMJBKAJI_105;Name=Molybdenum/Tungsten riboswitch aptamer (Moco RNA motif);product=Molybdenum/Tungsten riboswitch aptamer (Moco RNA motif);Dbxref=RFAM:RF01055;inference=profile:Rfam:RF01055;Note=SO:0000035;regulatory_class=riboswitch contig_22 Pyrodigal gene 37700 38713 . + . ID=GCA008085315_01791_gene;locus_tag=GCA008085315_01791;gene=moaA contig_22 Pyrodigal CDS 37700 38713 . + 0 ID=GCA008085315_01791;Name=GTP 3'%2C8-cyclase MoaA;locus_tag=GCA008085315_01791;product=GTP 3'%2C8-cyclase MoaA;Dbxref=GO:0006777,GO:0046872,GO:0051539;gene=moaA;Parent=GCA008085315_01791_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2896,COG:H,RefSeq:WP_005546100.1,SO:0001217,UniParc:UPI0001B9F483,UniRef:UniRef100_UPI0001B9F483,UniRef:UniRef50_A3N054,UniRef:UniRef90_A0A142G324;ec_number=4.1.99.22 contig_22 Pyrodigal gene 38807 39247 . + . ID=GCA008085315_01792_gene;locus_tag=GCA008085315_01792;gene=moaC contig_22 Pyrodigal CDS 38807 39247 . + 0 ID=GCA008085315_01792;Name=cyclic pyranopterin monophosphate synthase MoaC;locus_tag=GCA008085315_01792;product=cyclic pyranopterin monophosphate synthase MoaC;Dbxref=GO:0006777,GO:0061799;gene=moaC;Parent=GCA008085315_01792_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0315,COG:H,KEGG:K03637,SO:0001217,UniRef:UniRef50_Q5E6B0,UniRef:UniRef90_A0A142G325;ec_number=4.6.1.17 contig_22 Pyrodigal gene 39247 39495 . + . ID=GCA008085315_01793_gene;locus_tag=GCA008085315_01793;gene=moaD contig_22 Pyrodigal CDS 39247 39495 . + 0 ID=GCA008085315_01793;Name=molybdopterin synthase sulfur carrier subunit;locus_tag=GCA008085315_01793;product=molybdopterin synthase sulfur carrier subunit;Dbxref=GO:0006777;gene=moaD;Parent=GCA008085315_01793_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1977,COG:H,RefSeq:WP_005546096.1,SO:0001217,UniParc:UPI0001B9F481,UniRef:UniRef100_UPI0001B9F481,UniRef:UniRef50_P45309,UniRef:UniRef90_A0A142G326;ec_number=2.8.1.12 contig_22 Pyrodigal gene 39496 39951 . + . ID=GCA008085315_01794_gene;locus_tag=GCA008085315_01794;gene=moaE contig_22 Pyrodigal CDS 39496 39951 . + 0 ID=GCA008085315_01794;Name=molybdopterin synthase catalytic subunit MoaE;locus_tag=GCA008085315_01794;product=molybdopterin synthase catalytic subunit MoaE;Dbxref=GO:0006777;gene=moaE;Parent=GCA008085315_01794_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0314,COG:H,KEGG:K03635,RefSeq:WP_005546093.1,SO:0001217,UniParc:UPI0001B9F480,UniRef:UniRef100_UPI0001B9F480,UniRef:UniRef50_A0A7C5SG17,UniRef:UniRef90_A0A142G327;ec_number=2.8.1.12 contig_22 Pyrodigal gene 40151 40792 . + . ID=GCA008085315_01795_gene;locus_tag=GCA008085315_01795;gene=sspA contig_22 Pyrodigal CDS 40151 40792 . + 0 ID=GCA008085315_01795;Name=stringent starvation protein SspA;locus_tag=GCA008085315_01795;product=stringent starvation protein SspA;Dbxref=GO:0005515,GO:0006749;gene=sspA;Parent=GCA008085315_01795_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0625,COG:O,RefSeq:WP_005546091.1,SO:0001217,UniParc:UPI0001B9F47F,UniRef:UniRef100_UPI0001B9F47F,UniRef:UniRef50_P45207,UniRef:UniRef90_A0A142G328 contig_22 Pyrodigal gene 40804 41265 . + . ID=GCA008085315_01796_gene;locus_tag=GCA008085315_01796;gene=sspB contig_22 Pyrodigal CDS 40804 41265 . + 0 ID=GCA008085315_01796;Name=ClpXP protease specificity-enhancing factor;locus_tag=GCA008085315_01796;product=ClpXP protease specificity-enhancing factor;gene=sspB;Parent=GCA008085315_01796_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2969,COG:O,RefSeq:WP_005546088.1,SO:0001217,UniParc:UPI0001B9F47E,UniRef:UniRef100_UPI0001B9F47E,UniRef:UniRef50_P45206,UniRef:UniRef90_A0A5D0ELR1 contig_22 Pyrodigal gene 41428 42831 . - . ID=GCA008085315_01797_gene;locus_tag=GCA008085315_01797;gene=asnS contig_22 Pyrodigal CDS 41428 42831 . - 0 ID=GCA008085315_01797;Name=asparagine--tRNA ligase;locus_tag=GCA008085315_01797;product=asparagine--tRNA ligase;Dbxref=GO:0000166,GO:0003676,GO:0004816,GO:0005524,GO:0005737,GO:0006421;gene=asnS;Parent=GCA008085315_01797_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0017,COG:J,KEGG:K01893,RefSeq:WP_005546085.1,SO:0001217,UniParc:UPI0001B9F47D,UniRef:UniRef100_UPI0001B9F47D,UniRef:UniRef50_P43829,UniRef:UniRef90_P43829;ec_number=6.1.1.22 contig_22 Pyrodigal gene 43027 44256 . + . ID=GCA008085315_01798_gene;locus_tag=GCA008085315_01798;gene=nagC contig_22 Pyrodigal CDS 43027 44256 . + 0 ID=GCA008085315_01798;Name=NagC family transcriptional regulator;locus_tag=GCA008085315_01798;product=NagC family transcriptional regulator;gene=nagC;Parent=GCA008085315_01798_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1940,COG:GK,RefSeq:WP_148321006.1,SO:0001217,UniParc:UPI0011DC1962,UniRef:UniRef100_UPI0011DC1962,UniRef:UniRef50_C9PQW4,UniRef:UniRef90_A0A142G331 contig_22 Pyrodigal gene 44333 45061 . + . ID=GCA008085315_01799_gene;locus_tag=GCA008085315_01799;gene=bioD contig_22 Pyrodigal CDS 44333 45061 . + 0 ID=GCA008085315_01799;Name=dethiobiotin synthase;locus_tag=GCA008085315_01799;product=dethiobiotin synthase;Dbxref=GO:0000287,GO:0004141,GO:0005524,GO:0009102;gene=bioD;Parent=GCA008085315_01799_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0132,COG:H,KEGG:K01935,RefSeq:WP_005546082.1,SO:0001217,UniParc:UPI0001B9F47B,UniRef:UniRef100_UPI0001B9F47B,UniRef:UniRef50_Q9CN08,UniRef:UniRef90_A0A5D0EKR3;ec_number=6.3.3.3 contig_22 Pyrodigal gene 45150 46724 . - . ID=GCA008085315_01800_gene;locus_tag=GCA008085315_01800;gene=lsrK contig_22 Pyrodigal CDS 45150 46724 . - 0 ID=GCA008085315_01800;Name=autoinducer-2 kinase;locus_tag=GCA008085315_01800;product=autoinducer-2 kinase;Dbxref=GO:0005975,GO:0009372,GO:0071518;gene=lsrK;Parent=GCA008085315_01800_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1070,COG:G,KEGG:K11216,RefSeq:WP_005546079.1,SO:0001217,UniParc:UPI0001B9F47A,UniRef:UniRef100_UPI0001B9F47A,UniRef:UniRef50_Q9CLG3,UniRef:UniRef90_A0A142G333;ec_number=2.7.1.189 contig_22 Pyrodigal gene 46773 47738 . - . ID=GCA008085315_01801_gene;locus_tag=GCA008085315_01801;gene=lsrR contig_22 Pyrodigal CDS 46773 47738 . - 0 ID=GCA008085315_01801;Name=transcriptional regulator LsrR;locus_tag=GCA008085315_01801;product=transcriptional regulator LsrR;gene=lsrR;Parent=GCA008085315_01801_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2390,COG:K,KEGG:K11531,RefSeq:WP_005537607.1,SO:0001217,UniParc:UPI0001B9F479,UniRef:UniRef100_A0A142G334,UniRef:UniRef50_P76141,UniRef:UniRef90_A0A142G334 contig_22 Pyrodigal gene 47982 49499 . + . ID=GCA008085315_01802_gene;locus_tag=GCA008085315_01802;gene=lsrA contig_22 Pyrodigal CDS 47982 49499 . + 0 ID=GCA008085315_01802;Name=autoinducer 2 ABC transporter ATP-binding protein LsrA;locus_tag=GCA008085315_01802;product=autoinducer 2 ABC transporter ATP-binding protein LsrA;Dbxref=GO:0005524,GO:0016020,GO:0042626,GO:1905887;gene=lsrA;Parent=GCA008085315_01802_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K10558,RefSeq:WP_005546077.1,SO:0001217,UniParc:UPI0001B9F478,UniRef:UniRef100_UPI0001B9F478,UniRef:UniRef50_P77257,UniRef:UniRef90_A0A5D0ELH6;ec_number=7.6.2.- contig_22 Pyrodigal gene 49508 50539 . + . ID=GCA008085315_01803_gene;locus_tag=GCA008085315_01803;gene=lsrC contig_22 Pyrodigal CDS 49508 50539 . + 0 ID=GCA008085315_01803;Name=autoinducer 2 ABC transporter permease LsrC;locus_tag=GCA008085315_01803;product=autoinducer 2 ABC transporter permease LsrC;Dbxref=GO:0022857,GO:0055085;gene=lsrC;Parent=GCA008085315_01803_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_P77672,UniRef:UniRef90_A0A336N912;ec_number=7.6.2.- contig_22 Pyrodigal gene 50553 51557 . + . ID=GCA008085315_01804_gene;locus_tag=GCA008085315_01804;gene=lsrD contig_22 Pyrodigal CDS 50553 51557 . + 0 ID=GCA008085315_01804;Name=autoinducer 2 ABC transporter permease LsrD;locus_tag=GCA008085315_01804;product=autoinducer 2 ABC transporter permease LsrD;gene=lsrD;Parent=GCA008085315_01804_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005567655.1,SO:0001217,UniParc:UPI00022AC2F8,UniRef:UniRef100_UPI00022AC2F8,UniRef:UniRef50_Q8ZKQ2,UniRef:UniRef90_A0A336N5F6;ec_number=7.6.2.- contig_22 Pyrodigal gene 51582 52679 . + . ID=GCA008085315_01805_gene;locus_tag=GCA008085315_01805;gene=lsrB contig_22 Pyrodigal CDS 51582 52679 . + 0 ID=GCA008085315_01805;Name=autoinducer 2 ABC transporter substrate-binding protein LsrB;locus_tag=GCA008085315_01805;product=autoinducer 2 ABC transporter substrate-binding protein LsrB;gene=lsrB;Parent=GCA008085315_01805_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1879,COG:G,RefSeq:WP_005567654.1,SO:0001217,UniParc:UPI00022AC2F7,UniRef:UniRef100_UPI00022AC2F7,UniRef:UniRef50_P76142,UniRef:UniRef90_A0A5D0EM36;ec_number=7.6.2.- contig_22 Infernal gene 51593 51690 . - . ID=GCA008085315_01806_gene;locus_tag=GCA008085315_01806;gene=AaHKsRNA22 contig_22 Infernal ncRNA 51593 51690 3.1e-12 - . ID=GCA008085315_01806;Name=Aggregatibacter sRNA 22;locus_tag=GCA008085315_01806;product=Aggregatibacter sRNA 22;Dbxref=RFAM:RF02902;Parent=GCA008085315_01806_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02902 contig_22 Pyrodigal gene 52703 53581 . + . ID=GCA008085315_01807_gene;locus_tag=GCA008085315_01807;gene=lsrF contig_22 Pyrodigal CDS 52703 53581 . + 0 ID=GCA008085315_01807;Name=3-hydroxy-5-phosphonooxypentane-2%2C4-dione thiolase;locus_tag=GCA008085315_01807;product=3-hydroxy-5-phosphonooxypentane-2%2C4-dione thiolase;Dbxref=GO:0004332,GO:0016829;gene=lsrF;Parent=GCA008085315_01807_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1830,COG:G,KEGG:K08321,RefSeq:WP_148333993.1,SO:0001217,UniParc:UPI0011D94F8D,UniRef:UniRef100_UPI0011D94F8D,UniRef:UniRef50_P76143,UniRef:UniRef90_Q9CLF7;ec_number=4.2.1.- contig_22 Pyrodigal gene 53614 53916 . + . ID=GCA008085315_01808_gene;locus_tag=GCA008085315_01808;gene=lsrG contig_22 Pyrodigal CDS 53614 53916 . + 0 ID=GCA008085315_01808;Name=(4S)-4-hydroxy-5-phosphonooxypentane-2%2C3-dione isomerase;locus_tag=GCA008085315_01808;product=(4S)-4-hydroxy-5-phosphonooxypentane-2%2C3-dione isomerase;gene=lsrG;Parent=GCA008085315_01808_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1359,RefSeq:WP_005544322.1,SO:0001217,UniParc:UPI0001B9F473,UniRef:UniRef100_A0A142G338,UniRef:UniRef50_A0A142G338,UniRef:UniRef90_A0A142G338;ec_number=5.3.1.32 contig_22 Pyrodigal gene 54020 55465 . - . ID=GCA008085315_01809_gene;locus_tag=GCA008085315_01809;gene=pyk contig_22 Pyrodigal CDS 54020 55465 . - 0 ID=GCA008085315_01809;Name=pyruvate kinase;locus_tag=GCA008085315_01809;product=pyruvate kinase;Dbxref=GO:0000287,GO:0004743,GO:0006096,GO:0030955;gene=pyk;Parent=GCA008085315_01809_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0469,COG:G,KEGG:K00873,RefSeq:WP_012821023.1,SO:0001217,UniParc:UPI0001B9F472,UniRef:UniRef100_UPI0001B9F472,UniRef:UniRef50_P21599,UniRef:UniRef90_E6KXU0;ec_number=2.7.1.40 contig_22 Pyrodigal gene 55712 56701 . - . ID=GCA008085315_01810_gene;locus_tag=GCA008085315_01810;gene=nrdB contig_22 Pyrodigal CDS 55712 56701 . - 0 ID=GCA008085315_01810;Name=ribonucleoside-diphosphate reductase;locus_tag=GCA008085315_01810;product=ribonucleoside-diphosphate reductase;gene=nrdB;Parent=GCA008085315_01810_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0208,COG:F,RefSeq:WP_005544319.1,SO:0001217,UniParc:UPI0001B9F3FD,UniRef:UniRef100_A0A142G3G1,UniRef:UniRef50_A0A142G3G1,UniRef:UniRef90_A0A142G3G1 contig_22 Pyrodigal gene 56832 58517 . - . ID=GCA008085315_01811_gene;locus_tag=GCA008085315_01811;gene=nrdA contig_22 Pyrodigal CDS 56832 58517 . - 0 ID=GCA008085315_01811;Name=ribonucleoside-diphosphate reductase subunit alpha;locus_tag=GCA008085315_01811;product=ribonucleoside-diphosphate reductase subunit alpha;Dbxref=GO:0004748;gene=nrdA;Parent=GCA008085315_01811_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0209,COG:F,RefSeq:WP_148333994.1,SO:0001217,UniParc:UPI0011DA9D75,UniRef:UniRef100_UPI0011DA9D75,UniRef:UniRef50_A0A2I7SFR9,UniRef:UniRef90_A0A336N6F8;ec_number=1.17.4.1 contig_22 Pyrodigal gene 58793 59599 . - . ID=GCA008085315_01812_gene;locus_tag=GCA008085315_01812 contig_22 Pyrodigal CDS 58793 59599 . - 0 ID=GCA008085315_01812;Name=tryptophan synthase subunit alpha;locus_tag=GCA008085315_01812;product=tryptophan synthase subunit alpha;Parent=GCA008085315_01812_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005546060.1,SO:0001217,UniParc:UPI00022AC2F1,UniRef:UniRef100_UPI00022AC2F1,UniRef:UniRef90_Q4QKF6 contig_22 Pyrodigal gene 59745 60794 . - . ID=GCA008085315_01813_gene;locus_tag=GCA008085315_01813;gene=trpB contig_22 Pyrodigal CDS 59745 60794 . - 0 ID=GCA008085315_01813;Name=tryptophan synthase subunit beta;locus_tag=GCA008085315_01813;product=tryptophan synthase subunit beta;Dbxref=GO:0000162,GO:0004834,GO:0005737,GO:0006568;gene=trpB;Parent=GCA008085315_01813_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0133,COG:E,SO:0001217,UniRef:UniRef50_P0A879,UniRef:UniRef90_A6VPD9;ec_number=4.2.1.20 contig_22 Pyrodigal gene 60804 61571 . - . ID=GCA008085315_01814_gene;locus_tag=GCA008085315_01814;gene=ydfG contig_22 Pyrodigal CDS 60804 61571 . - 0 ID=GCA008085315_01814;Name=Malonic semialdehyde reductase;locus_tag=GCA008085315_01814;product=Malonic semialdehyde reductase;gene=ydfG;Parent=GCA008085315_01814_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG4221,SO:0001217,UniRef:UniRef50_P39831,UniRef:UniRef90_A0A5D0EMI2 contig_22 Pyrodigal gene 61964 62833 . + . ID=GCA008085315_01815_gene;locus_tag=GCA008085315_01815 contig_22 Pyrodigal CDS 61964 62833 . + 0 ID=GCA008085315_01815;Name=Transferrin-binding protein 1;locus_tag=GCA008085315_01815;product=Transferrin-binding protein 1;Parent=GCA008085315_01815_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A2X1PPW8 contig_22 Pyrodigal gene 63258 64562 . - . ID=GCA008085315_01816_gene;locus_tag=GCA008085315_01816;gene=oadB contig_22 Pyrodigal CDS 63258 64562 . - 0 ID=GCA008085315_01816;Name=Oxaloacetate decarboxylase beta chain;locus_tag=GCA008085315_01816;product=Oxaloacetate decarboxylase beta chain;gene=oadB;Parent=GCA008085315_01816_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1883,KEGG:K20509,RefSeq:WP_148321004.1,SO:0001217,UniParc:UPI0011DC6076,UniRef:UniRef100_UPI0011DC6076,UniRef:UniRef50_P13156,UniRef:UniRef90_E6KXT6;ec_number=7.2.4.1 contig_22 Pyrodigal gene 64573 66369 . - . ID=GCA008085315_01817_gene;locus_tag=GCA008085315_01817;gene=oadA contig_22 Pyrodigal CDS 64573 66369 . - 0 ID=GCA008085315_01817;Name=sodium-extruding oxaloacetate decarboxylase subunit alpha;locus_tag=GCA008085315_01817;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;Dbxref=GO:0006814,GO:0008948,GO:0015081;gene=oadA;Parent=GCA008085315_01817_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG5016,RefSeq:WP_005544789.1,SO:0001217,UniParc:UPI00022BFCF4,UniRef:UniRef100_UPI00022BFCF4,UniRef:UniRef50_P13187,UniRef:UniRef90_E6KXT5;ec_number=7.2.4.2 contig_22 Pyrodigal gene 66385 66651 . - . ID=GCA008085315_01818_gene;locus_tag=GCA008085315_01818;gene=oadG contig_22 Pyrodigal CDS 66385 66651 . - 0 ID=GCA008085315_01818;Name=putative oxaloacetate decarboxylase gamma chain;locus_tag=GCA008085315_01818;product=putative oxaloacetate decarboxylase gamma chain;gene=oadG;Parent=GCA008085315_01818_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG3630,RefSeq:WP_005544786.1,SO:0001217,UniParc:UPI0001B9F3F3,UniRef:UniRef100_UPI0001B9F3F3,UniRef:UniRef50_P13155,UniRef:UniRef90_A0A142G349 contig_22 Pyrodigal gene 67003 67194 . + . ID=GCA008085315_01819_gene;locus_tag=GCA008085315_01819 contig_22 Pyrodigal CDS 67003 67194 . + 0 ID=GCA008085315_01819;Name=hypothetical protein;locus_tag=GCA008085315_01819;product=hypothetical protein;Parent=GCA008085315_01819_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005553960.1,SO:0001217,UniParc:UPI00022AB83A,UniRef:UniRef100_A0A5D0EMI0,UniRef:UniRef50_A0A5D0EMI0,UniRef:UniRef90_A0A5D0EMI0 contig_22 Pyrodigal gene 67169 67546 . + . ID=GCA008085315_01820_gene;locus_tag=GCA008085315_01820 contig_22 Pyrodigal CDS 67169 67546 . + 0 ID=GCA008085315_01820;Name=DUF2335 domain-containing protein;locus_tag=GCA008085315_01820;product=DUF2335 domain-containing protein;Parent=GCA008085315_01820_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005544784.1,SO:0001217,UniParc:UPI0001B9F3F1,UniRef:UniRef100_UPI0001B9F3F1,UniRef:UniRef50_A0A1T0B1Y9,UniRef:UniRef90_A0A142G350 contig_22 Pyrodigal gene 67667 67942 . - . ID=GCA008085315_01821_gene;locus_tag=GCA008085315_01821;gene=hybG contig_22 Pyrodigal CDS 67667 67942 . - 0 ID=GCA008085315_01821;Name=hydrogenase maturation factor HybG;locus_tag=GCA008085315_01821;product=hydrogenase maturation factor HybG;gene=hybG;Parent=GCA008085315_01821_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0298,COG:O,RefSeq:WP_005544782.1,SO:0001217,UniParc:UPI0001B9F3F0,UniRef:UniRef100_UPI0001B9F3F0,UniRef:UniRef50_P20927,UniRef:UniRef90_E6KXT1 contig_22 Pyrodigal gene 68394 68933 . - . ID=GCA008085315_01822_gene;locus_tag=GCA008085315_01822 contig_22 Pyrodigal CDS 68394 68933 . - 0 ID=GCA008085315_01822;Name=hypothetical protein;locus_tag=GCA008085315_01822;product=hypothetical protein;Parent=GCA008085315_01822_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=PFAM:PF02885.22,PFAM:PF00697.28 contig_22 Pyrodigal gene 68945 69337 . - . ID=GCA008085315_01823_gene;locus_tag=GCA008085315_01823 contig_22 Pyrodigal CDS 68945 69337 . - 0 ID=GCA008085315_01823;Name=Tautomerase enzyme;locus_tag=GCA008085315_01823;product=Tautomerase enzyme;Parent=GCA008085315_01823_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005543439.1,SO:0001217,UniParc:UPI0001B9F3EC,UniRef:UniRef100_A0A142G355,UniRef:UniRef50_O86237,UniRef:UniRef90_U1R0T2 contig_22 Pyrodigal gene 69476 70000 . - . ID=GCA008085315_01824_gene;locus_tag=GCA008085315_01824;gene=pabA contig_22 Pyrodigal CDS 69476 70000 . - 0 ID=GCA008085315_01824;Name=anthranilate synthase;locus_tag=GCA008085315_01824;product=anthranilate synthase;gene=pabA;Parent=GCA008085315_01824_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0512,COG:EH,SO:0001217,UniRef:UniRef50_P00900,UniRef:UniRef90_E6KXS1 contig_22 Pyrodigal gene 70011 71558 . - . ID=GCA008085315_01825_gene;locus_tag=GCA008085315_01825;gene=trpE contig_22 Pyrodigal CDS 70011 71558 . - 0 ID=GCA008085315_01825;Name=anthranilate synthase component 1;locus_tag=GCA008085315_01825;product=anthranilate synthase component 1;Dbxref=GO:0004049,GO:0009058;gene=trpE;Parent=GCA008085315_01825_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0147,COG:EH,KEGG:K01657,RefSeq:WP_005544774.1,SO:0001217,UniParc:UPI00022BFCF1,UniRef:UniRef100_UPI00022BFCF1,UniRef:UniRef50_P22099,UniRef:UniRef90_E6KXS0;ec_number=4.1.3.27 contig_22 Pyrodigal gene 71726 72280 . - . ID=GCA008085315_01826_gene;locus_tag=GCA008085315_01826;gene=kdsC contig_22 Pyrodigal CDS 71726 72280 . - 0 ID=GCA008085315_01826;Name=3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC;locus_tag=GCA008085315_01826;product=3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC;gene=kdsC;Parent=GCA008085315_01826_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1778,COG:MR,RefSeq:WP_005544773.1,SO:0001217,UniParc:UPI0001B9F3E9,UniRef:UniRef100_UPI0001B9F3E9,UniRef:UniRef50_E6KXR9,UniRef:UniRef90_E6KXR9 contig_22 Pyrodigal gene 72280 73215 . - . ID=GCA008085315_01827_gene;locus_tag=GCA008085315_01827;gene=gutQ contig_22 Pyrodigal CDS 72280 73215 . - 0 ID=GCA008085315_01827;Name=Arabinose 5-phosphate isomerase;locus_tag=GCA008085315_01827;product=Arabinose 5-phosphate isomerase;gene=gutQ;Parent=GCA008085315_01827_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0794,COG:GM,RefSeq:WP_005544771.1,SO:0001217,UniParc:UPI0001B9F3E8,UniRef:UniRef100_UPI0001B9F3E8,UniRef:UniRef50_P45313,UniRef:UniRef90_E6KXR8 contig_22 Infernal gene 73342 73730 . + . ID=GCA008085315_01828_gene;locus_tag=GCA008085315_01828;gene=RNaseP_bact_a contig_22 Infernal ncRNA 73342 73730 1e-41 + . ID=GCA008085315_01828;Name=Bacterial RNase P class A;locus_tag=GCA008085315_01828;product=Bacterial RNase P class A;Dbxref=RFAM:RF00010;Parent=GCA008085315_01828_gene;Note=SO:0000386;ncRNA_class=RNase_P_RNA;inference=profile:Rfam:RF00010 contig_22 Pyrodigal gene 73898 74773 . + . ID=GCA008085315_01829_gene;locus_tag=GCA008085315_01829;gene=htpX contig_22 Pyrodigal CDS 73898 74773 . + 0 ID=GCA008085315_01829;Name=protease HtpX;locus_tag=GCA008085315_01829;product=protease HtpX;Dbxref=GO:0004222,GO:0006508;gene=htpX;Parent=GCA008085315_01829_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0501,COG:O,RefSeq:WP_005544769.1,SO:0001217,UniParc:UPI0001B9F3E7,UniRef:UniRef100_UPI0001B9F3E7,UniRef:UniRef50_A3N147,UniRef:UniRef90_E6KXR7;ec_number=3.4.24.- contig_22 Pyrodigal gene 75035 76024 . + . ID=GCA008085315_01830_gene;locus_tag=GCA008085315_01830;gene=pheS contig_22 Pyrodigal CDS 75035 76024 . + 0 ID=GCA008085315_01830;Name=phenylalanine--tRNA ligase subunit alpha;locus_tag=GCA008085315_01830;product=phenylalanine--tRNA ligase subunit alpha;Dbxref=GO:0000049,GO:0000166,GO:0000287,GO:0004826,GO:0005524,GO:0005737,GO:0006432;gene=pheS;Parent=GCA008085315_01830_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0016,COG:J,KEGG:K01889,RefSeq:WP_148321002.1,SO:0001217,UniParc:UPI0011D7D6A0,UniRef:UniRef100_UPI0011D7D6A0,UniRef:UniRef50_P08312,UniRef:UniRef90_P43819;ec_number=6.1.1.20 contig_22 Pyrodigal gene 76044 78434 . + . ID=GCA008085315_01831_gene;locus_tag=GCA008085315_01831;gene=pheT contig_22 Pyrodigal CDS 76044 78434 . + 0 ID=GCA008085315_01831;Name=phenylalanine--tRNA ligase subunit beta;locus_tag=GCA008085315_01831;product=phenylalanine--tRNA ligase subunit beta;Dbxref=GO:0000287,GO:0004826,GO:0005524,GO:0006432;gene=pheT;Parent=GCA008085315_01831_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0073,COG:J,KEGG:K01890,RefSeq:WP_148321001.1,SO:0001217,UniParc:UPI0011D49FF1,UniRef:UniRef100_UPI0011D49FF1,UniRef:UniRef50_P07395,UniRef:UniRef90_A0A142G362;ec_number=6.1.1.20 contig_22 Pyrodigal gene 78438 78734 . + . ID=GCA008085315_01832_gene;locus_tag=GCA008085315_01832;gene=hupA contig_22 Pyrodigal CDS 78438 78734 . + 0 ID=GCA008085315_01832;Name=integration host factor subunit alpha;locus_tag=GCA008085315_01832;product=integration host factor subunit alpha;Dbxref=GO:0003677,GO:0006310,GO:0006355;gene=hupA;Parent=GCA008085315_01832_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:B,COG:COG0776,RefSeq:WP_005543400.1,SO:0001217,UniParc:UPI0001B9F3E4,UniRef:UniRef100_A0A142G363,UniRef:UniRef50_Q9CN18,UniRef:UniRef90_A0A142G363 contig_22 Pyrodigal gene 78786 79274 . + . ID=GCA008085315_01833_gene;locus_tag=GCA008085315_01833;gene=nlpC contig_22 Pyrodigal CDS 78786 79274 . + 0 ID=GCA008085315_01833;Name=Endopeptidase;locus_tag=GCA008085315_01833;product=Endopeptidase;gene=nlpC;Parent=GCA008085315_01833_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0791,COG:M,RefSeq:WP_005544763.1,SO:0001217,UniParc:UPI0001B9F3E3,UniRef:UniRef100_G4A7T5,UniRef:UniRef50_Q57223,UniRef:UniRef90_A0A142G364 contig_22 Pyrodigal gene 79369 80334 . - . ID=GCA008085315_01834_gene;locus_tag=GCA008085315_01834;gene=ttcA contig_22 Pyrodigal CDS 79369 80334 . - 0 ID=GCA008085315_01834;Name=tRNA 2-thiocytidine(32) synthetase TtcA;locus_tag=GCA008085315_01834;product=tRNA 2-thiocytidine(32) synthetase TtcA;Dbxref=GO:0008033;gene=ttcA;Parent=GCA008085315_01834_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K14058,RefSeq:WP_187370258.1,SO:0001217,UniParc:UPI00165274EA,UniRef:UniRef100_UPI00165274EA,UniRef:UniRef50_Q5F956,UniRef:UniRef90_G4A7T4;ec_number=2.8.1.- contig_22 Pyrodigal gene 80475 80891 . + . ID=GCA008085315_01835_gene;locus_tag=GCA008085315_01835;gene=doxX contig_22 Pyrodigal CDS 80475 80891 . + 0 ID=GCA008085315_01835;Name=DoxX family protein;locus_tag=GCA008085315_01835;product=DoxX family protein;gene=doxX;Parent=GCA008085315_01835_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2259,COG:S,RefSeq:WP_005544757.1,SO:0001217,UniParc:UPI0001B9F3E0,UniRef:UniRef100_UPI0001B9F3E0,UniRef:UniRef50_A0A5D0EL34,UniRef:UniRef90_A0A5D0EL34 contig_22 Pyrodigal gene 80981 82993 . - . ID=GCA008085315_01836_gene;locus_tag=GCA008085315_01836 contig_22 Pyrodigal CDS 80981 82993 . - 0 ID=GCA008085315_01836;Name=TonB-dependent receptor;locus_tag=GCA008085315_01836;product=TonB-dependent receptor;Parent=GCA008085315_01836_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148320999.1,SO:0001217,UniParc:UPI0011D5FC55,UniRef:UniRef100_UPI0011D5FC55,UniRef:UniRef50_F0ESX6,UniRef:UniRef90_A0A5D0EKF8 contig_22 Pyrodigal gene 82995 83624 . - . ID=GCA008085315_01837_gene;locus_tag=GCA008085315_01837 contig_22 Pyrodigal CDS 82995 83624 . - 0 ID=GCA008085315_01837;Name=Chemotaxis protein;locus_tag=GCA008085315_01837;product=Chemotaxis protein;Parent=GCA008085315_01837_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A1F0UG32,UniRef:UniRef90_A0A5D0EKB3 contig_22 Pyrodigal gene 83703 84704 . + . ID=GCA008085315_01838_gene;locus_tag=GCA008085315_01838;gene=fepB contig_22 Pyrodigal CDS 83703 84704 . + 0 ID=GCA008085315_01838;Name=Iron ABC transporter substrate-binding protein;locus_tag=GCA008085315_01838;product=Iron ABC transporter substrate-binding protein;gene=fepB;Parent=GCA008085315_01838_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0614,COG:P,RefSeq:WP_005544749.1,SO:0001217,UniParc:UPI0001B9F3DD,UniRef:UniRef100_UPI0001B9F3DD,UniRef:UniRef50_P44148,UniRef:UniRef90_A0A5D0EKB6 contig_22 Pyrodigal gene 84704 85717 . + . ID=GCA008085315_01839_gene;locus_tag=GCA008085315_01839;gene=fepD contig_22 Pyrodigal CDS 84704 85717 . + 0 ID=GCA008085315_01839;Name=Iron ABC transporter permease;locus_tag=GCA008085315_01839;product=Iron ABC transporter permease;gene=fepD;Parent=GCA008085315_01839_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0609,COG:P,RefSeq:WP_005544748.1,SO:0001217,UniParc:UPI00022AC621,UniRef:UniRef100_UPI00022AC621,UniRef:UniRef50_A0A5D0EL22,UniRef:UniRef90_A0A5D0EL22 contig_22 Pyrodigal gene 85714 85803 . + . ID=GCA008085315_01840_gene;locus_tag=GCA008085315_01840 contig_22 Pyrodigal CDS 85714 85803 . + 0 ID=GCA008085315_01840;Name=hypothetical protein;locus_tag=GCA008085315_01840;product=hypothetical protein;Parent=GCA008085315_01840_gene;inference=ab initio prediction:Pyrodigal:3.5 contig_22 Pyrodigal gene 85816 86463 . + . ID=GCA008085315_01841_gene;locus_tag=GCA008085315_01841;gene=fepC contig_22 Pyrodigal CDS 85816 86463 . + 0 ID=GCA008085315_01841;Name=ABC transporter ATP-binding protein;locus_tag=GCA008085315_01841;product=ABC transporter ATP-binding protein;gene=fepC;Parent=GCA008085315_01841_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1120,COG:PH,SO:0001217,UniRef:UniRef50_Q57243,UniRef:UniRef90_A0A5D0EL77 contig_22 Pyrodigal gene 86558 87418 . + . ID=GCA008085315_01842_gene;locus_tag=GCA008085315_01842 contig_22 Pyrodigal CDS 86558 87418 . + 0 ID=GCA008085315_01842;Name=TonB-dependent receptor plug domain-containing protein;locus_tag=GCA008085315_01842;product=TonB-dependent receptor plug domain-containing protein;Parent=GCA008085315_01842_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A376RMY7,UniRef:UniRef90_UPI001E38C00F contig_22 Pyrodigal gene 87446 87853 . + . ID=GCA008085315_01843_gene;locus_tag=GCA008085315_01843;pseudogene=unitary contig_22 Pyrodigal CDS 87446 87853 . + 0 ID=GCA008085315_01843;Name=hypothetical protein;locus_tag=GCA008085315_01843;product=hypothetical protein;pseudogene=unitary;Parent=GCA008085315_01843_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_UPI0028E8594A,UniRef:UniRef90_UPI0028E8594A contig_22 Pyrodigal gene 87881 88954 . + . ID=GCA008085315_01844_gene;locus_tag=GCA008085315_01844;pseudogene=unitary contig_22 Pyrodigal CDS 87881 88954 . + 0 ID=GCA008085315_01844;Name=TonB-dependent receptor domain-containing protein;locus_tag=GCA008085315_01844;product=TonB-dependent receptor domain-containing protein;pseudogene=unitary;Parent=GCA008085315_01844_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_UPI0019022FA2,UniRef:UniRef90_UPI001E398F4A contig_22 Pyrodigal gene 89073 89282 . - . ID=GCA008085315_01845_gene;locus_tag=GCA008085315_01845 contig_22 Pyrodigal CDS 89073 89282 . - 0 ID=GCA008085315_01845;Name=molybdopterin-binding protein;locus_tag=GCA008085315_01845;product=molybdopterin-binding protein;Parent=GCA008085315_01845_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148320997.1,SO:0001217,UniParc:UPI0011DB7417,UniRef:UniRef100_UPI0011DB7417,UniRef:UniRef50_P08854,UniRef:UniRef90_UPI0011DB7417 contig_22 Pyrodigal gene 89635 90399 . - . ID=GCA008085315_01846_gene;locus_tag=GCA008085315_01846 contig_22 Pyrodigal CDS 89635 90399 . - 0 ID=GCA008085315_01846;Name=ABC transporter substrate-binding protein;locus_tag=GCA008085315_01846;product=ABC transporter substrate-binding protein;Parent=GCA008085315_01846_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_UPI000D305217 contig_22 Pyrodigal gene 90412 90762 . - . ID=GCA008085315_01847_gene;locus_tag=GCA008085315_01847;gene=fepC;pseudogene=unitary contig_22 Pyrodigal CDS 90412 90762 . - 0 ID=GCA008085315_01847;Name=ABC transporter ATP-binding protein;locus_tag=GCA008085315_01847;product=ABC transporter ATP-binding protein;pseudogene=unitary;gene=fepC;Parent=GCA008085315_01847_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1120,COG:PH,SO:0001217,UniRef:UniRef50_E6KXQ2,UniRef:UniRef90_A0A142G3F7 contig_22 Pyrodigal gene 90766 91206 . - . ID=GCA008085315_01848_gene;locus_tag=GCA008085315_01848;gene=fepC;pseudogene=unitary contig_22 Pyrodigal CDS 90766 91206 . - 0 ID=GCA008085315_01848;Name=ABC transporter ATP-binding protein;locus_tag=GCA008085315_01848;product=ABC transporter ATP-binding protein;pseudogene=unitary;gene=fepC;Parent=GCA008085315_01848_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1120,COG:PH,SO:0001217,UniRef:UniRef50_E6KXQ2,UniRef:UniRef90_A0A142G3F7 contig_22 Pyrodigal gene 91206 92225 . - . ID=GCA008085315_01849_gene;locus_tag=GCA008085315_01849;gene=fepD contig_22 Pyrodigal CDS 91206 92225 . - 0 ID=GCA008085315_01849;Name=Iron ABC transporter permease;locus_tag=GCA008085315_01849;product=Iron ABC transporter permease;gene=fepD;Parent=GCA008085315_01849_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0609,COG:P,SO:0001217,UniRef:UniRef50_V7IEB7,UniRef:UniRef90_A0A142G3F8 contig_22 Pyrodigal gene 92353 93759 . - . ID=GCA008085315_01850_gene;locus_tag=GCA008085315_01850;gene=tolC contig_22 Pyrodigal CDS 92353 93759 . - 0 ID=GCA008085315_01850;Name=TolC family protein;locus_tag=GCA008085315_01850;product=TolC family protein;gene=tolC;Parent=GCA008085315_01850_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1538,COG:M,RefSeq:WP_148320995.1,SO:0001217,UniParc:UPI0011D36A7A,UniRef:UniRef100_UPI0011D36A7A,UniRef:UniRef50_A0A336N9K5,UniRef:UniRef90_A0AAC8Y243 contig_22 Pyrodigal gene 93779 94906 . - . ID=GCA008085315_01851_gene;locus_tag=GCA008085315_01851;gene=yadH contig_22 Pyrodigal CDS 93779 94906 . - 0 ID=GCA008085315_01851;Name=ABC transporter permease;locus_tag=GCA008085315_01851;product=ABC transporter permease;gene=yadH;Parent=GCA008085315_01851_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0842,COG:V,RefSeq:WP_005568733.1,SO:0001217,UniParc:UPI0001B9F365,UniRef:UniRef100_UPI0001B9F365,UniRef:UniRef50_Q65T00,UniRef:UniRef90_A0A142G367 contig_22 Pyrodigal gene 94908 97652 . - . ID=GCA008085315_01852_gene;locus_tag=GCA008085315_01852;gene=rbbA contig_22 Pyrodigal CDS 94908 97652 . - 0 ID=GCA008085315_01852;Name=ribosome-associated ATPase/putative transporter RbbA;locus_tag=GCA008085315_01852;product=ribosome-associated ATPase/putative transporter RbbA;Dbxref=GO:0005524,GO:0016020,GO:0042626,GO:0043190,GO:0055085;gene=rbbA;Parent=GCA008085315_01852_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1131,COG:JV,RefSeq:WP_148320993.1,SO:0001217,UniParc:UPI0011D345E1,UniRef:UniRef100_UPI0011D345E1,UniRef:UniRef50_A0A348FZJ2,UniRef:UniRef90_A0A5D0EMJ8 contig_22 Pyrodigal gene 97655 98011 . - . ID=GCA008085315_01853_gene;locus_tag=GCA008085315_01853;gene=acrA;pseudogene=unitary contig_22 Pyrodigal CDS 97655 98011 . - 0 ID=GCA008085315_01853;Name=AcrA protein;locus_tag=GCA008085315_01853;product=AcrA protein;pseudogene=unitary;gene=acrA;Parent=GCA008085315_01853_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_G4A7R6,UniRef:UniRef90_G4A7R6 contig_22 Pyrodigal gene 98057 98614 . - . ID=GCA008085315_01854_gene;locus_tag=GCA008085315_01854;gene=emrA;pseudogene=unitary contig_22 Pyrodigal CDS 98057 98614 . - 0 ID=GCA008085315_01854;Name=HlyD family efflux transporter periplasmic adaptor subunit;locus_tag=GCA008085315_01854;product=HlyD family efflux transporter periplasmic adaptor subunit;pseudogene=unitary;gene=emrA;Parent=GCA008085315_01854_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1566,COG:V,SO:0001217,UniRef:UniRef50_F0EXD9,UniRef:UniRef90_A0A5D0EMJ9 contig_22 Pyrodigal gene 98762 99325 . + . ID=GCA008085315_01855_gene;locus_tag=GCA008085315_01855;gene=acrR contig_22 Pyrodigal CDS 98762 99325 . + 0 ID=GCA008085315_01855;Name=AcrR family transcriptional regulator;locus_tag=GCA008085315_01855;product=AcrR family transcriptional regulator;gene=acrR;Parent=GCA008085315_01855_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1309,COG:K,RefSeq:WP_005568741.1,SO:0001217,UniParc:UPI00022ADBD2,UniRef:UniRef100_UPI00022ADBD2,UniRef:UniRef50_A0A142FXA0,UniRef:UniRef90_A0A142FXA0 contig_22 Pyrodigal gene 99376 100566 . - . ID=GCA008085315_01856_gene;locus_tag=GCA008085315_01856;gene=tyrB contig_22 Pyrodigal CDS 99376 100566 . - 0 ID=GCA008085315_01856;Name=Aminotransferase;locus_tag=GCA008085315_01856;product=Aminotransferase;gene=tyrB;Parent=GCA008085315_01856_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1448,COG:E,RefSeq:WP_005544723.1,SO:0001217,UniParc:UPI00022ACD40,UniRef:UniRef100_UPI00022ACD40,UniRef:UniRef50_P00509,UniRef:UniRef90_E6KXQ0 contig_22 Pyrodigal gene 100988 103597 . + . ID=GCA008085315_01857_gene;locus_tag=GCA008085315_01857;gene=pepN contig_22 Pyrodigal CDS 100988 103597 . + 0 ID=GCA008085315_01857;Name=aminopeptidase N;locus_tag=GCA008085315_01857;product=aminopeptidase N;Dbxref=GO:0004177,GO:0006508,GO:0008237,GO:0008270;gene=pepN;Parent=GCA008085315_01857_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0308,COG:E,RefSeq:WP_148320992.1,SO:0001217,UniParc:UPI0011D9009C,UniRef:UniRef100_UPI0011D9009C,UniRef:UniRef50_A0A432WRU0,UniRef:UniRef90_E6KXP7;ec_number=3.4.11.2 contig_22 Pyrodigal gene 103670 104689 . + . ID=GCA008085315_01858_gene;locus_tag=GCA008085315_01858;gene=pyrD contig_22 Pyrodigal CDS 103670 104689 . + 0 ID=GCA008085315_01858;Name=quinone-dependent dihydroorotate dehydrogenase;locus_tag=GCA008085315_01858;product=quinone-dependent dihydroorotate dehydrogenase;Dbxref=GO:0004152,GO:0006222,GO:0016020;gene=pyrD;Parent=GCA008085315_01858_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0167,COG:F,RefSeq:WP_005574487.1,SO:0001217,UniParc:UPI0001B9F35D,UniRef:UniRef100_UPI0001B9F35D,UniRef:UniRef50_Q8ZG91,UniRef:UniRef90_A0A142FXA2;ec_number=1.3.5.2 contig_22 Pyrodigal gene 104703 105539 . + . ID=GCA008085315_01859_gene;locus_tag=GCA008085315_01859;gene=yciV contig_22 Pyrodigal CDS 104703 105539 . + 0 ID=GCA008085315_01859;Name=PHP domain-containing protein;locus_tag=GCA008085315_01859;product=PHP domain-containing protein;gene=yciV;Parent=GCA008085315_01859_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0613,COG:F,KEGG:K07053,RefSeq:WP_148320991.1,SO:0001217,UniParc:UPI0011D6B901,UniRef:UniRef100_UPI0011D6B901,UniRef:UniRef50_P44176,UniRef:UniRef90_A0A5D0EML1;ec_number=3.1.3.97 contig_22 Pyrodigal gene 105777 108383 . + . ID=GCA008085315_01860_gene;locus_tag=GCA008085315_01860;gene=topA contig_22 Pyrodigal CDS 105777 108383 . + 0 ID=GCA008085315_01860;Name=type I DNA topoisomerase;locus_tag=GCA008085315_01860;product=type I DNA topoisomerase;Dbxref=GO:0003677,GO:0003917,GO:0005737,GO:0006260,GO:0006265;gene=topA;Parent=GCA008085315_01860_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0551,COG:L,KEGG:K03168,RefSeq:WP_005544715.1,SO:0001217,UniParc:UPI0001B9F35B,UniRef:UniRef100_UPI0001B9F35B,UniRef:UniRef50_P43012,UniRef:UniRef90_A0A448FAG1;ec_number=5.6.2.1 contig_22 Pyrodigal gene 108468 109304 . - . ID=GCA008085315_01861_gene;locus_tag=GCA008085315_01861 contig_22 Pyrodigal CDS 108468 109304 . - 0 ID=GCA008085315_01861;Name=DUF4198 domain-containing protein;locus_tag=GCA008085315_01861;product=DUF4198 domain-containing protein;Parent=GCA008085315_01861_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5266,COG:R,RefSeq:WP_005568752.1,SO:0001217,UniParc:UPI0001B9F35A,UniRef:UniRef100_UPI0001B9F35A,UniRef:UniRef50_A0A376BTC0,UniRef:UniRef90_A0A142FXA5 contig_22 Pyrodigal gene 109431 110363 . - . ID=GCA008085315_01862_gene;locus_tag=GCA008085315_01862;gene=uspE contig_22 Pyrodigal CDS 109431 110363 . - 0 ID=GCA008085315_01862;Name=universal stress protein UspE;locus_tag=GCA008085315_01862;product=universal stress protein UspE;gene=uspE;Parent=GCA008085315_01862_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0589,COG:T,RefSeq:WP_005544712.1,SO:0001217,UniParc:UPI0001B9F359,UniRef:UniRef100_UPI0001B9F359,UniRef:UniRef50_P44195,UniRef:UniRef90_A0A142FXA6 contig_22 Pyrodigal gene 110482 111255 . - . ID=GCA008085315_01863_gene;locus_tag=GCA008085315_01863;gene=fnr contig_22 Pyrodigal CDS 110482 111255 . - 0 ID=GCA008085315_01863;Name=Anaerobic regulatory protein;locus_tag=GCA008085315_01863;product=Anaerobic regulatory protein;Dbxref=GO:0003677,GO:0003700,GO:0005829,GO:0046872,GO:0051539;gene=fnr;Parent=GCA008085315_01863_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0664,COG:T,RefSeq:WP_148320990.1,SO:0001217,UniParc:UPI0011DB07CE,UniRef:UniRef100_UPI0011DB07CE,UniRef:UniRef50_P0A9E5,UniRef:UniRef90_Q9EXQ1 contig_22 Pyrodigal gene 111363 111533 . + . ID=GCA008085315_01864_gene;locus_tag=GCA008085315_01864 contig_22 Pyrodigal CDS 111363 111533 . + 0 ID=GCA008085315_01864;Name=hypothetical protein;locus_tag=GCA008085315_01864;product=hypothetical protein;Parent=GCA008085315_01864_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005544707.1,SO:0001217,UniParc:UPI0001B9F357,UniRef:UniRef100_UPI0001B9F357,UniRef:UniRef50_E6KXP1,UniRef:UniRef90_UPI00192E6EB9 contig_22 Pyrodigal gene 111595 112092 . - . ID=GCA008085315_01865_gene;locus_tag=GCA008085315_01865;gene=ftnA contig_22 Pyrodigal CDS 111595 112092 . - 0 ID=GCA008085315_01865;Name=non-heme ferritin;locus_tag=GCA008085315_01865;product=non-heme ferritin;Dbxref=GO:0006879,GO:0008199;gene=ftnA;Parent=GCA008085315_01865_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1528,COG:P,RefSeq:WP_005544705.1,SO:0001217,UniParc:UPI00006622A6,UniRef:UniRef100_Q2WGP3,UniRef:UniRef50_P43708,UniRef:UniRef90_Q2WGP3;ec_number=1.16.3.2 contig_22 Pyrodigal gene 112108 112593 . - . ID=GCA008085315_01866_gene;locus_tag=GCA008085315_01866;gene=ftnA contig_22 Pyrodigal CDS 112108 112593 . - 0 ID=GCA008085315_01866;Name=non-heme ferritin;locus_tag=GCA008085315_01866;product=non-heme ferritin;Dbxref=GO:0006879,GO:0008199;gene=ftnA;Parent=GCA008085315_01866_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1528,COG:P,RefSeq:WP_005544704.1,SO:0001217,UniParc:UPI00006622A5,UniRef:UniRef100_Q2WGP4,UniRef:UniRef50_Q2WGP4,UniRef:UniRef90_Q2WGP4;ec_number=1.16.3.2 contig_22 Infernal gene 112947 113220 . - . ID=GCA008085315_01867_gene;locus_tag=GCA008085315_01867;gene=JA03 contig_22 Infernal ncRNA 112947 113220 3.8e-42 - . ID=GCA008085315_01867;Name=Aggregatibacter sRNA JA03;locus_tag=GCA008085315_01867;product=Aggregatibacter sRNA JA03;Dbxref=RFAM:RF02731;Parent=GCA008085315_01867_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02731 contig_22 Pyrodigal gene 113414 114724 . - . ID=GCA008085315_01868_gene;locus_tag=GCA008085315_01868 contig_22 Pyrodigal CDS 113414 114724 . - 0 ID=GCA008085315_01868;Name=Bacterial type II and III secretion system protein;locus_tag=GCA008085315_01868;product=Bacterial type II and III secretion system protein;Parent=GCA008085315_01868_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0AAU8B2R4,UniRef:UniRef90_UPI002D76E965 contig_22 Pyrodigal gene 114845 115066 . - . ID=GCA008085315_01869_gene;locus_tag=GCA008085315_01869 contig_22 Pyrodigal CDS 114845 115066 . - 0 ID=GCA008085315_01869;Name=Phage coat protein;locus_tag=GCA008085315_01869;product=Phage coat protein;Parent=GCA008085315_01869_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005573524.1,SO:0001217,UniParc:UPI00022ACA06,UniRef:UniRef100_UPI00022ACA06,UniRef:UniRef50_A0AAC9AHH8,UniRef:UniRef90_A0AAC9AHH8 ##sequence-region contig_23 1 107393 contig_23 Bakta region 1 107393 . + . ID=contig_23;Name=contig_23 contig_23 Pyrodigal gene 53 2128 . - . ID=GCA008085315_01870_gene;locus_tag=GCA008085315_01870;gene=malQ contig_23 Pyrodigal CDS 53 2128 . - 0 ID=GCA008085315_01870;Name=4-alpha-glucanotransferase;locus_tag=GCA008085315_01870;product=4-alpha-glucanotransferase;Dbxref=GO:0004134,GO:0005975;gene=malQ;Parent=GCA008085315_01870_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1640,COG:G,KEGG:K00705,RefSeq:WP_005546510.1,SO:0001217,UniParc:UPI0001B9F1E9,UniRef:UniRef100_UPI0001B9F1E9,UniRef:UniRef50_A0A248ZZA5,UniRef:UniRef90_A0A5D0ELU5;ec_number=2.4.1.25 contig_23 Pyrodigal gene 2231 4621 . - . ID=GCA008085315_01871_gene;locus_tag=GCA008085315_01871;gene=malP contig_23 Pyrodigal CDS 2231 4621 . - 0 ID=GCA008085315_01871;Name=maltodextrin phosphorylase;locus_tag=GCA008085315_01871;product=maltodextrin phosphorylase;Dbxref=GO:0005975,GO:0008184,GO:0030170;gene=malP;Parent=GCA008085315_01871_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0058,COG:G,RefSeq:WP_012820980.1,SO:0001217,UniParc:UPI0001B9F1EA,UniRef:UniRef100_UPI0001B9F1EA,UniRef:UniRef50_A0A248ZXP9,UniRef:UniRef90_A0A5D0EL79;ec_number=2.4.1.1 contig_23 Pyrodigal gene 4790 5749 . + . ID=GCA008085315_01872_gene;locus_tag=GCA008085315_01872;gene=malT contig_23 Pyrodigal CDS 4790 5749 . + 0 ID=GCA008085315_01872;Name=ATP-dependent transcriptional activator malT;locus_tag=GCA008085315_01872;product=ATP-dependent transcriptional activator malT;gene=malT;Parent=GCA008085315_01872_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0AAN2RA33 contig_23 Pyrodigal gene 5825 7504 . + . ID=GCA008085315_01873_gene;locus_tag=GCA008085315_01873 contig_23 Pyrodigal CDS 5825 7504 . + 0 ID=GCA008085315_01873;Name=Regulatory protein;locus_tag=GCA008085315_01873;product=Regulatory protein;Parent=GCA008085315_01873_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A376CYP0 contig_23 Pyrodigal gene 7657 8517 . - . ID=GCA008085315_01874_gene;locus_tag=GCA008085315_01874;gene=tehB contig_23 Pyrodigal CDS 7657 8517 . - 0 ID=GCA008085315_01874;Name=SAM-dependent methyltransferase TehB;locus_tag=GCA008085315_01874;product=SAM-dependent methyltransferase TehB;Dbxref=GO:0008757,GO:0046690;gene=tehB;Parent=GCA008085315_01874_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3615,COG:P,RefSeq:WP_148321088.1,SO:0001217,UniParc:UPI0011D76240,UniRef:UniRef100_UPI0011D76240,UniRef:UniRef50_E1X791,UniRef:UniRef90_A0A142G383;ec_number=2.1.1.- contig_23 Pyrodigal gene 8911 11568 . + . ID=GCA008085315_01875_gene;locus_tag=GCA008085315_01875;gene=aceE contig_23 Pyrodigal CDS 8911 11568 . + 0 ID=GCA008085315_01875;Name=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;locus_tag=GCA008085315_01875;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;Dbxref=GO:0004738,GO:0006086,GO:0045254;gene=aceE;Parent=GCA008085315_01875_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG2609,KEGG:K00163,RefSeq:WP_005588937.1,SO:0001217,UniParc:UPI0002ABE3A2,UniRef:UniRef100_UPI0002ABE3A2,UniRef:UniRef50_C3PHN9,UniRef:UniRef90_E6KX85;ec_number=1.2.4.1 contig_23 Pyrodigal gene 11606 13267 . + . ID=GCA008085315_01876_gene;locus_tag=GCA008085315_01876 contig_23 Pyrodigal CDS 11606 13267 . + 0 ID=GCA008085315_01876;Name=Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex;locus_tag=GCA008085315_01876;product=Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex;Parent=GCA008085315_01876_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_P06959 contig_23 Pyrodigal gene 13361 14785 . + . ID=GCA008085315_01877_gene;locus_tag=GCA008085315_01877;gene=lpdA contig_23 Pyrodigal CDS 13361 14785 . + 0 ID=GCA008085315_01877;Name=dihydrolipoyl dehydrogenase;locus_tag=GCA008085315_01877;product=dihydrolipoyl dehydrogenase;Dbxref=GO:0004148,GO:0050660;gene=lpdA;Parent=GCA008085315_01877_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1249,KEGG:K00382,RefSeq:WP_026161172.1,SO:0001217,UniParc:UPI000477A74F,UniRef:UniRef100_UPI000477A74F,UniRef:UniRef50_P0A9P0,UniRef:UniRef90_E6KX87;ec_number=1.8.1.4 contig_23 Pyrodigal gene 15215 15769 . - . ID=GCA008085315_01878_gene;locus_tag=GCA008085315_01878;gene=nfnB contig_23 Pyrodigal CDS 15215 15769 . - 0 ID=GCA008085315_01878;Name=NAD(P)H nitroreductase;locus_tag=GCA008085315_01878;product=NAD(P)H nitroreductase;Dbxref=GO:0016491;gene=nfnB;Parent=GCA008085315_01878_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0778,RefSeq:WP_005588935.1,SO:0001217,UniParc:UPI0001B9F23F,UniRef:UniRef100_UPI0001B9F23F,UniRef:UniRef50_A0A1V3JV23,UniRef:UniRef90_A0A5D0EKW1 contig_23 Pyrodigal gene 15893 17773 . + . ID=GCA008085315_01879_gene;locus_tag=GCA008085315_01879;gene=sppA contig_23 Pyrodigal CDS 15893 17773 . + 0 ID=GCA008085315_01879;Name=signal peptide peptidase SppA;locus_tag=GCA008085315_01879;product=signal peptide peptidase SppA;Dbxref=GO:0006465,GO:0006508,GO:0008233,GO:0016020;gene=sppA;Parent=GCA008085315_01879_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0616,COG:O,KEGG:K04773,RefSeq:WP_148321085.1,SO:0001217,UniParc:UPI0011D644B7,UniRef:UniRef100_UPI0011D644B7,UniRef:UniRef50_P45243,UniRef:UniRef90_A0A5D0EME1;ec_number=3.4.21.- contig_23 Pyrodigal gene 17814 18938 . + . ID=GCA008085315_01880_gene;locus_tag=GCA008085315_01880;gene=tyrA contig_23 Pyrodigal CDS 17814 18938 . + 0 ID=GCA008085315_01880;Name=bifunctional chorismate mutase/prephenate dehydrogenase;locus_tag=GCA008085315_01880;product=bifunctional chorismate mutase/prephenate dehydrogenase;Dbxref=GO:0004106,GO:0004665,GO:0006571,GO:0008977,GO:0046417;gene=tyrA;Parent=GCA008085315_01880_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K14187,RefSeq:WP_005575234.1,SO:0001217,UniParc:UPI0001B9F241,UniRef:UniRef100_UPI0001B9F241,UniRef:UniRef50_P07023,UniRef:UniRef90_A0A5D0ELT9;ec_number=5.4.99.5 contig_23 Pyrodigal gene 19012 19635 . + . ID=GCA008085315_01881_gene;locus_tag=GCA008085315_01881 contig_23 Pyrodigal CDS 19012 19635 . + 0 ID=GCA008085315_01881;Name=L-threonylcarbamoyladenylate synthase;locus_tag=GCA008085315_01881;product=L-threonylcarbamoyladenylate synthase;Dbxref=GO:0003725,GO:0006400,GO:0061710;Parent=GCA008085315_01881_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005588933.1,SO:0001217,UniParc:UPI0001B9F242,UniRef:UniRef100_UPI0001B9F242,UniRef:UniRef50_A0A3N6GTV9,UniRef:UniRef90_E6KX80;ec_number=2.7.7.87 contig_23 Pyrodigal gene 19690 20676 . + . ID=GCA008085315_01882_gene;locus_tag=GCA008085315_01882;gene=rluB contig_23 Pyrodigal CDS 19690 20676 . + 0 ID=GCA008085315_01882;Name=23S rRNA pseudouridine(2605) synthase RluB;locus_tag=GCA008085315_01882;product=23S rRNA pseudouridine(2605) synthase RluB;Dbxref=GO:0001522,GO:0003723,GO:0009982;gene=rluB;Parent=GCA008085315_01882_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1187,COG:J,KEGG:K06178,RefSeq:WP_005546482.1,SO:0001217,UniParc:UPI0001B9F243,UniRef:UniRef100_UPI0001B9F243,UniRef:UniRef50_P45104,UniRef:UniRef90_G4A7G8;ec_number=5.4.99.22 contig_23 Pyrodigal gene 20688 21659 . + . ID=GCA008085315_01883_gene;locus_tag=GCA008085315_01883;gene=cysB contig_23 Pyrodigal CDS 20688 21659 . + 0 ID=GCA008085315_01883;Name=HTH-type transcriptional regulator CysB;locus_tag=GCA008085315_01883;product=HTH-type transcriptional regulator CysB;Dbxref=GO:0003700,GO:0006355;gene=cysB;Parent=GCA008085315_01883_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0583,COG:K,RefSeq:WP_005546480.1,SO:0001217,UniParc:UPI0001B9F244,UniRef:UniRef100_UPI0001B9F244,UniRef:UniRef50_P0A9F3,UniRef:UniRef90_A0A5D0EL87 contig_23 Pyrodigal gene 21744 22571 . + . ID=GCA008085315_01884_gene;locus_tag=GCA008085315_01884;gene=dapD contig_23 Pyrodigal CDS 21744 22571 . + 0 ID=GCA008085315_01884;Name=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;locus_tag=GCA008085315_01884;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;Dbxref=GO:0005737,GO:0008666,GO:0009089,GO:0016779,GO:0019877;gene=dapD;Parent=GCA008085315_01884_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2171,COG:E,RefSeq:WP_005546477.1,SO:0001217,UniParc:UPI0001B9F245,UniRef:UniRef100_UPI0001B9F245,UniRef:UniRef50_P45284,UniRef:UniRef90_P45284;ec_number=2.3.1.117 contig_23 Pyrodigal gene 22686 23006 . - . ID=GCA008085315_01885_gene;locus_tag=GCA008085315_01885;gene=yciU contig_23 Pyrodigal CDS 22686 23006 . - 0 ID=GCA008085315_01885;Name=HI1450 family dsDNA-mimic protein;locus_tag=GCA008085315_01885;product=HI1450 family dsDNA-mimic protein;gene=yciU;Parent=GCA008085315_01885_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3099,COG:S,RefSeq:WP_005546474.1,SO:0001217,UniParc:UPI0001B9F246,UniRef:UniRef100_UPI0001B9F246,UniRef:UniRef50_P44199,UniRef:UniRef90_A0A142FXV7 contig_23 Pyrodigal gene 23477 24475 . - . ID=GCA008085315_01886_gene;locus_tag=GCA008085315_01886;gene=purR contig_23 Pyrodigal CDS 23477 24475 . - 0 ID=GCA008085315_01886;Name=HTH-type transcriptional repressor PurR;locus_tag=GCA008085315_01886;product=HTH-type transcriptional repressor PurR;Dbxref=GO:0003677,GO:0006355;gene=purR;Parent=GCA008085315_01886_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1609,COG:K,RefSeq:WP_005567221.1,SO:0001217,UniParc:UPI0001B9F248,UniRef:UniRef100_UPI0001B9F248,UniRef:UniRef50_P0ACP7,UniRef:UniRef90_A0A336N580 contig_23 Pyrodigal gene 24781 25884 . - . ID=GCA008085315_01887_gene;locus_tag=GCA008085315_01887;gene=mET2 contig_23 Pyrodigal CDS 24781 25884 . - 0 ID=GCA008085315_01887;Name=homoserine O-acetyltransferase;locus_tag=GCA008085315_01887;product=homoserine O-acetyltransferase;Dbxref=GO:0009058,GO:0016747;gene=mET2;Parent=GCA008085315_01887_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2021,COG:E,RefSeq:WP_005546469.1,SO:0001217,UniParc:UPI0001B9F249,UniRef:UniRef100_UPI0001B9F249,UniRef:UniRef50_P45131,UniRef:UniRef90_A0A5D0EJW0;ec_number=2.3.1.31 contig_23 Pyrodigal gene 26077 26790 . + . ID=GCA008085315_01888_gene;locus_tag=GCA008085315_01888;gene=sanA contig_23 Pyrodigal CDS 26077 26790 . + 0 ID=GCA008085315_01888;Name=Vancomycin high temperature exclusion protein;locus_tag=GCA008085315_01888;product=Vancomycin high temperature exclusion protein;gene=sanA;Parent=GCA008085315_01888_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2949,COG:M,KEGG:K03748,RefSeq:WP_005542400.1,SO:0001217,UniParc:UPI0001B9F24A,UniRef:UniRef100_A0A142FXV4,UniRef:UniRef50_P45130,UniRef:UniRef90_A0A142FXV4 contig_23 Pyrodigal gene 26774 27760 . - . ID=GCA008085315_01889_gene;locus_tag=GCA008085315_01889;gene=cra contig_23 Pyrodigal CDS 26774 27760 . - 0 ID=GCA008085315_01889;Name=catabolite repressor/activator;locus_tag=GCA008085315_01889;product=catabolite repressor/activator;Dbxref=GO:0003677,GO:0006355,GO:0009750;gene=cra;Parent=GCA008085315_01889_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1609,COG:K,KEGG:K03435,RefSeq:WP_148321084.1,SO:0001217,UniParc:UPI0011D35123,UniRef:UniRef100_UPI0011D35123,UniRef:UniRef50_A0A0A3ANR3,UniRef:UniRef90_A0A5D0EKW9 contig_23 Pyrodigal gene 30001 30483 . - . ID=GCA008085315_01890_gene;locus_tag=GCA008085315_01890;gene=trxA contig_23 Pyrodigal CDS 30001 30483 . - 0 ID=GCA008085315_01890;Name=Thioredoxin domain-containing protein;locus_tag=GCA008085315_01890;product=Thioredoxin domain-containing protein;gene=trxA;Parent=GCA008085315_01890_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0526,COG:O,RefSeq:WP_005546459.1,SO:0001217,UniParc:UPI0001B9F24E,UniRef:UniRef100_UPI0001B9F24E,UniRef:UniRef50_Q57127,UniRef:UniRef90_A0AAP7GVX0 contig_23 Pyrodigal gene 30498 31139 . - . ID=GCA008085315_01891_gene;locus_tag=GCA008085315_01891;gene=ccdA contig_23 Pyrodigal CDS 30498 31139 . - 0 ID=GCA008085315_01891;Name=Cytochrome C-type biogenesis protein CcdA;locus_tag=GCA008085315_01891;product=Cytochrome C-type biogenesis protein CcdA;gene=ccdA;Parent=GCA008085315_01891_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:CO,COG:COG0785,RefSeq:WP_005546457.1,SO:0001217,UniParc:UPI0001CA78CF,UniRef:UniRef100_A0A142FY76,UniRef:UniRef50_P44202,UniRef:UniRef90_E6KXC5 contig_23 Pyrodigal gene 31143 32213 . - . ID=GCA008085315_01892_gene;locus_tag=GCA008085315_01892;gene=msrAB contig_23 Pyrodigal CDS 31143 32213 . - 0 ID=GCA008085315_01892;Name=bifunctional methionine sulfoxide reductase B/A protein;locus_tag=GCA008085315_01892;product=bifunctional methionine sulfoxide reductase B/A protein;Dbxref=GO:0005737,GO:0006979,GO:0008113,GO:0030091,GO:0033743,GO:0033744,GO:0036211;gene=msrAB;Parent=GCA008085315_01892_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0229,COG:O,KEGG:K12267,RefSeq:WP_005546455.1,SO:0001217,UniParc:UPI000012F5C5,UniRef:UniRef100_Q9AL99,UniRef:UniRef50_Q9AL99,UniRef:UniRef90_Q9AL99;ec_number=1.8.4.12 contig_23 Pyrodigal gene 32429 33121 . + . ID=GCA008085315_01893_gene;locus_tag=GCA008085315_01893;gene=can contig_23 Pyrodigal CDS 32429 33121 . + 0 ID=GCA008085315_01893;Name=carbonate dehydratase;locus_tag=GCA008085315_01893;product=carbonate dehydratase;Dbxref=GO:0004089,GO:0008270,GO:0015976;gene=can;Parent=GCA008085315_01893_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0288,COG:P,KEGG:K01673,RefSeq:WP_005546453.1,SO:0001217,UniParc:UPI0001B9F250,UniRef:UniRef100_UPI0001B9F250,UniRef:UniRef50_A0A3A1YEW6,UniRef:UniRef90_A0A142FY74;ec_number=4.2.1.1 contig_23 Pyrodigal gene 33227 33814 . - . ID=GCA008085315_01894_gene;locus_tag=GCA008085315_01894;gene=dolP contig_23 Pyrodigal CDS 33227 33814 . - 0 ID=GCA008085315_01894;Name=division/outer membrane stress-associated lipid-binding lipoprotein;locus_tag=GCA008085315_01894;product=division/outer membrane stress-associated lipid-binding lipoprotein;Dbxref=GO:0006970;gene=dolP;Parent=GCA008085315_01894_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2823,COG:M,KEGG:K04065,RefSeq:WP_005546451.1,SO:0001217,UniParc:UPI0001B9F251,UniRef:UniRef100_UPI0001B9F251,UniRef:UniRef50_P64596,UniRef:UniRef90_A0A5D0EP37 contig_23 Pyrodigal gene 33879 34463 . - . ID=GCA008085315_01895_gene;locus_tag=GCA008085315_01895;gene=gmhA contig_23 Pyrodigal CDS 33879 34463 . - 0 ID=GCA008085315_01895;Name=SIS domain-containing protein;locus_tag=GCA008085315_01895;product=SIS domain-containing protein;gene=gmhA;Parent=GCA008085315_01895_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0279,COG:G,RefSeq:WP_005546449.1,SO:0001217,UniParc:UPI0001B9F252,UniRef:UniRef100_UPI0001B9F252,UniRef:UniRef50_P52606,UniRef:UniRef90_A0A5D0EP57 contig_23 Pyrodigal gene 34476 34835 . - . ID=GCA008085315_01896_gene;locus_tag=GCA008085315_01896;gene=yraN contig_23 Pyrodigal CDS 34476 34835 . - 0 ID=GCA008085315_01896;Name=YraN family protein;locus_tag=GCA008085315_01896;product=YraN family protein;Dbxref=GO:0003676,GO:0004518;gene=yraN;Parent=GCA008085315_01896_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K07460,RefSeq:WP_005540160.1,SO:0001217,UniParc:UPI0001CA78CA,UniRef:UniRef100_A0A5D0KSG1,UniRef:UniRef50_P45300,UniRef:UniRef90_A0A5D0KSG1 contig_23 Pyrodigal gene 34845 36569 . - . ID=GCA008085315_01897_gene;locus_tag=GCA008085315_01897;gene=lpoA contig_23 Pyrodigal CDS 34845 36569 . - 0 ID=GCA008085315_01897;Name=Penicillin-binding protein activator LpoA;locus_tag=GCA008085315_01897;product=Penicillin-binding protein activator LpoA;gene=lpoA;Parent=GCA008085315_01897_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3107,COG:M,RefSeq:WP_005546444.1,SO:0001217,UniParc:UPI0001B9F254,UniRef:UniRef100_UPI0001B9F254,UniRef:UniRef50_Q65T15,UniRef:UniRef90_A0A5D0EP38 contig_23 Pyrodigal gene 36646 37494 . + . ID=GCA008085315_01898_gene;locus_tag=GCA008085315_01898;gene=rsmI contig_23 Pyrodigal CDS 36646 37494 . + 0 ID=GCA008085315_01898;Name=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;locus_tag=GCA008085315_01898;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;Dbxref=GO:0000451,GO:0008649,GO:0008757;gene=rsmI;Parent=GCA008085315_01898_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0313,COG:J,KEGG:K07056,RefSeq:WP_148321083.1,SO:0001217,UniParc:UPI0011D45D88,UniRef:UniRef100_UPI0011D45D88,UniRef:UniRef50_P67087,UniRef:UniRef90_E6KXD2;ec_number=2.1.1.198 contig_23 Pyrodigal gene 37764 39353 . + . ID=GCA008085315_01899_gene;locus_tag=GCA008085315_01899;gene=glpA contig_23 Pyrodigal CDS 37764 39353 . + 0 ID=GCA008085315_01899;Name=Aerobic glycerol-3-phosphate dehydrogenase;locus_tag=GCA008085315_01899;product=Aerobic glycerol-3-phosphate dehydrogenase;gene=glpA;Parent=GCA008085315_01899_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0578,KEGG:K00111,RefSeq:WP_005546440.1,SO:0001217,UniParc:UPI0001B9F256,UniRef:UniRef100_UPI0001B9F256,UniRef:UniRef50_A0A2H6EIV5,UniRef:UniRef90_A0A3S4PZ40;ec_number=1.1.5.3 contig_23 Pyrodigal gene 39530 40867 . + . ID=GCA008085315_01900_gene;locus_tag=GCA008085315_01900;gene=ndh contig_23 Pyrodigal CDS 39530 40867 . + 0 ID=GCA008085315_01900;Name=NADH dehydrogenase;locus_tag=GCA008085315_01900;product=NADH dehydrogenase;gene=ndh;Parent=GCA008085315_01900_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1252,RefSeq:WP_005546438.1,SO:0001217,UniParc:UPI0001B9F257,UniRef:UniRef100_UPI0001B9F257,UniRef:UniRef50_E6KXD6,UniRef:UniRef90_E6KXD6 contig_23 Pyrodigal gene 40970 41560 . - . ID=GCA008085315_01901_gene;locus_tag=GCA008085315_01901;gene=azoR contig_23 Pyrodigal CDS 40970 41560 . - 0 ID=GCA008085315_01901;Name=FMN dependent NADH:quinone oxidoreductase;locus_tag=GCA008085315_01901;product=FMN dependent NADH:quinone oxidoreductase;gene=azoR;Parent=GCA008085315_01901_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1182,KEGG:K01118,RefSeq:WP_148321082.1,SO:0001217,UniParc:UPI0011D38DB5,UniRef:UniRef100_UPI0011D38DB5,UniRef:UniRef50_P41407,UniRef:UniRef90_A0A142FY66;ec_number=1.7.1.17 contig_23 Pyrodigal gene 41753 42811 . + . ID=GCA008085315_01902_gene;locus_tag=GCA008085315_01902;gene=sohB contig_23 Pyrodigal CDS 41753 42811 . + 0 ID=GCA008085315_01902;Name=protease SohB;locus_tag=GCA008085315_01902;product=protease SohB;Dbxref=GO:0006508,GO:0008233;gene=sohB;Parent=GCA008085315_01902_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0616,COG:O,KEGG:K04774,RefSeq:WP_005546434.1,SO:0001217,UniParc:UPI0001B9F259,UniRef:UniRef100_UPI0001B9F259,UniRef:UniRef50_P57370,UniRef:UniRef90_A0A142FY65;ec_number=3.4.21.- contig_23 Pyrodigal gene 43001 43825 . + . ID=GCA008085315_01903_gene;locus_tag=GCA008085315_01903;gene=ompA contig_23 Pyrodigal CDS 43001 43825 . + 0 ID=GCA008085315_01903;Name=OmpA family protein;locus_tag=GCA008085315_01903;product=OmpA family protein;gene=ompA;Parent=GCA008085315_01903_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2885,COG:M,RefSeq:WP_005546431.1,SO:0001217,UniParc:UPI0001B9F25A,UniRef:UniRef100_UPI0001B9F25A,UniRef:UniRef50_A0A379EU49,UniRef:UniRef90_A0A5D0EP27 contig_23 Pyrodigal gene 43884 44759 . - . ID=GCA008085315_01904_gene;locus_tag=GCA008085315_01904;gene=fN3K contig_23 Pyrodigal CDS 43884 44759 . - 0 ID=GCA008085315_01904;Name=Fructosamine kinase;locus_tag=GCA008085315_01904;product=Fructosamine kinase;gene=fN3K;Parent=GCA008085315_01904_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3001,COG:G,RefSeq:WP_005546428.1,SO:0001217,UniParc:UPI0001B9F25B,UniRef:UniRef100_UPI0001B9F25B,UniRef:UniRef50_Q9CN56,UniRef:UniRef90_E6KXF0 contig_23 Pyrodigal gene 45000 46931 . + . ID=GCA008085315_01905_gene;locus_tag=GCA008085315_01905;gene=thrS contig_23 Pyrodigal CDS 45000 46931 . + 0 ID=GCA008085315_01905;Name=threonine--tRNA ligase;locus_tag=GCA008085315_01905;product=threonine--tRNA ligase;Dbxref=GO:0004829,GO:0005524,GO:0005737,GO:0006435;gene=thrS;Parent=GCA008085315_01905_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0441,COG:J,KEGG:K01868,RefSeq:WP_148333996.1,SO:0001217,UniParc:UPI0011D35A96,UniRef:UniRef100_UPI0011D35A96,UniRef:UniRef50_P0A8M3,UniRef:UniRef90_A0A5D0EGX8;ec_number=6.1.1.3 contig_23 Pyrodigal gene 47192 49060 . + . ID=GCA008085315_01906_gene;locus_tag=GCA008085315_01906 contig_23 Pyrodigal CDS 47192 49060 . + 0 ID=GCA008085315_01906;Name=site-specific DNA-methyltransferase;locus_tag=GCA008085315_01906;product=site-specific DNA-methyltransferase;Parent=GCA008085315_01906_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148321081.1,SO:0001217,UniParc:UPI0011D9EF5C,UniRef:UniRef100_UPI0011D9EF5C,UniRef:UniRef50_UPI0011D9EF5C,UniRef:UniRef90_UPI0011D9EF5C contig_23 Pyrodigal gene 49177 49956 . - . ID=GCA008085315_01907_gene;locus_tag=GCA008085315_01907;gene=fpr contig_23 Pyrodigal CDS 49177 49956 . - 0 ID=GCA008085315_01907;Name=ferredoxin--NADP(+) reductase;locus_tag=GCA008085315_01907;product=ferredoxin--NADP(+) reductase;gene=fpr;Parent=GCA008085315_01907_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1018,RefSeq:WP_005546417.1,SO:0001217,UniParc:UPI0001B9F2B1,UniRef:UniRef100_UPI0001B9F2B1,UniRef:UniRef50_E6KXF2,UniRef:UniRef90_A0A5D0EJH0 contig_23 Pyrodigal gene 50346 50810 . + . ID=GCA008085315_01908_gene;locus_tag=GCA008085315_01908;gene=infC contig_23 Pyrodigal CDS 50346 50810 . + 0 ID=GCA008085315_01908;Name=translation initiation factor IF-3;locus_tag=GCA008085315_01908;product=translation initiation factor IF-3;Dbxref=GO:0003743,GO:0006413;gene=infC;Parent=GCA008085315_01908_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_Q6F861,UniRef:UniRef90_A0A336N7Z2 contig_23 Pyrodigal gene 51034 51231 . + . ID=GCA008085315_01909_gene;locus_tag=GCA008085315_01909;gene=rpmI contig_23 Pyrodigal CDS 51034 51231 . + 0 ID=GCA008085315_01909;Name=50S ribosomal protein L35;locus_tag=GCA008085315_01909;product=50S ribosomal protein L35;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0022625;gene=rpmI;Parent=GCA008085315_01909_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0291,COG:J,KEGG:K02916,RefSeq:WP_005573011.1,SO:0001217,UniParc:UPI00022AE3AB,UniRef:UniRef100_UPI00022AE3AB,UniRef:UniRef50_Q65TP8,UniRef:UniRef90_Q65TP8 contig_23 Pyrodigal gene 51285 51638 . + . ID=GCA008085315_01910_gene;locus_tag=GCA008085315_01910;gene=rplT contig_23 Pyrodigal CDS 51285 51638 . + 0 ID=GCA008085315_01910;Name=50S ribosomal protein L20;locus_tag=GCA008085315_01910;product=50S ribosomal protein L20;Dbxref=GO:0000027,GO:0000315,GO:0003735,GO:0005840,GO:0006412,GO:0019843,GO:0022625,GO:1990904;gene=rplT;Parent=GCA008085315_01910_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0292,COG:J,RefSeq:WP_148321080.1,SO:0001217,UniParc:UPI0011D8259D,UniRef:UniRef100_UPI0011D8259D,UniRef:UniRef50_P44358,UniRef:UniRef90_P44358 contig_23 Pyrodigal gene 52979 53929 . + . ID=GCA008085315_01911_gene;locus_tag=GCA008085315_01911;gene=lacD contig_23 Pyrodigal CDS 52979 53929 . + 0 ID=GCA008085315_01911;Name=tagatose-bisphosphate aldolase;locus_tag=GCA008085315_01911;product=tagatose-bisphosphate aldolase;gene=lacD;Parent=GCA008085315_01911_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3684,COG:GP,KEGG:K01635,RefSeq:WP_005546404.1,SO:0001217,UniParc:UPI00022BFFCC,UniRef:UniRef100_UPI00022BFFCC,UniRef:UniRef50_P63703,UniRef:UniRef90_A0A5D0EHZ9;ec_number=4.1.2.40 contig_23 Pyrodigal gene 53947 54567 . + . ID=GCA008085315_01912_gene;locus_tag=GCA008085315_01912 contig_23 Pyrodigal CDS 53947 54567 . + 0 ID=GCA008085315_01912;Name=hypothetical protein;locus_tag=GCA008085315_01912;product=hypothetical protein;Parent=GCA008085315_01912_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=PFAM:PF08013.17,PFAM:PF00359.27 contig_23 Pyrodigal gene 54586 54870 . + . ID=GCA008085315_01913_gene;locus_tag=GCA008085315_01913;gene=gatB contig_23 Pyrodigal CDS 54586 54870 . + 0 ID=GCA008085315_01913;Name=PTS galactitol transporter subunit IIB;locus_tag=GCA008085315_01913;product=PTS galactitol transporter subunit IIB;gene=gatB;Parent=GCA008085315_01913_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005568327.1,SO:0001217,UniParc:UPI00022AC85D,UniRef:UniRef100_UPI00022AC85D,UniRef:UniRef50_P37188,UniRef:UniRef90_G4A7K4;ec_number=2.7.1.200 contig_23 Pyrodigal gene 54876 56240 . + . ID=GCA008085315_01914_gene;locus_tag=GCA008085315_01914 contig_23 Pyrodigal CDS 54876 56240 . + 0 ID=GCA008085315_01914;Name=PTS galactitol transporter subunit IIC;locus_tag=GCA008085315_01914;product=PTS galactitol transporter subunit IIC;Parent=GCA008085315_01914_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K02775,RefSeq:WP_148333997.1,SO:0001217,UniParc:UPI0011D4A21A,UniRef:UniRef100_UPI0011D4A21A,UniRef:UniRef50_A0A090S1W7,UniRef:UniRef90_UPI00197BED1A contig_23 Pyrodigal gene 56263 57306 . + . ID=GCA008085315_01915_gene;locus_tag=GCA008085315_01915;gene=gatD contig_23 Pyrodigal CDS 56263 57306 . + 0 ID=GCA008085315_01915;Name=galactitol-1-phosphate 5-dehydrogenase;locus_tag=GCA008085315_01915;product=galactitol-1-phosphate 5-dehydrogenase;Dbxref=GO:0008270,GO:0016491;gene=gatD;Parent=GCA008085315_01915_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1063,COG:ER,RefSeq:WP_148321078.1,SO:0001217,UniParc:UPI0011DA12C3,UniRef:UniRef100_UPI0011DA12C3,UniRef:UniRef50_A0A090SN38,UniRef:UniRef90_A0A5D0EID9;ec_number=1.1.1.251 contig_23 Pyrodigal gene 57372 58130 . + . ID=GCA008085315_01916_gene;locus_tag=GCA008085315_01916;gene=glpR contig_23 Pyrodigal CDS 57372 58130 . + 0 ID=GCA008085315_01916;Name=Transcriptional regulator;locus_tag=GCA008085315_01916;product=Transcriptional regulator;gene=glpR;Parent=GCA008085315_01916_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1349,COG:KG,KEGG:K02436,RefSeq:WP_005546397.1,SO:0001217,UniParc:UPI0001B9F2BA,UniRef:UniRef100_UPI0001B9F2BA,UniRef:UniRef50_A0A142G2U0,UniRef:UniRef90_A0A142G2U0 contig_23 Pyrodigal gene 58250 60100 . - . ID=GCA008085315_01917_gene;locus_tag=GCA008085315_01917;gene=dxs contig_23 Pyrodigal CDS 58250 60100 . - 0 ID=GCA008085315_01917;Name=1-deoxy-D-xylulose-5-phosphate synthase;locus_tag=GCA008085315_01917;product=1-deoxy-D-xylulose-5-phosphate synthase;Dbxref=GO:0005737,GO:0008615,GO:0008661,GO:0009228,GO:0009240;gene=dxs;Parent=GCA008085315_01917_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1154,COG:HI,KEGG:K01662,RefSeq:WP_005546395.1,SO:0001217,UniParc:UPI0001B9F2BB,UniRef:UniRef100_UPI0001B9F2BB,UniRef:UniRef50_Q9KGU7,UniRef:UniRef90_A0A448F9W2;ec_number=2.2.1.7 contig_23 Pyrodigal gene 60185 61075 . - . ID=GCA008085315_01918_gene;locus_tag=GCA008085315_01918;gene=ispA contig_23 Pyrodigal CDS 60185 61075 . - 0 ID=GCA008085315_01918;Name=(2E%2C6E)-farnesyl diphosphate synthase;locus_tag=GCA008085315_01918;product=(2E%2C6E)-farnesyl diphosphate synthase;Dbxref=GO:0008299;gene=ispA;Parent=GCA008085315_01918_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0142,COG:H,RefSeq:WP_148333998.1,SO:0001217,UniParc:UPI0011DA5CBA,UniRef:UniRef100_UPI0011DA5CBA,UniRef:UniRef50_P45204,UniRef:UniRef90_A0A5D0EKV6;ec_number=2.5.1.10 contig_23 Pyrodigal gene 61086 61331 . - . ID=GCA008085315_01919_gene;locus_tag=GCA008085315_01919;gene=xseB contig_23 Pyrodigal CDS 61086 61331 . - 0 ID=GCA008085315_01919;Name=exodeoxyribonuclease VII small subunit;locus_tag=GCA008085315_01919;product=exodeoxyribonuclease VII small subunit;gene=xseB;Parent=GCA008085315_01919_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1722,COG:L,RefSeq:WP_005546390.1,SO:0001217,UniParc:UPI0001B9F2BD,UniRef:UniRef100_G4A7L1,UniRef:UniRef50_P43914,UniRef:UniRef90_E6KXF9;ec_number=3.1.11.6 contig_23 Pyrodigal gene 61556 62452 . + . ID=GCA008085315_01920_gene;locus_tag=GCA008085315_01920;gene=accD contig_23 Pyrodigal CDS 61556 62452 . + 0 ID=GCA008085315_01920;Name=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;locus_tag=GCA008085315_01920;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;Dbxref=GO:0003989,GO:0006633,GO:0009317;gene=accD;Parent=GCA008085315_01920_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0777,COG:I,RefSeq:WP_005588913.1,SO:0001217,UniParc:UPI0001B9F2BE,UniRef:UniRef100_UPI0001B9F2BE,UniRef:UniRef50_A1WY04,UniRef:UniRef90_A0A142G2U4;ec_number=6.4.1.2 contig_23 Pyrodigal gene 62475 63821 . + . ID=GCA008085315_01921_gene;locus_tag=GCA008085315_01921;gene=folC contig_23 Pyrodigal CDS 62475 63821 . + 0 ID=GCA008085315_01921;Name=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;locus_tag=GCA008085315_01921;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;Dbxref=GO:0004326,GO:0005524,GO:0009396,GO:0016874;gene=folC;Parent=GCA008085315_01921_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0285,COG:H,RefSeq:WP_005575282.1,SO:0001217,UniParc:UPI0001B9F2BF,UniRef:UniRef100_UPI0001B9F2BF,UniRef:UniRef50_P43775,UniRef:UniRef90_A0A5D0EIY5;ec_number=6.3.2.17 contig_23 Pyrodigal gene 63878 64519 . - . ID=GCA008085315_01922_gene;locus_tag=GCA008085315_01922;gene=phoE contig_23 Pyrodigal CDS 63878 64519 . - 0 ID=GCA008085315_01922;Name=phosphoglycerate mutase (2%2C3-diphosphoglycerate-dependent);locus_tag=GCA008085315_01922;product=phosphoglycerate mutase (2%2C3-diphosphoglycerate-dependent);gene=phoE;Parent=GCA008085315_01922_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0406,COG:G,RefSeq:WP_005546384.1,SO:0001217,UniParc:UPI0001B9F2C0,UniRef:UniRef100_UPI0001B9F2C0,UniRef:UniRef50_A0A448F9Z7,UniRef:UniRef90_A0A142G2U6 contig_23 Pyrodigal gene 64581 66038 . - . ID=GCA008085315_01923_gene;locus_tag=GCA008085315_01923;gene=cls contig_23 Pyrodigal CDS 64581 66038 . - 0 ID=GCA008085315_01923;Name=cardiolipin synthase;locus_tag=GCA008085315_01923;product=cardiolipin synthase;Dbxref=GO:0008808,GO:0016780,GO:0032049;gene=cls;Parent=GCA008085315_01923_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1502,COG:I,KEGG:K06131,RefSeq:WP_005546382.1,SO:0001217,UniParc:UPI00022AC863,UniRef:UniRef100_UPI00022AC863,UniRef:UniRef50_Q65TD2,UniRef:UniRef90_E6KXG4;ec_number=2.7.8.- contig_23 Pyrodigal gene 66052 66960 . - . ID=GCA008085315_01924_gene;locus_tag=GCA008085315_01924;gene=lysO contig_23 Pyrodigal CDS 66052 66960 . - 0 ID=GCA008085315_01924;Name=Lysine exporter LysO family protein;locus_tag=GCA008085315_01924;product=Lysine exporter LysO family protein;gene=lysO;Parent=GCA008085315_01924_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2431,COG:E,RefSeq:WP_148333999.1,SO:0001217,UniParc:UPI0011D53BBF,UniRef:UniRef100_UPI0011D53BBF,UniRef:UniRef50_Q9CNG6,UniRef:UniRef90_A0A5D0EHU6 contig_23 Pyrodigal gene 67091 67396 . + . ID=GCA008085315_01925_gene;locus_tag=GCA008085315_01925 contig_23 Pyrodigal CDS 67091 67396 . + 0 ID=GCA008085315_01925;Name=hypothetical protein;locus_tag=GCA008085315_01925;product=hypothetical protein;Parent=GCA008085315_01925_gene;inference=ab initio prediction:Pyrodigal:3.5 contig_23 Pyrodigal gene 67398 67769 . + . ID=GCA008085315_01926_gene;locus_tag=GCA008085315_01926 contig_23 Pyrodigal CDS 67398 67769 . + 0 ID=GCA008085315_01926;Name=Pseudouridine synthase RsuA/RluA-like domain-containing protein;locus_tag=GCA008085315_01926;product=Pseudouridine synthase RsuA/RluA-like domain-containing protein;Parent=GCA008085315_01926_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A382XE22 contig_23 Pyrodigal gene 67814 68677 . + . ID=GCA008085315_01927_gene;locus_tag=GCA008085315_01927;gene=rhaT contig_23 Pyrodigal CDS 67814 68677 . + 0 ID=GCA008085315_01927;Name=Putative membrane protein;locus_tag=GCA008085315_01927;product=Putative membrane protein;gene=rhaT;Parent=GCA008085315_01927_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0697,COG:GER,RefSeq:WP_005559623.1,SO:0001217,UniParc:UPI00022AD6AC,UniRef:UniRef100_UPI00022AD6AC,UniRef:UniRef50_E6KXG7,UniRef:UniRef90_U1R0K2 contig_23 Pyrodigal gene 68760 69083 . + . ID=GCA008085315_01928_gene;locus_tag=GCA008085315_01928 contig_23 Pyrodigal CDS 68760 69083 . + 0 ID=GCA008085315_01928;Name=Alkylphosphonate utilization protein;locus_tag=GCA008085315_01928;product=Alkylphosphonate utilization protein;Parent=GCA008085315_01928_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005546369.1,SO:0001217,UniParc:UPI0001B9F2C6,UniRef:UniRef100_UPI0001B9F2C6,UniRef:UniRef50_P44479,UniRef:UniRef90_A0A1V3TM53 contig_23 Pyrodigal gene 69134 70831 . - . ID=GCA008085315_01929_gene;locus_tag=GCA008085315_01929 contig_23 Pyrodigal CDS 69134 70831 . - 0 ID=GCA008085315_01929;Name=P-loop NTPase fold protein;locus_tag=GCA008085315_01929;product=P-loop NTPase fold protein;Parent=GCA008085315_01929_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_233441356.1,SO:0001217,UniParc:UPI001F30D70E,UniRef:UniRef100_UPI001F30D70E,UniRef:UniRef50_UPI001EF6F05D,UniRef:UniRef90_UPI001F286828 contig_23 Pyrodigal gene 71243 71668 . + . ID=GCA008085315_01930_gene;locus_tag=GCA008085315_01930 contig_23 Pyrodigal CDS 71243 71668 . + 0 ID=GCA008085315_01930;Name=DNA-binding protein;locus_tag=GCA008085315_01930;product=DNA-binding protein;Parent=GCA008085315_01930_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005590791.1,SO:0001217,UniParc:UPI0002ABA22C,UniRef:UniRef100_UPI0002ABA22C,UniRef:UniRef50_A0A1V3TUY0,UniRef:UniRef90_UPI0011DCF5E3 contig_23 Pyrodigal gene 71682 71882 . + . ID=GCA008085315_01931_gene;locus_tag=GCA008085315_01931 contig_23 Pyrodigal CDS 71682 71882 . + 0 ID=GCA008085315_01931;Name=hypothetical protein;locus_tag=GCA008085315_01931;product=hypothetical protein;Parent=GCA008085315_01931_gene;inference=ab initio prediction:Pyrodigal:3.5 contig_23 Pyrodigal gene 72296 73837 . + . ID=GCA008085315_01932_gene;locus_tag=GCA008085315_01932 contig_23 Pyrodigal CDS 72296 73837 . + 0 ID=GCA008085315_01932;Name=subtype B tannase;locus_tag=GCA008085315_01932;product=subtype B tannase;Dbxref=GO:0050318;Parent=GCA008085315_01932_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005545415.1,SO:0001217,UniParc:UPI0001B9F2CB,UniRef:UniRef100_UPI0001B9F2CB,UniRef:UniRef50_D2ZY62,UniRef:UniRef90_A0A5D0EW58 contig_23 Pyrodigal gene 74110 75483 . - . ID=GCA008085315_01933_gene;locus_tag=GCA008085315_01933;gene=tdeA contig_23 Pyrodigal CDS 74110 75483 . - 0 ID=GCA008085315_01933;Name=toxin/drug exporter TdeA;locus_tag=GCA008085315_01933;product=toxin/drug exporter TdeA;Dbxref=GO:0006811,GO:0009279,GO:0015288,GO:0015562,GO:0046677,GO:0046930;gene=tdeA;Parent=GCA008085315_01933_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1538,COG:M,RefSeq:WP_005545419.1,SO:0001217,UniParc:UPI00006AB5BA,UniRef:UniRef100_Q2EHL7,UniRef:UniRef50_Q2EHL7,UniRef:UniRef90_Q2EHL7 contig_23 Pyrodigal gene 75560 77494 . - . ID=GCA008085315_01934_gene;locus_tag=GCA008085315_01934;gene=macB contig_23 Pyrodigal CDS 75560 77494 . - 0 ID=GCA008085315_01934;Name=Macrolide export ATP-binding/permease protein MacB;locus_tag=GCA008085315_01934;product=Macrolide export ATP-binding/permease protein MacB;Dbxref=GO:0005524,GO:0005886,GO:0016887,GO:0022857,GO:0046677;gene=macB;Parent=GCA008085315_01934_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1136,COG:M,RefSeq:WP_005545422.1,SO:0001217,UniParc:UPI0001B9F2CD,UniRef:UniRef100_UPI0001B9F2CD,UniRef:UniRef50_Q2EHL8,UniRef:UniRef90_Q2EHL8;ec_number=7.6.2.- contig_23 Pyrodigal gene 77514 78698 . - . ID=GCA008085315_01935_gene;locus_tag=GCA008085315_01935;gene=macA contig_23 Pyrodigal CDS 77514 78698 . - 0 ID=GCA008085315_01935;Name=Putative MacA;locus_tag=GCA008085315_01935;product=Putative MacA;gene=macA;Parent=GCA008085315_01935_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0845,COG:MV,KEGG:K13888,RefSeq:WP_005545424.1,SO:0001217,UniParc:UPI0001B9F2CE,UniRef:UniRef100_UPI0001B9F2CE,UniRef:UniRef50_Q2EHL9,UniRef:UniRef90_Q2EHL9 contig_23 Pyrodigal gene 78920 80590 . + . ID=GCA008085315_01936_gene;locus_tag=GCA008085315_01936;gene=glnS contig_23 Pyrodigal CDS 78920 80590 . + 0 ID=GCA008085315_01936;Name=glutamine--tRNA ligase;locus_tag=GCA008085315_01936;product=glutamine--tRNA ligase;Dbxref=GO:0000166,GO:0004819,GO:0005524,GO:0005737,GO:0005829,GO:0006424,GO:0006425;gene=glnS;Parent=GCA008085315_01936_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0008,COG:J,KEGG:K01886,RefSeq:WP_005545425.1,SO:0001217,UniParc:UPI00022C00BF,UniRef:UniRef100_UPI0001B9F2CF,UniRef:UniRef50_P00962,UniRef:UniRef90_P43831;ec_number=6.1.1.18 contig_23 Pyrodigal gene 80662 81096 . + . ID=GCA008085315_01937_gene;locus_tag=GCA008085315_01937;gene=ycgN contig_23 Pyrodigal CDS 80662 81096 . + 0 ID=GCA008085315_01937;Name=YcgN family cysteine cluster protein;locus_tag=GCA008085315_01937;product=YcgN family cysteine cluster protein;gene=ycgN;Parent=GCA008085315_01937_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2983,COG:R,RefSeq:WP_148321100.1,SO:0001217,UniParc:UPI0011D3B6A5,UniRef:UniRef100_UPI0011D3B6A5,UniRef:UniRef50_Q9CN96,UniRef:UniRef90_G4A7M9 contig_23 Pyrodigal gene 81196 81756 . + . ID=GCA008085315_01938_gene;locus_tag=GCA008085315_01938 contig_23 Pyrodigal CDS 81196 81756 . + 0 ID=GCA008085315_01938;Name=4-alpha-glucanotransferase;locus_tag=GCA008085315_01938;product=4-alpha-glucanotransferase;Parent=GCA008085315_01938_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005545429.1,SO:0001217,UniParc:UPI0001B9F2D1,UniRef:UniRef100_UPI0001B9F2D1,UniRef:UniRef50_A0A142FXE3,UniRef:UniRef90_A0A142FXE3 contig_23 Pyrodigal gene 81753 83948 . + . ID=GCA008085315_01939_gene;locus_tag=GCA008085315_01939;gene=glgB contig_23 Pyrodigal CDS 81753 83948 . + 0 ID=GCA008085315_01939;Name=1%2C4-alpha-glucan branching protein GlgB;locus_tag=GCA008085315_01939;product=1%2C4-alpha-glucan branching protein GlgB;Dbxref=GO:0003844,GO:0004553,GO:0005975,GO:0005978,GO:0043169;gene=glgB;Parent=GCA008085315_01939_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0296,COG:G,KEGG:K00700,RefSeq:WP_148334000.1,SO:0001217,UniParc:UPI0011D722BF,UniRef:UniRef100_UPI0011D722BF,UniRef:UniRef50_Q8GQC5,UniRef:UniRef90_E6KXM0;ec_number=2.4.1.18 contig_23 Pyrodigal gene 83945 85954 . + . ID=GCA008085315_01940_gene;locus_tag=GCA008085315_01940;gene=glgX contig_23 Pyrodigal CDS 83945 85954 . + 0 ID=GCA008085315_01940;Name=glycogen debranching protein GlgX;locus_tag=GCA008085315_01940;product=glycogen debranching protein GlgX;Dbxref=GO:0004133,GO:0004553,GO:0005980;gene=glgX;Parent=GCA008085315_01940_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1523,COG:G,KEGG:K01214,RefSeq:WP_005545432.1,SO:0001217,UniParc:UPI0001B9F2D3,UniRef:UniRef100_UPI0001B9F2D3,UniRef:UniRef50_P45178,UniRef:UniRef90_A0A5D0EMM3;ec_number=3.2.1.68 contig_23 Pyrodigal gene 85981 87291 . + . ID=GCA008085315_01941_gene;locus_tag=GCA008085315_01941;gene=glgC contig_23 Pyrodigal CDS 85981 87291 . + 0 ID=GCA008085315_01941;Name=glucose-1-phosphate adenylyltransferase;locus_tag=GCA008085315_01941;product=glucose-1-phosphate adenylyltransferase;Dbxref=GO:0005978,GO:0008878;gene=glgC;Parent=GCA008085315_01941_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0448,COG:G,KEGG:K00975,RefSeq:WP_148321098.1,SO:0001217,UniParc:UPI0011D8CA6D,UniRef:UniRef100_UPI0011D8CA6D,UniRef:UniRef50_P43796,UniRef:UniRef90_A0A142FXE0;ec_number=2.7.7.27 contig_23 Pyrodigal gene 87493 88932 . + . ID=GCA008085315_01942_gene;locus_tag=GCA008085315_01942;gene=glgA contig_23 Pyrodigal CDS 87493 88932 . + 0 ID=GCA008085315_01942;Name=glycogen synthase GlgA;locus_tag=GCA008085315_01942;product=glycogen synthase GlgA;Dbxref=GO:0004373;gene=glgA;Parent=GCA008085315_01942_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0297,COG:G,RefSeq:WP_005545436.1,SO:0001217,UniParc:UPI0001B9F2D5,UniRef:UniRef100_UPI0001B9F2D5,UniRef:UniRef50_Q8ZA78,UniRef:UniRef90_A0A5D0EMM4;ec_number=2.4.1.21 contig_23 Pyrodigal gene 89056 91521 . + . ID=GCA008085315_01943_gene;locus_tag=GCA008085315_01943;gene=glgP contig_23 Pyrodigal CDS 89056 91521 . + 0 ID=GCA008085315_01943;Name=Alpha-1%2C4 glucan phosphorylase;locus_tag=GCA008085315_01943;product=Alpha-1%2C4 glucan phosphorylase;gene=glgP;Parent=GCA008085315_01943_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0058,COG:G,RefSeq:WP_005589179.1,SO:0001217,UniParc:UPI0002AC216B,UniRef:UniRef100_UPI0002AC216B,UniRef:UniRef50_P45180,UniRef:UniRef90_E6KXM4 contig_23 Pyrodigal gene 91640 92245 . - . ID=GCA008085315_01944_gene;locus_tag=GCA008085315_01944;gene=dedA contig_23 Pyrodigal CDS 91640 92245 . - 0 ID=GCA008085315_01944;Name=DedA family protein;locus_tag=GCA008085315_01944;product=DedA family protein;gene=dedA;Parent=GCA008085315_01944_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0586,COG:M,KEGG:K03975,RefSeq:WP_005538859.1,SO:0001217,UniParc:UPI0001B9F348,UniRef:UniRef100_A0A5D0EML6,UniRef:UniRef50_A0A0A2Y122,UniRef:UniRef90_A0A5D0EML6 contig_23 Pyrodigal gene 92459 92746 . + . ID=GCA008085315_01945_gene;locus_tag=GCA008085315_01945;gene=rplY contig_23 Pyrodigal CDS 92459 92746 . + 0 ID=GCA008085315_01945;Name=50S ribosomal protein L25;locus_tag=GCA008085315_01945;product=50S ribosomal protein L25;Dbxref=GO:0003735,GO:0005840,GO:0006412,GO:0008097,GO:0022625;gene=rplY;Parent=GCA008085315_01945_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1825,COG:J,KEGG:K02897,RefSeq:WP_005538860.1,SO:0001217,UniParc:UPI0001B9F349,UniRef:UniRef100_A0A142FXD6,UniRef:UniRef50_Q6LRY1,UniRef:UniRef90_Q9CN10 contig_23 Pyrodigal gene 92895 93497 . + . ID=GCA008085315_01946_gene;locus_tag=GCA008085315_01946;gene=hlpB contig_23 Pyrodigal CDS 92895 93497 . + 0 ID=GCA008085315_01946;Name=Lipoprotein HlpB;locus_tag=GCA008085315_01946;product=Lipoprotein HlpB;gene=hlpB;Parent=GCA008085315_01946_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005545441.1,SO:0001217,UniParc:UPI0001B9F34A,UniRef:UniRef100_UPI0001B9F34A,UniRef:UniRef50_A0A1V3K0L2,UniRef:UniRef90_A0A5D0KU42 contig_23 Pyrodigal gene 93720 94550 . + . ID=GCA008085315_01947_gene;locus_tag=GCA008085315_01947;gene=dacC contig_23 Pyrodigal CDS 93720 94550 . + 0 ID=GCA008085315_01947;Name=DacC protein;locus_tag=GCA008085315_01947;product=DacC protein;gene=dacC;Parent=GCA008085315_01947_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1686,COG:M,SO:0001217,UniRef:UniRef50_P44664,UniRef:UniRef90_G4A7N9 contig_23 Pyrodigal gene 94730 96058 . + . ID=GCA008085315_01948_gene;locus_tag=GCA008085315_01948;gene=mukF contig_23 Pyrodigal CDS 94730 96058 . + 0 ID=GCA008085315_01948;Name=chromosome partition protein MukF;locus_tag=GCA008085315_01948;product=chromosome partition protein MukF;Dbxref=GO:0005509,GO:0007059;gene=mukF;Parent=GCA008085315_01948_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3006,COG:D,KEGG:K03633,RefSeq:WP_005545444.1,SO:0001217,UniParc:UPI0001B9F34C,UniRef:UniRef100_UPI0001B9F34C,UniRef:UniRef50_P45185,UniRef:UniRef90_E6KXN2 contig_23 Infernal gene 96099 96192 . - . ID=GCA008085315_01949_gene;locus_tag=GCA008085315_01949;gene=AaHKsRNA22 contig_23 Infernal ncRNA 96099 96192 5e-11 - . ID=GCA008085315_01949;Name=Aggregatibacter sRNA 22;locus_tag=GCA008085315_01949;product=Aggregatibacter sRNA 22;Dbxref=RFAM:RF02902;Parent=GCA008085315_01949_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02902 contig_23 Pyrodigal gene 96229 99504 . + . ID=GCA008085315_01950_gene;locus_tag=GCA008085315_01950;gene=fucP contig_23 Pyrodigal CDS 96229 99504 . + 0 ID=GCA008085315_01950;Name=acyl-[ACP]--phospholipid O-acyltransferase;locus_tag=GCA008085315_01950;product=acyl-[ACP]--phospholipid O-acyltransferase;gene=fucP;Parent=GCA008085315_01950_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0738,COG:G,SO:0001217,UniRef:UniRef50_A7ZBJ9,UniRef:UniRef90_A0A3S4QBT8 contig_23 Pyrodigal gene 99444 99683 . + . ID=GCA008085315_01951_gene;locus_tag=GCA008085315_01951 contig_23 Pyrodigal CDS 99444 99683 . + 0 ID=GCA008085315_01951;Name=hypothetical protein;locus_tag=GCA008085315_01951;product=hypothetical protein;Parent=GCA008085315_01951_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=PFAM:PF13193.12 contig_23 Pyrodigal gene 99704 100444 . + . ID=GCA008085315_01952_gene;locus_tag=GCA008085315_01952;gene=mukE contig_23 Pyrodigal CDS 99704 100444 . + 0 ID=GCA008085315_01952;Name=chromosome partition protein MukE;locus_tag=GCA008085315_01952;product=chromosome partition protein MukE;Dbxref=GO:0007059,GO:0030261;gene=mukE;Parent=GCA008085315_01952_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3095,COG:D,RefSeq:WP_005545450.1,SO:0001217,UniParc:UPI0001B9F34F,UniRef:UniRef100_UPI0001B9F34F,UniRef:UniRef50_P22524,UniRef:UniRef90_A0A142FXD1 contig_23 Pyrodigal gene 100444 104934 . + . ID=GCA008085315_01953_gene;locus_tag=GCA008085315_01953;gene=mukB contig_23 Pyrodigal CDS 100444 104934 . + 0 ID=GCA008085315_01953;Name=chromosome partition protein MukB;locus_tag=GCA008085315_01953;product=chromosome partition protein MukB;Dbxref=GO:0003677,GO:0005524,GO:0005737,GO:0006260,GO:0007059,GO:0009295,GO:0030261,GO:0051301;gene=mukB;Parent=GCA008085315_01953_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3096,COG:D,KEGG:K03632,RefSeq:WP_005545451.1,SO:0001217,UniParc:UPI0001B9F350,UniRef:UniRef100_UPI0001B9F350,UniRef:UniRef50_P22523,UniRef:UniRef90_Q93IE8 contig_23 Pyrodigal gene 105010 105882 . + . ID=GCA008085315_01954_gene;locus_tag=GCA008085315_01954;gene=eamA contig_23 Pyrodigal CDS 105010 105882 . + 0 ID=GCA008085315_01954;Name=EamA domain-containing protein;locus_tag=GCA008085315_01954;product=EamA domain-containing protein;gene=eamA;Parent=GCA008085315_01954_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005545453.1,SO:0001217,UniParc:UPI0001B9F351,UniRef:UniRef100_UPI0001B9F351,UniRef:UniRef50_P44170,UniRef:UniRef90_A0AAP7GWJ2 contig_23 Pyrodigal gene 105897 107321 . + . ID=GCA008085315_01955_gene;locus_tag=GCA008085315_01955;gene=sbcB contig_23 Pyrodigal CDS 105897 107321 . + 0 ID=GCA008085315_01955;Name=exodeoxyribonuclease I;locus_tag=GCA008085315_01955;product=exodeoxyribonuclease I;Dbxref=GO:0000175,GO:0003676,GO:0006281,GO:0008310;gene=sbcB;Parent=GCA008085315_01955_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2925,COG:L,KEGG:K01141,RefSeq:WP_187370267.1,SO:0001217,UniParc:UPI0016524756,UniRef:UniRef100_UPI0011D8202E,UniRef:UniRef50_P45188,UniRef:UniRef90_A0A5D0EML2;ec_number=3.1.11.1 ##sequence-region contig_24 1 104099 contig_24 Bakta region 1 104099 . + . ID=contig_24;Name=contig_24 contig_24 Pyrodigal gene 1321 1956 . + . ID=GCA008085315_01956_gene;locus_tag=GCA008085315_01956;gene=tfoX contig_24 Pyrodigal CDS 1321 1956 . + 0 ID=GCA008085315_01956;Name=DNA transformation protein;locus_tag=GCA008085315_01956;product=DNA transformation protein;gene=tfoX;Parent=GCA008085315_01956_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3070,COG:K,RefSeq:WP_005548057.1,SO:0001217,UniParc:UPI0001B9F5F3,UniRef:UniRef100_UPI0001B9F5F3,UniRef:UniRef50_A0A5D0EK75,UniRef:UniRef90_A0A5D0EK75 contig_24 Pyrodigal gene 2027 2875 . - . ID=GCA008085315_01957_gene;locus_tag=GCA008085315_01957;gene=rpoH contig_24 Pyrodigal CDS 2027 2875 . - 0 ID=GCA008085315_01957;Name=RNA polymerase sigma factor RpoH;locus_tag=GCA008085315_01957;product=RNA polymerase sigma factor RpoH;Dbxref=GO:0003700,GO:0006352,GO:0006355,GO:0016987;gene=rpoH;Parent=GCA008085315_01957_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0568,COG:K,KEGG:K03089,RefSeq:WP_005548059.1,SO:0001217,UniParc:UPI0001B9F5F2,UniRef:UniRef100_UPI0001B9F5F2,UniRef:UniRef50_P50511,UniRef:UniRef90_C9PP84 contig_24 Pyrodigal gene 3060 3374 . - . ID=GCA008085315_01958_gene;locus_tag=GCA008085315_01958 contig_24 Pyrodigal CDS 3060 3374 . - 0 ID=GCA008085315_01958;Name=RNA polymerase factor sigma-32;locus_tag=GCA008085315_01958;product=RNA polymerase factor sigma-32;Parent=GCA008085315_01958_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4390,COG:S,RefSeq:WP_005548062.1,SO:0001217,UniParc:UPI0001B9F5F1,UniRef:UniRef100_UPI0001B9F5F1,UniRef:UniRef50_A0A0H3PF56,UniRef:UniRef90_G4A8U4 contig_24 Pyrodigal gene 3390 4415 . - . ID=GCA008085315_01959_gene;locus_tag=GCA008085315_01959;gene=murB contig_24 Pyrodigal CDS 3390 4415 . - 0 ID=GCA008085315_01959;Name=UDP-N-acetylmuramate dehydrogenase;locus_tag=GCA008085315_01959;product=UDP-N-acetylmuramate dehydrogenase;Dbxref=GO:0008762,GO:0071949;gene=murB;Parent=GCA008085315_01959_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0812,COG:M,RefSeq:WP_148321029.1,SO:0001217,UniParc:UPI0011D419F4,UniRef:UniRef100_UPI0011D419F4,UniRef:UniRef50_P08373,UniRef:UniRef90_A0A5D0EJC6;ec_number=1.3.1.98 contig_24 Pyrodigal gene 4430 6133 . - . ID=GCA008085315_01960_gene;locus_tag=GCA008085315_01960;gene=narQ contig_24 Pyrodigal CDS 4430 6133 . - 0 ID=GCA008085315_01960;Name=nitrate/nitrite two-component system sensor histidine kinase NarQ;locus_tag=GCA008085315_01960;product=nitrate/nitrite two-component system sensor histidine kinase NarQ;Dbxref=GO:0000155,GO:0000160,GO:0016020,GO:0046983;gene=narQ;Parent=GCA008085315_01960_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3850,COG:T,KEGG:K07674,RefSeq:WP_005548066.1,SO:0001217,UniParc:UPI0001B9F5EF,UniRef:UniRef100_UPI0001B9F5EF,UniRef:UniRef50_P44604,UniRef:UniRef90_A0A5D0EJD0;ec_number=2.7.13.3 contig_24 Pyrodigal gene 6410 6694 . + . ID=GCA008085315_01961_gene;locus_tag=GCA008085315_01961;gene=napD contig_24 Pyrodigal CDS 6410 6694 . + 0 ID=GCA008085315_01961;Name=Chaperone NapD;locus_tag=GCA008085315_01961;product=Chaperone NapD;gene=napD;Parent=GCA008085315_01961_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3062,COG:O,KEGG:K02570,RefSeq:WP_005548070.1,SO:0001217,UniParc:UPI0001B9F5ED,UniRef:UniRef100_UPI0001B9F5ED,UniRef:UniRef50_A0A5D0EK86,UniRef:UniRef90_A0A5D0EK86 contig_24 Pyrodigal gene 6728 9214 . + . ID=GCA008085315_01962_gene;locus_tag=GCA008085315_01962;gene=napA contig_24 Pyrodigal CDS 6728 9214 . + 0 ID=GCA008085315_01962;Name=nitrate reductase catalytic subunit NapA;locus_tag=GCA008085315_01962;product=nitrate reductase catalytic subunit NapA;Dbxref=GO:0005506,GO:0006777,GO:0008940,GO:0009055,GO:0009325,GO:0016020,GO:0030151,GO:0042128,GO:0042597,GO:0043546,GO:0045333,GO:0050140,GO:0051539;gene=napA;Parent=GCA008085315_01962_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0243,KEGG:K02567,RefSeq:WP_148321028.1,SO:0001217,UniParc:UPI0011D94241,UniRef:UniRef100_UPI0011D94241,UniRef:UniRef50_P33937,UniRef:UniRef90_Q8VL02;ec_number=1.9.6.1 contig_24 Pyrodigal gene 9286 10101 . + . ID=GCA008085315_01963_gene;locus_tag=GCA008085315_01963;gene=napG contig_24 Pyrodigal CDS 9286 10101 . + 0 ID=GCA008085315_01963;Name=ferredoxin-type protein NapG;locus_tag=GCA008085315_01963;product=ferredoxin-type protein NapG;gene=napG;Parent=GCA008085315_01963_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG1143,RefSeq:WP_005585478.1,SO:0001217,UniParc:UPI0002ABB442,UniRef:UniRef100_UPI0002ABB442,UniRef:UniRef50_P44652,UniRef:UniRef90_A0A5D0EMC3;ec_number=7.1.1.- contig_24 Pyrodigal gene 10101 10982 . + . ID=GCA008085315_01964_gene;locus_tag=GCA008085315_01964;gene=napH contig_24 Pyrodigal CDS 10101 10982 . + 0 ID=GCA008085315_01964;Name=quinol dehydrogenase ferredoxin subunit NapH;locus_tag=GCA008085315_01964;product=quinol dehydrogenase ferredoxin subunit NapH;gene=napH;Parent=GCA008085315_01964_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0348,RefSeq:WP_005548076.1,SO:0001217,UniParc:UPI00022AC36D,UniRef:UniRef100_UPI00022AC36D,UniRef:UniRef50_P33934,UniRef:UniRef90_A0A5D0ELJ7;ec_number=7.1.1.- contig_24 Pyrodigal gene 11020 11469 . + . ID=GCA008085315_01965_gene;locus_tag=GCA008085315_01965;gene=napB contig_24 Pyrodigal CDS 11020 11469 . + 0 ID=GCA008085315_01965;Name=Periplasmic nitrate reductase%2C electron transfer subunit;locus_tag=GCA008085315_01965;product=Periplasmic nitrate reductase%2C electron transfer subunit;gene=napB;Parent=GCA008085315_01965_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3043,COG:CP,RefSeq:WP_005548078.1,SO:0001217,UniParc:UPI0001B9F57B,UniRef:UniRef100_UPI0001B9F57B,UniRef:UniRef50_P44654,UniRef:UniRef90_A0A5D0ELP6 contig_24 Pyrodigal gene 11483 12118 . + . ID=GCA008085315_01966_gene;locus_tag=GCA008085315_01966;gene=napC contig_24 Pyrodigal CDS 11483 12118 . + 0 ID=GCA008085315_01966;Name=Cytochrome c-type protein;locus_tag=GCA008085315_01966;product=Cytochrome c-type protein;gene=napC;Parent=GCA008085315_01966_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG3005,RefSeq:WP_005548080.1,SO:0001217,UniParc:UPI0001B9F57A,UniRef:UniRef100_UPI0001B9F57A,UniRef:UniRef50_P44655,UniRef:UniRef90_E6L0B4 contig_24 Pyrodigal gene 12204 14099 . - . ID=GCA008085315_01967_gene;locus_tag=GCA008085315_01967;gene=gss contig_24 Pyrodigal CDS 12204 14099 . - 0 ID=GCA008085315_01967;Name=bifunctional glutathionylspermidine amidase/synthase;locus_tag=GCA008085315_01967;product=bifunctional glutathionylspermidine amidase/synthase;gene=gss;Parent=GCA008085315_01967_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0754,COG:E,KEGG:K01460,RefSeq:WP_148321027.1,SO:0001217,UniParc:UPI0011D974B2,UniRef:UniRef100_UPI0011D974B2,UniRef:UniRef50_P0AES0,UniRef:UniRef90_E6L0B3;ec_number=6.3.1.8 contig_24 Pyrodigal gene 14217 15260 . - . ID=GCA008085315_01968_gene;locus_tag=GCA008085315_01968;gene=waaF contig_24 Pyrodigal CDS 14217 15260 . - 0 ID=GCA008085315_01968;Name=lipopolysaccharide heptosyltransferase II;locus_tag=GCA008085315_01968;product=lipopolysaccharide heptosyltransferase II;Dbxref=GO:0008920,GO:0009103,GO:0016757;gene=waaF;Parent=GCA008085315_01968_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0859,COG:M,KEGG:K02843,RefSeq:WP_005548084.1,SO:0001217,UniParc:UPI0001B9F578,UniRef:UniRef100_UPI0001B9F578,UniRef:UniRef50_Q7VNA4,UniRef:UniRef90_A0A5D0EJM1;ec_number=2.4.99.24 contig_24 Pyrodigal gene 15280 16407 . - . ID=GCA008085315_01969_gene;locus_tag=GCA008085315_01969 contig_24 Pyrodigal CDS 15280 16407 . - 0 ID=GCA008085315_01969;Name=Cell filamentation protein Fic;locus_tag=GCA008085315_01969;product=Cell filamentation protein Fic;Parent=GCA008085315_01969_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3177,COG:K,RefSeq:WP_005548086.1,SO:0001217,UniParc:UPI0001B9F577,UniRef:UniRef100_UPI0001B9F577,UniRef:UniRef50_A0A2N4XDI1,UniRef:UniRef90_A0A5D0EJD7 contig_24 Pyrodigal gene 16577 17503 . - . ID=GCA008085315_01970_gene;locus_tag=GCA008085315_01970;gene=rfaD contig_24 Pyrodigal CDS 16577 17503 . - 0 ID=GCA008085315_01970;Name=ADP-L-glycero-D-mannoheptose-6-epimerase;locus_tag=GCA008085315_01970;product=ADP-L-glycero-D-mannoheptose-6-epimerase;Dbxref=GO:0005975,GO:0008712,GO:0050661,GO:0097171;gene=rfaD;Parent=GCA008085315_01970_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0451,COG:M,KEGG:K03274,RefSeq:WP_005566984.1,SO:0001217,UniParc:UPI00022AC713,UniRef:UniRef100_UPI0011D383FE,UniRef:UniRef50_Q7VZF5,UniRef:UniRef90_P45048,VFDB:VFC0258,VFDB:VFG000332;ec_number=5.1.3.20 contig_24 Pyrodigal gene 17782 18558 . + . ID=GCA008085315_01971_gene;locus_tag=GCA008085315_01971 contig_24 Pyrodigal CDS 17782 18558 . + 0 ID=GCA008085315_01971;Name=putative protein HI_0205;locus_tag=GCA008085315_01971;product=putative protein HI_0205;Parent=GCA008085315_01971_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005548092.1,SO:0001217,UniParc:UPI0001B9F574,UniRef:UniRef100_UPI0001B9F574,UniRef:UniRef50_P43963,UniRef:UniRef90_A0A5D0EK92 contig_24 Pyrodigal gene 18585 20399 . + . ID=GCA008085315_01972_gene;locus_tag=GCA008085315_01972;gene=nadN contig_24 Pyrodigal CDS 18585 20399 . + 0 ID=GCA008085315_01972;Name=NAD nucleotidase;locus_tag=GCA008085315_01972;product=NAD nucleotidase;Dbxref=GO:0000210,GO:0008253,GO:0009166;gene=nadN;Parent=GCA008085315_01972_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0737,COG:FV,RefSeq:WP_005538478.1,SO:0001217,UniParc:UPI0001B9F573,UniRef:UniRef100_A0A5D0EKF7,UniRef:UniRef50_P44569,UniRef:UniRef90_A0A3S4PT97;ec_number=3.1.3.5 contig_24 Pyrodigal gene 20505 20852 . - . ID=GCA008085315_01973_gene;locus_tag=GCA008085315_01973 contig_24 Pyrodigal CDS 20505 20852 . - 0 ID=GCA008085315_01973;Name=helix-turn-helix domain-containing protein;locus_tag=GCA008085315_01973;product=helix-turn-helix domain-containing protein;Parent=GCA008085315_01973_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_012820817.1,SO:0001217,UniParc:UPI0001B9F572,UniRef:UniRef100_UPI0001B9F572,UniRef:UniRef50_G4A9W8,UniRef:UniRef90_UPI000681BA70 contig_24 Pyrodigal gene 21102 21224 . - . ID=GCA008085315_01974_gene;locus_tag=GCA008085315_01974 contig_24 Pyrodigal CDS 21102 21224 . - 0 ID=GCA008085315_01974;Name=Oxygenase;locus_tag=GCA008085315_01974;product=Oxygenase;Parent=GCA008085315_01974_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A5D0EMB4 contig_24 Pyrodigal gene 21239 24040 . - . ID=GCA008085315_01975_gene;locus_tag=GCA008085315_01975;gene=polA contig_24 Pyrodigal CDS 21239 24040 . - 0 ID=GCA008085315_01975;Name=DNA polymerase I;locus_tag=GCA008085315_01975;product=DNA polymerase I;Dbxref=GO:0003676,GO:0003677,GO:0003887,GO:0006261,GO:0008408;gene=polA;Parent=GCA008085315_01975_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0749,COG:L,RefSeq:WP_148321026.1,SO:0001217,UniParc:UPI0011D9B8DB,UniRef:UniRef100_UPI0011D9B8DB,UniRef:UniRef50_A0A3S4QAB0,UniRef:UniRef90_A0A3S4QAB0;ec_number=2.7.7.7 contig_24 Pyrodigal gene 24257 24820 . + . ID=GCA008085315_01976_gene;locus_tag=GCA008085315_01976;gene=lomR contig_24 Pyrodigal CDS 24257 24820 . + 0 ID=GCA008085315_01976;Name=Outer membrane protein 18/16;locus_tag=GCA008085315_01976;product=Outer membrane protein 18/16;gene=lomR;Parent=GCA008085315_01976_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3637,COG:M,RefSeq:WP_005548103.1,SO:0001217,UniParc:UPI0001B9F56F,UniRef:UniRef100_A0A142G0S5,UniRef:UniRef50_A0A6H0T6F7,UniRef:UniRef90_Q8RR68 contig_24 Pyrodigal gene 24924 25154 . + . ID=GCA008085315_01977_gene;locus_tag=GCA008085315_01977;gene=yceK contig_24 Pyrodigal CDS 24924 25154 . + 0 ID=GCA008085315_01977;Name=YceK/YidQ family lipoprotein;locus_tag=GCA008085315_01977;product=YceK/YidQ family lipoprotein;gene=yceK;Parent=GCA008085315_01977_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5645,COG:S,RefSeq:WP_005539105.1,SO:0001217,UniParc:UPI0001B9F56E,UniRef:UniRef100_A0A142G0S6,UniRef:UniRef50_U1R4K1,UniRef:UniRef90_A0A142G0S6 contig_24 Pyrodigal gene 25164 27179 . + . ID=GCA008085315_01978_gene;locus_tag=GCA008085315_01978;gene=rep contig_24 Pyrodigal CDS 25164 27179 . + 0 ID=GCA008085315_01978;Name=DNA helicase Rep;locus_tag=GCA008085315_01978;product=DNA helicase Rep;Dbxref=GO:0003678,GO:0006268;gene=rep;Parent=GCA008085315_01978_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0210,COG:L,KEGG:K03656,RefSeq:WP_005548105.1,SO:0001217,UniParc:UPI0001B9F56D,UniRef:UniRef100_UPI0001B9F56D,UniRef:UniRef50_P09980,UniRef:UniRef90_E6KV30;ec_number=5.6.2.4 contig_24 tRNAscan-SE gene 27305 27398 . + . ID=GCA008085315_01979_gene;locus_tag=GCA008085315_01979;gene=trnS contig_24 tRNAscan-SE tRNA 27305 27398 . + . ID=GCA008085315_01979;Name=tRNA-Ser(gct);locus_tag=GCA008085315_01979;product=tRNA-Ser(gct);gene=trnS;anti_codon=gct;amino_acid=Ser;Parent=GCA008085315_01979_gene;inference=profile:tRNAscan:2.0;Note=SO:0000269 contig_24 tRNAscan-SE gene 27416 27492 . + . ID=GCA008085315_01980_gene;locus_tag=GCA008085315_01980;gene=trnR contig_24 tRNAscan-SE tRNA 27416 27492 . + . ID=GCA008085315_01980;Name=tRNA-Arg(acg);locus_tag=GCA008085315_01980;product=tRNA-Arg(acg);gene=trnR;anti_codon=acg;amino_acid=Arg;Parent=GCA008085315_01980_gene;inference=profile:tRNAscan:2.0;Note=SO:0001036 contig_24 tRNAscan-SE gene 27547 27623 . + . ID=GCA008085315_01981_gene;locus_tag=GCA008085315_01981;gene=trnR contig_24 tRNAscan-SE tRNA 27547 27623 . + . ID=GCA008085315_01981;Name=tRNA-Arg(acg);locus_tag=GCA008085315_01981;product=tRNA-Arg(acg);gene=trnR;anti_codon=acg;amino_acid=Arg;Parent=GCA008085315_01981_gene;inference=profile:tRNAscan:2.0;Note=SO:0001036 contig_24 Pyrodigal gene 27695 28075 . - . ID=GCA008085315_01982_gene;locus_tag=GCA008085315_01982 contig_24 Pyrodigal CDS 27695 28075 . - 0 ID=GCA008085315_01982;Name=PRD domain-containing protein;locus_tag=GCA008085315_01982;product=PRD domain-containing protein;Parent=GCA008085315_01982_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005567066.1,SO:0001217,UniParc:UPI0001B9F56C,UniRef:UniRef100_UPI0001B9F56C,UniRef:UniRef50_Q9CLZ1,UniRef:UniRef90_A0A142G0S8 contig_24 Pyrodigal gene 28204 28806 . + . ID=GCA008085315_01983_gene;locus_tag=GCA008085315_01983;gene=ycjU contig_24 Pyrodigal CDS 28204 28806 . + 0 ID=GCA008085315_01983;Name=Phosphatase YqaB;locus_tag=GCA008085315_01983;product=Phosphatase YqaB;gene=ycjU;Parent=GCA008085315_01983_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0637,COG:G,RefSeq:WP_005567064.1,SO:0001217,UniParc:UPI00022AC2C8,UniRef:UniRef100_UPI00022AC2C8,UniRef:UniRef50_Q9CLZ2,UniRef:UniRef90_A0A336N607 contig_24 Pyrodigal gene 28806 29411 . + . ID=GCA008085315_01984_gene;locus_tag=GCA008085315_01984;gene=wbbJ contig_24 Pyrodigal CDS 28806 29411 . + 0 ID=GCA008085315_01984;Name=Acetyltransferase;locus_tag=GCA008085315_01984;product=Acetyltransferase;gene=wbbJ;Parent=GCA008085315_01984_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0110,COG:R,KEGG:K00661,RefSeq:WP_005567063.1,SO:0001217,UniParc:UPI0001B9F569,UniRef:UniRef100_UPI0001B9F569,UniRef:UniRef50_A0A0F5EWL6,UniRef:UniRef90_A0A142G0T0;ec_number=2.3.1.79 contig_24 Pyrodigal gene 29414 29899 . + . ID=GCA008085315_01985_gene;locus_tag=GCA008085315_01985;gene=ygaA contig_24 Pyrodigal CDS 29414 29899 . + 0 ID=GCA008085315_01985;Name=DedA family protein;locus_tag=GCA008085315_01985;product=DedA family protein;gene=ygaA;Parent=GCA008085315_01985_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1238,COG:S,RefSeq:WP_005548119.1,SO:0001217,UniParc:UPI00022AC2C7,UniRef:UniRef100_UPI00022AC2C7,UniRef:UniRef50_P44005,UniRef:UniRef90_A0A142G0T1 contig_24 Infernal gene 29918 29997 . - . ID=GCA008085315_01986_gene;locus_tag=GCA008085315_01986;gene=JA04 contig_24 Infernal ncRNA 29918 29997 6.3e-19 - . ID=GCA008085315_01986;Name=Aggregatibacter sRNA JA04;locus_tag=GCA008085315_01986;product=Aggregatibacter sRNA JA04;Dbxref=RFAM:RF02732;Parent=GCA008085315_01986_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02732 contig_24 Pyrodigal gene 30112 30618 . + . ID=GCA008085315_01987_gene;locus_tag=GCA008085315_01987;gene=luxS contig_24 Pyrodigal CDS 30112 30618 . + 0 ID=GCA008085315_01987;Name=S-ribosylhomocysteine lyase;locus_tag=GCA008085315_01987;product=S-ribosylhomocysteine lyase;gene=luxS;Parent=GCA008085315_01987_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1854,COG:T,KEGG:K07173,RefSeq:WP_005548120.1,SO:0001217,UniParc:UPI0001B9F567,UniRef:UniRef100_G4A8X1,UniRef:UniRef50_P45578,UniRef:UniRef90_A0A142G0T2;ec_number=4.4.1.21 contig_24 Pyrodigal gene 30937 31596 . - . ID=GCA008085315_01988_gene;locus_tag=GCA008085315_01988;gene=rluA contig_24 Pyrodigal CDS 30937 31596 . - 0 ID=GCA008085315_01988;Name=bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA;locus_tag=GCA008085315_01988;product=bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA;Dbxref=GO:0001522,GO:0003723,GO:0009451,GO:0009982;gene=rluA;Parent=GCA008085315_01988_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0564,COG:J,KEGG:K06177,RefSeq:WP_005548125.1,SO:0001217,UniParc:UPI0001B9F565,UniRef:UniRef100_UPI0001B9F565,UniRef:UniRef50_P44782,UniRef:UniRef90_E6KV24;ec_number=5.4.99.29 contig_24 Pyrodigal gene 31977 32666 . + . ID=GCA008085315_01989_gene;locus_tag=GCA008085315_01989;gene=pnuC contig_24 Pyrodigal CDS 31977 32666 . + 0 ID=GCA008085315_01989;Name=nicotinamide riboside transporter PnuC;locus_tag=GCA008085315_01989;product=nicotinamide riboside transporter PnuC;Dbxref=GO:0015663,GO:0015890,GO:0016020;gene=pnuC;Parent=GCA008085315_01989_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3201,COG:H,KEGG:K03811,RefSeq:WP_148334001.1,SO:0001217,UniParc:UPI0011D5C1FF,UniRef:UniRef100_UPI0011D5C1FF,UniRef:UniRef50_Q57425,UniRef:UniRef90_A0A142G0W9 contig_24 Pyrodigal gene 32741 33439 . - . ID=GCA008085315_01990_gene;locus_tag=GCA008085315_01990;gene=trmN6 contig_24 Pyrodigal CDS 32741 33439 . - 0 ID=GCA008085315_01990;Name=tRNA1(Val) (adenine(37)-N6)-methyltransferase;locus_tag=GCA008085315_01990;product=tRNA1(Val) (adenine(37)-N6)-methyltransferase;gene=trmN6;Parent=GCA008085315_01990_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4123,COG:J,SO:0001217,UniRef:UniRef50_A0A0A2ZY61,UniRef:UniRef90_A0A142G0W8 contig_24 Pyrodigal gene 33538 34869 . + . ID=GCA008085315_01991_gene;locus_tag=GCA008085315_01991;gene=srmB contig_24 Pyrodigal CDS 33538 34869 . + 0 ID=GCA008085315_01991;Name=ATP-dependent RNA helicase SrmB;locus_tag=GCA008085315_01991;product=ATP-dependent RNA helicase SrmB;Dbxref=GO:0000027,GO:0003724;gene=srmB;Parent=GCA008085315_01991_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0513,COG:L,RefSeq:WP_005572001.1,SO:0001217,UniParc:UPI0001B9F561,UniRef:UniRef100_UPI0001B9F561,UniRef:UniRef50_P21507,UniRef:UniRef90_E6KV20;ec_number=3.6.4.13 contig_24 Infernal gene 35103 35205 . + . ID=GCA008085315_01992_gene;locus_tag=GCA008085315_01992;gene=AaHKsRNA22 contig_24 Infernal ncRNA 35103 35205 6.5e-16 + . ID=GCA008085315_01992;Name=Aggregatibacter sRNA 22;locus_tag=GCA008085315_01992;product=Aggregatibacter sRNA 22;Dbxref=RFAM:RF02902;Parent=GCA008085315_01992_gene;Note=SO:0000655;ncRNA_class=other;inference=profile:Rfam:RF02902 contig_24 Pyrodigal gene 35340 36641 . + . ID=GCA008085315_01993_gene;locus_tag=GCA008085315_01993 contig_24 Pyrodigal CDS 35340 36641 . + 0 ID=GCA008085315_01993;Name=ATP-binding protein;locus_tag=GCA008085315_01993;product=ATP-binding protein;Parent=GCA008085315_01993_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1373,COG:R,KEGG:K07133,RefSeq:WP_005548134.1,SO:0001217,UniParc:UPI0001B9F560,UniRef:UniRef100_UPI0001B9F560,UniRef:UniRef50_A0A1M7B608,UniRef:UniRef90_A0A5D0EHD9 contig_24 Pyrodigal gene 36700 37038 . + . ID=GCA008085315_01994_gene;locus_tag=GCA008085315_01994 contig_24 Pyrodigal CDS 36700 37038 . + 0 ID=GCA008085315_01994;Name=hypothetical protein;locus_tag=GCA008085315_01994;product=hypothetical protein;Parent=GCA008085315_01994_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_231092520.1,SO:0001217,UniParc:UPI0007933F14,UniRef:UniRef100_UPI0007933F14,UniRef:UniRef50_UPI0007933F14,UniRef:UniRef90_UPI0007933F14 contig_24 Pyrodigal gene 37035 38099 . + . ID=GCA008085315_01995_gene;locus_tag=GCA008085315_01995 contig_24 Pyrodigal CDS 37035 38099 . + 0 ID=GCA008085315_01995;Name=SIR2 family protein;locus_tag=GCA008085315_01995;product=SIR2 family protein;Parent=GCA008085315_01995_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_233439059.1,SO:0001217,UniParc:UPI001F1E307D,UniRef:UniRef100_UPI001F1E307D,UniRef:UniRef50_UPI001E46C064,UniRef:UniRef90_UPI001E46C064 contig_24 Pyrodigal gene 38102 38584 . + . ID=GCA008085315_01996_gene;locus_tag=GCA008085315_01996 contig_24 Pyrodigal CDS 38102 38584 . + 0 ID=GCA008085315_01996;Name=TIR domain-containing protein;locus_tag=GCA008085315_01996;product=TIR domain-containing protein;Parent=GCA008085315_01996_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005548138.1,SO:0001217,UniParc:UPI0001B9F55E,UniRef:UniRef100_UPI0001B9F55E,UniRef:UniRef50_A0A1V3J925,UniRef:UniRef90_UPI0011D45663 contig_24 Pyrodigal gene 38612 39256 . + . ID=GCA008085315_01997_gene;locus_tag=GCA008085315_01997 contig_24 Pyrodigal CDS 38612 39256 . + 0 ID=GCA008085315_01997;Name=TIR domain-containing protein;locus_tag=GCA008085315_01997;product=TIR domain-containing protein;Parent=GCA008085315_01997_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148334002.1,SO:0001217,UniParc:UPI0011DA14AA,UniRef:UniRef100_UPI0011DA14AA,UniRef:UniRef50_A3N1I7,UniRef:UniRef90_UPI001E58343B contig_24 Pyrodigal gene 39344 39976 . - . ID=GCA008085315_01998_gene;locus_tag=GCA008085315_01998;gene=pdxH contig_24 Pyrodigal CDS 39344 39976 . - 0 ID=GCA008085315_01998;Name=pyridoxamine 5'-phosphate oxidase;locus_tag=GCA008085315_01998;product=pyridoxamine 5'-phosphate oxidase;Dbxref=GO:0004733,GO:0008615,GO:0010181;gene=pdxH;Parent=GCA008085315_01998_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0259,COG:H,RefSeq:WP_005548142.1,SO:0001217,UniParc:UPI0001B9F55C,UniRef:UniRef100_UPI0001B9F55C,UniRef:UniRef50_P44909,UniRef:UniRef90_A0A5D0EH82;ec_number=1.4.3.5 contig_24 Pyrodigal gene 40147 41472 . + . ID=GCA008085315_01999_gene;locus_tag=GCA008085315_01999;gene=uhpC contig_24 Pyrodigal CDS 40147 41472 . + 0 ID=GCA008085315_01999;Name=Phosphoglycerate transporter family protein;locus_tag=GCA008085315_01999;product=Phosphoglycerate transporter family protein;gene=uhpC;Parent=GCA008085315_01999_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2271,COG:G,RefSeq:WP_148321024.1,SO:0001217,UniParc:UPI0011D3B22F,UniRef:UniRef100_UPI0011D3B22F,UniRef:UniRef50_P09836,UniRef:UniRef90_F0EVG1 contig_24 Pyrodigal gene 41590 41883 . - . ID=GCA008085315_02000_gene;locus_tag=GCA008085315_02000;gene=aagD contig_24 Pyrodigal CDS 41590 41883 . - 0 ID=GCA008085315_02000;Name=AagD;locus_tag=GCA008085315_02000;product=AagD;gene=aagD;Parent=GCA008085315_02000_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005541810.1,SO:0001217,UniParc:UPI0000E2CFEA,UniRef:UniRef100_Q06XS6,UniRef:UniRef50_A0A377IY44,UniRef:UniRef90_Q5VJB1 contig_24 Pyrodigal gene 41886 43121 . - . ID=GCA008085315_02001_gene;locus_tag=GCA008085315_02001;gene=pgaC contig_24 Pyrodigal CDS 41886 43121 . - 0 ID=GCA008085315_02001;Name=poly-beta-1%2C6-N-acetyl-D-glucosamine synthase;locus_tag=GCA008085315_02001;product=poly-beta-1%2C6-N-acetyl-D-glucosamine synthase;Dbxref=GO:0008375,GO:0042710;gene=pgaC;Parent=GCA008085315_02001_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1215,COG:N,RefSeq:WP_005548147.1,SO:0001217,UniParc:UPI000150CCF0,UniRef:UniRef100_A5HJW9,UniRef:UniRef50_A0A448U265,UniRef:UniRef90_A0A142G153 contig_24 Pyrodigal gene 43130 45046 . - . ID=GCA008085315_02002_gene;locus_tag=GCA008085315_02002;gene=pgaB contig_24 Pyrodigal CDS 43130 45046 . - 0 ID=GCA008085315_02002;Name=poly-beta-1%2C6-N-acetyl-D-glucosamine N-deacetylase PgaB;locus_tag=GCA008085315_02002;product=poly-beta-1%2C6-N-acetyl-D-glucosamine N-deacetylase PgaB;Dbxref=GO:0000271,GO:0019213;gene=pgaB;Parent=GCA008085315_02002_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0726,COG:GM,KEGG:K11931,RefSeq:WP_005548149.1,SO:0001217,UniParc:UPI000150CCEF,UniRef:UniRef100_A5HJW8,UniRef:UniRef50_A0A377IY95,UniRef:UniRef90_A5HJW8;ec_number=3.5.1.- contig_24 Pyrodigal gene 45062 47485 . - . ID=GCA008085315_02003_gene;locus_tag=GCA008085315_02003;gene=pgaA contig_24 Pyrodigal CDS 45062 47485 . - 0 ID=GCA008085315_02003;Name=poly-beta-1%2C6 N-acetyl-D-glucosamine export porin PgaA;locus_tag=GCA008085315_02003;product=poly-beta-1%2C6 N-acetyl-D-glucosamine export porin PgaA;Dbxref=GO:0009279,GO:1901515;gene=pgaA;Parent=GCA008085315_02003_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A5HJW7,UniRef:UniRef90_A5HJW7 contig_24 Pyrodigal gene 47752 48471 . - . ID=GCA008085315_02004_gene;locus_tag=GCA008085315_02004;gene=deoD contig_24 Pyrodigal CDS 47752 48471 . - 0 ID=GCA008085315_02004;Name=purine-nucleoside phosphorylase;locus_tag=GCA008085315_02004;product=purine-nucleoside phosphorylase;Dbxref=GO:0004731,GO:0006139;gene=deoD;Parent=GCA008085315_02004_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0813,COG:F,KEGG:K03784,RefSeq:WP_005548156.1,SO:0001217,UniParc:UPI0001B9F4E0,UniRef:UniRef100_UPI0001B9F4E0,UniRef:UniRef50_P0ABP8,UniRef:UniRef90_A0A142G150;ec_number=2.4.2.1 contig_24 Pyrodigal gene 48597 49847 . - . ID=GCA008085315_02005_gene;locus_tag=GCA008085315_02005;gene=nupC contig_24 Pyrodigal CDS 48597 49847 . - 0 ID=GCA008085315_02005;Name=Nucleoside permease;locus_tag=GCA008085315_02005;product=Nucleoside permease;gene=nupC;Parent=GCA008085315_02005_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1972,COG:F,RefSeq:WP_148321023.1,SO:0001217,UniParc:UPI0011D93DBF,UniRef:UniRef100_UPI0011D93DBF,UniRef:UniRef50_A0A023PZZ4,UniRef:UniRef90_A0A0K1N059 contig_24 Pyrodigal gene 50139 51314 . - . ID=GCA008085315_02006_gene;locus_tag=GCA008085315_02006;gene=cof contig_24 Pyrodigal CDS 50139 51314 . - 0 ID=GCA008085315_02006;Name=Hydrolase;locus_tag=GCA008085315_02006;product=Hydrolase;gene=cof;Parent=GCA008085315_02006_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0561,COG:HR,KEGG:K21064,RefSeq:WP_005548159.1,SO:0001217,UniParc:UPI0001B9F4DE,UniRef:UniRef100_UPI0001B9F4DE,UniRef:UniRef50_A0A5D0EIA3,UniRef:UniRef90_A0A5D0EIA3;ec_number=3.1.3.104 contig_24 Pyrodigal gene 51424 52260 . - . ID=GCA008085315_02007_gene;locus_tag=GCA008085315_02007;gene=manZ contig_24 Pyrodigal CDS 51424 52260 . - 0 ID=GCA008085315_02007;Name=PTS system%2C mannose/fructose/sorbose family%2C IID component;locus_tag=GCA008085315_02007;product=PTS system%2C mannose/fructose/sorbose family%2C IID component;gene=manZ;Parent=GCA008085315_02007_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3716,COG:G,RefSeq:WP_005548161.1,SO:0001217,UniParc:UPI0001B9F4DD,UniRef:UniRef100_UPI0001B9F4DD,UniRef:UniRef50_P26382,UniRef:UniRef90_F0ER63 contig_24 Pyrodigal gene 52274 53071 . - . ID=GCA008085315_02008_gene;locus_tag=GCA008085315_02008;gene=manY contig_24 Pyrodigal CDS 52274 53071 . - 0 ID=GCA008085315_02008;Name=PTS system mannose-specific EIIC component;locus_tag=GCA008085315_02008;product=PTS system mannose-specific EIIC component;gene=manY;Parent=GCA008085315_02008_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3715,COG:G,RefSeq:WP_148334003.1,SO:0001217,UniParc:UPI0011D8CC09,UniRef:UniRef100_UPI0011D8CC09,UniRef:UniRef50_Q9RGG3,UniRef:UniRef90_A0A336N4Y6 contig_24 Pyrodigal gene 53089 54054 . - . ID=GCA008085315_02009_gene;locus_tag=GCA008085315_02009;gene=agaB contig_24 Pyrodigal CDS 53089 54054 . - 0 ID=GCA008085315_02009;Name=PTS system mannose-specific EIIAB component;locus_tag=GCA008085315_02009;product=PTS system mannose-specific EIIAB component;gene=agaB;Parent=GCA008085315_02009_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3444,COG:G,KEGG:K02794,RefSeq:WP_148321022.1,SO:0001217,UniParc:UPI0011D830D9,UniRef:UniRef100_UPI0011D830D9,UniRef:UniRef50_A0A5D0EVE5,UniRef:UniRef90_A0A5D0EVE5;ec_number=2.7.1.191 contig_24 Pyrodigal gene 54341 54925 . - . ID=GCA008085315_02010_gene;locus_tag=GCA008085315_02010;gene=rsmD contig_24 Pyrodigal CDS 54341 54925 . - 0 ID=GCA008085315_02010;Name=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;locus_tag=GCA008085315_02010;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;Dbxref=GO:0031167,GO:0052913;gene=rsmD;Parent=GCA008085315_02010_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0742,COG:J,KEGG:K08316,RefSeq:WP_148334004.1,SO:0001217,UniParc:UPI0011D69A61,UniRef:UniRef100_UPI0011D69A61,UniRef:UniRef50_P44869,UniRef:UniRef90_A0A142G145;ec_number=2.1.1.171 contig_24 Pyrodigal gene 55013 56374 . + . ID=GCA008085315_02011_gene;locus_tag=GCA008085315_02011;gene=ftsY contig_24 Pyrodigal CDS 55013 56374 . + 0 ID=GCA008085315_02011;Name=signal recognition particle-docking protein FtsY;locus_tag=GCA008085315_02011;product=signal recognition particle-docking protein FtsY;Dbxref=GO:0003924,GO:0005047,GO:0006614,GO:0009306;gene=ftsY;Parent=GCA008085315_02011_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03110,RefSeq:WP_005548170.1,SO:0001217,UniParc:UPI0001B9F4D9,UniRef:UniRef100_UPI0001B9F4D9,UniRef:UniRef50_A0A2M8S4W0,UniRef:UniRef90_UPI0001B9F4D9 contig_24 Pyrodigal gene 56549 57553 . + . ID=GCA008085315_02012_gene;locus_tag=GCA008085315_02012 contig_24 Pyrodigal CDS 56549 57553 . + 0 ID=GCA008085315_02012;Name=tryptophan--tRNA ligase;locus_tag=GCA008085315_02012;product=tryptophan--tRNA ligase;Parent=GCA008085315_02012_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005575514.1,SO:0001217,UniParc:UPI00022ACAB5,UniRef:UniRef100_UPI00022ACAB5,UniRef:UniRef90_A0A5D0EMY5 contig_24 Pyrodigal gene 57640 58284 . - . ID=GCA008085315_02013_gene;locus_tag=GCA008085315_02013;gene=ribB contig_24 Pyrodigal CDS 57640 58284 . - 0 ID=GCA008085315_02013;Name=3%2C4-dihydroxy-2-butanone 4-phosphate synthase;locus_tag=GCA008085315_02013;product=3%2C4-dihydroxy-2-butanone 4-phosphate synthase;gene=ribB;Parent=GCA008085315_02013_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0108,COG:H,RefSeq:WP_005548174.1,SO:0001217,UniParc:UPI0001B9F4D7,UniRef:UniRef100_UPI0001B9F4D7,UniRef:UniRef50_P44866,UniRef:UniRef90_A0A142G173 contig_24 Infernal regulatory_region 58377 58560 5.7e-17 - . ID=FFLMJBKAJI_106;Name=FMN riboswitch aptamer (RFN element);product=FMN riboswitch aptamer (RFN element);Dbxref=RFAM:RF00050;inference=profile:Rfam:RF00050;Note=SO:0000035;regulatory_class=riboswitch contig_24 Pyrodigal gene 58964 59737 . - . ID=GCA008085315_02014_gene;locus_tag=GCA008085315_02014;gene=htpX contig_24 Pyrodigal CDS 58964 59737 . - 0 ID=GCA008085315_02014;Name=Deoxyribonuclease HsdR;locus_tag=GCA008085315_02014;product=Deoxyribonuclease HsdR;gene=htpX;Parent=GCA008085315_02014_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0501,COG:O,RefSeq:WP_005548176.1,SO:0001217,UniParc:UPI0001B9F4D6,UniRef:UniRef100_UPI0001B9F4D6,UniRef:UniRef50_A0A336N4Z6,UniRef:UniRef90_A0A5D0EKT4 contig_24 Pyrodigal gene 59813 60340 . - . ID=GCA008085315_02015_gene;locus_tag=GCA008085315_02015;gene=ppa contig_24 Pyrodigal CDS 59813 60340 . - 0 ID=GCA008085315_02015;Name=inorganic diphosphatase;locus_tag=GCA008085315_02015;product=inorganic diphosphatase;Dbxref=GO:0000287,GO:0004427,GO:0005737,GO:0006796;gene=ppa;Parent=GCA008085315_02015_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:C,COG:COG0221,RefSeq:WP_005548178.1,SO:0001217,UniParc:UPI0001B9F4D5,UniRef:UniRef100_UPI0001B9F4D5,UniRef:UniRef50_Q9PHM9,UniRef:UniRef90_Q7VPC0;ec_number=3.6.1.1 contig_24 Pyrodigal gene 60502 61746 . + . ID=GCA008085315_02016_gene;locus_tag=GCA008085315_02016;gene=mtr contig_24 Pyrodigal CDS 60502 61746 . + 0 ID=GCA008085315_02016;Name=tryptophan permease;locus_tag=GCA008085315_02016;product=tryptophan permease;Dbxref=GO:0005886,GO:0015173,GO:0015801;gene=mtr;Parent=GCA008085315_02016_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0814,COG:E,KEGG:K03835,RefSeq:WP_005548180.1,SO:0001217,UniParc:UPI0001B9F4D4,UniRef:UniRef100_UPI0001B9F4D4,UniRef:UniRef50_P44614,UniRef:UniRef90_E6KVS2 contig_24 Pyrodigal gene 62025 62342 . + . ID=GCA008085315_02017_gene;locus_tag=GCA008085315_02017 contig_24 Pyrodigal CDS 62025 62342 . + 0 ID=GCA008085315_02017;Name=DUF4298 domain-containing protein;locus_tag=GCA008085315_02017;product=DUF4298 domain-containing protein;Parent=GCA008085315_02017_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148321021.1,SO:0001217,UniParc:UPI0011DA6090,UniRef:UniRef100_UPI0011DA6090,UniRef:UniRef50_E6KV65,UniRef:UniRef90_A0A5D0EI74 contig_24 Pyrodigal gene 62724 63431 . - . ID=GCA008085315_02018_gene;locus_tag=GCA008085315_02018;gene=aphA contig_24 Pyrodigal CDS 62724 63431 . - 0 ID=GCA008085315_02018;Name=acid phosphatase AphA;locus_tag=GCA008085315_02018;product=acid phosphatase AphA;Dbxref=GO:0003993,GO:0030288,GO:0046872;gene=aphA;Parent=GCA008085315_02018_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3700,COG:PR,RefSeq:WP_005575508.1,SO:0001217,UniParc:UPI00022ACAB3,UniRef:UniRef100_UPI00022ACAB3,UniRef:UniRef50_P44009,UniRef:UniRef90_C9R7B6;ec_number=3.1.3.2 contig_24 Pyrodigal gene 63646 64173 . + . ID=GCA008085315_02019_gene;locus_tag=GCA008085315_02019;gene=hslV contig_24 Pyrodigal CDS 63646 64173 . + 0 ID=GCA008085315_02019;Name=ATP-dependent protease subunit HslV;locus_tag=GCA008085315_02019;product=ATP-dependent protease subunit HslV;Dbxref=GO:0004298,GO:0005839,GO:0009376,GO:0046872,GO:0051603;gene=hslV;Parent=GCA008085315_02019_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG5405,COG:O,KEGG:K01419,RefSeq:WP_005548189.1,SO:0001217,UniParc:UPI0001B9F4CF,UniRef:UniRef100_UPI0001B9F4CF,UniRef:UniRef50_P43772,UniRef:UniRef90_P43772;ec_number=3.4.25.2 contig_24 Pyrodigal gene 64194 65525 . + . ID=GCA008085315_02020_gene;locus_tag=GCA008085315_02020;gene=hslU contig_24 Pyrodigal CDS 64194 65525 . + 0 ID=GCA008085315_02020;Name=HslU--HslV peptidase ATPase subunit;locus_tag=GCA008085315_02020;product=HslU--HslV peptidase ATPase subunit;Dbxref=GO:0004176,GO:0005524,GO:0006508,GO:0009376;gene=hslU;Parent=GCA008085315_02020_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1220,COG:O,RefSeq:WP_005538655.1,SO:0001217,UniParc:UPI0001B9F4CE,UniRef:UniRef100_UPI0001B9F4CE,UniRef:UniRef50_P0A6H5,UniRef:UniRef90_A0A5D0EIZ3;ec_number=3.4.25.2 contig_24 Pyrodigal gene 65591 67174 . + . ID=GCA008085315_02021_gene;locus_tag=GCA008085315_02021;gene=nikA contig_24 Pyrodigal CDS 65591 67174 . + 0 ID=GCA008085315_02021;Name=nickel ABC transporter substrate-binding protein;locus_tag=GCA008085315_02021;product=nickel ABC transporter substrate-binding protein;Dbxref=GO:0009897,GO:0015413,GO:0015675,GO:0016151,GO:0030288,GO:0055052;gene=nikA;Parent=GCA008085315_02021_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0747,COG:E,RefSeq:WP_005548193.1,SO:0001217,UniParc:UPI0001B9F4CD,UniRef:UniRef100_UPI0001B9F4CD,UniRef:UniRef50_A6TX72,UniRef:UniRef90_A0A5D0EJN4;ec_number=7.2.2.- contig_24 Pyrodigal gene 67273 68016 . + . ID=GCA008085315_02022_gene;locus_tag=GCA008085315_02022;gene=mlaA contig_24 Pyrodigal CDS 67273 68016 . + 0 ID=GCA008085315_02022;Name=VacJ family lipoprotein;locus_tag=GCA008085315_02022;product=VacJ family lipoprotein;gene=mlaA;Parent=GCA008085315_02022_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2853,COG:M,KEGG:K04754,RefSeq:WP_032996149.1,SO:0001217,UniParc:UPI0002EACC75,UniRef:UniRef100_G4AAY2,UniRef:UniRef50_P44042,UniRef:UniRef90_A0AAP7L4E9 contig_24 Pyrodigal gene 68034 68528 . + . ID=GCA008085315_02023_gene;locus_tag=GCA008085315_02023;gene=yfbU contig_24 Pyrodigal CDS 68034 68528 . + 0 ID=GCA008085315_02023;Name=YfbU family protein;locus_tag=GCA008085315_02023;product=YfbU family protein;gene=yfbU;Parent=GCA008085315_02023_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3013,COG:S,KEGG:K09161,RefSeq:WP_005548195.1,SO:0001217,UniParc:UPI0001B9F4CB,UniRef:UniRef100_UPI0001B9F4CB,UniRef:UniRef50_P0A8W8,UniRef:UniRef90_A0A5D0EKS4 contig_24 Pyrodigal gene 68613 69296 . - . ID=GCA008085315_02024_gene;locus_tag=GCA008085315_02024;gene=gpmA contig_24 Pyrodigal CDS 68613 69296 . - 0 ID=GCA008085315_02024;Name=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;locus_tag=GCA008085315_02024;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;gene=gpmA;Parent=GCA008085315_02024_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0588,COG:G,KEGG:K01834,RefSeq:WP_005567036.1,SO:0001217,UniParc:UPI00022AC0EF,UniRef:UniRef100_UPI00022AC0EF,UniRef:UniRef50_Q88T35,UniRef:UniRef90_E6KV72;ec_number=5.4.2.11 contig_24 Pyrodigal gene 69602 71260 . + . ID=GCA008085315_02025_gene;locus_tag=GCA008085315_02025;gene=manB contig_24 Pyrodigal CDS 69602 71260 . + 0 ID=GCA008085315_02025;Name=Phosphoglucomutase PgmB;locus_tag=GCA008085315_02025;product=Phosphoglucomutase PgmB;gene=manB;Parent=GCA008085315_02025_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1109,COG:G,RefSeq:WP_148321020.1,SO:0001217,UniParc:UPI0011D5A4A7,UniRef:UniRef100_UPI0011D5A4A7,UniRef:UniRef50_Q57290,UniRef:UniRef90_A0A377JGH6 contig_24 Pyrodigal gene 71511 72728 . + . ID=GCA008085315_02026_gene;locus_tag=GCA008085315_02026;gene=envC contig_24 Pyrodigal CDS 71511 72728 . + 0 ID=GCA008085315_02026;Name=murein hydrolase activator EnvC;locus_tag=GCA008085315_02026;product=murein hydrolase activator EnvC;gene=envC;Parent=GCA008085315_02026_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG4942,COG:D,KEGG:K22719,SO:0001217,UniRef:UniRef50_P44864,UniRef:UniRef90_A0A5D0EM44 contig_24 Pyrodigal gene 72725 73552 . + . ID=GCA008085315_02027_gene;locus_tag=GCA008085315_02027;gene=yibQ contig_24 Pyrodigal CDS 72725 73552 . + 0 ID=GCA008085315_02027;Name=Divergent polysaccharide deacetylase family protein;locus_tag=GCA008085315_02027;product=Divergent polysaccharide deacetylase family protein;gene=yibQ;Parent=GCA008085315_02027_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2861,COG:G,KEGG:K09798,RefSeq:WP_148321019.1,SO:0001217,UniParc:UPI0011D63195,UniRef:UniRef100_UPI0011D63195,UniRef:UniRef50_P44863,UniRef:UniRef90_A0A5D0EI59 contig_24 Pyrodigal gene 73564 74268 . - . ID=GCA008085315_02028_gene;locus_tag=GCA008085315_02028;gene=comM contig_24 Pyrodigal CDS 73564 74268 . - 0 ID=GCA008085315_02028;Name=Competence protein ComM family protein;locus_tag=GCA008085315_02028;product=Competence protein ComM family protein;gene=comM;Parent=GCA008085315_02028_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148321431.1,SO:0001217,UniParc:UPI0011D4A90C,UniRef:UniRef100_UPI0011D4A90C,UniRef:UniRef50_E6KV85,UniRef:UniRef90_E6KV85 contig_24 Pyrodigal gene 74404 75066 . + . ID=GCA008085315_02029_gene;locus_tag=GCA008085315_02029;gene=tnsA contig_24 Pyrodigal CDS 74404 75066 . + 0 ID=GCA008085315_02029;Name=TnsA endonuclease N-terminal domain protein;locus_tag=GCA008085315_02029;product=TnsA endonuclease N-terminal domain protein;gene=tnsA;Parent=GCA008085315_02029_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005559213.1,SO:0001217,UniParc:UPI00022AC0EB,UniRef:UniRef100_G4AAZ0,UniRef:UniRef50_W0Q6I2,UniRef:UniRef90_I3DBM7 contig_24 Pyrodigal gene 75059 76978 . + . ID=GCA008085315_02030_gene;locus_tag=GCA008085315_02030 contig_24 Pyrodigal CDS 75059 76978 . + 0 ID=GCA008085315_02030;Name=Integrase core domain protein;locus_tag=GCA008085315_02030;product=Integrase core domain protein;Parent=GCA008085315_02030_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148321017.1,SO:0001217,UniParc:UPI0011D870D1,UniRef:UniRef100_UPI0011D870D1,UniRef:UniRef50_W0QB96,UniRef:UniRef90_I3DB98 contig_24 Pyrodigal gene 76978 77871 . + . ID=GCA008085315_02031_gene;locus_tag=GCA008085315_02031;gene=tniB contig_24 Pyrodigal CDS 76978 77871 . + 0 ID=GCA008085315_02031;Name=TniB;locus_tag=GCA008085315_02031;product=TniB;gene=tniB;Parent=GCA008085315_02031_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005541478.1,SO:0001217,UniParc:UPI0001B9F4C3,UniRef:UniRef100_G4AAZ2,UniRef:UniRef50_A0A0C5VFY1,UniRef:UniRef90_W0Q892 contig_24 Pyrodigal gene 77829 78947 . + . ID=GCA008085315_02032_gene;locus_tag=GCA008085315_02032;gene=tniQ contig_24 Pyrodigal CDS 77829 78947 . + 0 ID=GCA008085315_02032;Name=TniQ family protein;locus_tag=GCA008085315_02032;product=TniQ family protein;gene=tniQ;Parent=GCA008085315_02032_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148321016.1,SO:0001217,UniParc:UPI0011DB4AAD,UniRef:UniRef100_UPI0011DB4AAD,UniRef:UniRef50_Q65QY9,UniRef:UniRef90_G4AAZ3 contig_24 Pyrodigal gene 78944 80359 . + . ID=GCA008085315_02033_gene;locus_tag=GCA008085315_02033 contig_24 Pyrodigal CDS 78944 80359 . + 0 ID=GCA008085315_02033;Name=Transposase;locus_tag=GCA008085315_02033;product=Transposase;Parent=GCA008085315_02033_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniParc:UPI00022AC940,UniRef:UniRef100_G4AAZ4,UniRef:UniRef50_Q65QZ0,UniRef:UniRef90_E6KV90 contig_24 Pyrodigal gene 80483 80701 . + . ID=GCA008085315_02034_gene;locus_tag=GCA008085315_02034 contig_24 Pyrodigal CDS 80483 80701 . + 0 ID=GCA008085315_02034;Name=tRNA delta(2)-isopentenylpyrophosphate transferase;locus_tag=GCA008085315_02034;product=tRNA delta(2)-isopentenylpyrophosphate transferase;Parent=GCA008085315_02034_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_019518360.1,SO:0001217,UniParc:UPI000371A74D,UniRef:UniRef100_UPI000371A74D,UniRef:UniRef50_E6KV91,UniRef:UniRef90_E6KV91 contig_24 Pyrodigal gene 80837 81145 . - . ID=GCA008085315_02035_gene;locus_tag=GCA008085315_02035 contig_24 Pyrodigal CDS 80837 81145 . - 0 ID=GCA008085315_02035;Name=Transcriptional regulator;locus_tag=GCA008085315_02035;product=Transcriptional regulator;Parent=GCA008085315_02035_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_019518359.1,SO:0001217,UniParc:UPI00037D8146,UniRef:UniRef100_UPI00037D8146,UniRef:UniRef50_E6KV92,UniRef:UniRef90_E6KV92 contig_24 Pyrodigal gene 81187 82767 . + . ID=GCA008085315_02036_gene;locus_tag=GCA008085315_02036;gene=spoIVCA contig_24 Pyrodigal CDS 81187 82767 . + 0 ID=GCA008085315_02036;Name=Site-specific recombinase;locus_tag=GCA008085315_02036;product=Site-specific recombinase;gene=spoIVCA;Parent=GCA008085315_02036_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1961,COG:L,KEGG:K06400,RefSeq:WP_005559219.1,SO:0001217,UniParc:UPI00022ADC7E,UniRef:UniRef100_G4AAZ5,UniRef:UniRef50_V7ICC5,UniRef:UniRef90_G4AAZ5 contig_24 Pyrodigal gene 82709 83557 . + . ID=GCA008085315_02037_gene;locus_tag=GCA008085315_02037;gene=parB contig_24 Pyrodigal CDS 82709 83557 . + 0 ID=GCA008085315_02037;Name=putative partitioning protein ParB;locus_tag=GCA008085315_02037;product=putative partitioning protein ParB;gene=parB;Parent=GCA008085315_02037_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K03497,RefSeq:WP_005571821.1,SO:0001217,UniParc:UPI00022AC69E,UniRef:UniRef100_G4AAZ6,UniRef:UniRef50_V7IF67,UniRef:UniRef90_G4AAZ6 contig_24 Pyrodigal gene 83550 84404 . + . ID=GCA008085315_02038_gene;locus_tag=GCA008085315_02038;gene=spo0J contig_24 Pyrodigal CDS 83550 84404 . + 0 ID=GCA008085315_02038;Name=RepB plasmid partition;locus_tag=GCA008085315_02038;product=RepB plasmid partition;gene=spo0J;Parent=GCA008085315_02038_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1475,COG:D,KEGG:K03497,RefSeq:WP_005559223.1,SO:0001217,UniParc:UPI00022AC69F,UniRef:UniRef100_G4AAZ7,UniRef:UniRef50_A0A249A2G2,UniRef:UniRef90_G4AAZ7 contig_24 Pyrodigal gene 84523 84807 . - . ID=GCA008085315_02039_gene;locus_tag=GCA008085315_02039 contig_24 Pyrodigal CDS 84523 84807 . - 0 ID=GCA008085315_02039;Name=Protein SGE1;locus_tag=GCA008085315_02039;product=Protein SGE1;Parent=GCA008085315_02039_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_019518356.1,SO:0001217,UniParc:UPI00037B06EE,UniRef:UniRef100_UPI00037B06EE,UniRef:UniRef50_G4AAZ8,UniRef:UniRef90_G4AAZ8 contig_24 Pyrodigal gene 85226 85741 . - . ID=GCA008085315_02040_gene;locus_tag=GCA008085315_02040 contig_24 Pyrodigal CDS 85226 85741 . - 0 ID=GCA008085315_02040;Name=Immunity protein 15;locus_tag=GCA008085315_02040;product=Immunity protein 15;Parent=GCA008085315_02040_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005559226.1,SO:0001217,UniParc:UPI00022ADC81,UniRef:UniRef100_G4AAZ9,UniRef:UniRef50_A0A0P7J7L8,UniRef:UniRef90_G4AAZ9 contig_24 Pyrodigal gene 85745 86686 . - . ID=GCA008085315_02041_gene;locus_tag=GCA008085315_02041 contig_24 Pyrodigal CDS 85745 86686 . - 0 ID=GCA008085315_02041;Name=Rhs-family protein;locus_tag=GCA008085315_02041;product=Rhs-family protein;Parent=GCA008085315_02041_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=SO:0001217,UniRef:UniRef50_A0A1B3JH03 contig_24 Pyrodigal gene 86884 88293 . - . ID=GCA008085315_02042_gene;locus_tag=GCA008085315_02042 contig_24 Pyrodigal CDS 86884 88293 . - 0 ID=GCA008085315_02042;Name=hypothetical protein;locus_tag=GCA008085315_02042;product=hypothetical protein;Parent=GCA008085315_02042_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=PFAM:PF05593.20 contig_24 Pyrodigal gene 88306 90930 . - . ID=GCA008085315_02043_gene;locus_tag=GCA008085315_02043 contig_24 Pyrodigal CDS 88306 90930 . - 0 ID=GCA008085315_02043;Name=type VI secretion system tip protein TssI/VgrG;locus_tag=GCA008085315_02043;product=type VI secretion system tip protein TssI/VgrG;Parent=GCA008085315_02043_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=KEGG:K11904,SO:0001217,UniRef:UniRef50_UPI0022777A8C,UniRef:UniRef90_UPI0022777A8C contig_24 Pyrodigal gene 91202 91861 . + . ID=GCA008085315_02044_gene;locus_tag=GCA008085315_02044;gene=dam contig_24 Pyrodigal CDS 91202 91861 . + 0 ID=GCA008085315_02044;Name=site-specific DNA-methyltransferase (adenine-specific);locus_tag=GCA008085315_02044;product=site-specific DNA-methyltransferase (adenine-specific);gene=dam;Parent=GCA008085315_02044_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0338,COG:L,KEGG:K06223,RefSeq:WP_148334005.1,SO:0001217,UniParc:UPI0011D865EC,UniRef:UniRef100_UPI0011D865EC,UniRef:UniRef50_G4AB01,UniRef:UniRef90_G4AB01;ec_number=2.1.1.72 contig_24 Pyrodigal gene 91877 92704 . + . ID=GCA008085315_02045_gene;locus_tag=GCA008085315_02045;gene=eNDO3c contig_24 Pyrodigal CDS 91877 92704 . + 0 ID=GCA008085315_02045;Name=Thermostable 8-oxoguanine DNA glycosylase;locus_tag=GCA008085315_02045;product=Thermostable 8-oxoguanine DNA glycosylase;gene=eNDO3c;Parent=GCA008085315_02045_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1059,COG:LV,KEGG:K03653,RefSeq:WP_005559233.1,SO:0001217,UniParc:UPI00022ADC84,UniRef:UniRef100_G4AB02,UniRef:UniRef50_N9MW42,UniRef:UniRef90_G4AB02;ec_number=4.2.99.18 contig_24 Pyrodigal gene 92642 93325 . - . ID=GCA008085315_02046_gene;locus_tag=GCA008085315_02046 contig_24 Pyrodigal CDS 92642 93325 . - 0 ID=GCA008085315_02046;Name=nitroreductase;locus_tag=GCA008085315_02046;product=nitroreductase;Parent=GCA008085315_02046_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005593449.1,SO:0001217,UniParc:UPI0002AC2E42,UniRef:UniRef100_UPI0002AC2E42,UniRef:UniRef50_UPI00290908B9,UniRef:UniRef90_UPI00290908B9 contig_24 Pyrodigal gene 93530 93910 . - . ID=GCA008085315_02047_gene;locus_tag=GCA008085315_02047 contig_24 Pyrodigal CDS 93530 93910 . - 0 ID=GCA008085315_02047;Name=7-cyano-7-deazaguanine synthase;locus_tag=GCA008085315_02047;product=7-cyano-7-deazaguanine synthase;Parent=GCA008085315_02047_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_233439056.1,SO:0001217,UniParc:UPI001F454665,UniRef:UniRef100_UPI001F454665,UniRef:UniRef50_UPI00311D6316,UniRef:UniRef90_UPI001F454665 contig_24 Pyrodigal gene 93946 95193 . - . ID=GCA008085315_02048_gene;locus_tag=GCA008085315_02048;gene=rCL contig_24 Pyrodigal CDS 93946 95193 . - 0 ID=GCA008085315_02048;Name=Nucleoside 2-deoxyribosyltransferase;locus_tag=GCA008085315_02048;product=Nucleoside 2-deoxyribosyltransferase;gene=rCL;Parent=GCA008085315_02048_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG3613,COG:F,RefSeq:WP_005567021.1,SO:0001217,UniParc:UPI00022AE228,UniRef:UniRef100_UPI00022AE228,UniRef:UniRef50_G4AB04,UniRef:UniRef90_G4AB04 contig_24 Pyrodigal gene 95236 95553 . - . ID=GCA008085315_02049_gene;locus_tag=GCA008085315_02049 contig_24 Pyrodigal CDS 95236 95553 . - 0 ID=GCA008085315_02049;Name=hypothetical protein;locus_tag=GCA008085315_02049;product=hypothetical protein;Parent=GCA008085315_02049_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_148321015.1,SO:0001217,UniParc:UPI0011DA2407,UniRef:UniRef100_UPI0011DC7B9E,UniRef:UniRef50_UPI0011DC7B9E,UniRef:UniRef90_UPI0011DC7B9E contig_24 Pyrodigal gene 95781 97529 . - . ID=GCA008085315_02050_gene;locus_tag=GCA008085315_02050;gene=tnsE contig_24 Pyrodigal CDS 95781 97529 . - 0 ID=GCA008085315_02050;Name=TnsE C-terminal domain-containing protein;locus_tag=GCA008085315_02050;product=TnsE C-terminal domain-containing protein;gene=tnsE;Parent=GCA008085315_02050_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=RefSeq:WP_005559237.1,SO:0001217,UniParc:UPI00022ADC86,UniRef:UniRef100_G4AB05,UniRef:UniRef50_A0A328C3P2,UniRef:UniRef90_I3DBJ2 contig_24 Pyrodigal gene 97585 97701 . - . ID=GCA008085315_02051_gene;locus_tag=GCA008085315_02051 contig_24 Pyrodigal CDS 97585 97701 . - 0 ID=GCA008085315_02051;Name=hypothetical protein;locus_tag=GCA008085315_02051;product=hypothetical protein;Parent=GCA008085315_02051_gene;inference=ab initio prediction:Pyrodigal:3.5 contig_24 Pyrodigal gene 97815 98429 . - . ID=GCA008085315_02052_gene;locus_tag=GCA008085315_02052;gene=yihA contig_24 Pyrodigal CDS 97815 98429 . - 0 ID=GCA008085315_02052;Name=ribosome biogenesis GTP-binding protein YihA/YsxC;locus_tag=GCA008085315_02052;product=ribosome biogenesis GTP-binding protein YihA/YsxC;Dbxref=GO:0003924,GO:0005525,GO:0005737,GO:0042254,GO:0043022;gene=yihA;Parent=GCA008085315_02052_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0218,COG:D,RefSeq:WP_005548244.1,SO:0001217,UniParc:UPI0001B9F444,UniRef:UniRef100_UPI0001B9F444,UniRef:UniRef50_Q8E8J7,UniRef:UniRef90_E6KV99 contig_24 Pyrodigal gene 98562 99437 . + . ID=GCA008085315_02053_gene;locus_tag=GCA008085315_02053;gene=virK contig_24 Pyrodigal CDS 98562 99437 . + 0 ID=GCA008085315_02053;Name=DUF535 domain-containing protein;locus_tag=GCA008085315_02053;product=DUF535 domain-containing protein;gene=virK;Parent=GCA008085315_02053_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2990,COG:S,KEGG:K09824,RefSeq:WP_005548245.1,SO:0001217,UniParc:UPI0001B9F442,UniRef:UniRef100_UPI0001B9F442,UniRef:UniRef50_Q57273,UniRef:UniRef90_A0A5D0EH28 contig_24 Pyrodigal gene 99533 100009 . - . ID=GCA008085315_02054_gene;locus_tag=GCA008085315_02054;gene=trmL contig_24 Pyrodigal CDS 99533 100009 . - 0 ID=GCA008085315_02054;Name=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;locus_tag=GCA008085315_02054;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;Dbxref=GO:0001510,GO:0002131,GO:0002132,GO:0003723,GO:0005737,GO:0008173,GO:0042802,GO:0141098,GO:0141102;gene=trmL;Parent=GCA008085315_02054_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0219,COG:J,KEGG:K03216,RefSeq:WP_005548246.1,SO:0001217,UniParc:UPI0001B9F441,UniRef:UniRef100_UPI0001B9F441,UniRef:UniRef50_P44868,UniRef:UniRef90_P44868;ec_number=2.1.1.207 contig_24 Pyrodigal gene 100128 100625 . - . ID=GCA008085315_02055_gene;locus_tag=GCA008085315_02055;gene=ybhB contig_24 Pyrodigal CDS 100128 100625 . - 0 ID=GCA008085315_02055;Name=Phosphatidylethanolamine-binding protein;locus_tag=GCA008085315_02055;product=Phosphatidylethanolamine-binding protein;gene=ybhB;Parent=GCA008085315_02055_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1881,COG:R,RefSeq:WP_005548247.1,SO:0001217,UniParc:UPI0001B9F440,UniRef:UniRef100_UPI0001B9F440,UniRef:UniRef50_Q65SS7,UniRef:UniRef90_E6KVA2 contig_24 Pyrodigal gene 100730 101572 . - . ID=GCA008085315_02056_gene;locus_tag=GCA008085315_02056;gene=nlpA contig_24 Pyrodigal CDS 100730 101572 . - 0 ID=GCA008085315_02056;Name=Lipoprotein;locus_tag=GCA008085315_02056;product=Lipoprotein;gene=nlpA;Parent=GCA008085315_02056_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1464,COG:P,KEGG:K02073,RefSeq:WP_005548248.1,SO:0001217,UniParc:UPI0001B9F43F,UniRef:UniRef100_UPI0001B9F43F,UniRef:UniRef50_P31728,UniRef:UniRef90_E6KVA3 contig_24 Pyrodigal gene 101607 102284 . - . ID=GCA008085315_02057_gene;locus_tag=GCA008085315_02057;gene=metP contig_24 Pyrodigal CDS 101607 102284 . - 0 ID=GCA008085315_02057;Name=D-methionine ABC superfamily ATP binding cassette transporter%2C membrane protein;locus_tag=GCA008085315_02057;product=D-methionine ABC superfamily ATP binding cassette transporter%2C membrane protein;gene=metP;Parent=GCA008085315_02057_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG2011,COG:E,RefSeq:WP_005548249.1,SO:0001217,UniParc:UPI0001B9F43E,UniRef:UniRef100_UPI0001B9F43E,UniRef:UniRef50_P46492,UniRef:UniRef90_E6KVA4 contig_24 Pyrodigal gene 102274 103311 . - . ID=GCA008085315_02058_gene;locus_tag=GCA008085315_02058;gene=metN contig_24 Pyrodigal CDS 102274 103311 . - 0 ID=GCA008085315_02058;Name=methionine ABC transporter ATP-binding protein MetN;locus_tag=GCA008085315_02058;product=methionine ABC transporter ATP-binding protein MetN;Dbxref=GO:0005524,GO:0009276,GO:0033232,GO:0048473;gene=metN;Parent=GCA008085315_02058_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG1135,COG:E,RefSeq:WP_005567008.1,SO:0001217,UniParc:UPI00022AE223,UniRef:UniRef100_UPI00022AE223,UniRef:UniRef50_Q5E715,UniRef:UniRef90_E6KVA5;ec_number=7.4.2.11 contig_24 Pyrodigal gene 103508 104065 . + . ID=GCA008085315_02059_gene;locus_tag=GCA008085315_02059;gene=gmhB contig_24 Pyrodigal CDS 103508 104065 . + 0 ID=GCA008085315_02059;Name=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;locus_tag=GCA008085315_02059;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;Dbxref=GO:0005975,GO:0016791;gene=gmhB;Parent=GCA008085315_02059_gene;inference=ab initio prediction:Pyrodigal:3.5;Note=COG:COG0241,COG:E,RefSeq:WP_005548251.1,SO:0001217,UniParc:UPI0001B9F43C,UniRef:UniRef100_UPI0001B9F43C,UniRef:UniRef50_P63228,UniRef:UniRef90_A0A142G1P1;ec_number=3.1.3.82