# Annotated with Bakta # Software: v1.11.4 # Database: v6.0, full # DOI: 10.1099/mgen.0.000685 # URL: github.com/oschwengers/bakta #Sequence Id Type Start Stop Strand Locus Tag Gene Product DbXrefs contig_1 cds 95 262 - GCA012955505_00001 hypothetical protein contig_1 cds 476 853 - GCA012955505_00002 hypothetical protein contig_1 cds 878 1096 - GCA012955505_00003 (pseudo) Putative glycine betaine/carnitine/choline transport system permease protein SO:0001217, UniRef:UniRef50_A0A5S9MI67, UniRef:UniRef90_A0A380DS60 contig_1 cds 1101 1430 - GCA012955505_00004 Putative glycine betaine/carnitine/choline transport system permease protein SO:0001217, UniRef:UniRef50_A0A380FKR7 contig_1 cds 1548 1853 - GCA012955505_00005 hypothetical protein contig_1 cds 2015 2335 - GCA012955505_00006 hypothetical protein contig_1 cds 2338 3000 - GCA012955505_00007 ABC transporter permease SO:0001217, UniRef:UniRef50_O34878, UniRef:UniRef90_A0A2K0AW87 contig_1 cds 2997 3599 - GCA012955505_00008 Osmoprotectant SO:0001217, UniRef:UniRef50_A0A2T4LNU1 contig_1 cds 3631 3837 - GCA012955505_00009 ATP-binding cassette domain-containing protein SO:0001217, UniRef:UniRef50_UPI0013D2954F contig_1 cds 3876 4157 - GCA012955505_00010 ATP-binding cassette domain-containing protein SO:0001217, UniRef:UniRef50_UPI00232D3885 contig_1 cds 4330 4692 - GCA012955505_00011 L-carnitine dehydrogenase SO:0001217, UniRef:UniRef50_A0A6N3FSA6 contig_1 cds 4901 5275 - GCA012955505_00012 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein SO:0001217, UniRef:UniRef50_UPI000FF6A60D contig_1 cds 5223 5597 - GCA012955505_00013 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein SO:0001217, UniRef:UniRef50_UPI00214D2F15, UniRef:UniRef90_UPI00214D2F15 contig_1 cds 5597 6481 - GCA012955505_00014 NADPH:quinone reductase EC:2.3.1.317, KEGG:K27837, RefSeq:WP_048667879.1, SO:0001217, UniParc:UPI00066154EA, UniRef:UniRef100_UPI00066154EA, UniRef:UniRef50_A0A061NPB7, UniRef:UniRef90_A0A2A1KBR1 contig_1 cds 6511 7167 - GCA012955505_00015 TetR/AcrR family transcriptional regulator SO:0001217, UniRef:UniRef50_I0JR51, UniRef:UniRef90_A0A2K0AW78 contig_1 cds 7438 7857 - GCA012955505_00016 FGGY-family carbohydrate kinase SO:0001217, UniRef:UniRef50_UPI00069F0820, UniRef:UniRef90_UPI002ACD4E08 contig_1 cds 8071 8355 - GCA012955505_00017 Ribosomal-protein-serine N-acetyltransferase SO:0001217, UniRef:UniRef50_A0A380HBT4 contig_1 cds 8389 8634 - GCA012955505_00018 GNAT family N-acetyltransferase SO:0001217, UniRef:UniRef50_A0A5B2YYH6 contig_1 cds 9272 9865 - GCA012955505_00019 yvbJ (pseudo) Membrane-associated protein COG:COG4640, COG:S, KEGG:K21463, SO:0001217, UniRef:UniRef50_A0A380G2J1, UniRef:UniRef90_A0A028ZH99 contig_1 cds 10067 10345 - GCA012955505_00020 hypothetical protein PFAM:PF13240.11, PFAM:PF13248.11 contig_1 cds 10345 10524 - GCA012955505_00021 hypothetical protein contig_1 cds 10619 10828 - GCA012955505_00022 hypothetical protein contig_1 cds 10934 11302 - GCA012955505_00023 lepB signal peptidase I EC:3.4.21.89, GO:0004252, GO:0006465, GO:0009306, GO:0016020, SO:0001217, UniRef:UniRef50_UPI002FBF0E26, UniRef:UniRef90_UPI00372BD7F5 contig_1 cds 11600 12001 + GCA012955505_00024 yxeA YxeA family protein COG:COG5294, COG:S, SO:0001217, UniRef:UniRef50_A0A2K0AW72, UniRef:UniRef90_A0A2K0AW72 contig_1 cds 12025 12783 + GCA012955505_00025 lolD ABC transporter ATP-binding protein COG:COG1136, COG:M, RefSeq:WP_011276903.1, SO:0001217, UniParc:UPI000054BFB1, UniRef:UniRef100_A0A2A1K9H9, UniRef:UniRef50_O34697, UniRef:UniRef90_A0A2A1K9H9 contig_1 cds 12773 14656 + GCA012955505_00026 Bacitracin ABC transporter permease KEGG:K11632, RefSeq:WP_053015787.1, SO:0001217, UniParc:UPI00069DEF48, UniRef:UniRef100_UPI00069DEF48, UniRef:UniRef50_Q9KWJ6, UniRef:UniRef90_A0A2A1KA59 contig_1 cds 14684 14878 + GCA012955505_00027 vraH VraH family protein RefSeq:WP_011276905.1, SO:0001217, UniParc:UPI000054BFB3, UniRef:UniRef100_A0A028ZH42, UniRef:UniRef50_A0A028ZH42, UniRef:UniRef90_A0A028ZH42 contig_1 cds 15200 15712 + GCA012955505_00028 Spy0128 family protein SO:0001217, UniRef:UniRef50_UPI0020BE0CA5 contig_1 cds 15765 16337 - GCA012955505_00029 hipB Transcriptional regulator COG:COG1396, COG:K, RefSeq:WP_011276907.1, SO:0001217, UniParc:UPI000054BFB5, UniRef:UniRef100_A0A028ZGG7, UniRef:UniRef50_A0A0H2VIN2, UniRef:UniRef90_A0A028ZGG7 contig_1 cds 16593 17132 - GCA012955505_00030 acrR AcrR family transcriptional regulator COG:COG1309, COG:K, RefSeq:WP_046309824.1, SO:0001217, UniParc:UPI00061B2BF4, UniRef:UniRef100_A0A7Z1N049, UniRef:UniRef50_S2XY57, UniRef:UniRef90_A0A028ZHL0 contig_1 cds 17095 17493 - GCA012955505_00031 DUF3147 domain-containing protein RefSeq:WP_033079921.1, SO:0001217, UniParc:UPI00051A78FB, UniRef:UniRef100_A0A7Z1N2G1, UniRef:UniRef50_Q2FUQ7, UniRef:UniRef90_A0A028ZHB1 contig_1 cds 17512 17874 - GCA012955505_00032 DUF3147 domain-containing protein RefSeq:WP_016930935.1, SO:0001217, UniParc:UPI0002D3F0F7, UniRef:UniRef100_A0A028ZH49, UniRef:UniRef50_Q2FUQ6, UniRef:UniRef90_Q4L2Z6 contig_1 cds 18098 18937 - GCA012955505_00033 noc nucleoid occlusion protein COG:COG1475, COG:D, GO:0032466, GO:0043565, KEGG:K03497, RefSeq:WP_011276912.1, SO:0001217, UniParc:UPI000054BFBA, UniRef:UniRef100_A0A023UE48, UniRef:UniRef50_A0A6N3FL57, UniRef:UniRef90_A0A023UE48 contig_1 cds 18983 19705 - GCA012955505_00034 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG COG:COG0357, COG:J, EC:2.1.1.-, EC:2.1.1.170, GO:0005829, GO:0008168, GO:0031167, GO:0046118, GO:0070043, KEGG:K03501, RefSeq:WP_037537749.1, SO:0001217, UniParc:UPI0004512DBF, UniRef:UniRef100_UPI0030F494F5, UniRef:UniRef50_P25813, UniRef:UniRef90_Q4L2Z4 contig_1 cds 19705 21582 - GCA012955505_00035 mnmG tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG COG:COG0445, COG:J, GO:0002098, GO:0005829, GO:0008033, GO:0030488, GO:0050660, KEGG:K03495, RefSeq:WP_011276914.1, SO:0001217, UniParc:UPI000054BFBC, UniRef:UniRef100_Q4L2Z3, UniRef:UniRef50_Q2FUQ3, UniRef:UniRef90_Q2FUQ3 contig_1 cds 21703 23082 - GCA012955505_00036 mnmE tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE COG:COG0486, COG:J, EC:3.6.-.-, GO:0002098, GO:0003924, GO:0005525, GO:0005829, GO:0006400, GO:0030488, GO:0046872, RefSeq:WP_011276915.1, SO:0001217, UniParc:UPI000054BFBD, UniRef:UniRef100_Q4L2Z2, UniRef:UniRef50_Q8DPZ8, UniRef:UniRef90_Q2FUQ2 contig_1 cds 23236 23580 - GCA012955505_00037 rnpA ribonuclease P protein component COG:COG0594, COG:J, EC:3.1.26.5, GO:0000049, GO:0001682, GO:0004526, GO:0008033, GO:0030677, GO:0042781, SO:0001217, UniParc:UPI000054BFBE, UniRef:UniRef100_Q4L2Z1, UniRef:UniRef50_Q2FUQ1, UniRef:UniRef90_Q4L2Z1 contig_1 cds 23699 23836 - GCA012955505_00038 rpmH 50S ribosomal protein L34 COG:COG0230, COG:J, GO:0000315, GO:0003735, GO:0005840, GO:0006412, GO:0022625, GO:1990904, KEGG:K02914, RefSeq:WP_000240855.1, SO:0001217, UniParc:UPI0000133FD1, UniRef:UniRef100_Q2FUQ0, UniRef:UniRef50_A5VMV2, UniRef:UniRef90_Q2FUQ0 contig_1 oriC 23837 24504 ? origin of replication contig_1 cds 24507 25862 + GCA012955505_00039 dnaA chromosomal replication initiator protein DnaA COG:COG0593, COG:L, GO:0003677, GO:0003688, GO:0005524, GO:0005737, GO:0005886, GO:0006270, GO:0006275, GO:0016887, KEGG:K02313, RefSeq:WP_011274359.1, SO:0001217, UniParc:UPI000054B59E, UniRef:UniRef100_Q4LAL5, UniRef:UniRef50_Q2G2H5, UniRef:UniRef90_Q4LAL5 contig_1 cds 26163 27296 + GCA012955505_00040 dnaN DNA polymerase III subunit beta COG:COG0592, COG:L, EC:2.7.7.7, GO:0003677, GO:0003887, GO:0005737, GO:0006260, GO:0006271, GO:0008408, GO:0009360, KEGG:K02338, RefSeq:WP_011274360.1, SO:0001217, UniParc:UPI000054B59F, UniRef:UniRef100_A0A028ZHM2, UniRef:UniRef50_Q9RCA1, UniRef:UniRef90_Q5HK00 contig_1 cds 27675 27908 + GCA012955505_00041 RNA-binding protein KEGG:K14761, RefSeq:WP_011274361.1, SO:0001217, UniParc:UPI000054B5A0, UniRef:UniRef100_A0A028ZHC3, UniRef:UniRef50_A0A028ZHC3, UniRef:UniRef90_A0A028ZHC3 contig_1 cds 27905 29011 + GCA012955505_00042 recF DNA replication/repair protein RecF COG:COG1195, COG:L, GO:0000731, GO:0003697, GO:0005524, GO:0005737, GO:0006260, GO:0006281, GO:0006302, GO:0006310, GO:0009432, SO:0001217, UniRef:UniRef50_Q9CE70, UniRef:UniRef90_Q4LAL2 contig_1 cds 29021 29452 + GCA012955505_00043 ATP-binding protein SO:0001217, UniRef:UniRef50_A0A846DTV8, UniRef:UniRef90_UPI0006D696DC contig_1 cds 29631 30209 + GCA012955505_00044 (pseudo) DNA topoisomerase (ATP-hydrolyzing) SO:0001217, UniRef:UniRef50_A0A380E9A5, UniRef:UniRef90_A0A380E9A5 contig_1 cds 30164 30364 + GCA012955505_00045 (pseudo) toprim domain-containing protein SO:0001217, UniRef:UniRef50_A0AAW6M7D0, UniRef:UniRef90_UPI00210EC523 contig_1 cds 30433 30927 + GCA012955505_00046 toprim domain-containing protein SO:0001217, UniRef:UniRef50_A0A7V5GAP9, UniRef:UniRef90_UPI002853A079 contig_1 cds 31025 33724 + GCA012955505_00047 gyrA DNA gyrase subunit A COG:COG0188, COG:L, EC:5.6.2.2, GO:0003677, GO:0003916, GO:0003918, GO:0005524, GO:0006259, GO:0006265, KEGG:K02469, SO:0001217, UniRef:UniRef50_Q2FKQ0, UniRef:UniRef90_A0A380FVE8 contig_1 cds 33826 34638 - GCA012955505_00048 nnr2 ADP-dependent (S)-NAD(P)H-hydrate dehydratase COG:COG0063, COG:F, RefSeq:WP_016930928.1, SO:0001217, UniParc:UPI0002FB9438, UniRef:UniRef100_A0A023UFZ8, UniRef:UniRef50_Q2G2P8, UniRef:UniRef90_A0A2K4DN40 contig_1 ncRNA-region 35005 35208 + T-box leader RFAM:RF00230, SO:0000140 contig_1 cds 35293 36579 + GCA012955505_00049 serS serine--tRNA ligase COG:COG0172, COG:J, EC:6.1.1.11, GO:0000166, GO:0004828, GO:0005524, GO:0005737, GO:0006434, GO:0016260, GO:0016740, KEGG:K01875, RefSeq:WP_016930927.1, SO:0001217, UniParc:UPI0002E5877C, UniRef:UniRef100_A0A028ZHC8, UniRef:UniRef50_Q4A172, UniRef:UniRef90_Q5HK07 contig_1 cds 37028 37732 + GCA012955505_00050 azlC Branched-chain amino acid ABC transporter permease COG:COG1296, COG:E, KEGG:K26605, SO:0001217, UniRef:UniRef50_Q2G2P6, UniRef:UniRef90_A0A2J8BDT4 contig_1 cds 37747 38103 + GCA012955505_00051 (pseudo) alpha/beta fold hydrolase SO:0001217, UniRef:UniRef50_UPI00075651C3, UniRef:UniRef90_UPI00075651C3 contig_1 cds 38109 38417 + GCA012955505_00052 hypothetical protein contig_1 cds 38556 39101 + GCA012955505_00053 yybS (pseudo) DUF2232 domain-containing protein COG:COG4241, COG:S, SO:0001217, UniRef:UniRef50_Q2G2T2, UniRef:UniRef90_A0A028ZHN8 contig_1 cds 39196 39441 + GCA012955505_00054 DUF2232 domain-containing protein SO:0001217, UniRef:UniRef50_A0A380DP15, UniRef:UniRef90_UPI000AF8A43D contig_1 cds 39469 39993 + GCA012955505_00055 hypothetical protein PFAM:PF21370.4 contig_1 cds 40021 40272 + GCA012955505_00056 hypothetical protein PFAM:PF24898.1 contig_1 cds 40350 41021 + GCA012955505_00057 (pseudo) DHH family phosphoesterase EC:3.1.4.59, KEGG:K22927, SO:0001217, UniRef:UniRef50_UPI000DB5AB9C, UniRef:UniRef90_UPI000DB5AB9C contig_1 cds 41174 41413 + GCA012955505_00058 DHHA1 domain-containing protein SO:0001217, UniRef:UniRef50_UPI00031B3490 contig_1 cds 41410 41856 + GCA012955505_00059 rplI 50S ribosomal protein L9 COG:COG0359, COG:J, GO:0003735, GO:0005840, GO:0006412, GO:0019843, GO:1990904, KEGG:K02939, RefSeq:WP_016930923.1, SO:0001217, UniParc:UPI000307E533, UniRef:UniRef100_A0A028ZH76, UniRef:UniRef50_B9DPY3, UniRef:UniRef90_Q5HK14 contig_1 cds 42063 43463 + GCA012955505_00060 dnaB replicative DNA helicase COG:COG0305, COG:L, EC:3.6.4.12, EC:5.6.2.3, GO:0003677, GO:0003678, GO:0005524, GO:0006260, KEGG:K02314, RefSeq:WP_011274373.1, SO:0001217, UniParc:UPI000054B5AC, UniRef:UniRef100_A0A028ZGR5, UniRef:UniRef50_A0A5R9B465, UniRef:UniRef90_A0A5R9B465 contig_1 cds 43741 45024 + GCA012955505_00061 purA adenylosuccinate synthase COG:COG0104, COG:F, EC:6.3.4.4, GO:0000287, GO:0004019, GO:0005525, GO:0005737, GO:0006164, GO:0044208, GO:0046040, KEGG:K01939, RefSeq:WP_011274374.1, SO:0001217, UniParc:UPI000054B5AD, UniRef:UniRef100_Q4LAK0, UniRef:UniRef50_Q03ET4, UniRef:UniRef90_Q5HK16 contig_1 tRNA 45515 45589 + GCA012955505_00062 trnE tRNA-Glu(ttc) SO:0000259 contig_1 tRNA 45596 45668 + GCA012955505_00063 trnD tRNA-Asp(gtc) SO:0000256 contig_1 cds 46147 46848 + GCA012955505_00064 yycF response regulator YycF COG:COG0745, COG:TK, GO:0000156, GO:0000976, GO:0005829, GO:0006355, GO:0032993, RefSeq:WP_011274375.1, SO:0001217, UniParc:UPI000054B5AE, UniRef:UniRef100_Q4LAJ9, UniRef:UniRef50_P37478, UniRef:UniRef90_Q2G2U6 contig_1 cds 46861 48687 + GCA012955505_00065 walK cell wall metabolism sensor histidine kinase WalK COG:COG5002, COG:T, EC:2.7.13.3, GO:0000155, GO:0000156, GO:0005524, GO:0005886, GO:0006355, GO:0007165, GO:0007234, GO:0016020, GO:0016310, GO:0030295, RefSeq:WP_016930922.1, SO:0001217, UniParc:UPI000316AFFE, UniRef:UniRef100_A0A028ZHE0, UniRef:UniRef50_Q2G2U4, UniRef:UniRef90_Q4LAJ8 contig_1 cds 48677 50008 + GCA012955505_00066 yycH Regulatory protein YycH domain-containing protein COG:COG4863, COG:T, RefSeq:WP_033079928.1, SO:0001217, UniParc:UPI00044EEB64, UniRef:UniRef100_A0A028ZH82, UniRef:UniRef50_A0A654CPY7, UniRef:UniRef90_A0A2A1KAH1 contig_1 cds 50009 50800 + GCA012955505_00067 yycI Regulatory protein YycH-like domain-containing protein COG:COG4853, COG:T, RefSeq:WP_033079929.1, SO:0001217, UniParc:UPI0004490D13, UniRef:UniRef100_A0A028ZGS4, UniRef:UniRef50_Q2G2U2, UniRef:UniRef90_A0A2A1KD50 contig_1 cds 51068 51868 + GCA012955505_00068 MBL fold metallo-hydrolase RefSeq:WP_011274380.1, SO:0001217, UniParc:UPI000054B5B3, UniRef:UniRef100_A0A2A1K839, UniRef:UniRef90_Q2G2U5 contig_1 cds 52411 52752 + GCA012955505_00069 Ribosomal RNA large subunit methyltransferase H SO:0001217, UniRef:UniRef50_B1GVC5 contig_1 cds 52986 53237 + GCA012955505_00070 Phage protein SO:0001217, UniRef:UniRef50_B2DCN7, UniRef:UniRef90_UPI00280A6667 contig_1 cds 53373 54071 + GCA012955505_00071 GIY-YIG domain-containing protein SO:0001217, UniRef:UniRef50_I6SCA4 contig_1 cds 54857 55312 + GCA012955505_00072 DUF6038 domain-containing protein SO:0001217, UniRef:UniRef50_UPI001104DA1B, UniRef:UniRef90_UPI001104DA1B contig_1 cds 55511 56611 + GCA012955505_00073 DNA-directed DNA polymerase family A palm domain-containing protein RefSeq:WP_000449985.1, SO:0001217, UniParc:UPI00000BF0E1, UniRef:UniRef100_H3K0M8, UniRef:UniRef50_Q4A138, UniRef:UniRef90_A0A9Q9K4N6 contig_1 cds 56604 56975 + GCA012955505_00074 Intein C-terminal splicing domain-containing protein RefSeq:WP_001058156.1, SO:0001217, UniParc:UPI0000DBECC0, UniRef:UniRef100_T1T0D0, UniRef:UniRef50_A0A2D0UYG6, UniRef:UniRef90_T1T0D0 contig_1 cds 56972 58615 + GCA012955505_00075 SF3 helicase domain-containing protein RefSeq:WP_001015578.1, SO:0001217, UniParc:UPI00016400A3, UniRef:UniRef100_T1T1L1, UniRef:UniRef50_A0A482KD69, UniRef:UniRef90_T1T1L1 contig_1 cds 58569 58685 + GCA012955505_00076 hypothetical protein SO:0001217, UniParc:UPI0001C11CA9, UniRef:UniRef100_T1SZG3, UniRef:UniRef50_Q4A136, UniRef:UniRef90_Q4A136 contig_1 cds 58841 60517 + GCA012955505_00077 ccrC cassette chromosome recombinase CcrC COG:COG1961, COG:L, KEGG:K06400, RefSeq:WP_000676596.1, SO:0001217, UniParc:UPI00016400A4, UniRef:UniRef100_T1SZM0, UniRef:UniRef50_Q4LAG0, UniRef:UniRef90_Q4LAG0 contig_1 cds 60623 60961 + GCA012955505_00078 Phage protein RefSeq:WP_000171559.1, SO:0001217, UniParc:UPI0000DBECC3, UniRef:UniRef100_A0A2D0UXG7, UniRef:UniRef50_Q4A134, UniRef:UniRef90_Q4A134 contig_1 cds 61057 61368 + GCA012955505_00079 Pyridoxal phosphate-dependent enzyme RefSeq:WP_001083109.1, SO:0001217, UniParc:UPI0000DBECC4, UniRef:UniRef100_A0A2D0US16, UniRef:UniRef50_Q4A149, UniRef:UniRef90_A0A3D8YK99 contig_1 cds 61384 61878 + GCA012955505_00080 Transposase SO:0001217, UniRef:UniRef50_A0A6B9V013 contig_1 cds 62027 62701 - GCA012955505_00081 tnp IS6 family IS431mec transposase COG:COG3316, COG:X, GO:0003677, GO:0004803, GO:0006310, GO:0015074, GO:0032196, IS:IS431mec, RefSeq:WP_001106056.1, SO:0001217, UniParc:UPI0000DBECC6, UniRef:UniRef100_A0A2D0URW1, UniRef:UniRef50_P0C1L0, UniRef:UniRef90_P0C1L0 contig_1 cds 62959 63126 + GCA012955505_00082 pksG hydroxymethylglutaryl-CoA synthase COG:COG3425, COG:I, EC:2.3.3.10, GO:0004421, KEGG:K01641, RefSeq:WP_000894158.1, SO:0001217, UniParc:UPI00000D76B1, UniRef:UniRef100_Q5HK27, UniRef:UniRef50_R3WMN8, UniRef:UniRef90_E0D4Z2 contig_1 cds 64043 64786 + GCA012955505_00083 ugpQ Glycerophosphoryl diester phosphodiesterase COG:COG0584, COG:I, RefSeq:WP_000958858.1, SO:0001217, UniParc:UPI0000006C77, UniRef:UniRef100_Q5HK29, UniRef:UniRef50_S2XRR6, UniRef:UniRef90_A0A386R0S6 contig_1 cds 64883 65311 + GCA012955505_00084 maoC Acyl dehydratase COG:COG2030, COG:I, RefSeq:WP_000872606.1, SO:0001217, UniParc:UPI0000006C78, UniRef:UniRef100_Q5HK30, UniRef:UniRef50_P96670, UniRef:UniRef90_A0AAJ5CUA4 contig_1 cds 65357 67000 - GCA012955505_00085 mecA PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA EC:3.4.16.4, GO:0005886, GO:0008360, GO:0008658, GO:0009252, GO:0046677, GO:0051301, GO:0071555, GO:0071972, KEGG:K02545, NCBIProtein:WP_000721306.1, SO:0001217, UniRef:UniRef50_P07944, UniRef:UniRef90_P07944 contig_1 cds 66988 67218 - GCA012955505_00086 hypothetical protein contig_1 cds 67405 67548 + GCA012955505_00087 tnp IS6 family IS431mec transposase COG:COG3316, COG:X, GO:0003677, GO:0004803, GO:0006310, GO:0015074, GO:0032196, SO:0001217, UniParc:UPI000054B5CB, UniRef:UniRef100_A0A088B1U8, UniRef:UniRef50_P0C1L0, UniRef:UniRef90_P0C1L0 contig_1 cds 68936 69112 + GCA012955505_00088 hypothetical protein contig_1 cds 69259 69915 + GCA012955505_00089 hypothetical protein SO:0001217, UniRef:UniRef50_UPI000AFDC5AA contig_1 cds 69875 70699 + GCA012955505_00090 (pseudo) hypothetical protein SO:0001217, UniRef:UniRef50_A0A2K0AWR3, UniRef:UniRef90_A0A2K0AWR3 contig_1 cds 70696 71169 + GCA012955505_00091 hypothetical protein SO:0001217, UniRef:UniRef50_UPI001F178F85 contig_1 cds 71364 72473 + GCA012955505_00092 DNA-directed DNA polymerase family A palm domain-containing protein RefSeq:WP_000283873.1, SO:0001217, UniParc:UPI000054B5D1, UniRef:UniRef100_T1T0E4, UniRef:UniRef50_Q4A138, UniRef:UniRef90_T1T0E4 contig_1 cds 72545 73219 - GCA012955505_00093 tnp IS6 family IS431mec transposase COG:COG3316, COG:X, GO:0004803, IS:IS431mec, RefSeq:WP_001105999.1, SO:0001217, UniParc:UPI00000AF923, UniRef:UniRef100_A0A0B5KXI4, UniRef:UniRef50_P0C1L0, UniRef:UniRef90_A0A0B5KXI4 contig_1 cds 73278 73892 + GCA012955505_00094 Omega-protein RefSeq:WP_313959516.1, SO:0001217, UniParc:UPI0028D175EE, UniRef:UniRef100_UPI0028D175EE, UniRef:UniRef50_A0A0U1MH25, UniRef:UniRef90_A0A0U1MH25 contig_1 cds 74113 74727 - GCA012955505_00095 Cch helix turn helix domain-containing protein SO:0001217, UniParc:UPI0001C11A7F, UniRef:UniRef100_A0A0U1MH53, UniRef:UniRef50_A0A3D8ZC97, UniRef:UniRef90_A0A3D8ZC97 contig_1 cds 75201 75560 - GCA012955505_00096 Zinc/iron permease RefSeq:WP_001631039.1, SO:0001217, UniParc:UPI00000E4C76, UniRef:UniRef100_B9V2B9, UniRef:UniRef50_B9V2B9, UniRef:UniRef90_B9V2B9 contig_1 cds 75767 76093 + GCA012955505_00097 arsR Metalloregulator ArsR/SmtB family transcription factor COG:COG0640, COG:K, RefSeq:WP_000391495.1, SO:0001217, UniParc:UPI0002198A5F, UniRef:UniRef100_F8WKE9, UniRef:UniRef50_O31844, UniRef:UniRef90_F8WKE9 contig_1 cds 76196 76294 + GCA012955505_00098 hypothetical protein SO:0001217, UniParc:UPI0004518E14, UniRef:UniRef100_A0A7Z1N5C8, UniRef:UniRef50_B9V2C0, UniRef:UniRef90_B9V2C0 contig_1 cds 76423 78348 + GCA012955505_00099 zntA Cadmium and zinc resistance protein C COG:COG2217, COG:P, RefSeq:WP_000790094.1, SO:0001217, UniParc:UPI0001C11A81, UniRef:UniRef100_U5LTY3, UniRef:UniRef50_A0A956SLI0, UniRef:UniRef90_U5LTY3 contig_1 cds 79262 80617 - GCA012955505_00100 cstB persulfide dioxygenase-sulfurtransferase CstB BlastRules:WP_000465472, COG:COG0607, COG:P, SO:0001217, UniRef:UniRef50_G5ELA4, UniRef:UniRef90_A0A380FXP9 contig_1 cds 80636 81703 - GCA012955505_00101 Dihydroneopterin aldolase RefSeq:WP_000085030.1, SO:0001217, UniParc:UPI0001C11A84, UniRef:UniRef100_F8WKF2, UniRef:UniRef50_B9DJV1, UniRef:UniRef90_F8WKF2 contig_1 cds 81842 82102 + GCA012955505_00102 cstR persulfide-sensing transcriptional repressor CstR BlastRules:WP_001105087, COG:COG1937, COG:K, RefSeq:WP_000456195.1, SO:0001217, UniParc:UPI0001C11A85, UniRef:UniRef100_A0A3G1RMP8, UniRef:UniRef50_A0A725BA15, UniRef:UniRef90_Q5HKB5 contig_1 cds 82126 82857 + GCA012955505_00103 putative membrane transporter protein RefSeq:WP_002491719.1, SO:0001217, UniParc:UPI0001C11A86, UniRef:UniRef100_A0A380FUQ9, UniRef:UniRef50_A0A0H2G7M4, UniRef:UniRef90_A0A380FUT8 contig_1 cds 83069 83236 + GCA012955505_00104 ATPase copper transport SO:0001217, UniParc:UPI00032D8C41, UniRef:UniRef100_A0A0U1MIP1, UniRef:UniRef50_A0A0U1MIP1, UniRef:UniRef90_A0A0U1MIP1 contig_1 cds 83254 83799 + GCA012955505_00105 DUF1541 domain-containing protein SO:0001217, UniRef:UniRef50_A0A0B5KSV7, UniRef:UniRef90_A0A0B5KSV7 contig_1 cds 84151 85137 + GCA012955505_00106 ADP-ribosylglycohydrolase family protein RefSeq:WP_000653291.1, SO:0001217, UniParc:UPI00026C2137, UniRef:UniRef100_L7SV37, UniRef:UniRef50_A0A347WLW7, UniRef:UniRef90_A0A7Z1SDR1 contig_1 cds 85156 86016 + GCA012955505_00107 cytosine permease SO:0001217, UniRef:UniRef50_UPI000D1C2A52 contig_1 cds 86257 87195 + GCA012955505_00108 Ribokinase RefSeq:WP_000842690.1, SO:0001217, UniParc:UPI000381B36D, UniRef:UniRef100_A0A0B5L9T2, UniRef:UniRef50_L7SW28, UniRef:UniRef90_L7SW28 contig_1 cds 87325 87924 - GCA012955505_00109 tnp IS6 family transposase GO:0004803, SO:0001217, UniRef:UniRef50_P0C1L0, UniRef:UniRef90_A0A811I8G3 contig_1 cds 88264 88965 + GCA012955505_00110 (pseudo) hypothetical protein RefSeq:WP_049386310.1, SO:0001217, UniParc:UPI00066B0C51, UniRef:UniRef100_A0A221KKL5, UniRef:UniRef50_A0AAE7Q2W3, UniRef:UniRef90_A0A221KKL5 contig_1 cds 89483 89650 + GCA012955505_00111 Truncated NADP-dependent alcohol dehydrogenase RefSeq:WP_011274384.1, SO:0001217, UniParc:UPI000054B5B9, UniRef:UniRef100_A0A060PW14, UniRef:UniRef50_A0A060PW14, UniRef:UniRef90_A0A060PW14 contig_1 cds 90059 90304 - GCA012955505_00112 Transposase for ISSha1 SO:0001217, UniRef:UniRef50_Q4L8F7, UniRef:UniRef90_Q4L8F7 contig_1 cds 90336 90596 - GCA012955505_00113 transposase family protein SO:0001217, UniRef:UniRef50_A0AAX1RYS6, UniRef:UniRef90_UPI001D0D4265 contig_1 cds 91096 91791 - GCA012955505_00114 ompR DNA-binding response regulator KdeP COG:COG0745, COG:TK, RefSeq:WP_011274386.1, SO:0001217, UniParc:UPI000054B5BC, UniRef:UniRef100_A0A640MZ28, UniRef:UniRef50_Q2FWH6, UniRef:UniRef90_Q5HK60 contig_1 cds 91766 94546 - GCA012955505_00115 kdpD histidine kinase COG:COG2205, COG:T, SO:0001217, UniRef:UniRef50_Q2FWH7, UniRef:UniRef90_A0A9P2YWR7 contig_1 sorf 94518 94598 + GCA012955505_00116 K(+)-transporting ATPase subunit F RefSeq:WP_000631574.1, SO:0001217, UniParc:UPI0001B3AC35, UniRef:UniRef100_A0A2U0IPG9, UniRef:UniRef50_A0A2U0IPG9, UniRef:UniRef90_A0A2U0IPG9 contig_1 cds 94619 96295 + GCA012955505_00117 kdpA potassium-transporting ATPase subunit KdpA COG:COG2060, COG:P, EC:7.2.2.6, GO:0005886, GO:0006813, GO:0008556, GO:0030955, GO:0031004, KEGG:K01546, RefSeq:WP_011274388.1, SO:0001217, UniParc:UPI000054B5BE, UniRef:UniRef100_Q4LAI3, UniRef:UniRef50_O32327, UniRef:UniRef90_Q5HK63 contig_1 cds 96314 98335 + GCA012955505_00118 kdpB1 K(+)-transporting ATPase subunit B COG:COG2216, COG:P, EC:7.2.2.6, GO:0000287, GO:0005524, GO:0005886, GO:0008556, GO:0016887, RefSeq:WP_011274389.1, SO:0001217, UniParc:UPI000054B5BF, UniRef:UniRef100_Q4LAI2, UniRef:UniRef50_Q4LAI2, UniRef:UniRef90_Q4LAI2 contig_1 cds 98351 98908 + GCA012955505_00119 kdpC2 K(+)-transporting ATPase subunit C COG:COG2156, COG:P, GO:0005524, GO:0005886, GO:0008556, GO:0045121, RefSeq:WP_016931276.1, SO:0001217, UniParc:UPI000316CAB4, UniRef:UniRef100_A0A9Q4H2L1, UniRef:UniRef50_Q4LAI1, UniRef:UniRef90_Q4LAI1 contig_1 cds 98936 99082 + GCA012955505_00120 hypothetical protein RefSeq:WP_011274391.1, SO:0001217, UniParc:UPI000054B5C1, UniRef:UniRef100_A0A640MYU1, UniRef:UniRef50_A0A640MYU1, UniRef:UniRef90_A0A640MYU1 contig_1 cds 99203 99589 + GCA012955505_00121 hypothetical protein SO:0001217, UniRef:UniRef50_A0A640MZI6, UniRef:UniRef90_A0A640MZI6 contig_1 cds 99841 100233 + GCA012955505_00122 putative membrane transporter protein SO:0001217, UniRef:UniRef50_A0A640N015, UniRef:UniRef90_A0A640N015 contig_1 cds 100405 100704 + GCA012955505_00123 YSIRK Gram-positive signal peptide domain-containing protein RefSeq:WP_016931279.1, SO:0001217, UniParc:UPI0002EBB02F, UniRef:UniRef100_A0A640MZ60, UniRef:UniRef50_A0A640MZ60, UniRef:UniRef90_A0A640MZ60 contig_1 cds 101015 101689 + GCA012955505_00124 tnp IS6 family IS431mec transposase COG:COG3316, COG:X, GO:0003677, GO:0004803, GO:0006310, GO:0015074, GO:0032196, IS:IS431mec, RefSeq:WP_053016564.1, SO:0001217, UniParc:UPI00049AE98C, UniRef:UniRef100_A0A060PLL4, UniRef:UniRef50_P0C1L0, UniRef:UniRef90_P0C1L0 contig_1 cds 102203 102544 - GCA012955505_00125 soxR HTH merR-type domain-containing protein COG:COG0789, COG:K, SO:0001217, UniRef:UniRef50_S2XM84, UniRef:UniRef90_A0A060PP48 contig_1 cds 102622 103305 + GCA012955505_00126 yajL ThiJ/PfpI family protein COG:COG0693, COG:V, RefSeq:WP_002434046.1, SO:0001217, UniParc:UPI000054B5F6, UniRef:UniRef100_A0A640N3L5, UniRef:UniRef50_A0A380FVZ3, UniRef:UniRef90_A0A380BVM7 contig_1 cds 103327 103992 + GCA012955505_00127 wcaG putative sugar epimerase YhfK COG:COG0451, COG:M, RefSeq:WP_002434095.1, SO:0001217, UniParc:UPI000054B5F7, UniRef:UniRef100_A0A640N034, UniRef:UniRef50_A0A1W7A9I9, UniRef:UniRef90_A0A653YF14 contig_1 cds 103996 105000 + GCA012955505_00128 curA NADP-dependent oxidoreductase COG:COG2130, COG:QR, RefSeq:WP_002434486.1, SO:0001217, UniParc:UPI000054B5F8, UniRef:UniRef100_A0A640MZR5, UniRef:UniRef50_A0A1H5ZK44, UniRef:UniRef90_A0A380HJ68 contig_1 cds 105009 105374 + GCA012955505_00129 doxX DoxX family protein COG:COG4270, COG:R, RefSeq:WP_002434567.1, SO:0001217, UniParc:UPI000054B5F9, UniRef:UniRef100_A0A640N4Y1, UniRef:UniRef50_A0A2A4H095, UniRef:UniRef90_A0A2A4H095 contig_1 cds 106073 106513 + GCA012955505_00130 Cadmium transporter SO:0001217, UniRef:UniRef50_A0AAP8GF38, UniRef:UniRef90_A0AAP8GF38 contig_1 cds 106532 106873 + GCA012955505_00131 arsR Cadmium resistant accessory protein COG:COG0640, COG:K, RefSeq:WP_011274432.1, SO:0001217, UniParc:UPI000054B5FB, UniRef:UniRef100_A0A640N3N1, UniRef:UniRef50_D2J743, UniRef:UniRef90_F8WKI8 contig_1 cds 106893 107294 - GCA012955505_00132 arsC thioredoxin-dependent arsenate reductase COG:COG0394, COG:T, EC:1.20.4.4, GO:0004725, GO:0005737, GO:0030612, GO:0046685, KEGG:K03741, NCBIProtein:AAA25638.1, RefSeq:WP_011274433.1, SO:0001217, UniParc:UPI000054B5FC, UniRef:UniRef100_Q4LAB5, UniRef:UniRef50_P45947, UniRef:UniRef90_Q4LAB5 contig_1 cds 107312 108601 - GCA012955505_00133 arsB arsenite efflux transporter membrane subunit ArsB COG:COG1055, COG:P, GO:0005886, GO:0015105, GO:0015700, GO:0016020, GO:0046685, KEGG:K03893, NCBIProtein:AAA25637.1, SO:0001217, UniParc:UPI000054B5FD, UniRef:UniRef100_A0A640MZT4, UniRef:UniRef50_Q5HF02, UniRef:UniRef90_P30329 contig_1 cds 108601 108918 - GCA012955505_00134 arsR Arsenical resistance operon repressor COG:COG0640, COG:K, RefSeq:WP_011274435.1, SO:0001217, UniParc:UPI000054B5FE, UniRef:UniRef100_A0A640N118, UniRef:UniRef50_P30338, UniRef:UniRef90_W1I757 contig_1 cds 109171 111231 + GCA012955505_00135 copB putative copper-transporting P-type ATPase B COG:COG2217, COG:P, EC:7.2.2.8, GO:0005507, GO:0005524, GO:0005886, GO:0016887, GO:0043682, GO:0055070, GO:0140581, RefSeq:WP_053023653.1, SO:0001217, UniParc:UPI00069E7F4B, UniRef:UniRef100_UPI00069E7F4B, UniRef:UniRef50_Q5HKB0, UniRef:UniRef90_Q5HKB0 contig_1 cds 111249 111794 + GCA012955505_00136 DUF1541 domain-containing protein RefSeq:WP_016931282.1, SO:0001217, UniParc:UPI00027EAB81, UniRef:UniRef100_A0A060PLQ0, UniRef:UniRef50_A0A0B5KSV7, UniRef:UniRef90_A0A0B5KSV7 contig_1 cds 112170 112655 + GCA012955505_00137 rimI N-acetyltransferase domain-containing protein COG:COG0456, COG:J, RefSeq:WP_016931283.1, SO:0001217, UniParc:UPI0003037797, UniRef:UniRef100_A0A640MZ05, UniRef:UniRef50_B9E9P3, UniRef:UniRef90_Q4LA99 contig_1 cds 112836 113249 + GCA012955505_00138 type I site-specific deoxyribonuclease SO:0001217, UniParc:UPI0002AB70A3, UniRef:UniRef100_A0A640MZB9, UniRef:UniRef50_Q4LA98, UniRef:UniRef90_Q4LA98 contig_1 cds 113340 114845 - GCA012955505_00139 putP sodium/proline symporter PutP GO:0005298, GO:0006814, GO:0015824, GO:0016020, GO:0031402, SO:0001217, UniRef:UniRef50_Q2FWY7, UniRef:UniRef90_A0A1B1UYA4 contig_1 cds 115278 115826 + GCA012955505_00140 GIY-YIG nuclease family protein SO:0001217, UniRef:UniRef50_A0A1M6KWE1, UniRef:UniRef90_UPI002B250AD2 contig_1 cds 115875 116030 + GCA012955505_00141 (pseudo) hypothetical protein SO:0001217, UniRef:UniRef50_A0A640MZV7, UniRef:UniRef90_A0A640MZV7 contig_1 cds 116057 116656 + GCA012955505_00142 tnp IS6 family transposase GO:0004803, SO:0001217, UniRef:UniRef50_P0C1L0, UniRef:UniRef90_A0A811I8G3 contig_1 cds 116794 117915 + GCA012955505_00143 trxB Pyridine nucleotide-disulfide oxidoreductase COG:COG0492, COG:O, RefSeq:WP_016931288.1, SO:0001217, UniParc:UPI0002FDA229, UniRef:UniRef100_A0A640MZ30, UniRef:UniRef50_A0AAI8DKM6, UniRef:UniRef90_A0AAI8DKM6 contig_1 cds 117937 119241 + GCA012955505_00144 feoB Nucleoside transporter/FeoB GTPase Gate domain-containing protein COG:COG0370, COG:P, SO:0001217, UniRef:UniRef50_A0A060PQ83, UniRef:UniRef90_A0A060PQ83 contig_1 cds 119526 119978 - GCA012955505_00145 IS6 family transposase GO:0004803, SO:0001217, UniParc:UPI0002F650A5, UniRef:UniRef100_A0A640N156, UniRef:UniRef50_A0A640N156, UniRef:UniRef90_A0A640N156 contig_1 cds 120000 120149 - GCA012955505_00146 tnp IS6 family transposase COG:COG3316, COG:X, GO:0003677, GO:0004803, GO:0006310, GO:0015074, GO:0032196, SO:0001217, UniParc:UPI0002DA0F59, UniRef:UniRef100_A0A640MZT2, UniRef:UniRef50_P0C1L0, UniRef:UniRef90_P0C1L0 contig_1 cds 120472 120612 + GCA012955505_00147 Bacteriocin RefSeq:WP_016931290.1, SO:0001217, UniParc:UPI000309E362, UniRef:UniRef100_A0A640MZ01, UniRef:UniRef50_A0A640MZ01, UniRef:UniRef90_A0A640MZ01 contig_1 cds 120659 120814 + GCA012955505_00148 Bacteriocin RefSeq:WP_016931291.1, SO:0001217, UniParc:UPI0002D5CBF5, UniRef:UniRef100_A0A640MZ50, UniRef:UniRef50_A0A640MZ50, UniRef:UniRef90_A0A640MZ50 contig_1 cds 120839 120973 + GCA012955505_00149 Bacteriocin RefSeq:WP_016931292.1, SO:0001217, UniParc:UPI000306EC5D, UniRef:UniRef100_A0A640MZY6, UniRef:UniRef50_A0A640MZY6, UniRef:UniRef90_A0A640MZY6 contig_1 cds 121094 121492 + GCA012955505_00150 cysteine peptidase family C39 domain-containing protein SO:0001217, UniRef:UniRef50_A0A0M2NZF1, UniRef:UniRef90_UPI000FF624BD contig_1 cds 121458 123212 + GCA012955505_00151 peptidase domain-containing ABC transporter SO:0001217, UniRef:UniRef50_UPI002E374B30, UniRef:UniRef90_UPI002E374B30 contig_1 cds 123720 123956 + GCA012955505_00152 hypothetical protein RefSeq:WP_016931295.1, SO:0001217, UniParc:UPI000307F171, UniRef:UniRef100_A0A640MZZ7, UniRef:UniRef50_A0A640MZZ7, UniRef:UniRef90_A0A640MZZ7 contig_1 cds 123965 125056 - GCA012955505_00153 tnp ISL3 family transposase GO:0004803, KEGG:K07485, SO:0001217, UniRef:UniRef50_A0A640MZ23, UniRef:UniRef90_UPI0018797981 contig_1 cds 125440 125940 - GCA012955505_00154 chromate transporter SO:0001217, UniRef:UniRef50_UPI0034E08B32 contig_1 cds 125987 126283 - GCA012955505_00155 (pseudo) chromate efflux transporter KEGG:K07240, SO:0001217, UniRef:UniRef50_UPI002175CC96, UniRef:UniRef90_UPI002175CC96 contig_1 cds 126588 126980 - GCA012955505_00156 arsC thioredoxin-dependent arsenate reductase COG:COG0394, COG:T, EC:1.20.4.4, GO:0004725, GO:0005737, GO:0030612, GO:0046685, KEGG:K03741, NCBIProtein:AAA25638.1, RefSeq:WP_016930481.1, SO:0001217, UniParc:UPI0002AB3B1E, UniRef:UniRef100_L7STI5, UniRef:UniRef50_Q49WS7, UniRef:UniRef90_Q49WS7 contig_1 cds 126998 128290 - GCA012955505_00157 arsB arsenite efflux transporter membrane subunit ArsB COG:COG1055, COG:P, GO:0005886, GO:0015105, GO:0015700, GO:0016020, GO:0046685, KEGG:K03893, NCBIProtein:AAA27588.1, RefSeq:WP_175406527.1, SO:0001217, UniParc:UPI000ADB275A, UniRef:UniRef100_UPI0018A6C37D, UniRef:UniRef50_Q5HF02, UniRef:UniRef90_Q8CQF4 contig_1 cds 128290 128604 - GCA012955505_00158 arsR ArsR family transcriptional regulator RefSeq:WP_016930483.1, SO:0001217, UniParc:UPI0002F19F4E, UniRef:UniRef100_A0A640N1A9, UniRef:UniRef50_P30338, UniRef:UniRef90_L7STF5 contig_1 cds 128942 129193 + GCA012955505_00159 hypothetical protein PFAM:PF04507.18 contig_1 cds 129211 129405 + GCA012955505_00160 Lipoprotein SO:0001217, UniRef:UniRef50_A0A380H3I8 contig_1 cds 129402 129569 + GCA012955505_00161 hypothetical protein RefSeq:WP_016930484.1, SO:0001217, UniParc:UPI0002D95544, UniRef:UniRef100_A0A640MZK1, UniRef:UniRef50_A0A380H5R5, UniRef:UniRef90_A0A640MZK1 contig_1 cds 129760 130647 + GCA012955505_00162 mscS Mechanosensitive ion channel family protein COG:COG0668, COG:M, RefSeq:WP_016930485.1, SO:0001217, UniParc:UPI0002F69A36, UniRef:UniRef100_A0A640N3Z7, UniRef:UniRef50_Q5HKC7, UniRef:UniRef90_Q5HKC7 contig_1 cds 130881 131069 + GCA012955505_00163 hypothetical protein RefSeq:WP_053020187.1, SO:0001217, UniParc:UPI00069CFFD0, UniRef:UniRef100_UPI00069CFFD0, UniRef:UniRef50_A0A640MZA4, UniRef:UniRef90_A0A640MZA4 contig_1 cds 131226 131639 + GCA012955505_00164 DUF3267 domain-containing protein SO:0001217, UniRef:UniRef50_UPI002DC039EF contig_1 cds 131713 132591 - GCA012955505_00165 yejR GTP-binding protein COG:COG0523, COG:R, RefSeq:WP_011274453.1, SO:0001217, UniParc:UPI000054B613, UniRef:UniRef100_L7STG1, UniRef:UniRef50_L7STG1, UniRef:UniRef90_L7STG1 contig_1 cds 132858 133841 + GCA012955505_00166 znuA ABC transporter substrate-binding protein COG:COG0803, COG:P, RefSeq:WP_011274454.1, SO:0001217, UniParc:UPI000054B614, UniRef:UniRef100_L7SZ77, UniRef:UniRef50_B9DL09, UniRef:UniRef90_L7SZ77 contig_1 cds 134016 134138 + GCA012955505_00167 LPXTG cell wall anchor domain-containing protein RefSeq:WP_016930490.1, SO:0001217, UniParc:UPI0002DA3EAA, UniRef:UniRef100_A0A640N047, UniRef:UniRef50_A0A023UEV9, UniRef:UniRef90_A0A023UEV9 contig_1 cds 134387 135814 + GCA012955505_00168 Serine protease SO:0001217, UniRef:UniRef50_A0A4Q7CJH2 contig_1 cds 135906 136418 - GCA012955505_00169 NAD(P)H-dependent oxidoreductase SO:0001217, UniRef:UniRef50_UPI00358DAF7F contig_1 cds 136509 136634 + GCA012955505_00170 tfoX TfoX N-terminal domain-containing protein SO:0001217, UniParc:UPI000054B619, UniRef:UniRef100_A0A640N1E2, UniRef:UniRef50_A0A640N1E2, UniRef:UniRef90_A0A640N1E2 contig_1 sorf 136725 136802 + GCA012955505_00171 Transcriptional regulator SO:0001217, UniParc:UPI000054B61A, UniRef:UniRef100_A0A2K0AXT7, UniRef:UniRef50_Q2G1R1, UniRef:UniRef90_A0A2K0AXT7 contig_1 cds 137015 138094 - GCA012955505_00172 argE putative succinyl-diaminopimelate desuccinylase COG:COG0624, COG:E, SO:0001217, UniRef:UniRef50_Q5HKI1, UniRef:UniRef90_A0A023UEW3 contig_1 cds 138326 139357 + GCA012955505_00173 pfoR Phosphotransferase system EIIC domain-containing protein COG:COG3641, COG:T, KEGG:K07035, SO:0001217, UniRef:UniRef50_S2XAU8, UniRef:UniRef90_Q4LA83 contig_1 cds 139780 140325 + GCA012955505_00174 TGS domain-containing protein SO:0001217, UniRef:UniRef50_UPI0015D8B55D contig_1 cds 140415 141692 + GCA012955505_00175 Threonine--tRNA ligase SO:0001217, UniRef:UniRef50_A0A972EF88 contig_1 cds 141832 142608 + GCA012955505_00176 rbbA ABC transporter ATP-binding protein COG:COG1131, COG:JV, SO:0001217, UniRef:UniRef50_A0A380FXA2, UniRef:UniRef90_A0A5B2YXC8 contig_1 cds 142595 143299 + GCA012955505_00177 ABC transporter permease RefSeq:WP_011274465.1, SO:0001217, UniParc:UPI000054B61F, UniRef:UniRef100_A0A640N023, UniRef:UniRef50_A0A5B2YXM7, UniRef:UniRef90_A0A5B2YXM7 contig_1 cds 143299 143787 + GCA012955505_00178 mepB MepB protein COG:COG4815, COG:K, SO:0001217, UniRef:UniRef50_A0A023UEW8, UniRef:UniRef90_A0A023UEW8 contig_1 cds 143844 144095 + GCA012955505_00179 (pseudo) hypothetical protein SO:0001217, UniRef:UniRef50_A0A2A1KD61, UniRef:UniRef50_UPI0008A158C3, UniRef:UniRef90_A0A2A1KD61, UniRef:UniRef90_UPI0008A158C3 contig_1 ncRNA 144185 144409 - GCA012955505_00180 S35 Staphylococcus sRNA 35 (srn_0335) RFAM:RF02894, SO:0000655 contig_1 cds 144548 144778 + GCA012955505_00181 (pseudo) acyltransferase family protein SO:0001217, UniRef:UniRef50_UPI0019D13A9D, UniRef:UniRef90_UPI00190AECF5 contig_1 cds 145081 145593 + GCA012955505_00182 yfiQ (pseudo) putative poly-beta-1,6-N-acetyl-D-glucosamine export protein COG:COG3936, COG:G, SO:0001217, UniRef:UniRef50_A0A239Y9Z9, UniRef:UniRef90_A0A2A1KDM2 contig_1 cds 145608 147503 + GCA012955505_00183 wcaA Glycosyltransferase family 2 protein COG:COG0463, COG:M, RefSeq:WP_011274469.1, SO:0001217, UniParc:UPI000054B623, UniRef:UniRef100_Q4LA76, UniRef:UniRef50_Q4LA76, UniRef:UniRef90_Q4LA76 contig_1 cds 147707 148636 - GCA012955505_00184 mntC manganese ABC transporter substrate-binding lipoprotein MntC COG:COG0803, COG:P, EC:7.2.2.5, GO:0015410, RefSeq:WP_011274470.1, SO:0001217, UniParc:UPI000054B624, UniRef:UniRef100_A0A640N068, UniRef:UniRef50_S2YNP1, UniRef:UniRef90_A0A380FXW2 contig_1 cds 148633 149469 - GCA012955505_00185 znuB Metal ABC transporter permease COG:COG1108, COG:P, KEGG:K19976, RefSeq:WP_011274471.1, SO:0001217, UniParc:UPI000054B625, UniRef:UniRef100_A0A640N1H6, UniRef:UniRef50_S2XTU7, UniRef:UniRef90_A0A4Z1BGW1 contig_1 cds 149462 150205 - GCA012955505_00186 znuC ABC transporter domain-containing protein COG:COG1121, COG:P, RefSeq:WP_033079596.1, SO:0001217, UniParc:UPI0004453818, UniRef:UniRef100_A0A028ZL45, UniRef:UniRef50_A0A240BUN7, UniRef:UniRef90_Q4LA73 contig_1 cds 150464 151663 + GCA012955505_00187 yejR CobW C-terminal domain-containing protein COG:COG0523, COG:R, RefSeq:WP_016930500.1, SO:0001217, UniParc:UPI0002E77D75, UniRef:UniRef100_A0A640MZR2, UniRef:UniRef50_P94400, UniRef:UniRef90_Q4LA72 contig_1 cds 151888 153249 + GCA012955505_00188 brnQ branched-chain amino acid transport system II carrier protein COG:COG1114, COG:E, GO:0015658, GO:0015803, GO:0016020, KEGG:K03311, RefSeq:WP_016930501.1, SO:0001217, UniParc:UPI0002FC2BB0, UniRef:UniRef100_A0A640N460, UniRef:UniRef50_A0A133CF62, UniRef:UniRef90_A0A380FV75 contig_1 cds 153605 154297 + GCA012955505_00189 ubiE Class I SAM-dependent methyltransferase COG:COG2226, COG:HJ, RefSeq:WP_011274475.1, SO:0001217, UniParc:UPI000054B629, UniRef:UniRef100_A0A640MZG5, UniRef:UniRef50_A0A380FWJ4, UniRef:UniRef90_A0AAX0ZEX8 contig_1 cds 154294 155847 + GCA012955505_00190 ddpA Nickel ABC transporter COG:COG0747, COG:E, RefSeq:WP_016930502.1, SO:0001217, UniParc:UPI0002FF740F, UniRef:UniRef100_A0A640N054, UniRef:UniRef50_A0A5B2Z578, UniRef:UniRef90_A0A1B1UYM5 contig_1 cds 155850 156806 + GCA012955505_00191 dppB ABC transmembrane type-1 domain-containing protein COG:COG0601, COG:EP, RefSeq:WP_016930503.1, SO:0001217, UniParc:UPI0002DEA150, UniRef:UniRef100_A0A640MZD4, UniRef:UniRef50_Q4LA68, UniRef:UniRef90_Q4LA68 contig_1 cds 156806 157573 + GCA012955505_00192 dppC ABC transmembrane type-1 domain-containing protein COG:COG1173, COG:EP, RefSeq:WP_011274478.1, SO:0001217, UniParc:UPI000054B62C, UniRef:UniRef100_A0A640N5G9, UniRef:UniRef50_A0A853V2J3, UniRef:UniRef90_A0A2K0AXZ2 contig_1 cds 157540 158307 + GCA012955505_00193 dppD Oligopeptide ABC superfamily ATP binding cassette transporter COG:COG0444, COG:EP, RefSeq:WP_011274479.1, SO:0001217, UniParc:UPI000054B62D, UniRef:UniRef100_A0A640N0A6, UniRef:UniRef50_A0A380FWY4, UniRef:UniRef90_A0A1B1UYP2 contig_1 cds 158300 158935 + GCA012955505_00194 dppF ABC transporter domain-containing protein COG:COG1124, COG:EP, RefSeq:WP_016930504.1, SO:0001217, UniParc:UPI0002D445DC, UniRef:UniRef100_A0A640N099, UniRef:UniRef50_A0A380FXX1, UniRef:UniRef90_Q4LA65 contig_1 cds 158994 160166 + GCA012955505_00195 araJ Major facilitator superfamily (MFS) profile domain-containing protein COG:COG2814, COG:G, RefSeq:WP_016930505.1, SO:0001217, UniParc:UPI000312120B, UniRef:UniRef100_A0A640N1L1, UniRef:UniRef50_B9DJ45, UniRef:UniRef90_A0A1B1UYK3 contig_1 cds 160321 160545 + GCA012955505_00196 DUF1447 domain-containing protein RefSeq:WP_011274482.1, SO:0001217, UniParc:UPI000054B630, UniRef:UniRef100_A0A640N0P3, UniRef:UniRef50_A0A1J6DV39, UniRef:UniRef90_A0A2K0AYW2 contig_1 cds 160655 161515 + GCA012955505_00197 rssA PNPLA domain-containing protein COG:COG1752, COG:R, RefSeq:WP_016930506.1, SO:0001217, UniParc:UPI0002E1B9FC, UniRef:UniRef100_A0A640MZU9, UniRef:UniRef50_A0A151A3F7, UniRef:UniRef90_A0A1B1UYL4 contig_1 cds 161624 162334 - GCA012955505_00198 uhpC Major facilitator superfamily (MFS) profile domain-containing protein COG:COG2271, COG:G, RefSeq:WP_016930507.1, SO:0001217, UniParc:UPI000301942D, UniRef:UniRef100_A0A640N488, UniRef:UniRef50_Q4LA61, UniRef:UniRef90_Q4LA61 contig_1 cds 162374 162949 - GCA012955505_00199 Major facilitator superfamily (MFS) profile domain-containing protein RefSeq:WP_016930508.1, SO:0001217, UniParc:UPI0002D51E47, UniRef:UniRef100_A0A640MZJ5, UniRef:UniRef50_A0A640MZJ5, UniRef:UniRef90_A0A640MZJ5 contig_1 cds 163092 163523 + GCA012955505_00200 soxR MerR family transcriptional regulator COG:COG0789, COG:K, KEGG:K21745, RefSeq:WP_011274485.1, SO:0001217, UniParc:UPI000054B633, UniRef:UniRef100_A0A640N084, UniRef:UniRef50_R2R848, UniRef:UniRef90_A0A640N084 contig_1 cds 163542 163973 + GCA012955505_00201 queD 6-carboxy-5,6,7,8-tetrahydropterin synthase COG:COG0720, COG:H, EC:4.1.2.50, EC:4.2.3.12, KEGG:K01737, RefSeq:WP_016930509.1, SO:0001217, UniParc:UPI00030A8C8D, UniRef:UniRef100_A0A023UGN4, UniRef:UniRef50_Q4LA59, UniRef:UniRef90_Q4LA59 contig_1 cds 164088 165038 + GCA012955505_00202 mpfA HlyC/CorC family transporter COG:COG1253, COG:PT, KEGG:K03699, SO:0001217, UniRef:UniRef50_Q49W51, UniRef:UniRef90_Q4LA58 contig_1 cds 165150 166199 + GCA012955505_00203 hrtB Putative hemin transport system permease protein HrtB SO:0001217, UniRef:UniRef50_Q2G168 contig_1 cds 166212 166541 + GCA012955505_00204 (pseudo) ABC transporter ATP-binding protein SO:0001217, UniRef:UniRef50_UPI000A6F9BED, UniRef:UniRef90_UPI000A6F9BED contig_1 cds 166549 166845 + GCA012955505_00205 hrtA (pseudo) Putative hemin import ATP-binding protein HrtA SO:0001217, UniRef:UniRef50_A0A0Z8E1V8, UniRef:UniRef90_A0A380FUS3 contig_1 cds 166912 167091 - GCA012955505_00206 hypothetical protein contig_1 cds 167384 168202 - GCA012955505_00207 D-serine D-alanine glycine transporter SO:0001217, UniRef:UniRef50_A0A380FDZ3 contig_1 cds 168569 169192 + GCA012955505_00208 nfnB Putative NAD(P)H nitroreductase COG:C, COG:COG0778, RefSeq:WP_011274493.1, SO:0001217, UniParc:UPI000054B63B, UniRef:UniRef100_A0A640N4B9, UniRef:UniRef50_A0A653LRS5, UniRef:UniRef90_A0A380FXY1 contig_1 cds 169525 169884 + GCA012955505_00209 Metallo-beta-lactamase domain-containing protein RefSeq:WP_011274494.1, SO:0001217, UniParc:UPI000054B63C, UniRef:UniRef100_A0A640MZM5, UniRef:UniRef50_A0A7Z1N806, UniRef:UniRef90_A0A7Z1N806 contig_1 cds 170127 170663 + GCA012955505_00210 gloA VOC family protein COG:COG0346, COG:Q, RefSeq:WP_011274495.1, SO:0001217, UniParc:UPI000054B63D, UniRef:UniRef100_A0A640MZI7, UniRef:UniRef50_B9DIF5, UniRef:UniRef90_A0A5B2YZV3 contig_1 cds 170914 171201 + GCA012955505_00211 Phage gp6-like head-tail connector protein RefSeq:WP_011274496.1, SO:0001217, UniParc:UPI000054B63E, UniRef:UniRef100_A0A640N5M9, UniRef:UniRef50_A0A974KXE8, UniRef:UniRef90_A0A2K0AYV0 contig_1 cds 171436 173682 - GCA012955505_00212 lip YSIRK-targeted triacylglycerol lipase COG:COG1075, COG:I, EC:3.1.1.3, GO:0005509, GO:0016298, RefSeq:WP_011274497.1, SO:0001217, UniParc:UPI000054B63F, UniRef:UniRef100_Q4LA48, UniRef:UniRef50_Q6GDD3, UniRef:UniRef90_Q4LA48 contig_1 tRNA 174053 174142 - GCA012955505_00213 trnI tRNA-Ile(tat) SO:0000263 contig_1 cds 174355 175218 + GCA012955505_00214 Serine protease RefSeq:WP_037558267.1, SO:0001217, UniParc:UPI000448AD26, UniRef:UniRef100_A0A028ZLW2, UniRef:UniRef50_A0A4V6KKK7, UniRef:UniRef90_Q4LA46 contig_1 cds 175289 176485 + GCA012955505_00215 Lipoprotein SO:0001217, UniRef:UniRef50_A0A023UFN5, UniRef:UniRef90_A0A023UFN5 contig_1 cds 176680 177453 - GCA012955505_00216 yobV WYL domain-containing protein COG:COG2378, COG:K, SO:0001217, UniRef:UniRef50_Q4LA43, UniRef:UniRef90_Q4LA43 contig_1 cds 177647 178624 + GCA012955505_00217 purR HTH lacI-type domain-containing protein COG:COG1609, COG:K, SO:0001217, UniRef:UniRef50_Q4LA42, UniRef:UniRef90_Q4LA42 contig_1 cds 178624 179505 + GCA012955505_00218 rbsK ribokinase COG:COG0524, COG:G, EC:2.7.1.15, GO:0004747, GO:0006014, KEGG:K00852, RefSeq:WP_049426630.1, SO:0001217, UniParc:UPI00066E5943, UniRef:UniRef100_UPI00211ACA28, UniRef:UniRef50_A0A2M9MWI4, UniRef:UniRef90_A0A640N0G4 contig_1 cds 179498 179887 + GCA012955505_00219 rbsD D-ribose pyranase COG:COG1869, COG:G, EC:5.4.99.62, GO:0005829, GO:0016872, GO:0019303, GO:0048029, GO:0062193, KEGG:K06726, RefSeq:WP_011274505.1, SO:0001217, UniParc:UPI000054B647, UniRef:UniRef100_Q4LA40, UniRef:UniRef50_Q9CF43, UniRef:UniRef90_Q4LA40 contig_1 cds 179900 181396 + GCA012955505_00220 ccmA heme ABC exporter ATP-binding protein CcmA COG:COG1129, COG:G, EC:7.6.2.5, GO:0015439, GO:0015886, GO:0017004, GO:0022857, GO:0043190, RefSeq:WP_049426629.1, SO:0001217, UniParc:UPI00066E21A0, UniRef:UniRef100_UPI00066E21A0, UniRef:UniRef50_Q81V36, UniRef:UniRef90_Q4LA39 contig_1 cds 181377 182315 + GCA012955505_00221 araH Ribose ABC transporter permease COG:COG1172, COG:G, RefSeq:WP_011274507.1, SO:0001217, UniParc:UPI000054B649, UniRef:UniRef100_A0A640N011, UniRef:UniRef50_P36948, UniRef:UniRef90_A0A7Z1SF76 contig_1 cds 182335 183252 + GCA012955505_00222 rbsB Ribose ABC transporter (Ribose-binding protein) COG:COG1879, COG:G, RefSeq:WP_016930525.1, SO:0001217, UniParc:UPI0002E5F0AF, UniRef:UniRef100_A0A640N4G1, UniRef:UniRef50_E4LAP5, UniRef:UniRef90_Q4LA37 contig_1 cds 183471 184154 - GCA012955505_00223 panE oxidoreductase COG:COG1893, COG:H, SO:0001217, UniRef:UniRef50_A0A0J9X283, UniRef:UniRef90_Q4LA36 contig_1 cds 184425 184955 + GCA012955505_00224 3-methyl-2-oxobutanoate hydroxymethyltransferase SO:0001217, UniRef:UniRef50_UPI00024F168E contig_1 cds 184946 185245 + GCA012955505_00225 3-methyl-2-oxobutanoate hydroxymethyltransferase SO:0001217, UniRef:UniRef50_UPI00226DFDCE contig_1 cds 185238 186089 + GCA012955505_00226 panC pantoate--beta-alanine ligase COG:COG0414, COG:H, EC:6.3.2.1, GO:0004592, GO:0005524, GO:0005829, GO:0015940, KEGG:K01918, RefSeq:WP_016930527.1, SO:0001217, UniParc:UPI0002FB7EB4, UniRef:UniRef100_A0A1C2F691, UniRef:UniRef50_Q8CX59, UniRef:UniRef90_Q4LA34 contig_1 cds 186096 186479 + GCA012955505_00227 panD aspartate 1-decarboxylase COG:COG0853, COG:H, EC:4.1.1.11, GO:0004068, GO:0005829, GO:0006523, GO:0015940, KEGG:K01579, RefSeq:WP_011274512.1, SO:0001217, UniParc:UPI000054B64E, UniRef:UniRef100_Q4LA33, UniRef:UniRef50_Q8CVE9, UniRef:UniRef90_Q4LA33 contig_1 cds 186692 187555 + GCA012955505_00228 Lipoprotein RefSeq:WP_049426627.1, SO:0001217, UniParc:UPI00066EA079, UniRef:UniRef100_UPI0034D79242, UniRef:UniRef50_A0A4Z1C3N7, UniRef:UniRef90_A0AB38PGK1 contig_1 cds 187584 188261 - GCA012955505_00229 ldcB D-alanyl-D-alanine carboxypeptidase COG:COG1876, COG:M, RefSeq:WP_046464635.1, SO:0001217, UniParc:UPI000623FD29, UniRef:UniRef100_UPI000AC583EE, UniRef:UniRef50_A0A2T4PU68, UniRef:UniRef90_A0A7Z1N5U4 contig_1 cds 188450 188764 + GCA012955505_00230 MurR/RpiR family transcriptional regulator SO:0001217, UniRef:UniRef50_UPI00066047AF, UniRef:UniRef90_UPI00066047AF contig_1 cds 188825 189211 + GCA012955505_00231 (pseudo) hypothetical protein SO:0001217, UniRef:UniRef50_UPI000D1DA147, UniRef:UniRef90_UPI000D1DA147 contig_1 cds 189498 189605 + GCA012955505_00232 hypothetical protein contig_1 cds 189742 190293 + GCA012955505_00233 yhaH DUF805 domain-containing protein COG:COG3152, COG:S, RefSeq:WP_011274524.1, SO:0001217, UniParc:UPI000054B65A, UniRef:UniRef100_A0A640N0K1, UniRef:UniRef50_A0A2K0AY08, UniRef:UniRef90_A0A2K0AY08 contig_1 cds 190383 191564 - GCA012955505_00234 yeiB DUF418 domain-containing protein COG:COG2311, COG:S, KEGG:K07148, RefSeq:WP_016930538.1, SO:0001217, UniParc:UPI00030F9AD4, UniRef:UniRef100_A0A023UGC6, UniRef:UniRef50_Q4LA20, UniRef:UniRef90_Q4LA20 contig_1 cds 191730 193337 - GCA012955505_00235 mutS DNA mismatch repair protein MutS COG:COG0249, COG:L, RefSeq:WP_016930539.1, SO:0001217, UniParc:UPI00030B8136, UniRef:UniRef100_A0A023UGS1, UniRef:UniRef50_G5JKS6, UniRef:UniRef90_Q4LA19 contig_1 ncRNA-region 193489 193591 + azaaromatic riboswitch aptamer (yjdF RNA) RFAM:RF01764, SO:0000035 contig_1 cds 193609 194013 + GCA012955505_00236 DUF2992 domain-containing protein RefSeq:WP_011274527.1, SO:0001217, UniParc:UPI000054B65D, UniRef:UniRef100_A0A640N0P0, UniRef:UniRef50_A0A853V5R9, UniRef:UniRef90_A0A640N0P0 contig_1 cds 194234 195523 + GCA012955505_00237 arsB arsenite efflux transporter membrane subunit ArsB COG:COG1055, COG:P, GO:0015105, GO:0015700, GO:0016020, KEGG:K03893, NCBIFam:NF033877.0, RefSeq:WP_049426641.1, SO:0001217, UniParc:UPI00066A74B0, UniRef:UniRef100_A0A7Z1N6W5, UniRef:UniRef50_Q5HF02, UniRef:UniRef90_A0A5B2Z5B0 contig_1 cds 196018 196236 + GCA012955505_00238 NAD(P)H-dependent oxidoreductase SO:0001217, UniRef:UniRef50_X4ZVG7, UniRef:UniRef90_UPI002887C1E9 contig_1 cds 196256 196720 + GCA012955505_00239 NAD(P)H-dependent oxidoreductase RefSeq:WP_260846046.1, SO:0001217, UniParc:UPI001462E85A, UniRef:UniRef100_UPI001462E85A, UniRef:UniRef50_UPI0034D6D273, UniRef:UniRef90_UPI0034D6D273 contig_1 cds 196903 197040 + GCA012955505_00240 hypothetical protein contig_1 cds 197074 198285 + GCA012955505_00241 Short-chain fatty acids transporter SO:0001217, UniRef:UniRef50_Q4A0C6 contig_1 cds 198551 198748 + GCA012955505_00242 (pseudo) hypothetical protein SO:0001217, UniRef:UniRef50_A0A6N0I2K8, UniRef:UniRef90_A0A640N223 contig_1 cds 199483 199743 + GCA012955505_00243 hypothetical protein contig_1 cds 199700 199951 + GCA012955505_00244 hypothetical protein contig_1 cds 200069 200998 + GCA012955505_00245 (pseudo) ATPase SO:0001217, UniRef:UniRef50_A0A380GK46, UniRef:UniRef90_A0A640N0C0 contig_1 cds 201001 201672 + GCA012955505_00246 (pseudo) ATPase SO:0001217, UniRef:UniRef50_A0A380GK46, UniRef:UniRef90_A0A640N0C0 contig_1 cds 201672 202433 + GCA012955505_00247 narK (pseudo) MFS transporter COG:COG2223, COG:P, SO:0001217, UniRef:UniRef50_A0AAE3F5E6, UniRef:UniRef90_A0A2A1KCZ7 contig_1 cds 202433 202894 + GCA012955505_00248 rbtT RbtT protein SO:0001217, UniRef:UniRef50_U3U0Y9 contig_1 cds 202909 203691 + GCA012955505_00249 fabG Putative short chain dehydrogenase COG:COG1028, COG:I, RefSeq:WP_011274539.1, SO:0001217, UniParc:UPI000054B669, UniRef:UniRef100_A0A7T8UVM8, UniRef:UniRef50_A0A1X7EQ36, UniRef:UniRef90_A0A380FUV4 contig_1 cds 203921 205624 + GCA012955505_00250 ATPase COG:COG3044, COG:R, RefSeq:WP_049426107.1, SO:0001217, UniParc:UPI00066D03A2, UniRef:UniRef100_UPI00066D03A2, UniRef:UniRef50_U2V923, UniRef:UniRef90_Q4LA05 contig_1 cds 205677 206075 - GCA012955505_00251 hypothetical protein RefSeq:WP_011274541.1, SO:0001217, UniParc:UPI000054B66B, UniRef:UniRef100_A0A7Z1N673, UniRef:UniRef50_A0A7Z1N673, UniRef:UniRef90_A0A7Z1N673 contig_1 cds 206226 207884 - GCA012955505_00252 FAD-binding dehydrogenase COG:COG3573, COG:R, GO:0016627, KEGG:K07077, RefSeq:WP_053037729.1, SO:0001217, UniParc:UPI00069EA1D1, UniRef:UniRef100_UPI00069EA1D1, UniRef:UniRef50_A0A561U3B5, UniRef:UniRef90_A0A380FY10 contig_1 cds 208045 209427 + GCA012955505_00253 adhE Succinate-semialdehyde dehydrogenase COG:COG1012, COG:I, RefSeq:WP_011274543.1, SO:0001217, UniParc:UPI000054B66D, UniRef:UniRef100_A0A640N4T4, UniRef:UniRef50_A0A7W5Z7G1, UniRef:UniRef90_A0A380FVX8 contig_1 cds 209598 210671 + GCA012955505_00254 tdh Sorbitol dehydrogenase COG:COG1063, COG:ER, RefSeq:WP_011274544.1, SO:0001217, UniParc:UPI000054B66E, UniRef:UniRef100_A0A640N039, UniRef:UniRef50_Q06004, UniRef:UniRef90_A0A380FV37 contig_1 cds 210851 211291 + GCA012955505_00255 marR MarR family transcriptional regulator COG:COG1846, COG:K, RefSeq:WP_011274545.1, SO:0001217, UniParc:UPI000054B66F, UniRef:UniRef100_A0A640N0S5, UniRef:UniRef50_Q49WS5, UniRef:UniRef90_A0A5B2Z4K9 contig_1 cds 211308 211682 + GCA012955505_00256 hypothetical protein PFAM:PF07992.20, PFAM:PF13450.12 contig_1 cds 211821 212177 + GCA012955505_00257 Dihydrolipoamide dehydrogenase SO:0001217, UniRef:UniRef50_A0A380FMB4 contig_1 cds 212283 212462 - GCA012955505_00258 hypothetical protein contig_1 cds 212540 212971 - GCA012955505_00259 yajL (pseudo) Type 1 glutamine amidotransferase domain-containing protein COG:COG0693, COG:V, SO:0001217, UniRef:UniRef50_A0A380FVZ3, UniRef:UniRef90_A0A2K0AY17 contig_1 cds 213140 213580 + GCA012955505_00260 DUF308 domain-containing protein SO:0001217, UniRef:UniRef50_UPI00332900E8 contig_1 cds 213734 214930 + GCA012955505_00261 malY 3M3SH-releasing C-S lyase BlastRules:WP_087436684, COG:COG1168, COG:ER, RefSeq:WP_016930549.1, SO:0001217, UniParc:UPI0002DFCD37, UniRef:UniRef100_A0A2A1KDF6, UniRef:UniRef50_A0A380FVC9, UniRef:UniRef90_A0A2A1KDF6 contig_1 cds 214945 215352 + GCA012955505_00262 yciW Alkylhydroperoxidase COG:COG2128, COG:P, RefSeq:WP_011274551.1, SO:0001217, UniParc:UPI000054B675, UniRef:UniRef100_A0A640N060, UniRef:UniRef50_Q65N92, UniRef:UniRef90_A0A640N060 contig_1 cds 215601 216980 + GCA012955505_00263 lpdA dihydrolipoyl dehydrogenase COG:C, COG:COG1249, EC:1.8.1.4, GO:0004148, GO:0050660, SO:0001217, UniRef:UniRef50_A0A7Z1N6F1, UniRef:UniRef90_A0A7Z1N6F1 contig_1 cds 217019 217966 + GCA012955505_00264 acoA ABC transporter substrate-binding protein COG:C, COG:COG1071, RefSeq:WP_011274553.1, SO:0001217, UniParc:UPI000054B677, UniRef:UniRef100_A0A640N298, UniRef:UniRef50_A0A0B7GQJ1, UniRef:UniRef90_A0A853V6A6 contig_1 cds 217982 219022 + GCA012955505_00265 acoB Pyruvate dehydrogenase E1 component subunit beta COG:C, COG:COG0022, RefSeq:WP_011274554.1, SO:0001217, UniParc:UPI000054B678, UniRef:UniRef100_A0A2A1KEY8, UniRef:UniRef50_P27746, UniRef:UniRef90_A0A2A1KEY8 contig_1 cds 219041 220339 + GCA012955505_00266 aceF Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex COG:C, COG:COG0508, RefSeq:WP_011274555.1, SO:0001217, UniParc:UPI000054B679, UniRef:UniRef100_Q4L9Z0, UniRef:UniRef50_Q5HKM0, UniRef:UniRef90_Q4L9Z0 contig_1 cds 220617 221981 + GCA012955505_00267 lpdA dihydrolipoyl dehydrogenase COG:C, COG:COG1249, EC:1.8.1.4, GO:0004148, GO:0050660, KEGG:K00382, SO:0001217, UniRef:UniRef50_A0A7Z1N6F1, UniRef:UniRef90_A0A2K0AY27 contig_1 cds 222415 222753 + GCA012955505_00268 padR Transcription regulator PadR N-terminal domain-containing protein COG:COG1695, COG:K, RefSeq:WP_011274557.1, SO:0001217, UniParc:UPI000054B67B, UniRef:UniRef100_Q4L9Y8, UniRef:UniRef50_Q2FUS4, UniRef:UniRef90_Q4L9Y8 contig_1 cds 222743 223504 + GCA012955505_00269 DUF1129 domain-containing protein SO:0001217, UniRef:UniRef50_A0A7Z1N6M2, UniRef:UniRef90_A0A7Z1N6M2 contig_1 cds 223591 224349 - GCA012955505_00270 fabG 3-oxoacyl-ACP reductase COG:COG1028, COG:I, RefSeq:WP_080004919.1, SO:0001217, UniParc:UPI0002FB07C0, UniRef:UniRef100_Q4L9Y6, UniRef:UniRef50_Q4L9Y6, UniRef:UniRef90_Q4L9Y6 contig_1 cds 224968 225354 - GCA012955505_00271 (pseudo) mannitol-1-phosphate 5-dehydrogenase EC:1.1.1.17, KEGG:K00009, SO:0001217, UniRef:UniRef50_UPI0019095082, UniRef:UniRef90_UPI0019095082 contig_1 cds 225308 225508 - GCA012955505_00272 hypothetical protein PFAM:PF01232.29 contig_1 cds 225508 225942 - GCA012955505_00273 mtlA2 Mannitol-specific phosphotransferase enzyme IIA component COG:COG4668, COG:G, RefSeq:WP_016930557.1, SO:0001217, UniParc:UPI000300B5BB, UniRef:UniRef100_A0A640N0A2, UniRef:UniRef50_P17876, UniRef:UniRef90_A0A2J9X0S9 contig_1 cds 225954 226295 - GCA012955505_00274 (pseudo) PTS sugar transporter subunit IIA SO:0001217, UniRef:UniRef50_UPI002A815178, UniRef:UniRef90_UPI002A815178 contig_1 cds 226280 227980 - GCA012955505_00275 bglG Transcriptional antiterminator COG:COG3711, COG:K, KEGG:K03483, SO:0001217, UniRef:UniRef50_A0A0D6H7E9, UniRef:UniRef90_Q4L9Y2 contig_1 cds 228053 229612 - GCA012955505_00276 mtlA PTS system mannitol-specific EIICB component COG:COG2213, COG:G, EC:2.7.1.197, GO:0005886, GO:0009401, GO:0016301, GO:0022872, GO:0090563, KEGG:K02800, RefSeq:WP_011274564.1, SO:0001217, UniParc:UPI000054B682, UniRef:UniRef100_Q4L9Y1, UniRef:UniRef50_P28008, UniRef:UniRef90_Q4L9Y1 contig_1 cds 229948 230082 + GCA012955505_00277 hypothetical protein contig_1 cds 230330 230740 + GCA012955505_00278 eamA EamA family transporter SO:0001217, UniRef:UniRef50_UPI0015B380C4 contig_1 cds 230773 231240 + GCA012955505_00279 rarD (pseudo) EamA family transporter RarD COG:COG2962, COG:R, GO:0005215, GO:0005886, GO:0006810, SO:0001217, UniRef:UniRef50_Q2FUS1, UniRef:UniRef90_Q4L9X9 contig_1 ncRNA 231262 231469 - GCA012955505_00280 S35 Staphylococcus sRNA 35 (srn_0335) RFAM:RF02894, SO:0000655 contig_1 cds 231528 231734 - GCA012955505_00281 Lipoprotein SO:0001217, UniRef:UniRef50_A0A640N0C3 contig_1 cds 231926 232324 + GCA012955505_00282 hypothetical protein PFAM:PF18674.7, SO:0001217, UniRef:UniRef50_UPI001D13BCD2, UniRef:UniRef90_UPI001D13BCD2 contig_1 cds 232377 233429 + GCA012955505_00283 CDP-glycerol glycerophosphotransferase family protein SO:0001217, UniRef:UniRef50_UPI000D4EB4DD contig_1 cds 233661 234053 + GCA012955505_00284 hypothetical protein contig_1 cds 234181 234621 + GCA012955505_00285 (pseudo) CDP-glycerol glycerophosphotransferase family protein SO:0001217, UniRef:UniRef50_UPI002A35CD8A, UniRef:UniRef90_UPI003524C4EE contig_1 cds 234907 235518 + GCA012955505_00286 stage II sporulation protein M KEGG:K06384, SO:0001217, UniRef:UniRef50_Q4L9X6, UniRef:UniRef90_UPI00265B829F contig_1 gap 235475 235484 . contig_1 cds 235701 238349 + GCA012955505_00287 choice-of-anchor I family protein SO:0001217, UniRef:UniRef50_UPI0024831E8D, UniRef:UniRef90_UPI000A67BFAB contig_1 cds 238684 239292 - GCA012955505_00288 ABC transporter substrate-binding protein SO:0001217, UniRef:UniRef50_UPI0021E87D44 contig_1 ncRNA-region 239350 239452 - TPP riboswitch aptamer (THI element) RFAM:RF00059, SO:0000035 contig_1 cds 239632 239970 + GCA012955505_00289 hipB HTH cro/C1-type domain-containing protein COG:COG1396, COG:K, RefSeq:WP_033079800.1, SO:0001217, UniParc:UPI00051A189E, UniRef:UniRef100_A0A640N0H1, UniRef:UniRef50_Q4L9W9, UniRef:UniRef90_Q4L9W9 contig_1 cds 240008 240844 + GCA012955505_00290 ydiL CPBP family intramembrane metalloprotease COG:COG1266, COG:O, RefSeq:WP_011274577.1, SO:0001217, UniParc:UPI000054B68F, UniRef:UniRef100_Q4L9W8, UniRef:UniRef50_Q4L9W8, UniRef:UniRef90_Q4L9W8 contig_1 cds 240921 241031 + GCA012955505_00291 hypothetical protein contig_1 cds 241187 241300 + GCA012955505_00292 hypothetical protein contig_1 cds 241328 241483 + GCA012955505_00293 (pseudo) NAD(P)H-dependent oxidoreductase SO:0001217, UniRef:UniRef50_UPI001F0ABA03, UniRef:UniRef90_UPI001F0ABA03 contig_1 cds 241580 241696 + GCA012955505_00294 CPBP family intramembrane metalloprotease SO:0001217, UniParc:UPI000054B692, UniRef:UniRef100_A0A5B2Z226, UniRef:UniRef50_A0A5B2Z226, UniRef:UniRef90_A0A5B2Z226 contig_1 cds 241999 242340 + GCA012955505_00295 hypothetical protein SO:0001217, UniRef:UniRef50_A0A2K0AYF3 contig_1 cds 242425 242898 + GCA012955505_00296 CPBP family intramembrane metalloprotease SO:0001217, UniRef:UniRef50_Q4L9W2 contig_1 cds 242858 243190 + GCA012955505_00297 type II CAAX prenyl endopeptidase Rce1 family protein SO:0001217, UniRef:UniRef50_UPI002552867C, UniRef:UniRef90_UPI002552867C contig_1 cds 243343 243747 + GCA012955505_00298 tM2 HTH cro/C1-type domain-containing protein COG:COG2314, COG:R, RefSeq:WP_080365818.1, SO:0001217, UniParc:UPI0009B2C08A, UniRef:UniRef100_A0A640N194, UniRef:UniRef50_Q4L9W0, UniRef:UniRef90_Q4L9W0 contig_1 cds 244294 245325 + GCA012955505_00299 frwC PTS sugar transporter subunit IIC COG:COG1299, COG:G, RefSeq:WP_037558241.1, SO:0001217, UniParc:UPI0004458D40, UniRef:UniRef100_A0A640N6E8, UniRef:UniRef50_K9ANZ7, UniRef:UniRef90_A0A657ZS02 contig_1 cds 245513 246232 + GCA012955505_00300 argF (pseudo) ornithine carbamoyltransferase COG:COG0078, COG:E, EC:2.1.3.3, GO:0004585, GO:0005737, GO:0006526, GO:0016597, GO:0019240, GO:0042450, SO:0001217, UniRef:UniRef50_P08308, UniRef:UniRef90_Q8CU41 contig_1 cds 246174 246419 + GCA012955505_00301 hypothetical protein PFAM:PF00185.30 contig_1 cds 246438 247367 + GCA012955505_00302 arcC carbamate kinase COG:COG0549, COG:E, EC:2.7.2.2, GO:0005524, GO:0005829, GO:0006520, GO:0008804, GO:0019546, RefSeq:WP_011274588.1, SO:0001217, UniParc:UPI0000E8AB39, UniRef:UniRef100_Q4L9V7, UniRef:UniRef50_Q4L9V7, UniRef:UniRef90_Q4L9V7 contig_1 cds 247815 248003 - GCA012955505_00303 xRE Transcriptional regulator COG:COG1476, COG:K, RefSeq:WP_016930575.1, SO:0001217, UniParc:UPI0003006918, UniRef:UniRef100_A0A640N1E0, UniRef:UniRef50_Q24QX8, UniRef:UniRef90_A0A4Z1B1D3 contig_1 cds 248195 248341 - GCA012955505_00304 (pseudo) Membrane protein SO:0001217, UniRef:UniRef50_A0A380FX61, UniRef:UniRef90_UPI00265BA8ED contig_1 cds 248533 249555 - GCA012955505_00305 lplA lipoate--protein ligase COG:COG0095, COG:H, RefSeq:WP_046308894.1, SO:0001217, UniParc:UPI00061A1DF7, UniRef:UniRef100_A0A640N5B2, UniRef:UniRef50_A0A0H3JX98, UniRef:UniRef90_A0A380FY64 contig_1 cds 249567 250481 - GCA012955505_00306 sIR2 Deacetylase SIR2 COG:COG0846, COG:O, RefSeq:WP_011274593.1, SO:0001217, UniParc:UPI000054B69F, UniRef:UniRef100_A0A640N0M4, UniRef:UniRef50_P0DN71, UniRef:UniRef90_A0A2K0AY47 contig_1 cds 250465 251262 - GCA012955505_00307 ymdB protein-ADP-ribose hydrolase COG:COG2110, COG:J, RefSeq:WP_145463188.1, SO:0001217, UniParc:UPI00119FEB5D, UniRef:UniRef100_UPI00119FEB5D, UniRef:UniRef50_P67343, UniRef:UniRef90_A0A2K0AY48 contig_1 cds 251263 251604 - GCA012955505_00308 gcvH Glycine cleavage system H protein COG:COG0509, COG:E, RefSeq:WP_011274595.1, SO:0001217, UniParc:UPI000054B6A1, UniRef:UniRef100_A0A640N5C0, UniRef:UniRef50_P0DN69, UniRef:UniRef90_A0A380FV80 contig_1 cds 251626 252627 - GCA012955505_00309 ssuD LLM class flavin-dependent oxidoreductase COG:COG2141, COG:HR, RefSeq:WP_011274596.1, SO:0001217, UniParc:UPI000054B6A2, UniRef:UniRef100_A0A7Z1SC54, UniRef:UniRef50_A0A390B198, UniRef:UniRef90_A0A7Z1SC54 contig_1 cds 252868 254061 + GCA012955505_00310 fadH NADH-dependent flavin oxidoreductase COG:C, COG:COG1902, RefSeq:WP_011274597.1, SO:0001217, UniParc:UPI000054B6A3, UniRef:UniRef100_A0A7Z1SBW0, UniRef:UniRef50_P0DN73, UniRef:UniRef90_A0A380FWU3 contig_1 cds 254299 255264 + GCA012955505_00311 bioB biotin synthase BioB COG:COG0502, COG:H, EC:2.8.1.6, GO:0004076, GO:0005506, GO:0009102, GO:0051536, GO:0051537, GO:0051539, GO:1904047, KEGG:K01012, RefSeq:WP_011274598.1, SO:0001217, UniParc:UPI000054B6A4, UniRef:UniRef100_Q4L9U7, UniRef:UniRef50_Q81MB3, UniRef:UniRef90_Q4L9U7 contig_1 cds 255750 255893 - GCA012955505_00312 hypothetical protein SO:0001217, UniRef:UniRef50_A0A6B1RMS0 contig_1 cds 256082 257500 - GCA012955505_00313 citT Anion permease COG:COG0471, COG:G, RefSeq:WP_011274601.1, SO:0001217, UniParc:UPI000054B6A7, UniRef:UniRef100_A0A640N0P2, UniRef:UniRef50_Q7WS08, UniRef:UniRef90_A0A5B2Z4D9 contig_1 cds 257692 258891 + GCA012955505_00314 DUF819 domain-containing protein COG:COG5505, COG:S, RefSeq:WP_011274602.1, SO:0001217, UniParc:UPI000054B6A8, UniRef:UniRef100_A0A2A1KEU6, UniRef:UniRef50_O31634, UniRef:UniRef90_A0A2A1KEU6 contig_1 cds 258958 259743 - GCA012955505_00315 ycsI putative hydro-lyase COG:COG4336, COG:E, EC:4.2.1.-, GO:0003824, GO:0016829, KEGG:K22210, RefSeq:WP_011274603.1, SO:0001217, UniParc:UPI000054B6A9, UniRef:UniRef100_Q4L9U2, UniRef:UniRef50_P42966, UniRef:UniRef90_Q4L9U2 contig_1 cds 260018 261361 - GCA012955505_00316 betT BCCT family transporter COG:COG1292, COG:M, RefSeq:WP_368873870.1, SO:0001217, UniParc:UPI0034D687FD, UniRef:UniRef100_A0A640N1I8, UniRef:UniRef50_A0A376BML4, UniRef:UniRef90_A0A2K0AY43 contig_1 cds 261747 262154 + GCA012955505_00317 hypothetical protein PFAM:PF22643.2 contig_1 cds 262171 262401 + GCA012955505_00318 hypothetical protein contig_1 cds 262373 262627 + GCA012955505_00319 hypothetical protein PFAM:PF01979.26 contig_1 cds 262757 263005 + GCA012955505_00320 DUF3923 domain-containing protein RefSeq:WP_011274606.1, SO:0001217, UniParc:UPI000054B6AC, UniRef:UniRef100_A0A640N2U9, UniRef:UniRef50_A0A2K4DUK4, UniRef:UniRef90_A0A2K0AY73 contig_1 cds 263074 263445 - GCA012955505_00321 Glucosamine-6-phosphate deaminase SO:0001217, UniRef:UniRef50_A0A2X2M7N1 contig_1 cds 263517 264233 - GCA012955505_00322 hypothetical protein PFAM:PF04131.20 contig_1 cds 264321 265010 - GCA012955505_00323 ROK family protein SO:0001217, UniRef:UniRef50_UPI0030CB69CE contig_1 cds 265251 266132 + GCA012955505_00324 nanA N-acetylneuraminate lyase COG:COG0329, COG:EM, EC:4.1.3.3, GO:0005829, GO:0005975, GO:0008747, GO:0019262, RefSeq:WP_011274611.1, SO:0001217, UniParc:UPI000054B6B1, UniRef:UniRef100_Q4L9T4, UniRef:UniRef50_Q2G160, UniRef:UniRef90_Q4L9T4 contig_1 cds 266184 267716 + GCA012955505_00325 putP Na+/proline symporter COG:COG0591, COG:E, RefSeq:WP_011274612.1, SO:0001217, UniParc:UPI000054B6B2, UniRef:UniRef100_A0A640N0T8, UniRef:UniRef50_Q2G161, UniRef:UniRef90_A0A2K0AY89 contig_1 cds 267821 268639 + GCA012955505_00326 ydiL CPBP family intramembrane metalloprotease COG:COG1266, COG:O, RefSeq:WP_011274613.1, SO:0001217, UniParc:UPI000054B6B3, UniRef:UniRef100_A0A640N152, UniRef:UniRef50_A0A853V0S2, UniRef:UniRef90_A0A5B2Z3L2 contig_1 cds 268906 269127 + GCA012955505_00327 NDxxF motif lipoprotein RefSeq:WP_240555971.1, SO:0001217, UniParc:UPI000A518DFF, UniRef:UniRef100_A0A640N2X6, UniRef:UniRef50_A0A640N2X6, UniRef:UniRef90_A0A640N2X6 contig_1 cds 269258 270142 - GCA012955505_00328 ydiL CPBP family intramembrane metalloprotease COG:COG1266, COG:O, SO:0001217, UniRef:UniRef50_A0A533ITZ5, UniRef:UniRef90_A0A5B2Z036 contig_1 cds 270232 270582 + GCA012955505_00329 ydiL CPBP family intramembrane metalloprotease SdpA COG:COG1266, COG:O, RefSeq:WP_240557672.1, SO:0001217, UniParc:UPI001F0B181B, UniRef:UniRef100_UPI0008269F29, UniRef:UniRef50_A0A640N0R9, UniRef:UniRef90_A0A640N0R9 contig_1 cds 270601 270894 + GCA012955505_00330 CPBP family intramembrane glutamic endopeptidase RefSeq:WP_240557673.1, SO:0001217, UniParc:UPI001F0A9AB4, UniRef:UniRef100_UPI001F0A9AB4, UniRef:UniRef50_UPI001F0A9AB4, UniRef:UniRef90_UPI001F0A9AB4 contig_1 cds 270967 271599 - GCA012955505_00331 dppF Peptide ABC transporter ATP-binding protein COG:COG1124, COG:EP, RefSeq:WP_011274617.1, SO:0001217, UniParc:UPI000054B6B7, UniRef:UniRef100_A0A640N0V2, UniRef:UniRef50_A0A380FXX1, UniRef:UniRef90_A0A640N0V2 contig_1 cds 271586 272359 - GCA012955505_00332 dppD ABC transporter ATP-binding protein COG:COG0444, COG:EP, RefSeq:WP_011274618.1, SO:0001217, UniParc:UPI000054B6B8, UniRef:UniRef100_A0A640N170, UniRef:UniRef50_A0A380FXR3, UniRef:UniRef90_A0A5B2Z572 contig_1 cds 272326 273012 - GCA012955505_00333 dppC ABC transmembrane type-1 domain-containing protein COG:COG1173, COG:EP, SO:0001217, UniRef:UniRef50_A0A853V2J3, UniRef:UniRef90_A0A640N2Z8 contig_1 cds 273083 274042 - GCA012955505_00334 dppB ABC transporter permease COG:COG0601, COG:EP, RefSeq:WP_037570518.1, SO:0001217, UniParc:UPI0004A968A5, UniRef:UniRef100_A0A7Z1N8I5, UniRef:UniRef50_A0A380FVK1, UniRef:UniRef90_A0A7Z1N8I5 contig_1 cds 274035 275285 - GCA012955505_00335 ABC transporter substrate-binding protein SO:0001217, UniRef:UniRef50_UPI0034D678C6, UniRef:UniRef90_UPI0034D678C6 contig_1 cds 275461 275769 - GCA012955505_00336 pcp (pseudo) pyroglutamyl-peptidase I COG:COG2039, COG:O, EC:3.4.19.3, GO:0005829, GO:0006508, GO:0008234, GO:0016920, KEGG:K01304, SO:0001217, UniRef:UniRef50_P65679, UniRef:UniRef90_Q4L9S3 contig_1 cds 275712 275990 - GCA012955505_00337 hypothetical protein PFAM:PF01470.22 contig_1 cds 276015 276941 - GCA012955505_00338 Permease COG:COG3817, COG:S, RefSeq:WP_136719976.1, SO:0001217, UniParc:UPI0010AD46C2, UniRef:UniRef100_UPI0010AD46C2, UniRef:UniRef50_W1Q699, UniRef:UniRef90_A0A1J3ZT88 contig_1 cds 276934 277638 - GCA012955505_00339 Permease COG:COG3819, COG:S, RefSeq:WP_011274624.1, SO:0001217, UniParc:UPI000054B6BE, UniRef:UniRef100_A0A640N318, UniRef:UniRef50_I7KKP6, UniRef:UniRef90_A0A1J3ZUM6 contig_1 cds 277920 279296 + GCA012955505_00340 norB Quinolone resistance protein NorB KEGG:K08170, RefSeq:WP_136719975.1, SO:0001217, UniParc:UPI0010AB4FB4, UniRef:UniRef100_UPI0010AB4FB4, UniRef:UniRef50_A0A115E5S9, UniRef:UniRef90_A0A2A1KB13 contig_1 cds 279348 280322 - GCA012955505_00341 yxeI Choloylglycine hydrolase/NAAA C-terminal domain-containing protein COG:COG3049, COG:MR, RefSeq:WP_033079786.1, SO:0001217, UniParc:UPI0004A9A1FE, UniRef:UniRef100_A0A7Z1N8C4, UniRef:UniRef50_Q2G198, UniRef:UniRef90_Q4L9R9 contig_1 cds 280431 281519 - GCA012955505_00342 MFS transporter SO:0001217, UniRef:UniRef50_A0A640N329, UniRef:UniRef90_A0A640N329 contig_1 cds 281630 282592 - GCA012955505_00343 trhO rhodanese-related sulfurtransferase COG:COG1054, COG:J, EC:1.14.-.-, GO:0006400, GO:0016705, KEGG:K07146, RefSeq:WP_011274628.1, SO:0001217, UniParc:UPI000054B6C2, UniRef:UniRef100_Q4L9R7, UniRef:UniRef50_Q2NIJ6, UniRef:UniRef90_Q4L9R7 contig_1 cds 282830 283351 + GCA012955505_00344 drp35 (pseudo) Lactonase drp35 COG:COG3386, COG:G, EC:3.1.1.-, GO:0005737, GO:0016787, GO:0046872, KEGG:K02352, SO:0001217, UniRef:UniRef50_Q9S0S3, UniRef:UniRef90_Q4L9R6 contig_1 cds 283354 283620 + GCA012955505_00345 hypothetical protein SO:0001217, UniRef:UniRef50_A0A7S9LGF7 contig_1 cds 283851 283976 + GCA012955505_00346 hypothetical protein contig_1 cds 283970 284347 + GCA012955505_00347 (pseudo) hypothetical protein PFAM:PF02878.22, SO:0001217, UniRef:UniRef50_UPI00069D739A, UniRef:UniRef90_UPI00069D739A contig_1 cds 284626 284961 + GCA012955505_00348 hypothetical protein PFAM:PF00408.26 contig_1 cds 285228 286367 + GCA012955505_00349 Polysaccharide deacetylase RefSeq:WP_011274631.1, SO:0001217, UniParc:UPI000054B6C5, UniRef:UniRef100_A0A640N0Y2, UniRef:UniRef50_Q2FUT5, UniRef:UniRef90_A0A7Z1SEM7 contig_1 cds 286491 287549 + GCA012955505_00350 pbp4 penicillin-binding protein PBP4 COG:COG1686, COG:M, SO:0001217, UniRef:UniRef50_A0A4V6KIS0, UniRef:UniRef90_A0A2K0AY83 contig_1 cds 287530 287676 + GCA012955505_00351 (pseudo) DUF1958 domain-containing protein SO:0001217, UniRef:UniRef50_UPI003204E74B, UniRef:UniRef90_UPI00069D81AD contig_1 cds 287763 288350 - GCA012955505_00352 acrR TetR/AcrR family transcriptional regulator COG:COG1309, COG:K, RefSeq:WP_011274633.1, SO:0001217, UniParc:UPI000054B6C7, UniRef:UniRef100_A0A640N2D9, UniRef:UniRef50_S2YBU9, UniRef:UniRef90_A0A2K0AY90 contig_1 cds 288547 290322 + GCA012955505_00353 oleate hydratase COG:COG4716, COG:S, EC:4.2.1.53, GO:0006631, GO:0050151, GO:0071949, KEGG:K10254, RefSeq:WP_136719984.1, SO:0001217, UniParc:UPI0010AB959A, UniRef:UniRef100_UPI0010AB959A, UniRef:UniRef50_B9E972, UniRef:UniRef90_A0A5B2Z271 contig_1 cds 290384 291889 - GCA012955505_00354 ATP-binding cassette domain-containing protein SO:0001217, UniRef:UniRef50_UPI0007D9A8F7 contig_1 cds 292281 293030 - GCA012955505_00355 nhoA Arylamine N-acetyltransferase COG:COG2162, COG:Q, SO:0001217, UniRef:UniRef50_Q2FUR8, UniRef:UniRef90_A0A7Z1N8C5 contig_1 cds 293132 293767 - GCA012955505_00356 ABC-2 transporter permease RefSeq:WP_016930604.1, SO:0001217, UniParc:UPI000308703F, UniRef:UniRef100_A0A2J8BDQ6, UniRef:UniRef50_A0A853UZL4, UniRef:UniRef90_A0A2J8BDQ6 contig_1 cds 293767 294195 - GCA012955505_00357 ABC transporter ATP-binding protein SO:0001217, UniRef:UniRef50_A0A380HCV9 contig_1 cds 294192 294788 - GCA012955505_00358 Membrane protein SO:0001217, UniRef:UniRef50_A0A853V0T2, UniRef:UniRef90_A0A640N137 contig_1 cds 294785 294988 - GCA012955505_00359 xRE Transcriptional regulator COG:COG1476, COG:K, RefSeq:WP_011274640.1, SO:0001217, UniParc:UPI000054B6CE, UniRef:UniRef100_A0A640N1S4, UniRef:UniRef50_Q2G1V7, UniRef:UniRef90_A0A4Z1BPR2 contig_1 cds 295133 295540 - GCA012955505_00360 iscR Rrf2 family transcriptional regulator COG:COG1959, COG:K, SO:0001217, UniRef:UniRef50_Q48660, UniRef:UniRef90_A0A7Z1N8D7 contig_1 cds 295547 296023 + GCA012955505_00361 DMT family transporter SO:0001217, UniRef:UniRef50_UPI00214DBF42 contig_1 cds 296854 297813 + GCA012955505_00362 araJ MFS transporter COG:COG2814, COG:G, SO:0001217, UniRef:UniRef50_A0A4U9TB81, UniRef:UniRef90_A0A2K0AYA4 contig_1 cds 297901 298440 - GCA012955505_00363 Type I secretion system protein SO:0001217, UniRef:UniRef50_A0A380FW87, UniRef:UniRef90_A0A2K0AY94 contig_1 cds 298514 298792 - GCA012955505_00364 5'-nucleotidase C-terminal domain-containing protein SO:0001217, UniRef:UniRef50_UPI0034D2D603 contig_1 cds 298908 299351 - GCA012955505_00365 hypothetical protein contig_1 cds 299311 300009 - GCA012955505_00366 metallophosphoesterase SO:0001217, UniRef:UniRef50_UPI000ACC5657 contig_1 cds 300188 300361 + GCA012955505_00367 hypothetical protein contig_1 cds 300408 300761 + GCA012955505_00368 ATP-binding cassette domain-containing protein SO:0001217, UniRef:UniRef50_UPI00103DBB20 contig_1 cds 300749 301138 + GCA012955505_00369 ATP-binding cassette domain-containing protein SO:0001217, UniRef:UniRef50_A0A4R5NDJ2, UniRef:UniRef90_UPI00103E8055 contig_1 cds 301140 301403 + GCA012955505_00370 hypothetical protein contig_1 cds 301499 301939 + GCA012955505_00371 ABC transmembrane type-1 domain-containing protein SO:0001217, UniRef:UniRef50_A0A1G3RQC1 contig_1 cds 301936 302763 + GCA012955505_00372 phnE phosphonate ABC transporter, permease protein PhnE COG:COG3639, COG:P, EC:7.3.2.2, GO:0005886, GO:0015416, GO:0015716, GO:0055052, KEGG:K02042, RefSeq:WP_016930613.1, SO:0001217, UniParc:UPI0002DD42FE, UniRef:UniRef100_A0A640N2J4, UniRef:UniRef50_A0A7Z1N8X5, UniRef:UniRef90_A0A7Z1N8X5 contig_1 cds 303098 303316 + GCA012955505_00373 hypothetical protein contig_1 cds 303518 303703 - GCA012955505_00374 hypothetical protein contig_1 cds 304335 304616 + GCA012955505_00375 rimI (pseudo) N-acetyltransferase COG:COG0456, COG:J, SO:0001217, UniRef:UniRef50_Q2FUV4, UniRef:UniRef90_A0A7Z1N8D6 contig_1 gap 305312 305321 . contig_1 cds 305339 305683 + GCA012955505_00376 gtfB (pseudo) accessory Sec system glycosylation chaperone GtfB GO:0031647, SO:0001217, UniRef:UniRef50_UPI001F5AF020, UniRef:UniRef90_UPI001F5AF020 contig_1 cds 305756 306337 + GCA012955505_00377 gtfB (pseudo) accessory Sec system glycosylation chaperone GtfB GO:0031647, SO:0001217, UniRef:UniRef50_UPI000A11741E, UniRef:UniRef90_UPI0020CC32C3 contig_1 cds 306288 306464 + GCA012955505_00378 (pseudo) hypothetical protein SO:0001217, UniRef:UniRef50_UPI001F0AA54C, UniRef:UniRef90_UPI001F0AA54C contig_1 cds 306881 307606 - GCA012955505_00379 HAMP domain-containing sensor histidine kinase SO:0001217, UniRef:UniRef50_UPI000AE32012, UniRef:UniRef90_UPI000AE32012 contig_1 cds 307674 308168 - GCA012955505_00380 response regulator transcription factor SO:0001217, UniRef:UniRef50_UPI000EBF698E contig_1 cds 308190 308381 - GCA012955505_00381 hypothetical protein RefSeq:WP_011274666.1, SO:0001217, UniParc:UPI000054B6E8, UniRef:UniRef100_A0A7Z1N367, UniRef:UniRef50_A0A2A1K8D1, UniRef:UniRef90_A0A2A1K8D1 contig_1 cds 308568 308681 + GCA012955505_00382 hypothetical protein contig_1 cds 308845 309066 + GCA012955505_00383 hypothetical protein contig_1 cds 309226 309531 + GCA012955505_00384 DUF4064 domain-containing protein SO:0001217, UniRef:UniRef50_A0A7Z1N385, UniRef:UniRef90_UPI0025A29848 contig_1 cds 309606 310082 + GCA012955505_00385 msrA peptide-methionine (S)-S-oxide reductase COG:COG0225, COG:O, EC:1.8.4.11, GO:0008113, RefSeq:WP_011274670.1, SO:0001217, UniParc:UPI000054B6EC, UniRef:UniRef100_A0A7Z1N268, UniRef:UniRef50_M7NDY9, UniRef:UniRef90_A0A7Z1N268 contig_1 cds 310219 311058 + GCA012955505_00386 SDR family oxidoreductase RefSeq:WP_016930618.1, SO:0001217, UniParc:UPI0002F4C41B, UniRef:UniRef100_UPI0034D3D7BF, UniRef:UniRef50_A0A0D0RS60, UniRef:UniRef90_A0A5B2YW74 contig_1 cds 310925 311413 - GCA012955505_00387 hypothetical protein contig_1 cds 311466 312488 - GCA012955505_00388 ssuD Luciferase-like domain-containing protein COG:COG2141, COG:HR, SO:0001217, UniRef:UniRef50_E6SIG5, UniRef:UniRef90_Q4L9L9 contig_1 cds 312660 313844 + GCA012955505_00389 araJ MFS transporter COG:COG2814, COG:G, SO:0001217, UniParc:UPI000054B6F0, UniRef:UniRef100_A0A2A1KBX1, UniRef:UniRef50_A0A853V6A1, UniRef:UniRef90_A0A2A1KBX1 contig_1 cds 313916 314074 + GCA012955505_00390 hypothetical protein SO:0001217, UniRef:UniRef50_Q5HRE5, UniRef:UniRef90_UPI0004A9A575 contig_1 cds 314115 314684 - GCA012955505_00391 acrR HTH tetR-type domain-containing protein COG:COG1309, COG:K, RefSeq:WP_002504079.1, SO:0001217, UniParc:UPI00026C003E, UniRef:UniRef100_A0A2D0UV53, UniRef:UniRef50_Q4L9L6, UniRef:UniRef90_Q4L9L6 contig_1 cds 314985 315929 - GCA012955505_00392 proX ABC transporter, substrate-binding protein, putative COG:COG2113, COG:E, RefSeq:WP_011274677.1, SO:0001217, UniParc:UPI000054B6F3, UniRef:UniRef100_A0A2A1K9W9, UniRef:UniRef50_A0A1E9A6E3, UniRef:UniRef90_Q5HRE7 contig_1 cds 315953 316246 - GCA012955505_00393 hypothetical protein contig_1 cds 316243 316506 - GCA012955505_00394 hypothetical protein contig_1 cds 316481 316669 - GCA012955505_00395 hypothetical protein contig_1 cds 316620 317171 - GCA012955505_00396 Antibiotic transport-associated protein SO:0001217, UniRef:UniRef50_A0A380ENZ6 contig_1 cds 317221 318234 - GCA012955505_00397 MMPL family transporter SO:0001217, UniRef:UniRef50_UPI000BE0BC7A, UniRef:UniRef90_UPI000BE0BC7A contig_1 cds 318879 319253 - GCA012955505_00398 lysR (pseudo) HTH lysR-type domain-containing protein COG:COG0583, COG:K, SO:0001217, UniRef:UniRef50_Q4L9L2, UniRef:UniRef90_Q4L9L2 contig_1 cds 319313 319696 - GCA012955505_00399 lysR (pseudo) HTH lysR-type domain-containing protein COG:COG0583, COG:K, SO:0001217, UniRef:UniRef50_Q4L9L2, UniRef:UniRef90_Q4L9L2 contig_1 cds 319848 320315 + GCA012955505_00400 Putative metallophosphoesterase SO:0001217, UniRef:UniRef50_A0A380FVF7 contig_1 cds 320306 321076 + GCA012955505_00401 hypothetical protein contig_1 cds 321153 321581 + GCA012955505_00402 hypothetical protein contig_1 cds 322029 323603 + GCA012955505_00403 yfcC YfcC family protein COG:COG1288, COG:R, RefSeq:WP_016930623.1, SO:0001217, UniParc:UPI0002DD2116, UniRef:UniRef100_A0A2A1KBV5, UniRef:UniRef50_P44023, UniRef:UniRef90_Q4L9K9 contig_1 cds 323829 325367 + GCA012955505_00404 ptsG2 PTS glucose transporter subunit IIB COG:COG1264, COG:G, RefSeq:WP_011274684.1, SO:0001217, UniParc:UPI000054B6FA, UniRef:UniRef100_A0A2A1K6W3, UniRef:UniRef50_A0A0G9G6Y5, UniRef:UniRef90_A0A2A1K6W3 contig_1 cds 325488 326693 - GCA012955505_00405 amidase domain-containing protein SO:0001217, UniRef:UniRef50_UPI000A4D6E57 contig_1 cds 326986 327633 - GCA012955505_00406 hypothetical protein contig_1 cds 327827 330643 + GCA012955505_00407 yhgE Phage infection protein COG:COG1511, COG:S, KEGG:K01421, RefSeq:WP_011274686.1, SO:0001217, UniParc:UPI000054B6FC, UniRef:UniRef100_A0A7Z1N375, UniRef:UniRef50_Q49UI0, UniRef:UniRef90_A0A2A1KBY1 contig_1 cds 330737 331258 - GCA012955505_00408 DUF4887 domain-containing protein RefSeq:WP_016930625.1, SO:0001217, UniParc:UPI0002F3B717, UniRef:UniRef100_A0A2A1KAK9, UniRef:UniRef50_Q4L9K5, UniRef:UniRef90_Q4L9K5 contig_1 cds 331460 331990 + GCA012955505_00409 isaB immunodominant staphylococcal antigen IsaB family protein RefSeq:WP_011274688.1, SO:0001217, UniParc:UPI000054B6FE, UniRef:UniRef100_A0A2A1K9Y0, UniRef:UniRef50_A0A1J3ZVL8, UniRef:UniRef90_A0A2A1K9Y0 contig_1 cds 332101 332514 - GCA012955505_00410 YolD-like family protein RefSeq:WP_011274690.1, SO:0001217, UniParc:UPI000054B700, UniRef:UniRef100_A0A7Z1N1E4, UniRef:UniRef50_A0A2A1K6Y8, UniRef:UniRef90_A0A2A1K6Y8 contig_1 cds 332900 333475 + GCA012955505_00411 isaB immunodominant staphylococcal antigen IsaB family protein RefSeq:WP_016930626.1, SO:0001217, UniParc:UPI00031CE5B5, UniRef:UniRef100_A0A2A1K4P0, UniRef:UniRef50_A0A2A1K4P0, UniRef:UniRef90_A0A2A1K4P0 contig_1 cds 333655 334122 + GCA012955505_00412 argR Arginine repressor COG:COG1438, COG:K, KEGG:K03402, SO:0001217, UniRef:UniRef50_A0A380FX48, UniRef:UniRef90_A0A2A1K6M8 contig_1 cds 334343 335578 + GCA012955505_00413 arcA arginine deiminase COG:COG2235, COG:E, EC:3.5.3.6, GO:0005737, GO:0016990, GO:0019546, GO:0019547, RefSeq:WP_011274693.1, SO:0001217, UniParc:UPI000054B703, UniRef:UniRef100_Q4L9J9, UniRef:UniRef50_O86131, UniRef:UniRef90_Q4L9J9 contig_1 cds 335747 337030 + GCA012955505_00414 Arginine-ornithine antiporter SO:0001217, UniRef:UniRef50_J9W5S1 contig_1 cds 337065 337748 + GCA012955505_00415 arcR HTH-type transcriptional regulator ArcR COG:COG0664, COG:T, GO:0003677, GO:0003700, GO:0005829, GO:0030552, KEGG:K21828, SO:0001217, UniRef:UniRef50_Q2FUY1, UniRef:UniRef90_Q4L9J7 contig_1 cds 337943 338704 + GCA012955505_00416 frmB Tributyrin esterase COG:COG0627, COG:V, RefSeq:WP_037571041.1, SO:0001217, UniParc:UPI0004A929EA, UniRef:UniRef100_UPI0004A929EA, UniRef:UniRef50_Q2FUY3, UniRef:UniRef90_Q4L9J6 contig_1 cds 338998 339993 + GCA012955505_00417 purR LacI family DNA-binding transcriptional regulator COG:COG1609, COG:K, RefSeq:WP_145463211.1, SO:0001217, UniParc:UPI0011A060AE, UniRef:UniRef100_UPI0011A060AE, UniRef:UniRef50_R2SUP4, UniRef:UniRef90_Q4L9J5 contig_1 cds 340154 341002 + GCA012955505_00418 gloB Metallo-beta-lactamase domain-containing protein COG:COG0491, COG:R, EC:3.1.1.81, KEGG:K13075, SO:0001217, UniRef:UniRef50_A0A0E3WHU0, UniRef:UniRef90_Q4L9J4 contig_1 cds 341027 341230 + GCA012955505_00419 (pseudo) alcohol dehydrogenase catalytic domain-containing protein SO:0001217, UniRef:UniRef50_A0A536YJB6, UniRef:UniRef90_UPI00065BA07B contig_1 cds 341274 341567 + GCA012955505_00420 hypothetical protein PFAM:PF08240.17 contig_1 cds 341567 342139 + GCA012955505_00421 Alcohol dehydrogenase-like C-terminal domain-containing protein SO:0001217, UniRef:UniRef50_A0A5J4JLQ4 contig_1 cds 342227 342451 - GCA012955505_00422 hypothetical protein SO:0001217, UniRef:UniRef50_UPI001F547BC1 contig_1 cds 342475 342750 + GCA012955505_00423 hypothetical protein PFAM:PF09587.15 contig_1 cds 342752 343285 + GCA012955505_00424 capA (pseudo) Capsule synthesis protein CapA domain-containing protein COG:COG2843, COG:M, SO:0001217, UniRef:UniRef50_Q4L9J1, UniRef:UniRef90_Q4L9J1 contig_1 cds 343448 343834 - GCA012955505_00425 (pseudo) thiamine pyrophosphate-dependent enzyme SO:0001217, UniRef:UniRef50_A0A1V0UYZ1, UniRef:UniRef90_UPI0018798EC3 contig_1 cds 343965 344204 - GCA012955505_00426 hypothetical protein PFAM:PF00205.28 contig_1 cds 344405 344842 - GCA012955505_00427 Pyruvate decarboxylase Alpha-keto-acid decarboxylase SO:0001217, UniRef:UniRef50_A0A7G2IIH3 contig_1 cds 344991 345440 + GCA012955505_00428 marR HTH marR-type domain-containing protein COG:COG1846, COG:K, RefSeq:WP_037551495.1, SO:0001217, UniParc:UPI000448B64F, UniRef:UniRef100_A0A2K0AYG3, UniRef:UniRef50_Q2FUY4, UniRef:UniRef90_Q4L9I9 contig_1 cds 345373 345621 - GCA012955505_00429 hypothetical protein contig_1 cds 345630 345968 - GCA012955505_00430 (pseudo) FMN dependent NADH:quinone oxidoreductase EC:1.7.1.17, KEGG:K01118, SO:0001217, UniRef:UniRef50_O32224, UniRef:UniRef90_A0A2A1K6N9 contig_1 cds 346124 346225 + GCA012955505_00431 SE2200 family small protein RefSeq:WP_016930637.1, SO:0001217, UniParc:UPI0003682F63, UniRef:UniRef100_A0A2A1KA46, UniRef:UniRef50_Q4L9H9, UniRef:UniRef90_A0A2A1KA46 contig_1 gap 346649 346658 . contig_1 cds 347064 347159 + GCA012955505_00432 hypothetical protein contig_1 cds 347149 347826 + GCA012955505_00433 cps2a LytR family transcriptional regulator COG:COG1316, COG:M, EC:2.7.8.-, KEGG:K01005, RefSeq:WP_053032545.1, SO:0001217, UniParc:UPI00069EBDB0, UniRef:UniRef100_UPI0015D6DD78, UniRef:UniRef50_A0A380FX16, UniRef:UniRef90_A0A7Z1N3U0 contig_1 cds 347916 349391 - GCA012955505_00434 phoA Alkaline phosphatase III COG:COG1785, COG:PR, RefSeq:WP_145463203.1, SO:0001217, UniParc:UPI0011A5E366, UniRef:UniRef100_UPI0011A5E366, UniRef:UniRef50_A0A0U1MVV2, UniRef:UniRef90_Q4L9G5 contig_1 ncRNA 348484 348587 + GCA012955505_00435 sau-13 Staphylococcus sRNA sau-13 RFAM:RF02385, SO:0000655 contig_1 ncRNA-region 349616 349717 + SAM riboswitch aptamer (S box leader) RFAM:RF00162, SO:0000140 contig_1 cds 349790 349960 + GCA012955505_00436 hypothetical protein RefSeq:WP_011274728.1, SO:0001217, UniParc:UPI000054B726, UniRef:UniRef100_Q4L9G4, UniRef:UniRef50_Q4L9G4, UniRef:UniRef90_Q4L9G4 contig_1 cds 350146 350310 + GCA012955505_00437 hypothetical protein RefSeq:WP_016930641.1, SO:0001217, UniParc:UPI000306AA24, UniRef:UniRef100_UPI000306AA24, UniRef:UniRef50_A0A8X8GXE5, UniRef:UniRef90_Q4L9G3 contig_1 cds 350340 351008 + GCA012955505_00438 ompR DNA-binding response regulator COG:COG0745, COG:TK, RefSeq:WP_016930642.1, SO:0001217, UniParc:UPI0002F0FDD2, UniRef:UniRef100_A0A2A1KBL8, UniRef:UniRef50_A0A0M6WUX4, UniRef:UniRef90_A0A7Z1N4V3 contig_1 cds 351011 351670 + GCA012955505_00439 baeS (pseudo) histidine kinase COG:COG0642, COG:T, SO:0001217, UniRef:UniRef50_A0A389PV50, UniRef:UniRef90_A0A2K0AYE7 contig_1 cds 352022 352645 + GCA012955505_00440 ABC transporter domain-containing protein SO:0001217, UniRef:UniRef50_R2SUY0 contig_1 cds 352587 352739 + GCA012955505_00441 bceA (pseudo) Bacitracin export ATP-binding protein BceA SO:0001217, UniRef:UniRef50_A0A428GXG3, UniRef:UniRef90_UPI0002D370DF contig_1 cds 353394 353651 + GCA012955505_00442 hypothetical protein contig_1 cds 353657 354148 + GCA012955505_00443 (pseudo) FtsX-like permease family protein SO:0001217, UniRef:UniRef50_UPI0021B0C60C, UniRef:UniRef90_UPI0021B0C60C contig_1 cds 354274 354546 + GCA012955505_00444 (pseudo) FtsX-like permease family protein SO:0001217, UniRef:UniRef50_A0A7Z7YSQ9, UniRef:UniRef90_UPI00295E689C contig_1 cds 354666 355856 + GCA012955505_00445 DUF4064 domain-containing protein RefSeq:WP_016930646.1, SO:0001217, UniParc:UPI00031BEE1B, UniRef:UniRef100_A0A2A1KD34, UniRef:UniRef50_Q4L9F8, UniRef:UniRef90_Q4L9F8 contig_1 ncRNA-region 356212 356313 - TPP riboswitch aptamer (THI element) RFAM:RF00059, SO:0000035 contig_1 cds 356549 357745 + GCA012955505_00446 5,10-methylene-tetrahydrofolate dehydrogenase RefSeq:WP_033079698.1, SO:0001217, UniParc:UPI00044F4421, UniRef:UniRef100_A0A2A1KEM5, UniRef:UniRef50_A0A0H2VJR3, UniRef:UniRef90_Q4L9F7 contig_1 cds 357742 358860 + GCA012955505_00447 5,10-methylene-tetrahydrofolate dehydrogenase RefSeq:WP_037570972.1, SO:0001217, UniParc:UPI0004A92088, UniRef:UniRef100_UPI0034D46106, UniRef:UniRef50_Q4A065, UniRef:UniRef90_Q4L9F6 contig_1 cds 359053 359850 + GCA012955505_00448 Zinc ribbon domain-containing protein RefSeq:WP_037558328.1, SO:0001217, UniParc:UPI000448A42E, UniRef:UniRef100_UPI000448A42E, UniRef:UniRef50_A0A2A1K9E4, UniRef:UniRef90_A0A2A1K9E4 contig_1 cds 360047 360778 + GCA012955505_00449 cysH phosphoadenylyl-sulfate reductase COG:COG0175, COG:EH, EC:1.8.4.10, EC:1.8.4.8, GO:0003824, GO:0004604, GO:0005737, GO:0019344, GO:0019379, GO:0043866, GO:0051539, GO:0070814, KEGG:K00390, RefSeq:WP_011274739.1, SO:0001217, UniParc:UPI000054B731, UniRef:UniRef100_Q4L9F3, UniRef:UniRef50_P94498, UniRef:UniRef90_Q4L9F3 contig_1 cds 360957 362825 + GCA012955505_00450 cysJ assimilatory sulfite reductase (NADPH) flavoprotein subunit COG:COG0369, COG:FP, EC:1.8.1.2, GO:0004783, GO:0006790, GO:0009337, GO:0010181, GO:0019344, GO:0050660, RefSeq:WP_037570970.1, SO:0001217, UniParc:UPI0004A9AF5C, UniRef:UniRef100_UPI0004A9AF5C, UniRef:UniRef50_A0A654C556, UniRef:UniRef90_A0A380FVL9 contig_1 cds 362844 364565 + GCA012955505_00451 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit COG:COG0155, COG:P, EC:1.8.1.2, GO:0000103, GO:0004783, GO:0008652, GO:0009337, GO:0019344, GO:0020037, GO:0046872, GO:0050311, GO:0050661, GO:0051539, GO:0070814, RefSeq:WP_046464688.1, SO:0001217, UniParc:UPI000623FEDB, UniRef:UniRef100_UPI000623FEDB, UniRef:UniRef50_C0Z9X2, UniRef:UniRef90_Q4L9F1 contig_1 cds 364602 365366 + GCA012955505_00452 cysG uroporphyrinogen-III C-methyltransferase COG:COG0007, COG:H, RefSeq:WP_016930653.1, SO:0001217, UniParc:UPI0003031E2D, UniRef:UniRef100_A0A2A1KAV7, UniRef:UniRef50_P29928, UniRef:UniRef90_A0A2A1KAV7 contig_1 cds 365410 366021 + GCA012955505_00453 cysG2 NAD(P)-binding protein COG:COG1648, COG:H, RefSeq:WP_037570966.1, SO:0001217, UniParc:UPI0004A985CF, UniRef:UniRef100_UPI0004A985CF, UniRef:UniRef50_A0A380FX36, UniRef:UniRef90_Q4L9E9 contig_1 cds 366042 366911 + GCA012955505_00454 tauE putative membrane transporter protein COG:COG0730, COG:P, RefSeq:WP_011274744.1, SO:0001217, UniParc:UPI000054B736, UniRef:UniRef100_A0A2A1KCJ9, UniRef:UniRef50_B9DLM6, UniRef:UniRef90_A0A2A1KCJ9 contig_1 cds 366963 368141 + GCA012955505_00455 sat Sulfate adenylyltransferase COG:COG2046, COG:P, EC:2.7.7.4, GO:0000103, GO:0004781, GO:0005524, GO:0070814, RefSeq:WP_016930654.1, SO:0001217, UniParc:UPI00031E6D65, UniRef:UniRef100_UPI00031E6D65, UniRef:UniRef50_O34764, UniRef:UniRef90_Q4L9E7 contig_1 cds 368158 368757 + GCA012955505_00456 cysC Adenylyl-sulfate kinase COG:COG0529, COG:P, EC:2.7.1.25, GO:0000103, GO:0004020, GO:0005524, GO:0070814, RefSeq:WP_016930655.1, SO:0001217, UniParc:UPI00031932DD, UniRef:UniRef100_UPI00031932DD, UniRef:UniRef50_P0A6J1, UniRef:UniRef90_Q4L9E6 contig_1 cds 368896 370266 + GCA012955505_00457 citM Citrate transporter COG:C, COG:COG2851, RefSeq:WP_011274747.1, SO:0001217, UniParc:UPI000054B739, UniRef:UniRef100_A0A7Z1SEG7, UniRef:UniRef50_U7MQB7, UniRef:UniRef90_A0A2A1KB51 contig_1 cds 370786 371577 + GCA012955505_00458 CHAP domain-containing protein COG:COG3942, COG:M, RefSeq:WP_049394587.1, SO:0001217, UniParc:UPI00066AD2A4, UniRef:UniRef100_A0A2A1K9D5, UniRef:UniRef50_Q2G2J2, UniRef:UniRef90_A0A7Z1SCW9 contig_1 cds 371758 372024 + GCA012955505_00459 hypothetical protein RefSeq:WP_011274750.1, SO:0001217, UniParc:UPI000054B73C, UniRef:UniRef100_A0A2A1KEJ6, UniRef:UniRef50_A0A4Z1B2H1, UniRef:UniRef90_A0A2A1KEJ6 contig_1 cds 372248 373540 + GCA012955505_00460 dcuA C4-dicarboxylate ABC transporter COG:COG2704, COG:G, RefSeq:WP_016930657.1, SO:0001217, UniParc:UPI0002FA6A9D, UniRef:UniRef100_A0A2A1KBT8, UniRef:UniRef50_B9DJR0, UniRef:UniRef90_Q4L9E1 contig_1 cds 373852 375477 + GCA012955505_00461 betT Choline-glycine betaine transporter COG:COG1292, COG:M, RefSeq:WP_029376614.1, SO:0001217, UniParc:UPI0002DCCAA1, UniRef:UniRef100_A0A2A1KBJ7, UniRef:UniRef50_B9DJU7, UniRef:UniRef90_A0A380FVY8 contig_1 cds 375537 376091 - GCA012955505_00462 cudC choline uptake/conversion transcriptional regulator CudC COG:COG1510, COG:K, RefSeq:WP_011274753.1, SO:0001217, UniParc:UPI000054B73F, UniRef:UniRef100_A0A2A1KAU7, UniRef:UniRef50_P71015, UniRef:UniRef90_A0A2A1KAU7 contig_1 cds 376354 377844 + GCA012955505_00463 betB betaine-aldehyde dehydrogenase COG:COG1012, COG:I, EC:1.2.1.8, GO:0008802, GO:0019285, GO:0046872, RefSeq:WP_016930658.1, SO:0001217, UniParc:UPI0002FC0097, UniRef:UniRef100_A0A2K3VCT5, UniRef:UniRef50_P71016, UniRef:UniRef90_Q4L9D8 contig_1 cds 377986 379692 + GCA012955505_00464 betA choline dehydrogenase COG:COG2303, COG:IR, EC:1.1.99.1, GO:0008802, GO:0008812, GO:0016020, GO:0019285, GO:0050660, KEGG:K00108, RefSeq:WP_053016335.1, SO:0001217, UniParc:UPI00069FCC6F, UniRef:UniRef100_A0AB38PE59, UniRef:UniRef50_Q9X2M2, UniRef:UniRef90_Q4L9D7 contig_1 cds 380312 382201 + GCA012955505_00465 aryK transcriptional regulator AryK COG:COG3664, COG:G, SO:0001217, UniRef:UniRef50_Q4L9D6, UniRef:UniRef90_Q4L9D6 contig_1 cds 382328 383503 + GCA012955505_00466 abgB Amidohydrolase COG:COG1473, COG:R, RefSeq:WP_037538344.1, SO:0001217, UniParc:UPI00051D2D09, UniRef:UniRef100_UPI00051D2D09, UniRef:UniRef50_A0A380FVH8, UniRef:UniRef90_A0A7Z1N4M2 contig_1 cds 383516 384898 + GCA012955505_00467 proP Quinolone resistance protein NorB COG:COG0477, COG:GEPR, KEGG:K08170, RefSeq:WP_037538345.1, SO:0001217, UniParc:UPI00051DAB81, UniRef:UniRef100_UPI00051DAB81, UniRef:UniRef50_Q2FYJ5, UniRef:UniRef90_A0A7Z1N4U3 contig_1 cds 385084 386262 + GCA012955505_00468 Amidohydrolase RefSeq:WP_272900440.1, SO:0001217, UniParc:UPI000A9875FF, UniRef:UniRef100_UPI00187ACE97, UniRef:UniRef50_A0A380FVH8, UniRef:UniRef90_A0A2A1K9C6 contig_1 cds 386379 386591 + GCA012955505_00469 yozE YozE SAM-like domain-containing protein RefSeq:WP_037538349.1, SO:0001217, UniParc:UPI00051D6DBE, UniRef:UniRef100_A0A2A1KEI7, UniRef:UniRef50_A0A7Z1N3R8, UniRef:UniRef90_A0A7Z1N3R8 contig_1 cds 386691 387122 + GCA012955505_00470 hmoA Signal transduction protein TRAP COG:COG2329, COG:H, SO:0001217, UniRef:UniRef50_A0A2T4SS92, UniRef:UniRef90_A0A2T4SS92 contig_1 cds 387289 388884 + GCA012955505_00471 mbcS acyl-CoA synthetase MbcS COG:COG0365, COG:I, RefSeq:WP_049426435.1, SO:0001217, UniParc:UPI00066EC3D1, UniRef:UniRef100_UPI00066EC3D1, UniRef:UniRef50_C0SPB0, UniRef:UniRef90_A0A2T4L3B0 contig_1 cds 388990 389133 - GCA012955505_00472 hypothetical protein PFAM:PF13561.12 contig_1 cds 389194 389466 + GCA012955505_00473 lysR (pseudo) LysR substrate-binding domain-containing protein SO:0001217, UniRef:UniRef50_UPI00290394C2, UniRef:UniRef90_UPI00290394C2 contig_1 cds 390134 390883 + GCA012955505_00474 Pyruvate phosphate dikinase SO:0001217, UniRef:UniRef50_A0A380FM77 contig_1 cds 391106 391351 + GCA012955505_00475 (pseudo) PEP-utilizing enzyme SO:0001217, UniRef:UniRef50_UPI0030C20B63, UniRef:UniRef90_UPI0030C20B63 contig_1 cds 391402 392457 + GCA012955505_00476 Pyruvate, phosphate dikinase SO:0001217, UniRef:UniRef50_A0A139NXR1 contig_1 cds 392459 392938 + GCA012955505_00477 ppsR (pseudo) Putative pyruvate, phosphate dikinase regulatory protein 1 COG:COG1806, COG:T, EC:2.7.11.32, EC:2.7.4.27, GO:0004674, GO:0005524, GO:0016776, GO:0043531, SO:0001217, UniRef:UniRef50_Q4A0R6, UniRef:UniRef90_Q4L9C4 contig_1 cds 392877 393281 + GCA012955505_00478 kinase/pyrophosphorylase SO:0001217, UniRef:UniRef50_UPI0028A5912C contig_1 cds 393591 395084 + GCA012955505_00479 lqo L-lactate dehydrogenase (quinone) COG:COG0579, COG:G, EC:1.1.5.-, EC:1.1.5.4, KEGG:K00116, RefSeq:WP_048668172.1, SO:0001217, UniParc:UPI0006609CC6, UniRef:UniRef100_UPI0034D4E36B, UniRef:UniRef50_O69282, UniRef:UniRef90_Q4L9C3 contig_1 cds 395143 395847 - GCA012955505_00480 gntR GntR family transcriptional regulator KEGG:K03489, RefSeq:WP_048668171.1, SO:0001217, UniParc:UPI00065F7C17, UniRef:UniRef100_UPI00065F7C17, UniRef:UniRef50_Q2G1B1, UniRef:UniRef90_A0A2A1KB31 contig_1 cds 396067 396483 + GCA012955505_00481 6-phospho-beta-glucosidase SO:0001217, UniRef:UniRef50_H1B4K1 contig_1 cds 396574 396798 + GCA012955505_00482 yciI YciI family protein SO:0001217, UniRef:UniRef50_UPI000A9E21A7, UniRef:UniRef90_UPI000A9E21A7 contig_1 cds 396908 397240 + GCA012955505_00483 padR PadR family transcriptional regulator SO:0001217, UniRef:UniRef50_UPI0002D6AC68 contig_1 cds 397252 397440 + GCA012955505_00484 hypothetical protein SO:0001217, UniRef:UniRef50_Q4L9B7, UniRef:UniRef90_Q4L9B7 contig_1 cds 397642 398532 - GCA012955505_00485 fda fructose bisphosphate aldolase COG:COG3588, COG:G, EC:4.1.2.13, GO:0004332, GO:0006096, KEGG:K01623, RefSeq:WP_011274776.1, SO:0001217, UniParc:UPI000054B756, UniRef:UniRef100_Q4L9B6, UniRef:UniRef50_Q8CMY5, UniRef:UniRef90_Q8CMY5 contig_1 cds 398690 399106 + GCA012955505_00486 ATPase AAA-type core domain-containing protein SO:0001217, UniRef:UniRef50_Q4L9B5 contig_1 cds 399292 399498 + GCA012955505_00487 hypothetical protein contig_1 cds 399768 399965 + GCA012955505_00488 hypothetical protein contig_1 cds 400341 400562 + GCA012955505_00489 hypothetical protein contig_1 cds 400559 401308 + GCA012955505_00490 DUF4015 domain-containing protein SO:0001217, UniRef:UniRef50_A0A380GZK4 contig_1 cds 401200 401916 - GCA012955505_00491 Gram-positive cocci surface proteins LPxTG domain-containing protein SO:0001217, UniRef:UniRef50_Q4L9B0, UniRef:UniRef90_Q4L9B0 contig_1 ncRNA-region 402504 402610 + SAM riboswitch aptamer (S box leader) RFAM:RF00162, SO:0000140 contig_1 cds 402703 403392 + GCA012955505_00492 Lipoprotein KEGG:K02073, SO:0001217, UniRef:UniRef50_A0A380G8D6, UniRef:UniRef90_A0A2K0A5G0 contig_1 cds 403532 403990 + GCA012955505_00493 hypothetical protein PFAM:PF00202.27 contig_1 cds 403972 404865 + GCA012955505_00494 4-aminobutyrate aminotransferase SO:0001217, UniRef:UniRef50_A0A380DYT8 contig_1 cds 404919 406370 - GCA012955505_00495 potE Amino acid permease COG:COG0531, COG:E, RefSeq:WP_016930671.1, SO:0001217, UniParc:UPI0002F09CAC, UniRef:UniRef100_A0A2A1K9A9, UniRef:UniRef50_A2RHI9, UniRef:UniRef90_Q4L9A6 contig_1 cds 406984 408648 + GCA012955505_00496 alsS acetolactate synthase AlsS COG:COG0028, COG:EH, EC:2.2.1.6, GO:0000287, GO:0003984, GO:0030976, GO:0034077, RefSeq:WP_011274786.1, SO:0001217, UniParc:UPI000054B760, UniRef:UniRef100_A0A2A1KEG2, UniRef:UniRef50_A0A383RJ49, UniRef:UniRef90_A0A380FX72 contig_1 cds 408683 409387 + GCA012955505_00497 budA acetolactate decarboxylase COG:COG3527, COG:Q, EC:4.1.1.5, GO:0045151, GO:0047605, KEGG:K01575, RefSeq:WP_011274787.1, SO:0001217, UniParc:UPI000054B761, UniRef:UniRef100_Q4L9A4, UniRef:UniRef50_A0A641A785, UniRef:UniRef90_A0A380FY41 contig_1 cds 409659 410267 + GCA012955505_00498 zinc ribbon domain-containing protein SO:0001217, UniRef:UniRef50_UPI001F41367B, UniRef:UniRef90_UPI0027FEF7E7 contig_1 cds 410276 410524 + GCA012955505_00499 (pseudo) hypothetical protein SO:0001217, UniRef:UniRef50_UPI001F0AB24E, UniRef:UniRef90_UPI001F0AB24E contig_1 cds 410660 410881 - GCA012955505_00500 Xaa-Pro dipeptidyl-peptidase C-terminal domain-containing protein SO:0001217, UniRef:UniRef50_A0A2A1KAS0, UniRef:UniRef90_A0A2A1KAS0 contig_1 cds 411015 411608 + GCA012955505_00501 acrR HTH tetR-type domain-containing protein COG:COG1309, COG:K, RefSeq:WP_011274789.1, SO:0001217, UniParc:UPI000054B763, UniRef:UniRef100_Q4L9A2, UniRef:UniRef50_Q2FV26, UniRef:UniRef90_Q4L9A2 contig_1 cds 412159 412413 + GCA012955505_00502 DUF3278 domain-containing protein RefSeq:WP_011274791.1, SO:0001217, UniParc:UPI000054B765, UniRef:UniRef100_A0A7Z1N6W7, UniRef:UniRef50_A0A7Z1N6W7, UniRef:UniRef90_A0A7Z1N6W7 contig_1 cds 412373 412672 + GCA012955505_00503 hypothetical protein RefSeq:WP_123943405.1, SO:0001217, UniParc:UPI000A7C2A83, UniRef:UniRef100_UPI000A7C2A83, UniRef:UniRef50_UPI0011572B99, UniRef:UniRef90_UPI0011572B99 contig_1 cds 412676 413179 + GCA012955505_00504 DUF3278 domain-containing protein RefSeq:WP_011274793.1, SO:0001217, UniParc:UPI000054B767, UniRef:UniRef100_A0A2A1KCF5, UniRef:UniRef50_A0A2A1KCF5, UniRef:UniRef90_A0A2A1KCF5 contig_1 cds 413243 413959 + GCA012955505_00505 queH Epoxyqueuosine reductase QueH COG:COG1636, COG:J, EC:1.17.99.6, KEGG:K09765, RefSeq:WP_011274794.1, SO:0001217, UniParc:UPI000054B768, UniRef:UniRef100_A0A2A1KCY7, UniRef:UniRef50_Q9A1K3, UniRef:UniRef90_A0A380FW22 contig_1 cds 414012 414305 - GCA012955505_00506 hypothetical protein RefSeq:WP_011274795.1, SO:0001217, UniParc:UPI000054B769, UniRef:UniRef100_A0A2A1KEG8, UniRef:UniRef50_A0A2A1KEG8, UniRef:UniRef90_A0A2A1KEG8 contig_1 cds 414378 415445 - GCA012955505_00507 pyrD quinone-dependent dihydroorotate dehydrogenase COG:COG0167, COG:F, EC:1.3.5.2, RefSeq:WP_011274796.1, SO:0001217, UniParc:UPI000054B76A, UniRef:UniRef100_A0A2A1KB10, UniRef:UniRef50_Q2FV30, UniRef:UniRef90_A0A380FX84 contig_1 cds 415638 416492 + GCA012955505_00508 fN3K Fructosamine kinase COG:COG3001, COG:G, RefSeq:WP_011274797.1, SO:0001217, UniParc:UPI000054B76B, UniRef:UniRef100_A0A2A1K9A0, UniRef:UniRef50_Q2FV31, UniRef:UniRef90_A0A2A1K9A0 contig_1 cds 416545 417000 - GCA012955505_00509 (pseudo) 6-methylsalicylate decarboxylase EC:4.1.1.52, KEGG:K22213, SO:0001217, UniRef:UniRef50_S2XJB3, UniRef:UniRef90_A0A380FVK9 contig_1 cds 417148 417492 - GCA012955505_00510 hypothetical protein contig_1 cds 417496 418131 - GCA012955505_00511 Bile acid 7-alpha dehydratase RefSeq:WP_011274799.1, SO:0001217, UniParc:UPI000054B76D, UniRef:UniRef100_A0A2A1KBP5, UniRef:UniRef50_A0A380FXQ5, UniRef:UniRef90_A0A2A1KBP5 contig_1 cds 418152 418511 - GCA012955505_00512 Alpha/beta hydrolase SO:0001217, UniParc:UPI000054B76E, UniRef:UniRef100_Q4L991, UniRef:UniRef50_Q2FDS6, UniRef:UniRef90_A0A5B2YWD5 contig_1 cds 418697 419320 + GCA012955505_00513 NmrA-like domain-containing protein SO:0001217, UniParc:UPI000054B76F, UniRef:UniRef100_Q4L990, UniRef:UniRef50_A0A380FXE5, UniRef:UniRef90_Q4L990 contig_1 cds 419348 419725 + GCA012955505_00514 Glyoxalase COG:COG3607, COG:R, RefSeq:WP_011274802.1, SO:0001217, UniParc:UPI000054B770, UniRef:UniRef100_A0A2A1K9D7, UniRef:UniRef50_A0A654C7N0, UniRef:UniRef90_A0A2A1K9D7 contig_1 cds 419781 420017 - GCA012955505_00515 ynzC UPF0291 protein B8W97_03865 COG:COG4224, COG:S, RefSeq:WP_011274805.1, SO:0001217, UniParc:UPI000054B773, UniRef:UniRef100_A0A2A1KCE5, UniRef:UniRef50_A0A380DPS4, UniRef:UniRef90_A0A2A1KCE5 contig_1 cds 420030 420242 - GCA012955505_00516 hypothetical protein contig_1 cds 420239 420604 - GCA012955505_00517 LLM class flavin-dependent oxidoreductase SO:0001217, UniRef:UniRef50_UPI00197FD480, UniRef:UniRef90_UPI00197FD480 contig_1 cds 420812 421378 - GCA012955505_00518 acrR TetR family transcriptional regulator COG:COG1309, COG:K, RefSeq:WP_011274807.1, SO:0001217, UniParc:UPI000054B775, UniRef:UniRef100_A0A2A1KEF7, UniRef:UniRef50_Q2FV48, UniRef:UniRef90_A0A2A1KEF7 contig_1 cds 421685 422248 + GCA012955505_00519 spoIIQ2 lysostaphin COG:COG5821, COG:D, RefSeq:WP_053032886.1, SO:0001217, UniParc:UPI00069EC798, UniRef:UniRef100_UPI00069EC798, UniRef:UniRef50_A0A2A1KB00, UniRef:UniRef90_A0A2A1KB00 contig_1 cds 422516 422884 + GCA012955505_00520 Regulatory protein SO:0001217, UniRef:UniRef50_A0A380GXW2 contig_1 cds 422955 423530 + GCA012955505_00521 pfoR (pseudo) Phosphotransferase system EIIC domain-containing protein COG:COG3641, COG:T, KEGG:K07035, SO:0001217, UniRef:UniRef50_Q2FV51, UniRef:UniRef90_Q4L982 contig_1 cds 423686 423937 + GCA012955505_00522 hypothetical protein PFAM:PF03976.20, SO:0001217, UniRef:UniRef50_UPI000B2A568E contig_1 cds 424039 424998 + GCA012955505_00523 phosphate--AMP phosphotransferase SO:0001217, UniRef:UniRef50_UPI0034C69481 contig_1 cds 425229 425945 + GCA012955505_00524 isaA putative transglycosylase IsaA EC:3.2.-.-, GO:0005576, GO:0016798, RefSeq:WP_037536158.1, SO:0001217, UniParc:UPI00051DCEC1, UniRef:UniRef100_UPI00051DCEC1, UniRef:UniRef50_A7IY64, UniRef:UniRef90_Q4L980 contig_1 cds 426131 426628 + GCA012955505_00525 crtO Glycosyl-4,4'-diaponeurosporenoate acyltransferase EC:2.3.1.-, GO:0005886, GO:0016117, GO:0016746, SO:0001217, UniRef:UniRef50_Q4L979, UniRef:UniRef90_Q4L979 contig_1 cds 426601 428109 + GCA012955505_00526 crtP 4,4'-diaponeurosporene oxygenase COG:COG1233, COG:Q, EC:1.14.99.-, GO:0016117, GO:0016491, KEGG:K10210, RefSeq:WP_011274813.1, SO:0001217, UniParc:UPI000054B77B, UniRef:UniRef100_Q4L978, UniRef:UniRef50_Q4VKU9, UniRef:UniRef90_Q4L978 contig_1 cds 428123 429250 + GCA012955505_00527 crtQ 4,4'-diaponeurosporenoate glycosyltransferase COG:COG0463, COG:M, EC:2.4.1.-, GO:0005886, GO:0016117, GO:0016757, KEGG:K10211, RefSeq:WP_016931234.1, SO:0001217, UniParc:UPI00036DA7F6, UniRef:UniRef100_UPI00036DA7F6, UniRef:UniRef50_Q4L977, UniRef:UniRef90_Q4L977 contig_1 cds 429271 430128 + GCA012955505_00528 crtM 4,4'-diapophytoene synthase COG:COG1562, COG:I, EC:2.5.1.96, GO:0004311, GO:0016117, GO:0046872, GO:0051996, RefSeq:WP_011274815.1, SO:0001217, UniParc:UPI000054B77D, UniRef:UniRef100_Q4L976, UniRef:UniRef50_Q2FV59, UniRef:UniRef90_Q4L976 contig_1 cds 430253 431644 + GCA012955505_00529 crtN 4,4'-diapophytoene desaturase (4,4'-diaponeurosporene-forming) COG:COG1233, COG:Q, EC:1.3.8.-, GO:0016117, GO:0102223, SO:0001217, UniRef:UniRef50_Q2FV60, UniRef:UniRef90_Q4L975 contig_1 ncRNA-region 431724 431831 + SAM riboswitch aptamer (S box leader) RFAM:RF00162, SO:0000140 contig_1 cds 431911 433071 + GCA012955505_00530 aspB Aminotransferase COG:COG0436, COG:E, RefSeq:WP_011274817.1, SO:0001217, UniParc:UPI000054B77F, UniRef:UniRef100_Q4L974, UniRef:UniRef50_A0A2I7YAX0, UniRef:UniRef90_Q4L974 contig_1 cds 433104 434102 + GCA012955505_00531 ldhA D-lactate dehydrogenase COG:CHR, COG:COG1052, RefSeq:WP_011274818.1, SO:0001217, UniParc:UPI000054B780, UniRef:UniRef100_A0A7Z1SDY2, UniRef:UniRef50_A0A658WNB1, UniRef:UniRef90_A0A7Z1SDY2 contig_1 cds 434273 434479 - GCA012955505_00532 copZ copper chaperone CopZ COG:COG2608, COG:P, GO:0005507, GO:0005737, GO:0006825, RefSeq:WP_029376679.1, SO:0001217, UniParc:UPI00018132CC, UniRef:UniRef100_Q4L971, UniRef:UniRef50_Q4L971, UniRef:UniRef90_Q4L971 contig_1 cds 434568 436955 - GCA012955505_00533 copZ copper chaperone CopZ COG:COG2217, COG:P, EC:7.2.2.8, GO:0005507, GO:0005524, GO:0005886, GO:0016887, GO:0043682, GO:0046872, GO:0055070, GO:0140581, KEGG:K17686, RefSeq:WP_029376680.1, SO:0001217, UniParc:UPI000494B120, UniRef:UniRef100_UPI000494B120, UniRef:UniRef50_Q2FV64, UniRef:UniRef90_Q4L970 contig_1 cds 437161 437367 - GCA012955505_00534 hypothetical protein RefSeq:WP_011274822.1, SO:0001217, UniParc:UPI000054B784, UniRef:UniRef100_A0A2A1K978, UniRef:UniRef50_A0A364UNN2, UniRef:UniRef90_A0A2A1K978 contig_1 cds 437598 438467 + GCA012955505_00535 fabG NAD(P)-dependent oxidoreductase COG:COG1028, COG:I, RefSeq:WP_011274823.1, SO:0001217, UniParc:UPI000054B785, UniRef:UniRef100_Q4L968, UniRef:UniRef50_A0A0Q9YPH9, UniRef:UniRef90_Q4L968 contig_1 cds 438612 439190 + GCA012955505_00536 wbbJ Putative acetyltransferase SH0499 COG:COG0110, COG:R, EC:2.3.1.-, GO:0005829, GO:0008374, GO:0016407, KEGG:K00661, RefSeq:WP_011274824.1, SO:0001217, UniParc:UPI000054B786, UniRef:UniRef100_Q4L967, UniRef:UniRef50_Q4L967, UniRef:UniRef90_Q4L967 contig_1 cds 439361 440905 + GCA012955505_00537 pruA L-glutamate gamma-semialdehyde dehydrogenase COG:COG1012, COG:I, EC:1.2.1.88, GO:0003842, GO:0006537, GO:0006562, GO:0009898, GO:0010133, KEGG:K00294, RefSeq:WP_037536142.1, SO:0001217, UniParc:UPI00051DCD4B, UniRef:UniRef100_UPI00051DCD4B, UniRef:UniRef50_P94391, UniRef:UniRef90_Q4L966 contig_1 cds 441229 441540 + GCA012955505_00538 ISL3 family transposase SO:0001217, UniRef:UniRef50_A0A7Z1SC63, UniRef:UniRef90_A0A7Z1SC63 contig_1 cds 441626 442072 - GCA012955505_00539 phnB PhnB-like domain-containing protein COG:C, COG:COG2764, RefSeq:WP_037536140.1, SO:0001217, UniParc:UPI00051CC871, UniRef:UniRef100_UPI00051CC871, UniRef:UniRef50_Q2FV27, UniRef:UniRef90_Q4L964 contig_1 cds 442185 442733 - GCA012955505_00540 HTH tetR-type domain-containing protein RefSeq:WP_037536138.1, SO:0001217, UniParc:UPI00051D181C, UniRef:UniRef100_UPI00051D181C, UniRef:UniRef50_Q4L963, UniRef:UniRef90_Q4L963 contig_1 cds 442827 443297 + GCA012955505_00541 GIY-YIG domain-containing protein RefSeq:WP_011274829.1, SO:0001217, UniParc:UPI000054B78B, UniRef:UniRef100_A0A2A1KCC5, UniRef:UniRef50_Q4A0E1, UniRef:UniRef90_A0A2A1KCC5 contig_1 cds 443473 444423 + GCA012955505_00542 corA Magnesium transporter CorA COG:COG0598, COG:P, SO:0001217, UniRef:UniRef50_Q4L961, UniRef:UniRef90_Q4L961 contig_1 cds 444480 444797 - GCA012955505_00543 yrhK YrhK domain-containing protein RefSeq:WP_011274831.1, SO:0001217, UniParc:UPI000054B78D, UniRef:UniRef100_A0A2A1KED6, UniRef:UniRef50_G5JFT8, UniRef:UniRef90_A0A2A1KED6 contig_1 cds 444888 445409 + GCA012955505_00544 adaB Methylated-DNA--protein-cysteine methyltransferase COG:COG0350, COG:L, RefSeq:WP_011274832.1, SO:0001217, UniParc:UPI000054B78E, UniRef:UniRef100_Q4L959, UniRef:UniRef50_A0A3A5LJI7, UniRef:UniRef90_Q4L959 contig_1 cds 445498 445761 - GCA012955505_00545 hydroxymethylglutaryl-CoA synthase family protein SO:0001217, UniRef:UniRef50_UPI000990763F contig_1 cds 445865 446581 - GCA012955505_00546 hydroxymethylglutaryl-CoA synthase family protein SO:0001217, UniRef:UniRef50_UPI00272A8073 contig_1 cds 446923 447975 + GCA012955505_00547 paaJ putative acetyl-CoA acyltransferase COG:COG0183, COG:I, SO:0001217, UniRef:UniRef50_A2RJR9, UniRef:UniRef90_Q9FD81 contig_1 cds 447980 448102 + GCA012955505_00548 hypothetical protein contig_1 cds 448152 449111 + GCA012955505_00549 3-hydroxy-3-methylglutaryl-CoA reductase SO:0001217, UniRef:UniRef50_V8APS7 contig_1 cds 449273 449707 - GCA012955505_00550 CHAP domain-containing protein COG:COG3942, COG:M, RefSeq:WP_011274837.1, SO:0001217, UniParc:UPI000054B792, UniRef:UniRef100_A0A7Z1SDY7, UniRef:UniRef50_Q2FV81, UniRef:UniRef90_A0A7Z1SDY7 contig_1 ncRNA 450037 450304 - GCA012955505_00551 S35 Staphylococcus sRNA 35 (srn_0335) RFAM:RF02894, SO:0000655 contig_1 cds 450358 450573 - GCA012955505_00552 yozE YozE SAM-like domain-containing protein RefSeq:WP_016931242.1, SO:0001217, UniParc:UPI0002DB9916, UniRef:UniRef100_A0A2A1KAN0, UniRef:UniRef50_Q2FV82, UniRef:UniRef90_A0A7Z1SFA7 contig_1 cds 450738 450917 + GCA012955505_00553 lysR LysR family transcriptional regulator SO:0001217, UniRef:UniRef50_UPI0011A23671 contig_1 cds 451255 451557 + GCA012955505_00554 lysR (pseudo) LysR substrate-binding domain-containing protein SO:0001217, UniRef:UniRef50_A0AAP8KL31, UniRef:UniRef90_UPI0010E67AEB contig_1 cds 452154 452423 + GCA012955505_00555 hypothetical protein contig_1 cds 452389 454053 + GCA012955505_00556 ilvB pyruvate oxidase COG:COG0028, COG:EH, EC:1.2.3.3, GO:0000287, GO:0030976, KEGG:K00158, SO:0001217, UniRef:UniRef50_A0A0D0QSZ0, UniRef:UniRef90_A0A380FXI4 contig_1 cds 454161 454361 + GCA012955505_00557 (pseudo) Transposase family protein SO:0001217, UniRef:UniRef50_A0AAP4FJ14, UniRef:UniRef90_A0AAP4FJ14 contig_1 cds 454475 455158 + GCA012955505_00558 ISL3 family transposase GO:0004803, KEGG:K07485, SO:0001217, UniRef:UniRef50_F8WKJ2, UniRef:UniRef90_UPI0020C11370 contig_1 cds 455247 457274 + GCA012955505_00559 ptsG PTS system glucose-specific EIICBA component COG:COG2190, COG:G, EC:2.7.1.199, GO:0005886, GO:0008982, GO:0009401, GO:0016301, GO:0055056, GO:0090563, GO:1904659, RefSeq:WP_037538578.1, SO:0001217, UniParc:UPI00051D3262, UniRef:UniRef100_UPI00051D3262, UniRef:UniRef50_P20166, UniRef:UniRef90_Q4L945 contig_1 cds 457452 457916 - GCA012955505_00560 Oxidoreductase, zinc-binding dehydrogenase family protein SO:0001217, UniRef:UniRef50_A0A133RU63 contig_1 cds 458601 459557 - GCA012955505_00561 ldh L-lactate dehydrogenase COG:C, COG:COG0039, EC:1.1.1.27, GO:0004459, GO:0005737, GO:0006089, GO:0006096, RefSeq:WP_037538569.1, SO:0001217, UniParc:UPI00051DBCE1, UniRef:UniRef100_UPI00051DBCE1, UniRef:UniRef50_Q4L941, UniRef:UniRef90_Q4L941 contig_1 cds 459721 460692 + GCA012955505_00562 aes Alpha/beta hydrolase COG:COG0657, COG:I, RefSeq:WP_037538567.1, SO:0001217, UniParc:UPI00051D0502, UniRef:UniRef100_UPI00051D0502, UniRef:UniRef50_A0A3A3AIJ1, UniRef:UniRef90_A0A7Z1MYM5 contig_1 cds 460988 461590 - GCA012955505_00563 hypothetical protein PFAM:PF00892.27 contig_1 cds 461705 462019 + GCA012955505_00564 Transcriptional regulator SO:0001217, UniRef:UniRef50_A0A380FM17 contig_1 cds 461962 462474 + GCA012955505_00565 araC AraC family transcriptional regulator SO:0001217, UniRef:UniRef50_A0A2K0A5K8, UniRef:UniRef90_A0A2K0A5K8 contig_1 cds 462513 462788 - GCA012955505_00566 hypothetical protein SO:0001217, UniRef:UniRef50_A0A4Z1BBQ3 contig_1 cds 462858 464219 + GCA012955505_00567 pgsB poly-gamma-glutamate synthase PgsB COG:COG0770, COG:M, EC:6.3.2.-, GO:0016020, GO:0070501, KEGG:K01932, SO:0001217, UniRef:UniRef50_A0A654C625, UniRef:UniRef90_A0A2J9X1G4 contig_1 cds 464221 464673 + GCA012955505_00568 pgsC poly-gamma-glutamate biosynthesis protein PgsC GO:0016020, GO:0070501, KEGG:K22116, RefSeq:WP_016930802.1, SO:0001217, UniParc:UPI000315CDBB, UniRef:UniRef100_A0A640MWB8, UniRef:UniRef50_P96737, UniRef:UniRef90_Q5HL81 contig_1 cds 464697 465770 + GCA012955505_00569 capA CapA family protein COG:COG2843, COG:M, RefSeq:WP_037558799.1, SO:0001217, UniParc:UPI00045273ED, UniRef:UniRef100_A0A640MY16, UniRef:UniRef50_A0A1S1GWK0, UniRef:UniRef90_A0A2K0A5L3 contig_1 cds 465760 465921 + GCA012955505_00570 Secreted protein RefSeq:WP_161984724.1, SO:0001217, UniParc:UPI0002D753B5, UniRef:UniRef100_UPI0002D753B5, UniRef:UniRef50_Q4A0B1, UniRef:UniRef90_A0A7Z1MZU1 contig_1 cds 465923 467518 + GCA012955505_00571 ggt Gamma-glutamyltranspeptidase COG:COG0405, COG:E, RefSeq:WP_016930800.1, SO:0001217, UniParc:UPI000311B8B3, UniRef:UniRef100_A0A640MVZ4, UniRef:UniRef50_Q5HL84, UniRef:UniRef90_Q4L931 contig_1 cds 467854 469392 + GCA012955505_00572 Xylulose kinase SO:0001217, UniRef:UniRef50_Q8CR47 contig_1 cds 469805 470851 + GCA012955505_00573 frwC PTS sugar transporter subunit IIC COG:COG1299, COG:G, RefSeq:WP_016930797.1, SO:0001217, UniParc:UPI0002E3F69A, UniRef:UniRef100_A0A640MWE0, UniRef:UniRef50_Q2FV93, UniRef:UniRef90_A0A4Z1BF00 contig_1 cds 470854 471540 + GCA012955505_00574 sdaA L-serine deaminase COG:COG1760, COG:E, EC:4.3.1.17, KEGG:K01752, RefSeq:WP_011274863.1, SO:0001217, UniParc:UPI000054B7AC, UniRef:UniRef100_A0A640N0W9, UniRef:UniRef50_A0A0U1E0K5, UniRef:UniRef90_A0A640N0W9 contig_1 cds 471554 472435 + GCA012955505_00575 sdaAA L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha EC:4.3.1.17, GO:0003941, GO:0006094, GO:0006565, KEGG:K01752, SO:0001217, UniRef:UniRef50_A0AAN1D8A6, UniRef:UniRef90_A0A2K0A5M0 contig_1 cds 472735 473229 - GCA012955505_00576 mnaT N-acetyltransferase COG:COG1247, COG:E, EC:2.3.1.-, KEGG:K24217, RefSeq:WP_053032828.1, SO:0001217, UniParc:UPI00069CFBA1, UniRef:UniRef100_UPI00069CFBA1, UniRef:UniRef50_A0A380GAC2, UniRef:UniRef90_A0A7Z1MYN5 contig_1 cds 473361 473762 + GCA012955505_00577 LPXTG specific sortase A SO:0001217, UniRef:UniRef50_A0A380ENW9 contig_1 cds 473822 473950 + GCA012955505_00578 hypothetical protein contig_1 cds 474211 474441 + GCA012955505_00579 hypothetical protein PFAM:PF08282.18 contig_1 cds 474729 474836 + GCA012955505_00580 hypothetical protein contig_1 cds 474897 475874 - GCA012955505_00581 ldhA D-lactate dehydrogenase COG:CHR, COG:COG1052, EC:1.1.1.28, SO:0001217, UniRef:UniRef50_P63940, UniRef:UniRef90_Q4L921 contig_1 cds 476482 476688 + GCA012955505_00582 hypothetical protein SO:0001217, UniRef:UniRef50_UPI0031F3CC9B contig_1 cds 476930 478432 + GCA012955505_00583 Aldehyde dehydrogenase SO:0001217, UniRef:UniRef50_Q2G1J0, UniRef:UniRef90_A0A380FYG5 contig_1 cds 478616 479365 + GCA012955505_00584 phnD Phosphate/phosphite/phosphonate ABC transporter substrate-binding protein COG:COG3221, COG:P, KEGG:K02044, SO:0001217, UniRef:UniRef50_A0A380FWA2, UniRef:UniRef90_A0A5B2YS35 contig_1 cds 479718 480101 - GCA012955505_00585 VOC family protein SO:0001217, UniRef:UniRef50_UPI0001B3AA71 contig_1 cds 480104 480517 - GCA012955505_00586 VOC family protein SO:0001217, UniRef:UniRef50_UPI00210CB288, UniRef:UniRef90_UPI0018A6B001 contig_1 cds 480757 481044 - GCA012955505_00587 yidJ putative acetyltransferase, GNAT superfamily COG:COG2388, COG:R, SO:0001217, UniRef:UniRef50_Q4L916, UniRef:UniRef90_Q4L916 contig_1 cds 481208 482170 + GCA012955505_00588 znuA ABC transporter substrate-binding protein COG:COG0803, COG:P, RefSeq:WP_011274876.1, SO:0001217, UniParc:UPI000054B7B9, UniRef:UniRef100_Q4L915, UniRef:UniRef50_B9DL09, UniRef:UniRef90_Q4L915 contig_1 cds 482221 483648 - GCA012955505_00589 aldA aldehyde dehydrogenase COG:COG1012, COG:I, EC:1.2.1.-, GO:0016620, RefSeq:WP_049394712.1, SO:0001217, UniParc:UPI00066A9770, UniRef:UniRef100_UPI00066A9770, UniRef:UniRef50_A0A1D4HJ09, UniRef:UniRef90_A0A4Z1BNQ9 contig_1 cds 483826 483930 + GCA012955505_00590 hypothetical protein contig_1 cds 483924 484238 + GCA012955505_00591 marR (pseudo) MarR family transcriptional regulator COG:COG1846, COG:K, SO:0001217, UniRef:UniRef50_Q2FVA7, UniRef:UniRef90_A0A5B2YTW2 contig_1 cds 484302 485270 + GCA012955505_00592 catE Ring-cleaving dioxygenase COG:COG2514, COG:Q, KEGG:K15975, RefSeq:WP_011274879.1, SO:0001217, UniParc:UPI000054B7BC, UniRef:UniRef100_A0A640MX07, UniRef:UniRef50_F4BQ31, UniRef:UniRef90_A0A2K0A5N6 contig_1 cds 485286 486191 + GCA012955505_00593 gloA Ring-cleaving dioxygenase COG:COG0346, COG:Q, KEGG:K15975, RefSeq:WP_033079743.1, SO:0001217, UniParc:UPI000519F560, UniRef:UniRef100_A0A7Z1SA75, UniRef:UniRef50_A0A380GII2, UniRef:UniRef90_A0A7Z1SA75 contig_1 cds 486207 486800 + GCA012955505_00594 mhqD methylhydroquinone degradation carboxylesterase MhqD COG:COG0400, COG:R, RefSeq:WP_011274881.1, SO:0001217, UniParc:UPI000054B7BE, UniRef:UniRef100_A0A640MWX1, UniRef:UniRef50_Q2FVA9, UniRef:UniRef90_A0A2A1KG64 contig_1 cds 486861 487922 - GCA012955505_00595 ykvI Branched-chain amino acid transport system II carrier protein COG:COG3949, COG:S, RefSeq:WP_011274882.1, SO:0001217, UniParc:UPI000054B7BF, UniRef:UniRef100_A0A640MW76, UniRef:UniRef50_Q2FVB0, UniRef:UniRef90_A0A2K0A5N3 contig_1 cds 488082 489863 + GCA012955505_00596 nhaP Sodium/hydrogen exchanger family protein COG:COG0025, COG:P, RefSeq:WP_049394713.1, SO:0001217, UniParc:UPI00066AFF29, UniRef:UniRef100_UPI00066AFF29, UniRef:UniRef50_Q4A072, UniRef:UniRef90_A0A380FWW4 contig_1 cds 489889 491883 - GCA012955505_00597 fbp Fructose-1,6-bisphosphatase class 3 COG:COG3855, COG:G, EC:3.1.3.11, GO:0006094, GO:0042132, KEGG:K04041, SO:0001217, UniRef:UniRef50_Q2FVB2, UniRef:UniRef90_Q4L907 contig_1 cds 492074 492286 - GCA012955505_00598 hypothetical protein contig_1 cds 492432 492686 - GCA012955505_00599 dedA (pseudo) DedA family protein KEGG:K03975, SO:0001217, UniRef:UniRef50_A0A2X2M5V6, UniRef:UniRef90_UPI000851AC2F contig_1 cds 493087 493752 - GCA012955505_00600 thiF thiazole biosynthesis adenylyltransferase ThiF SO:0001217, UniRef:UniRef50_UPI000BE03256 contig_1 cds 493752 494519 - GCA012955505_00601 thiG Thiazole synthase COG:COG2022, COG:H, EC:2.8.1.10, GO:0005737, GO:0009229, GO:1990107, KEGG:K03149, RefSeq:WP_016930788.1, SO:0001217, UniParc:UPI0002D4ED98, UniRef:UniRef100_A0A640N150, UniRef:UniRef50_O31618, UniRef:UniRef90_Q8CN30 contig_1 cds 494521 494721 - GCA012955505_00602 thiS sulfur carrier protein ThiS COG:COG2104, COG:HJ, GO:0003824, GO:0009228, RefSeq:WP_011274888.1, SO:0001217, UniParc:UPI000054B7C5, UniRef:UniRef100_A0A640MXD9, UniRef:UniRef50_A0A7V7VEV5, UniRef:UniRef90_A0A2J8BEU6 contig_1 cds 494705 495820 - GCA012955505_00603 thiO glycine oxidase ThiO COG:COG0665, COG:E, EC:1.4.3.19, GO:0016647, GO:0050660, RefSeq:WP_011274889.1, SO:0001217, UniParc:UPI000054B7C6, UniRef:UniRef100_A0A640MX46, UniRef:UniRef50_A0A7X9WF51, UniRef:UniRef90_A0A5B2YZS8 contig_1 cds 495813 496406 - GCA012955505_00604 thiE Thiamine phosphate synthase COG:COG0352, COG:H, SO:0001217, UniParc:UPI000054B7C7, UniRef:UniRef100_A0A640N1Z3, UniRef:UniRef50_A0A512QN43, UniRef:UniRef90_A0A2K0A5P5 contig_1 ncRNA-region 496467 496576 - TPP riboswitch aptamer (THI element) RFAM:RF00059, SO:0000035 contig_1 cds 497060 498151 + GCA012955505_00605 uhpC MFS transporter COG:COG2271, COG:G, SO:0001217, UniRef:UniRef50_Q2FVB9, UniRef:UniRef90_A0A2K0A5P4 contig_1 cds 498393 498629 + GCA012955505_00606 Signal transduction protein TRAP SO:0001217, UniRef:UniRef50_A0A380FYY9 contig_1 cds 498674 499903 + GCA012955505_00607 yccC (pseudo) FUSC family protein COG:COG1289, COG:S, SO:0001217, UniRef:UniRef50_A0A853V3T2, UniRef:UniRef90_A0A5B2Z2X4 contig_1 cds 499918 500277 + GCA012955505_00608 hypothetical protein contig_1 cds 500349 500768 + GCA012955505_00609 ydaT DUF2188 domain-containing protein COG:COG4876, COG:S, RefSeq:WP_011274894.1, SO:0001217, UniParc:UPI000054B7CB, UniRef:UniRef100_Q4L8Z7, UniRef:UniRef50_Q4L8Z7, UniRef:UniRef90_Q4L8Z7 contig_1 cds 500933 501631 + GCA012955505_00610 yjbM GTP pyrophosphokinase COG:COG2357, COG:FT, RefSeq:WP_011274895.1, SO:0001217, UniParc:UPI000054B7CC, UniRef:UniRef100_A0A7Z1SA79, UniRef:UniRef50_A0A240A5W9, UniRef:UniRef90_A0A7Z1SA79 contig_1 cds 501774 502649 + GCA012955505_00611 menH Serine aminopeptidase S33 domain-containing protein COG:COG0596, COG:HR, RefSeq:WP_011274896.1, SO:0001217, UniParc:UPI000054B7CD, UniRef:UniRef100_Q4L8Z5, UniRef:UniRef50_A0A4Z1BIG3, UniRef:UniRef90_Q4L8Z5 contig_1 cds 502742 503464 + GCA012955505_00612 soxR HTH merR-type domain-containing protein COG:COG0789, COG:K, RefSeq:WP_011274897.1, SO:0001217, UniParc:UPI000054B7CE, UniRef:UniRef100_Q4L8Z4, UniRef:UniRef50_Q4L8Z4, UniRef:UniRef90_Q4L8Z4 contig_1 cds 503602 504249 + GCA012955505_00613 gntR GntR family transcriptional regulator KEGG:K11476, SO:0001217, UniRef:UniRef50_A0A239YRW4, UniRef:UniRef90_A0A2K0A5P6 contig_1 cds 504271 504504 + GCA012955505_00614 FGGY family carbohydrate kinase SO:0001217, UniRef:UniRef50_UPI002816275F contig_1 cds 504549 505808 + GCA012955505_00615 gntK gluconokinase COG:COG1070, COG:G, EC:2.7.1.12, GO:0009255, GO:0019521, GO:0046316, KEGG:K25031, SO:0001217, UniRef:UniRef50_A0A2X0R072, UniRef:UniRef90_A0A380FYE7 contig_1 cds 505849 506145 + GCA012955505_00616 hypothetical protein contig_1 cds 506088 507224 + GCA012955505_00617 gntT Gluconate permease COG:COG2610, COG:G, SO:0001217, UniRef:UniRef50_O31862, UniRef:UniRef90_Q4L8Z0 contig_1 cds 507730 508596 + GCA012955505_00618 galU UTP--glucose-1-phosphate uridylyltransferase GalU COG:COG1210, COG:M, EC:2.7.7.9, GO:0003983, GO:0006011, GO:0009246, KEGG:K00963, RefSeq:WP_011274904.1, SO:0001217, UniParc:UPI000054B7D5, UniRef:UniRef100_Q4L8Y7, UniRef:UniRef50_Q2G1T6, UniRef:UniRef90_Q4L8Y7 contig_1 gap 509144 509153 . contig_1 cds 509197 509388 + GCA012955505_00619 HTH cro/C1-type domain-containing protein RefSeq:WP_011274908.1, SO:0001217, UniParc:UPI000054B7D9, UniRef:UniRef100_A0A640MYJ6, UniRef:UniRef50_S2YA76, UniRef:UniRef90_A0A380FW08 contig_1 cds 509540 509704 - GCA012955505_00620 hypothetical protein contig_1 cds 509973 510635 + GCA012955505_00621 ydfG putative oxidoreductase SH0585 COG:C, COG:COG4221, EC:1.-.-.-, GO:0016491, SO:0001217, UniRef:UniRef50_Q2FVD5, UniRef:UniRef90_Q4L8Y1 contig_1 cds 510641 511297 + GCA012955505_00622 Acetylornithine deacetylase SO:0001217, UniRef:UniRef50_A0A4Q9W4A9 contig_1 cds 511323 511739 + GCA012955505_00623 peptidase dimerization domain-containing protein SO:0001217, UniRef:UniRef50_UPI0021F094CC contig_1 cds 511908 512222 - GCA012955505_00624 Polyphosphate kinase SO:0001217, UniRef:UniRef50_A0A380FKU6 contig_1 cds 512329 514074 - GCA012955505_00625 Polyphosphate kinase SO:0001217, UniRef:UniRef50_Q5HLE0 contig_1 cds 514171 515622 - GCA012955505_00626 ppx exopolyphosphatase COG:COG0248, COG:FT, EC:3.6.1.11, EC:3.6.1.40, GO:0000287, GO:0004309, GO:0006798, KEGG:K01524, SO:0001217, UniRef:UniRef50_A0A166QCY1, UniRef:UniRef90_Q4L8X8 contig_1 cds 516202 516444 - GCA012955505_00627 hypothetical protein contig_1 cds 516493 516921 - GCA012955505_00628 hypothetical protein contig_1 cds 517093 517272 - GCA012955505_00629 abgT AbgT family transporter SO:0001217, UniRef:UniRef50_UPI0015C3DFB2 contig_1 cds 517541 518359 + GCA012955505_00630 fabG SDR family oxidoreductase COG:COG1028, COG:I, RefSeq:WP_016930773.1, SO:0001217, UniParc:UPI0002D7DB00, UniRef:UniRef100_A0A2A1KAW9, UniRef:UniRef50_P46331, UniRef:UniRef90_A0A380FZ07 contig_1 cds 518554 519003 - GCA012955505_00631 frvX (pseudo) Peptidase M28 COG:COG1363, COG:EG, SO:0001217, UniRef:UniRef50_A0A390YIZ1, UniRef:UniRef90_Q4L8X5 contig_1 cds 519058 519252 - GCA012955505_00632 hypothetical protein contig_1 cds 519420 519881 + GCA012955505_00633 yehR DUF1307 domain-containing protein COG:COG4808, COG:S, RefSeq:WP_016930771.1, SO:0001217, UniParc:UPI0002E1DDAD, UniRef:UniRef100_A0A640MX58, UniRef:UniRef50_Q4L8X4, UniRef:UniRef90_Q4L8X4 contig_1 cds 519942 521228 - GCA012955505_00634 mET17 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase COG:COG2873, COG:E, RefSeq:WP_016930770.1, SO:0001217, UniParc:UPI0002F7316B, UniRef:UniRef100_A0A640N1F4, UniRef:UniRef50_A0A1V6F2H7, UniRef:UniRef90_A0A2K4DST3 contig_1 cds 521502 523082 - GCA012955505_00635 gltB2 Glutamate synthase domain-containing protein COG:COG0069, COG:E, SO:0001217, UniParc:UPI0002E3EA71, UniRef:UniRef100_A0A640MXQ0, UniRef:UniRef50_O34849, UniRef:UniRef90_Q4L8X2 contig_1 cds 523268 524050 + GCA012955505_00636 lnsB CPBP family lipoprotein N-acylation protein LnsB EC:2.3.1.-, KEGG:K27958, RefSeq:WP_016930768.1, SO:0001217, UniParc:UPI0002DCDE6A, UniRef:UniRef100_A0A640MWK3, UniRef:UniRef50_Q4L8X1, UniRef:UniRef90_Q4L8X1 contig_1 cds 524106 524906 + GCA012955505_00637 ydiL CPBP family intramembrane metalloprotease COG:COG1266, COG:O, RefSeq:WP_016930767.1, SO:0001217, UniParc:UPI0002FBDF1B, UniRef:UniRef100_A0A640N2A3, UniRef:UniRef50_Q4L8X0, UniRef:UniRef90_Q4L8X0 contig_1 cds 525066 525728 + GCA012955505_00638 fetA ATP-binding cassette domain-containing protein COG:COG4619, COG:P, RefSeq:WP_011274922.1, SO:0001217, UniParc:UPI000054B7E7, UniRef:UniRef100_A0AB38PCG5, UniRef:UniRef50_A0A0D0SPN6, UniRef:UniRef90_A0A5B2Z1E4 contig_1 cds 525721 526515 + GCA012955505_00639 fetB Iron export ABC transporter permease subunit FetB COG:COG0390, COG:P, KEGG:K02069, RefSeq:WP_011274923.1, SO:0001217, UniParc:UPI000054B7E8, UniRef:UniRef100_A0A7Z1N0X7, UniRef:UniRef50_A0A0D0SFV4, UniRef:UniRef90_A0A640N1H4 contig_1 cds 526570 528036 - GCA012955505_00640 baeS histidine kinase COG:COG0642, COG:T, RefSeq:WP_016930766.1, SO:0001217, UniParc:UPI0002D45021, UniRef:UniRef100_A0A7Z1N0W5, UniRef:UniRef50_A0A380FY24, UniRef:UniRef90_A0A640MWS5 contig_1 cds 528026 528640 - GCA012955505_00641 DNA-binding response regulator SO:0001217, UniRef:UniRef50_K9ARG6 contig_1 cds 528963 530141 + GCA012955505_00642 araJ MFS transporter COG:COG2814, COG:G, KEGG:K18567, SO:0001217, UniRef:UniRef50_Q2FVG2, UniRef:UniRef90_A0A2A1KGE0 contig_1 cds 530317 531666 - GCA012955505_00643 pnbA Carboxylic ester hydrolase COG:COG2272, COG:I, RefSeq:WP_016930763.1, SO:0001217, UniParc:UPI00030CB5B5, UniRef:UniRef100_UPI00030CB5B5, UniRef:UniRef50_A0A0H2WZR3, UniRef:UniRef90_A0A2A1KEQ5 contig_1 cds 531794 533458 - GCA012955505_00644 potE Amino acid transporter COG:COG0531, COG:E, RefSeq:WP_011274928.1, SO:0001217, UniParc:UPI000054B7ED, UniRef:UniRef100_A0A640MXU0, UniRef:UniRef50_A0A4U9TDF7, UniRef:UniRef90_A0A380FWE4 contig_1 cds 533644 534243 + GCA012955505_00645 ydeI YdhG-like domain-containing protein COG:COG4430, COG:S, RefSeq:WP_016930762.1, SO:0001217, UniParc:UPI0002DA553F, UniRef:UniRef100_UPI0034D47C12, UniRef:UniRef50_A0A1E9A998, UniRef:UniRef90_A0A2K0A5T1 contig_1 cds 534339 535382 - GCA012955505_00646 tdh Zinc dependent dehydrogenase COG:COG1063, COG:ER, RefSeq:WP_011274930.1, SO:0001217, UniParc:UPI000054B7EF, UniRef:UniRef100_A0A640N2F0, UniRef:UniRef50_A0A7W8CVP1, UniRef:UniRef90_A0A380FXL2 contig_1 cds 535814 537121 + GCA012955505_00647 opuBA Quaternary amine transport ATP-binding protein COG:COG1125, COG:E, RefSeq:WP_016930761.1, SO:0001217, UniParc:UPI0002D978EF, UniRef:UniRef100_A0A640MXB8, UniRef:UniRef50_Q4L8W0, UniRef:UniRef90_Q4L8W0 contig_1 cds 537121 537756 + GCA012955505_00648 opuBB ABC transporter permease COG:COG1174, COG:E, RefSeq:WP_011274932.1, SO:0001217, UniParc:UPI000054B7F1, UniRef:UniRef100_A0A640N1L9, UniRef:UniRef50_O34878, UniRef:UniRef90_A0A4Q9WJ49 contig_1 cds 537781 538221 + GCA012955505_00649 glycine betaine ABC transporter substrate-binding protein SO:0001217, UniRef:UniRef50_UPI0029E8119A, UniRef:UniRef90_UPI0030F4536A contig_1 cds 538266 538688 + GCA012955505_00650 osmF (pseudo) Osmoprotectant ABC transporter substrate-binding protein COG:COG1732, COG:M, SO:0001217, UniRef:UniRef50_G2JZ42, UniRef:UniRef90_A0A2K0A5T7 contig_1 cds 538688 539374 + GCA012955505_00651 opuBB Glycine betaine/carnitine/choline ABC transporter COG:COG1174, COG:E, RefSeq:WP_011274934.1, SO:0001217, UniParc:UPI000054B7F3, UniRef:UniRef100_A0A640MXL8, UniRef:UniRef50_P39775, UniRef:UniRef90_A0A380FZ30 contig_1 cds 539434 540132 - GCA012955505_00652 lrgB Antiholin-like protein LrgB SO:0001217, UniRef:UniRef50_P60643 contig_1 cds 540101 540556 - GCA012955505_00653 lrgA antiholin-like murein hydrolase modulator LrgA COG:COG1380, COG:R, KEGG:K05338, RefSeq:WP_011274936.1, SO:0001217, UniParc:UPI000054B7F5, UniRef:UniRef100_A0A640MXI3, UniRef:UniRef50_Q8CN54, UniRef:UniRef90_A0A5B2Z309 contig_1 cds 540829 541599 - GCA012955505_00654 lytR response regulator transcription factor LytR COG:COG3279, COG:KT, GO:0000156, GO:0003677, GO:0005737, RefSeq:WP_011274937.1, SO:0001217, UniParc:UPI000054B7F6, UniRef:UniRef100_Q4L8V4, UniRef:UniRef50_P60611, UniRef:UniRef90_Q4L8V4 contig_1 cds 541600 543354 - GCA012955505_00655 lytS Sensor protein LytS COG:COG3275, COG:T, EC:2.7.13.3, GO:0000155, GO:0005524, GO:0005886, GO:0071555, KEGG:K07704, RefSeq:WP_016930759.1, SO:0001217, UniParc:UPI0003063B5A, UniRef:UniRef100_UPI0003063B5A, UniRef:UniRef50_Q53705, UniRef:UniRef90_Q4L8V3 contig_1 cds 543789 545183 + GCA012955505_00656 uhpC Quinolone resistance protein NorB COG:COG2271, COG:G, KEGG:K08170, RefSeq:WP_011274939.1, SO:0001217, UniParc:UPI000054B7F8, UniRef:UniRef100_A0A640MYX9, UniRef:UniRef50_Q2FYJ5, UniRef:UniRef90_A0A2K0A5U0 contig_1 cds 545367 546299 + GCA012955505_00657 panE 2-dehydropantoate 2-reductase COG:COG1893, COG:H, RefSeq:WP_016930758.1, SO:0001217, UniParc:UPI0002D748E8, UniRef:UniRef100_A0A640MXK2, UniRef:UniRef50_A0A0U1EBN6, UniRef:UniRef90_Q4L8V1 contig_1 cds 546584 547057 + GCA012955505_00658 yagU DUF1440 domain-containing protein COG:COG3477, COG:S, RefSeq:WP_016930757.1, SO:0001217, UniParc:UPI0002F16EA4, UniRef:UniRef100_A0A640MWS9, UniRef:UniRef50_G5JKH0, UniRef:UniRef90_Q4L8U9 contig_1 cds 547113 547964 + GCA012955505_00659 wcaG NAD-dependent epimerase/dehydratase domain-containing protein COG:COG0451, COG:M, RefSeq:WP_033079725.1, SO:0001217, UniParc:UPI00051A1E6D, UniRef:UniRef100_A0A640N2K7, UniRef:UniRef50_B9DIE7, UniRef:UniRef90_Q4L8U8 contig_1 cds 548051 548884 - GCA012955505_00660 yidC Membrane insertase YidC/Oxa/ALB C-terminal domain-containing protein COG:COG0706, COG:M, KEGG:K03217, RefSeq:WP_136719851.1, SO:0001217, UniParc:UPI0010AD1220, UniRef:UniRef100_UPI0010AD1220, UniRef:UniRef50_Q5HLG6, UniRef:UniRef90_A0A2K0A5T8 contig_1 cds 548885 550387 - GCA012955505_00661 ampC Serine hydrolase FLP COG:COG1680, COG:V, SO:0001217, UniRef:UniRef50_A0A853V0Q8, UniRef:UniRef90_A0A2A1KCU3 contig_1 cds 550666 552492 + GCA012955505_00662 potE APC family permease COG:COG0531, COG:E, RefSeq:WP_011274946.1, SO:0001217, UniParc:UPI000054B7FF, UniRef:UniRef100_A0A640MX02, UniRef:UniRef50_P96589, UniRef:UniRef90_A0A2K0A5T4 contig_1 cds 552553 552867 - GCA012955505_00663 hypothetical protein SO:0001217, UniRef:UniRef50_UPI001E2CBD9B contig_1 cds 553108 554442 - GCA012955505_00664 Na+/H+ antiporter SO:0001217, UniRef:UniRef50_A0A2X2K318 contig_1 cds 554734 556134 - GCA012955505_00665 ansP Amino acid permease COG:COG1113, COG:E, RefSeq:WP_011274948.1, SO:0001217, UniParc:UPI000054B801, UniRef:UniRef100_A0A640MWU8, UniRef:UniRef50_Q2FXN2, UniRef:UniRef90_A0A2K0A5T9 contig_1 cds 556370 557188 + GCA012955505_00666 sbcD Phosphohydrolase COG:COG0420, COG:L, RefSeq:WP_053035174.1, SO:0001217, UniParc:UPI00069F5EB4, UniRef:UniRef100_UPI00069F5EB4, UniRef:UniRef50_Q2FVI2, UniRef:UniRef90_A0A2A1KB48 contig_1 cds 557246 557869 - GCA012955505_00667 yvpB Peptidase C39-like domain-containing protein COG:COG4990, COG:R, RefSeq:WP_011274950.1, SO:0001217, UniParc:UPI000054B803, UniRef:UniRef100_A0A640MXI9, UniRef:UniRef50_Q2FVI3, UniRef:UniRef90_A0A2K0A5U6 contig_1 cds 558010 558492 + GCA012955505_00668 araC AraC family transcriptional regulator COG:COG3708, COG:K, RefSeq:WP_011274951.1, SO:0001217, UniParc:UPI000054B804, UniRef:UniRef100_A0A640MWV7, UniRef:UniRef50_A0A2K0A5V1, UniRef:UniRef90_A0A2K0A5V1 contig_1 cds 558604 559362 - GCA012955505_00669 ubiE SAM-dependent methyltransferase COG:COG2226, COG:HJ, SO:0001217, UniParc:UPI00044AEABE, UniRef:UniRef100_A0A640MX21, UniRef:UniRef50_A0A131JTX0, UniRef:UniRef90_A0A2A1KDI2 contig_1 cds 559380 560048 - GCA012955505_00670 scdA iron-sulfur cluster repair di-iron protein ScdA COG:COG2846, COG:O, GO:0005737, GO:0006979, GO:0030091, GO:0046872, GO:0051409, RefSeq:WP_011274953.1, SO:0001217, UniParc:UPI000054B806, UniRef:UniRef100_Q4L8T8, UniRef:UniRef50_P72360, UniRef:UniRef90_Q4L8T8 contig_1 cds 560310 561509 - GCA012955505_00671 araJ Bcr/CflA family efflux transporter COG:COG2814, COG:G, KEGG:K07552, RefSeq:WP_049425835.1, SO:0001217, UniParc:UPI00066C128E, UniRef:UniRef100_UPI00066C128E, UniRef:UniRef50_Q2FVI5, UniRef:UniRef90_A0A2K0A5V0 contig_1 cds 561653 562354 - GCA012955505_00672 hypothetical protein SO:0001217, UniRef:UniRef50_Q2FVI6, UniRef:UniRef90_A0A2A1KCV5 contig_1 cds 562372 563469 - GCA012955505_00673 glxK Glycerate kinase COG:COG1929, COG:G, SO:0001217, UniRef:UniRef50_Q9Z9P2, UniRef:UniRef90_Q4L8T5 contig_1 cds 563648 563902 + GCA012955505_00674 (pseudo) hypothetical protein SO:0001217, UniRef:UniRef50_UPI000AE54ECA, UniRef:UniRef90_UPI000AE54ECA contig_1 cds 564604 564801 + GCA012955505_00675 hypothetical protein contig_1 cds 564831 564986 + GCA012955505_00676 hypothetical protein contig_1 cds 565300 566169 + GCA012955505_00677 fieF Cation transporter COG:COG0053, COG:P, KEGG:K13283, SO:0001217, UniRef:UniRef50_Q2FVK7, UniRef:UniRef90_A0A2K0A5U7 contig_1 cds 566784 567329 - GCA012955505_00678 Transglycosylase SO:0001217, UniRef:UniRef50_A0A2K0A5V6 contig_1 cds 567882 568415 + GCA012955505_00679 hypothetical protein PFAM:PF00300.27 contig_1 cds 568626 568739 - GCA012955505_00680 Metal homeostasis protein RefSeq:WP_011274962.1, SO:0001217, UniParc:UPI000054B80F, UniRef:UniRef100_A0A640MY79, UniRef:UniRef50_Q5HLI1, UniRef:UniRef90_A0A2K4DTF7 contig_1 cds 568890 569339 + GCA012955505_00681 Putative transport system protein SO:0001217, UniRef:UniRef50_A0A380GYR9 contig_1 cds 569345 569587 - GCA012955505_00682 hypothetical protein contig_1 cds 569652 570419 + GCA012955505_00683 Putative transport system protein SO:0001217, UniRef:UniRef50_A0A380GYR5 contig_1 cds 570556 571356 + GCA012955505_00684 hisJ Cysteine ABC transporter substrate-binding protein COG:COG0834, COG:ET, RefSeq:WP_011274964.1, SO:0001217, UniParc:UPI000054B811, UniRef:UniRef100_A0A640N2U1, UniRef:UniRef50_B9DL83, UniRef:UniRef90_A0A380FY71 contig_1 cds 571337 572056 + GCA012955505_00685 hisM Cystine transport system permease protein COG:COG0765, COG:E, RefSeq:WP_029376620.1, SO:0001217, UniParc:UPI0002E1F393, UniRef:UniRef100_A0A640MXP9, UniRef:UniRef50_B9DL82, UniRef:UniRef90_A0A380FZ58 contig_1 cds 572053 572784 + GCA012955505_00686 glnQ Amino acid ABC transporter ATP-binding protein COG:COG1126, COG:E, RefSeq:WP_011274966.1, SO:0001217, UniParc:UPI000054B813, UniRef:UniRef100_A0A640N1X9, UniRef:UniRef50_A0A564T2N1, UniRef:UniRef90_A0A380FX34 contig_1 cds 572850 573053 - GCA012955505_00687 UDP-N-acetylmuramoylpentapeptide-glycine glycyltransferase SO:0001217, UniRef:UniRef50_A0A380EIW3 contig_1 cds 573050 574024 - GCA012955505_00688 femA Aminoacyltransferase FemA SO:0001217, UniRef:UniRef50_B9DMC1 contig_1 cds 574382 574738 + GCA012955505_00689 hypothetical protein PFAM:PF13462.12 contig_1 cds 575214 576023 + GCA012955505_00690 ABC transporter substrate-binding protein SO:0001217, UniRef:UniRef50_B9DL09 contig_1 cds 576025 576195 + GCA012955505_00691 hypothetical protein contig_1 cds 576261 576680 + GCA012955505_00692 ZinT/AdcA family metal-binding protein SO:0001217, UniRef:UniRef50_UPI0011A26D9E contig_1 cds 576818 577333 + GCA012955505_00693 yceI Polyisoprenoid-binding protein COG:COG2353, COG:R, RefSeq:WP_011274971.1, SO:0001217, UniParc:UPI000054B818, UniRef:UniRef100_A0A640N1Z5, UniRef:UniRef50_Q2FUS9, UniRef:UniRef90_A0A2A1KB67 contig_1 cds 577483 577962 + GCA012955505_00694 yndB Glutathione S-transferase COG:COG3832, COG:I, RefSeq:WP_011274972.1, SO:0001217, UniParc:UPI000054B819, UniRef:UniRef100_A0A640MYC1, UniRef:UniRef50_Q5HLI9, UniRef:UniRef90_A0A640MYC1 contig_1 cds 578023 578205 + GCA012955505_00695 CPBP family intramembrane metalloprotease RefSeq:WP_011274973.1, SO:0001217, UniParc:UPI000054B81A, UniRef:UniRef100_A0A640MY13, UniRef:UniRef50_A0A9X4L3A4, UniRef:UniRef90_A0A640MY13 contig_1 cds 578347 579168 + GCA012955505_00696 focA Formate/nitrite transporter COG:COG2116, COG:P, RefSeq:WP_011274974.1, SO:0001217, UniParc:UPI000054B81B, UniRef:UniRef100_A0A640N2Z2, UniRef:UniRef50_Q2G1V0, UniRef:UniRef90_A0A2K0A5W3 contig_1 cds 579360 579500 + GCA012955505_00697 hypothetical protein contig_1 cds 579554 580054 + GCA012955505_00698 sirohydrochlorin chelatase SO:0001217, UniRef:UniRef50_UPI003524B71E contig_1 cds 580268 582685 + GCA012955505_00699 nirB Nitrite reductase COG:C, COG:COG1251, SO:0001217, UniRef:UniRef50_A0A380G539, UniRef:UniRef90_A0A380FXR6 contig_1 cds 582689 583003 + GCA012955505_00700 nirD Assimilatory nitrite reductase COG:COG2146, COG:PQ, EC:1.7.1.4, KEGG:K26138, RefSeq:WP_011274977.1, SO:0001217, UniParc:UPI000054B81E, UniRef:UniRef100_A0A640MYE4, UniRef:UniRef50_A0A3A3AHT4, UniRef:UniRef90_A0A380FYN1 contig_1 cds 582994 583938 + GCA012955505_00701 cysG uroporphyrinogen-III C-methyltransferase COG:COG0007, COG:H, RefSeq:WP_011274978.1, SO:0001217, UniParc:UPI000054B81F, UniRef:UniRef100_A0A640MY33, UniRef:UniRef50_A0A3A5LVF3, UniRef:UniRef90_A0A2K0A5W9 contig_1 cds 584145 587828 + GCA012955505_00702 narG nitrate reductase subunit alpha COG:COG5013, COG:CP, EC:1.7.5.1, EC:1.7.99.-, EC:1.7.99.4, GO:0008940, GO:0009325, GO:0042126, KEGG:K00370, RefSeq:WP_011274979.1, SO:0001217, UniParc:UPI000054B820, UniRef:UniRef100_A0A2A1KEX4, UniRef:UniRef50_A0A127FDB7, UniRef:UniRef90_Q5HLK0 contig_1 cds 587818 589371 + GCA012955505_00703 narH nitrate reductase subunit beta COG:COG1140, COG:CP, EC:1.7.5.1, EC:1.7.99.-, EC:1.7.99.4, GO:0008940, GO:0009325, GO:0042126, KEGG:K00371, RefSeq:WP_011274980.1, SO:0001217, UniParc:UPI000054B821, UniRef:UniRef100_A0A640MXW6, UniRef:UniRef50_P11349, UniRef:UniRef90_Q5HLK1 contig_1 cds 589364 589939 + GCA012955505_00704 narJ nitrate reductase molybdenum cofactor assembly chaperone COG:COG2180, COG:CPO, GO:0051082, GO:0051131, RefSeq:WP_011274981.1, SO:0001217, UniParc:UPI000054B822, UniRef:UniRef100_A0A640MX72, UniRef:UniRef50_A0A0D0RML2, UniRef:UniRef90_A0A380FX53 contig_1 cds 589932 590615 + GCA012955505_00705 narI respiratory nitrate reductase subunit gamma COG:COG2181, COG:CP, EC:1.7.99.4, GO:0008940, GO:0009325, GO:0019645, RefSeq:WP_011274982.1, SO:0001217, UniParc:UPI000054B823, UniRef:UniRef100_A0A640N324, UniRef:UniRef50_A0AA43RY11, UniRef:UniRef90_A0A3S7GZZ6 contig_1 cds 590612 591085 + GCA012955505_00706 nreA nitrate respiration regulation accessory nitrate sensor NreA KEGG:K10851, SO:0001217, UniRef:UniRef50_Q2FVM5, UniRef:UniRef90_A0A2K0A5X8 contig_1 cds 591095 592129 + GCA012955505_00707 nreB nitrate respiration regulation sensor histidine kinase NreB BlastRules:WP_000606551, BlastRules:WP_011274984, BlastRules:WP_015901131, COG:COG4585, COG:T, EC:2.7.13.3, GO:0000155, GO:0005506, GO:0005524, GO:0005737, GO:0016020, GO:0046983, GO:0051539, KEGG:K07683, RefSeq:WP_011274984.1, SO:0001217, UniParc:UPI000054B825, UniRef:UniRef100_Q4L8Q7, UniRef:UniRef50_Q7WZY5, UniRef:UniRef90_Q4L8Q7 contig_1 cds 592133 592804 + GCA012955505_00708 nreC nitrate respiration regulation response regulator NreC BlastRules:WP_015901130, BlastRules:WP_016911488, SO:0001217, UniRef:UniRef50_Q7WZY4, UniRef:UniRef90_A0A2T4KJI7 contig_1 cds 593034 594191 + GCA012955505_00709 narT putative nitrate transporter NarT COG:COG2223, COG:P, GO:0005886, GO:0015112, GO:0042128, KEGG:K10850, RefSeq:WP_011274986.1, SO:0001217, UniParc:UPI000054B827, UniRef:UniRef100_Q4L8Q5, UniRef:UniRef50_Q2FVN1, UniRef:UniRef90_Q4L8Q5 contig_1 cds 594270 594653 - GCA012955505_00710 ibpA Heat-shock protein Hsp20 COG:COG0071, COG:O, SO:0001217, UniRef:UniRef50_A0A7X9WBX3, UniRef:UniRef90_A0A2A1KCY4 contig_1 cds 594874 595317 - GCA012955505_00711 sarZ HTH-type transcriptional regulator SarZ COG:COG1846, COG:K, GO:0003677, GO:0003700, GO:0005737, RefSeq:WP_011274988.1, SO:0001217, UniParc:UPI000054B829, UniRef:UniRef100_Q4L8Q3, UniRef:UniRef50_Q2FVN3, UniRef:UniRef90_Q4L8Q3 contig_1 cds 595797 595922 + GCA012955505_00712 hypothetical protein contig_1 cds 596130 597407 + GCA012955505_00713 gltT Proton/sodium-glutamate symport protein GltT COG:C, COG:COG1301, KEGG:K11102, RefSeq:WP_011274991.1, SO:0001217, UniParc:UPI000054B82C, UniRef:UniRef100_A0A640MXP1, UniRef:UniRef50_P24943, UniRef:UniRef90_A0A640MXP1 contig_1 cds 597555 597908 - GCA012955505_00714 DUF4889 domain-containing protein RefSeq:WP_011274992.1, SO:0001217, UniParc:UPI000054B82D, UniRef:UniRef100_A0A640MXA0, UniRef:UniRef50_Q2FVN6, UniRef:UniRef90_A0A2K0A5Y4 contig_1 cds 598197 598412 - GCA012955505_00715 pyridoxamine 5'-phosphate oxidase family protein SO:0001217, UniRef:UniRef50_UPI00193A8EAD contig_1 cds 598547 599443 - GCA012955505_00716 rsp AraC family transcriptional regulator Rsp GO:0003700, GO:0006355, GO:0043565, SO:0001217, UniRef:UniRef50_UPI0021B46E5C, UniRef:UniRef90_UPI0021B46E5C contig_1 cds 599486 600127 - GCA012955505_00717 rsp (pseudo) AraC family transcriptional regulator Rsp GO:0003700, GO:0006355, GO:0043565, SO:0001217, UniRef:UniRef50_UPI0021B4D156, UniRef:UniRef90_UPI0021B4D156 contig_1 cds 600181 600429 - GCA012955505_00718 (pseudo) hypothetical protein SO:0001217, UniRef:UniRef50_UPI002887CD48, UniRef:UniRef90_UPI002887CD48 contig_1 cds 601200 601574 - GCA012955505_00719 ybgA DUF1722 domain-containing protein COG:COG3272, COG:S, RefSeq:WP_011274995.1, SO:0001217, UniParc:UPI000054B830, UniRef:UniRef100_A0A640N3K5, UniRef:UniRef50_G5JKL1, UniRef:UniRef90_A0A640N3K5 contig_1 cds 601753 603195 + GCA012955505_00720 ptsG2 protein-N(pi)-phosphohistidine--sucrose phosphotransferase COG:COG1264, COG:G, RefSeq:WP_049426534.1, SO:0001217, UniParc:UPI00066EDA86, UniRef:UniRef100_UPI00066EDA86, UniRef:UniRef50_P51184, UniRef:UniRef90_Q4L8P5 contig_1 cds 603255 604196 - GCA012955505_00721 corA Magnesium transporter CorA family protein COG:COG0598, COG:P, RefSeq:WP_011274997.1, SO:0001217, UniParc:UPI000054B832, UniRef:UniRef100_A0A640MYU8, UniRef:UniRef50_Q2FVP2, UniRef:UniRef90_A0A1L8Y777 contig_1 cds 604228 604461 - GCA012955505_00722 acrR TetR/AcrR family transcriptional regulator COG:COG1309, COG:K, RefSeq:WP_176746104.1, SO:0001217, UniParc:UPI00159F5D40, UniRef:UniRef100_A0A640MYJ2, UniRef:UniRef50_Q2FVP3, UniRef:UniRef90_A0A6N0I1G6 contig_1 cds 604433 604750 - GCA012955505_00723 tetR Transcriptional regulator, TetR family SO:0001217, UniRef:UniRef50_A0A380DTA6 contig_1 cds 604916 605260 + GCA012955505_00724 ABC-2 type transporter transmembrane domain-containing protein SO:0001217, UniRef:UniRef50_A0A974KZ54 contig_1 cds 605257 606165 + GCA012955505_00725 ABC transporter permease SO:0001217, UniRef:UniRef50_A0A380FML9, UniRef:UniRef90_UPI0015D83A89 contig_1 cds 606324 606752 + GCA012955505_00726 mepR Multidrug efflux transporter transcriptional repressor MepR COG:COG1846, COG:K, KEGG:K18909, RefSeq:WP_011275000.1, SO:0001217, UniParc:UPI000054B835, UniRef:UniRef100_A0A640MYH8, UniRef:UniRef50_A0A380G542, UniRef:UniRef90_A0A640MYH8 contig_1 cds 606866 607132 + GCA012955505_00727 (pseudo) Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps SO:0001217, UniRef:UniRef50_A0A380DJY5, UniRef:UniRef90_A0A380DJY5 contig_1 cds 607176 608219 + GCA012955505_00728 mepA Multidrug efflux MATE transporter MepA SO:0001217, UniRef:UniRef50_A0A380DM36, UniRef:UniRef90_A0A640N3N3 contig_1 cds 608465 609712 + GCA012955505_00729 copC CopC domain-containing protein COG:COG2372, COG:P, KEGG:K14166, RefSeq:WP_053017269.1, SO:0001217, UniParc:UPI00069E1751, UniRef:UniRef100_UPI00069E1751, UniRef:UniRef50_A0A380FX74, UniRef:UniRef90_A0A640MYE3 contig_1 cds 609726 610334 + GCA012955505_00730 ycnI YcnI-like domain-containing protein COG:COG4549, COG:S, RefSeq:WP_049426536.1, SO:0001217, UniParc:UPI00066D3835, UniRef:UniRef100_UPI00066D3835, UniRef:UniRef50_A0A640MXN6, UniRef:UniRef90_A0A640MXN6 contig_1 cds 610544 611002 + GCA012955505_00731 DUF2871 domain-containing protein SO:0001217, UniRef:UniRef50_Q2FVP6, UniRef:UniRef90_A0A2K0A5Y5 contig_1 cds 611086 612117 + GCA012955505_00732 trxB Ferredoxin--NADP reductase COG:COG0492, COG:O, EC:1.18.1.2, GO:0004324, GO:0050660, GO:0050661, KEGG:K21567, RefSeq:WP_011275006.1, SO:0001217, UniParc:UPI000054B83B, UniRef:UniRef100_Q4L8N5, UniRef:UniRef50_Q2FVP8, UniRef:UniRef90_Q4L8N5 contig_1 cds 612143 612544 + GCA012955505_00733 rimI N-acetyltransferase COG:COG0456, COG:J, RefSeq:WP_011275007.1, SO:0001217, UniParc:UPI000054B83C, UniRef:UniRef100_A0A2A1KDN5, UniRef:UniRef50_A0A0X7A1U1, UniRef:UniRef90_A0A2A1KDN5 contig_1 cds 612651 613646 - GCA012955505_00734 qor Acryloyl-CoA reductase COG:COG0604, COG:CR, RefSeq:WP_011275008.1, SO:0001217, UniParc:UPI000054B83D, UniRef:UniRef100_A0A640MYL5, UniRef:UniRef50_A0A2Y1TSU4, UniRef:UniRef90_A0A5B2Z086 contig_1 cds 614091 614222 + GCA012955505_00735 hypothetical protein contig_1 cds 614194 614355 + GCA012955505_00736 hypothetical protein contig_1 cds 614624 615793 + GCA012955505_00737 efeB iron uptake transporter deferrochelatase/peroxidase subunit COG:COG2837, COG:P, EC:1.11.1.-, EC:4.98.1.1, GO:0004601, GO:0020037, GO:0033212, KEGG:K16301, SO:0001217, UniRef:UniRef50_A0A390V9S3, UniRef:UniRef90_A0A5B2YYE5 contig_1 cds 615774 617519 + GCA012955505_00738 fTR1 FTR1 family iron permease COG:COG0672, COG:P, KEGG:K07243, RefSeq:WP_016930742.1, SO:0001217, UniParc:UPI0002D40A31, UniRef:UniRef100_A0A2A1KGP5, UniRef:UniRef50_A0A4Z1BRH1, UniRef:UniRef90_A0A2A1KGP5 contig_1 cds 617438 618187 - GCA012955505_00739 tatC twin-arginine translocase subunit TatC COG:COG0805, COG:U, GO:0005886, GO:0015628, KEGG:K03118, SO:0001217, UniRef:UniRef50_A0A2S6D619, UniRef:UniRef90_A0A640MZY0 contig_1 cds 618129 618341 - GCA012955505_00740 tatA Sec-independent protein translocase protein TatA COG:COG1826, COG:U, SO:0001217, UniParc:UPI000054B842, UniRef:UniRef100_A0A640MYN4, UniRef:UniRef50_A0A380FX86, UniRef:UniRef90_A0A2A1KEH8 contig_1 cds 618523 619041 + GCA012955505_00741 rimI N-acetyltransferase COG:COG0456, COG:J, SO:0001217, UniRef:UniRef50_A0A4U9T6M5, UniRef:UniRef90_A0A2A1KBA7 contig_1 cds 619227 619808 - GCA012955505_00742 CDP-glycerol glycerophosphotransferase family protein SO:0001217, UniRef:UniRef50_UPI0023B172DE contig_1 cds 619868 620554 - GCA012955505_00743 hypothetical protein contig_1 cds 620681 622282 + GCA012955505_00744 lldP L-lactate permease COG:C, COG:COG1620, KEGG:K03303, RefSeq:WP_011275016.1, SO:0001217, UniParc:UPI000054B845, UniRef:UniRef100_A0A640MYP4, UniRef:UniRef50_Q9K5Z9, UniRef:UniRef90_A0A380FWM7 contig_1 cds 622412 623563 - GCA012955505_00745 rfaB Glycoside hydrolase COG:COG0438, COG:M, RefSeq:WP_011275017.1, SO:0001217, UniParc:UPI000054B846, UniRef:UniRef100_A0A640MYR1, UniRef:UniRef50_A0A0H2VJ62, UniRef:UniRef90_A0A640MYR1 contig_1 cds 623854 624822 + GCA012955505_00746 malate dehydrogenase (quinone) SO:0001217, UniRef:UniRef50_A0A8J6PH70 contig_1 cds 624779 625327 + GCA012955505_00747 malate dehydrogenase (quinone) SO:0001217, UniRef:UniRef50_A0A7Y4Q9N2 contig_1 cds 625411 625836 - GCA012955505_00748 DUF3021 domain-containing protein SO:0001217, UniRef:UniRef50_A0A2A1KB78, UniRef:UniRef90_A0A2A1KB78 contig_1 cds 625925 626302 - GCA012955505_00749 lytTR Response regulator transcription factor COG:COG3289, COG:K, SO:0001217, UniRef:UniRef50_Q2FVQ7, UniRef:UniRef90_A0A640MYL3 contig_1 cds 626426 627796 - GCA012955505_00750 hssS Heme sensor protein HssS COG:COG0642, COG:T, EC:2.7.13.3, GO:0000155, GO:0005524, GO:0005886, RefSeq:WP_011275021.1, SO:0001217, UniParc:UPI000054B84A, UniRef:UniRef100_Q4L8M0, UniRef:UniRef50_Q2FVQ8, UniRef:UniRef90_Q4L8M0 contig_1 cds 627789 628463 - GCA012955505_00751 hssR Heme response regulator HssR COG:COG0745, COG:TK, GO:0000156, GO:0000976, GO:0005829, GO:0006355, GO:0032993, RefSeq:WP_011275022.1, SO:0001217, UniParc:UPI000054B84B, UniRef:UniRef100_Q4L8L9, UniRef:UniRef50_Q2FVQ9, UniRef:UniRef90_Q4L8L9 contig_1 cds 628599 629654 + GCA012955505_00752 hrtB Putative hemin transport system permease protein HrtB COG:COG4591, COG:M, GO:0005886, KEGG:K09813, RefSeq:WP_011275023.1, SO:0001217, UniParc:UPI000054B84C, UniRef:UniRef100_Q4L8L8, UniRef:UniRef50_Q4L8L8, UniRef:UniRef90_Q4L8L8 contig_1 cds 629654 630319 + GCA012955505_00753 hrtA Putative hemin import ATP-binding protein HrtA COG:COG1136, COG:M, EC:7.6.2.-, GO:0005524, GO:0005886, GO:0016887, GO:0022857, RefSeq:WP_011275024.1, SO:0001217, UniParc:UPI000054B84D, UniRef:UniRef100_Q4L8L7, UniRef:UniRef50_Q99RR8, UniRef:UniRef90_Q4L8L7 contig_1 cds 630441 631145 - GCA012955505_00754 elyC DUF218 domain-containing protein COG:COG1434, COG:M, RefSeq:WP_257874783.1, SO:0001217, UniParc:UPI002150BCC8, UniRef:UniRef100_A0A2A1KCP3, UniRef:UniRef50_Q4L8L6, UniRef:UniRef90_Q4L8L6 contig_1 cds 631147 631344 - GCA012955505_00755 hypothetical protein contig_1 cds 631509 632012 + GCA012955505_00756 marR MarR family transcriptional regulator COG:COG1846, COG:K, KEGG:K21454, SO:0001217, UniRef:UniRef50_Q9F4G3, UniRef:UniRef90_A0A640N029 contig_1 cds 632218 633201 + GCA012955505_00757 tcaA TcaA protein SO:0001217, UniRef:UniRef50_A0A380FKZ4 contig_1 cds 633609 634817 + GCA012955505_00758 araJ Bcr/CflA family efflux transporter COG:COG2814, COG:G, KEGG:K07552, RefSeq:WP_016931137.1, SO:0001217, UniParc:UPI0002D82659, UniRef:UniRef100_A0A2A1KGN2, UniRef:UniRef50_Q9F4G1, UniRef:UniRef90_A0A2A1KGN2 contig_1 cds 634931 635137 - GCA012955505_00759 TetR-like C-terminal domain-containing protein SO:0001217, UniRef:UniRef50_A0A380DXK0, UniRef:UniRef90_UPI000FF3F7A8 contig_1 cds 635352 635999 + GCA012955505_00760 emrA HlyD family secretion protein COG:COG1566, COG:V, RefSeq:WP_145463279.1, SO:0001217, UniParc:UPI0011A31339, UniRef:UniRef100_UPI0011A31339, UniRef:UniRef50_Q2G2W5, UniRef:UniRef90_A0A2A1KD33 contig_1 cds 636012 638066 + GCA012955505_00761 araJ Quinolone resistance protein NorB COG:COG2814, COG:G, KEGG:K03446, RefSeq:WP_011275031.1, SO:0001217, UniParc:UPI000054B854, UniRef:UniRef100_A0A640N2U3, UniRef:UniRef50_Q9F0Z1, UniRef:UniRef90_A0A2K0A612 contig_1 cds 638191 638838 - GCA012955505_00762 ABC transporter permease RefSeq:WP_011275032.1, SO:0001217, UniParc:UPI000054B855, UniRef:UniRef100_A0A640MZ84, UniRef:UniRef50_A0A5B2YYG9, UniRef:UniRef90_A0A2K0A616 contig_1 cds 639034 639933 + GCA012955505_00763 aes Alpha/beta hydrolase COG:COG0657, COG:I, RefSeq:WP_011275033.1, SO:0001217, UniParc:UPI000054B856, UniRef:UniRef100_A0A640MYW9, UniRef:UniRef50_Q2G2W3, UniRef:UniRef90_A0A2K0A618 contig_1 cds 640119 640475 - GCA012955505_00764 hypothetical protein SO:0001217, UniRef:UniRef50_A0A2K0A626, UniRef:UniRef90_A0A2K0A626 contig_1 cds 640478 640951 - GCA012955505_00765 fadM 3-hydroxyacyl-CoA dehydrogenase COG:COG0824, COG:I, SO:0001217, UniRef:UniRef50_Q2FVR7, UniRef:UniRef90_A0A2K0A623 contig_1 cds 641072 642019 + GCA012955505_00766 corA magnesium/cobalt transporter CorA COG:COG0598, COG:P, GO:0006824, GO:0015087, GO:0015095, GO:0015693, GO:0016020, RefSeq:WP_011275036.1, SO:0001217, UniParc:UPI000054B859, UniRef:UniRef100_A0A640N2W1, UniRef:UniRef50_A0A2I7YA74, UniRef:UniRef90_A0A640N2W1 contig_1 cds 642064 643113 + GCA012955505_00767 fni type 2 isopentenyl-diphosphate Delta-isomerase COG:CIR, COG:COG1304, EC:5.3.3.2, GO:0000287, GO:0004452, GO:0005737, GO:0008299, GO:0010181, GO:0016491, GO:0070402, RefSeq:WP_016931136.1, SO:0001217, UniParc:UPI0002D47609, UniRef:UniRef100_A0A2A1KDS1, UniRef:UniRef50_Q2FVR9, UniRef:UniRef90_Q4L8K4 contig_1 cds 643222 644433 - GCA012955505_00768 gltS sodium/glutamate symporter COG:COG0786, COG:E, GO:0015501, GO:0015813, GO:0016020, KEGG:K03312, RefSeq:WP_011275038.1, SO:0001217, UniParc:UPI000054B85B, UniRef:UniRef100_A0A7Z1S8H7, UniRef:UniRef50_A0A380G4D5, UniRef:UniRef90_A0A7Z1S8H7 contig_1 cds 644679 645287 - GCA012955505_00769 mpg Putative 3-methyladenine DNA glycosylase COG:COG2094, COG:L, EC:3.2.2.-, GO:0003677, GO:0003905, GO:0006284, KEGG:K03652, RefSeq:WP_011275039.1, SO:0001217, UniParc:UPI000054B85C, UniRef:UniRef100_Q4L8K2, UniRef:UniRef50_B9DLR4, UniRef:UniRef90_Q4L8K2 contig_1 cds 645501 645698 + GCA012955505_00770 xRE Transcriptional regulator COG:COG1476, COG:K, RefSeq:WP_011275040.1, SO:0001217, UniParc:UPI000054B85D, UniRef:UniRef100_A0A640MYU2, UniRef:UniRef50_K0JNC8, UniRef:UniRef90_A0A640MYU2 contig_1 cds 645691 646440 + GCA012955505_00771 DUF3169 domain-containing protein RefSeq:WP_011275041.1, SO:0001217, UniParc:UPI000054B85E, UniRef:UniRef100_A0A2A1KGT4, UniRef:UniRef50_A0A2A1KGT4, UniRef:UniRef90_A0A2A1KGT4 contig_1 cds 646643 646969 + GCA012955505_00772 ynfA YnfA family protein COG:COG1742, COG:R, GO:0005886, GO:0016020, KEGG:K09771, RefSeq:WP_011275042.1, SO:0001217, UniParc:UPI000054B85F, UniRef:UniRef100_Q4L8J9, UniRef:UniRef50_Q4L8J9, UniRef:UniRef90_Q4L8J9 contig_1 cds 647000 647917 + GCA012955505_00773 galM Aldose 1-epimerase COG:COG2017, COG:G, SO:0001217, UniRef:UniRef50_A0A0D6XRD3, UniRef:UniRef90_A0A2A1KEL5 contig_1 cds 648070 648723 - GCA012955505_00774 yiiM MOSC domain-containing protein COG:COG2258, COG:FV, RefSeq:WP_011275044.1, SO:0001217, UniParc:UPI000054B861, UniRef:UniRef100_A0A2A1KBE1, UniRef:UniRef50_Q5HLQ8, UniRef:UniRef90_A0A2A1KBE1 contig_1 cds 648885 649409 + GCA012955505_00775 Ribose 5-phosphate isomerase A SO:0001217, UniRef:UniRef50_A0A3A0UPJ3 contig_1 cds 649646 650737 - GCA012955505_00776 lyrA Lysostaphin resistance protein A COG:COG1266, COG:O, GO:0004222, GO:0005886, GO:0071586, RefSeq:WP_016931133.1, SO:0001217, UniParc:UPI00031E7607, UniRef:UniRef100_A0A2A1KDH7, UniRef:UniRef50_Q5HLR3, UniRef:UniRef90_Q4L8J4 contig_1 cds 650842 651780 + GCA012955505_00777 hutG formimidoylglutamase COG:COG0010, COG:E, EC:3.5.3.8, GO:0008783, GO:0019556, GO:0019557, GO:0030145, GO:0033389, GO:0050415, KEGG:K01479, SO:0001217, UniRef:UniRef50_Q2FVT2, UniRef:UniRef90_Q4L8J3 contig_1 cds 651970 652737 + GCA012955505_00778 SLC26A/SulP transporter domain-containing protein RefSeq:WP_011275048.1, SO:0001217, UniParc:UPI000054B865, UniRef:UniRef100_A0A640MYI5, UniRef:UniRef50_A0A640MYI5, UniRef:UniRef90_A0A640MYI5 contig_1 cds 652765 653151 + GCA012955505_00779 SLC26A/SulP transporter domain-containing protein RefSeq:WP_016931131.1, SO:0001217, UniParc:UPI0002FC1EDD, UniRef:UniRef100_UPI0002FC1EDD, UniRef:UniRef50_A0A640N476, UniRef:UniRef90_A0A640N476 contig_1 cds 653148 654194 + GCA012955505_00780 abgB Peptidase M20 dimerisation domain-containing protein COG:COG1473, COG:R, SO:0001217, UniRef:UniRef50_Q4L8J0, UniRef:UniRef90_Q4L8J0 contig_1 cds 654336 655217 + GCA012955505_00781 fabG Oxidoreductase COG:COG1028, COG:I, RefSeq:WP_016931129.1, SO:0001217, UniParc:UPI00030E84DE, UniRef:UniRef100_A0A2A1KBA8, UniRef:UniRef50_D5DPI1, UniRef:UniRef90_A0A380FYG0 contig_1 cds 655295 655906 + GCA012955505_00782 rutF Flavin reductase like domain-containing protein COG:C, COG:COG1853, RefSeq:WP_016931128.1, SO:0001217, UniParc:UPI0002DC39C2, UniRef:UniRef100_A0A640MYK5, UniRef:UniRef50_F4BMC7, UniRef:UniRef90_A0A640MZF8 contig_1 cds 656026 657321 + GCA012955505_00783 nhaC Sodium:proton antiporter COG:C, COG:COG1757, RefSeq:WP_016931127.1, SO:0001217, UniParc:UPI0002DEEDF0, UniRef:UniRef100_UPI0002DEEDF0, UniRef:UniRef50_C7XRA2, UniRef:UniRef90_A0A2K0A636 contig_1 cds 657404 657922 + GCA012955505_00784 yndB Activator of Hsp90 ATPase-like ue 1/2-like C-terminal domain-containing protein COG:COG3832, COG:I, RefSeq:WP_011275054.1, SO:0001217, UniParc:UPI000054B86B, UniRef:UniRef100_A0A640MZH3, UniRef:UniRef50_B9DLU2, UniRef:UniRef90_A0A2K4DT51 contig_1 cds 658113 658874 - GCA012955505_00785 rpiR MurR/RpiR family transcriptional regulator COG:COG1737, COG:K, KEGG:K03481, RefSeq:WP_011275055.1, SO:0001217, UniParc:UPI000054B86C, UniRef:UniRef100_A0A640MZ54, UniRef:UniRef50_A0A0D1GF60, UniRef:UniRef90_A0A2K0A634 contig_1 cds 659065 660579 + GCA012955505_00786 ptsG2 PTS alpha-glucoside transporter subunit IIBC COG:COG1264, COG:G, EC:2.7.1.-, EC:2.7.1.208, KEGG:K02750, SO:0001217, UniRef:UniRef50_P54715, UniRef:UniRef90_A0A1J3ZX46 contig_1 cds 660808 661338 - GCA012955505_00787 Homing endonuclease LAGLIDADG domain-containing protein RefSeq:WP_011275057.1, SO:0001217, UniParc:UPI000054B86E, UniRef:UniRef100_A0A640MZ57, UniRef:UniRef50_A0A974KZR7, UniRef:UniRef90_A0A380FWR8 contig_1 cds 661650 662294 + GCA012955505_00788 ycjU HAD family hydrolase COG:COG0637, COG:G, RefSeq:WP_011275058.1, SO:0001217, UniParc:UPI000054B86F, UniRef:UniRef100_A0A640MZ64, UniRef:UniRef50_Q2FVU7, UniRef:UniRef90_A0A5B2Z3A3 contig_1 cds 662299 662490 + GCA012955505_00789 Group-Specific protein RefSeq:WP_011275059.1, SO:0001217, UniParc:UPI000054B870, UniRef:UniRef100_A0A640N0F2, UniRef:UniRef50_A0A1E5TKE9, UniRef:UniRef90_A0A640N0F2 contig_1 cds 662595 662786 - GCA012955505_00790 Mid2-like cell wall stress sensor domain protein RefSeq:WP_049394732.1, SO:0001217, UniParc:UPI00066AC34B, UniRef:UniRef100_A0A2A1KDU1, UniRef:UniRef50_Q2FVU9, UniRef:UniRef90_A0A2A1KDU1 contig_1 cds 662786 663136 - GCA012955505_00791 Group-Specific protein RefSeq:WP_049394733.1, SO:0001217, UniParc:UPI00066BAE2E, UniRef:UniRef100_A0A2A1KGR8, UniRef:UniRef50_A0A640MZ73, UniRef:UniRef90_A0A640MZ73 contig_1 cds 663478 664866 + GCA012955505_00792 ansP Amino acid permease/ SLC12A domain-containing protein COG:COG1113, COG:E, RefSeq:WP_016931124.1, SO:0001217, UniParc:UPI00030F3137, UniRef:UniRef100_A0A2A1KBB9, UniRef:UniRef50_P27837, UniRef:UniRef90_Q4L8H7 contig_1 cds 665078 665950 - GCA012955505_00793 rpiR MurR/RpiR family transcriptional regulator COG:COG1737, COG:K, RefSeq:WP_049394734.1, SO:0001217, UniParc:UPI00066A99AA, UniRef:UniRef100_A0A2A1KD65, UniRef:UniRef50_Q2FVV2, UniRef:UniRef90_A0A2A1KD65 contig_1 cds 665951 667384 - GCA012955505_00794 ptsG2 PTS system MurNAc-GlcNAc-specific EIIBC component COG:COG1264, COG:G, GO:0005886, GO:0008982, GO:0009254, GO:0009401, GO:0016301, GO:0090588, RefSeq:WP_011275065.1, SO:0001217, UniParc:UPI000054B876, UniRef:UniRef100_Q4L8H5, UniRef:UniRef50_Q4L8H5, UniRef:UniRef90_Q4L8H5 contig_1 cds 667397 668284 - GCA012955505_00795 murQ N-acetylmuramic acid 6-phosphate etherase COG:COG2103, COG:M, EC:4.2.1.126, GO:0009254, GO:0016803, GO:0016835, GO:0046348, GO:0097173, GO:0097367, KEGG:K07106, RefSeq:WP_011275066.1, SO:0001217, UniParc:UPI000054B877, UniRef:UniRef100_Q4L8H4, UniRef:UniRef50_Q5NEW3, UniRef:UniRef90_Q4L8H4 contig_1 cds 668284 669336 - GCA012955505_00796 mupG Outer surface protein COG:COG3589, COG:M, KEGG:K09963, RefSeq:WP_037558636.1, SO:0001217, UniParc:UPI000450E9FE, UniRef:UniRef100_A0A2A1KEN7, UniRef:UniRef50_Q5HLT4, UniRef:UniRef90_A0A640MYP9 contig_1 cds 669939 670217 - GCA012955505_00797 hypothetical protein PFAM:PF08220.18, PFAM:PF08279.18 contig_1 ncRNA 670333 670482 + GCA012955505_00798 RsaOG RNA S.aureus Orsay G RFAM:RF01775, SO:0000655 contig_1 cds 670563 670727 + GCA012955505_00799 hypothetical protein contig_1 cds 670778 671260 + GCA012955505_00800 suhB (pseudo) Inositol monophosphatase COG:COG0483, COG:G, SO:0001217, UniRef:UniRef50_Q2FVV7, UniRef:UniRef90_A0A2A1KDJ8 contig_1 cds 671630 671746 + GCA012955505_00801 hypothetical protein contig_1 cds 671718 671915 + GCA012955505_00802 hypothetical protein contig_1 cds 672170 675124 + GCA012955505_00803 fdhF formate dehydrogenase subunit alpha COG:C, COG:COG3383, EC:1.17.1.9, GO:0003954, GO:0008863, GO:0009326, GO:0015942, GO:0016020, GO:0022904, GO:0043546, GO:0046872, GO:0051537, GO:0051539, RefSeq:WP_049426449.1, SO:0001217, UniParc:UPI00066CAE83, UniRef:UniRef100_UPI00066CAE83, UniRef:UniRef50_Q49ZN0, UniRef:UniRef90_Q4L8G8 contig_1 cds 675124 675597 + GCA012955505_00804 forE DUF1641 domain-containing protein COG:C, COG:COG2427, RefSeq:WP_037535920.1, SO:0001217, UniParc:UPI0004517B16, UniRef:UniRef100_A0A2A1KBC8, UniRef:UniRef50_Q2FVW0, UniRef:UniRef90_A0A2A1KBC8 contig_1 cds 676083 676862 + GCA012955505_00805 lytD Autolysin COG:COG4193, COG:G, RefSeq:WP_049394737.1, SO:0001217, UniParc:UPI00066EB91B, UniRef:UniRef100_UPI00066EB91B, UniRef:UniRef50_A0A0D6XQN6, UniRef:UniRef90_A0A2A1KD76 contig_1 cds 676958 678082 + GCA012955505_00806 ubiH FAD-binding domain-containing protein COG:COG0654, COG:HC, RefSeq:WP_049394738.1, SO:0001217, UniParc:UPI00066D8817, UniRef:UniRef100_UPI00066D8817, UniRef:UniRef50_A0A380C5V0, UniRef:UniRef90_A0A2K0A661 contig_1 cds 678177 679133 - GCA012955505_00807 ldhA Putative 2-hydroxyacid dehydrogenase SH0752 COG:CHR, COG:COG1052, EC:1.1.1.-, GO:0016616, GO:0051287, RefSeq:WP_145463280.1, SO:0001217, UniParc:UPI0011A9809D, UniRef:UniRef100_UPI0011A9809D, UniRef:UniRef50_Q5HLU4, UniRef:UniRef90_Q4L8G4 contig_1 cds 679215 679526 - GCA012955505_00808 emrE QacE family quaternary ammonium compound efflux SMR transporter COG:COG2076, COG:V, KEGG:K18925, RefSeq:WP_011275077.1, SO:0001217, UniParc:UPI000054B882, UniRef:UniRef100_A0A640N4I7, UniRef:UniRef50_A0A240ADW4, UniRef:UniRef90_A0A2A1KEQ0 contig_1 cds 679528 679857 - GCA012955505_00809 emrE QacE family quaternary ammonium compound efflux SMR transporter COG:COG2076, COG:V, RefSeq:WP_011275078.1, SO:0001217, UniParc:UPI000054B883, UniRef:UniRef100_A0A640MZD0, UniRef:UniRef50_B9DLW7, UniRef:UniRef90_A0A2K0A656 contig_1 cds 680124 680771 - GCA012955505_00810 CHAP domain-containing protein COG:COG3942, COG:M, RefSeq:WP_049394740.1, SO:0001217, UniParc:UPI00066BAE8E, UniRef:UniRef100_UPI00066BAE8E, UniRef:UniRef50_A0A4U9TDU2, UniRef:UniRef90_A0A2A1KCW0 contig_1 cds 681089 681517 - GCA012955505_00811 tic20a DUF4870 domain-containing protein COG:COG3296, COG:R, KEGG:K09940, RefSeq:WP_136719830.1, SO:0001217, UniParc:UPI0010ABE251, UniRef:UniRef100_UPI0010ABE251, UniRef:UniRef50_A0A5B2Z2V5, UniRef:UniRef90_A0A5B2Z2V5 contig_1 cds 681886 682956 + GCA012955505_00812 gpsA 6-phosphogluconate dehydrogenase, decarboxylating COG:C, COG:COG0240, EC:1.5.1.28, KEGG:K04940, RefSeq:WP_011275081.1, SO:0001217, UniParc:UPI000054B886, UniRef:UniRef100_A0A640MYH0, UniRef:UniRef50_A0A7Z7QNB8, UniRef:UniRef90_A0A2T4KGI8 contig_1 cds 683069 684475 + GCA012955505_00813 nhaC Na+/H+ antiporter NhaC COG:C, COG:COG1757, GO:0006814, GO:0015297, GO:0015385, GO:0016020, GO:1902600, KEGG:K03315, RefSeq:WP_011275082.1, SO:0001217, UniParc:UPI000054B887, UniRef:UniRef100_A0A640MYL8, UniRef:UniRef50_A0A291JHU7, UniRef:UniRef90_A0A2K0A662 contig_1 cds 684796 685338 - GCA012955505_00814 transposase KEGG:K07485, SO:0001217, UniRef:UniRef50_Q4L3M1, UniRef:UniRef90_UPI001CA4AD82 contig_1 cds 685797 686585 - GCA012955505_00815 CHAP domain-containing protein COG:COG3942, COG:M, SO:0001217, UniRef:UniRef50_Q2G2J2, UniRef:UniRef90_A0A2S6DU43 contig_1 cds 686871 687524 + GCA012955505_00816 helix-turn-helix transcriptional regulator SO:0001217, UniRef:UniRef50_A0A2A1KD86, UniRef:UniRef90_UPI00214D48E2 contig_1 cds 687867 688598 + GCA012955505_00817 Transcriptional regulator SarA/SarZ/Rot-like helix-turn-helix domain-containing protein RefSeq:WP_227489788.1, SO:0001217, UniParc:UPI0002F24258, UniRef:UniRef100_A0A2A1KGY5, UniRef:UniRef50_A0A4Z1B894, UniRef:UniRef90_A0A2A1KGY5 contig_1 cds 688633 688956 + GCA012955505_00818 YokE-like PH domain-containing protein RefSeq:WP_011275088.1, SO:0001217, UniParc:UPI000054B88D, UniRef:UniRef100_A0A2A1KF98, UniRef:UniRef50_Q2G270, UniRef:UniRef90_A0A2A1KF98 contig_1 cds 689443 689787 + GCA012955505_00819 marR MarR family transcriptional regulator COG:COG1846, COG:K, RefSeq:WP_011275089.1, SO:0001217, UniParc:UPI000054B88E, UniRef:UniRef100_A0A2A1KER2, UniRef:UniRef50_A0A654BPX8, UniRef:UniRef90_A0A2A1KER2 contig_1 cds 689945 691090 + GCA012955505_00820 caiA Acyl-CoA dehydrogenase COG:COG1960, COG:I, SO:0001217, UniParc:UPI0002D39320, UniRef:UniRef100_A0A7Z1N6N5, UniRef:UniRef50_A0A380FY69, UniRef:UniRef90_A0A7Z1N6N5 contig_1 cds 691675 692145 + GCA012955505_00821 hypothetical protein PFAM:PF01497.23, SO:0001217, UniRef:UniRef50_A0A239TR82 contig_1 cds 692253 693200 + GCA012955505_00822 uRH1 Purine nucleosidase COG:COG1957, COG:F, RefSeq:WP_011275092.1, SO:0001217, UniParc:UPI000054B891, UniRef:UniRef100_A0A2A1KDL9, UniRef:UniRef50_A0A0D1JCP0, UniRef:UniRef90_A0A2A1KDL9 contig_1 cds 693269 693817 + GCA012955505_00823 bioY Biotin transporter COG:COG1268, COG:H, KEGG:K03523, RefSeq:WP_011275093.1, SO:0001217, UniParc:UPI000054B892, UniRef:UniRef100_A0A2A1KDW9, UniRef:UniRef50_A0A0E7RMI7, UniRef:UniRef90_A0A2A1KDW9 contig_1 cds 693852 694616 + GCA012955505_00824 N-acetyltransferase RefSeq:WP_011275094.1, SO:0001217, UniParc:UPI000054B893, UniRef:UniRef100_A0A2A1KGW1, UniRef:UniRef50_Q2FVX2, UniRef:UniRef90_A0A2A1KGW1 contig_1 cds 694652 695446 - GCA012955505_00825 fdhD formate dehydrogenase accessory sulfurtransferase FdhD COG:C, COG:COG1526, GO:0005737, GO:0006777, GO:0009061, GO:0009326, GO:0015942, GO:0016783, GO:0097163, KEGG:K02379, RefSeq:WP_011275095.1, SO:0001217, UniParc:UPI000054B894, UniRef:UniRef100_Q4L8E4, UniRef:UniRef50_A8FIA1, UniRef:UniRef90_Q4L8E4 contig_1 cds 695643 696398 + GCA012955505_00826 modA molybdate ABC transporter substrate-binding protein COG:COG0725, COG:P, GO:0015412, GO:0015689, GO:0030288, GO:0030973, GO:0055052, SO:0001217, UniRef:UniRef50_Q4L8E3, UniRef:UniRef90_Q4L8E3 contig_1 cds 696411 697082 + GCA012955505_00827 modB molybdate ABC transporter permease subunit COG:COG4149, COG:P, GO:0005886, GO:0015412, GO:0015689, GO:0055052, RefSeq:WP_011275097.1, SO:0001217, UniParc:UPI000054B896, UniRef:UniRef100_A0A2A1KGZ7, UniRef:UniRef50_A0AAJ4SFQ7, UniRef:UniRef90_A0A2A1KGZ7 contig_1 cds 697083 697688 + GCA012955505_00828 modC Molybdenum ABC transporter ATP-binding protein COG:COG4148, COG:P, RefSeq:WP_011275098.1, SO:0001217, UniParc:UPI000054B897, UniRef:UniRef100_A0A2A1KFA7, UniRef:UniRef50_A0A380G6T3, UniRef:UniRef90_A0A2A1KFA7 contig_1 cds 697899 698903 + GCA012955505_00829 thiF Molybdopterin biosynthesis protein MoeB COG:COG0476, COG:H, RefSeq:WP_011275099.1, SO:0001217, UniParc:UPI000054B898, UniRef:UniRef100_A0A2A1KES3, UniRef:UniRef50_A0A380C5E9, UniRef:UniRef90_A0A2A1KES3 contig_1 cds 698915 699421 + GCA012955505_00830 moaB Molybdenum cofactor biosynthesis protein B COG:COG0521, COG:H, RefSeq:WP_011275100.1, SO:0001217, UniParc:UPI000054B899, UniRef:UniRef100_A0A2A1KBJ1, UniRef:UniRef50_F9DRM9, UniRef:UniRef90_A0A2A1KBJ1 contig_1 cds 699529 700011 - GCA012955505_00831 moaC cyclic pyranopterin monophosphate synthase MoaC COG:COG0315, COG:H, EC:4.6.1.17, GO:0006777, GO:0061799, KEGG:K03637, RefSeq:WP_011275101.1, SO:0001217, UniParc:UPI000054B89A, UniRef:UniRef100_Q4L8D8, UniRef:UniRef50_Q2FVX9, UniRef:UniRef90_Q4L8D8 contig_1 cds 700074 701333 + GCA012955505_00832 glp gephyrin-like molybdotransferase Glp COG:COG0303, COG:H, GO:0006777, GO:0061599, GO:1990586, RefSeq:WP_011275102.1, SO:0001217, UniParc:UPI000054B89B, UniRef:UniRef100_A0A2A1KDM9, UniRef:UniRef50_Q5HLX6, UniRef:UniRef90_A0A2A1KDM9 contig_1 cds 701330 701800 + GCA012955505_00833 mobB molybdopterin-guanine dinucleotide biosynthesis protein B COG:COG1763, COG:H, GO:0003824, GO:0005525, GO:0006777, RefSeq:WP_011275103.1, SO:0001217, UniParc:UPI000054B89C, UniRef:UniRef100_A0A7Z1N5Z1, UniRef:UniRef50_A0A380H3I1, UniRef:UniRef90_A0A7Z1N5Z1 contig_1 cds 701808 702257 + GCA012955505_00834 moaE Molybdopterin synthase catalytic subunit COG:COG0314, COG:H, RefSeq:WP_145437163.1, SO:0001217, UniParc:UPI0011A4B840, UniRef:UniRef100_UPI0011A4B840, UniRef:UniRef50_Q9K8I7, UniRef:UniRef90_A0A380FYL0 contig_1 cds 702441 703043 + GCA012955505_00835 mobA molybdenum cofactor guanylyltransferase MobA COG:COG0746, COG:H, EC:2.7.7.77, GO:0005525, GO:0005737, GO:0006777, GO:0046872, GO:0061603, SO:0001217, UniRef:UniRef50_Q5HLY0, UniRef:UniRef90_Q4L8D3 contig_1 cds 703057 704079 + GCA012955505_00836 moaA GTP 3',8-cyclase MoaA COG:COG2896, COG:H, EC:4.1.99.22, GO:0005525, GO:0006777, GO:0046872, GO:0051539, GO:0061798, GO:0061799, GO:1904047, RefSeq:WP_011275107.1, SO:0001217, UniParc:UPI000054B8A0, UniRef:UniRef100_Q4L8D2, UniRef:UniRef50_Q49ZI6, UniRef:UniRef90_Q4L8D2 contig_1 cds 704347 704595 + GCA012955505_00837 sarV Transcriptional regulator SarV SO:0001217, UniRef:UniRef50_A0A380EL91 contig_1 cds 704782 705822 - GCA012955505_00838 araJ MFS transporter COG:COG2814, COG:G, SO:0001217, UniRef:UniRef50_Q2FVZ0, UniRef:UniRef90_A0A2A1KET6 contig_1 cds 705928 706365 - GCA012955505_00839 marR MarR family transcriptional regulator COG:COG1846, COG:K, RefSeq:WP_011275110.1, SO:0001217, UniParc:UPI000054B8A3, UniRef:UniRef100_A0A2A1KBJ9, UniRef:UniRef50_A0A3S7GWZ0, UniRef:UniRef90_A0A2A1KBJ9 contig_1 cds 706675 707283 + GCA012955505_00840 Glyoxalase-like domain protein SO:0001217, UniRef:UniRef50_A0A380FJS0 contig_1 cds 707280 707531 - GCA012955505_00841 hypothetical protein RefSeq:WP_076684602.1, SO:0001217, UniParc:UPI0004455871, UniRef:UniRef100_A0A2A1KDP2, UniRef:UniRef50_Q2FVZ3, UniRef:UniRef90_A0A2A1KDP2 contig_1 cds 707695 708471 + GCA012955505_00842 femX (pseudo) Lipid II:glycine glycyltransferase COG:COG2348, COG:M, EC:2.3.2.16, GO:0005737, GO:0008360, GO:0009252, GO:0016755, GO:0071555, KEGG:K11693, SO:0001217, UniRef:UniRef50_Q2FVZ4, UniRef:UniRef90_Q4L8C6 contig_1 cds 708517 708912 + GCA012955505_00843 peptidoglycan bridge formation glycyltransferase FemA/FemB family protein SO:0001217, UniRef:UniRef50_UPI00103E2A57 contig_1 cds 709002 710489 + GCA012955505_00844 RND multidrug efflux transporter Acriflavin resistance protein SO:0001217, UniRef:UniRef50_A0A380DRZ4 contig_1 cds 710449 712170 + GCA012955505_00845 efflux RND transporter permease subunit SO:0001217, UniRef:UniRef50_UPI000AA8E92C, UniRef:UniRef90_UPI000AA8E92C contig_1 cds 712310 712627 - GCA012955505_00846 mspA membrane stabilizing protein MspA RefSeq:WP_011275115.1, SO:0001217, UniParc:UPI000054B8A8, UniRef:UniRef100_A0A2A1KBH1, UniRef:UniRef50_Q2FVZ6, UniRef:UniRef90_A0A2A1KBH1 contig_1 cds 712709 712912 - GCA012955505_00847 SE1832 family protein SO:0001217, UniRef:UniRef50_Q2FVZ7, UniRef:UniRef90_A0A2K0A695 contig_1 cds 712965 713960 + GCA012955505_00848 yfdV AEC family transporter COG:COG0679, COG:R, SO:0001217, UniRef:UniRef50_Q2FVZ8, UniRef:UniRef90_A0A2A1KDC1 contig_1 cds 714030 714821 - GCA012955505_00849 fabG 3-oxoacyl-[acyl-carrier-protein] reductase FabG COG:COG1028, COG:I, SO:0001217, UniRef:UniRef50_P40288, UniRef:UniRef90_A0A2A1KH22 contig_1 cds 714848 715711 - GCA012955505_00850 glcU Glucose transporter COG:COG4975, COG:G, KEGG:K05340, RefSeq:WP_011275119.1, SO:0001217, UniParc:UPI000054B8AC, UniRef:UniRef100_A0A2A1KFD5, UniRef:UniRef50_O07881, UniRef:UniRef90_A0A2A1KFD5 contig_1 cds 715885 716757 - GCA012955505_00851 rimI N-acetyltransferase COG:COG0456, COG:J, RefSeq:WP_011275120.1, SO:0001217, UniParc:UPI000054B8AD, UniRef:UniRef100_A0A2A1KEU7, UniRef:UniRef50_Q2FW01, UniRef:UniRef90_A0A2A1KEU7 contig_1 cds 716906 718960 + GCA012955505_00852 topB DNA topoisomerase 3 COG:COG0551, COG:L, EC:5.6.2.1, GO:0000287, GO:0003677, GO:0003917, GO:0006265, GO:0006281, GO:0006310, GO:0043597, KEGG:K03169, SO:0001217, UniRef:UniRef50_P0C2W6, UniRef:UniRef90_Q4L8B8 contig_1 cds 718957 719058 + GCA012955505_00853 hypothetical protein contig_1 cds 719101 720435 + GCA012955505_00854 nCS2 NCS2 family permease COG:COG2252, COG:F, KEGG:K06901, RefSeq:WP_016931146.1, SO:0001217, UniParc:UPI0002E160E3, UniRef:UniRef100_A0A2A1KD06, UniRef:UniRef50_O34987, UniRef:UniRef90_Q2FW04 contig_1 cds 720479 720874 - GCA012955505_00855 Integral membrane protein RefSeq:WP_011275123.1, SO:0001217, UniParc:UPI000054B8B0, UniRef:UniRef100_A0A2A1KDQ3, UniRef:UniRef50_Q2FW05, UniRef:UniRef90_A0A2A1KDQ3 contig_1 cds 721245 721553 + GCA012955505_00856 rpsJ 30S ribosomal protein S10 COG:COG0051, COG:J, GO:0000049, GO:0003723, GO:0003735, GO:0005840, GO:0006412, GO:1990904, RefSeq:WP_015900978.1, SO:0001217, UniParc:UPI0001915B5C, UniRef:UniRef100_B9DM20, UniRef:UniRef50_P0A7R5, UniRef:UniRef90_B9E9J0 contig_1 cds 721620 722282 + GCA012955505_00857 rplC 50S ribosomal protein L3 COG:COG0087, COG:J, GO:0003735, GO:0005840, GO:0006412, GO:0019843, GO:0022625, KEGG:K02906, RefSeq:WP_011275125.1, SO:0001217, UniParc:UPI000054B8B2, UniRef:UniRef100_Q4L8B4, UniRef:UniRef50_Q2FW06, UniRef:UniRef90_Q2FW06 contig_1 cds 722309 722932 + GCA012955505_00858 rplD 50S ribosomal protein L4 COG:COG0088, COG:J, GO:0003735, GO:0005840, GO:0006412, GO:0019843, GO:0022625, GO:1990904, RefSeq:WP_011275126.1, SO:0001217, UniParc:UPI000054B8B3, UniRef:UniRef100_Q4L8B3, UniRef:UniRef50_P42921, UniRef:UniRef90_Q5HM00 contig_1 cds 722932 723207 + GCA012955505_00859 rplW 50S ribosomal protein L23 COG:COG0089, COG:J, GO:0003735, GO:0005840, GO:0006412, GO:0019843, GO:1990904, RefSeq:WP_011275127.1, SO:0001217, UniParc:UPI000054B8B4, UniRef:UniRef100_Q4L8B2, UniRef:UniRef50_A0QSD3, UniRef:UniRef90_B9DM17 contig_1 cds 723247 724080 + GCA012955505_00860 rplB 50S ribosomal protein L2 COG:COG0090, COG:J, GO:0002181, GO:0003723, GO:0003735, GO:0006412, GO:0015934, GO:0016740, GO:0019843, KEGG:K02886, RefSeq:WP_011275128.1, SO:0001217, UniParc:UPI000054B8B5, UniRef:UniRef100_Q4L8B1, UniRef:UniRef50_Q85FI1, UniRef:UniRef90_Q49ZG5 contig_1 cds 724145 724423 + GCA012955505_00861 rpsS 30S ribosomal protein S19 COG:COG0185, COG:J, GO:0000028, GO:0003735, GO:0005737, GO:0006412, GO:0015935, GO:0019843, RefSeq:WP_001829710.1, SO:0001217, UniParc:UPI00000E4FC9, UniRef:UniRef100_Q5HM03, UniRef:UniRef50_Q49ZG4, UniRef:UniRef90_Q49ZG4 contig_1 cds 724451 724804 + GCA012955505_00862 rplV 50S ribosomal protein L22 COG:COG0091, COG:J, GO:0003735, GO:0006412, GO:0015934, GO:0019843, GO:0022625, KEGG:K02890, RefSeq:WP_001829734.1, SO:0001217, UniParc:UPI00000E4FC8, UniRef:UniRef100_Q5HM04, UniRef:UniRef50_Q2FW11, UniRef:UniRef90_Q2FW11 contig_1 cds 724828 725481 + GCA012955505_00863 rpsC 30S ribosomal protein S3 COG:COG0092, COG:J, GO:0003729, GO:0003735, GO:0006412, GO:0019843, GO:0022627, KEGG:K02982, RefSeq:WP_011275129.1, SO:0001217, UniParc:UPI000054B8B6, UniRef:UniRef100_Q4L8A8, UniRef:UniRef50_P23309, UniRef:UniRef90_Q2FW12 contig_1 cds 725484 725918 + GCA012955505_00864 rplP 50S ribosomal protein L16 COG:COG0197, COG:J, GO:0000049, GO:0003735, GO:0006412, GO:0019843, GO:0022625, RefSeq:WP_002432945.1, SO:0001217, UniParc:UPI000054B8B7, UniRef:UniRef100_Q4L8A7, UniRef:UniRef50_Q2FW13, UniRef:UniRef90_Q2FW13 contig_1 cds 725908 726117 + GCA012955505_00865 rpmC 50S ribosomal protein L29 COG:COG0255, COG:J, GO:0003735, GO:0005840, GO:0006412, GO:0022625, RefSeq:WP_011275130.1, SO:0001217, UniParc:UPI000054B8B8, UniRef:UniRef100_Q4L8A6, UniRef:UniRef50_Q2FW14, UniRef:UniRef90_Q2FW14 contig_1 cds 726144 726407 + GCA012955505_00866 rpsQ 30S ribosomal protein S17 COG:COG0186, COG:J, GO:0003735, GO:0005840, GO:0006412, GO:0019843, GO:0022627, RefSeq:WP_011275131.1, SO:0001217, UniParc:UPI000054B8B9, UniRef:UniRef100_Q4L8A5, UniRef:UniRef50_P12874, UniRef:UniRef90_Q2FW15 contig_1 cds 726439 726807 + GCA012955505_00867 rplN 50S ribosomal protein L14 COG:COG0093, COG:J, GO:0003735, GO:0006412, GO:0015934, GO:0022625, GO:0070180, RefSeq:WP_002466492.1, SO:0001217, UniParc:UPI000054B8BA, UniRef:UniRef100_Q4L8A4, UniRef:UniRef50_B2LMN0, UniRef:UniRef90_Q927L7 contig_1 cds 726843 727160 + GCA012955505_00868 rplX 50S ribosomal protein L24 COG:COG0198, COG:J, GO:0003735, GO:0005840, GO:0006412, GO:0019843, GO:1990904, SO:0001217, UniRef:UniRef50_P0CI78, UniRef:UniRef90_Q49ZF7 contig_1 cds 727186 727725 + GCA012955505_00869 rplE 50S ribosomal protein L5 GO:0003735, GO:0005840, GO:0006412, KEGG:K02931, SO:0001217, UniRef:UniRef50_Q7NEG4, UniRef:UniRef90_A0A2K0A6B6 contig_1 cds 727748 727933 + GCA012955505_00870 rpsZ type Z 30S ribosomal protein S14 COG:COG0199, COG:J, GO:0003735, GO:0005840, GO:0006412, GO:0008270, GO:0015935, GO:0019843, KEGG:K02954, RefSeq:WP_001140799.1, SO:0001217, UniParc:UPI0000048028, UniRef:UniRef100_Q2FW19, UniRef:UniRef50_P12878, UniRef:UniRef90_Q2FW19 contig_1 cds 727965 728363 + GCA012955505_00871 rpsH 30S ribosomal protein S8 COG:COG0096, COG:J, GO:0003735, GO:0005737, GO:0005840, GO:0006412, GO:0019843, GO:1990904, RefSeq:WP_011275134.1, SO:0001217, UniParc:UPI000054B8BD, UniRef:UniRef100_Q4L8A0, UniRef:UniRef50_P12879, UniRef:UniRef90_B9DM33 contig_1 cds 728388 728924 + GCA012955505_00872 rplF 50S ribosomal protein L6 COG:COG0097, COG:J, GO:0002181, GO:0003735, GO:0005840, GO:0006412, GO:0019843, GO:0022625, RefSeq:WP_011275135.1, SO:0001217, UniParc:UPI000054B8BE, UniRef:UniRef100_Q4L899, UniRef:UniRef50_B9DM32, UniRef:UniRef90_Q4L899 contig_1 cds 728956 729318 + GCA012955505_00873 rplR 50S ribosomal protein L18 COG:COG0256, COG:J, GO:0003735, GO:0005840, GO:0006412, GO:0008097, GO:0022625, RefSeq:WP_016931143.1, SO:0001217, UniParc:UPI0002DF732A, UniRef:UniRef100_UPI0002DF732A, UniRef:UniRef50_Q2FW22, UniRef:UniRef90_Q2FW22 contig_1 cds 729339 729839 + GCA012955505_00874 rpsE 30S ribosomal protein S5 COG:COG0098, COG:J, GO:0003735, GO:0005737, GO:0006412, GO:0015935, GO:0019843, KEGG:K02988, RefSeq:WP_011275137.1, SO:0001217, UniParc:UPI000054B8C0, UniRef:UniRef100_Q4L897, UniRef:UniRef50_P21467, UniRef:UniRef90_B9DM30 contig_1 cds 729856 730035 + GCA012955505_00875 rpmD 50S ribosomal protein L30 COG:COG1841, COG:J, GO:0003735, GO:0006412, GO:0015934, GO:0022625, RefSeq:WP_011275138.1, SO:0001217, UniParc:UPI000054B8C1, UniRef:UniRef100_Q4L896, UniRef:UniRef50_P0A0G2, UniRef:UniRef90_P0A0G2 contig_1 cds 730055 730495 + GCA012955505_00876 rplO 50S ribosomal protein L15 COG:COG0200, COG:J, GO:0003735, GO:0006412, GO:0015934, GO:0019843, GO:0022625, KEGG:K02876, RefSeq:WP_011275139.1, SO:0001217, UniParc:UPI000054B8C2, UniRef:UniRef100_Q4L895, UniRef:UniRef50_Q5M2D2, UniRef:UniRef90_Q4L895 contig_1 cds 730495 731787 + GCA012955505_00877 secY preprotein translocase subunit SecY COG:COG0201, COG:U, GO:0015031, GO:0016020, GO:0043952, RefSeq:WP_011275140.1, SO:0001217, UniParc:UPI000054B8C3, UniRef:UniRef100_A0A2A1KH31, UniRef:UniRef50_O08387, UniRef:UniRef90_A0A380FXL4 contig_1 cds 731806 732456 + GCA012955505_00878 adk adenylate kinase COG:COG0563, COG:F, EC:2.7.4.3, GO:0005524, GO:0006139, GO:0016776, GO:0019205, RefSeq:WP_011275141.1, SO:0001217, UniParc:UPI000054B8C4, UniRef:UniRef100_A0A2A1KBK5, UniRef:UniRef50_B2A4G2, UniRef:UniRef90_A0A2A1KBK5 contig_1 cds 732655 732873 + GCA012955505_00879 infA translation initiation factor IF-1 COG:COG0361, COG:J, GO:0003743, GO:0005829, GO:0006413, GO:0019843, GO:0043022, KEGG:K02518, RefSeq:WP_001829792.1, SO:0001217, UniParc:UPI00000E4FBB, UniRef:UniRef100_Q5HM21, UniRef:UniRef50_P0A3K4, UniRef:UniRef90_Q2FW28 contig_1 cds 732905 733018 + GCA012955505_00880 rpmJ 50S ribosomal protein L36 COG:COG0257, COG:J, GO:0003735, GO:0005737, GO:0005840, GO:0006412, GO:1990904, KEGG:K02919, RefSeq:WP_001829709.1, SO:0001217, UniParc:UPI00000E4FBA, UniRef:UniRef100_Q5HM22, UniRef:UniRef50_P20278, UniRef:UniRef90_Q5HM22 contig_1 cds 733041 733406 + GCA012955505_00881 rpsM 30S ribosomal protein S13 COG:COG0099, COG:J, GO:0000049, GO:0003723, GO:0003735, GO:0005829, GO:0005840, GO:0006412, GO:0015935, GO:0019843, KEGG:K02952, RefSeq:WP_011275142.1, SO:0001217, UniParc:UPI000054B8C5, UniRef:UniRef100_Q4L890, UniRef:UniRef50_P20282, UniRef:UniRef90_Q2FW30 contig_1 cds 733429 733818 + GCA012955505_00882 rpsK 30S ribosomal protein S11 COG:COG0100, COG:J, GO:0003735, GO:0005840, GO:0006412, GO:0019843, GO:1990904, KEGG:K02948, RefSeq:WP_000101625.1, SO:0001217, UniParc:UPI0000048025, UniRef:UniRef100_Q2FW31, UniRef:UniRef50_Q6N4V6, UniRef:UniRef90_B9E9L6 contig_1 cds 733902 734846 + GCA012955505_00883 rpoA DNA-directed RNA polymerase subunit alpha COG:COG0202, COG:K, EC:2.7.7.6, GO:0000428, GO:0001054, GO:0001055, GO:0001056, GO:0001057, GO:0001058, GO:0001066, GO:0003677, GO:0003899, GO:0005737, GO:0006351, GO:0046983, RefSeq:WP_016931142.1, SO:0001217, UniParc:UPI00030E7604, UniRef:UniRef100_UPI00030E7604, UniRef:UniRef50_Q2FW32, UniRef:UniRef90_Q2FW32 contig_1 cds 734868 735239 + GCA012955505_00884 rplQ 50S ribosomal protein L17 COG:COG0203, COG:J, GO:0003735, GO:0005840, GO:0006412, GO:0022625, RefSeq:WP_011275144.1, SO:0001217, UniParc:UPI000054B8C7, UniRef:UniRef100_Q4L887, UniRef:UniRef50_P20277, UniRef:UniRef90_Q2FW33 contig_1 cds 735685 736497 + GCA012955505_00885 ecfA1 energy-coupling factor transporter ATPase COG:COG1122, COG:PR, EC:7.-.-.-, GO:0005524, GO:0006810, GO:0009898, GO:0016887, GO:0042626, GO:0043190, RefSeq:WP_011275145.1, SO:0001217, UniParc:UPI000054B8C8, UniRef:UniRef100_Q4L885, UniRef:UniRef50_Q2YYM4, UniRef:UniRef90_Q4L885 contig_1 cds 736494 737228 + GCA012955505_00886 ecfA2 Energy-coupling factor transporter ATP-binding protein EcfA2 SO:0001217, UniRef:UniRef50_Q2FW35 contig_1 cds 737189 737356 + GCA012955505_00887 hypothetical protein contig_1 cds 737346 738140 + GCA012955505_00888 ecfT Energy-coupling factor transporter transmembrane protein EcfT COG:COG0619, COG:H, KEGG:K16785, SO:0001217, UniRef:UniRef50_D3ERJ1, UniRef:UniRef90_A0A2A1KH43 contig_1 cds 738145 738720 + GCA012955505_00889 truA tRNA pseudouridine(38-40) synthase TruA EC:5.4.99.12, GO:0001522, GO:0003723, GO:0009451, GO:0009982, SO:0001217, UniRef:UniRef50_UPI0015D7870F, UniRef:UniRef90_UPI0015D7870F contig_1 ncRNA-region 738865 738934 + Ribosomal protein L13 leader RFAM:RF00555, SO:0000140 contig_1 cds 739075 739512 + GCA012955505_00890 rplM 50S ribosomal protein L13 COG:COG0102, COG:J, GO:0003729, GO:0003735, GO:0005840, GO:0006412, GO:0017148, GO:0022625, KEGG:K02871, RefSeq:WP_011275149.1, SO:0001217, UniParc:UPI000054B8CC, UniRef:UniRef100_Q4L881, UniRef:UniRef50_Q2FW38, UniRef:UniRef90_Q2FW38 contig_1 cds 739532 739945 + GCA012955505_00891 rpsI 30S ribosomal protein S9 COG:COG0103, COG:J, GO:0003723, GO:0003735, GO:0005840, GO:0006412, GO:0022627, KEGG:K02996, SO:0001217, UniRef:UniRef50_Q2FW39, UniRef:UniRef90_Q2FW39 contig_1 gap 739912 739921 . contig_1 cds 740159 740587 + GCA012955505_00892 family 1 glycosylhydrolase SO:0001217, UniRef:UniRef50_UPI00210AB7FE contig_1 cds 740554 741363 + GCA012955505_00893 family 1 glycosylhydrolase SO:0001217, UniRef:UniRef50_UPI002FDBEC43, UniRef:UniRef90_UPI00195AAD5E contig_1 cds 741609 742193 + GCA012955505_00894 hypothetical protein PFAM:PF06028.17 contig_1 cds 742233 743234 - GCA012955505_00895 ssuD Alkane 1-monooxygenase COG:COG2141, COG:HR, RefSeq:WP_011275163.1, SO:0001217, UniParc:UPI000054B8DB, UniRef:UniRef100_A0A2A1K9N2, UniRef:UniRef50_A0A0D0SMC3, UniRef:UniRef90_A0A2A1K9N2 contig_1 cds 743378 744388 + GCA012955505_00896 qor Zinc-type alcohol dehydrogenase-like protein COG:COG0604, COG:CR, RefSeq:WP_011275164.1, SO:0001217, UniParc:UPI000054B8DC, UniRef:UniRef100_A0A7Z1SF54, UniRef:UniRef50_Q5HM44, UniRef:UniRef90_A0A7Z1SF54 contig_1 cds 744505 746067 + GCA012955505_00897 betT BCCT family transporter COG:COG1292, COG:M, SO:0001217, UniRef:UniRef50_A0A9X4QYP5, UniRef:UniRef90_A0A2A1K693 contig_1 cds 746215 746751 + GCA012955505_00898 amaP alkaline shock response membrane anchor protein AmaP RefSeq:WP_011275166.1, SO:0001217, UniParc:UPI000054B8DE, UniRef:UniRef100_A0A2A1K9R8, UniRef:UniRef50_Q2FW64, UniRef:UniRef90_A0A2K4DKC2 contig_1 cds 746764 747093 + GCA012955505_00899 hypothetical protein contig_1 cds 747162 747467 + GCA012955505_00900 Asp23/Gls24 family envelope stress response protein SO:0001217, UniRef:UniRef50_UPI000A7115FB contig_1 cds 747505 749454 - GCA012955505_00901 iucA IucA/IucC family siderophore biosynthesis protein COG:COG4264, COG:P, EC:6.3.2.58, KEGG:K23446, RefSeq:WP_011275171.1, SO:0001217, UniParc:UPI000054B8E3, UniRef:UniRef100_A0A2A1KA65, UniRef:UniRef50_Q2FW70, UniRef:UniRef90_A0A2A1KA65 contig_1 cds 749569 750738 + GCA012955505_00902 MFS transporter KEGG:K23448, RefSeq:WP_011275172.1, SO:0001217, UniParc:UPI000054B8E4, UniRef:UniRef100_A0A2A1K6R5, UniRef:UniRef50_Q2FW71, UniRef:UniRef90_A0A2A1K6R5 contig_1 cds 750742 751041 + GCA012955505_00903 hypothetical protein contig_1 cds 751125 751310 + GCA012955505_00904 hypothetical protein contig_1 cds 751297 752457 + GCA012955505_00905 iucA (pseudo) Siderophore synthetase COG:COG4264, COG:P, EC:6.3.2.57, KEGG:K23447, SO:0001217, UniRef:UniRef50_Q2FW72, UniRef:UniRef90_A0A2A1K4S4 contig_1 cds 752458 753525 + GCA012955505_00906 yhfX Alanine racemase COG:COG3457, COG:E, EC:5.1.1.12, KEGG:K21898, RefSeq:WP_011275174.1, SO:0001217, UniParc:UPI000054B8E6, UniRef:UniRef100_A0A2A1KA32, UniRef:UniRef50_Q2FW73, UniRef:UniRef90_A0A2A1KA32 contig_1 cds 753766 754266 + GCA012955505_00907 Iron(III) dicitrate-binding protein SO:0001217, UniRef:UniRef50_A0A2X2KBR6 contig_1 cds 754241 754756 + GCA012955505_00908 fecB (pseudo) Heme ABC type transporter HtsABC, heme-binding protein COG:COG4594, COG:P, KEGG:K23181, SO:0001217, UniRef:UniRef50_S2Y8V6, UniRef:UniRef90_A0A380FZ80 contig_1 cds 754769 755800 + GCA012955505_00909 fepD Iron ABC transporter permease COG:COG0609, COG:P, RefSeq:WP_011275176.1, SO:0001217, UniParc:UPI000054B8E8, UniRef:UniRef100_A0A2A1K780, UniRef:UniRef50_A0A380G4K5, UniRef:UniRef90_A0A2A1K780 contig_1 cds 755797 756762 + GCA012955505_00910 fecD Iron-dicitrate transporter subunit FecD COG:COG0609, COG:P, RefSeq:WP_136719888.1, SO:0001217, UniParc:UPI0010AD4BD3, UniRef:UniRef100_UPI0010AD4BD3, UniRef:UniRef50_A0A2K4AJP4, UniRef:UniRef90_A0A2A1K6I5 contig_1 cds 756938 758311 + GCA012955505_00911 spoVV Nucleoside transporter/FeoB GTPase Gate domain-containing protein COG:COG3314, COG:DE, SO:0001217, UniRef:UniRef50_B9DM72, UniRef:UniRef90_A0A2A1K4S8 contig_1 cds 758388 758702 - GCA012955505_00912 isdG heme oxygenase COG:COG2329, COG:H, EC:1.14.99.48, GO:0004392, GO:0005506, GO:0005737, GO:0020037, GO:0033212, GO:0042167, RefSeq:WP_011275179.1, SO:0001217, UniParc:UPI000054B8EB, UniRef:UniRef100_Q4L849, UniRef:UniRef50_Q49ZB8, UniRef:UniRef90_Q4L849 contig_1 cds 758716 758973 - GCA012955505_00913 UPF0457 protein SAOUHSC_02425 SO:0001217, UniRef:UniRef50_Q2FW79, UniRef:UniRef90_A0AB38PEI7 contig_1 cds 759150 759668 + GCA012955505_00914 ybcI Metal-dependent hydrolase COG:COG1988, COG:R, KEGG:K07038, RefSeq:WP_011275181.1, SO:0001217, UniParc:UPI000054B8ED, UniRef:UniRef100_A0A2A1KA57, UniRef:UniRef50_Q2FW80, UniRef:UniRef90_A0A2A1KA57 contig_1 cds 759766 760911 + GCA012955505_00915 qRI1 putative uridylyltransferase SH0870 COG:COG4284, COG:G, EC:2.7.7.-, GO:0070569, KEGG:K11442, SO:0001217, UniRef:UniRef50_Q2FW81, UniRef:UniRef90_Q4L846 contig_1 cds 760928 761611 + GCA012955505_00916 yqfA Hemolysin III COG:COG1272, COG:U, RefSeq:WP_011275183.1, SO:0001217, UniParc:UPI000054B8EF, UniRef:UniRef100_A0A2A1K4R4, UniRef:UniRef50_Q2FW82, UniRef:UniRef90_A0A2A1K4R4 contig_1 cds 761741 762466 + GCA012955505_00917 MFS transporter SO:0001217, UniRef:UniRef50_G5JF22, UniRef:UniRef90_UPI0028625770 contig_1 cds 762502 763017 + GCA012955505_00918 Putative multidrug transporter SO:0001217, UniRef:UniRef50_A0A0H3JSQ4 contig_1 cds 763514 764965 + GCA012955505_00919 araJ MFS transporter COG:COG2814, COG:G, KEGG:K18934, RefSeq:WP_011275186.1, SO:0001217, UniParc:UPI000054B8F2, UniRef:UniRef100_A0A2A1K769, UniRef:UniRef50_Q2FW85, UniRef:UniRef90_A0A2A1K769 contig_1 cds 765023 766105 + GCA012955505_00920 mrp Iron-sulfur cluster carrier protein COG:COG0489, COG:D, SO:0001217, UniRef:UniRef50_A0A1I4PBJ5, UniRef:UniRef90_A0A380FYV8 contig_1 cds 766571 767440 + GCA012955505_00921 cdaA diadenylate cyclase CdaA COG:COG1642, COG:T, EC:2.7.7.85, GO:0004016, GO:0006171, KEGG:K18672, SO:0001217, UniRef:UniRef50_A0A223KXB4, UniRef:UniRef90_A0A2A1M6F3 contig_1 cds 767442 768047 + GCA012955505_00922 YbbR-like domain-containing protein SO:0001217, UniRef:UniRef50_UPI000F88C0CF contig_1 cds 768231 769058 + GCA012955505_00923 Phosphoglucosamine mutase SO:0001217, UniRef:UniRef50_A0A7X9BEN8 contig_1 cds 769016 769579 + GCA012955505_00924 (pseudo) Phosphoglucosamine mutase / FemD, factor involved in methicillin resistance SO:0001217, UniRef:UniRef50_A0A2X2K5Z8, UniRef:UniRef90_A0A2X2K5Z8 contig_1 ncRNA-region 769803 770013 + glmS glucosamine-6-phosphate activated ribozyme aptamer RFAM:RF00234, SO:0005836 contig_1 cds 770188 770832 + GCA012955505_00925 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] SO:0001217, UniRef:UniRef50_A0A2X2K185 contig_1 cds 770928 771662 + GCA012955505_00926 SIS domain-containing protein SO:0001217, UniRef:UniRef50_UPI000D66A465 contig_1 cds 771796 771969 + GCA012955505_00927 (pseudo) Glutamine--fructose-6-phosphate aminotransferase [isomerizing] SO:0001217, UniRef:UniRef50_A0A380DU11, UniRef:UniRef50_UPI003853B54E, UniRef:UniRef90_A0A380DU11 contig_1 cds 772232 773014 + GCA012955505_00928 modF ABC transporter domain-containing protein COG:COG1119, COG:P, RefSeq:WP_011275193.1, SO:0001217, UniParc:UPI000054B8F9, UniRef:UniRef100_Q4L835, UniRef:UniRef50_Q4L835, UniRef:UniRef90_Q4L835 contig_1 cds 773080 773988 + GCA012955505_00929 cof Cof-type HAD-IIB family hydrolase COG:COG0561, COG:HR, EC:3.1.3.104, KEGG:K21064, SO:0001217, UniRef:UniRef50_Q2FWA2, UniRef:UniRef90_A0A7Z1SF36 contig_1 cds 773953 774384 - GCA012955505_00930 hypothetical protein SO:0001217, UniRef:UniRef50_UPI0021750313, UniRef:UniRef90_UPI0021750313 contig_1 cds 774516 775247 + GCA012955505_00931 yfcE Metallophosphatase family protein COG:COG0622, COG:R, RefSeq:WP_011275198.1, SO:0001217, UniParc:UPI000054B8FE, UniRef:UniRef100_A0A2A1K9X6, UniRef:UniRef50_A0AAP8PQK9, UniRef:UniRef90_A0A2A1K9X6 contig_1 cds 775325 776275 - GCA012955505_00932 czrB CDF family zinc efflux transporter CzrB BlastRules:WP_128146008, COG:COG1230, COG:P, RefSeq:WP_011275199.1, SO:0001217, UniParc:UPI000054B8FF, UniRef:UniRef100_A0A2A1K8J4, UniRef:UniRef50_A0A7U7JQM3, UniRef:UniRef90_A0A5B2YX94 contig_1 cds 776268 776597 - GCA012955505_00933 arsR Transcriptional regulator COG:COG0640, COG:K, SO:0001217, UniRef:UniRef50_Q2FWB0, UniRef:UniRef90_A0A7Z1N5B4 contig_1 cds 776741 777397 + GCA012955505_00934 ybjT Oxidoreductase COG:COG0702, COG:R, RefSeq:WP_048667988.1, SO:0001217, UniParc:UPI00065F73DD, UniRef:UniRef100_UPI0034D7A398, UniRef:UniRef50_A0A1W7A9I9, UniRef:UniRef90_A0A2A1K4I2 contig_1 cds 777736 778572 + GCA012955505_00935 Mannose-6-phosphate isomerase SO:0001217, UniRef:UniRef50_A0A0A8HNJ1 contig_1 cds 778679 778858 + GCA012955505_00936 Integral membrane protein SO:0001217, UniRef:UniRef50_Q2FWB4 contig_1 cds 779068 779508 + GCA012955505_00937 hypothetical protein PFAM:PF01878.24 contig_1 cds 779576 780247 + GCA012955505_00938 EVE domain protein SO:0001217, UniRef:UniRef50_A0A380ELS9 contig_1 cds 780442 780837 + GCA012955505_00939 yuxK DUF393 domain-containing protein COG:COG3011, COG:R, RefSeq:WP_053019686.1, SO:0001217, UniParc:UPI00069FDB6D, UniRef:UniRef100_UPI00069FDB6D, UniRef:UniRef50_Q2FWB6, UniRef:UniRef90_Q4L822 contig_1 cds 781029 781469 + GCA012955505_00940 dps DNA starvation/stationary phase protection protein COG:B, COG:COG0783, KEGG:K04047, SO:0001217, UniParc:UPI000054B906, UniRef:UniRef100_A0A2T4SNH5, UniRef:UniRef50_A0A9Q9F1A2, UniRef:UniRef90_A0A2T4SNH5 contig_1 cds 781542 782252 - GCA012955505_00941 deoD purine-nucleoside phosphorylase COG:COG0813, COG:F, EC:2.4.2.1, GO:0004731, GO:0006139, KEGG:K03784, RefSeq:WP_033079614.1, SO:0001217, UniParc:UPI0004A8A976, UniRef:UniRef100_A0A7T8UU81, UniRef:UniRef50_A0A1C5V1M1, UniRef:UniRef90_A0A2K4AEZ2 contig_1 cds 782419 783081 + GCA012955505_00942 deoC deoxyribose-phosphate aldolase COG:COG0274, COG:F, EC:4.1.2.4, GO:0004139, GO:0005737, GO:0006018, GO:0009264, GO:0016052, KEGG:K01619, RefSeq:WP_053019687.1, SO:0001217, UniParc:UPI00069D53F7, UniRef:UniRef100_UPI00069D53F7, UniRef:UniRef50_Q4L819, UniRef:UniRef90_Q4L819 contig_1 cds 783143 784444 + GCA012955505_00943 pdp pyrimidine-nucleoside phosphorylase COG:COG0213, COG:F, EC:2.4.2.2, GO:0004645, GO:0004850, GO:0005829, GO:0006206, GO:0006213, GO:0009032, GO:0016154, GO:0046872, GO:0047847, RefSeq:WP_011275209.1, SO:0001217, UniParc:UPI000054B909, UniRef:UniRef100_Q4L818, UniRef:UniRef50_Q99SC3, UniRef:UniRef90_Q4L818 contig_1 cds 784456 785643 + GCA012955505_00944 deoB phosphopentomutase COG:COG1015, COG:G, EC:5.4.2.7, GO:0000287, GO:0005737, GO:0005829, GO:0006015, GO:0006018, GO:0008973, GO:0009117, GO:0030145, GO:0043094, KEGG:K01839, RefSeq:WP_011275210.1, SO:0001217, UniParc:UPI000054B90A, UniRef:UniRef100_Q4L817, UniRef:UniRef50_Q8DQD0, UniRef:UniRef90_Q4L817 contig_1 cds 785643 785993 + GCA012955505_00945 doxX DoxX family membrane protein COG:COG4270, COG:R, RefSeq:WP_011275211.1, SO:0001217, UniParc:UPI000054B90B, UniRef:UniRef100_A0A2A1KBS7, UniRef:UniRef50_B9DJX6, UniRef:UniRef90_A0A2A1KBS7 contig_1 cds 786064 786534 - GCA012955505_00946 luxS S-ribosylhomocysteine lyase COG:COG1854, COG:T, EC:4.4.1.21, GO:0005506, GO:0009372, GO:0043768, KEGG:K07173, RefSeq:WP_053020170.1, SO:0001217, UniParc:UPI00069FA4DA, UniRef:UniRef100_UPI00069FA4DA, UniRef:UniRef50_Q9ZMW8, UniRef:UniRef90_Q2FWC3 contig_1 cds 786741 787925 + GCA012955505_00947 abgB Peptidase M20 domain-containing protein 2 COG:COG1473, COG:R, SO:0001217, UniRef:UniRef50_Q79EU8, UniRef:UniRef90_A0A2A1K8Z5 contig_1 cds 787922 789100 + GCA012955505_00948 accC ATP-grasp domain-containing protein COG:COG0439, COG:I, EC:6.3.2.-, KEGG:K27344, SO:0001217, UniRef:UniRef50_Q2FWC5, UniRef:UniRef90_Q4L813 contig_1 cds 789296 789982 + GCA012955505_00949 DUF2750 domain-containing protein SO:0001217, UniRef:UniRef50_Q2FWC6, UniRef:UniRef90_A0A2A1K6U5 contig_1 cds 790140 790940 - GCA012955505_00950 coaW type II pantothenate kinase COG:COG5146, COG:H, EC:2.7.1.33, GO:0004594, GO:0005524, GO:0005829, GO:0015937, RefSeq:WP_011275216.1, SO:0001217, UniParc:UPI000054B910, UniRef:UniRef100_Q4L811, UniRef:UniRef50_Q2FWC7, UniRef:UniRef90_Q4L811 contig_1 cds 791131 791991 + GCA012955505_00951 rimL N-acetyltransferase COG:COG1670, COG:JO, RefSeq:WP_011275217.1, SO:0001217, UniParc:UPI000054B911, UniRef:UniRef100_A0A2A1KAH4, UniRef:UniRef50_Q2FWC9, UniRef:UniRef90_A0A2A1KAH4 contig_1 cds 792106 792624 + GCA012955505_00952 rpoE DNA-directed RNA polymerase subunit delta COG:COG3343, COG:K, EC:2.7.7.6, GO:0003899, GO:0006351, GO:0006355, RefSeq:WP_011275218.1, SO:0001217, UniParc:UPI00016100BD, UniRef:UniRef100_A0A2A1KBU0, UniRef:UniRef50_Q2FWD0, UniRef:UniRef90_A0A2A1KBU0 contig_1 ncRNA 792694 792762 + GCA012955505_00953 tsr31 S. aureus tsr31 small RNA RFAM:RF02580, SO:0000655 contig_1 cds 792840 794447 + GCA012955505_00954 pyrG CTP synthase COG:COG0504, COG:F, EC:6.3.4.2, GO:0003883, GO:0004359, GO:0005524, GO:0005829, GO:0006221, GO:0006241, GO:0019856, GO:0042802, GO:0044210, GO:0046872, RefSeq:WP_011275219.1, SO:0001217, UniParc:UPI000054B913, UniRef:UniRef100_Q4L808, UniRef:UniRef50_Q4L808, UniRef:UniRef90_Q4L808 contig_1 cds 794522 795043 - GCA012955505_00955 DUF2529 domain-containing protein RefSeq:WP_011275220.1, SO:0001217, UniParc:UPI000054B914, UniRef:UniRef100_A0A2A1K6R7, UniRef:UniRef50_Q2FWD2, UniRef:UniRef90_A0A2A1K6R7 contig_1 cds 795218 796075 + GCA012955505_00956 fba class II fructose-bisphosphate aldolase COG:COG0191, COG:G, EC:4.1.2.13, GO:0004332, GO:0006096, GO:0008270, GO:0030388, KEGG:K01624, RefSeq:WP_011275221.1, SO:0001217, UniParc:UPI000054B915, UniRef:UniRef100_A0A2A1KBR7, UniRef:UniRef50_P94453, UniRef:UniRef90_Q5HM97 contig_1 cds 796358 797629 + GCA012955505_00957 murA1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase COG:COG0766, COG:M, EC:2.5.1.7, GO:0005737, GO:0008360, GO:0008760, GO:0009252, GO:0019277, GO:0051301, GO:0071555, KEGG:K00790, RefSeq:WP_011275222.1, SO:0001217, UniParc:UPI000054B916, UniRef:UniRef100_Q4L805, UniRef:UniRef50_P19670, UniRef:UniRef90_Q4L805 contig_1 cds 797816 798151 + GCA012955505_00958 hxlR Transcriptional regulator, HxlR family COG:COG1733, COG:K, RefSeq:WP_011275223.1, SO:0001217, UniParc:UPI000054B917, UniRef:UniRef100_A0A2A1K8Y5, UniRef:UniRef50_B9DMD6, UniRef:UniRef90_A0A380FXU3 contig_1 cds 798320 799747 + GCA012955505_00959 adhE Putative aldehyde dehydrogenase SH0913 COG:COG1012, COG:I, EC:1.2.1.3, GO:0004029, RefSeq:WP_029376675.1, SO:0001217, UniParc:UPI000156802D, UniRef:UniRef100_Q4L803, UniRef:UniRef50_Q4L803, UniRef:UniRef90_Q4L803 contig_1 cds 800014 801297 + GCA012955505_00960 rho transcription termination factor Rho COG:COG1158, COG:K, EC:3.6.4.-, GO:0003723, GO:0005524, GO:0006353, GO:0008186, KEGG:K03628, SO:0001217, UniRef:UniRef50_A0A2D6ZY33, UniRef:UniRef90_A0A133PU93 contig_1 ncRNA-region 801377 801406 + L31-Firmicutes ribosomal protein leader RFAM:RF03156, SO:0000140 contig_1 cds 801417 801674 + GCA012955505_00961 rpmE2 type B 50S ribosomal protein L31 COG:COG0254, COG:J, GO:0003735, GO:0005840, GO:0006412, GO:1990904, RefSeq:WP_011275226.1, SO:0001217, UniParc:UPI000054B91A, UniRef:UniRef100_Q4L801, UniRef:UniRef50_Q5HMA2, UniRef:UniRef90_Q5HMA2 contig_1 cds 801825 802424 + GCA012955505_00962 tdk thymidine kinase COG:COG1435, COG:F, EC:2.7.1.21, GO:0004797, GO:0005524, GO:0005829, GO:0008270, GO:0046104, GO:0071897, KEGG:K00857, RefSeq:WP_011275227.1, SO:0001217, UniParc:UPI000054B91B, UniRef:UniRef100_Q4L800, UniRef:UniRef50_Q97F65, UniRef:UniRef90_Q4L800 contig_1 cds 802424 803500 + GCA012955505_00963 prfA peptide chain release factor 1 GO:0003747, GO:0006415, KEGG:K02835, SO:0001217, UniRef:UniRef50_B9DS45, UniRef:UniRef90_A0A974KX76 contig_1 cds 803487 804287 + GCA012955505_00964 prmC peptide chain release factor N(5)-glutamine methyltransferase COG:COG2890, COG:J, EC:2.1.1.297, GO:0006412, GO:0008757, GO:0018364, SO:0001217, UniRef:UniRef50_A0A0D0QVC7, UniRef:UniRef90_A0A7T8UUH9 contig_1 cds 804371 805414 + GCA012955505_00965 tsaC L-threonylcarbamoyladenylate synthase COG:COG0009, COG:J, EC:2.7.7.87, GO:0003725, GO:0006400, GO:0061710, RefSeq:WP_011275230.1, SO:0001217, UniParc:UPI000054B91E, UniRef:UniRef100_A0A7Z1N5D1, UniRef:UniRef50_A0A6K1LH12, UniRef:UniRef90_A0A7Z1N5D1 contig_1 cds 805411 805827 + GCA012955505_00966 ptpB Low molecular weight protein-tyrosine-phosphatase PtpB COG:COG0394, COG:T, EC:3.1.3.48, GO:0004726, GO:0030946, GO:0140793, RefSeq:WP_011275231.1, SO:0001217, UniParc:UPI000054B91F, UniRef:UniRef100_Q4L7Z6, UniRef:UniRef50_Q4L7Z6, UniRef:UniRef90_Q4L7Z6 contig_1 cds 805938 806462 + GCA012955505_00967 ywlG UPF0340 protein SH0921 COG:COG4475, COG:S, RefSeq:WP_145463287.1, SO:0001217, UniParc:UPI00119C939B, UniRef:UniRef100_UPI00119C939B, UniRef:UniRef50_Q2FWE4, UniRef:UniRef90_Q4L7Z5 contig_1 cds 806489 807727 + GCA012955505_00968 glyA Serine hydroxymethyltransferase COG:COG0112, COG:E, EC:2.1.2.1, GO:0004372, GO:0005829, GO:0019264, GO:0030170, GO:0035999, KEGG:K00600, RefSeq:WP_016931218.1, SO:0001217, UniParc:UPI0002E0D836, UniRef:UniRef100_A0A2T4SML7, UniRef:UniRef50_Q2FWE5, UniRef:UniRef90_Q4L7Z4 contig_1 cds 807754 808383 + GCA012955505_00969 upp uracil phosphoribosyltransferase COG:COG0035, COG:F, EC:2.4.2.9, GO:0000287, GO:0004845, GO:0005525, GO:0006223, GO:0009116, GO:0044206, RefSeq:WP_145463288.1, SO:0001217, UniParc:UPI0011AA2ED5, UniRef:UniRef100_UPI0011AA2ED5, UniRef:UniRef50_Q9RU32, UniRef:UniRef90_Q2FWE6 contig_1 cds 808402 809535 + GCA012955505_00970 wecB non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase COG:COG0381, COG:M, EC:5.1.3.14, GO:0008761, KEGG:K01791, RefSeq:WP_033079611.1, SO:0001217, UniParc:UPI00044C489E, UniRef:UniRef100_A0A7T8UU60, UniRef:UniRef50_A0A1Y3QEC8, UniRef:UniRef90_Q4L7Z2 contig_1 cds 810048 810773 + GCA012955505_00971 atpB F0F1 ATP synthase subunit A COG:C, COG:COG0356, EC:7.1.2.2, GO:0005886, GO:0015078, GO:0015986, GO:0042777, GO:0045263, GO:0046933, KEGG:K02108, RefSeq:WP_011275237.1, SO:0001217, UniParc:UPI000054B925, UniRef:UniRef100_Q4L7Z0, UniRef:UniRef50_Q2G2F4, UniRef:UniRef90_Q4L7Z0 contig_1 cds 810806 811018 + GCA012955505_00972 atpE F0F1 ATP synthase subunit C COG:C, COG:COG0636, EC:7.1.2.2, GO:0005886, GO:0008289, GO:0015078, GO:0015986, GO:0045263, GO:0046933, RefSeq:WP_011275238.1, SO:0001217, UniParc:UPI000054B926, UniRef:UniRef100_Q4L7Y9, UniRef:UniRef50_P37815, UniRef:UniRef90_B9DME9 contig_1 cds 811104 811634 + GCA012955505_00973 atpF F0F1 ATP synthase subunit B COG:C, COG:COG0711, GO:0005886, GO:0045263, GO:0046933, GO:0046961, RefSeq:WP_016931216.1, SO:0001217, UniParc:UPI00030AC8CF, UniRef:UniRef100_A0A2A1K8G3, UniRef:UniRef50_Q49Z54, UniRef:UniRef90_Q4L7Y8 contig_1 cds 811634 812173 + GCA012955505_00974 atpH F0F1 ATP synthase subunit delta COG:C, COG:COG0712, EC:7.1.2.2, GO:0005886, GO:0045261, GO:0046933, RefSeq:WP_011275240.1, SO:0001217, UniParc:UPI000054B928, UniRef:UniRef100_Q4L7Y7, UniRef:UniRef50_Q2FWE7, UniRef:UniRef90_Q4L7Y7 contig_1 cds 812194 813672 + GCA012955505_00975 atpA F0F1 ATP synthase subunit alpha COG:C, COG:COG0056, EC:7.1.2.2, GO:0005524, GO:0005886, GO:0015986, GO:0043531, GO:0045261, GO:0046933, GO:0046961, SO:0001217, UniRef:UniRef50_P26679, UniRef:UniRef90_Q2FWE8 contig_1 cds 813629 814543 + GCA012955505_00976 atpG ATP synthase F1 subunit gamma COG:C, COG:COG0224, EC:7.1.2.2, GO:0005524, GO:0005886, GO:0015986, GO:0042777, GO:0045261, GO:0046933, KEGG:K02115, SO:0001217, UniRef:UniRef50_Q49Z51, UniRef:UniRef90_Q4L7Y5 contig_1 cds 814565 815977 + GCA012955505_00977 atpD F0F1 ATP synthase subunit beta COG:C, COG:COG0055, EC:7.1.2.2, GO:0005524, GO:0005886, GO:0015986, GO:0016887, GO:0045261, GO:0046933, GO:0046961, RefSeq:WP_011275243.1, SO:0001217, UniParc:UPI000054B92B, UniRef:UniRef100_Q4L7Y4, UniRef:UniRef50_P06541, UniRef:UniRef90_Q4L7Y4 contig_1 cds 815998 816399 + GCA012955505_00978 atpC F0F1 ATP synthase subunit epsilon COG:C, COG:COG0355, EC:7.1.2.2, GO:0005524, GO:0005886, GO:0015986, GO:0045261, GO:0046933, RefSeq:WP_011275244.1, SO:0001217, UniParc:UPI000054B92C, UniRef:UniRef100_Q4L7Y3, UniRef:UniRef50_Q8CNJ8, UniRef:UniRef90_Q4L7Y3 contig_1 cds 816527 816760 + GCA012955505_00979 ywzB DUF1146 domain-containing protein COG:COG4836, COG:S, RefSeq:WP_016931215.1, SO:0001217, UniParc:UPI00036AA7A7, UniRef:UniRef100_UPI00036AA7A7, UniRef:UniRef50_Q2FWF3, UniRef:UniRef90_A0A2A1K6S0 contig_1 cds 816865 818130 + GCA012955505_00980 murA UDP-N-acetylglucosamine 1-carboxyvinyltransferase COG:COG0766, COG:M, EC:2.5.1.7, GO:0005737, GO:0008360, GO:0008760, GO:0009252, GO:0019277, GO:0051301, GO:0071555, KEGG:K00790, RefSeq:WP_016931214.1, SO:0001217, UniParc:UPI0002E7E5C3, UniRef:UniRef100_A0A2A1K9R2, UniRef:UniRef50_P33986, UniRef:UniRef90_Q4L7Y1 contig_1 cds 818170 818607 + GCA012955505_00981 fabZ 3-hydroxyacyl-ACP dehydratase FabZ COG:COG0764, COG:I, EC:4.2.1.59, GO:0005737, GO:0006633, GO:0009245, GO:0016020, GO:0019171, KEGG:K02372, RefSeq:WP_016931213.1, SO:0001217, UniParc:UPI0002E7B5C5, UniRef:UniRef100_A0A2A1KAE5, UniRef:UniRef50_Q2FWF5, UniRef:UniRef90_Q5HMC3 contig_1 cds 818581 819057 - GCA012955505_00982 ywpF YwpF protein SO:0001217, UniRef:UniRef50_Q2FWF6, UniRef:UniRef90_A0A2A1KBR5 contig_1 cds 819226 819624 + GCA012955505_00983 ssb Single-stranded DNA-binding protein COG:COG0629, COG:L, RefSeq:WP_016931212.1, SO:0001217, UniParc:UPI0002FF21C0, UniRef:UniRef100_A0A7Z1SCB7, UniRef:UniRef50_Q8CNK0, UniRef:UniRef90_A0A2A1K8F3 contig_1 cds 819954 820661 + GCA012955505_00984 sceD putative transglycosylase SceD EC:3.2.-.-, GO:0005576, GO:0016798, RefSeq:WP_011275250.1, SO:0001217, UniParc:UPI000054B932, UniRef:UniRef100_Q4L7X7, UniRef:UniRef50_Q2FWF8, UniRef:UniRef90_Q4L7X7 contig_1 ncRNA-region 820772 820874 + TPP riboswitch aptamer (THI element) RFAM:RF00059, SO:0000035 contig_1 cds 820950 821639 + GCA012955505_00985 tenA thiaminase II COG:COG0819, COG:H, EC:3.5.99.2, GO:0005829, GO:0006772, GO:0009228, GO:0009229, GO:0050334, RefSeq:WP_011275251.1, SO:0001217, UniParc:UPI000054B933, UniRef:UniRef100_Q4L7X6, UniRef:UniRef50_Q6GEY1, UniRef:UniRef90_Q4L7X6 contig_1 cds 821632 822453 + GCA012955505_00986 thiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase COG:COG0351, COG:H, RefSeq:WP_037571333.1, SO:0001217, UniParc:UPI0004A972AF, UniRef:UniRef100_A0A2A1K928, UniRef:UniRef50_P66915, UniRef:UniRef90_A0A7T8ZPX1 contig_1 cds 822446 823237 + GCA012955505_00987 thiM hydroxyethylthiazole kinase COG:COG2145, COG:H, EC:2.7.1.50, GO:0000287, GO:0004417, GO:0005524, GO:0009228, GO:0009229, KEGG:K00878, RefSeq:WP_037571329.1, SO:0001217, UniParc:UPI0004A926B3, UniRef:UniRef100_A0A2A1K8V6, UniRef:UniRef50_Q6GEY3, UniRef:UniRef90_Q4L7X4 contig_1 cds 823239 823397 + GCA012955505_00988 (pseudo) thiamine phosphate synthase SO:0001217, UniRef:UniRef50_UPI001EE1D367, UniRef:UniRef90_UPI001EE1D367 contig_1 cds 823517 823864 + GCA012955505_00989 Thiamine-phosphate pyrophosphorylase SO:0001217, UniRef:UniRef50_A0A380FM24 contig_1 cds 823953 824855 + GCA012955505_00990 yidC Membrane protein insertase YidC COG:COG0706, COG:M, GO:0005886, GO:0015031, GO:0032977, GO:0051205, KEGG:K03217, SO:0001217, UniRef:UniRef50_Q8CMK8, UniRef:UniRef90_Q4L7X2 contig_1 cds 824845 825090 + GCA012955505_00991 transposase SO:0001217, UniRef:UniRef50_UPI000AF838FB, UniRef:UniRef90_UPI001E4FBD14 contig_1 cds 825144 825761 - GCA012955505_00992 rnaY HD/PDEase domain-containing protein COG:COG1418, COG:JR, KEGG:K06950, SO:0001217, UniRef:UniRef50_Q2FWG7, UniRef:UniRef90_Q4L7X0 contig_1 cds 825861 827345 - GCA012955505_00993 cls cardiolipin synthase COG:COG1502, COG:I, EC:2.7.8.-, GO:0008808, GO:0016780, GO:0032049, KEGG:K06131, RefSeq:WP_011275257.1, SO:0001217, UniParc:UPI000054B939, UniRef:UniRef100_A0A7Z1MWV6, UniRef:UniRef50_Q8Y4E3, UniRef:UniRef90_A0A7Z1MWV6 contig_1 cds 827469 827825 + GCA012955505_00994 csoR Copper-sensing transcriptional repressor CsoR COG:COG1937, COG:K, SO:0001217, UniRef:UniRef50_K9AII0, UniRef:UniRef90_A0A2K0A6N0 contig_1 cds 827837 828043 + GCA012955505_00995 csoZ putative copper chaperone CsoZ RefSeq:WP_011275259.1, SO:0001217, UniParc:UPI000054B93B, UniRef:UniRef100_A0A2A1K7I8, UniRef:UniRef50_A0A380FZH1, UniRef:UniRef90_A0A2K0A6P2 contig_1 cds 828151 828291 + GCA012955505_00996 Lmo0850 family protein SO:0001217, UniRef:UniRef50_A0A0H2VHK0, UniRef:UniRef90_A0A2J9WVV9 contig_1 ncRNA 828301 828526 - GCA012955505_00997 tsr24 S. aureus tsr24 small RNA RFAM:RF02577, SO:0000655 contig_1 cds 828546 828833 + GCA012955505_00998 transposase SO:0001217, UniRef:UniRef50_A0A9Q5JM32, UniRef:UniRef90_UPI0021B1FAF0 contig_1 cds 828733 829824 - GCA012955505_00999 ftsW Rod shape-determining protein RodA COG:COG0772, COG:D, KEGG:K05837, SO:0001217, UniRef:UniRef50_Q2FWH2, UniRef:UniRef90_A0A4Z1B0U2 contig_1 cds 830069 831139 + GCA012955505_01000 ddl D-alanine--D-alanine ligase COG:COG1181, COG:MR, EC:6.3.2.4, GO:0005524, GO:0005829, GO:0008360, GO:0008716, GO:0009252, GO:0046872, GO:0071555, RefSeq:WP_048668181.1, SO:0001217, UniParc:UPI00066076A0, UniRef:UniRef100_UPI00066076A0, UniRef:UniRef50_Q8NVH8, UniRef:UniRef90_Q4L7W2 contig_1 cds 831155 832510 + GCA012955505_01001 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase COG:COG0770, COG:M, EC:6.3.2.10, KEGG:K01929, RefSeq:WP_011275264.1, SO:0001217, UniParc:UPI000054B940, UniRef:UniRef100_A0A7Z1N4R0, UniRef:UniRef50_Q2FWH4, UniRef:UniRef90_A0A2A1K6V0 contig_1 cds 832781 834292 + GCA012955505_01002 cshA DEAD-box ATP-dependent RNA helicase CshA COG:COG0513, COG:L, EC:3.6.4.13, GO:0003689, GO:0003724, GO:0005524, GO:0005829, GO:0005840, GO:0006401, GO:0009409, GO:0010501, GO:0016887, GO:0033592, GO:0061775, GO:0140584, GO:0140665, GO:0140849, RefSeq:WP_016931362.1, SO:0001217, UniParc:UPI00030480D5, UniRef:UniRef100_A0A7Z1N2K2, UniRef:UniRef50_Q2FWH5, UniRef:UniRef90_Q5HME0 contig_1 cds 834458 834844 + GCA012955505_01003 PH domain-containing protein SO:0001217, UniRef:UniRef50_UPI001D13B969 contig_1 cds 835078 835392 + GCA012955505_01004 hypothetical protein contig_1 cds 835367 835819 + GCA012955505_01005 (pseudo) PH domain-containing protein SO:0001217, UniRef:UniRef50_UPI002555C26B, UniRef:UniRef90_UPI002DB94781 contig_1 cds 836172 836417 + GCA012955505_01006 hypothetical protein PFAM:PF01648.25 contig_1 cds 836457 837197 + GCA012955505_01007 Alanine racemase SO:0001217, UniRef:UniRef50_A0A3E0ILU6 contig_1 cds 837290 837637 + GCA012955505_01008 hypothetical protein PFAM:PF00842.27 contig_1 cds 837589 837759 + GCA012955505_01009 mazE type II toxin-antitoxin system antitoxin MazE BlastRules:WP_000948331, BlastRules:WP_001829931, BlastRules:WP_011275271, BlastRules:WP_011302702, GO:0006355, RefSeq:WP_049426542.1, SO:0001217, UniParc:UPI00066D04A8, UniRef:UniRef100_UPI00066D04A8, UniRef:UniRef50_Q2FWI7, UniRef:UniRef90_Q4L7V4 contig_1 cds 837756 838040 + GCA012955505_01010 Endoribonuclease EndoA SO:0001217, UniRef:UniRef50_P96622 contig_1 cds 838188 838967 + GCA012955505_01011 SigmaB regulation protein RsbU, putative SO:0001217, UniRef:UniRef50_Q2FWJ1 contig_1 cds 839066 839392 + GCA012955505_01012 rsbV Anti-sigma-B factor antagonist COG:COG5815, COG:DT, GO:0043856, RefSeq:WP_049426540.1, SO:0001217, UniParc:UPI00066CEEC3, UniRef:UniRef100_UPI0030C3A243, UniRef:UniRef50_P60070, UniRef:UniRef90_Q5HME9 contig_1 cds 839394 839876 + GCA012955505_01013 rsbW anti-sigma B factor RsbW COG:COG2172, COG:T, EC:2.7.11.1, SO:0001217, UniRef:UniRef50_P17904, UniRef:UniRef90_A0A380FZL1 contig_1 cds 839851 840429 + GCA012955505_01014 sigB (pseudo) RNA polymerase sigma factor SigB GO:0003700, GO:0006352, GO:0016987, KEGG:K03090, SO:0001217, UniRef:UniRef50_P06574, UniRef:UniRef90_Q5HMF1 contig_1 cds 840441 840620 + GCA012955505_01015 sigma-70 family RNA polymerase sigma factor SO:0001217, UniRef:UniRef50_UPI0034D336AE contig_1 cds 840734 841162 + GCA012955505_01016 hypothetical protein PFAM:PF09371.15 contig_1 cds 841257 841415 + GCA012955505_01017 hypothetical protein contig_1 cds 841405 841815 + GCA012955505_01018 helix-hairpin-helix domain-containing protein SO:0001217, UniRef:UniRef50_UPI0021CD0948 contig_1 cds 841793 842008 + GCA012955505_01019 (pseudo) helix-hairpin-helix domain-containing protein SO:0001217, UniRef:UniRef50_A0A380DXZ7, UniRef:UniRef90_UPI000D9956F9 contig_1 cds 842234 842689 + GCA012955505_01020 sprT SprT family protein COG:COG3091, COG:R, RefSeq:WP_049426538.1, SO:0001217, UniParc:UPI00066DDBF2, UniRef:UniRef100_UPI00066DDBF2, UniRef:UniRef50_B9DMI1, UniRef:UniRef90_A0A2A1K4Y9 contig_1 tRNA 842944 843029 + GCA012955505_01021 trnL tRNA-Leu(gag) SO:0000264 contig_1 tRNA 843051 843124 + GCA012955505_01022 trnG tRNA-Gly(tcc) SO:0000260 contig_1 rRNA 843396 843510 + GCA012955505_01023 rrf 5S ribosomal RNA GO:0003735, GO:0005840, KEGG:K01985, RFAM:RF00001, SO:0000652 contig_1 cds 844377 845645 - GCA012955505_01024 ilvA threonine ammonia-lyase IlvA COG:COG1171, COG:E, EC:4.3.1.19, GO:0003941, GO:0004794, GO:0006520, GO:0006565, GO:0006566, GO:0006567, GO:0009097, GO:0030170, RefSeq:WP_049426574.1, SO:0001217, UniParc:UPI00066B1030, UniRef:UniRef100_UPI00066B1030, UniRef:UniRef50_P37946, UniRef:UniRef90_Q4L7U4 contig_1 cds 845652 846227 - GCA012955505_01025 leuD 3-isopropylmalate dehydratase small subunit COG:COG0066, COG:E, EC:4.2.1.33, GO:0003861, GO:0009098, GO:0009316, RefSeq:WP_011275281.1, SO:0001217, UniParc:UPI000054B951, UniRef:UniRef100_Q4L7U3, UniRef:UniRef50_Q8Y5R6, UniRef:UniRef90_Q4L7U3 contig_1 cds 846230 847600 - GCA012955505_01026 leuC 3-isopropylmalate dehydratase large subunit COG:COG0065, COG:E, EC:4.2.1.33, GO:0003861, GO:0009098, GO:0046872, GO:0051539, KEGG:K01703, RefSeq:WP_011275282.1, SO:0001217, UniParc:UPI000054B952, UniRef:UniRef100_Q4L7U2, UniRef:UniRef50_P80858, UniRef:UniRef90_Q4L7U2 contig_1 cds 847618 848574 - GCA012955505_01027 leuB 3-isopropylmalate dehydrogenase COG:CE, COG:COG0473, EC:1.1.1.85, GO:0000287, GO:0003862, GO:0005829, GO:0009098, GO:0051287, KEGG:K00052, SO:0001217, UniRef:UniRef50_Q49Z13, UniRef:UniRef90_Q4L7U1 contig_1 cds 848574 850106 - GCA012955505_01028 leuA 2-isopropylmalate synthase COG:COG0119, COG:E, EC:2.3.3.13, GO:0003852, GO:0003985, GO:0005737, GO:0009098, GO:0030145, KEGG:K01649, RefSeq:WP_011275284.1, SO:0001217, UniParc:UPI000054B954, UniRef:UniRef100_Q4L7U0, UniRef:UniRef50_Q4L7U0, UniRef:UniRef90_Q4L7U0 contig_1 cds 850127 851131 - GCA012955505_01029 ilvC ketol-acid reductoisomerase COG:COG0059, COG:EH, EC:1.1.1.86, GO:0000287, GO:0004455, GO:0005829, GO:0009097, GO:0009099, GO:0050661, KEGG:K00053, RefSeq:WP_053020192.1, SO:0001217, UniParc:UPI00069F97B9, UniRef:UniRef100_UPI0034D69E24, UniRef:UniRef50_Q0AV19, UniRef:UniRef90_Q4L7T9 contig_1 cds 851267 851509 - GCA012955505_01030 ilvH ACT domain-containing protein COG:COG0440, COG:E, EC:2.2.1.6, KEGG:K01653, RefSeq:WP_049426572.1, SO:0001217, UniParc:UPI00066EEF29, UniRef:UniRef100_UPI001A9483D1, UniRef:UniRef50_A0A7Z8E1T8, UniRef:UniRef90_A0A2A1KCT6 contig_1 cds 851506 853281 - GCA012955505_01031 ilvB biosynthetic-type acetolactate synthase large subunit COG:COG0028, COG:EH, EC:2.2.1.6, GO:0000287, GO:0003984, GO:0009082, GO:0030976, GO:0050660, KEGG:K01652, SO:0001217, UniRef:UniRef50_Q02137, UniRef:UniRef90_Q4L7T7 contig_1 cds 853300 854988 - GCA012955505_01032 ilvD dihydroxy-acid dehydratase COG:COG0129, COG:EG, EC:4.2.1.9, GO:0000287, GO:0004160, GO:0005829, GO:0009082, GO:0009097, GO:0009099, GO:0051536, GO:0051537, KEGG:K01687, RefSeq:WP_011275288.1, SO:0001217, UniParc:UPI000054B958, UniRef:UniRef100_Q4L7T6, UniRef:UniRef50_Q2FWK7, UniRef:UniRef90_Q2FWK7 contig_1 ncRNA 855057 855250 - GCA012955505_01033 rli60 Listeria sRNA rli60 RFAM:RF02414, SO:0000655 contig_1 cds 855307 855750 + GCA012955505_01034 tsaE tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE COG:COG0802, COG:J, GO:0002949, SO:0001217, UniRef:UniRef50_A0A291JJR3, UniRef:UniRef90_A0A2A1K954 contig_1 cds 855731 856348 + GCA012955505_01035 tsaB tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB COG:COG1214, COG:J, EC:2.3.1.234, GO:0002949, SO:0001217, UniRef:UniRef50_A0AAE2ZX37, UniRef:UniRef90_A0A2A1KE96 contig_1 cds 856321 856785 + GCA012955505_01036 rimI ribosomal protein S18-alanine N-acetyltransferase COG:COG0456, COG:J, EC:2.3.1.266, GO:0008999, GO:0036211, GO:0042254, RefSeq:WP_016931067.1, SO:0001217, UniParc:UPI0002FECFA1, UniRef:UniRef100_A0A2A1KBJ6, UniRef:UniRef50_A0A855GHV1, UniRef:UniRef90_A0A7Z1SDG8 contig_1 cds 856778 857806 + GCA012955505_01037 tsaD tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD COG:COG0533, COG:J, EC:2.3.1.234, GO:0002949, GO:0005506, GO:0005737, GO:0061711, RefSeq:WP_016931066.1, SO:0001217, UniParc:UPI0002E2F37B, UniRef:UniRef100_A0A7Z1S9Q3, UniRef:UniRef50_Q2FWL2, UniRef:UniRef90_Q4L7T2 contig_1 cds 858189 860120 - GCA012955505_01038 abc-f ribosomal protection-like ABC-F family protein COG:COG0488, COG:R, GO:0003677, GO:0005524, GO:0016887, SO:0001217, UniRef:UniRef50_A0A131I335, UniRef:UniRef90_A0A2A1KAL5 contig_1 cds 860350 860952 + GCA012955505_01039 rex redox-sensing transcriptional repressor Rex COG:COG2344, COG:K, GO:0003677, GO:0003700, GO:0005737, GO:0045892, GO:0051775, KEGG:K01926, SO:0001217, UniRef:UniRef50_Q2FWL6, UniRef:UniRef90_Q4L7T0 contig_1 cds 861149 862237 + GCA012955505_01040 yedE putative membrane protein YedE/YeeE, contains two sulfur transport domains COG:COG2391, COG:R, SO:0001217, UniRef:UniRef50_A0A7U7JQE1, UniRef:UniRef90_Q4L7S9 contig_1 cds 862257 862481 + GCA012955505_01041 tusA UPF0033 domain-containing protein COG:COG0425, COG:JHO, RefSeq:WP_011275296.1, SO:0001217, UniParc:UPI000054B960, UniRef:UniRef100_A0A2A1KCS8, UniRef:UniRef50_A0A7U7JQM0, UniRef:UniRef90_Q49YZ8 contig_1 cds 862501 863733 + GCA012955505_01042 amtB Ammonium transporter COG:COG0004, COG:P, KEGG:K03320, SO:0001217, UniRef:UniRef50_A0A0D0SEH5, UniRef:UniRef90_Q4L7S7 contig_1 cds 863786 864466 + GCA012955505_01043 lacI Sucrose operon repressor ScrR, LacI family SO:0001217, UniRef:UniRef50_A0A7Z7W2L0 contig_1 cds 864733 866220 + GCA012955505_01044 sacC Sucrose-6-phosphate hydrolase COG:COG1621, COG:G, SO:0001217, UniRef:UniRef50_Q05936, UniRef:UniRef90_Q4L7S5 contig_1 cds 866224 867189 + GCA012955505_01045 rbsK Carbohydrate kinase PfkB domain-containing protein COG:COG0524, COG:G, RefSeq:WP_037569564.1, SO:0001217, UniParc:UPI0004A9910D, UniRef:UniRef100_UPI0004A9910D, UniRef:UniRef50_A0A0Y9VKF8, UniRef:UniRef90_Q4L7S4 contig_1 cds 867306 867950 - GCA012955505_01046 agrA quorum-sensing response regulator AgrA COG:COG3279, COG:KT, SO:0001217, UniRef:UniRef50_Q5HMY2, UniRef:UniRef90_A0A1B1M0S9 contig_1 cds 868030 868782 - GCA012955505_01047 agrC Regulator protein agrC SO:0001217, UniRef:UniRef50_A0A811FR92 contig_1 cds 869002 869139 - GCA012955505_01048 Cyclic lactone autoinducer peptide RefSeq:WP_011275303.1, SO:0001217, UniParc:UPI000054B967, UniRef:UniRef100_A0A2A1KAK5, UniRef:UniRef50_G5JKT7, UniRef:UniRef90_A0A2A1KAK5 contig_1 cds 869142 869708 - GCA012955505_01049 agrB Accessory gene regulator protein B COG:COG4512, COG:KT, EC:3.4.-.-, GO:0005886, GO:0006508, GO:0008233, GO:0009372, KEGG:K07813, RefSeq:WP_011275304.1, SO:0001217, UniParc:UPI000054B968, UniRef:UniRef100_Q4L7S0, UniRef:UniRef50_Q54337, UniRef:UniRef90_Q4L7S0 contig_1 ncRNA 869914 870299 + GCA012955505_01050 RNAIII RNAIII RFAM:RF00503, SO:0000655 contig_1 cds 870345 871130 - GCA012955505_01051 nit1 Carbon-nitrogen family hydrolase COG:COG0388, COG:V, RefSeq:WP_046464943.1, SO:0001217, UniParc:UPI000623D2BB, UniRef:UniRef100_UPI000623D2BB, UniRef:UniRef50_P0DP65, UniRef:UniRef90_A0A2A1KC83 contig_1 cds 871323 871946 - GCA012955505_01052 fMR2 Nitroreductase family protein COG:COG3560, COG:R, KEGG:K07078, RefSeq:WP_016931056.1, SO:0001217, UniParc:UPI0002E7871D, UniRef:UniRef100_UPI0002E7871D, UniRef:UniRef50_Q2FWN0, UniRef:UniRef90_A0A2A1KCR8 contig_1 cds 872024 873598 + GCA012955505_01053 sdrH SdrH family protein SO:0001217, UniRef:UniRef50_UPI000B27BF9C contig_1 cds 873660 874400 - GCA012955505_01054 mroQ intramembrane glutamic endopeptidase MroQ COG:COG1266, COG:O, EC:3.4.26.-, RefSeq:WP_016931054.1, SO:0001217, UniParc:UPI0002DD0475, UniRef:UniRef100_A0A2A1KAU3, UniRef:UniRef50_A0A0H2XEK8, UniRef:UniRef90_A0A2A1KAU3 contig_1 cds 874577 874864 + GCA012955505_01055 groES co-chaperone GroES COG:COG0234, COG:O, GO:0005524, GO:0005737, GO:0044183, GO:0046872, GO:0051082, GO:0051085, GO:0051087, KEGG:K04078, RefSeq:WP_016931053.1, SO:0001217, UniParc:UPI000315D70B, UniRef:UniRef100_A0A2A1K935, UniRef:UniRef50_P37283, UniRef:UniRef90_Q4L7R5 contig_1 cds 874926 876545 + GCA012955505_01056 groL chaperonin GroEL COG:COG0459, COG:O, EC:5.6.1.7, GO:0005524, GO:0005737, GO:0016853, GO:0042026, GO:0051082, GO:0140662, RefSeq:WP_011275310.1, SO:0001217, UniParc:UPI000054B96E, UniRef:UniRef100_Q4L7R4, UniRef:UniRef50_Q9KKF0, UniRef:UniRef90_Q08854 contig_1 cds 876576 876974 + GCA012955505_01057 ClbS/DfsB family four-helix bundle protein SO:0001217, UniRef:UniRef50_W0PG25, UniRef:UniRef90_UPI002AD386BC contig_1 cds 877461 878747 - GCA012955505_01058 aspB Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme COG:COG0436, COG:E, RefSeq:WP_011275324.1, SO:0001217, UniParc:UPI000054B97C, UniRef:UniRef100_A0A2A1K925, UniRef:UniRef50_A0A380FXV6, UniRef:UniRef90_A0A2A1K925 contig_1 cds 878941 879036 + GCA012955505_01059 Trp-rich small protein RefSeq:WP_011275325.1, SO:0001217, UniParc:UPI000054B97D, UniRef:UniRef100_A0A7Z1MX04, UniRef:UniRef50_Q5HMZ5, UniRef:UniRef90_A0A7Z1MX04 contig_1 cds 879209 879355 + GCA012955505_01060 hypothetical protein contig_1 cds 879397 879777 + GCA012955505_01061 pmtR PSM export ABC transporter transcriptional regulator PmtR COG:COG1725, COG:K, KEGG:K07979, RefSeq:WP_011275327.1, SO:0001217, UniParc:UPI000054B97F, UniRef:UniRef100_A0A2A1KBG5, UniRef:UniRef50_R9LXS2, UniRef:UniRef90_A0A380FZJ6 contig_1 cds 879774 880574 + GCA012955505_01062 pmtA phenol-soluble modulin export ABC transporter ATP-binding protein PmtA COG:COG1131, COG:JV, SO:0001217, UniRef:UniRef50_A0A380DUR2, UniRef:UniRef90_A0A2A1KB81 contig_1 cds 880857 881105 + GCA012955505_01063 pmtB (pseudo) phenol-soluble modulin export ABC transporter permease subunit PmtB SO:0001217, UniRef:UniRef50_A0A8T6QHU0, UniRef:UniRef90_UPI0027F6B46E contig_1 cds 881269 882174 + GCA012955505_01064 pmtC phenol-soluble modulin export ABC transporter ATP-binding protein PmtC COG:COG1131, COG:JV, SO:0001217, UniRef:UniRef50_S2XE79, UniRef:UniRef90_A0A5B2YQ64 contig_1 cds 882138 882710 + GCA012955505_01065 ABC-2 transporter family protein SO:0001217, UniRef:UniRef50_A0A2X2K579 contig_1 cds 883072 883632 - GCA012955505_01066 Thioredoxin family protein SO:0001217, UniRef:UniRef50_Q2FWX1, UniRef:UniRef90_A0A2A1KCP8 contig_1 cds 883845 884324 + GCA012955505_01067 Lipoprotein SO:0001217, UniRef:UniRef50_A0A1J3ZSY5, UniRef:UniRef90_A0A7Z1SD84 contig_1 cds 884471 884788 + GCA012955505_01068 (pseudo) HAAS signaling domain-containing protein SO:0001217, UniRef:UniRef50_Q2FWX3, UniRef:UniRef90_UPI00069FDE95 contig_1 cds 884808 885362 + GCA012955505_01069 DUF4097 domain-containing protein SO:0001217, UniRef:UniRef50_UPI00214DD358 contig_1 cds 885597 886637 - GCA012955505_01070 Acyl-CoA--6-aminopenicillanic acid acyltransferase COG:COG4927, COG:R, RefSeq:WP_011275336.1, SO:0001217, UniParc:UPI000054B988, UniRef:UniRef100_A0A2A1KE53, UniRef:UniRef50_A0A380GLM7, UniRef:UniRef90_A0A2A1KE53 contig_1 cds 886803 886922 + GCA012955505_01071 hypothetical protein contig_1 cds 887064 888098 + GCA012955505_01072 pgl putative protein SH1032 COG:COG2706, COG:G, GO:0005829, GO:0017057, RefSeq:WP_011275338.1, SO:0001217, UniParc:UPI000054B98A, UniRef:UniRef100_Q4L7N4, UniRef:UniRef50_Q2FWX8, UniRef:UniRef90_Q4L7N4 contig_1 cds 888150 889532 - GCA012955505_01073 adhE Aldehyde dehydrogenase COG:COG1012, COG:I, RefSeq:WP_011275339.1, SO:0001217, UniParc:UPI000054B98B, UniRef:UniRef100_A0A2A1KB71, UniRef:UniRef50_Q2FWX9, UniRef:UniRef90_A0A2A1KB71 contig_1 cds 889699 890628 - GCA012955505_01074 ppaC manganese-dependent inorganic pyrophosphatase COG:C, COG:COG1227, EC:3.6.1.1, GO:0004427, GO:0005737, GO:0030145, KEGG:K15986, RefSeq:WP_016931031.1, SO:0001217, UniParc:UPI0002EE32D7, UniRef:UniRef100_A0A2A1KAI1, UniRef:UniRef50_P37487, UniRef:UniRef90_Q4L7N2 contig_1 cds 890679 891239 - GCA012955505_01075 pncA Cysteine hydrolase COG:COG1335, COG:HR, RefSeq:WP_011275341.1, SO:0001217, UniParc:UPI000054B98D, UniRef:UniRef100_A0A2A1K946, UniRef:UniRef50_O32091, UniRef:UniRef90_A0A2A1K946 contig_1 cds 891383 892465 + GCA012955505_01076 pgu1 Pectate lyase COG:COG5434, COG:G, RefSeq:WP_011275342.1, SO:0001217, UniParc:UPI000054B98E, UniRef:UniRef100_A0A2A1KC52, UniRef:UniRef50_A0A2U0IGB7, UniRef:UniRef90_A0A2A1KC52 contig_1 cds 892624 893424 - GCA012955505_01077 pheA2 prephenate dehydratase COG:COG0077, COG:E, RefSeq:WP_011275343.1, SO:0001217, UniParc:UPI000054B98F, UniRef:UniRef100_A0A2A1KCP2, UniRef:UniRef50_A0A0E7Y8C1, UniRef:UniRef90_A0A2A1KCP2 contig_1 cds 893454 893900 - GCA012955505_01078 Nitric-oxide synthase-like protein SO:0001217, UniRef:UniRef50_A0A380H3G6 contig_1 cds 893987 894514 - GCA012955505_01079 Nitric-oxide synthase-like protein SO:0001217, UniRef:UniRef50_A0A380H191 contig_1 cds 894691 894873 + GCA012955505_01080 hypothetical protein PFAM:PF17767.7 contig_1 cds 894884 896056 + GCA012955505_01081 Nicotinate phosphoribosyltransferase SO:0001217, UniRef:UniRef50_A0A0U4EBJ5 contig_1 cds 896049 896840 + GCA012955505_01082 nadE ammonia-dependent NAD(+) synthetase COG:COG0171, COG:H, EC:6.3.1.5, GO:0003952, GO:0004359, GO:0005524, GO:0005737, GO:0008795, GO:0009435, GO:0046872, SO:0001217, UniRef:UniRef50_P18843, UniRef:UniRef90_Q4L7M6 contig_1 cds 896868 897476 + GCA012955505_01083 yebE UPF0316 protein SH1041 COG:COG4843, COG:S, GO:0005886, RefSeq:WP_011275347.1, SO:0001217, UniParc:UPI000054B993, UniRef:UniRef100_Q4L7M5, UniRef:UniRef50_Q2G2R9, UniRef:UniRef90_Q4L7M5 contig_1 cds 897457 897597 + GCA012955505_01084 NETI motif-containing protein SO:0001217, UniRef:UniRef50_A0A0U1MPT6 contig_1 cds 897860 899128 + GCA012955505_01085 purB adenylosuccinate lyase COG:COG0015, COG:F, EC:4.3.2.2, GO:0004018, GO:0005829, GO:0006189, GO:0009152, GO:0044208, GO:0070626, KEGG:K01756, SO:0001217, UniRef:UniRef50_Q2G2S0, UniRef:UniRef90_Q2G2S0 contig_1 cds 899223 899525 + GCA012955505_01086 yerC His repressor COG:COG4496, COG:R, RefSeq:WP_011275350.1, SO:0001217, UniParc:UPI000054B996, UniRef:UniRef100_A0A2A1KAH2, UniRef:UniRef50_Q7BVT7, UniRef:UniRef90_Q2G1Y1 contig_1 cds 899802 900497 + GCA012955505_01087 pcrB heptaprenylglyceryl phosphate synthase COG:COG1646, COG:I, EC:2.5.1.n9, GO:0000287, GO:0002094, GO:0046474, KEGG:K07094, RefSeq:WP_011275351.1, SO:0001217, UniParc:UPI000054B997, UniRef:UniRef100_Q4L7M1, UniRef:UniRef50_Q5L3C1, UniRef:UniRef90_Q4L7M1 contig_1 cds 900494 901690 + GCA012955505_01088 pcrA (pseudo) DNA helicase PcrA COG:COG0210, COG:L, EC:3.6.4.12, GO:0003678, GO:0005737, GO:0006268, GO:0006281, SO:0001217, UniRef:UniRef50_Q53727, UniRef:UniRef90_A0A5B2YRX8 contig_1 cds 901728 902618 + GCA012955505_01089 pcrA (pseudo) DNA helicase PcrA COG:COG0210, COG:L, EC:3.6.4.12, GO:0003678, GO:0005737, GO:0006268, GO:0006281, SO:0001217, UniRef:UniRef50_Q53727, UniRef:UniRef90_A0A5B2YRX8 contig_1 cds 902622 904625 + GCA012955505_01090 ligA NAD-dependent DNA ligase LigA COG:COG0272, COG:L, EC:6.5.1.2, GO:0003677, GO:0003911, GO:0005829, GO:0006260, GO:0006281, GO:0006288, GO:0046872, SO:0001217, UniRef:UniRef50_Q837V6, UniRef:UniRef90_Q4L7L9 contig_1 cds 904622 905827 + GCA012955505_01091 camS CamS family sex pheromone protein COG:COG4851, COG:R, RefSeq:WP_011275354.1, SO:0001217, UniParc:UPI000054B99A, UniRef:UniRef100_A0A7Z1N229, UniRef:UniRef50_Q2FWY6, UniRef:UniRef90_A0A2A1KE38 contig_1 cds 905886 907424 - GCA012955505_01092 putP sodium/proline symporter PutP COG:COG0591, COG:E, GO:0005298, GO:0005886, GO:0006814, GO:0015193, GO:0015824, GO:0016020, GO:0031402, RefSeq:WP_016931028.1, SO:0001217, UniParc:UPI00018E18C0, UniRef:UniRef100_Q4L7L6, UniRef:UniRef50_Q2FWY7, UniRef:UniRef90_Q4L7L6 contig_1 cds 907611 907913 + GCA012955505_01093 gatC Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC COG:COG0721, COG:J, EC:6.3.5.-, GO:0005524, GO:0006412, GO:0006424, GO:0006450, GO:0030956, GO:0050566, GO:0050567, GO:0070681, RefSeq:WP_011275356.1, SO:0001217, UniParc:UPI000054B99C, UniRef:UniRef100_Q4L7L5, UniRef:UniRef50_Q2FWY8, UniRef:UniRef90_Q4L7L5 contig_1 cds 907915 909372 + GCA012955505_01094 gatA Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA COG:COG0154, COG:J, EC:6.3.5.7, GO:0005524, GO:0006412, GO:0006424, GO:0030956, GO:0050567, KEGG:K02433, RefSeq:WP_011275357.1, SO:0001217, UniParc:UPI000054B99D, UniRef:UniRef100_Q4L7L4, UniRef:UniRef50_O06491, UniRef:UniRef90_P63488 contig_1 cds 909385 910812 + GCA012955505_01095 gatB Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB COG:COG0064, COG:J, EC:6.3.5.-, GO:0005524, GO:0006412, GO:0016884, GO:0050566, GO:0050567, GO:0070681, KEGG:K02434, RefSeq:WP_011275358.1, SO:0001217, UniParc:UPI000054B99E, UniRef:UniRef100_Q4L7L3, UniRef:UniRef50_Q45486, UniRef:UniRef90_Q45486 contig_1 cds 911061 912053 + GCA012955505_01096 dagK diacylglycerol kinase COG:COG1597, COG:IR, EC:2.7.1.107, GO:0003951, GO:0004143, GO:0005524, GO:0005886, GO:0008654, GO:0046872, RefSeq:WP_011275360.1, SO:0001217, UniParc:UPI000054B9A0, UniRef:UniRef100_Q4L7L1, UniRef:UniRef50_Q6GFF9, UniRef:UniRef90_Q4L7L1 contig_1 cds 912141 913520 + GCA012955505_01097 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD COG:COG2265, COG:J, EC:2.1.1.190, GO:0008649, KEGG:K03215, SO:0001217, UniRef:UniRef50_Q8CRU6, UniRef:UniRef90_Q4L7L0 contig_1 cds 913647 913841 + GCA012955505_01098 hypothetical protein contig_1 cds 913841 914068 + GCA012955505_01099 hypothetical protein contig_1 cds 914174 915022 + GCA012955505_01100 DNA-directed DNA polymerase SO:0001217, UniRef:UniRef50_A0A380FK26 contig_1 cds 914968 915228 + GCA012955505_01101 hypothetical protein PFAM:PF11799.13 contig_1 cds 915286 915945 - GCA012955505_01102 dnaQ Exonuclease domain-containing protein COG:COG0847, COG:L, SO:0001217, UniParc:UPI000054B9A4, UniRef:UniRef100_Q4L7K7, UniRef:UniRef50_Q4L7K7, UniRef:UniRef90_Q4L7K7 contig_1 cds 916081 916584 - GCA012955505_01103 ftnA H-type ferritin FtnA BlastRules:WP_000949467, COG:COG1528, COG:P, EC:1.16.3.2, GO:0004322, GO:0005829, GO:0006826, GO:0006880, GO:0008198, GO:0008199, SO:0001217, UniRef:UniRef50_Q2FWZ8, UniRef:UniRef90_Q4L7K6 contig_1 cds 916780 917796 + GCA012955505_01104 murT lipid II isoglutaminyl synthase subunit MurT SO:0001217, UniRef:UniRef50_UPI0006960109 contig_1 cds 917802 918083 + GCA012955505_01105 (pseudo) UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase EC:6.3.5.13, KEGG:K23393, SO:0001217, UniRef:UniRef50_A0A380EKT2, UniRef:UniRef90_A0A380EKT2 contig_1 cds 918086 918805 + GCA012955505_01106 gatD Lipid II isoglutaminyl synthase (glutamine-hydrolyzing) subunit GatD COG:COG3442, COG:R, EC:6.3.5.13, KEGG:K07009, RefSeq:WP_011275367.1, SO:0001217, UniParc:UPI000054B9A7, UniRef:UniRef100_A0A2A1KAP8, UniRef:UniRef50_A0A0H2WZ38, UniRef:UniRef90_A0A2A1KAP8 contig_1 cds 918869 919858 - GCA012955505_01107 ygaE UPF0421 protein SH1063 COG:COG4129, COG:S, GO:0005886, RefSeq:WP_011275368.1, SO:0001217, UniParc:UPI000054B9A8, UniRef:UniRef100_Q4L7K3, UniRef:UniRef50_Q2FX03, UniRef:UniRef90_Q4L7K3 contig_1 cds 919942 920715 + GCA012955505_01108 map type I methionyl aminopeptidase EC:3.4.11.18, GO:0006508, GO:0070006, KEGG:K01265, SO:0001217, UniRef:UniRef50_Q8CRU9, UniRef:UniRef90_UPI00119D3852 contig_1 cds 920840 921697 - GCA012955505_01109 yqjQ Oxidoreductase COG:COG0300, COG:R, RefSeq:WP_011275370.1, SO:0001217, UniParc:UPI000054B9AA, UniRef:UniRef100_A0A2A1KBC5, UniRef:UniRef50_A0A238KK92, UniRef:UniRef90_A0A2A1KBC5 contig_1 cds 921954 922781 - GCA012955505_01110 Nickel/cobalt efflux system KEGG:K07241, SO:0001217, UniParc:UPI000054B9AC, UniRef:UniRef100_Q4L7J9, UniRef:UniRef50_A0A317Z4A9, UniRef:UniRef90_Q4L7J9 contig_1 cds 923064 923348 + GCA012955505_01111 Staphylococcal protein SO:0001217, UniRef:UniRef50_A0A974KWH3, UniRef:UniRef90_UPI003133DCFA contig_1 cds 923373 924074 + GCA012955505_01112 liaF Transporter COG:COG4758, COG:T, KEGG:K11622, RefSeq:WP_011275374.1, SO:0001217, UniParc:UPI000054B9AE, UniRef:UniRef100_A0A2A1KAF3, UniRef:UniRef50_Q2FX07, UniRef:UniRef90_A0A2A1KAF3 contig_1 cds 924071 925117 + GCA012955505_01113 vraS Sensor protein VraS COG:COG4585, COG:T, EC:2.7.13.3, GO:0000155, GO:0005524, GO:0005886, GO:0046983, KEGG:K07681, SO:0001217, UniRef:UniRef50_Q7A2Q0, UniRef:UniRef90_Q7A2Q0 contig_1 cds 925107 925736 + GCA012955505_01114 vraR two-component system response regulator VraR BlastRules:WP_000153530, COG:COG2197, COG:TK, GO:0000160, GO:0003677, GO:0005737, GO:0006355, KEGG:K07694, RefSeq:WP_011275376.1, SO:0001217, UniParc:UPI000054B9B0, UniRef:UniRef100_Q4L7J5, UniRef:UniRef50_Q7A2Q1, UniRef:UniRef90_Q7A2Q1 contig_1 cds 925800 927011 - GCA012955505_01115 brkB YihY/virulence factor BrkB family protein COG:COG1295, COG:S, RefSeq:WP_145463240.1, SO:0001217, UniParc:UPI0011A145BA, UniRef:UniRef100_UPI0011A145BA, UniRef:UniRef50_A0A077UL04, UniRef:UniRef90_A0A2K0A6Z7 contig_1 cds 927208 927492 - GCA012955505_01116 ytxH YtxH domain-containing protein RefSeq:WP_011275378.1, SO:0001217, UniParc:UPI000054B9B2, UniRef:UniRef100_A0A2A1KE18, UniRef:UniRef50_A0A2K3ZIL3, UniRef:UniRef90_A0A2K0A710 contig_1 cds 927498 927962 - GCA012955505_01117 ptpA Low molecular weight protein-tyrosine-phosphatase PtpA COG:COG0394, COG:T, EC:3.1.3.48, GO:0004726, GO:0030946, GO:0140793, RefSeq:WP_011275379.1, SO:0001217, UniParc:UPI000054B9B3, UniRef:UniRef100_Q4L7J1, UniRef:UniRef50_Q2FX12, UniRef:UniRef90_Q4L7J1 contig_1 cds 928119 928253 + GCA012955505_01118 hypothetical protein contig_1 cds 928267 929514 + GCA012955505_01119 ampS Aminopeptidase COG:COG2309, COG:E, RefSeq:WP_011275381.1, SO:0001217, UniParc:UPI000054B9B5, UniRef:UniRef100_A0A2A1KE10, UniRef:UniRef50_A0A9N8IJS9, UniRef:UniRef90_A0A2A1KE10 contig_1 cds 929547 930080 + GCA012955505_01120 yciA Acyl-CoA hydrolase COG:COG1607, COG:I, RefSeq:WP_011275382.1, SO:0001217, UniParc:UPI000054B9B6, UniRef:UniRef100_A0A2A1KBB4, UniRef:UniRef50_A0A1D4PC79, UniRef:UniRef90_A0A380G0A6 contig_1 ncRNA 930197 930416 - GCA012955505_01121 tsr24 S. aureus tsr24 small RNA RFAM:RF02577, SO:0000655 contig_1 cds 930528 931673 - GCA012955505_01122 yfkAB radical SAM/CxCxxxxC motif protein YfkAB COG:COG0535, COG:DH, GO:0008152, GO:0051539, GO:1904047, SO:0001217, UniParc:UPI000054B9B9, UniRef:UniRef100_A0A7Z1N3W2, UniRef:UniRef50_B9E7Z7, UniRef:UniRef90_A0A7Z1N3W2 contig_1 cds 931893 932411 + GCA012955505_01123 yajL putative protein SH1084 COG:COG0693, COG:V, RefSeq:WP_011275387.1, SO:0001217, UniParc:UPI000054B9BB, UniRef:UniRef100_Q4L7I2, UniRef:UniRef50_P0A0K3, UniRef:UniRef90_Q4L7I2 contig_1 cds 932702 933514 + GCA012955505_01124 sgtB monofunctional peptidoglycan glycosyltransferase SgtB BlastRules:WP_000830377, COG:COG0744, COG:M, EC:2.4.-.-, EC:2.4.99.28, GO:0005886, GO:0008360, GO:0008955, GO:0009252, GO:0030288, GO:0071555, RefSeq:WP_016931357.1, SO:0001217, UniParc:UPI0002F68850, UniRef:UniRef100_UPI0002F68850, UniRef:UniRef50_Q93Q23, UniRef:UniRef90_Q4L7I0 contig_1 cds 933794 934240 + GCA012955505_01125 hypothetical protein PFAM:PF02631.22, PFAM:PF21981.2 contig_1 cds 934233 934547 + GCA012955505_01126 Transcriptional regulator RefSeq:WP_011275391.1, SO:0001217, UniParc:UPI000054B9BF, UniRef:UniRef100_A0A2A1K9Z4, UniRef:UniRef50_G5JJ30, UniRef:UniRef90_A0A380G0R1 contig_1 cds 934563 936035 + GCA012955505_01127 tagH Teichoic acid ABC transporter ATP-binding protein COG:COG1134, COG:G, SO:0001217, UniRef:UniRef50_Q2G2H3, UniRef:UniRef90_A0A2A1K7B8 contig_1 cds 936044 936538 + GCA012955505_01128 hypothetical protein SO:0001217, UniRef:UniRef50_UPI00265659B8, UniRef:UniRef90_UPI00265659B8 contig_1 cds 936725 937702 - GCA012955505_01129 ybcI Metal-dependent hydrolase COG:COG1988, COG:R, RefSeq:WP_016931354.1, SO:0001217, UniParc:UPI0002F84E7B, UniRef:UniRef100_A0AB38PDB0, UniRef:UniRef50_Q2G2V9, UniRef:UniRef90_A0A2A1K6D6 contig_1 cds 937853 938866 + GCA012955505_01130 mutY A/G-specific adenine glycosylase COG:COG1194, COG:L, EC:3.2.2.31, GO:0006284, GO:0019104, KEGG:K03575, SO:0001217, UniRef:UniRef50_A0A7U7JQ99, UniRef:UniRef90_A0A2K0A725 contig_1 cds 938981 939523 + GCA012955505_01131 ygaC Nucleoside triphosphate/diphosphate phosphatase COG:COG3557, COG:S, EC:3.6.1.15, EC:3.6.1.6, GO:0000287, GO:0017110, GO:0017111, KEGG:K07586, RefSeq:WP_011275396.1, SO:0001217, UniParc:UPI000054B9C4, UniRef:UniRef100_Q4L7H2, UniRef:UniRef50_Q2G2M8, UniRef:UniRef90_Q2G2M8 contig_1 cds 939688 941424 + GCA012955505_01132 mdlB ABC transporter ATP-binding protein COG:COG1132, COG:V, RefSeq:WP_011275397.1, SO:0001217, UniParc:UPI000054B9C5, UniRef:UniRef100_A0A2A1K8N1, UniRef:UniRef50_P71082, UniRef:UniRef90_A0A0S4MF40 contig_1 cds 941613 942707 - GCA012955505_01133 ygaE Aromatic acid exporter family protein COG:COG4129, COG:S, RefSeq:WP_011275398.1, SO:0001217, UniParc:UPI000054B9C6, UniRef:UniRef100_A0A2A1KA15, UniRef:UniRef50_Q2G2N1, UniRef:UniRef90_A0A2T4L2L0 contig_1 cds 942864 944153 - GCA012955505_01134 hemL2 glutamate-1-semialdehyde 2,1-aminomutase COG:COG0001, COG:H, EC:5.4.3.8, GO:0005737, GO:0006782, GO:0008483, GO:0030170, GO:0033014, GO:0042286, RefSeq:WP_011275399.1, SO:0001217, UniParc:UPI00016100B9, UniRef:UniRef100_Q4L7G9, UniRef:UniRef50_Q2G283, UniRef:UniRef90_Q2G283 contig_1 cds 944235 944534 + GCA012955505_01135 thioredoxin-dependent peroxiredoxin SO:0001217, UniRef:UniRef50_A0A7Z7R0H1 contig_1 cds 944559 945350 + GCA012955505_01136 NAD(P)-dependent oxidoreductase SO:0001217, UniRef:UniRef50_UPI00066D3011 contig_1 cds 945310 945540 + GCA012955505_01137 NAD(P)-dependent oxidoreductase SO:0001217, UniRef:UniRef50_UPI0028DD056A contig_1 cds 945634 946086 + GCA012955505_01138 perR peroxide-responsive transcriptional repressor PerR BlastRules:WP_000110011, BlastRules:WP_002858684, BlastRules:WP_002987920, BlastRules:WP_003223285, COG:COG0735, COG:P, GO:0000976, GO:0003700, GO:0005737, GO:0008270, GO:0045892, GO:1900376, RefSeq:WP_011275403.1, SO:0001217, UniParc:UPI000054B9CB, UniRef:UniRef100_Q4L7G4, UniRef:UniRef50_P71086, UniRef:UniRef90_Q4L7G4 contig_1 rRNA 946985 947099 + GCA012955505_01139 rrf 5S ribosomal RNA GO:0003735, GO:0005840, KEGG:K01985, RFAM:RF00001, SO:0000652 contig_1 tRNA 947110 947185 + GCA012955505_01140 trnV tRNA-Val(tac) SO:0000273 contig_1 tRNA 947206 947281 + GCA012955505_01141 trnT tRNA-Thr(tgt) SO:0000270 contig_1 tRNA 947290 947362 + GCA012955505_01142 trnK tRNA-Lys(ttt) SO:0000265 contig_1 tRNA 947372 947453 + GCA012955505_01143 trnL tRNA-Leu(tag) SO:0000264 contig_1 tRNA 947457 947531 + GCA012955505_01144 trnG tRNA-Gly(gcc) SO:0000260 contig_1 tRNA 947548 947636 + GCA012955505_01145 trnL tRNA-Leu(taa) SO:0000264 contig_1 tRNA 947648 947721 + GCA012955505_01146 trnR tRNA-Arg(acg) SO:0001036 contig_1 tRNA 947730 947803 + GCA012955505_01147 trnP tRNA-Pro(tgg) SO:0000268 contig_1 tRNA 947832 947907 + GCA012955505_01148 trnA tRNA-Ala(tgc) SO:0000254 contig_1 tRNA 947932 948005 + GCA012955505_01149 trnM tRNA-Met(cat) SO:0000266 contig_1 tRNA 948034 948107 + GCA012955505_01150 trnI tRNA-Ile2(cat) SO:0000263 contig_1 tRNA 948117 948206 + GCA012955505_01151 trnS tRNA-Ser(tga) SO:0000269 contig_1 tRNA 948216 948291 + GCA012955505_01152 trnD tRNA-Asp(gtc) SO:0000256 contig_1 tRNA 948327 948419 + GCA012955505_01153 trnS tRNA-Ser(tga) SO:0000269 contig_1 tRNA 948431 948504 + GCA012955505_01154 trnfM tRNA-fMet(cat) SO:0000266 contig_1 tRNA 948516 948591 + GCA012955505_01155 trnD tRNA-Asp(gtc) SO:0000256 contig_1 tRNA 948603 948675 + GCA012955505_01156 trnF tRNA-Phe(gaa) SO:0000267 contig_1 tRNA 948685 948760 + GCA012955505_01157 trnT tRNA-Thr(tgt) SO:0000270 contig_1 tRNA 948767 948850 + GCA012955505_01158 trnY tRNA-Tyr(gta) SO:0000272 contig_1 tRNA 948860 948933 + GCA012955505_01159 trnW tRNA-Trp(cca) SO:0000271 contig_1 tRNA 948936 949008 + GCA012955505_01160 trnH tRNA-His(gtg) SO:0000262 contig_1 tRNA 949023 949094 + GCA012955505_01161 trnQ tRNA-Gln(ttg) SO:0000261 contig_1 tRNA 949100 949173 + GCA012955505_01162 trnC tRNA-Cys(gca) SO:0000258 contig_1 tRNA 949182 949255 + GCA012955505_01163 trnG tRNA-Gly(tcc) SO:0000260 contig_1 tRNA 949270 949344 + GCA012955505_01164 trnG tRNA-Gly(tcc) SO:0000260 contig_1 tRNA 949359 949433 + GCA012955505_01165 trnG tRNA-Gly(tcc) SO:0000260 contig_1 tRNA 949448 949522 + GCA012955505_01166 trnG tRNA-Gly(tcc) SO:0000260 contig_1 tRNA 949537 949634 + GCA012955505_01167 tRNA-Xxx contig_1 cds 949749 949994 + GCA012955505_01168 Transposase for ISSha1 SO:0001217, UniRef:UniRef50_Q4L8F7, UniRef:UniRef90_Q4L8F7 contig_1 cds 950297 951247 + GCA012955505_01169 pfoR Phosphotransferase system EIIC domain-containing protein COG:COG3641, COG:T, KEGG:K07035, SO:0001217, UniRef:UniRef50_B9DMY0, UniRef:UniRef90_A0A2A1KAL7 contig_1 cds 951479 951841 + GCA012955505_01170 transporter substrate-binding domain-containing protein SO:0001217, UniRef:UniRef50_UPI0011774A38 contig_1 cds 952242 952895 + GCA012955505_01171 amino acid ABC transporter permease SO:0001217, UniRef:UniRef50_A0A2T0BKI8, UniRef:UniRef90_UPI000FF10BC6 contig_1 cds 952888 953610 + GCA012955505_01172 glnQ Amino acid ABC transporter ATP-binding protein COG:COG1126, COG:E, RefSeq:WP_016931345.1, SO:0001217, UniParc:UPI0002FE4E0A, UniRef:UniRef100_A0A2A1K6Z8, UniRef:UniRef50_W0QFA6, UniRef:UniRef90_A0A2A1K6Z8 contig_1 cds 953788 954915 + GCA012955505_01173 queG tRNA epoxyqueuosine(34) reductase QueG COG:COG1600, COG:J, EC:1.17.99.6, GO:0008033, GO:0008616, GO:0051539, GO:0052693, KEGG:K18979, RefSeq:WP_011275407.1, SO:0001217, UniParc:UPI000054B9CF, UniRef:UniRef100_A0A2A1K8G1, UniRef:UniRef50_P97030, UniRef:UniRef90_A0A2A1K8G1 contig_1 cds 954916 955386 + GCA012955505_01174 trmL tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL COG:COG0219, COG:J, EC:2.1.1.207, GO:0006400, GO:0008175, KEGG:K03216, RefSeq:WP_016931343.1, SO:0001217, UniParc:UPI0002E06D81, UniRef:UniRef100_A0A2A1K941, UniRef:UniRef50_A0A356K312, UniRef:UniRef90_A0A2A1K941 contig_1 cds 955558 955929 + GCA012955505_01175 hypothetical protein SO:0001217, UniRef:UniRef50_A0A380DWV9 contig_1 cds 956047 956196 + GCA012955505_01176 SAS053 family DNA gyrase inhibitor GO:0090729, RefSeq:WP_011275410.1, SO:0001217, UniParc:UPI000054B9D2, UniRef:UniRef100_A0A2J9WWA3, UniRef:UniRef50_G5JFE7, UniRef:UniRef90_A0A2J9WWA3 contig_1 cds 956371 956502 + GCA012955505_01177 hypothetical protein contig_1 cds 956529 956696 + GCA012955505_01178 (pseudo) DUF4013 domain-containing protein SO:0001217, UniRef:UniRef50_Q2FX93, UniRef:UniRef90_A0A2A1KBX8 contig_1 cds 956903 958288 + GCA012955505_01179 fumC class II fumarate hydratase COG:C, COG:COG0114, EC:4.2.1.2, GO:0004333, GO:0005737, GO:0006099, GO:0006106, GO:0006108, GO:0045239, KEGG:K01679, SO:0001217, UniRef:UniRef50_P64172, UniRef:UniRef90_Q4L7F5 contig_1 cds 958354 959178 - GCA012955505_01180 rluA Pseudouridine synthase COG:COG0564, COG:J, RefSeq:WP_011275413.1, SO:0001217, UniParc:UPI000054B9D5, UniRef:UniRef100_A0A2A1K8N9, UniRef:UniRef50_A0A239YUZ3, UniRef:UniRef90_A0A2K4DIV3 contig_1 cds 959328 960497 + GCA012955505_01181 comP histidine kinase COG:COG4585, COG:T, SO:0001217, UniRef:UniRef50_A0A380G577, UniRef:UniRef90_A0A2A1KC03 contig_1 cds 960520 961143 + GCA012955505_01182 citB DNA-binding response regulator COG:COG2197, COG:TK, RefSeq:WP_085050068.1, SO:0001217, UniParc:UPI000A100BFB, UniRef:UniRef100_UPI000A100BFB, UniRef:UniRef50_S2XG46, UniRef:UniRef90_A0A2A1KAM7 contig_1 cds 961408 961872 + GCA012955505_01183 xRE Transcriptional regulator COG:COG1476, COG:K, RefSeq:WP_011275416.1, SO:0001217, UniParc:UPI000054B9D8, UniRef:UniRef100_A0A2A1KA04, UniRef:UniRef50_Q2FX98, UniRef:UniRef90_A0A2A1KA04 contig_1 cds 962243 962647 + GCA012955505_01184 hypothetical protein contig_1 cds 962655 963014 + GCA012955505_01185 hypothetical protein contig_1 cds 963023 963319 + GCA012955505_01186 Membrane protein SO:0001217, UniRef:UniRef50_A0A380H1I7 contig_1 cds 963362 963706 + GCA012955505_01187 ylbF YlbF/YmcA family competence regulator COG:COG3679, COG:T, RefSeq:WP_011275418.1, SO:0001217, UniParc:UPI000054B9DA, UniRef:UniRef100_Q4L7E9, UniRef:UniRef50_Q2FXA0, UniRef:UniRef90_Q5HN91 contig_1 cds 963853 964704 + GCA012955505_01188 yhaO DNA repair exonuclease family protein YhaO SO:0001217, UniRef:UniRef50_A0A380EJG9 contig_1 cds 964758 965036 + GCA012955505_01189 Metallophosphoesterase SO:0001217, UniRef:UniRef50_A0A380FKL0 contig_1 cds 965026 966219 + GCA012955505_01190 AAA family ATPase SO:0001217, UniRef:UniRef50_UPI001067EB8F, UniRef:UniRef90_UPI0018DD9A96 contig_1 cds 966203 966628 + GCA012955505_01191 hypothetical protein contig_1 cds 966648 966785 + GCA012955505_01192 hypothetical protein contig_1 cds 967029 967682 + GCA012955505_01193 ATP-binding protein SO:0001217, UniRef:UniRef50_UPI000CA67957, UniRef:UniRef90_UPI000AFBCF78 contig_1 cds 967755 968003 + GCA012955505_01194 hypothetical protein contig_1 cds 967957 968523 + GCA012955505_01195 CMP-binding-factor 1 SO:0001217, UniRef:UniRef50_A0A8G2HX43 contig_1 cds 968687 969661 - GCA012955505_01196 surA peptidylprolyl isomerase COG:COG0760, COG:O, SO:0001217, UniRef:UniRef50_Q2G2S6, UniRef:UniRef90_A0A2A1K6Z3 contig_1 cds 969834 970391 - GCA012955505_01197 DUF3267 domain-containing protein RefSeq:WP_011275423.1, SO:0001217, UniParc:UPI000054B9DF, UniRef:UniRef100_A0A2A1K8P9, UniRef:UniRef50_Q2G2S9, UniRef:UniRef90_A0A2A1K8P9 contig_1 cds 970553 970927 - GCA012955505_01198 gvpP YtxH domain-containing protein COG:COG4980, COG:R, RefSeq:WP_011275424.1, SO:0001217, UniParc:UPI000054B9E0, UniRef:UniRef100_A0A2A1KC13, UniRef:UniRef50_A0A1S2MI30, UniRef:UniRef90_A0A2A1KC13 contig_1 cds 971070 971396 - GCA012955505_01199 hypothetical protein PFAM:PF01230.28 contig_1 cds 971565 972305 + GCA012955505_01200 rbbA ABC transporter ATP-binding protein COG:COG1131, COG:JV, RefSeq:WP_011275426.1, SO:0001217, UniParc:UPI000054B9E2, UniRef:UniRef100_A0A2A1KA14, UniRef:UniRef50_A0A0M9FN87, UniRef:UniRef90_A0A2A1KA14 contig_1 cds 972298 972498 + GCA012955505_01201 ABC transporter permease SO:0001217, UniRef:UniRef50_UPI000FF17C69 contig_1 cds 972540 973481 + GCA012955505_01202 ABC transporter permease KEGG:K25157, SO:0001217, UniRef:UniRef50_UPI000FECFDA5, UniRef:UniRef90_UPI001D144FFA contig_1 cds 973541 973777 - GCA012955505_01203 hypothetical protein contig_1 cds 974141 975175 + GCA012955505_01204 hemE uroporphyrinogen decarboxylase COG:COG0407, COG:H, EC:4.1.1.37, GO:0004853, GO:0005829, GO:0006779, GO:0006782, KEGG:K01599, RefSeq:WP_053023763.1, SO:0001217, UniParc:UPI00069D882F, UniRef:UniRef100_UPI00069D882F, UniRef:UniRef50_P32395, UniRef:UniRef90_Q4L7D8 contig_1 cds 975212 976135 + GCA012955505_01205 hemH ferrochelatase COG:COG0276, COG:H, EC:4.98.1.1, EC:4.99.1.9, GO:0004325, GO:0006779, KEGG:K01772, RefSeq:WP_011275430.1, SO:0001217, UniParc:UPI000054B9E6, UniRef:UniRef100_A0A2A1K9E1, UniRef:UniRef50_P32396, UniRef:UniRef90_A0A2A1K9E1 contig_1 cds 976154 977533 + GCA012955505_01206 hemY protoporphyrinogen oxidase COG:COG1232, COG:H, EC:1.3.3.4, GO:0004729, GO:0006779, SO:0001217, UniRef:UniRef50_Q2FXA5, UniRef:UniRef90_Q4L7D6 contig_1 cds 977633 977812 + GCA012955505_01207 hypothetical protein contig_1 cds 977760 978131 + GCA012955505_01208 ydeN (pseudo) Serine hydrolase family protein COG:COG3545, COG:R, SO:0001217, UniRef:UniRef50_Q2FXA7, UniRef:UniRef90_A0A7Z1MYV8 contig_1 ncRNA 978354 978459 + GCA012955505_01209 S774 Staphylococcus sRNA 774 RFAM:RF02896, SO:0000655 contig_1 tRNA 978440 978513 + GCA012955505_01210 trnfM tRNA-fMet(cat) SO:0000266 contig_1 tRNA 978529 978604 + GCA012955505_01211 trnD tRNA-Asp(gtc) SO:0000256 contig_1 tRNA 978616 978688 + GCA012955505_01212 trnF tRNA-Phe(gaa) SO:0000267 contig_1 tRNA 978702 978777 + GCA012955505_01213 trnH tRNA-His(gtg) SO:0000262 contig_1 tRNA 978792 978865 + GCA012955505_01214 trnG tRNA-Gly(tcc) SO:0000260 contig_1 tRNA 978875 978949 + GCA012955505_01215 trnN tRNA-Asn(gtt) SO:0000257 contig_1 tRNA 978951 979022 + GCA012955505_01216 trnE tRNA-Glu(ttc) SO:0000259 contig_1 tRNA 979082 979171 + GCA012955505_01217 trnS tRNA-Ser(gga) SO:0000269 contig_1 gap 979462 979471 . contig_1 cds 979599 980861 + GCA012955505_01218 menE o-succinylbenzoate--CoA ligase COG:COG0318, COG:I, EC:6.2.1.26, GO:0005524, GO:0008756, GO:0009234, SO:0001217, UniRef:UniRef50_Q2G2V3, UniRef:UniRef90_A0A7Z1MYC2 contig_1 cds 980863 981870 + GCA012955505_01219 menC o-succinylbenzoate synthase COG:COG4948, COG:MR, EC:4.2.1.113, GO:0009234, GO:0016829, RefSeq:WP_011275434.1, SO:0001217, UniParc:UPI000054B9EA, UniRef:UniRef100_A0A7Z1MYC7, UniRef:UniRef50_A0A0H2WWB5, UniRef:UniRef90_A0A7Z1MYC7 contig_1 cds 981867 982103 - GCA012955505_01220 yidD membrane protein insertion efficiency factor YidD COG:COG0759, COG:M, GO:0005886, KEGG:K08998, RefSeq:WP_011275435.1, SO:0001217, UniParc:UPI000054B9EB, UniRef:UniRef100_Q4L7D2, UniRef:UniRef50_P67307, UniRef:UniRef90_Q4L7D2 contig_1 cds 982170 982643 + GCA012955505_01221 ytkD RNA deprotection pyrophosphohydrolase COG:COG0494, COG:V, GO:0006139, GO:0017111, RefSeq:WP_011275436.1, SO:0001217, UniParc:UPI000054B9EC, UniRef:UniRef100_A0A2A1KA24, UniRef:UniRef50_A0A0D6XNS6, UniRef:UniRef90_A0A2A1KA24 contig_1 cds 982624 983394 + GCA012955505_01222 dAP2 Dipeptidyl aminopeptidase COG:COG1506, COG:E, RefSeq:WP_011275437.1, SO:0001217, UniParc:UPI000054B9ED, UniRef:UniRef100_A0A2A1K727, UniRef:UniRef50_Q2G2V6, UniRef:UniRef90_A0A2A1K727 contig_1 cds 983459 985051 - GCA012955505_01223 pckA phosphoenolpyruvate carboxykinase (ATP) COG:C, COG:COG1866, EC:4.1.1.49, GO:0004612, GO:0005524, GO:0005829, GO:0006094, GO:0046872, KEGG:K01610, RefSeq:WP_049394700.1, SO:0001217, UniParc:UPI00066C5294, UniRef:UniRef100_UPI00066C5294, UniRef:UniRef50_Q2G1W2, UniRef:UniRef90_Q4L7C9 contig_1 ncRNA-region 985217 985327 + SAM riboswitch aptamer (S box leader) RFAM:RF00162, SO:0000140 contig_1 cds 985443 986639 + GCA012955505_01224 metK methionine adenosyltransferase COG:COG0192, COG:H, EC:2.5.1.6, GO:0000287, GO:0004478, GO:0005524, GO:0005737, GO:0006556, GO:0006730, KEGG:K00789, RefSeq:WP_037538587.1, SO:0001217, UniParc:UPI00050E8CBF, UniRef:UniRef100_A0A2A1K969, UniRef:UniRef50_P72871, UniRef:UniRef90_Q2G1W4 contig_1 cds 986734 987642 + GCA012955505_01225 NERD domain-containing protein RefSeq:WP_049394701.1, SO:0001217, UniParc:UPI00066D9FC1, UniRef:UniRef100_UPI00066D9FC1, UniRef:UniRef50_Q2G1W5, UniRef:UniRef90_A0A5B2YUB9 contig_1 ncRNA 987705 987930 - GCA012955505_01226 tsr24 S. aureus tsr24 small RNA RFAM:RF02577, SO:0000655 contig_1 cds 987918 988199 + GCA012955505_01227 hypothetical protein contig_1 cds 988293 989129 + GCA012955505_01228 aRA1 Aldo/keto reductase COG:COG0656, COG:Q, RefSeq:WP_049394687.1, SO:0001217, UniParc:UPI00066CEBE5, UniRef:UniRef100_A0A2A1KC07, UniRef:UniRef50_B9DN15, UniRef:UniRef90_A0A7Z1SAJ1 contig_1 cds 989195 989548 - GCA012955505_01229 fluC1 Fluoride-specific ion channel FluC 1 COG:COG0239, COG:DP, GO:0005886, GO:0046872, GO:0062054, GO:0140114, RefSeq:WP_049394686.1, SO:0001217, UniParc:UPI00066E0BC3, UniRef:UniRef100_A0A2A1K712, UniRef:UniRef50_Q2FXE5, UniRef:UniRef90_Q4L7C4 contig_1 cds 989545 989757 - GCA012955505_01230 crcB CrcB family protein SO:0001217, UniRef:UniRef50_UPI001A954433 contig_1 cds 989902 990069 - GCA012955505_01231 hypothetical protein contig_1 cds 990337 991050 + GCA012955505_01232 talA transaldolase COG:COG0176, COG:G, EC:2.2.1.2, GO:0004801, GO:0006098, RefSeq:WP_011275446.1, SO:0001217, UniParc:UPI000054B9F6, UniRef:UniRef100_A0A2A1KAQ6, UniRef:UniRef50_A0A0D0SMT5, UniRef:UniRef90_A0A0D0SMT5 contig_1 cds 991593 991844 - GCA012955505_01233 comK competence protein ComK SO:0001217, UniRef:UniRef50_UPI001CD9209F, UniRef:UniRef90_UPI000A8BC6C6 contig_1 cds 992600 992821 + GCA012955505_01234 Staphylococcal protein RefSeq:WP_011275450.1, SO:0001217, UniParc:UPI000054B9FA, UniRef:UniRef100_A0A2A1K980, UniRef:UniRef50_Q2FXF3, UniRef:UniRef90_A0A2A1K980 contig_1 cds 993029 993880 + GCA012955505_01235 lytD Autolysin COG:COG4193, COG:G, RefSeq:WP_011275451.1, SO:0001217, UniParc:UPI000054B9FB, UniRef:UniRef100_A0A2A1K9G6, UniRef:UniRef50_Q2FXF4, UniRef:UniRef90_A0A2A1K9G6 contig_1 cds 994147 994392 + GCA012955505_01236 Transposase for ISSha1 SO:0001217, UniRef:UniRef50_Q4L8F7, UniRef:UniRef90_Q4L8F7 contig_1 cds 994800 995681 + GCA012955505_01237 FAD/NAD(P)-binding protein SO:0001217, UniRef:UniRef50_UPI00178CCC4E contig_1 cds 995686 996138 + GCA012955505_01238 Pyridine nucleotide-disulfide oxidoreductase family protein SO:0001217, UniRef:UniRef50_A0A380E4F7 contig_1 ncRNA-region 996292 996433 + FMN riboswitch aptamer (RFN element) RFAM:RF00050, SO:0000035 contig_1 cds 996573 997616 + GCA012955505_01239 ribD bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD COG:COG1985, COG:H, EC:1.1.1.193, EC:3.5.4.26, GO:0008703, GO:0008835, KEGG:K11752, RefSeq:WP_011275454.1, SO:0001217, UniParc:UPI000054B9FE, UniRef:UniRef100_A0A2A1K7X3, UniRef:UniRef50_B9DN32, UniRef:UniRef90_A0A2A1K7X3 contig_1 cds 997623 998255 + GCA012955505_01240 ribC riboflavin synthase COG:COG0307, COG:H, EC:2.5.1.9, KEGG:K00793, RefSeq:WP_011275455.1, SO:0001217, UniParc:UPI000054B9FF, UniRef:UniRef100_A0A2A1K771, UniRef:UniRef50_B9DN31, UniRef:UniRef90_A0A2A1K771 contig_1 cds 998271 999452 + GCA012955505_01241 ribBA Riboflavin biosynthesis protein RibBA COG:COG0807, COG:H, EC:3.5.4.25, EC:4.1.99.12, GO:0000287, GO:0003935, GO:0005525, GO:0005829, GO:0008270, GO:0008686, GO:0009231, GO:0030145, KEGG:K14652, RefSeq:WP_011275456.1, SO:0001217, UniParc:UPI000054BA00, UniRef:UniRef100_Q4L7B1, UniRef:UniRef50_Q4L7B1, UniRef:UniRef90_Q4L7B1 contig_1 cds 999464 999922 + GCA012955505_01242 ribE 6,7-dimethyl-8-ribityllumazine synthase COG:COG0054, COG:H, EC:2.5.1.78, GO:0000906, GO:0005829, GO:0009231, GO:0009349, KEGG:K00794, RefSeq:WP_011275457.1, SO:0001217, UniParc:UPI000054BA01, UniRef:UniRef100_Q4L7B0, UniRef:UniRef50_P66041, UniRef:UniRef90_Q5HNE4 contig_1 cds 999974 1000894 - GCA012955505_01243 putA proline dehydrogenase COG:COG0506, COG:E, SO:0001217, UniRef:UniRef50_A0A390ZXL9, UniRef:UniRef90_A0A2A1K9E2 contig_1 cds 1001159 1001959 + GCA012955505_01244 pldB Alpha/beta hydrolase COG:COG2267, COG:I, SO:0001217, UniRef:UniRef50_Q2FXG5, UniRef:UniRef90_A0A2A1KAS3 contig_1 cds 1002275 1002676 + GCA012955505_01245 Repressor of toxins Rot KEGG:K20338, RefSeq:WP_016931327.1, SO:0001217, UniParc:UPI0002E71E74, UniRef:UniRef100_A0A2A1K7F2, UniRef:UniRef50_Q9RFJ6, UniRef:UniRef90_Q4L7A7 contig_1 cds 1002816 1003376 - GCA012955505_01246 rmsH 16S rRNA (Cytosine(1402)-N(4))-methyltransferase COG:COG0275, COG:J, RefSeq:WP_011275461.1, SO:0001217, UniParc:UPI000054BA05, UniRef:UniRef100_A0A2A1K5H6, UniRef:UniRef50_Q2FXG9, UniRef:UniRef90_A0A2A1K5H6 contig_1 cds 1003373 1004332 - GCA012955505_01247 yhcC TIGR01212 family radical SAM protein COG:COG1242, COG:R, GO:0051536, GO:1904047, KEGG:K07139, RefSeq:WP_011275462.1, SO:0001217, UniParc:UPI000054BA06, UniRef:UniRef100_A0A2A1KAP2, UniRef:UniRef50_U1LL80, UniRef:UniRef90_A0A2A1KAP2 contig_1 cds 1004443 1005630 + GCA012955505_01248 araJ MFS transporter COG:COG2814, COG:G, RefSeq:WP_011275463.1, SO:0001217, UniParc:UPI000054BA07, UniRef:UniRef100_A0A7Z1MX52, UniRef:UniRef50_Q2FXH1, UniRef:UniRef90_A0A2A1K826 contig_1 ncRNA-region 1005697 1005882 + T-box leader RFAM:RF00230, SO:0000140 contig_1 cds 1005929 1008343 + GCA012955505_01249 leuS leucine--tRNA ligase COG:COG0495, COG:J, EC:6.1.1.4, GO:0000166, GO:0002161, GO:0004823, GO:0005524, GO:0005829, GO:0006429, KEGG:K01869, RefSeq:WP_011275464.1, SO:0001217, UniParc:UPI000054BA08, UniRef:UniRef100_Q4L7A3, UniRef:UniRef50_Q4L7A3, UniRef:UniRef90_Q4L7A3 contig_1 cds 1008364 1008675 + GCA012955505_01250 pspE Rhodanese-like domain-containing protein COG:COG0607, COG:P, RefSeq:WP_016931328.1, SO:0001217, UniParc:UPI0003042521, UniRef:UniRef100_A0A2A1K762, UniRef:UniRef50_A0A654B5B2, UniRef:UniRef90_A0A2A1K762 contig_1 cds 1008902 1010824 + GCA012955505_01251 SasC/FmtB family protein SO:0001217, UniRef:UniRef50_UPI0036F32C5F, UniRef:UniRef90_UPI00214D2E54 contig_1 cds 1011048 1013780 + GCA012955505_01252 (pseudo) YSIRK signal domain/LPXTG anchor domain surface protein SO:0001217, UniRef:UniRef50_A0A7Z1MX65, UniRef:UniRef90_A0A7Z1MX65 contig_1 cds 1014264 1014785 + GCA012955505_01253 (pseudo) DUF1542 domain-containing protein SO:0001217, UniRef:UniRef50_UPI0030DBCD6B, UniRef:UniRef90_UPI001D0D6A8C contig_1 cds 1015257 1015646 + GCA012955505_01254 hypothetical protein PFAM:PF04650.22 contig_1 cds 1015643 1017142 + GCA012955505_01255 SasC/FmtB family protein SO:0001217, UniRef:UniRef50_UPI000A121DF3 contig_1 cds 1017181 1019748 + GCA012955505_01256 DUF1542 domain-containing protein SO:0001217, UniRef:UniRef50_UPI0016423DBC contig_1 cds 1019787 1021028 - GCA012955505_01257 yhiN NAD(P)/FAD-dependent oxidoreductase COG:COG2081, COG:R, SO:0001217, UniRef:UniRef50_Q795R8, UniRef:UniRef90_A0A7Z1SDM2 contig_1 cds 1021106 1022854 + GCA012955505_01258 spoVB Polysaccharide biosynthesis protein C-terminal domain-containing protein COG:COG5841, COG:D, SO:0001217, UniRef:UniRef50_B9E7H2, UniRef:UniRef90_Q4L798 contig_1 cds 1022882 1023538 + GCA012955505_01259 rsuA Pseudouridine synthase COG:COG1187, COG:J, SO:0001217, UniRef:UniRef50_A0A2S6D0E1, UniRef:UniRef90_A0A7Z1N2H6 contig_1 cds 1023559 1023669 + GCA012955505_01260 hypothetical protein contig_1 cds 1023751 1024026 - GCA012955505_01261 hypothetical protein contig_1 cds 1024082 1024309 + GCA012955505_01262 hypothetical protein contig_1 cds 1024370 1025779 + GCA012955505_01263 pepV dipeptidase PepV COG:COG0624, COG:E, EC:3.4.13.-, GO:0006508, GO:0006526, GO:0008237, GO:0008270, GO:0008777, GO:0016805, RefSeq:WP_011275472.1, SO:0001217, UniParc:UPI000054BA10, UniRef:UniRef100_Q4L795, UniRef:UniRef50_Q2FXH9, UniRef:UniRef90_Q4L795 contig_1 cds 1025783 1025941 + GCA012955505_01264 hypothetical protein contig_1 cds 1025898 1026566 + GCA012955505_01265 D-amino-acid transaminase SO:0001217, UniRef:UniRef50_UPI002FFF5E31 contig_1 cds 1026990 1027781 + GCA012955505_01266 cotS Aminoglycoside phosphotransferase domain-containing protein COG:COG0510, COG:H, RefSeq:WP_041615131.1, SO:0001217, UniParc:UPI0002EE8452, UniRef:UniRef100_Q4L793, UniRef:UniRef50_I3ECD2, UniRef:UniRef90_Q4L793 contig_1 cds 1027796 1028389 + GCA012955505_01267 tRNA (guanine-N(7)-)-methyltransferase SO:0001217, UniRef:UniRef50_Q2FXI2 contig_1 cds 1028583 1028738 + GCA012955505_01268 Metal-dependent hydrolase SO:0001217, UniRef:UniRef50_W7CA11 contig_1 cds 1028902 1029399 + GCA012955505_01269 MBL fold metallo-hydrolase SO:0001217, UniRef:UniRef50_UPI001ABBA89F contig_1 cds 1029516 1029833 - GCA012955505_01270 PepSY domain-containing protein COG:COG5584, COG:S, RefSeq:WP_011275477.1, SO:0001217, UniParc:UPI000054BA14, UniRef:UniRef100_A0A2A1K7P9, UniRef:UniRef50_A0A2A1K7P9, UniRef:UniRef90_A0A2A1K7P9 contig_1 cds 1030022 1030996 + GCA012955505_01271 frvX Peptidase M28 COG:COG1363, COG:EG, SO:0001217, UniRef:UniRef50_A0A0D1GA35, UniRef:UniRef90_Q4L789 contig_1 cds 1031010 1031345 + GCA012955505_01272 trxA Thioredoxin COG:COG0526, COG:O, SO:0001217, UniRef:UniRef50_A0A380G846, UniRef:UniRef90_A0A2A1K5B0 contig_1 cds 1031320 1032138 + GCA012955505_01273 ytpQ UPF0354 protein SH1179 COG:COG4848, COG:R, SO:0001217, UniRef:UniRef50_Q2FXI7, UniRef:UniRef90_Q4L787 contig_1 cds 1032160 1032756 + GCA012955505_01274 ytpR YtpR family tRNA-binding protein COG:COG0073, COG:J, RefSeq:WP_016930816.1, SO:0001217, UniParc:UPI0002F2CDFA, UniRef:UniRef100_A0A2A1K965, UniRef:UniRef50_O34943, UniRef:UniRef90_Q4L786 contig_1 cds 1033156 1034496 + GCA012955505_01275 (pseudo) hypothetical protein SO:0001217, UniRef:UniRef50_UPI0008551E68, UniRef:UniRef90_UPI0008551E68 contig_1 cds 1034540 1036639 + GCA012955505_01276 ftsK DNA translocase FtsK SO:0001217, UniRef:UniRef50_UPI00024E581F contig_1 cds 1036660 1037973 + GCA012955505_01277 murC UDP-N-acetylmuramate--L-alanine ligase COG:COG0773, COG:M, EC:6.3.2.8, GO:0005524, GO:0005737, GO:0008360, GO:0008763, GO:0009252, GO:0051301, GO:0071555, KEGG:K01924, RefSeq:WP_011275483.1, SO:0001217, UniParc:UPI000054BA1A, UniRef:UniRef100_Q4L784, UniRef:UniRef50_Q2FXJ0, UniRef:UniRef90_Q4L784 contig_1 cds 1038055 1038561 + GCA012955505_01278 UPF0478 protein SH1183 COG:COG4768, COG:S, GO:0005886, RefSeq:WP_011275484.1, SO:0001217, UniParc:UPI000054BA1B, UniRef:UniRef100_Q4L783, UniRef:UniRef50_Q49YH0, UniRef:UniRef90_Q4L783 contig_1 cds 1038633 1039457 + GCA012955505_01279 ytxH YtxH domain-containing protein SO:0001217, UniRef:UniRef50_A0AAE5MY49, UniRef:UniRef90_UPI001F0A24EA contig_1 cds 1039432 1039575 + GCA012955505_01280 hypothetical protein contig_1 cds 1039517 1039894 + GCA012955505_01281 hypothetical protein contig_1 cds 1040158 1041249 + GCA012955505_01282 aroGA bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase COG:COG2876, COG:E, EC:2.5.1.54, EC:5.4.99.5, GO:0003824, GO:0009073, GO:0046417, KEGG:K13853, RefSeq:WP_011275486.1, SO:0001217, UniParc:UPI000054BA1D, UniRef:UniRef100_A0A2A1KAG6, UniRef:UniRef50_P39912, UniRef:UniRef90_A0A657ZU98 contig_1 cds 1041611 1042558 + GCA012955505_01283 ccpA catabolite control protein A COG:COG1609, COG:K, GO:0001228, GO:0003677, GO:0005975, GO:0006355, SO:0001217, UniRef:UniRef50_Q5HNH3, UniRef:UniRef90_A0A4Z1BI84 contig_1 cds 1042624 1043790 - GCA012955505_01284 acuC Acetoin utilization protein AcuC COG:COG0123, COG:Q, SO:0001217, UniRef:UniRef50_P64375, UniRef:UniRef90_Q4L779 contig_1 cds 1043805 1044437 - GCA012955505_01285 N-acetyltransferase EC:2.3.1.-, KEGG:K04766, RefSeq:WP_011275489.1, SO:0001217, UniParc:UPI000054BA20, UniRef:UniRef100_A0A2A1K6Y4, UniRef:UniRef50_P39065, UniRef:UniRef90_A0A2A1K6Y4 contig_1 cds 1044551 1044691 + GCA012955505_01286 hypothetical protein contig_1 cds 1044736 1046130 + GCA012955505_01287 acsA acetate--CoA ligase COG:COG0365, COG:I, EC:6.2.1.1, SO:0001217, UniRef:UniRef50_P39062, UniRef:UniRef90_Q4L777 contig_1 cds 1046464 1048131 + GCA012955505_01288 fhs formate--tetrahydrofolate ligase COG:COG2759, COG:F, EC:6.3.4.3, GO:0004329, GO:0005524, GO:0035999, RefSeq:WP_011275491.1, SO:0001217, UniParc:UPI000054BA22, UniRef:UniRef100_Q4L776, UniRef:UniRef50_Q5HF42, UniRef:UniRef90_Q4L776 contig_1 cds 1048274 1049050 - GCA012955505_01289 mrcB Transglycosylase COG:COG0744, COG:M, EC:2.4.99.28, KEGG:K12551, SO:0001217, UniRef:UniRef50_G5JFR8, UniRef:UniRef90_A0A2A1K7Z1 contig_1 cds 1049383 1050582 + GCA012955505_01290 tyrS tyrosine--tRNA ligase COG:COG0162, COG:J, EC:6.1.1.1, GO:0000166, GO:0003723, GO:0004831, GO:0005524, GO:0005829, GO:0006437, KEGG:K01866, SO:0001217, UniRef:UniRef50_Q88TV5, UniRef:UniRef90_Q4L774 contig_1 cds 1050633 1051022 + GCA012955505_01291 marR MarR family transcriptional regulator SO:0001217, UniRef:UniRef50_UPI001D011AAD, UniRef:UniRef90_UPI001D011AAD contig_1 cds 1051142 1052536 + GCA012955505_01292 araJ Quinolone resistance protein NorB COG:COG2814, COG:G, SO:0001217, UniRef:UniRef50_B9DM69, UniRef:UniRef90_Q4L772 contig_1 cds 1052616 1053893 - GCA012955505_01293 degQ Serine protease HtrA-like COG:COG0265, COG:O, RefSeq:WP_016930825.1, SO:0001217, UniParc:UPI00031E3767, UniRef:UniRef100_Q4L770, UniRef:UniRef50_A0A380HKD8, UniRef:UniRef90_A0A2A1KCX2 contig_1 cds 1054061 1054684 + GCA012955505_01294 plsC 1-acyl-sn-glycerol-3-phosphate acyltransferase COG:COG0204, COG:I, RefSeq:WP_011275497.1, SO:0001217, UniParc:UPI000054BA28, UniRef:UniRef100_A0A2A1K7W1, UniRef:UniRef50_A0A1D4JQG0, UniRef:UniRef90_A0A2A1K7W1 contig_1 cds 1054931 1056394 + GCA012955505_01295 ptsG2 PTS glucose transporter subunit IIBC COG:COG1264, COG:G, RefSeq:WP_046464762.1, SO:0001217, UniParc:UPI000623EA45, UniRef:UniRef100_A0A2A1K9L6, UniRef:UniRef50_A0A0U1KLN1, UniRef:UniRef90_A0A2A1K9L6 contig_1 cds 1056611 1056889 + GCA012955505_01296 hypothetical protein SO:0001217, UniRef:UniRef50_UPI001E3907CE contig_1 cds 1056841 1057701 + GCA012955505_01297 HAD hydrolase-like protein SO:0001217, UniRef:UniRef50_UPI002174DA56, UniRef:UniRef90_UPI0027E74C61 contig_1 cds 1057830 1059428 - GCA012955505_01298 serA phosphoglycerate dehydrogenase COG:COG1760, COG:E, EC:1.1.1.95, GO:0004617, GO:0006564, RefSeq:WP_037558120.1, SO:0001217, UniParc:UPI00044E543F, UniRef:UniRef100_UPI00044E543F, UniRef:UniRef50_B9DN70, UniRef:UniRef90_A0A2A1KBI4 contig_1 cds 1059418 1060578 - GCA012955505_01299 pucG Alanine--glyoxylate aminotransferase family protein COG:COG0075, COG:EF, RefSeq:WP_037558122.1, SO:0001217, UniParc:UPI0004469755, UniRef:UniRef100_UPI0004469755, UniRef:UniRef50_Q2FXK2, UniRef:UniRef90_A0A2A1KAX8 contig_1 cds 1060694 1061134 - GCA012955505_01300 osmC Peroxiredoxin COG:COG1764, COG:V, RefSeq:WP_011275502.1, SO:0001217, UniParc:UPI000054BA2D, UniRef:UniRef100_A0A2A1K802, UniRef:UniRef50_B9DN81, UniRef:UniRef90_A0A2A1K802 contig_1 cds 1061213 1061959 + GCA012955505_01301 ugpQ Glycerophosphodiester phosphodiesterase COG:COG0584, COG:I, EC:3.1.4.46, KEGG:K01126, SO:0001217, UniRef:UniRef50_A0A380FZJ1, UniRef:UniRef90_A0A2A1K9D9 contig_1 cds 1062033 1062635 - GCA012955505_01302 rpsD 30S ribosomal protein S4 COG:COG0522, COG:J, GO:0003735, GO:0006412, GO:0015935, GO:0019843, GO:0042274, KEGG:K02986, RefSeq:WP_011275505.1, SO:0001217, UniParc:UPI000054BA30, UniRef:UniRef100_Q4L760, UniRef:UniRef50_P21466, UniRef:UniRef90_Q2FXK6 contig_1 cds 1062860 1063327 - GCA012955505_01303 msrC Free methionine-(R)-sulfoxide reductase COG:COG1956, COG:VT, RefSeq:WP_011275506.1, SO:0001217, UniParc:UPI000054BA31, UniRef:UniRef100_A0A2A1KA99, UniRef:UniRef50_A0A3B8UAD7, UniRef:UniRef90_A0A2A1KA99 contig_1 cds 1063458 1065152 + GCA012955505_01304 ezrA septation ring formation regulator EzrA COG:COG4477, COG:D, KEGG:K06286, RefSeq:WP_011275507.1, SO:0001217, UniParc:UPI000054BA32, UniRef:UniRef100_A0A2A1KCY2, UniRef:UniRef50_Q5HNI8, UniRef:UniRef90_A0A2A1KCY2 contig_1 cds 1065528 1066664 + GCA012955505_01305 nifS Aminotransferase COG:COG1104, COG:E, EC:2.8.1.7, KEGG:K04487, RefSeq:WP_011275508.1, SO:0001217, UniParc:UPI000054BA33, UniRef:UniRef100_A0A2A1K7X1, UniRef:UniRef50_A0A0D6HH30, UniRef:UniRef90_A0A2A1K7X1 contig_1 cds 1066665 1067888 + GCA012955505_01306 thiI putative tRNA sulfurtransferase COG:COG0301, COG:HJ, EC:2.8.1.4, GO:0000049, GO:0002937, GO:0004810, GO:0005524, GO:0005829, GO:0009228, GO:0009229, GO:0052837, GO:0140741, KEGG:K03151, RefSeq:WP_011275509.1, SO:0001217, UniParc:UPI000054BA34, UniRef:UniRef100_Q4L756, UniRef:UniRef50_Q4L756, UniRef:UniRef90_Q4L756 contig_1 cds 1067930 1068637 + GCA012955505_01307 putative membrane transporter protein SO:0001217, UniRef:UniRef50_A0A239TZL2 contig_1 cds 1068699 1069193 + GCA012955505_01308 tpx thiol peroxidase COG:COG2077, COG:O, EC:1.11.1.-, EC:1.11.1.24, GO:0008379, GO:0016684, KEGG:K11065, RefSeq:WP_011275511.1, SO:0001217, UniParc:UPI000054BA36, UniRef:UniRef100_Q4L754, UniRef:UniRef50_Q49YE4, UniRef:UniRef90_Q4L754 contig_1 cds 1069326 1070273 + GCA012955505_01309 ytxK Adenine-specific methyltransferase COG:COG0827, COG:L, RefSeq:WP_011275512.1, SO:0001217, UniParc:UPI000054BA37, UniRef:UniRef100_A0A2A1KAY8, UniRef:UniRef50_B9DN82, UniRef:UniRef90_A0A380G0S6 contig_1 cds 1070355 1071551 + GCA012955505_01310 ackA Acetate kinase COG:C, COG:COG0282, EC:2.7.2.1, GO:0000287, GO:0005524, GO:0005737, GO:0006083, GO:0006085, GO:0008776, KEGG:K00925, RefSeq:WP_011275513.1, SO:0001217, UniParc:UPI000054BA38, UniRef:UniRef100_Q4L752, UniRef:UniRef50_O52594, UniRef:UniRef90_Q4L752 contig_1 cds 1071700 1072197 - GCA012955505_01311 uspA Putative universal stress protein SH1215 COG:COG0589, COG:T, GO:0005737, RefSeq:WP_011275514.1, SO:0001217, UniParc:UPI000054BA39, UniRef:UniRef100_Q4L751, UniRef:UniRef50_Q2FXL6, UniRef:UniRef90_Q4L751 contig_1 cds 1072279 1073400 + GCA012955505_01312 ald alanine dehydrogenase COG:COG0686, COG:E, EC:1.4.1.1, GO:0000166, GO:0000286, GO:0005829, GO:0005886, GO:0006524, GO:0042853, KEGG:K00259, RefSeq:WP_011275515.1, SO:0001217, UniParc:UPI000054BA3A, UniRef:UniRef100_Q4L750, UniRef:UniRef50_P17556, UniRef:UniRef90_Q4L750 contig_1 cds 1073474 1074529 - GCA012955505_01313 pepP putative peptidase SH1217 COG:COG0006, COG:E, EC:3.4.-.-, GO:0016787, GO:0046872, RefSeq:WP_011275516.1, SO:0001217, UniParc:UPI000054BA3B, UniRef:UniRef100_Q4L749, UniRef:UniRef50_Q7A552, UniRef:UniRef90_Q4L749 contig_1 cds 1074684 1075373 + GCA012955505_01314 ulaG metal-dependent hydrolase COG:COG2220, COG:G, GO:0016787, RefSeq:WP_011275517.1, SO:0001217, UniParc:UPI000054BA3C, UniRef:UniRef100_Q4L748, UniRef:UniRef50_Q2FXM0, UniRef:UniRef90_Q5HNJ8 contig_1 cds 1075497 1075901 - GCA012955505_01315 uspA Universal stress protein COG:COG0589, COG:T, SO:0001217, UniRef:UniRef50_Q2FXM1, UniRef:UniRef90_A0A2A1K7Y1 contig_1 cds 1075969 1077273 + GCA012955505_01316 ytoI CBS domain-containing protein COG:COG4109, COG:K, RefSeq:WP_011275519.1, SO:0001217, UniParc:UPI000054BA3E, UniRef:UniRef100_A0A7Z1MYJ3, UniRef:UniRef50_A0A7U7JV62, UniRef:UniRef90_A0A2A1K9N9 contig_1 cds 1077311 1078249 + GCA012955505_01317 nrnA Bifunctional oligoribonuclease/PAP phosphatase NrnA COG:COG0618, COG:FT, EC:3.1.13.3, EC:3.1.3.7, KEGG:K06881, RefSeq:WP_016930828.1, SO:0001217, UniParc:UPI00030BB767, UniRef:UniRef100_UPI00030BB767, UniRef:UniRef50_A0A7U7JV59, UniRef:UniRef90_A0A7Z1MYK8 contig_1 cds 1078271 1078636 + GCA012955505_01318 Polymerase/histidinol phosphatase N-terminal domain-containing protein SO:0001217, UniRef:UniRef50_A0A317YPK8 contig_1 cds 1078914 1079693 + GCA012955505_01319 (pseudo) DNA polymerase III subunit alpha SO:0001217, UniRef:UniRef50_A0A380EKE0, UniRef:UniRef90_UPI000FF31097 contig_1 cds 1079867 1080445 + GCA012955505_01320 (pseudo) DNA-directed DNA polymerase SO:0001217, UniRef:UniRef50_A0A380E526, UniRef:UniRef90_A0A380DU71 contig_1 cds 1080504 1080746 + GCA012955505_01321 OB-fold nucleic acid binding domain-containing protein SO:0001217, UniRef:UniRef50_UPI0030FC98B7 contig_1 cds 1081031 1082260 + GCA012955505_01322 sfcA NADP-dependent malic enzyme COG:C, COG:COG0281, RefSeq:WP_033080156.1, SO:0001217, UniParc:UPI0004A8D091, UniRef:UniRef100_A0A7Z1MXS2, UniRef:UniRef50_A0A2U3KL65, UniRef:UniRef90_A0A380G0T4 contig_1 cds 1082320 1083126 + GCA012955505_01323 accD acetyl-CoA carboxylase, carboxyltransferase subunit beta COG:COG0777, COG:I, EC:2.1.3.15, EC:6.4.1.2, GO:0003989, GO:0005524, GO:0006633, GO:0008270, GO:0009317, GO:0016743, GO:2001295, SO:0001217, UniRef:UniRef50_C0SP93, UniRef:UniRef90_Q4L742 contig_1 cds 1083098 1084045 + GCA012955505_01324 accA acetyl-CoA carboxylase carboxyltransferase subunit alpha COG:COG0825, COG:I, EC:2.1.3.15, EC:6.4.1.2, GO:0003989, GO:0005524, GO:0006633, GO:0009317, GO:0016743, GO:2001295, SO:0001217, UniRef:UniRef50_Q9HXZ2, UniRef:UniRef90_Q4L741 contig_1 cds 1084304 1085272 + GCA012955505_01325 pfkA 6-phosphofructokinase COG:COG0205, COG:G, EC:2.7.1.11, GO:0005524, GO:0006002, GO:0006096, KEGG:K00850, RefSeq:WP_033080157.1, SO:0001217, UniParc:UPI0003046BDE, UniRef:UniRef100_A0A2A1KA38, UniRef:UniRef50_Q8CS68, UniRef:UniRef90_A0A2A1KA38 contig_1 cds 1085291 1087051 + GCA012955505_01326 pyk pyruvate kinase COG:COG3848, COG:T, EC:2.7.1.40, GO:0000287, GO:0004743, GO:0005524, GO:0006096, GO:0016301, GO:0030955, KEGG:K00873, SO:0001217, UniRef:UniRef50_Q02499, UniRef:UniRef90_Q5HNK7 contig_1 cds 1087327 1088274 + GCA012955505_01327 dusA tRNA-dihydrouridine synthase COG:COG0042, COG:J, SO:0001217, UniRef:UniRef50_O31546, UniRef:UniRef90_A0A2A1KD03 contig_1 cds 1088490 1089731 - GCA012955505_01328 ansP Amino acid permease COG:COG1113, COG:E, SO:0001217, UniRef:UniRef50_Q2FXN2, UniRef:UniRef90_A0A2A1K7Z2 contig_1 cds 1090142 1091140 + GCA012955505_01329 gltA citrate synthase COG:C, COG:COG0372, EC:2.3.3.5, KEGG:K01659, SO:0001217, UniRef:UniRef50_P39120, UniRef:UniRef90_A0A2A1K9Q2 contig_1 cds 1091184 1092452 + GCA012955505_01330 icd NADP-dependent isocitrate dehydrogenase COG:C, COG:COG0538, EC:1.1.1.42, GO:0000287, GO:0004450, GO:0006097, GO:0006099, GO:0051287, RefSeq:WP_011275530.1, SO:0001217, UniParc:UPI000054BA49, UniRef:UniRef100_A0A2A1KCZ9, UniRef:UniRef50_Q5HNL1, UniRef:UniRef90_Q8NW61 contig_1 cds 1092679 1093389 + GCA012955505_01331 ompR Alkaline phosphatase synthesis transcriptional regulatory protein PhoP COG:COG0745, COG:TK, RefSeq:WP_011275531.1, SO:0001217, UniParc:UPI000054BA4A, UniRef:UniRef100_A0A7Z1MYD2, UniRef:UniRef50_K1LRI2, UniRef:UniRef90_Q5HNL2 contig_1 cds 1093389 1093547 + GCA012955505_01332 hypothetical protein SO:0001217, UniRef:UniRef50_UPI0002087E77 contig_1 cds 1093585 1095042 + GCA012955505_01333 pnpS two-component system histidine kinase PnpS COG:COG5002, COG:T, GO:0000155, GO:0016310, SO:0001217, UniRef:UniRef50_A0A380G833, UniRef:UniRef90_A0A2K0A7E8 contig_1 cds 1095211 1097916 + GCA012955505_01334 polA DNA polymerase I COG:COG0749, COG:L, EC:2.7.7.7, GO:0003676, GO:0003677, GO:0003887, GO:0006261, GO:0008408, SO:0001217, UniRef:UniRef50_K9B5S8, UniRef:UniRef90_A0A2A1K829 contig_1 cds 1097932 1098069 + GCA012955505_01335 Formamidopyrimidine-DNA glycosylase SO:0001217, UniRef:UniRef50_A0A380E2T2 contig_1 cds 1098153 1098758 + GCA012955505_01336 Fpg/Nei family DNA glycosylase SO:0001217, UniRef:UniRef50_UPI0007D6D0A8 contig_1 cds 1098775 1099383 + GCA012955505_01337 coaE dephospho-CoA kinase COG:COG0237, COG:H, EC:2.7.1.24, GO:0004140, GO:0005524, GO:0005737, GO:0015937, KEGG:K00859, RefSeq:WP_011275535.1, SO:0001217, UniParc:UPI000054BA4E, UniRef:UniRef100_Q4L730, UniRef:UniRef50_Q49YB9, UniRef:UniRef90_Q4L730 contig_1 cds 1099545 1100570 + GCA012955505_01338 gap type I glyceraldehyde-3-phosphate dehydrogenase COG:COG0057, COG:G, GO:0006006, GO:0016620, GO:0050661, GO:0051287, RefSeq:WP_011275537.1, SO:0001217, UniParc:UPI000054BA50, UniRef:UniRef100_A0A2A1K9T8, UniRef:UniRef50_P9WN83, UniRef:UniRef90_A0A2A1K9T8 contig_1 cds 1100768 1101238 + GCA012955505_01339 nrdR transcriptional regulator NrdR COG:COG1327, COG:K, GO:0003677, GO:0005524, GO:0006355, GO:0008270, GO:0045892, GO:0140110, RefSeq:WP_011275538.1, SO:0001217, UniParc:UPI000054BA51, UniRef:UniRef100_Q4L727, UniRef:UniRef50_Q5M5X8, UniRef:UniRef90_Q2FXP3 contig_1 cds 1101239 1101826 + GCA012955505_01340 hypothetical protein contig_1 cds 1101832 1102617 + GCA012955505_01341 dnaD DnaD domain protein SO:0001217, UniRef:UniRef50_UPI000BE004A9 contig_1 cds 1102618 1103538 + GCA012955505_01342 dnaI primosomal protein DnaI COG:COG1484, COG:L, RefSeq:WP_011275540.1, SO:0001217, UniParc:UPI000054BA53, UniRef:UniRef100_A0A2A1K4C2, UniRef:UniRef50_Q2FXP5, UniRef:UniRef90_A0A2A1K4C2 contig_1 cds 1103859 1105775 + GCA012955505_01343 thrS threonine--tRNA ligase COG:COG0441, COG:J, EC:6.1.1.3, GO:0000049, GO:0004829, GO:0005524, GO:0005737, GO:0006435, GO:0016740, GO:0046872, KEGG:K01868, SO:0001217, UniRef:UniRef50_P18255, UniRef:UniRef90_B9DNC9 contig_1 ncRNA-region 1105825 1106000 + Lysine riboswitch aptamer RFAM:RF00168, SO:0000035 contig_1 cds 1106160 1107311 + GCA012955505_01344 Lysine-specific permease SO:0001217, UniRef:UniRef50_A0A023DIL3, UniRef:UniRef90_A0A380FHN7 contig_1 cds 1107308 1107658 + GCA012955505_01345 (pseudo) amino acid permease SO:0001217, UniRef:UniRef50_A0A380DV07, UniRef:UniRef90_UPI000357C1EA contig_1 ncRNA-region 1107722 1107849 + Ribosomal protein L20 leader RFAM:RF00558, SO:0000140 contig_1 cds 1107806 1108399 + GCA012955505_01346 infC translation initiation factor IF-3 GO:0003743, GO:0006413, SO:0001217, UniRef:UniRef50_B9DNC6, UniRef:UniRef90_Q4L721 contig_1 cds 1108427 1108627 + GCA012955505_01347 rpmI 50S ribosomal protein L35 COG:COG0291, COG:J, GO:0003735, GO:0005840, GO:0006412, GO:0022625, KEGG:K02916, RefSeq:WP_002448990.1, SO:0001217, UniParc:UPI000054BA58, UniRef:UniRef100_Q4L720, UniRef:UniRef50_P55874, UniRef:UniRef90_Q4L720 contig_1 cds 1108682 1109038 + GCA012955505_01348 rplT 50S ribosomal protein L20 COG:COG0292, COG:J, GO:0000027, GO:0000315, GO:0003735, GO:0005840, GO:0006412, GO:0019843, GO:0022625, GO:1990904, RefSeq:WP_011275545.1, SO:0001217, UniParc:UPI000054BA59, UniRef:UniRef100_Q4L719, UniRef:UniRef50_P13070, UniRef:UniRef90_Q49YB0 contig_1 cds 1109189 1109728 + GCA012955505_01349 ymaB DNA mismatch repair protein MutT COG:COG4112, COG:R, SO:0001217, UniRef:UniRef50_Q2FXQ3, UniRef:UniRef90_A0A2A1K4D4 contig_1 cds 1109682 1110221 + GCA012955505_01350 (pseudo) Tetratricopeptide repeat protein SO:0001217, UniRef:UniRef50_Q5HNM7, UniRef:UniRef90_A0A5B2YVV1 contig_1 cds 1110166 1110456 + GCA012955505_01351 hypothetical protein contig_1 cds 1110548 1111855 + GCA012955505_01352 tig trigger factor COG:COG0544, COG:O, EC:5.2.1.8, GO:0003755, GO:0005737, GO:0005854, GO:0015031, GO:0043022, GO:0043335, GO:0044183, GO:0051082, GO:0051083, GO:0051301, GO:0061077, GO:0140839, GO:0140840, SO:0001217, UniRef:UniRef50_P80698, UniRef:UniRef90_Q4L716 contig_1 cds 1112013 1113275 + GCA012955505_01353 clpX ATP-dependent Clp protease ATP-binding subunit ClpX COG:COG1219, COG:O, GO:0005524, GO:0008270, GO:0009376, GO:0016887, GO:0046983, GO:0051082, GO:0051301, GO:0051603, GO:0140662, RefSeq:WP_016930840.1, SO:0001217, UniParc:UPI0002EC9618, UniRef:UniRef100_UPI0002EC9618, UniRef:UniRef50_Q2FXQ7, UniRef:UniRef90_Q2FXQ7 contig_1 cds 1113500 1114051 + GCA012955505_01354 yihA ribosome biogenesis GTP-binding protein YihA/YsxC COG:COG0218, COG:D, GO:0000917, GO:0003924, GO:0005525, GO:0005737, GO:0005829, GO:0042254, GO:0043022, GO:0046872, SO:0001217, UniRef:UniRef50_Q2FXQ8, UniRef:UniRef90_Q4L712 contig_1 cds 1114222 1115568 + GCA012955505_01355 hemA glutamyl-tRNA reductase COG:COG0373, COG:H, EC:1.2.1.70, GO:0006782, GO:0008883, GO:0050661, KEGG:K02492, RefSeq:WP_016930841.1, SO:0001217, UniParc:UPI0002E3F952, UniRef:UniRef100_A0A7T8V0Z0, UniRef:UniRef50_Q65GJ9, UniRef:UniRef90_Q4L711 contig_1 cds 1115590 1116402 + GCA012955505_01356 hemA HemA concentration negative effector COG:COG0755, COG:O, KEGG:K02497, SO:0001217, UniRef:UniRef50_Q2FXR0, UniRef:UniRef90_Q4L710 contig_1 cds 1116433 1116906 + GCA012955505_01357 Hydroxymethylbilane synthase SO:0001217, UniRef:UniRef50_W7AVS4 contig_1 cds 1116939 1117349 + GCA012955505_01358 hydroxymethylbilane synthase SO:0001217, UniRef:UniRef50_A0A380FIN0 contig_1 cds 1117376 1118056 + GCA012955505_01359 hemD Uroporphyrinogen-III synthase COG:COG1587, COG:H, RefSeq:WP_011275556.1, SO:0001217, UniParc:UPI000054BA64, UniRef:UniRef100_A0A2A1KDN3, UniRef:UniRef50_Q5HNN4, UniRef:UniRef90_A0A2A1KDN3 contig_1 cds 1118046 1119020 + GCA012955505_01360 hemB porphobilinogen synthase COG:COG0113, COG:H, EC:4.2.1.24, GO:0003824, GO:0004655, GO:0005829, GO:0006782, GO:0008270, GO:0033014, GO:0046872, KEGG:K01698, RefSeq:WP_011275557.1, SO:0001217, UniParc:UPI000054BA65, UniRef:UniRef100_A0A2A1KAZ2, UniRef:UniRef50_Q2FXR3, UniRef:UniRef90_Q2FXR3 contig_1 cds 1119043 1120326 + GCA012955505_01361 hemL glutamate-1-semialdehyde 2,1-aminomutase COG:COG0001, COG:H, EC:5.4.3.8, GO:0005737, GO:0006782, GO:0008483, GO:0030170, GO:0033014, GO:0042286, RefSeq:WP_011275558.1, SO:0001217, UniParc:UPI000054BA66, UniRef:UniRef100_Q4L706, UniRef:UniRef50_P30949, UniRef:UniRef90_Q4L706 contig_1 cds 1120407 1120706 + GCA012955505_01362 Abrb SO:0001217, UniRef:UniRef50_A0A380EIP9 contig_1 cds 1120663 1121442 + GCA012955505_01363 abrB (pseudo) Aminopeptidase COG:COG3180, COG:R, KEGG:K07120, SO:0001217, UniRef:UniRef50_Q2FXR6, UniRef:UniRef90_Q4L705 contig_1 cds 1121569 1122123 - GCA012955505_01364 tag DNA-3-methyladenine glycosylase COG:COG2818, COG:L, EC:3.2.2.20, KEGG:K01246, RefSeq:WP_011275560.1, SO:0001217, UniParc:UPI000054BA68, UniRef:UniRef100_A0A2A1K8P6, UniRef:UniRef50_Q2FXR7, UniRef:UniRef90_A0A2A1K8P6 contig_1 ncRNA-region 1122180 1122398 + T-box leader RFAM:RF00230, SO:0000140 contig_1 cds 1122442 1125072 + GCA012955505_01365 valine--tRNA ligase EC:6.1.1.9, GO:0000166, GO:0004812, GO:0004832, GO:0005524, GO:0006438, KEGG:K01873, RefSeq:WP_037569934.1, SO:0001217, UniParc:UPI0004A97E42, UniRef:UniRef100_UPI0004A97E42, UniRef:UniRef50_P11931, UniRef:UniRef90_A0A2K0A7G6 contig_1 cds 1125084 1126106 + GCA012955505_01366 folC tetrahydrofolate synthase COG:COG0285, COG:H, SO:0001217, UniRef:UniRef50_Q2FXR9, UniRef:UniRef90_A0A2A1KC88 contig_1 cds 1126599 1127012 + GCA012955505_01367 (pseudo) Prepilin peptidase A24 N-terminal domain-containing protein SO:0001217, UniRef:UniRef50_Q4L701, UniRef:UniRef90_Q4L701 contig_1 cds 1127043 1127714 + GCA012955505_01368 radC DNA repair protein RadC COG:COG2003, COG:L, GO:0003677, GO:0006281, GO:0006508, GO:0008237, GO:0046872, SO:0001217, UniRef:UniRef50_P31337, UniRef:UniRef90_Q4L700 contig_1 cds 1127784 1128065 + GCA012955505_01369 MW1603 protein RefSeq:WP_011275565.1, SO:0001217, UniParc:UPI000054BA6D, UniRef:UniRef100_A0A2A1K8K4, UniRef:UniRef50_A0A2A1K8K4, UniRef:UniRef90_A0A2A1K8K4 contig_1 cds 1128121 1128300 - GCA012955505_01370 Colicin V production protein RefSeq:WP_011275566.1, SO:0001217, UniParc:UPI000054BA6E, UniRef:UniRef100_A0A2A1KDM3, UniRef:UniRef50_A0A7X9ZL45, UniRef:UniRef90_A0A2A1KDM3 contig_1 cds 1128590 1128925 + GCA012955505_01371 DUF4930 domain-containing protein SO:0001217, UniRef:UniRef50_UPI00115A496F contig_1 cds 1129003 1129125 + GCA012955505_01372 hypothetical protein SO:0001217, UniRef:UniRef50_A0A2J8BDS6, UniRef:UniRef90_A0A2J8BDS6 contig_1 cds 1129392 1129931 + GCA012955505_01373 mreC rod shape-determining protein MreC SO:0001217, UniRef:UniRef50_UPI000C6D871F contig_1 cds 1129931 1130392 + GCA012955505_01374 mreD rod shape-determining protein MreD GO:0008360, GO:0016020, SO:0001217, UniRef:UniRef50_A0A2A1KA19, UniRef:UniRef90_A0A2A1KA19 contig_1 ncRNA-region 1130471 1130548 + Ribosomal protein L21 leader RFAM:RF00559, SO:0000140 contig_1 cds 1130562 1130870 + GCA012955505_01375 rplU 50S ribosomal protein L21 COG:COG0261, COG:J, GO:0003723, GO:0003735, GO:0005737, GO:0005840, GO:0006412, GO:0019843, GO:1990904, KEGG:K02888, RefSeq:WP_011275571.1, SO:0001217, UniParc:UPI000054BA73, UniRef:UniRef100_Q4L6Z3, UniRef:UniRef50_Q2FXS8, UniRef:UniRef90_Q2FXS8 contig_1 cds 1130874 1131194 + GCA012955505_01376 ysxB Ribosomal processing cysteine protease Prp COG:COG2868, COG:S, KEGG:K07584, RefSeq:WP_011275572.1, SO:0001217, UniParc:UPI000054BA74, UniRef:UniRef100_A0A2A1KBM3, UniRef:UniRef50_P26942, UniRef:UniRef90_A0A380FZ65 contig_1 cds 1131206 1131490 + GCA012955505_01377 rpmA 50S ribosomal protein L27 COG:COG0211, COG:J, GO:0000315, GO:0003735, GO:0006412, GO:0022625, KEGG:K02899, RefSeq:WP_011275573.1, SO:0001217, UniParc:UPI000054BA75, UniRef:UniRef100_Q4L6Z1, UniRef:UniRef50_Q2FXT0, UniRef:UniRef90_Q2FXT0 contig_1 cds 1131643 1132935 + GCA012955505_01378 obgE GTPase ObgE COG:COG0536, COG:DL, EC:3.6.5.-, GO:0000287, GO:0003924, GO:0005525, GO:0005737, GO:0042254, RefSeq:WP_011275575.1, SO:0001217, UniParc:UPI000054BA77, UniRef:UniRef100_Q4L6Y9, UniRef:UniRef50_P20964, UniRef:UniRef90_Q2FXT1 contig_1 cds 1132947 1133402 + GCA012955505_01379 pheB ACT domain-containing protein COG:COG4492, COG:R, EC:5.4.99.5, KEGG:K06209, RefSeq:WP_011275576.1, SO:0001217, UniParc:UPI000054BA78, UniRef:UniRef100_Q4L6Y8, UniRef:UniRef50_Q2FXT2, UniRef:UniRef90_Q4L6Y8 contig_1 cds 1133415 1134020 + GCA012955505_01380 ruvA Holliday junction branch migration protein RuvA COG:COG0632, COG:L, EC:3.6.4.12, GO:0000400, GO:0003678, GO:0005524, GO:0005737, GO:0006281, GO:0006310, GO:0009378, GO:0009379, GO:0036121, GO:0048476, GO:0061749, GO:1990518, RefSeq:WP_011275577.1, SO:0001217, UniParc:UPI000054BA79, UniRef:UniRef100_Q4L6Y7, UniRef:UniRef50_Q2FXT3, UniRef:UniRef90_Q4L6Y7 contig_1 cds 1134075 1135070 + GCA012955505_01381 ruvB Holliday junction branch migration DNA helicase RuvB COG:COG2255, COG:L, EC:3.6.4.-, EC:3.6.4.12, GO:0000400, GO:0003677, GO:0003689, GO:0005524, GO:0005737, GO:0006281, GO:0006310, GO:0009378, GO:0016887, GO:0036121, GO:0048476, GO:0061749, GO:0061775, GO:0140584, GO:0140665, GO:0140849, GO:1990518, RefSeq:WP_011275578.1, SO:0001217, UniParc:UPI000054BA7A, UniRef:UniRef100_Q4L6Y6, UniRef:UniRef50_O32055, UniRef:UniRef90_Q4L6Y6 contig_1 cds 1135081 1136106 + GCA012955505_01382 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA COG:COG0809, COG:J, EC:2.4.99.17, GO:0002099, GO:0005737, GO:0008616, GO:0016740, GO:0016853, GO:0051075, KEGG:K07568, RefSeq:WP_011275579.1, SO:0001217, UniParc:UPI000054BA7B, UniRef:UniRef100_Q4L6Y5, UniRef:UniRef50_A8AYK5, UniRef:UniRef90_Q4L6Y5 contig_1 cds 1136126 1137265 + GCA012955505_01383 tgt tRNA guanosine(34) transglycosylase Tgt COG:COG0343, COG:J, EC:2.4.2.29, GO:0002099, GO:0005737, GO:0005829, GO:0006400, GO:0008479, GO:0008616, GO:0046872, GO:0101030, KEGG:K00773, RefSeq:WP_016930844.1, SO:0001217, UniParc:UPI00030F9A8A, UniRef:UniRef100_A0A7T8V0X1, UniRef:UniRef50_O32053, UniRef:UniRef90_Q2FXT6 contig_1 cds 1137281 1137541 + GCA012955505_01384 yajC preprotein translocase subunit YajC COG:COG1862, COG:U, GO:0005886, GO:0009306, GO:0015450, KEGG:K03210, RefSeq:WP_011275581.1, SO:0001217, UniParc:UPI000054BA7D, UniRef:UniRef100_A0A2A1KA09, UniRef:UniRef50_B9DNG6, UniRef:UniRef90_A0A2A1KA09 contig_1 cds 1137766 1140051 + GCA012955505_01385 secDF protein translocase subunit SecDF COG:COG0342, COG:U, RefSeq:WP_016930845.1, SO:0001217, UniParc:UPI0002DEF53A, UniRef:UniRef100_A0A2A1K8M5, UniRef:UniRef50_B9E715, UniRef:UniRef90_Q4L6Y2 contig_1 cds 1140328 1142397 + GCA012955505_01386 recJ single-stranded-DNA-specific exonuclease RecJ COG:COG4199, COG:L, EC:3.1.-.-, GO:0006281, GO:0006310, GO:0008409, KEGG:K07462, SO:0001217, UniRef:UniRef50_A0AAP8TSV1, UniRef:UniRef90_A0A7Z1N4P2 contig_1 cds 1142419 1142937 + GCA012955505_01387 apt adenine phosphoribosyltransferase COG:COG0503, COG:F, EC:2.4.2.7, GO:0002055, GO:0003999, GO:0005737, GO:0006166, GO:0006168, GO:0009116, GO:0016208, GO:0044209, KEGG:K00759, RefSeq:WP_011275584.1, SO:0001217, UniParc:UPI000054BA80, UniRef:UniRef100_Q4L6Y0, UniRef:UniRef50_Q1G9R7, UniRef:UniRef90_Q2FXU0 contig_1 cds 1143306 1144043 + GCA012955505_01388 HD domain-containing protein SO:0001217, UniRef:UniRef50_G9ZSJ0, UniRef:UniRef90_UPI00164335B5 contig_1 cds 1144059 1145495 + GCA012955505_01389 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase SO:0001217, UniRef:UniRef50_A0A8J7CH48, UniRef:UniRef90_UPI001C3EAD65 contig_1 cds 1145622 1145810 + GCA012955505_01390 dtd (pseudo) D-aminoacyl-tRNA deacylase COG:COG1490, COG:J, EC:3.1.1.96, GO:0000049, GO:0004045, GO:0005737, GO:0008152, GO:0019478, GO:0043908, GO:0051500, GO:0106026, KEGG:K07560, SO:0001217, UniRef:UniRef50_Q2FXU2, UniRef:UniRef90_Q4L6X8 contig_1 cds 1145915 1146790 + GCA012955505_01391 lytH putative cell wall amidase LytH COG:COG0860, COG:M, EC:3.5.1.-, GO:0005576, GO:0008745, GO:0009253, GO:0030288, GO:0071555, KEGG:K01448, RefSeq:WP_016930849.1, SO:0001217, UniParc:UPI0002E34111, UniRef:UniRef100_A0A2A1K8I0, UniRef:UniRef50_Q2FXU3, UniRef:UniRef90_Q4L6X7 contig_1 cds 1147151 1148422 + GCA012955505_01392 hisS histidine--tRNA ligase COG:COG0124, COG:J, EC:6.1.1.21, GO:0004821, GO:0005524, GO:0005737, GO:0006427, GO:0016740, KEGG:K01892, RefSeq:WP_011275588.1, SO:0001217, UniParc:UPI000054BA84, UniRef:UniRef100_Q4L6X6, UniRef:UniRef50_O32039, UniRef:UniRef90_Q4L6X6 contig_1 cds 1148440 1150206 + GCA012955505_01393 aspS aspartate--tRNA ligase COG:COG0173, COG:J, EC:6.1.1.12, GO:0000166, GO:0003676, GO:0004812, GO:0004815, GO:0005524, GO:0005737, GO:0006418, GO:0006422, GO:0016740, GO:0016874, RefSeq:WP_011275589.1, SO:0001217, UniParc:UPI000054BA85, UniRef:UniRef100_Q4L6X5, UniRef:UniRef50_A9KIA6, UniRef:UniRef90_Q5HNS2 contig_1 ncRNA 1150435 1150625 + GCA012955505_01394 6S 6S / SsrS RNA RFAM:RF00013, SO:0000655 contig_1 cds 1150717 1151493 + GCA012955505_01395 tcdA tRNA threonylcarbamoyladenosine dehydratase COG:COG1179, COG:J, SO:0001217, UniRef:UniRef50_A0A098M888, UniRef:UniRef90_A0A2K0A7K5 contig_1 cds 1151556 1152824 - GCA012955505_01396 rarA Recombination factor protein RarA COG:COG2256, COG:L, KEGG:K07478, RefSeq:WP_011275591.1, SO:0001217, UniParc:UPI000054BA87, UniRef:UniRef100_A0A2A1K9Z9, UniRef:UniRef50_A0A1S0ZBL1, UniRef:UniRef90_A0A380FYU2 contig_1 cds 1152910 1153311 + GCA012955505_01397 cymR cysteine metabolism transcriptional regulator CymR COG:COG1959, COG:K, KEGG:K17472, SO:0001217, UniRef:UniRef50_B9E703, UniRef:UniRef90_A0A2X2K6J6 contig_1 cds 1153315 1154181 - GCA012955505_01398 ssuD LLM class flavin-dependent oxidoreductase COG:COG2141, COG:HR, SO:0001217, UniRef:UniRef50_A0A0D6HHK7, UniRef:UniRef90_A0A2A1KBK1 contig_1 cds 1154370 1155509 + GCA012955505_01399 nifS Aminotransferase class V domain-containing protein COG:COG1104, COG:E, EC:2.8.1.7, KEGG:K04487, RefSeq:WP_053016531.1, SO:0001217, UniParc:UPI00069D5FC6, UniRef:UniRef100_A0A2A1KC56, UniRef:UniRef50_A0A391MGC8, UniRef:UniRef90_Q4L6W9 contig_1 cds 1155512 1156624 + GCA012955505_01400 mnmA tRNA 2-thiouridine(34) synthase MnmA COG:COG0482, COG:J, EC:2.8.1.13, GO:0000049, GO:0002143, GO:0005524, GO:0005737, GO:0008033, GO:0016740, GO:0016783, GO:0103016, KEGG:K00566, RefSeq:WP_011275596.1, SO:0001217, UniParc:UPI000054BA8C, UniRef:UniRef100_Q4L6W8, UniRef:UniRef50_Q812R6, UniRef:UniRef90_Q4L6W8 contig_1 cds 1157029 1157493 + GCA012955505_01401 hypothetical protein PFAM:PF00515.34, PFAM:PF07719.23, PFAM:PF12895.13, PFAM:PF13174.12, PFAM:PF13176.12, PFAM:PF13181.12, PFAM:PF13414.12, PFAM:PF13424.12, PFAM:PF13428.12, PFAM:PF13431.12, PFAM:PF13432.12, PFAM:PF14559.12 contig_1 cds 1157495 1159933 + GCA012955505_01402 recD ATP-dependent RecD2 DNA helicase COG:COG0507, COG:L, RefSeq:WP_011275598.1, SO:0001217, UniParc:UPI000054BA8E, UniRef:UniRef100_A0A2A1K8G8, UniRef:UniRef50_A0A654AZ37, UniRef:UniRef90_A0A2K0A7L1 contig_1 cds 1160190 1162820 + GCA012955505_01403 alaS alanine--tRNA ligase COG:COG0013, COG:J, EC:6.1.1.7, GO:0000049, GO:0000166, GO:0002161, GO:0004813, GO:0005524, GO:0005737, GO:0005829, GO:0006419, GO:0008270, GO:0016740, RefSeq:WP_016930853.1, SO:0001217, UniParc:UPI0003116B6F, UniRef:UniRef100_A0A2A1KDI8, UniRef:UniRef50_Q03ER8, UniRef:UniRef90_Q4L6W5 contig_1 cds 1162887 1163147 + GCA012955505_01404 ireB IreB family regulatory phosphoprotein COG:COG4472, COG:S, RefSeq:WP_011275600.1, SO:0001217, UniParc:UPI000054BA90, UniRef:UniRef100_Q4L6W4, UniRef:UniRef50_Q4L6W4, UniRef:UniRef90_Q4L6W4 contig_1 cds 1163151 1163579 + GCA012955505_01405 ruvX Holliday junction resolvase RuvX COG:COG0816, COG:JLK, EC:3.1.-.-, EC:3.1.21.10, GO:0000967, GO:0004518, GO:0005829, GO:0006364, RefSeq:WP_011275601.1, SO:0001217, UniParc:UPI000054BA91, UniRef:UniRef100_Q4L6W3, UniRef:UniRef50_Q2FXW1, UniRef:UniRef90_Q4L6W3 contig_1 cds 1163594 1163908 + GCA012955505_01406 yrzB UPF0473 protein SH1304 COG:COG3906, COG:S, RefSeq:WP_011275602.1, SO:0001217, UniParc:UPI000054BA92, UniRef:UniRef100_Q4L6W2, UniRef:UniRef50_Q2FXW2, UniRef:UniRef90_Q4L6W2 contig_1 cds 1164138 1164743 + GCA012955505_01407 trmR tRNA 5-hydroxyuridine methyltransferase COG:COG4122, COG:J, SO:0001217, UniRef:UniRef50_A0A2A1K8K5, UniRef:UniRef90_A0A2A1K8K5 contig_1 cds 1164746 1165573 + GCA012955505_01408 rlhA U32 family peptidase COG:COG0826, COG:J, SO:0001217, UniRef:UniRef50_O32035, UniRef:UniRef90_Q4L6W0 contig_1 cds 1165711 1166445 + GCA012955505_01409 Peptidase, U32 family large subunit (C1) SO:0001217, UniRef:UniRef50_A0A380FIT1 contig_1 cds 1166423 1166797 + GCA012955505_01410 U32 family peptidase C-terminal domain-containing protein SO:0001217, UniRef:UniRef50_UPI0036F2D43D contig_1 cds 1166797 1167420 + GCA012955505_01411 udk uridine kinase COG:COG0572, COG:F, EC:2.7.1.48, GO:0004849, GO:0005524, GO:0005737, GO:0043771, GO:0044206, GO:0044211, RefSeq:WP_011275606.1, SO:0001217, UniParc:UPI000054BA96, UniRef:UniRef100_Q4L6V8, UniRef:UniRef50_Q9KDD8, UniRef:UniRef90_Q2FXW6 contig_1 cds 1167496 1167972 + GCA012955505_01412 greA transcription elongation factor GreA COG:COG0782, COG:K, GO:0003677, GO:0006354, GO:0032784, GO:0070063, RefSeq:WP_011275607.1, SO:0001217, UniParc:UPI000054BA97, UniRef:UniRef100_Q4L6V7, UniRef:UniRef50_Q2FXW7, UniRef:UniRef90_Q2FXW7 contig_1 cds 1168188 1168478 + GCA012955505_01413 hypothetical protein contig_1 cds 1168481 1168915 + GCA012955505_01414 pxpB 5-oxoprolinase subunit PxpB SO:0001217, UniRef:UniRef50_UPI0037C51B93 contig_1 cds 1168905 1169798 + GCA012955505_01415 pxpC Biotin-dependent carboxyltransferase COG:COG1984, COG:E, SO:0001217, UniRef:UniRef50_Q2FXW9, UniRef:UniRef90_A0A5B2YWB1 contig_1 cds 1169870 1170304 + GCA012955505_01416 accB Biotin carboxyl carrier protein of acetyl-CoA carboxylase COG:COG0511, COG:I, SO:0001217, UniRef:UniRef50_A0A380FYW2, UniRef:UniRef90_A0A2A1KAU1 contig_1 cds 1170319 1171680 + GCA012955505_01417 accC Acetyl-CoA carboxylase biotin carboxylase subunit COG:COG0439, COG:I, RefSeq:WP_011275611.1, SO:0001217, UniParc:UPI000054BA9B, UniRef:UniRef100_A0A2A1KAK8, UniRef:UniRef50_A0A2T4PV93, UniRef:UniRef90_A0A2A1KAK8 contig_1 cds 1171680 1172432 + GCA012955505_01418 pxpA 5-oxoprolinase subunit PxpA COG:COG1540, COG:E, EC:3.5.2.9, GO:0003824, GO:0005524, GO:0005975, GO:0017168, KEGG:K07160, RefSeq:WP_011275612.1, SO:0001217, UniParc:UPI000054BA9C, UniRef:UniRef100_Q4L6V2, UniRef:UniRef50_Q57RM2, UniRef:UniRef90_Q4L6V2 contig_1 cds 1172445 1173701 + GCA012955505_01419 mntH Divalent metal cation transporter COG:COG1914, COG:P, RefSeq:WP_011275613.1, SO:0001217, UniParc:UPI000054BA9D, UniRef:UniRef100_A0A2A1K8J5, UniRef:UniRef50_Q5HNU7, UniRef:UniRef90_A0A2A1K8J5 contig_1 cds 1173945 1174631 + GCA012955505_01420 mtnN 5'-methylthioadenosine/adenosylhomocysteine nucleosidase COG:COG0775, COG:FH, EC:3.2.2.9, GO:0005829, GO:0008782, GO:0008930, GO:0009116, GO:0009164, GO:0019284, GO:0019509, KEGG:K01243, RefSeq:WP_016930856.1, SO:0001217, UniParc:UPI0002F07619, UniRef:UniRef100_A0A2A1KBH7, UniRef:UniRef50_Q4L6V0, UniRef:UniRef90_Q4L6V0 contig_1 cds 1174679 1175182 + GCA012955505_01421 yqeG YqeG family HAD IIIA-type phosphatase COG:COG2179, COG:R, SO:0001217, UniRef:UniRef50_Q2FXX9, UniRef:UniRef90_A0A2K0A7M3 contig_1 cds 1175669 1176232 + GCA012955505_01422 GTP-binding protein YqeH, possibly involved in replication initiation SO:0001217, UniRef:UniRef50_A0A380EKQ4 contig_1 cds 1176245 1177051 + GCA012955505_01423 aroE Shikimate dehydrogenase (NADP(+)) COG:COG0169, COG:E, EC:1.1.1.25, GO:0004764, GO:0005829, GO:0008652, GO:0009073, GO:0009423, GO:0019632, GO:0050661, RefSeq:WP_011275617.1, SO:0001217, UniParc:UPI000054BAA1, UniRef:UniRef100_Q4L6U7, UniRef:UniRef50_Q5HNV1, UniRef:UniRef90_Q4L6U7 contig_1 cds 1177053 1177343 + GCA012955505_01424 yhbY ribosome assembly RNA-binding protein YhbY GO:0003723, RefSeq:WP_016930857.1, SO:0001217, UniParc:UPI00031B8248, UniRef:UniRef100_A0A2A1K8E6, UniRef:UniRef50_Q4L6U6, UniRef:UniRef90_A0A657ZV78 contig_1 cds 1177344 1177922 + GCA012955505_01425 nadD nicotinate-nucleotide adenylyltransferase COG:COG1057, COG:H, EC:2.7.7.18, GO:0004515, GO:0005524, GO:0009435, GO:0016779, RefSeq:WP_011275619.1, SO:0001217, UniParc:UPI000054BAA3, UniRef:UniRef100_Q4L6U5, UniRef:UniRef50_Q2FXY3, UniRef:UniRef90_Q4L6U5 contig_1 cds 1177912 1178496 + GCA012955505_01426 yqeK bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK COG:COG1713, COG:TR, EC:3.6.1.41, RefSeq:WP_011275620.1, SO:0001217, UniParc:UPI000054BAA4, UniRef:UniRef100_A0A2A1KAT1, UniRef:UniRef50_A0A143P804, UniRef:UniRef90_A0A2A1KAT1 contig_1 cds 1178497 1178850 + GCA012955505_01427 rsfS ribosome silencing factor COG:COG0799, COG:J, GO:0017148, GO:0043022, RefSeq:WP_016930858.1, SO:0001217, UniParc:UPI0002FCF855, UniRef:UniRef100_UPI0002FCF855, UniRef:UniRef50_A0A0U1EFZ9, UniRef:UniRef90_A0A380FZB1 contig_1 cds 1178851 1179576 + GCA012955505_01428 Methyltransferase domain-containing protein COG:COG4976, COG:R, RefSeq:WP_016930859.1, SO:0001217, UniParc:UPI0002F99186, UniRef:UniRef100_A0A2A1K9X0, UniRef:UniRef50_B9DNI4, UniRef:UniRef90_Q4L6U2 contig_1 cds 1179629 1179847 + GCA012955505_01429 (pseudo) helix-hairpin-helix domain-containing protein SO:0001217, UniRef:UniRef50_UPI000D1E6013, UniRef:UniRef50_UPI0022DD9680, UniRef:UniRef90_UPI000A99E119, UniRef:UniRef90_UPI0022DD9680 contig_1 cds 1179841 1180113 + GCA012955505_01430 (pseudo) helix-hairpin-helix domain-containing protein SO:0001217, UniRef:UniRef50_UPI001F325108, UniRef:UniRef90_UPI001F325108 contig_1 cds 1180246 1180686 + GCA012955505_01431 comEB ComE operon protein 2 COG:COG2131, COG:FJ, SO:0001217, UniRef:UniRef50_A0A1W7ACC4, UniRef:UniRef90_A0A2A1KBG8 contig_1 cds 1181217 1181615 + GCA012955505_01432 ComEC/Rec2 family competence protein KEGG:K02238, SO:0001217, UniRef:UniRef50_UPI001F5443C8, UniRef:UniRef90_UPI001F5443C8 contig_1 cds 1181593 1181940 + GCA012955505_01433 ComEC/Rec2 family competence protein SO:0001217, UniRef:UniRef50_UPI0035323F33 contig_1 cds 1182016 1182372 + GCA012955505_01434 hypothetical protein PFAM:PF06144.19 contig_1 ncRNA 1182793 1183018 - GCA012955505_01435 tsr24 S. aureus tsr24 small RNA RFAM:RF02577, SO:0000655 contig_1 cds 1183052 1183270 + GCA012955505_01436 transposase SO:0001217, UniRef:UniRef50_A0A0H3JW36, UniRef:UniRef90_UPI0011A2F9F6 contig_1 cds 1183275 1183526 - GCA012955505_01437 rpsT 30S ribosomal protein S20 COG:COG0268, COG:J, GO:0003723, GO:0003735, GO:0005829, GO:0005840, GO:0006412, GO:0015935, GO:0070181, KEGG:K02968, RefSeq:WP_011275628.1, SO:0001217, UniParc:UPI000054BAAC, UniRef:UniRef100_Q4L6T5, UniRef:UniRef50_Q5HNW1, UniRef:UniRef90_Q4L6T5 contig_1 cds 1183984 1185675 + GCA012955505_01438 lepA translation elongation factor 4 COG:COG0481, COG:J, EC:3.6.5.n1, GO:0003746, GO:0003924, GO:0005525, GO:0005886, GO:0043022, GO:0045727, GO:1990606, SO:0001217, UniRef:UniRef50_Q2FXY7, UniRef:UniRef90_Q2FXY7 contig_1 cds 1185808 1186929 + GCA012955505_01439 hemW radical SAM family heme chaperone HemW COG:COG0635, COG:H, GO:0005737, GO:0006779, GO:0051539, GO:0051989, RefSeq:WP_011275630.1, SO:0001217, UniParc:UPI000054BAAE, UniRef:UniRef100_A0A2A1K8M4, UniRef:UniRef50_A0A0D6HI97, UniRef:UniRef90_A0A2A1K8M4 contig_1 cds 1187031 1188008 + GCA012955505_01440 hrcA heat-inducible transcriptional repressor HrcA COG:COG1420, COG:K, GO:0003677, GO:0006355, GO:0045892, KEGG:K03705, RefSeq:WP_011275631.1, SO:0001217, UniParc:UPI000054BAAF, UniRef:UniRef100_Q4L6T2, UniRef:UniRef50_P68792, UniRef:UniRef90_Q4L6T2 contig_1 cds 1188040 1188666 + GCA012955505_01441 grpE nucleotide exchange factor GrpE COG:COG0576, COG:O, GO:0000774, GO:0005737, GO:0006457, GO:0042803, GO:0051082, GO:0051087, KEGG:K03687, RefSeq:WP_011275632.1, SO:0001217, UniParc:UPI000054BAB0, UniRef:UniRef100_Q4L6T1, UniRef:UniRef50_Q2FXZ1, UniRef:UniRef90_Q4L6T1 contig_1 cds 1188717 1190552 + GCA012955505_01442 dnaK molecular chaperone DnaK COG:COG0443, COG:O, GO:0005524, GO:0006457, GO:0016887, GO:0051082, GO:0140662, RefSeq:WP_049394694.1, SO:0001217, UniParc:UPI00066E0D4E, UniRef:UniRef100_UPI00066E0D4E, UniRef:UniRef50_P17820, UniRef:UniRef90_Q49Y22 contig_1 cds 1190705 1191838 + GCA012955505_01443 dnaJ molecular chaperone DnaJ COG:COG0484, COG:O, GO:0005524, GO:0006457, GO:0009408, GO:0031072, GO:0051082, RefSeq:WP_029376661.1, SO:0001217, UniParc:UPI000313B293, UniRef:UniRef100_UPI000313B293, UniRef:UniRef50_P95830, UniRef:UniRef90_A0A4Z1BSR3 contig_1 cds 1191843 1192781 + GCA012955505_01444 prmA 50S ribosomal protein L11 methyltransferase COG:COG2264, COG:J, EC:2.1.1.-, GO:0005737, GO:0008757, GO:0032259, GO:0036211, GO:0042054, RefSeq:WP_145463250.1, SO:0001217, UniParc:UPI0011A128A9, UniRef:UniRef100_UPI0011A128A9, UniRef:UniRef50_Q2FXZ4, UniRef:UniRef90_Q4L6S8 contig_1 cds 1192774 1193535 + GCA012955505_01445 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase COG:COG1385, COG:J, EC:2.1.1.193, GO:0006364, GO:0008168, SO:0001217, UniRef:UniRef50_A0A122ER25, UniRef:UniRef90_A0A2A1KA49 contig_1 cds 1193532 1194887 + GCA012955505_01446 mtaB tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB EC:2.8.4.5, GO:0006400, GO:0051539, GO:0061712, GO:1904047, KEGG:K18707, SO:0001217, UniRef:UniRef50_P54462, UniRef:UniRef90_UPI00287988D6 contig_1 cds 1195017 1195193 + GCA012955505_01447 rpsU 30S ribosomal protein S21 COG:COG0828, COG:J, GO:0003735, GO:0005840, GO:0006412, GO:1990904, RefSeq:WP_000048060.1, SO:0001217, UniParc:UPI000004802C, UniRef:UniRef100_Q2FXZ7, UniRef:UniRef50_Q5M3E1, UniRef:UniRef90_Q2FXZ7 contig_1 cds 1195351 1196061 + GCA012955505_01448 nfeD Serine protease COG:COG1030, COG:O, KEGG:K07403, RefSeq:WP_011275638.1, SO:0001217, UniParc:UPI000054BAB6, UniRef:UniRef100_A0A2A1KDQ9, UniRef:UniRef50_Q2FXZ8, UniRef:UniRef90_A0A2A1KDQ9 contig_1 cds 1196074 1197060 + GCA012955505_01449 floA flotillin-like protein FloA COG:COG4864, COG:M, GO:0005886, GO:0045121, RefSeq:WP_011275639.1, SO:0001217, UniParc:UPI000054BAB7, UniRef:UniRef100_Q4L6S3, UniRef:UniRef50_P54466, UniRef:UniRef90_Q49Y16 contig_1 cds 1197079 1197768 + GCA012955505_01450 Iron transporter RefSeq:WP_011275640.1, SO:0001217, UniParc:UPI000054BAB8, UniRef:UniRef100_Q4L6S2, UniRef:UniRef50_A0A151A4V3, UniRef:UniRef90_Q4L6S2 contig_1 cds 1198081 1199028 + GCA012955505_01451 phoH PhoH-like protein COG:COG1702, COG:T, KEGG:K06217, RefSeq:WP_011275641.1, SO:0001217, UniParc:UPI000054BAB9, UniRef:UniRef100_A0A2A1KDR1, UniRef:UniRef50_A0A174T1P7, UniRef:UniRef90_A0A380FZD0 contig_1 cds 1199029 1199490 + GCA012955505_01452 ybeY rRNA maturation RNase YbeY COG:COG0319, COG:J, EC:3.1.-.-, GO:0004222, GO:0004521, GO:0004540, GO:0005737, GO:0006364, GO:0008270, GO:0042254, GO:0046872, RefSeq:WP_011275642.1, SO:0001217, UniParc:UPI000054BABA, UniRef:UniRef100_Q4L6S0, UniRef:UniRef50_Q2FY02, UniRef:UniRef90_Q4L6S0 contig_1 cds 1199612 1199830 + GCA012955505_01453 Diacylglycerol kinase SO:0001217, UniParc:UPI000054BABB, UniRef:UniRef100_Q4L6R9, UniRef:UniRef50_Q4L6R9, UniRef:UniRef90_Q4L6R9 contig_1 cds 1199850 1200254 + GCA012955505_01454 cdd cytidine deaminase COG:COG0295, COG:F, EC:3.5.4.5, GO:0004126, GO:0005737, GO:0008270, GO:0008655, GO:0009972, KEGG:K01489, RefSeq:WP_011275644.1, SO:0001217, UniParc:UPI000054BABC, UniRef:UniRef100_A0A2A1K8S5, UniRef:UniRef50_A0A1W7AC49, UniRef:UniRef90_A0A2A1K8S5 contig_1 cds 1200255 1201154 + GCA012955505_01455 era GTPase Era COG:COG1159, COG:J, GO:0000028, GO:0003723, GO:0003924, GO:0005525, GO:0005829, GO:0005886, GO:0043024, GO:0070181, RefSeq:WP_011275645.1, SO:0001217, UniParc:UPI00016100B8, UniRef:UniRef100_Q4L6R7, UniRef:UniRef50_P42182, UniRef:UniRef90_Q2FY06 contig_1 cds 1201186 1201938 + GCA012955505_01456 recO DNA repair protein RecO COG:COG1381, COG:L, GO:0003677, GO:0006281, GO:0006302, GO:0006310, GO:0043590, KEGG:K03584, RefSeq:WP_011275646.1, SO:0001217, UniParc:UPI000054BABE, UniRef:UniRef100_Q4L6R6, UniRef:UniRef50_Q49Y09, UniRef:UniRef90_Q4L6R6 contig_1 cds 1201990 1203384 - GCA012955505_01457 glyQS glycine--tRNA ligase COG:COG0423, COG:J, EC:6.1.1.14, GO:0000166, GO:0004820, GO:0005524, GO:0005737, GO:0006426, GO:0016740, GO:0046983, KEGG:K01880, SO:0001217, UniRef:UniRef50_Q2FY08, UniRef:UniRef90_Q2FY08 contig_1 cds 1203855 1204235 + GCA012955505_01458 hypothetical protein PFAM:PF00571.33 contig_1 cds 1204240 1205055 + GCA012955505_01459 ppsR Putative pyruvate, phosphate dikinase regulatory protein 2 COG:COG1806, COG:T, EC:2.7.11.32, EC:2.7.4.27, GO:0004674, GO:0005524, GO:0016776, GO:0043531, RefSeq:WP_011275649.1, SO:0001217, UniParc:UPI000054BAC1, UniRef:UniRef100_Q4L6R3, UniRef:UniRef50_Q2FY10, UniRef:UniRef90_Q4L6R3 contig_1 cds 1205115 1206920 + GCA012955505_01460 dnaG DNA primase COG:COG0358, COG:L, RefSeq:WP_016931115.1, SO:0001217, UniParc:UPI000303D7EB, UniRef:UniRef100_A0A2A1KAF9, UniRef:UniRef50_O05338, UniRef:UniRef90_Q4L6R2 contig_1 cds 1207082 1208188 + GCA012955505_01461 rpoD RNA polymerase sigma factor RpoD COG:COG0568, COG:K, GO:0003677, GO:0005737, GO:0006352, GO:0006355, GO:0016987, KEGG:K03086, RefSeq:WP_011275651.1, SO:0001217, UniParc:UPI000054BAC3, UniRef:UniRef100_A0A2A1KDS3, UniRef:UniRef50_P0A0J0, UniRef:UniRef90_P0A0J0 contig_1 cds 1208377 1209066 + GCA012955505_01462 trmK tRNA (Adenine(22)-N(1))-methyltransferase TrmK COG:COG2384, COG:J, EC:2.1.1.217, KEGG:K06967, RefSeq:WP_011275652.1, SO:0001217, UniParc:UPI000054BAC4, UniRef:UniRef100_A0A2A1KCD6, UniRef:UniRef50_A0A239Z5U5, UniRef:UniRef90_A0A2A1KCD6 contig_1 cds 1209056 1210156 + GCA012955505_01463 yqfO Nif3-like dinuclear metal center hexameric protein COG:COG3323, COG:S, EC:3.5.4.16, GO:0005737, GO:0051540, KEGG:K22391, RefSeq:WP_011275653.1, SO:0001217, UniParc:UPI000054BAC5, UniRef:UniRef100_A0A7Z1SEY5, UniRef:UniRef50_P67272, UniRef:UniRef90_A0A7Z1SEY5 contig_1 cds 1210204 1210824 + GCA012955505_01464 DEAD/DEAH box helicase SO:0001217, UniRef:UniRef50_A0AAW9YZS6 contig_1 cds 1210944 1211342 + GCA012955505_01465 yqfR ATP-dependent RNA helicase YqfR SO:0001217, UniRef:UniRef50_A0A380E226 contig_1 cds 1211349 1212179 + GCA012955505_01466 nfo deoxyribonuclease IV COG:COG0648, COG:L, EC:3.1.21.2, GO:0003677, GO:0003906, GO:0006281, GO:0006284, GO:0008081, GO:0008270, GO:0008833, SO:0001217, UniRef:UniRef50_P54476, UniRef:UniRef90_Q4L6Q7 contig_1 cds 1212478 1213236 + GCA012955505_01467 znuC Metal ABC transporter ATP-binding protein COG:COG1121, COG:P, SO:0001217, UniRef:UniRef50_A0A1W7AC50, UniRef:UniRef90_A0A2A1KAV6 contig_1 cds 1213299 1213934 + GCA012955505_01468 znuB (pseudo) MreB protein COG:COG1108, COG:P, SO:0001217, UniRef:UniRef50_A0A380G8P2, UniRef:UniRef90_Q4L6Q5 contig_1 cds 1213921 1214124 + GCA012955505_01469 hypothetical protein contig_1 cds 1214161 1214472 + GCA012955505_01470 transcriptional repressor SO:0001217, UniRef:UniRef50_UPI001F4F5E08 contig_1 cds 1214873 1215472 + GCA012955505_01471 sodA Superoxide dismutase [Mn/Fe] COG:COG0605, COG:P, EC:1.15.1.1, GO:0004784, GO:0005737, GO:0046872, RefSeq:WP_016931111.1, SO:0001217, UniParc:UPI00015680A4, UniRef:UniRef100_Q4L6Q3, UniRef:UniRef50_Q9K4V3, UniRef:UniRef90_Q9K4V3 contig_1 cds 1215600 1216481 + GCA012955505_01472 ftsI (pseudo) Penicillin-binding protein 2 COG:COG0768, COG:DM, EC:3.4.-.-, KEGG:K12553, SO:0001217, UniRef:UniRef50_P83331, UniRef:UniRef90_A0A7Z1MX61 contig_1 cds 1216438 1217613 + GCA012955505_01473 penicillin-binding transpeptidase domain-containing protein SO:0001217, UniRef:UniRef50_UPI00091FF8EF contig_1 cds 1217730 1217879 + GCA012955505_01474 rpmG 50S ribosomal protein L33 COG:COG0267, COG:J, GO:0003735, GO:0005737, GO:0005840, GO:0006412, GO:1990904, KEGG:K02913, RefSeq:WP_011275661.1, SO:0001217, UniParc:UPI000054BACD, UniRef:UniRef100_Q4L6Q1, UniRef:UniRef50_Q2FYU6, UniRef:UniRef90_Q4L6Q1 contig_1 cds 1218109 1218495 + GCA012955505_01475 5-formyltetrahydrofolate cyclo-ligase SO:0001217, UniRef:UniRef50_UPI000D1E7F87 contig_1 cds 1218511 1219575 + GCA012955505_01476 Membrane peptidase, contains TPR repeat domain SO:0001217, UniRef:UniRef50_A0A2X2LYR5 contig_1 cds 1219568 1219813 + GCA012955505_01477 hypothetical protein contig_1 cds 1220093 1221079 + GCA012955505_01478 nagC Glucokinase COG:COG1940, COG:GK, RefSeq:WP_037558191.1, SO:0001217, UniParc:UPI0004454B68, UniRef:UniRef100_A0A2A1KA88, UniRef:UniRef50_Q56198, UniRef:UniRef90_A0A7T8UTC8 contig_1 cds 1221079 1221402 + GCA012955505_01479 yqgV Thiamine-binding protein domain-containing protein COG:COG0011, COG:H, RefSeq:WP_011275666.1, SO:0001217, UniParc:UPI000054BAD2, UniRef:UniRef100_A0A2A1KAX6, UniRef:UniRef50_Q56200, UniRef:UniRef90_A0A2K4FFE3 contig_1 cds 1221404 1222030 + GCA012955505_01480 gloB Hydroxyacylglutathione hydrolase COG:COG0491, COG:R, SO:0001217, UniRef:UniRef50_Q2FY29, UniRef:UniRef90_A0A2A1KB54 contig_1 cds 1222082 1222957 + GCA012955505_01481 comGA competence type IV pilus ATPase ComGA COG:COG2804, COG:NU, SO:0001217, UniRef:UniRef50_Q2FY30, UniRef:UniRef90_A0A2A1KDU8 contig_1 cds 1223626 1223724 + GCA012955505_01482 hypothetical protein contig_1 cds 1223878 1224135 + GCA012955505_01483 Competence protein ComGC SO:0001217, UniRef:UniRef50_A0A418IBK5 contig_1 cds 1224113 1224409 + GCA012955505_01484 comGD (pseudo) competence type IV pilus minor pilin ComGD SO:0001217, UniRef:UniRef50_A0A2A1KDV2, UniRef:UniRef90_A0A2A1KDV2 contig_1 cds 1224602 1225030 + GCA012955505_01485 Prepilin-type N-terminal cleavage/methylation domain-containing protein SO:0001217, UniRef:UniRef50_Q4L6N9, UniRef:UniRef90_Q4L6N9 contig_1 cds 1225147 1225383 + GCA012955505_01486 hypothetical protein PFAM:PF01202.28 contig_1 ncRNA-region 1225619 1225734 + Glycine riboswitch aptamer RFAM:RF00504, SO:0000035 contig_1 cds 1225804 1226868 + GCA012955505_01487 gcvT glycine cleavage system aminomethyltransferase GcvT COG:COG0404, COG:E, EC:2.1.2.10, GO:0004047, GO:0005737, GO:0005829, GO:0005960, GO:0008483, GO:0019464, SO:0001217, UniRef:UniRef50_Q2FY33, UniRef:UniRef90_Q4L6N7 contig_1 cds 1226885 1228237 + GCA012955505_01488 gcvPA aminomethyl-transferring glycine dehydrogenase subunit GcvPA COG:COG0403, COG:E, EC:1.4.4.2, GO:0004375, GO:0006546, GO:0009116, GO:0019464, RefSeq:WP_037558205.1, SO:0001217, UniParc:UPI00044677F6, UniRef:UniRef100_A0A2A1KB66, UniRef:UniRef50_Q81M07, UniRef:UniRef90_Q4L6N6 contig_1 cds 1228224 1229702 + GCA012955505_01489 gcvPB aminomethyl-transferring glycine dehydrogenase subunit GcvPB COG:COG1003, COG:E, EC:1.4.4.2, GO:0004375, GO:0005829, GO:0005960, GO:0006546, GO:0016594, GO:0019464, GO:0030170, RefSeq:WP_037536554.1, SO:0001217, UniParc:UPI00044A1627, UniRef:UniRef100_A0A2A1KDW3, UniRef:UniRef50_P54377, UniRef:UniRef90_Q2FY35 contig_1 cds 1229879 1230265 - GCA012955505_01490 pspE Rhodanese-like domain-containing protein COG:COG0607, COG:P, RefSeq:WP_011275678.1, SO:0001217, UniParc:UPI000054BADE, UniRef:UniRef100_A0A2J9WX19, UniRef:UniRef50_Q2FY36, UniRef:UniRef90_A0A2J9WX19 contig_1 cds 1230417 1231127 + GCA012955505_01491 lipM Octanoyltransferase LipM SO:0001217, UniRef:UniRef50_P54511 contig_1 cds 1231088 1231228 + GCA012955505_01492 hypothetical protein contig_1 cds 1231376 1231807 - GCA012955505_01493 Lipoprotein SO:0001217, UniRef:UniRef50_A0A2A1KCH6, UniRef:UniRef90_UPI001D14DC72 contig_1 cds 1231911 1232969 + GCA012955505_01494 pepP Aminopeptidase P family protein COG:COG0006, COG:E, EC:3.4.11.9, KEGG:K01262, RefSeq:WP_011275682.1, SO:0001217, UniParc:UPI000054BAE2, UniRef:UniRef100_A0A2A1KBW9, UniRef:UniRef50_A0A0D6XTL2, UniRef:UniRef90_A0A2A1KBW9 contig_1 cds 1232997 1233554 + GCA012955505_01495 efp elongation factor P COG:COG0231, COG:J, GO:0003746, GO:0005737, GO:0006414, GO:0043043, KEGG:K02356, RefSeq:WP_011275683.1, SO:0001217, UniParc:UPI000054BAE3, UniRef:UniRef100_Q4L6M9, UniRef:UniRef50_Q2FY41, UniRef:UniRef90_Q2FY41 contig_1 cds 1233702 1234187 + GCA012955505_01496 accB acetyl-CoA carboxylase biotin carboxyl carrier protein COG:COG0511, COG:I, EC:6.4.1.2, GO:0003989, GO:0006633, GO:0009317, RefSeq:WP_011275684.1, SO:0001217, UniParc:UPI000054BAE4, UniRef:UniRef100_A0A2A1KAA7, UniRef:UniRef50_A0A090LU16, UniRef:UniRef90_A0A2A1KAA7 contig_1 cds 1234187 1235542 + GCA012955505_01497 accC acetyl-CoA carboxylase biotin carboxylase subunit COG:COG4770, COG:I, EC:6.3.4.14, GO:0004075, GO:0009317, GO:0016874, RefSeq:WP_011275685.1, SO:0001217, UniParc:UPI000054BAE5, UniRef:UniRef100_A0A2A1KAZ4, UniRef:UniRef50_A0A0U1E6Z3, UniRef:UniRef90_A0A0U1E6Z3 contig_1 cds 1235918 1236304 + GCA012955505_01498 nusB transcription antitermination factor NusB COG:COG0781, COG:K, GO:0003723, GO:0005829, GO:0006353, GO:0031564, KEGG:K03625, RefSeq:WP_011275687.1, SO:0001217, UniParc:UPI000054BAE7, UniRef:UniRef100_Q4L6M5, UniRef:UniRef50_Q2FY45, UniRef:UniRef90_Q4L6M5 contig_1 cds 1236308 1237723 + GCA012955505_01499 xseA exodeoxyribonuclease VII large subunit COG:COG1570, COG:L, EC:3.1.11.6, GO:0003676, GO:0005737, GO:0006308, GO:0008855, GO:0009318, KEGG:K03601, SO:0001217, UniRef:UniRef50_Q2FY46, UniRef:UniRef90_Q4L6M4 contig_1 cds 1237701 1238420 + GCA012955505_01500 Geranyltranstransferase SO:0001217, UniRef:UniRef50_A0A4U9TB05 contig_1 cds 1238705 1239157 + GCA012955505_01501 ahrC transcriptional regulator AhrC/ArgR COG:COG1438, COG:K, GO:0003677, GO:0003700, GO:0005737, GO:0006355, GO:0006526, GO:0034618, GO:0051259, GO:1900079, KEGG:K03402, RefSeq:WP_011275691.1, SO:0001217, UniParc:UPI000054BAEB, UniRef:UniRef100_Q4L6M1, UniRef:UniRef50_P17893, UniRef:UniRef90_Q5HP32 contig_1 cds 1239173 1239580 + GCA012955505_01502 AAA family ATPase SO:0001217, UniRef:UniRef50_UPI0011873439 contig_1 cds 1239640 1240833 + GCA012955505_01503 recN DNA repair protein RecN SO:0001217, UniRef:UniRef50_UPI0013A69276 contig_1 cds 1241010 1241783 + GCA012955505_01504 FAD-dependent oxidoreductase SO:0001217, UniRef:UniRef50_UPI000A5D9722, UniRef:UniRef90_UPI000A5D9722 contig_1 cds 1241981 1242388 + GCA012955505_01505 hypothetical protein PFAM:PF02852.28 contig_1 cds 1242406 1243407 + GCA012955505_01506 acoA 2-oxoisovalerate dehydrogenase subunit alpha COG:C, COG:COG1071, RefSeq:WP_011275694.1, SO:0001217, UniParc:UPI000054BAEE, UniRef:UniRef100_A0A2A1KAB8, UniRef:UniRef50_A0A085UCJ1, UniRef:UniRef90_A0A380G2B5 contig_1 cds 1243400 1244383 + GCA012955505_01507 acoB Pyruvate dehydrogenase E1 component subunit beta COG:C, COG:COG0022, RefSeq:WP_011275695.1, SO:0001217, UniParc:UPI000054BAEF, UniRef:UniRef100_A0A2A1KB04, UniRef:UniRef50_P37941, UniRef:UniRef90_A0A380G031 contig_1 cds 1244396 1245724 + GCA012955505_01508 aceF Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex COG:C, COG:COG0508, RefSeq:WP_011275696.1, SO:0001217, UniParc:UPI000054BAF0, UniRef:UniRef100_A0A7Z1N3N9, UniRef:UniRef50_A0A7Z7QQ13, UniRef:UniRef90_A0A7Z1N3N9 contig_1 cds 1245827 1246264 + GCA012955505_01509 Bacilliredoxin SE_1195 GO:0045454, KEGG:K26958, RefSeq:WP_011275697.1, SO:0001217, UniParc:UPI000054BAF1, UniRef:UniRef100_Q4L6L5, UniRef:UniRef50_P54534, UniRef:UniRef90_Q8CSG4 contig_1 cds 1246277 1246774 + GCA012955505_01510 aromatic acid exporter family protein SO:0001217, UniRef:UniRef50_UPI000D48CC12, UniRef:UniRef90_UPI0027F548FD contig_1 cds 1246912 1247226 + GCA012955505_01511 hypothetical protein PFAM:PF11728.13 contig_1 ncRNA 1247302 1247526 - GCA012955505_01512 tsr24 S. aureus tsr24 small RNA RFAM:RF02577, SO:0000655 contig_1 cds 1247514 1248134 + GCA012955505_01513 Transposase for IS1272 SO:0001217, UniRef:UniRef50_Q4L6L3, UniRef:UniRef90_Q4L6L3 contig_1 cds 1248361 1249488 + GCA012955505_01514 pepD2 Peptidase M20 dimerisation domain-containing protein COG:COG2195, COG:E, EC:3.4.11.4, KEGG:K01258, RefSeq:WP_011275701.1, SO:0001217, UniParc:UPI000054BAF5, UniRef:UniRef100_A0A2A1KAK7, UniRef:UniRef50_A0A380G6E1, UniRef:UniRef90_A0A2A1KAK7 contig_1 cds 1249562 1250968 + GCA012955505_01515 gndA NADP-dependent phosphogluconate dehydrogenase COG:COG0362, COG:G, EC:1.1.1.44, GO:0004616, GO:0006098, GO:0016054, GO:0019521, GO:0050661, KEGG:K00033, RefSeq:WP_011275702.1, SO:0001217, UniParc:UPI000054BAF6, UniRef:UniRef100_A0A2A1KDY9, UniRef:UniRef50_P00350, UniRef:UniRef90_Q931R3 contig_1 cds 1251196 1252140 + GCA012955505_01516 purR LacI family transcriptional regulator COG:COG1609, COG:K, RefSeq:WP_016931104.1, SO:0001217, UniParc:UPI000362CA01, UniRef:UniRef100_UPI000362CA01, UniRef:UniRef50_A0A380G1P9, UniRef:UniRef90_A0A2A1KCJ6 contig_1 cds 1252153 1253799 + GCA012955505_01517 amyA Alpha-amylase COG:COG0366, COG:G, RefSeq:WP_011275704.1, SO:0001217, UniParc:UPI000054BAF8, UniRef:UniRef100_A0A2A1KBZ0, UniRef:UniRef50_A0A090XUH5, UniRef:UniRef90_A0A380FZ48 contig_1 ncRNA 1254016 1254109 - GCA012955505_01518 fstAT Fst antitoxin sRNA RFAM:RF01797, SO:0000655 contig_1 cds 1254230 1254508 - GCA012955505_01519 GyrI-like domain-containing protein SO:0001217, UniRef:UniRef50_UPI000E3B35C7 contig_1 cds 1254607 1255086 - GCA012955505_01520 helix-turn-helix domain-containing protein SO:0001217, UniRef:UniRef50_UPI001D142FF0, UniRef:UniRef90_UPI001D142FF0 contig_1 cds 1255359 1256843 - GCA012955505_01521 zwf glucose-6-phosphate dehydrogenase COG:COG0364, COG:G, EC:1.1.1.363, EC:1.1.1.49, GO:0004345, GO:0006006, GO:0006098, GO:0016614, GO:0050661, KEGG:K00036, RefSeq:WP_011275707.1, SO:0001217, UniParc:UPI000054BAFB, UniRef:UniRef100_A0A2A1KAC8, UniRef:UniRef50_Q5HP46, UniRef:UniRef90_A0A380G2C5 contig_1 cds 1257082 1258002 + GCA012955505_01522 rnz ribonuclease Z COG:COG1234, COG:J, EC:3.1.26.11, GO:0008270, GO:0016891, GO:0042780, GO:0042781, KEGG:K00784, RefSeq:WP_145463256.1, SO:0001217, UniParc:UPI00119E955E, UniRef:UniRef100_UPI00119E955E, UniRef:UniRef50_Q2FY67, UniRef:UniRef90_Q4L6K4 contig_1 cds 1258116 1258931 - GCA012955505_01523 proC pyrroline-5-carboxylate reductase COG:COG0345, COG:E, EC:1.5.1.2, GO:0004735, GO:0005737, GO:0006561, GO:0055129, KEGG:K00286, SO:0001217, UniRef:UniRef50_Q49XV0, UniRef:UniRef90_Q4L6K3 contig_1 cds 1259135 1259878 + GCA012955505_01524 yqjQ Short-chain dehydrogenase COG:COG0300, COG:R, SO:0001217, UniRef:UniRef50_A0A7I8NJV3, UniRef:UniRef90_A0A2A1KDZ0 contig_1 cds 1259989 1260912 - GCA012955505_01525 pdxI NADP-dependent oxidoreductase domain-containing protein COG:COG0667, COG:HR, SO:0001217, UniRef:UniRef50_A0A380G9Q4, UniRef:UniRef90_Q4L6K0 contig_1 cds 1260994 1261536 + GCA012955505_01526 yjhB ADP-ribose pyrophosphatase COG:COG1051, COG:F, RefSeq:WP_016931102.1, SO:0001217, UniParc:UPI0002F5144D, UniRef:UniRef100_UPI0002F5144D, UniRef:UniRef50_A0A8I0L781, UniRef:UniRef90_A0A2A1KDZ9 contig_1 cds 1261641 1262087 + GCA012955505_01527 fur Transcriptional regulator, Fur, putative COG:COG0735, COG:P, RefSeq:WP_011275714.1, SO:0001217, UniParc:UPI000054BB02, UniRef:UniRef100_A0A2A1KCK9, UniRef:UniRef50_Q2FY73, UniRef:UniRef90_Q2FY73 contig_1 cds 1262187 1263074 + GCA012955505_01528 xerD site-specific tyrosine recombinase XerD COG:COG4974, COG:L, GO:0003677, GO:0005737, GO:0006310, GO:0006313, GO:0007059, GO:0009009, GO:0009037, GO:0051301, RefSeq:WP_016931101.1, SO:0001217, UniParc:UPI0003160895, UniRef:UniRef100_UPI00313419FE, UniRef:UniRef50_Q5HP53, UniRef:UniRef90_Q4L6J7 contig_1 cds 1263177 1263617 - GCA012955505_01529 Cytosolic protein SO:0001217, UniRef:UniRef50_Q2FY75 contig_1 cds 1263711 1264442 + GCA012955505_01530 scpA Segregation and condensation protein A COG:COG1354, COG:L, GO:0005737, GO:0006260, GO:0007059, GO:0051301, KEGG:K05896, RefSeq:WP_011275717.1, SO:0001217, UniParc:UPI000054BB05, UniRef:UniRef100_Q4L6J5, UniRef:UniRef50_Q6GGK3, UniRef:UniRef90_Q4L6J5 contig_1 cds 1264435 1264974 + GCA012955505_01531 scpB SMC-Scp complex subunit ScpB COG:COG1386, COG:K, GO:0005515, GO:0005737, GO:0006260, GO:0007059, GO:0051301, GO:0051304, KEGG:K06024, RefSeq:WP_016931099.1, SO:0001217, UniParc:UPI0002E1E6F0, UniRef:UniRef100_UPI0002E1E6F0, UniRef:UniRef50_Q2FY77, UniRef:UniRef90_Q4L6J4 contig_1 cds 1264971 1265708 + GCA012955505_01532 rsuA Pseudouridine synthase COG:COG1187, COG:J, EC:5.4.99.22, KEGG:K06178, RefSeq:WP_011275719.1, SO:0001217, UniParc:UPI000054BB07, UniRef:UniRef100_A0A2A1KBA4, UniRef:UniRef50_A0A090YKY4, UniRef:UniRef90_A0A654ARK6 contig_1 cds 1265860 1266585 + GCA012955505_01533 srrA Transcriptional regulatory protein SrrA COG:COG0745, COG:TK, GO:0000156, GO:0000976, GO:0005829, GO:0006355, GO:0032993, RefSeq:WP_016931098.1, SO:0001217, UniParc:UPI00030DAE2F, UniRef:UniRef100_UPI0034D54773, UniRef:UniRef50_P35163, UniRef:UniRef90_Q2FY79 contig_1 cds 1266566 1268272 + GCA012955505_01534 srrB Sensor protein SrrB COG:COG5002, COG:T, EC:2.7.13.3, KEGG:K07651, SO:0001217, UniRef:UniRef50_Q9L523, UniRef:UniRef90_Q4L6J1 contig_1 ncRNA-region 1268421 1268547 + FMN riboswitch aptamer (RFN element) RFAM:RF00050, SO:0000035 contig_1 cds 1268612 1269154 + GCA012955505_01535 fmnP Riboflavin transporter COG:COG3601, COG:H, KEGG:K23675, RefSeq:WP_016931096.1, SO:0001217, UniParc:UPI0002F2F7E7, UniRef:UniRef100_A0A2A1KAM9, UniRef:UniRef50_E5QVT2, UniRef:UniRef90_Q4L6I9 contig_1 cds 1269226 1269474 - GCA012955505_01536 fer Ferredoxin COG:C, COG:COG1141, RefSeq:WP_002449743.1, SO:0001217, UniParc:UPI000054BB0C, UniRef:UniRef100_A0A380G0Z4, UniRef:UniRef50_P50727, UniRef:UniRef90_A0A380G0Z4 contig_1 cds 1269584 1270537 + GCA012955505_01537 ypbB Helicase Helix-turn-helix domain-containing protein COG:COG4955, COG:S, SO:0001217, UniRef:UniRef50_Q2FYE9, UniRef:UniRef90_Q4L6I7 contig_1 cds 1270530 1271846 + GCA012955505_01538 recQ ATP-dependent DNA helicase RecQ COG:COG0514, COG:L, SO:0001217, UniRef:UniRef50_A0A380G6G1, UniRef:UniRef90_Q4L6I6 contig_1 cds 1272057 1272461 + GCA012955505_01539 hypothetical protein contig_1 cds 1272424 1273002 + GCA012955505_01540 hypothetical protein contig_1 cds 1273068 1273601 + GCA012955505_01541 hypothetical protein PFAM:PF01476.26 contig_1 cds 1273736 1274722 + GCA012955505_01542 trxB Thioredoxin reductase COG:COG0492, COG:O, EC:1.8.1.-, KEGG:K26960, RefSeq:WP_011275727.1, SO:0001217, UniParc:UPI000054BB10, UniRef:UniRef100_A0A2A1K9K2, UniRef:UniRef50_A0A380G2E5, UniRef:UniRef90_A0A380G2E5 contig_1 cds 1274900 1275874 - GCA012955505_01543 ansA putative L-asparaginase COG:COG0252, COG:JE, RefSeq:WP_011275728.1, SO:0001217, UniParc:UPI000054BB11, UniRef:UniRef100_Q4L6I3, UniRef:UniRef50_K8E262, UniRef:UniRef90_Q4L6I3 contig_1 cds 1275950 1276549 + GCA012955505_01544 cmk (d)CMP kinase COG:COG0283, COG:F, EC:2.7.4.25, GO:0004127, GO:0005524, GO:0005829, GO:0006220, GO:0015949, GO:0036430, GO:0036431, SO:0001217, UniRef:UniRef50_B9DNU7, UniRef:UniRef90_Q4L6I2 contig_1 cds 1276861 1278039 + GCA012955505_01545 rpsA 30S ribosomal protein S1 COG:COG0539, COG:J, GO:0003676, GO:0003729, GO:0003735, GO:0006412, GO:0022627, RefSeq:WP_011275730.1, SO:0001217, UniParc:UPI000054BB13, UniRef:UniRef100_Q4L6I1, UniRef:UniRef50_Q4L6I1, UniRef:UniRef90_Q4L6I1 contig_1 cds 1278264 1279574 + GCA012955505_01546 der ribosome biogenesis GTPase Der COG:COG1160, COG:J, EC:3.6.5.-, GO:0003924, GO:0005525, GO:0005737, GO:0042254, GO:0043022, KEGG:K03977, RefSeq:WP_011275731.1, SO:0001217, UniParc:UPI000054BB14, UniRef:UniRef100_Q4L6I0, UniRef:UniRef50_P50743, UniRef:UniRef90_Q2FYG0 contig_1 cds 1279590 1279703 + GCA012955505_01547 hypothetical protein contig_1 cds 1279687 1280427 + GCA012955505_01548 gpsA (pseudo) NAD(P)H-dependent glycerol-3-phosphate dehydrogenase COG:C, COG:COG0240, EC:1.1.1.94, GO:0005829, GO:0005975, GO:0006650, GO:0008654, GO:0009331, GO:0046167, GO:0046168, GO:0047952, GO:0051287, SO:0001217, UniRef:UniRef50_P46919, UniRef:UniRef90_Q4L6H9 contig_1 cds 1280596 1280868 + GCA012955505_01549 hupA DNA-binding protein II HBsu COG:B, COG:COG0776, RefSeq:WP_011275733.1, SO:0001217, UniParc:UPI000054BB16, UniRef:UniRef100_A0A2A1K6U1, UniRef:UniRef50_A0A838EBI8, UniRef:UniRef90_A0A380H5H7 contig_1 cds 1280923 1281456 + GCA012955505_01550 Heptaprenyl pyrophosphate synthase subunit A EC:2.5.1.30, KEGG:K00805, SO:0001217, UniRef:UniRef50_Q2FYG4, UniRef:UniRef90_Q4L6H4 contig_1 cds 1281607 1282203 + GCA012955505_01551 menG demethylmenaquinone methyltransferase COG:COG2226, COG:HJ, EC:2.1.1.163, GO:0008168, GO:0009234, GO:0032259, GO:0043770, SO:0001217, UniRef:UniRef50_P31113, UniRef:UniRef90_Q4L6H3 contig_1 cds 1282216 1283115 + GCA012955505_01552 ispA Heptaprenyl diphosphate synthase COG:COG0142, COG:H, EC:2.5.1.30, KEGG:K24873, SO:0001217, UniRef:UniRef50_A0A0D6HKK2, UniRef:UniRef90_A0A2A1K4V0 contig_1 cds 1283263 1283712 + GCA012955505_01553 ndk nucleoside-diphosphate kinase COG:COG0105, COG:F, EC:2.7.4.6, GO:0004550, GO:0005524, GO:0005737, GO:0006183, GO:0006228, GO:0006241, GO:0046872, RefSeq:WP_011275740.1, SO:0001217, UniParc:UPI000054BB1D, UniRef:UniRef100_Q4L6H1, UniRef:UniRef50_Q6KZI4, UniRef:UniRef90_Q4L6H1 contig_1 cds 1284025 1285191 + GCA012955505_01554 aroC chorismate synthase COG:COG0082, COG:E, EC:4.2.3.5, GO:0004107, GO:0005829, GO:0008652, GO:0009073, GO:0009423, GO:0010181, KEGG:K01736, RefSeq:WP_016931255.1, SO:0001217, UniParc:UPI0002F41096, UniRef:UniRef100_UPI0002F41096, UniRef:UniRef50_P31104, UniRef:UniRef90_Q4L6H0 contig_1 cds 1285224 1286288 + GCA012955505_01555 aroB 3-dehydroquinate synthase COG:COG0337, COG:E, EC:4.2.3.4, GO:0000166, GO:0003856, GO:0005737, GO:0008652, GO:0009073, GO:0009423, GO:0046872, KEGG:K01735, RefSeq:WP_145463292.1, SO:0001217, UniParc:UPI0011A1887E, UniRef:UniRef100_UPI0011A1887E, UniRef:UniRef50_Q6GGU4, UniRef:UniRef90_Q4L6G9 contig_1 cds 1286301 1287599 + GCA012955505_01556 aroA 3-phosphoshikimate 1-carboxyvinyltransferase COG:COG0128, COG:E, EC:2.5.1.19, GO:0003866, GO:0005737, GO:0008652, GO:0009073, GO:0009423, RefSeq:WP_011275743.1, SO:0001217, UniParc:UPI000054BB20, UniRef:UniRef100_Q4L6G8, UniRef:UniRef50_Q05615, UniRef:UniRef90_Q4L6G8 contig_1 cds 1287606 1288850 + GCA012955505_01557 tadD Tetratricopeptide repeat protein COG:COG5010, COG:W, RefSeq:WP_011275744.1, SO:0001217, UniParc:UPI000054BB21, UniRef:UniRef100_Q4L6G7, UniRef:UniRef50_Q49XR9, UniRef:UniRef90_Q4L6G7 contig_1 cds 1288865 1290007 + GCA012955505_01558 hypothetical protein PFAM:PF08858.15, PFAM:PF08864.15 contig_1 cds 1290052 1290750 + GCA012955505_01559 yugP Zinc metallopeptidase COG:COG2738, COG:O, KEGG:K06973, RefSeq:WP_029376682.1, SO:0001217, UniParc:UPI00031D781E, UniRef:UniRef100_A0A2A1K8T9, UniRef:UniRef50_A0A7U7PY90, UniRef:UniRef90_Q4L6G4 contig_1 cds 1291111 1291356 - GCA012955505_01560 Transposase for ISSha1 SO:0001217, UniRef:UniRef50_Q4L8F7, UniRef:UniRef90_Q4L8F7 contig_1 cds 1291664 1291780 + GCA012955505_01561 hypothetical protein contig_1 cds 1291777 1292694 + GCA012955505_01562 bshA N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA COG:COG0438, COG:M, GO:0016757, GO:0071793, SO:0001217, UniRef:UniRef50_P42982, UniRef:UniRef90_A0A2A1K6S7 contig_1 cds 1292696 1293871 + GCA012955505_01563 cca CCA tRNA nucleotidyltransferase COG:COG0617, COG:J, EC:2.7.7.72, GO:0000049, GO:0000287, GO:0001680, GO:0005524, GO:0016779, GO:0042245, GO:0160016, SO:0001217, UniRef:UniRef50_Q49XR3, UniRef:UniRef90_Q4L6G1 contig_1 cds 1293858 1294829 + GCA012955505_01564 birA Bifunctional ligase/repressor BirA COG:COG1654, COG:K, EC:6.3.4.15, KEGG:K03524, RefSeq:WP_011275751.1, SO:0001217, UniParc:UPI000054BB28, UniRef:UniRef100_A0A2A1KA42, UniRef:UniRef50_A0A2K4AIL1, UniRef:UniRef90_A0A2A1KA42 contig_1 cds 1294862 1295335 + GCA012955505_01565 exonuclease domain-containing protein SO:0001217, UniRef:UniRef50_UPI000D4E1E72 contig_1 cds 1295395 1297506 + GCA012955505_01566 dinG 3'-5' exonuclease DinG SO:0001217, UniRef:UniRef50_A0A6A8G062 contig_1 cds 1297617 1298909 + GCA012955505_01567 asnS asparagine--tRNA ligase COG:COG0017, COG:J, EC:6.1.1.22, GO:0003676, GO:0004816, GO:0005524, GO:0005737, GO:0006421, GO:0016740, KEGG:K01893, RefSeq:WP_011275753.1, SO:0001217, UniParc:UPI000054BB2A, UniRef:UniRef100_Q4L6F8, UniRef:UniRef50_Q4L6F8, UniRef:UniRef90_Q4L6F8 contig_1 cds 1298999 1299685 + GCA012955505_01568 dnaD DNA replication protein DnaD COG:COG3935, COG:L, RefSeq:WP_011275754.1, SO:0001217, UniParc:UPI000054BB2B, UniRef:UniRef100_A0A2A1K6J6, UniRef:UniRef50_A0A2T4RL44, UniRef:UniRef90_A0A2A1K6J6 contig_1 cds 1299675 1300334 + GCA012955505_01569 nth endonuclease III COG:COG0177, COG:L, EC:4.2.99.18, GO:0006281, GO:0140078, RefSeq:WP_011275755.1, SO:0001217, UniParc:UPI000054BB2C, UniRef:UniRef100_A0A2A1K4T9, UniRef:UniRef50_P39788, UniRef:UniRef90_A0A2A1K4T9 contig_1 cds 1300339 1300668 + GCA012955505_01570 YpoC-like domain-containing protein RefSeq:WP_011275756.1, SO:0001217, UniParc:UPI000054BB2D, UniRef:UniRef100_A0A2A1K877, UniRef:UniRef50_A0A143PAF6, UniRef:UniRef90_A0A2A1K877 contig_1 cds 1300784 1303042 - GCA012955505_01571 peptidoglycan glycosyltransferase SO:0001217, UniRef:UniRef50_F4NA87, UniRef:UniRef90_A0A7Z1SEA3 contig_1 cds 1303039 1303665 - GCA012955505_01572 recU Holliday junction resolvase RecU COG:COG3331, COG:R, EC:3.1.21.10, KEGG:K03700, RefSeq:WP_016931249.1, SO:0001217, UniParc:UPI0002D500CF, UniRef:UniRef100_A0A2A1K4K7, UniRef:UniRef50_Q5HP94, UniRef:UniRef90_A0A2A1K4K7 contig_1 cds 1303970 1304188 + GCA012955505_01573 (pseudo) DUF1798 domain-containing protein SO:0001217, UniRef:UniRef50_A0A2A1K818, UniRef:UniRef90_A0A2A1K818 contig_1 cds 1304306 1304860 + GCA012955505_01574 yoqJ UPF0398 protein SH1465 COG:COG4474, COG:X, SO:0001217, UniRef:UniRef50_Q2FYI4, UniRef:UniRef90_Q4L6F1 contig_1 cds 1304871 1305209 + GCA012955505_01575 gpsB cell division regulator GpsB COG:COG3599, COG:D, GO:0005737, GO:0008360, GO:0051301, RefSeq:WP_011275761.1, SO:0001217, UniParc:UPI000054BB32, UniRef:UniRef100_Q4L6F0, UniRef:UniRef50_Q2FYI5, UniRef:UniRef90_Q4L6F0 contig_1 ncRNA 1305343 1305726 + GCA012955505_01576 RNaseP_bact_b Bacterial RNase P class B RFAM:RF00011, SO:0000386 contig_1 cds 1305843 1306976 + GCA012955505_01577 rlmL THUMP domain-containing protein COG:COG0116, COG:J, RefSeq:WP_037558748.1, SO:0001217, UniParc:UPI000452671F, UniRef:UniRef100_A0A2A1K6I3, UniRef:UniRef50_P50840, UniRef:UniRef90_Q4L6E9 contig_1 cds 1307142 1307780 + GCA012955505_01578 ywnB NAD-dependent dehydratase COG:COG2910, COG:R, RefSeq:WP_011275763.1, SO:0001217, UniParc:UPI000054BB34, UniRef:UniRef100_A0A2A1K4J1, UniRef:UniRef50_A0A7U7JRP4, UniRef:UniRef90_A0A2A1K4J1 contig_1 cds 1308176 1311115 + GCA012955505_01579 era Dynamin N-terminal domain-containing protein COG:COG1159, COG:J, SO:0001217, UniRef:UniRef50_K9B117, UniRef:UniRef90_Q4L6E7 contig_1 cds 1311132 1312010 + GCA012955505_01580 exoIX 5'-3' exonuclease domain-containing protein COG:COG0258, COG:L, RefSeq:WP_016931246.1, SO:0001217, UniParc:UPI00030CAA73, UniRef:UniRef100_A0A2A1K789, UniRef:UniRef50_A0A380G7N4, UniRef:UniRef90_Q4L6E6 contig_1 cds 1312384 1315707 + GCA012955505_01581 YSIRK-type signal peptide-containing protein SO:0001217, UniRef:UniRef50_UPI00069FCB93, UniRef:UniRef90_UPI00069FCB93 contig_1 cds 1315919 1318435 + GCA012955505_01582 Gram-positive cocci surface proteins LPxTG domain-containing protein SO:0001217, UniRef:UniRef50_Q4L6E4, UniRef:UniRef90_UPI0012B17396 contig_1 cds 1318407 1319324 + GCA012955505_01583 YSIRK signal domain/LPXTG anchor domain surface protein SO:0001217, UniRef:UniRef50_A0A6A8UJR4, UniRef:UniRef90_UPI0034DD2C8D contig_1 cds 1319335 1321407 + GCA012955505_01584 YSIRK-type signal peptide-containing protein SO:0001217, UniRef:UniRef50_UPI00214D797D contig_1 cds 1321361 1321897 + GCA012955505_01585 Bacterial Ig domain-containing protein SO:0001217, UniRef:UniRef50_E9DQV1 contig_1 cds 1321924 1322889 + GCA012955505_01586 YSIRK-type signal peptide-containing protein SO:0001217, UniRef:UniRef50_UPI0028FF2CBD, UniRef:UniRef90_UPI0028FF2CBD contig_1 cds 1322914 1323756 + GCA012955505_01587 YSIRK signal domain/LPXTG anchor domain surface protein SO:0001217, UniRef:UniRef50_A0A6A8UJR4 contig_1 cds 1323993 1324757 + GCA012955505_01588 Gram-positive cocci surface proteins LPxTG domain-containing protein RefSeq:WP_234448497.1, SO:0001217, UniParc:UPI000AD53DFD, UniRef:UniRef100_UPI001F0C3A44, UniRef:UniRef50_Q4L6E4, UniRef:UniRef90_Q4L6E4 contig_1 ncRNA 1324874 1325069 - GCA012955505_01589 tsr24 S. aureus tsr24 small RNA RFAM:RF02577, SO:0000655 contig_1 cds 1325076 1325402 - GCA012955505_01590 Ribonuclease HI SO:0001217, UniRef:UniRef50_A0A380E1I6 contig_1 cds 1325521 1326225 - GCA012955505_01591 yhhQ queuosine precursor transporter COG:COG1738, COG:J, GO:1990397, KEGG:K09125, RefSeq:WP_011275769.1, SO:0001217, UniParc:UPI000054BB39, UniRef:UniRef100_Q4L6E2, UniRef:UniRef50_A0A380CFB3, UniRef:UniRef90_A0A380G1V1 contig_1 cds 1326637 1326888 + GCA012955505_01592 Scaffolding protein RefSeq:WP_011275771.1, SO:0001217, UniParc:UPI000054BB3B, UniRef:UniRef100_A0A2A1K8V4, UniRef:UniRef50_A0A0U1E823, UniRef:UniRef90_A0A2A1K8V4 contig_1 cds 1326913 1328025 + GCA012955505_01593 cvfC Conserved virulence factor C COG:COG1413, COG:R, GO:0016491, RefSeq:WP_011275772.1, SO:0001217, UniParc:UPI000054BB3C, UniRef:UniRef100_Q4L6D9, UniRef:UniRef50_Q49XP0, UniRef:UniRef90_Q4L6D9 contig_1 cds 1328062 1328496 + GCA012955505_01594 Bacilliredoxin SH1478 GO:0045454, KEGG:K26958, RefSeq:WP_011275773.1, SO:0001217, UniParc:UPI000054BB3D, UniRef:UniRef100_Q4L6D8, UniRef:UniRef50_Q2FYK4, UniRef:UniRef90_Q4L6D8 contig_1 cds 1328733 1329665 + GCA012955505_01595 thyA thymidylate synthase COG:COG0207, COG:F, EC:2.1.1.45, GO:0004799, GO:0005829, GO:0006231, GO:0006235, GO:0032259, KEGG:K00560, SO:0001217, UniRef:UniRef50_P00469, UniRef:UniRef90_Q4L6D7 contig_1 cds 1329726 1330205 + GCA012955505_01596 Dihydrofolate reductase RefSeq:WP_011275775.1, SO:0001217, UniParc:UPI000054BB3F, UniRef:UniRef100_A0A2A1K847, UniRef:UniRef90_A0A380G1W7 contig_1 cds 1330232 1331077 + GCA012955505_01597 fakB2 fatty acid kinase binding subunit FakB2 BlastRules:WP_000166059, COG:COG1307, COG:I, RefSeq:WP_011275776.1, SO:0001217, UniParc:UPI000054BB40, UniRef:UniRef100_A0A2A1KAR4, UniRef:UniRef50_Q8NWR0, UniRef:UniRef90_A0A2A1KAR4 contig_1 cds 1331191 1331718 + GCA012955505_01598 msrA Peptide methionine sulfoxide reductase MsrA COG:COG0225, COG:O, RefSeq:WP_011275777.1, SO:0001217, UniParc:UPI000054BB41, UniRef:UniRef100_A0A2A1K5J6, UniRef:UniRef50_P0A086, UniRef:UniRef90_A0A2K0A826 contig_1 cds 1331711 1332139 + GCA012955505_01599 msrB Peptide methionine sulfoxide reductase MsrB COG:COG0229, COG:O, EC:1.8.4.12, GO:0005737, GO:0006979, GO:0030091, GO:0033743, RefSeq:WP_011275778.1, SO:0001217, UniParc:UPI000054BB42, UniRef:UniRef100_Q4L6D3, UniRef:UniRef50_P0A088, UniRef:UniRef90_Q4L6D3 contig_1 cds 1332152 1332652 + GCA012955505_01600 nagE PTS system glucose-specific EIIA component COG:COG2190, COG:G, RefSeq:WP_011275779.1, SO:0001217, UniParc:UPI000054BB43, UniRef:UniRef100_Q4L6D2, UniRef:UniRef50_Q81JY0, UniRef:UniRef90_A0A380G147 contig_1 cds 1332652 1332873 + GCA012955505_01601 yozE UPF0346 protein SH1485 COG:COG4479, COG:S, RefSeq:WP_011275780.1, SO:0001217, UniParc:UPI000054BB44, UniRef:UniRef100_Q4L6D1, UniRef:UniRef50_Q2FYL1, UniRef:UniRef90_Q4L6D1 contig_1 cds 1333152 1334480 + GCA012955505_01602 ctpA putative CtpA-like serine protease COG:COG0793, COG:O, EC:3.4.21.-, GO:0004175, GO:0005886, GO:0006508, GO:0007165, GO:0008236, GO:0030288, SO:0001217, UniRef:UniRef50_Q4L6D0, UniRef:UniRef90_Q4L6D0 contig_1 cds 1334516 1335019 + GCA012955505_01603 rimL N-acetyltransferase COG:COG1670, COG:JO, RefSeq:WP_011275782.1, SO:0001217, UniParc:UPI000054BB46, UniRef:UniRef100_A0A2A1K5L5, UniRef:UniRef50_Q2FYL4, UniRef:UniRef90_A0A2A1K5L5 contig_1 cds 1335038 1336105 + GCA012955505_01604 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase COG:COG0707, COG:M, EC:2.4.1.227, GO:0005886, GO:0005975, GO:0008360, GO:0009252, GO:0030259, GO:0050511, GO:0051301, GO:0051991, GO:0071555, KEGG:K02563, RefSeq:WP_011275783.1, SO:0001217, UniParc:UPI000054BB47, UniRef:UniRef100_Q4L6C8, UniRef:UniRef50_Q2FYL5, UniRef:UniRef90_Q4L6C8 contig_1 ncRNA 1335566 1335740 - GCA012955505_01605 S414 Staphylococcus sRNA 414 RFAM:RF02895, SO:0000655 contig_1 cds 1336124 1336747 + GCA012955505_01606 pgpB Phosphatidic acid phosphatase type 2/haloperoxidase domain-containing protein COG:COG0671, COG:I, RefSeq:WP_016931301.1, SO:0001217, UniParc:UPI0002D8AA1C, UniRef:UniRef100_A0A2A1K7Z3, UniRef:UniRef50_Q2FYL6, UniRef:UniRef90_Q4L6C7 contig_1 ncRNA 1337154 1337346 - GCA012955505_01607 tsr25 S. aureus tsr25 small RNA RFAM:RF02578, SO:0000655 contig_1 cds 1337486 1338145 + GCA012955505_01608 arlR Response regulator ArlR COG:COG0745, COG:TK, GO:0000156, GO:0000976, GO:0005829, GO:0006355, GO:0032993, KEGG:K18941, RefSeq:WP_011275785.1, SO:0001217, UniParc:UPI000054BB49, UniRef:UniRef100_Q4L6C6, UniRef:UniRef50_Q49XM7, UniRef:UniRef90_Q4L6C6 contig_1 cds 1338142 1339503 + GCA012955505_01609 arlS Signal transduction histidine-protein kinase ArlS COG:COG5002, COG:T, EC:2.7.13.3, GO:0000155, GO:0005524, GO:0005886, KEGG:K18940, RefSeq:WP_016931300.1, SO:0001217, UniParc:UPI00030ED39B, UniRef:UniRef100_UPI00030ED39B, UniRef:UniRef50_Q9KJN3, UniRef:UniRef90_Q4L6C5 contig_1 cds 1339786 1342590 + GCA012955505_01610 odhA 2-oxoglutarate dehydrogenase E1 component COG:C, COG:COG0567, EC:1.2.4.2, GO:0004591, GO:0005829, GO:0006096, GO:0006099, GO:0030976, GO:0045252, SO:0001217, UniRef:UniRef50_P0C601, UniRef:UniRef90_Q4L6C4 contig_1 cds 1342606 1343877 + GCA012955505_01611 sucB dihydrolipoyllysine-residue succinyltransferase COG:C, COG:COG0508, EC:2.3.1.61, GO:0004149, GO:0005829, GO:0006099, GO:0033512, GO:0045252, SO:0001217, UniRef:UniRef50_Q2FYM2, UniRef:UniRef90_Q4L6C3 contig_1 cds 1344074 1344286 + GCA012955505_01612 hypothetical protein RefSeq:WP_011275790.1, SO:0001217, UniParc:UPI000054BB4E, UniRef:UniRef100_A0A2A1KAV5, UniRef:UniRef50_A0A2A1KAV5, UniRef:UniRef90_A0A2A1KAV5 contig_1 cds 1344653 1345459 + GCA012955505_01613 Lactoylglutathione lyase RefSeq:WP_011275792.1, SO:0001217, UniParc:UPI000054BB50, UniRef:UniRef100_A0A2A1K9H7, UniRef:UniRef50_A0A6N3AGB1, UniRef:UniRef90_A0A2A1K9H7 contig_1 cds 1345490 1345699 + GCA012955505_01614 yozC YozC SO:0001217, UniParc:UPI000054BB51, UniRef:UniRef100_Q4L6B7, UniRef:UniRef50_A0A5R9B5B5, UniRef:UniRef90_Q4L6B7 contig_1 cds 1345845 1346636 + GCA012955505_01615 mMP0363 putative protein SH1500 COG:COG0714, COG:R, GO:0005524, GO:0016887, RefSeq:WP_011275794.1, SO:0001217, UniParc:UPI000054BB52, UniRef:UniRef100_Q4L6B6, UniRef:UniRef50_Q49XL1, UniRef:UniRef90_Q4L6B6 contig_1 cds 1346649 1348493 + GCA012955505_01616 norD Nitric oxide reductase activation protein NorD COG:COG4548, COG:P, SO:0001217, UniRef:UniRef50_A0A380G8L3, UniRef:UniRef90_A0A380G1K8 contig_1 cds 1348634 1349977 + GCA012955505_01617 brnQ branched-chain amino acid transport system II carrier protein COG:COG1114, COG:E, GO:0005304, GO:0005886, GO:0015188, GO:0015190, GO:0015658, GO:0015803, GO:0015818, GO:0015820, GO:0016020, KEGG:K03311, RefSeq:WP_049394697.1, SO:0001217, UniParc:UPI00066B9546, UniRef:UniRef100_UPI00066B9546, UniRef:UniRef50_Q2FYM4, UniRef:UniRef90_Q4L6B4 contig_1 ncRNA 1350065 1350290 - GCA012955505_01618 tsr24 S. aureus tsr24 small RNA RFAM:RF02577, SO:0000655 contig_1 cds 1350304 1350504 + GCA012955505_01619 hypothetical protein SO:0001217, UniRef:UniRef50_UPI0008A61F99 contig_1 cds 1350505 1351674 - GCA012955505_01620 yaaN TelA-like protein SH1505 COG:COG3853, COG:V, RefSeq:WP_011275798.1, SO:0001217, UniParc:UPI000054BB56, UniRef:UniRef100_Q4L6B1, UniRef:UniRef50_Q49XK7, UniRef:UniRef90_Q4L6B1 contig_1 cds 1351701 1352327 - GCA012955505_01621 xpaC 5-bromo-4-chloroindolyl phosphate hydrolase COG:COG4915, COG:QR, RefSeq:WP_011275799.1, SO:0001217, UniParc:UPI000054BB57, UniRef:UniRef100_A0A2A1K873, UniRef:UniRef50_K9AM25, UniRef:UniRef90_A0A2A1K873 contig_1 cds 1352349 1352618 - GCA012955505_01622 acyP acylphosphatase COG:C, COG:COG1254, EC:3.6.1.7, GO:0003998, GO:0008270, GO:0016743, GO:0051604, RefSeq:WP_011275800.1, SO:0001217, UniParc:UPI000054BB58, UniRef:UniRef100_Q4L6A9, UniRef:UniRef50_Q4L6A9, UniRef:UniRef90_Q4L6A9 contig_1 cds 1352999 1353199 + GCA012955505_01623 cspA cold shock protein CspA BlastRules:WP_000809131, COG:COG1278, COG:K, GO:0003676, GO:0005737, KEGG:K03704, RefSeq:WP_002433901.1, SO:0001217, UniParc:UPI000054BB5A, UniRef:UniRef100_Q4L6A7, UniRef:UniRef50_P42016, UniRef:UniRef90_Q2FYN2 contig_1 cds 1353514 1353678 - GCA012955505_01624 hypothetical protein contig_1 cds 1353785 1355092 - GCA012955505_01625 lysA diaminopimelate decarboxylase EC:4.1.1.20, GO:0008836, GO:0009089, KEGG:K01586, SO:0001217, UniRef:UniRef50_Q5HG20, UniRef:UniRef90_UPI00069E932F contig_1 cds 1355094 1356170 - GCA012955505_01626 alr Alanine racemase COG:COG0787, COG:M, RefSeq:WP_011275804.1, SO:0001217, UniParc:UPI000054BB5D, UniRef:UniRef100_A0A640MW80, UniRef:UniRef50_Q9EZ08, UniRef:UniRef90_A0A2K0A852 contig_1 cds 1356177 1357331 - GCA012955505_01627 abgB putative hydrolase SH1513 COG:COG1473, COG:R, EC:3.-.-.-, GO:0016787, SO:0001217, UniRef:UniRef50_Q2FYN6, UniRef:UniRef90_Q4L6A3 contig_1 cds 1357608 1358327 - GCA012955505_01628 dapD 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase COG:COG2171, COG:E, EC:2.3.1.89, GO:0009089, GO:0019877, GO:0047200, KEGG:K05822, RefSeq:WP_011275806.1, SO:0001217, UniParc:UPI000054BB5F, UniRef:UniRef100_Q4L6A2, UniRef:UniRef50_A8F8L8, UniRef:UniRef90_Q4L6A2 contig_1 cds 1358367 1359092 - GCA012955505_01629 dapB 4-hydroxy-tetrahydrodipicolinate reductase COG:COG0289, COG:E, EC:1.17.1.8, GO:0005829, GO:0008839, GO:0009089, GO:0016726, GO:0019877, GO:0050661, GO:0051287, KEGG:K00215, RefSeq:WP_011275807.1, SO:0001217, UniParc:UPI000054BB60, UniRef:UniRef100_Q4L6A1, UniRef:UniRef50_Q9EZ11, UniRef:UniRef90_Q4L6A1 contig_1 cds 1359092 1359976 - GCA012955505_01630 dapA 4-hydroxy-tetrahydrodipicolinate synthase COG:COG0329, COG:EM, EC:4.3.3.7, GO:0005829, GO:0008840, GO:0009089, GO:0019877, RefSeq:WP_011275808.1, SO:0001217, UniParc:UPI000054BB61, UniRef:UniRef100_Q4L6A0, UniRef:UniRef50_Q6GH13, UniRef:UniRef90_Q4L6A0 contig_1 cds 1359978 1360967 - GCA012955505_01631 asd aspartate-semialdehyde dehydrogenase COG:COG0136, COG:E, EC:1.2.1.11, GO:0004073, GO:0008652, GO:0016620, GO:0051287, KEGG:K00133, RefSeq:WP_011275809.1, SO:0001217, UniParc:UPI000054BB62, UniRef:UniRef100_A0A640MW60, UniRef:UniRef50_A0A2T4PUK5, UniRef:UniRef90_A0A640MW60 contig_1 cds 1361033 1362235 - GCA012955505_01632 metL1 aspartate kinase COG:COG0527, COG:E, EC:2.7.2.4, RefSeq:WP_037570764.1, SO:0001217, UniParc:UPI0004A8F569, UniRef:UniRef100_A0A640N0J3, UniRef:UniRef50_B9EBZ4, UniRef:UniRef90_Q4L698 contig_1 ncRNA-region 1362317 1362493 - Lysine riboswitch aptamer RFAM:RF00168, SO:0000035 contig_1 cds 1362689 1364293 - GCA012955505_01633 uup ABC transporter domain-containing protein COG:COG0488, COG:R, RefSeq:WP_011275812.1, SO:0001217, UniParc:UPI000054BB65, UniRef:UniRef100_A0A640MVZ1, UniRef:UniRef50_R5Y8E8, UniRef:UniRef90_S2YJP1 contig_1 cds 1364447 1365346 + GCA012955505_01634 cvfB RNA-binding virulence regulatory protein CvfB BlastRules:WP_001095445, BlastRules:WP_001162352, COG:COG2996, COG:R, KEGG:K00243, RefSeq:WP_037558084.1, SO:0001217, UniParc:UPI00044FF9C7, UniRef:UniRef100_A0A640N1A2, UniRef:UniRef50_Q2FYP3, UniRef:UniRef90_Q4L695 contig_1 cds 1365574 1366524 + GCA012955505_01635 pstS Phosphate-binding protein PstS COG:COG0226, COG:P, GO:0005886, GO:0006817, GO:0042301, RefSeq:WP_033080051.1, SO:0001217, UniParc:UPI00044E51D7, UniRef:UniRef100_A0A640MVW1, UniRef:UniRef50_Q49XJ1, UniRef:UniRef90_Q4L694 contig_1 cds 1366685 1367599 + GCA012955505_01636 pstC phosphate ABC transporter permease subunit PstC COG:COG0573, COG:P, GO:0005886, GO:0006817, GO:0015415, GO:0055052, SO:0001217, UniRef:UniRef50_A0A235FA99, UniRef:UniRef90_A0A533IWU3 contig_1 cds 1367601 1368521 + GCA012955505_01637 pstA phosphate ABC transporter permease PstA COG:COG0581, COG:P, GO:0005886, GO:0006817, GO:0015415, GO:0055052, RefSeq:WP_011275816.1, SO:0001217, UniParc:UPI000054BB69, UniRef:UniRef100_A0A640N0H5, UniRef:UniRef50_B9E6T5, UniRef:UniRef90_A0A380G1N9 contig_1 cds 1368632 1369507 + GCA012955505_01638 pstB phosphate ABC transporter ATP-binding protein PstB COG:COG1117, COG:P, EC:7.3.2.1, GO:0005524, GO:0005886, GO:0006817, GO:0009898, GO:0015415, GO:0016887, GO:0035435, GO:0055052, RefSeq:WP_011275817.1, SO:0001217, UniParc:UPI000054BB6A, UniRef:UniRef100_Q4L691, UniRef:UniRef50_Q2FYQ0, UniRef:UniRef90_Q4L691 contig_1 cds 1369517 1370161 + GCA012955505_01639 phoU phosphate signaling complex protein PhoU COG:COG0704, COG:P, GO:0006817, GO:0030643, GO:0045936, SO:0001217, UniParc:UPI000054BB6B, UniRef:UniRef100_A0A640N183, UniRef:UniRef50_A0A4R6BXI3, UniRef:UniRef90_A0A640N183 contig_1 cds 1370493 1372304 - GCA012955505_01640 pepF oligoendopeptidase F COG:COG1164, COG:E, EC:3.4.24.-, GO:0004222, GO:0006508, KEGG:K08602, RefSeq:WP_136719844.1, SO:0001217, UniParc:UPI0010AC7841, UniRef:UniRef100_UPI0010AC7841, UniRef:UniRef50_A0A7X9ZKX9, UniRef:UniRef90_A0A2K0A868 contig_1 cds 1372475 1372882 + GCA012955505_01641 Permease SO:0001217, UniRef:UniRef50_A0A3A0VJ57 contig_1 cds 1372889 1373905 - GCA012955505_01642 ceuA Fe/B12 periplasmic-binding domain-containing protein COG:COG4607, COG:P, RefSeq:WP_053021278.1, SO:0001217, UniParc:UPI00069EE850, UniRef:UniRef100_UPI00069EE850, UniRef:UniRef50_Q4L687, UniRef:UniRef90_Q4L687 contig_1 cds 1374142 1374675 - GCA012955505_01643 HAD family hydrolase SO:0001217, UniRef:UniRef50_UPI001F0A0E6F contig_1 cds 1375487 1376746 - GCA012955505_01644 femB Methicillin resistance protein FemB COG:COG2348, COG:M, EC:2.3.2.18, KEGG:K11695, RefSeq:WP_011275823.1, SO:0001217, UniParc:UPI00000B5776, UniRef:UniRef100_A0A640N159, UniRef:UniRef50_Q2FYR1, UniRef:UniRef90_A0A380G190 contig_1 cds 1376764 1377999 - GCA012955505_01645 femA Aminoacyltransferase FemA COG:COG2348, COG:M, EC:2.3.2.17, KEGG:K11694, SO:0001217, UniRef:UniRef50_Q2FYR2, UniRef:UniRef90_Q4L684 contig_1 cds 1378238 1378558 + GCA012955505_01646 DUF4440 domain-containing protein COG:COG4994, COG:S, RefSeq:WP_016931085.1, SO:0001217, UniParc:UPI0002DC9610, UniRef:UniRef100_A0A640MWI3, UniRef:UniRef50_Q4L681, UniRef:UniRef90_Q4L681 contig_1 cds 1378555 1379286 - GCA012955505_01647 trpA tryptophan synthase subunit alpha COG:COG0159, COG:E, EC:4.2.1.20, GO:0000162, GO:0004834, GO:0005829, GO:0006568, KEGG:K01695, RefSeq:WP_011275827.1, SO:0001217, UniParc:UPI000054BB73, UniRef:UniRef100_Q4L680, UniRef:UniRef50_Q2FYR3, UniRef:UniRef90_Q4L680 contig_1 cds 1379279 1380490 - GCA012955505_01648 trpB tryptophan synthase subunit beta COG:COG0133, COG:E, EC:4.2.1.20, GO:0000162, GO:0004834, RefSeq:WP_011275828.1, SO:0001217, UniParc:UPI000054BB74, UniRef:UniRef100_A0A640MVU5, UniRef:UniRef50_B0TP63, UniRef:UniRef90_A0A640MVU5 contig_1 cds 1380492 1381118 - GCA012955505_01649 trpF phosphoribosylanthranilate isomerase COG:COG0135, COG:E, EC:5.3.1.24, GO:0000162, GO:0004640, GO:0006568, RefSeq:WP_011275829.1, SO:0001217, UniParc:UPI000054BB75, UniRef:UniRef100_Q4L678, UniRef:UniRef50_Q2FYR5, UniRef:UniRef90_Q4L678 contig_1 cds 1381115 1381681 - GCA012955505_01650 Indole-3-glycerol phosphate synthase SO:0001217, UniRef:UniRef50_A0A2X2M8X9 contig_1 cds 1381717 1381848 - GCA012955505_01651 hypothetical protein contig_1 cds 1381832 1382848 - GCA012955505_01652 trpD Anthranilate phosphoribosyltransferase COG:COG0547, COG:E, EC:2.4.2.18, GO:0000162, GO:0000287, GO:0004048, GO:0005829, KEGG:K00766, RefSeq:WP_011275831.1, SO:0001217, UniParc:UPI000054BB77, UniRef:UniRef100_Q4L676, UniRef:UniRef50_Q2FYR7, UniRef:UniRef90_Q4L676 contig_1 cds 1382823 1383422 - GCA012955505_01653 pabA Glutamine amidotransferase COG:COG0512, COG:EH, RefSeq:WP_011275832.1, SO:0001217, UniParc:UPI000054BB78, UniRef:UniRef100_A0A640N0B6, UniRef:UniRef50_B9DP49, UniRef:UniRef90_A0A2K0A867 contig_1 cds 1383419 1384828 - GCA012955505_01654 trpE anthranilate synthase component I COG:COG0147, COG:EH, EC:4.1.3.27, KEGG:K01657, RefSeq:WP_011275833.1, SO:0001217, UniParc:UPI000054BB79, UniRef:UniRef100_A0A640MVS6, UniRef:UniRef50_A0A6N3A4A0, UniRef:UniRef90_A0A2K0A876 contig_1 cds 1385331 1386368 - GCA012955505_01655 frvX Aminopeptidase COG:COG1363, COG:EG, EC:3.4.11.-, KEGG:K01269, RefSeq:WP_011275834.1, SO:0001217, UniParc:UPI000054BB7A, UniRef:UniRef100_A0A640N122, UniRef:UniRef50_O07603, UniRef:UniRef90_A0A2K0A866 contig_1 cds 1386538 1387599 + GCA012955505_01656 tyrA prephenate dehydrogenase COG:COG0287, COG:E, EC:1.3.1.12, GO:0004665, GO:0006571, GO:0008977, GO:0070403, SO:0001217, UniRef:UniRef50_Q2FYS1, UniRef:UniRef90_Q4L672 contig_1 cds 1387673 1388935 - GCA012955505_01657 dinP DNA-damage repair protein COG:COG0389, COG:L, RefSeq:WP_011275836.1, SO:0001217, UniParc:UPI000054BB7C, UniRef:UniRef100_A0A640MWE4, UniRef:UniRef50_A0A6N3A9E1, UniRef:UniRef90_A0A380G212 contig_1 cds 1389088 1389276 + GCA012955505_01658 pptA 2-hydroxymuconate tautomerase COG:COG1942, COG:Q, EC:5.3.2.-, EC:5.3.2.6, GO:0008152, GO:0016853, GO:0016862, RefSeq:WP_011275837.1, SO:0001217, UniParc:UPI000054BB7D, UniRef:UniRef100_Q4L670, UniRef:UniRef50_Q814P5, UniRef:UniRef90_Q4L670 contig_1 cds 1389364 1390341 - GCA012955505_01659 msrR Regulatory protein MsrR COG:COG1316, COG:M, RefSeq:WP_011275838.1, SO:0001217, UniParc:UPI000054BB7E, UniRef:UniRef100_A0A640MVQ7, UniRef:UniRef50_Q7BHL7, UniRef:UniRef90_A0A640MVQ7 contig_1 cds 1390488 1390994 + GCA012955505_01660 msrA Peptide methionine sulfoxide reductase MsrA COG:COG0225, COG:O, RefSeq:WP_011275839.1, SO:0001217, UniParc:UPI000054BB7F, UniRef:UniRef100_A0A640MVE6, UniRef:UniRef50_P0A084, UniRef:UniRef90_A0A640MVE6 contig_1 cds 1391068 1393479 - GCA012955505_01661 Phosphatidylglycerol lysyltransferase SO:0001217, UniRef:UniRef50_Q2G2M2 contig_1 cds 1393721 1394794 - GCA012955505_01662 perM AI-2E family transporter COG:COG0628, COG:R, SO:0001217, UniRef:UniRef50_S2XJ07, UniRef:UniRef90_Q4L666 contig_1 cds 1394794 1395642 - GCA012955505_01663 glcT glucose PTS transporter transcription antiterminator GlcT COG:COG3711, COG:K, GO:0003723, GO:0045893, KEGG:K03480, SO:0001217, UniRef:UniRef50_O33618, UniRef:UniRef90_Q4L665 contig_1 cds 1395801 1397258 - GCA012955505_01664 alsT Alanine:cation symporter family protein COG:COG1115, COG:E, KEGG:K03310, RefSeq:WP_011275843.1, SO:0001217, UniParc:UPI000054BB83, UniRef:UniRef100_A0A2S6DZF6, UniRef:UniRef50_A0A078M5B3, UniRef:UniRef90_A0A2S6DZF6 contig_1 cds 1397475 1399874 - GCA012955505_01665 parC DNA topoisomerase IV subunit A COG:COG0188, COG:L, EC:5.6.2.2, GO:0003677, GO:0003918, GO:0005524, GO:0005694, GO:0006265, RefSeq:WP_016931080.1, SO:0001217, UniParc:UPI0002F154A3, UniRef:UniRef100_UPI0002F154A3, UniRef:UniRef50_P72525, UniRef:UniRef90_A0A640MV99 contig_1 cds 1399871 1400149 - GCA012955505_01666 hypothetical protein contig_1 cds 1400245 1400841 - GCA012955505_01667 toprim domain-containing protein SO:0001217, UniRef:UniRef50_A1DRK9, UniRef:UniRef90_UPI00211B2872 contig_1 cds 1400882 1401799 - GCA012955505_01668 ATP-binding protein SO:0001217, UniRef:UniRef50_A5LIH1, UniRef:UniRef90_UPI002904C826 contig_1 cds 1402002 1402610 + GCA012955505_01669 plsY glycerol-3-phosphate 1-O-acyltransferase PlsY COG:COG0344, COG:I, EC:2.3.1.15, EC:2.3.1.275, GO:0005886, GO:0006654, GO:0008374, GO:0008654, GO:0043772, KEGG:K08591, RefSeq:WP_011275846.1, SO:0001217, UniParc:UPI000054BB86, UniRef:UniRef100_Q4L661, UniRef:UniRef50_Q2FYS6, UniRef:UniRef90_Q4L661 contig_1 cds 1402777 1403052 + GCA012955505_01670 yneR putative protein SH1556 COG:COG4841, COG:S, SO:0001217, UniRef:UniRef50_Q2FYS7, UniRef:UniRef90_Q4L660 contig_1 cds 1403312 1403782 - GCA012955505_01671 menI 1,4-dihydroxy-2-naphthoyl-CoA hydrolase MenI COG:COG0824, COG:I, EC:3.1.2.-, EC:3.1.2.28, GO:0009234, KEGG:K07107, RefSeq:WP_011275848.1, SO:0001217, UniParc:UPI000054BB88, UniRef:UniRef100_A0A640MVT1, UniRef:UniRef50_Q2FYS8, UniRef:UniRef90_A0A640MVT1 contig_1 cds 1403877 1406576 - GCA012955505_01672 acnA aconitate hydratase AcnA COG:C, COG:COG1048, EC:4.2.1.3, EC:4.2.1.99, GO:0003994, GO:0006099, KEGG:K27802, SO:0001217, UniRef:UniRef50_Q54X73, UniRef:UniRef90_A0A5B2Z2U0 contig_1 cds 1406713 1408350 - GCA012955505_01673 BCCT family transporter RefSeq:WP_037570793.1, SO:0001217, UniParc:UPI0004A93D7D, UniRef:UniRef100_A0A640MVL7, UniRef:UniRef50_A0A1D4R1U3, UniRef:UniRef90_A0A2K0A8C1 contig_1 cds 1408540 1408893 + GCA012955505_01674 mscL large conductance mechanosensitive channel protein MscL COG:COG1970, COG:M, GO:0005886, GO:0008381, RefSeq:WP_033080045.1, SO:0001217, UniParc:UPI0004A8AB9E, UniRef:UniRef100_A0A640N0W6, UniRef:UniRef50_P68805, UniRef:UniRef90_Q4L656 contig_1 cds 1408948 1409412 - GCA012955505_01675 SbcC/MukB-like Walker B domain-containing protein SO:0001217, UniRef:UniRef50_UPI000F6FD505 contig_1 cds 1409592 1410260 - GCA012955505_01676 Nuclease SbcCD subunit C SO:0001217, UniRef:UniRef50_A0A380EHD7 contig_1 cds 1410573 1411295 - GCA012955505_01677 Nuclease SbcCD subunit D SO:0001217, UniRef:UniRef50_A0A380DZ78 contig_1 cds 1411653 1411904 - GCA012955505_01678 Membrane protein SO:0001217, UniRef:UniRef50_A0A380DTI4 contig_1 cds 1412026 1412280 - GCA012955505_01679 yneF UPF0154 protein SH1564 COG:COG3763, COG:S, GO:0005886, KEGG:K09976, SO:0001217, UniParc:UPI0002E94D29, UniRef:UniRef100_Q4L652, UniRef:UniRef50_P67288, UniRef:UniRef90_Q4L652 contig_1 cds 1412489 1413583 - GCA012955505_01680 tkt (pseudo) transketolase COG:COG0021, COG:G, EC:2.2.1.1, GO:0004802, KEGG:K00615, SO:0001217, UniRef:UniRef50_A0A0I9QGZ2, UniRef:UniRef90_A0A3S7GSU7 contig_1 cds 1413577 1414077 - GCA012955505_01681 hypothetical protein PFAM:PF00456.26 contig_1 cds 1414769 1414978 - GCA012955505_01682 hypothetical protein contig_1 cds 1415055 1415678 + GCA012955505_01683 lexA transcriptional repressor LexA COG:COG1974, COG:KT, EC:3.4.21.88, GO:0003677, GO:0004252, GO:0006260, GO:0006281, GO:0006508, GO:0009432, GO:0045892, KEGG:K01356, RefSeq:WP_011275859.1, SO:0001217, UniParc:UPI000054BB93, UniRef:UniRef100_Q4L648, UniRef:UniRef50_Q81A92, UniRef:UniRef90_Q2FYU1 contig_1 cds 1415842 1416867 - GCA012955505_01684 ykwD Secretion protein COG:COG2340, COG:DR, RefSeq:WP_016931076.1, SO:0001217, UniParc:UPI000362397E, UniRef:UniRef100_A0A7Z1N8H3, UniRef:UniRef50_Q49XD3, UniRef:UniRef90_A0A2A1KCB2 contig_1 cds 1416882 1417859 - GCA012955505_01685 GMP reductase RefSeq:WP_016931075.1, SO:0001217, UniParc:UPI00030AD4DC, UniRef:UniRef100_A0A640N016, UniRef:UniRef90_Q4L646 contig_1 cds 1418006 1418275 - GCA012955505_01686 rpsN 30S ribosomal protein S14 COG:COG0199, COG:J, GO:0003735, GO:0005737, GO:0005840, GO:0006412, GO:0015935, GO:0019843, RefSeq:WP_011275862.1, SO:0001217, UniParc:UPI000054BB96, UniRef:UniRef100_Q4L645, UniRef:UniRef50_Q5HPK6, UniRef:UniRef90_Q5HPK6 contig_1 cds 1418454 1418603 - GCA012955505_01687 rpmG 50S ribosomal protein L33 COG:COG0267, COG:J, GO:0003735, GO:0005737, GO:0005840, GO:0006412, GO:1990904, KEGG:K02913, RefSeq:WP_001265708.1, SO:0001217, UniParc:UPI0000132FC6, UniRef:UniRef100_Q2FYU6, UniRef:UniRef50_Q2FYU6, UniRef:UniRef90_Q2FYU6 contig_1 cds 1418696 1420207 - GCA012955505_01688 katA Catalase COG:COG0753, COG:P, EC:1.11.1.6, GO:0004096, GO:0005737, GO:0020037, GO:0042542, GO:0042744, GO:0046872, RefSeq:WP_016931074.1, SO:0001217, UniParc:UPI0002F878D6, UniRef:UniRef100_A0A2A1KCQ5, UniRef:UniRef50_O52762, UniRef:UniRef90_Q5HPK8 contig_1 cds 1420421 1421875 + GCA012955505_01689 lysP Gamma-aminobutyrate permease COG:COG0833, COG:E, SO:0001217, UniRef:UniRef50_Q2FYU8, UniRef:UniRef90_A0A2A1KBZ4 contig_1 cds 1422016 1422330 + GCA012955505_01690 Phage protein RefSeq:WP_016931073.1, SO:0001217, UniParc:UPI00031E4859, UniRef:UniRef100_A0A640MX29, UniRef:UniRef50_B9DP93, UniRef:UniRef90_A0A380FZK7 contig_1 cds 1422418 1423221 - GCA012955505_01691 cof Cof-type HAD-IIB family hydrolase COG:COG0561, COG:HR, EC:3.1.3.104, KEGG:K21064, RefSeq:WP_016931072.1, SO:0001217, UniParc:UPI0002E18511, UniRef:UniRef100_A0A640MVE8, UniRef:UniRef50_Q2FYV1, UniRef:UniRef90_A0A7Z1SB96 contig_1 cds 1423274 1424191 - GCA012955505_01692 thrB homoserine kinase COG:COG0083, COG:E, EC:2.7.1.39, GO:0004413, GO:0005524, GO:0005737, GO:0009088, KEGG:K00872, RefSeq:WP_016931071.1, SO:0001217, UniParc:UPI0002F3BBD4, UniRef:UniRef100_A0A640MX18, UniRef:UniRef50_Q2FYV2, UniRef:UniRef90_Q4L639 contig_1 cds 1424194 1425255 - GCA012955505_01693 thrC threonine synthase COG:COG0498, COG:E, EC:4.2.3.1, GO:0004795, GO:0009088, KEGG:K01733, RefSeq:WP_011275868.1, SO:0001217, UniParc:UPI000054BB9C, UniRef:UniRef100_A0A640MVD9, UniRef:UniRef50_Q9K7E3, UniRef:UniRef90_A0A380G0K3 contig_1 cds 1425261 1426517 - GCA012955505_01694 thrA Homoserine dehydrogenase COG:COG0460, COG:E, SO:0001217, UniRef:UniRef50_B9DP89, UniRef:UniRef90_A0A2K0A8B9 contig_1 cds 1426736 1428112 + GCA012955505_01695 metL1 aspartate kinase COG:COG0527, COG:E, EC:2.7.2.4, GO:0004072, GO:0009089, SO:0001217, UniRef:UniRef50_A0A6V7RA03, UniRef:UniRef90_A0A7T8ZKC9 contig_1 cds 1428178 1428792 - GCA012955505_01696 Nucleotidyltransferase family protein SO:0001217, UniRef:UniRef50_A0A1S1GQT7, UniRef:UniRef90_A0A5B2Z2M9 contig_1 cds 1429045 1429902 + GCA012955505_01697 NERD domain-containing protein SO:0001217, UniRef:UniRef50_G5JGH5, UniRef:UniRef90_A0A2K0A8A9 contig_1 cds 1429964 1430506 - GCA012955505_01698 nucI thermonuclease NucI COG:COG1525, COG:L, EC:3.1.31.1, GO:0003676, GO:0016894, SO:0001217, UniRef:UniRef50_P43270, UniRef:UniRef90_A0A2K0A8B4 contig_1 cds 1430636 1430833 + GCA012955505_01699 hypothetical protein contig_1 cds 1431004 1431183 + GCA012955505_01700 Phage protein RefSeq:WP_011275875.1, SO:0001217, UniParc:UPI000054BBA3, UniRef:UniRef100_A0A640MUW9, UniRef:UniRef50_A0A853UZT9, UniRef:UniRef90_A0A640MUW9 contig_1 cds 1431337 1431939 - GCA012955505_01701 citB DNA-binding response regulator COG:COG2197, COG:TK, KEGG:K07693, RefSeq:WP_011275876.1, SO:0001217, UniParc:UPI000054BBA4, UniRef:UniRef100_A0A640MV94, UniRef:UniRef50_Q2FYW0, UniRef:UniRef90_A0A640MV94 contig_1 cds 1431936 1432862 - GCA012955505_01702 histidine kinase SO:0001217, UniRef:UniRef50_A0A4U9TN42 contig_1 cds 1432863 1433396 - GCA012955505_01703 yadH (pseudo) ABC transporter permease COG:COG0842, COG:V, SO:0001217, UniRef:UniRef50_Q49XA5, UniRef:UniRef90_A0A2K0A8B8 contig_1 cds 1433603 1434298 - GCA012955505_01704 ABC transporter ATP-binding protein SO:0001217, UniRef:UniRef50_A0A380H898 contig_1 cds 1434608 1435942 - GCA012955505_01705 cls cardiolipin synthase COG:COG1502, COG:I, EC:2.7.8.-, GO:0008808, GO:0016780, GO:0032049, KEGG:K06131, SO:0001217, UniRef:UniRef50_Q8CPD8, UniRef:UniRef90_A0A7Z1N218 contig_1 cds 1436139 1437164 + GCA012955505_01706 gLY1 Low-specificity L-threonine aldolase COG:COG2008, COG:E, EC:4.1.2.48, KEGG:K01620, RefSeq:WP_049426375.1, SO:0001217, UniParc:UPI00066C9FD6, UniRef:UniRef100_UPI00066C9FD6, UniRef:UniRef50_Q2FYW6, UniRef:UniRef90_A0A380G1H2 contig_1 cds 1437638 1437880 - GCA012955505_01707 DNA-binding protein RefSeq:WP_041615161.1, SO:0001217, UniParc:UPI00045256E2, UniRef:UniRef100_A0A640MZS5, UniRef:UniRef50_A0A1S1GQU6, UniRef:UniRef90_A0A640MZS5 contig_1 cds 1438098 1438271 - GCA012955505_01708 Capsid assembly scaffolding protein Gp46 RefSeq:WP_080366936.1, SO:0001217, UniParc:UPI0002F0E15C, UniRef:UniRef100_A0A640MV60, UniRef:UniRef50_A0A640MV60, UniRef:UniRef90_A0A640MV60 contig_1 cds 1438390 1438608 - GCA012955505_01709 Phage protein RefSeq:WP_011275886.1, SO:0001217, UniParc:UPI000054BBAE, UniRef:UniRef100_A0A640N0J1, UniRef:UniRef50_A0A641AA60, UniRef:UniRef90_A0A640N0J1 contig_1 cds 1438642 1438944 - GCA012955505_01710 hypothetical protein contig_1 cds 1438892 1439482 - GCA012955505_01711 Phage head morphogenesis domain-containing protein SO:0001217, UniRef:UniRef50_A0A640MUW3 contig_1 cds 1440005 1441345 - GCA012955505_01712 glnA type I glutamate--ammonia ligase COG:COG0174, COG:E, EC:6.3.1.2, GO:0004356, GO:0005524, GO:0005737, GO:0006542, GO:0046872, KEGG:K01915, RefSeq:WP_011275890.1, SO:0001217, UniParc:UPI000054BBB2, UniRef:UniRef100_A0A640MV55, UniRef:UniRef50_P12425, UniRef:UniRef90_Q5HGC3 contig_1 cds 1441366 1441731 - GCA012955505_01713 soxR MerR family transcriptional regulator COG:COG0789, COG:K, RefSeq:WP_011275891.1, SO:0001217, UniParc:UPI000054BBB3, UniRef:UniRef100_A0A640MVQ4, UniRef:UniRef50_Q2FYY7, UniRef:UniRef90_A0A657ZS39 contig_1 cds 1441932 1443170 - GCA012955505_01714 ynbB Aluminum resistance protein COG:COG4100, COG:PR, RefSeq:WP_011275892.1, SO:0001217, UniParc:UPI000054BBB4, UniRef:UniRef100_A0A640MZP6, UniRef:UniRef50_A0A970V5D7, UniRef:UniRef90_A0A2K0A8C3 contig_1 cds 1443190 1444428 - GCA012955505_01715 hflX GTPase HflX COG:COG2262, COG:J, GO:0005525, RefSeq:WP_011275893.1, SO:0001217, UniParc:UPI000054BBB5, UniRef:UniRef100_A0A640MV29, UniRef:UniRef50_B9DPA4, UniRef:UniRef90_A0A640MV29 contig_1 cds 1444538 1445014 + GCA012955505_01716 btuE Glutathione peroxidase COG:COG0386, COG:VI, EC:1.11.1.9, KEGG:K00432, RefSeq:WP_011275894.1, SO:0001217, UniParc:UPI000054BBB6, UniRef:UniRef100_A0A640N0G0, UniRef:UniRef50_E3E934, UniRef:UniRef90_A0A640N0G0 contig_1 cds 1445207 1445449 - GCA012955505_01717 hfq RNA chaperone Hfq COG:COG1923, COG:T, GO:0003723, GO:0016070, RefSeq:WP_011275895.1, SO:0001217, UniParc:UPI000054BBB7, UniRef:UniRef100_A0A640MVL3, UniRef:UniRef50_A0A640MVL3, UniRef:UniRef90_A0A640MVL3 contig_1 cds 1445403 1446401 - GCA012955505_01718 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA COG:COG0324, COG:J, EC:2.5.1.75, GO:0005524, GO:0005737, GO:0006400, GO:0052381, RefSeq:WP_136719900.1, SO:0001217, UniParc:UPI0010AB7176, UniRef:UniRef100_UPI0010AB7176, UniRef:UniRef50_Q5HPN8, UniRef:UniRef90_Q4L610 contig_1 cds 1446417 1447265 - GCA012955505_01719 Putative lysophospholipase SO:0001217, UniRef:UniRef50_A0A380G939 contig_1 cds 1447403 1449025 - GCA012955505_01720 glpD Aerobic glycerol-3-phosphate dehydrogenase COG:C, COG:COG0578, EC:1.1.5.3, GO:0004368, GO:0005737, GO:0019563, GO:0046168, KEGG:K00111, SO:0001217, UniRef:UniRef50_Q6GHD4, UniRef:UniRef90_Q4L608 contig_1 cds 1449178 1450170 - GCA012955505_01721 ATP:glycerol 3-phosphotransferase SO:0001217, UniRef:UniRef50_A0A380C5S1 contig_1 cds 1450110 1450667 - GCA012955505_01722 ATP:glycerol 3-phosphotransferase SO:0001217, UniRef:UniRef50_A0A5S9M983 contig_1 cds 1450794 1451597 - GCA012955505_01723 glpF Aquaporin family protein COG:COG0580, COG:G, SO:0001217, UniRef:UniRef50_P18156, UniRef:UniRef90_A0A640MUM5 contig_1 cds 1451824 1452357 - GCA012955505_01724 glpP Glycerol uptake operon antiterminator regulatory protein COG:COG1954, COG:K, RefSeq:WP_011275901.1, SO:0001217, UniParc:UPI000054BBBD, UniRef:UniRef100_A0A640MV57, UniRef:UniRef50_Q2FYZ7, UniRef:UniRef90_A0A2K0A8D0 contig_1 cds 1452373 1453278 - GCA012955505_01725 mutL (pseudo) DNA mismatch repair endonuclease MutL COG:COG0323, COG:L, GO:0005524, GO:0006298, GO:0016887, GO:0030983, GO:0032300, SO:0001217, UniRef:UniRef50_Q93T05, UniRef:UniRef90_A0A7Z1MX74 contig_1 cds 1453356 1454387 - GCA012955505_01726 mutL DNA mismatch repair endonuclease MutL GO:0005524, GO:0006298, GO:0016887, GO:0030983, SO:0001217, UniRef:UniRef50_B1VKB0, UniRef:UniRef90_UPI001C408533 contig_1 cds 1454400 1457051 - GCA012955505_01727 mutS DNA mismatch repair protein MutS COG:COG0249, COG:L, GO:0003684, GO:0005524, GO:0005829, GO:0006298, GO:0030983, GO:0140664, RefSeq:WP_011275903.1, SO:0001217, UniParc:UPI000054BBBF, UniRef:UniRef100_Q4L5Z9, UniRef:UniRef50_Q2FYZ9, UniRef:UniRef90_Q4L5Z9 contig_1 cds 1457318 1457809 - GCA012955505_01728 thiW energy coupling factor transporter S component ThiW COG:COG4732, COG:H, GO:0005215, GO:0006810, GO:0009228, RefSeq:WP_011275904.1, SO:0001217, UniParc:UPI000054BBC0, UniRef:UniRef100_A0A640MUP7, UniRef:UniRef50_Q2FZ00, UniRef:UniRef90_A0A2K0A8D9 contig_1 cds 1457831 1458196 - GCA012955505_01729 ymcA YlbF family regulator COG:COG4550, COG:T, RefSeq:WP_011275905.1, SO:0001217, UniParc:UPI000054BBC1, UniRef:UniRef100_A0A2A1KAJ1, UniRef:UniRef50_Q49X86, UniRef:UniRef90_A0A2A1KAJ1 contig_1 cds 1458197 1458505 - GCA012955505_01730 TRAM domain-containing protein SO:0001217, UniRef:UniRef50_UPI001022D247 contig_1 cds 1458679 1459716 - GCA012955505_01731 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase SO:0001217, UniRef:UniRef50_A0A4Q1TAN1 contig_1 cds 1460015 1460311 - GCA012955505_01732 yqgV Thiamine-binding protein domain-containing protein COG:COG0011, COG:H, RefSeq:WP_145463166.1, SO:0001217, UniParc:UPI0011A3A0A4, UniRef:UniRef100_UPI0011A3A0A4, UniRef:UniRef50_Q49X83, UniRef:UniRef90_Q5HPP9 contig_1 cds 1460372 1460986 - GCA012955505_01733 poly-gamma-glutamate hydrolase family protein SO:0001217, UniRef:UniRef50_A0AAP8PRJ4, UniRef:UniRef90_UPI0029049D2B contig_1 cds 1461056 1461850 - GCA012955505_01734 2-oxoacid:ferredoxin oxidoreductase subunit beta SO:0001217, UniRef:UniRef50_A0A6G9J3A1, UniRef:UniRef90_UPI000DA3863E contig_1 cds 1461851 1463611 - GCA012955505_01735 porG 2-oxoglutarate oxidoreductase subunit alpha COG:C, COG:COG1014, EC:1.2.7.11, EC:1.2.7.3, KEGG:K00174, RefSeq:WP_011275910.1, SO:0001217, UniParc:UPI000054BBC6, UniRef:UniRef100_A0A2A1KAD5, UniRef:UniRef50_A0A840PSQ9, UniRef:UniRef90_A0A380FZP7 contig_1 cds 1463746 1464540 - GCA012955505_01736 ymdB Metallophosphoesterase COG:COG1692, COG:T, EC:3.1.4.16, KEGG:K09769, RefSeq:WP_011275911.1, SO:0001217, UniParc:UPI000054BBC7, UniRef:UniRef100_A0A2A1KFN5, UniRef:UniRef50_O31775, UniRef:UniRef90_A0A2A1KFN5 contig_1 cds 1464699 1464914 + GCA012955505_01737 Phage protein RefSeq:WP_011275912.1, SO:0001217, UniParc:UPI000054BBC8, UniRef:UniRef100_A0A640N086, UniRef:UniRef50_Q2FZ07, UniRef:UniRef90_A0A380G2Y7 contig_1 cds 1465186 1466745 - GCA012955505_01738 rny ribonuclease Y COG:COG1418, COG:JR, EC:3.1.-.-, GO:0003723, GO:0004521, GO:0005886, GO:0006402, GO:0016020, RefSeq:WP_011275913.1, SO:0001217, UniParc:UPI000054BBC9, UniRef:UniRef100_Q4L5Y9, UniRef:UniRef50_O31774, UniRef:UniRef90_Q2FZ08 contig_1 cds 1467132 1468178 - GCA012955505_01739 recA recombinase RecA COG:COG0468, COG:L, GO:0003677, GO:0003684, GO:0003697, GO:0005524, GO:0005829, GO:0006281, GO:0006310, GO:0008094, GO:0009432, GO:0016887, GO:0140664, KEGG:K03553, RefSeq:WP_011275914.1, SO:0001217, UniParc:UPI000054BBCA, UniRef:UniRef100_Q4L5Y8, UniRef:UniRef50_P0A452, UniRef:UniRef90_Q5HPQ6 contig_1 cds 1468354 1469496 - GCA012955505_01740 cinA Putative competence-damage inducible protein COG:COG1058, COG:L, SO:0001217, UniRef:UniRef50_A0A380G809, UniRef:UniRef90_A0A640MZF2 contig_1 cds 1469651 1470226 - GCA012955505_01741 pgsA CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase COG:COG0558, COG:I, EC:2.7.8.5, GO:0008444, GO:0008654, GO:0016020, KEGG:K00995, RefSeq:WP_011275916.1, SO:0001217, UniParc:UPI000054BBCC, UniRef:UniRef100_A0A640MUT1, UniRef:UniRef50_Q8DMX8, UniRef:UniRef90_A0A5B2YSM1 contig_1 cds 1470260 1470652 - GCA012955505_01742 rodZ Helix-turn-helix domain-containing protein COG:COG1426, COG:D, KEGG:K15539, RefSeq:WP_016930680.1, SO:0001217, UniParc:UPI0002E8BB09, UniRef:UniRef100_UPI0002E8BB09, UniRef:UniRef50_Q2FZ12, UniRef:UniRef90_Q4L5Y5 contig_1 cds 1470674 1471504 - GCA012955505_01743 DUF3388 domain-containing protein RefSeq:WP_016930681.1, SO:0001217, UniParc:UPI000318476F, UniRef:UniRef100_A0A2A1KE25, UniRef:UniRef50_Q49X69, UniRef:UniRef90_A0A640MUF8 contig_1 cds 1471678 1472382 - GCA012955505_01744 ymfI elongation factor P 5-aminopentanone reductase COG:COG1028, COG:I, RefSeq:WP_011275919.1, SO:0001217, UniParc:UPI000054BBCF, UniRef:UniRef100_A0A640MUY1, UniRef:UniRef50_A0A380G8X7, UniRef:UniRef90_A0A2K0A8F4 contig_1 cds 1472382 1473671 - GCA012955505_01745 yfmH EF-P 5-aminopentanol modification-associated protein YfmH COG:COG0612, COG:R, RefSeq:WP_016930682.1, SO:0001217, UniParc:UPI0002EDEAEE, UniRef:UniRef100_A0A640MWH0, UniRef:UniRef50_A0A7U7PY37, UniRef:UniRef90_Q4L5Y2 contig_1 cds 1473671 1473904 - GCA012955505_01746 hypothetical protein contig_1 cds 1473920 1474945 - GCA012955505_01747 yfmF EF-P 5-aminopentanol modification-associated protein YfmF COG:COG0612, COG:R, SO:0001217, UniRef:UniRef50_Q2FZ16, UniRef:UniRef90_A0A2K0A8F2 contig_1 cds 1474971 1475690 - GCA012955505_01748 mngR GntR family transcriptional regulator COG:COG2188, COG:K, SO:0001217, UniRef:UniRef50_Q2FZ17, UniRef:UniRef90_A0A2K0AA00 contig_1 cds 1475691 1477523 - GCA012955505_01749 ftsK Cell division protein FtsK SO:0001217, UniRef:UniRef50_A0A9Q9F262 contig_1 cds 1477520 1478107 - GCA012955505_01750 hypothetical protein contig_1 cds 1478343 1478648 - GCA012955505_01751 Ribonuclease J SO:0001217, UniRef:UniRef50_A0A5Q2N1R8 contig_1 cds 1478717 1479979 - GCA012955505_01752 Zn-dependent hydrolase SO:0001217, UniRef:UniRef50_A0A380DYD9, UniRef:UniRef90_A0A380DYD9 contig_1 cds 1480154 1482256 - GCA012955505_01753 pnp polyribonucleotide nucleotidyltransferase COG:COG1185, COG:J, EC:2.7.7.8, GO:0000175, GO:0000287, GO:0003723, GO:0004654, GO:0005829, GO:0006396, GO:0006402, KEGG:K00962, RefSeq:WP_016930685.1, SO:0001217, UniParc:UPI0002FC4B1F, UniRef:UniRef100_A0A640MWF5, UniRef:UniRef50_Q2FZ20, UniRef:UniRef90_Q2FZ20 contig_1 cds 1482376 1482645 - GCA012955505_01754 rpsO 30S ribosomal protein S15 COG:COG0184, COG:J, GO:0003735, GO:0005840, GO:0006412, GO:0019843, GO:0022627, RefSeq:WP_011275926.1, SO:0001217, UniParc:UPI000054BBD6, UniRef:UniRef100_Q4L5X6, UniRef:UniRef50_Q2G2Q1, UniRef:UniRef90_Q2G2Q1 contig_1 cds 1482759 1483730 - GCA012955505_01755 ribF bifunctional riboflavin kinase/FAD synthetase COG:COG0196, COG:H, EC:2.7.1.26, EC:2.7.7.2, GO:0003919, KEGG:K11753, RefSeq:WP_011275927.1, SO:0001217, UniParc:UPI000054BBD7, UniRef:UniRef100_A0A640MUF4, UniRef:UniRef50_Q2G2Q2, UniRef:UniRef90_A0A380G041 contig_1 cds 1483810 1484658 - GCA012955505_01756 truB tRNA pseudouridine(55) synthase TruB COG:COG0130, COG:J, EC:5.4.99.25, GO:0001522, GO:0003723, GO:0009451, GO:0009982, GO:0031119, GO:0160148, GO:1990481, KEGG:K03177, SO:0001217, UniRef:UniRef50_Q2G2Q3, UniRef:UniRef90_Q4L5X4 contig_1 cds 1484887 1485237 - GCA012955505_01757 rbfA 30S ribosome-binding factor RbfA COG:COG0858, COG:J, GO:0005829, GO:0006364, GO:0030490, GO:0043024, KEGG:K02834, RefSeq:WP_011275930.1, SO:0001217, UniParc:UPI000054BBDA, UniRef:UniRef100_Q4L5X2, UniRef:UniRef50_B9DPD6, UniRef:UniRef90_Q4L5X2 contig_1 cds 1485399 1487447 - GCA012955505_01758 infB translation initiation factor IF-2 COG:COG0532, COG:J, GO:0003743, GO:0003924, GO:0005525, GO:0005737, GO:0005829, GO:0006413, KEGG:K02519, SO:0001217, UniRef:UniRef50_P17889, UniRef:UniRef90_Q4L5X1 contig_1 cds 1487452 1487736 - GCA012955505_01759 Ribosomal protein eL8/eL30/eS12/Gadd45 domain-containing protein SO:0001217, UniRef:UniRef50_I3E4N9 contig_1 cds 1487759 1489429 - GCA012955505_01760 nusA Transcription termination/antitermination protein NusA SO:0001217, UniRef:UniRef50_A0A069D7V1 contig_1 cds 1489598 1493914 - GCA012955505_01761 polC PolC-type DNA polymerase III COG:COG2176, COG:L, EC:2.7.7.7, GO:0003677, GO:0003887, GO:0005737, GO:0006260, GO:0006261, GO:0008408, KEGG:K03763, SO:0001217, UniRef:UniRef50_Q2G1Z8, UniRef:UniRef90_Q2G1Z8 contig_1 cds 1494175 1495875 - GCA012955505_01762 proS proline--tRNA ligase COG:COG0442, COG:J, EC:6.1.1.15, GO:0000166, GO:0002161, GO:0004812, GO:0004827, GO:0005524, GO:0005829, GO:0006418, GO:0006433, GO:0016740, KEGG:K01881, RefSeq:WP_011275937.1, SO:0001217, UniParc:UPI000054BBE1, UniRef:UniRef100_Q4L5W5, UniRef:UniRef50_Q2G1Z4, UniRef:UniRef90_Q4L5W5 contig_1 cds 1495894 1497180 - GCA012955505_01763 rseP RIP metalloprotease RseP COG:COG0750, COG:OK, GO:0004222, GO:0006508, GO:0016020, RefSeq:WP_011275938.1, SO:0001217, UniParc:UPI000054BBE2, UniRef:UniRef100_A0A640MZX6, UniRef:UniRef50_P63333, UniRef:UniRef90_A0A2K0A8G6 contig_1 cds 1497391 1498173 - GCA012955505_01764 cdsA Phosphatidate cytidylyltransferase COG:COG0575, COG:I, EC:2.7.7.41, GO:0004605, GO:0005886, GO:0016024, KEGG:K00981, RefSeq:WP_011275939.1, SO:0001217, UniParc:UPI000054BBE3, UniRef:UniRef100_Q4L5W3, UniRef:UniRef50_Q5HPT0, UniRef:UniRef90_Q4L5W3 contig_1 cds 1498177 1498947 - GCA012955505_01765 uppS isoprenyl transferase COG:COG0020, COG:I, EC:2.5.1.-, GO:0000287, GO:0005829, GO:0008834, GO:0016094, GO:0016765, GO:0030145, GO:0045547, RefSeq:WP_011275940.1, SO:0001217, UniParc:UPI000054BBE4, UniRef:UniRef100_Q4L5W2, UniRef:UniRef50_Q8DRB3, UniRef:UniRef90_Q4L5W2 contig_1 cds 1499271 1499723 - GCA012955505_01766 Ribosome recycling factor SO:0001217, UniRef:UniRef50_A0A7C1WR24 contig_1 cds 1499741 1500517 - GCA012955505_01767 pyrH UMP kinase COG:COG0528, COG:F, EC:2.7.4.22, GO:0005524, GO:0005737, GO:0006221, GO:0006225, GO:0015949, GO:0033862, GO:0044210, SO:0001217, UniParc:UPI00044DFD69, UniRef:UniRef100_Q4L5W0, UniRef:UniRef50_O31749, UniRef:UniRef90_Q2FZ22 contig_1 cds 1500600 1501478 - GCA012955505_01768 tsf translation elongation factor Ts COG:COG0264, COG:J, GO:0003746, GO:0005737, GO:0006414, RefSeq:WP_011275943.1, SO:0001217, UniParc:UPI000054BBE7, UniRef:UniRef100_Q4L5V9, UniRef:UniRef50_Q2FZ23, UniRef:UniRef90_Q2FZ23 contig_1 cds 1501636 1502424 - GCA012955505_01769 rpsB 30S ribosomal protein S2 COG:COG0052, COG:J, GO:0003735, GO:0006412, GO:0015935, GO:0022627, KEGG:K02967, RefSeq:WP_011275944.1, SO:0001217, UniParc:UPI000054BBE8, UniRef:UniRef100_Q4L5V8, UniRef:UniRef50_P21464, UniRef:UniRef90_Q2FZ25 contig_1 cds 1502691 1503464 - GCA012955505_01770 codY GTP-sensing pleiotropic transcriptional regulator CodY COG:COG4465, COG:K, GO:0003677, GO:0003700, GO:0005525, GO:0005737, GO:0045892, KEGG:K03706, RefSeq:WP_011275945.1, SO:0001217, UniParc:UPI000054BBE9, UniRef:UniRef100_Q4L5V7, UniRef:UniRef50_P39779, UniRef:UniRef90_Q2FZ27 contig_1 cds 1503486 1504889 - GCA012955505_01771 hslU ATP-dependent protease ATPase subunit HslU COG:COG1220, COG:O, EC:3.4.25.2, GO:0005524, GO:0008233, GO:0009376, GO:0016887, GO:0036402, GO:0043335, GO:0051603, RefSeq:WP_011275946.1, SO:0001217, UniParc:UPI000054BBEA, UniRef:UniRef100_Q4L5V6, UniRef:UniRef50_P63796, UniRef:UniRef90_P63796 contig_1 cds 1504948 1505493 - GCA012955505_01772 hslV ATP-dependent protease subunit HslV COG:COG5405, COG:O, EC:3.4.25.2, GO:0004298, GO:0005839, GO:0009376, GO:0046872, GO:0051603, KEGG:K01419, RefSeq:WP_011275947.1, SO:0001217, UniParc:UPI000054BBEB, UniRef:UniRef100_Q4L5V5, UniRef:UniRef50_Q2FZ29, UniRef:UniRef90_Q2FZ29 contig_1 cds 1505494 1506045 - GCA012955505_01773 tyrosine-type recombinase/integrase SO:0001217, UniRef:UniRef50_UPI000FEE8122 contig_1 cds 1506087 1506374 - GCA012955505_01774 Integrase recombinase SO:0001217, UniRef:UniRef50_A0A380FF04 contig_1 cds 1506519 1507826 - GCA012955505_01775 trmFO methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO COG:COG1206, COG:J, EC:2.1.1.74, GO:0002098, GO:0005829, GO:0008033, GO:0030488, GO:0047151, GO:0050660, KEGG:K04094, RefSeq:WP_011275949.1, SO:0001217, UniParc:UPI000054BBED, UniRef:UniRef100_Q4L5V3, UniRef:UniRef50_Q2FZ31, UniRef:UniRef90_Q2FZ31 contig_1 cds 1507850 1509919 - GCA012955505_01776 topA type I DNA topoisomerase COG:COG0551, COG:L, EC:5.6.2.1, GO:0003677, GO:0003917, GO:0005694, GO:0005737, GO:0006260, GO:0006265, GO:0046872, KEGG:K03168, RefSeq:WP_011275950.1, SO:0001217, UniParc:UPI000054BBEE, UniRef:UniRef100_Q4L5V2, UniRef:UniRef50_Q9CG80, UniRef:UniRef90_Q2FZ32 contig_1 cds 1509975 1510841 - GCA012955505_01777 dprA DNA-processing protein DprA COG:COG0758, COG:L, GO:0009294, RefSeq:WP_011275951.1, SO:0001217, UniParc:UPI000054BBEF, UniRef:UniRef100_A0A640MW56, UniRef:UniRef50_A0A6N3DYC7, UniRef:UniRef90_A0A5B2YWI5 contig_1 cds 1511060 1512289 - GCA012955505_01778 fmhB Aminoacyltransferase FemA COG:COG2348, COG:M, EC:2.3.2.-, KEGG:K12554, RefSeq:WP_011275952.1, SO:0001217, UniParc:UPI000054BBF0, UniRef:UniRef100_A0A640MUE1, UniRef:UniRef50_B9DMC1, UniRef:UniRef90_A0A640MUE1 contig_1 cds 1512582 1513487 - GCA012955505_01779 sucD succinate--CoA ligase subunit alpha COG:C, COG:COG0074, EC:6.2.1.5, GO:0003824, RefSeq:WP_011275953.1, SO:0001217, UniParc:UPI000054BBF1, UniRef:UniRef100_A0A640MU54, UniRef:UniRef50_P80865, UniRef:UniRef90_A0A380FEU0 contig_1 cds 1513509 1514675 - GCA012955505_01780 sucC ADP-forming succinate--CoA ligase subunit beta COG:C, COG:COG0045, EC:6.2.1.5, GO:0000287, GO:0003824, GO:0004775, GO:0004776, GO:0005524, GO:0005829, GO:0006099, GO:0006104, GO:0042709, GO:0046872, RefSeq:WP_011275954.1, SO:0001217, UniParc:UPI000054BBF2, UniRef:UniRef100_Q4L5U8, UniRef:UniRef50_Q8UC60, UniRef:UniRef90_Q49X32 contig_1 cds 1514787 1515554 - GCA012955505_01781 rnhB ribonuclease HII COG:COG0164, COG:L, EC:3.1.26.4, GO:0003723, GO:0004523, GO:0005737, GO:0006298, GO:0030145, GO:0032299, GO:0043137, KEGG:K03470, RefSeq:WP_011275955.1, SO:0001217, UniParc:UPI000054BBF3, UniRef:UniRef100_Q4L5U7, UniRef:UniRef50_Q5HPU6, UniRef:UniRef90_Q4L5U7 contig_1 cds 1515538 1516335 - GCA012955505_01782 ylqF ribosome biogenesis GTPase YlqF COG:COG1161, COG:J, GO:0003924, GO:0005525, GO:0005737, GO:0042254, SO:0001217, UniRef:UniRef50_A0A3G6UNR5, UniRef:UniRef90_A0A640MZQ9 contig_1 cds 1516522 1517028 + GCA012955505_01783 Membrane protein SO:0001217, UniRef:UniRef50_A0A380G9A6 contig_1 cds 1517148 1518941 + GCA012955505_01784 yfhO YfhO family protein KEGG:K25619, SO:0001217, UniRef:UniRef50_UPI001D155FE4, UniRef:UniRef90_UPI001D155FE4 contig_1 cds 1518967 1520955 + GCA012955505_01785 Integral membrane protein SO:0001217, UniRef:UniRef50_A0A380EGW7 contig_1 cds 1520943 1521533 + GCA012955505_01786 Integral membrane protein SO:0001217, UniRef:UniRef50_A0A380EJD3 contig_1 cds 1521690 1522040 - GCA012955505_01787 rplS 50S ribosomal protein L19 COG:COG0335, COG:J, GO:0000311, GO:0003735, GO:0006412, GO:0022625, KEGG:K02884, RefSeq:WP_011275959.1, SO:0001217, UniParc:UPI000054BBF7, UniRef:UniRef100_Q4L5U3, UniRef:UniRef50_Q8EWU9, UniRef:UniRef90_B9DPI8 contig_1 ncRNA-region 1522059 1522101 - Ribosomal protein L19 leader RFAM:RF00556, SO:0000140 contig_1 cds 1522145 1522882 - GCA012955505_01788 trmD tRNA (guanosine(37)-N1)-methyltransferase TrmD COG:COG0336, COG:J, EC:2.1.1.228, GO:0002939, GO:0005829, GO:0008033, GO:0052906, RefSeq:WP_011275960.1, SO:0001217, UniParc:UPI000054BBF8, UniRef:UniRef100_Q4L5U2, UniRef:UniRef50_Q6GHJ5, UniRef:UniRef90_Q4L5U2 contig_1 cds 1522882 1523385 - GCA012955505_01789 rimM ribosome maturation factor RimM COG:COG0806, COG:J, GO:0005737, GO:0005840, GO:0006364, GO:0042274, GO:0043022, RefSeq:WP_053020112.1, SO:0001217, UniParc:UPI00069DE48E, UniRef:UniRef100_UPI00069DE48E, UniRef:UniRef50_Q2FZ44, UniRef:UniRef90_Q4L5U1 contig_1 cds 1523504 1523779 - GCA012955505_01790 rpsP 30S ribosomal protein S16 COG:COG0228, COG:J, GO:0000314, GO:0003735, GO:0005737, GO:0006412, GO:0015935, GO:0022627, RefSeq:WP_011275962.1, SO:0001217, UniParc:UPI000054BBFA, UniRef:UniRef100_Q4L5U0, UniRef:UniRef50_Q2FZ45, UniRef:UniRef90_Q5HPV3 contig_1 cds 1524049 1525371 - GCA012955505_01791 ffh signal recognition particle protein COG:COG0541, COG:U, GO:0003924, GO:0005048, GO:0005525, GO:0009306, GO:0048501, SO:0001217, UniRef:UniRef50_P37105, UniRef:UniRef90_A0A7Z7QZ67 contig_1 cds 1525552 1526724 - GCA012955505_01792 ftsY signal recognition particle-docking protein FtsY GO:0003924, GO:0005047, GO:0006614, GO:0009306, KEGG:K03110, SO:0001217, UniRef:UniRef50_Q2FZ48, UniRef:UniRef90_UPI001F5A11C3 contig_1 cds 1526721 1527833 - GCA012955505_01793 chromosome segregation SMC family protein SO:0001217, UniRef:UniRef50_UPI0035A238FE contig_1 cds 1528035 1530254 - GCA012955505_01794 chromosome segregation protein SMC SO:0001217, UniRef:UniRef50_UPI000D1D049B contig_1 cds 1530339 1531196 - GCA012955505_01795 rnc ribonuclease III COG:COG0571, COG:K, EC:3.1.26.3, GO:0003723, GO:0003725, GO:0004525, GO:0005737, GO:0006364, GO:0006396, GO:0006397, GO:0008033, GO:0010468, GO:0019843, GO:0046872, SO:0001217, UniRef:UniRef50_Q2FZ50, UniRef:UniRef90_Q4L5T5 contig_1 cds 1531162 1531395 - GCA012955505_01796 acpP acyl carrier protein COG:COG0236, COG:I, GO:0000035, GO:0000036, GO:0005829, GO:0006633, GO:0009245, GO:0016020, RefSeq:WP_001830184.1, SO:0001217, UniParc:UPI00000E5237, UniRef:UniRef100_Q5HPV9, UniRef:UniRef50_Q8R9W1, UniRef:UniRef90_B9DPJ1 contig_1 cds 1531508 1532245 - GCA012955505_01797 fabG 3-oxoacyl-[acyl-carrier-protein] reductase COG:COG1028, COG:I, EC:1.1.1.100, GO:0004316, GO:0006633, GO:0051287, RefSeq:WP_011275968.1, SO:0001217, UniParc:UPI000054BC00, UniRef:UniRef100_A0A640MYU4, UniRef:UniRef50_A0A3B9SMK7, UniRef:UniRef90_A0A5B2YZP8 contig_1 cds 1532235 1533164 - GCA012955505_01798 fabD ACP S-malonyltransferase COG:COG0331, COG:I, EC:2.3.1.39, GO:0004314, GO:0006633, RefSeq:WP_011275969.1, SO:0001217, UniParc:UPI000054BC01, UniRef:UniRef100_A0A640MU71, UniRef:UniRef50_Q99UN8, UniRef:UniRef90_A0A2K0A8K2 contig_1 cds 1533157 1534143 - GCA012955505_01799 plsX phosphate acyltransferase PlsX COG:COG0416, COG:I, EC:2.3.1.274, GO:0005737, GO:0006633, GO:0008610, GO:0008654, GO:0043811, KEGG:K03621, RefSeq:WP_011275970.1, SO:0001217, UniParc:UPI000054BC02, UniRef:UniRef100_Q4L5T1, UniRef:UniRef50_P71018, UniRef:UniRef90_Q4L5T1 contig_1 cds 1534145 1534705 - GCA012955505_01800 fapR transcription factor FapR COG:COG2050, COG:Q, GO:0003677, GO:0003700, GO:0006633, GO:0045717, GO:0045892, RefSeq:WP_011275971.1, SO:0001217, UniParc:UPI000054BC03, UniRef:UniRef100_Q4L5T0, UniRef:UniRef50_Q4L5T0, UniRef:UniRef90_Q4L5T0 contig_1 cds 1534841 1536892 - GCA012955505_01801 recG ATP-dependent DNA helicase RecG COG:COG1200, COG:L, EC:3.6.4.12, EC:5.6.2.4, GO:0003676, GO:0003678, GO:0005524, GO:0006281, GO:0006310, KEGG:K03655, RefSeq:WP_016930693.1, SO:0001217, UniParc:UPI0002E75211, UniRef:UniRef100_A0A640MUS3, UniRef:UniRef50_O50581, UniRef:UniRef90_Q4L5S9 contig_1 cds 1537047 1537847 - GCA012955505_01802 yncB Thermonuclease COG:COG1525, COG:L, RefSeq:WP_011275973.1, SO:0001217, UniParc:UPI000054BC05, UniRef:UniRef100_A0A640MYS5, UniRef:UniRef50_A0A4U9TFJ9, UniRef:UniRef90_A0A5B2Z1C7 contig_1 cds 1537938 1539596 - GCA012955505_01803 fakA fatty acid kinase catalytic subunit FakA COG:COG1461, COG:I, GO:0004371, GO:0006071, RefSeq:WP_011275974.1, SO:0001217, UniParc:UPI000054BC06, UniRef:UniRef100_Q4L5S7, UniRef:UniRef50_O34751, UniRef:UniRef90_Q4L5S7 contig_1 cds 1539617 1539985 - GCA012955505_01804 yloU Asp23/Gls24 family envelope stress response protein COG:COG1302, COG:S, RefSeq:WP_011275975.1, SO:0001217, UniParc:UPI000054BC07, UniRef:UniRef100_A0A2A1KCM6, UniRef:UniRef50_F4BPZ1, UniRef:UniRef90_A0A2A1KCM6 contig_1 cds 1540268 1540456 + GCA012955505_01805 rpmB 50S ribosomal protein L28 COG:COG0227, COG:J, GO:0003735, GO:0005840, GO:0006412, GO:1990904, RefSeq:WP_145463163.1, SO:0001217, UniParc:UPI0011AB00D1, UniRef:UniRef100_UPI0011AB00D1, UniRef:UniRef50_Q82ZE4, UniRef:UniRef90_Q49X05 contig_1 cds 1540516 1541157 - GCA012955505_01806 thiN thiamine diphosphokinase COG:COG1564, COG:H, EC:2.7.6.2, GO:0004788, GO:0006772, KEGG:K00949, RefSeq:WP_011275977.1, SO:0001217, UniParc:UPI000054BC09, UniRef:UniRef100_A0A640MU95, UniRef:UniRef50_A0A380G740, UniRef:UniRef90_A0A5B2Z1C2 contig_1 cds 1541165 1541809 - GCA012955505_01807 rpe ribulose-phosphate 3-epimerase COG:COG0036, COG:G, EC:5.1.3.1, GO:0004750, GO:0006098, KEGG:K01783, RefSeq:WP_011275978.1, SO:0001217, UniParc:UPI000054BC0A, UniRef:UniRef100_A0A640MZG4, UniRef:UniRef50_A0A9X2JLJ7, UniRef:UniRef90_A0A640MZG4 contig_1 cds 1541809 1542684 - GCA012955505_01808 rsgA ribosome small subunit-dependent GTPase A COG:COG1162, COG:J, EC:3.6.1.-, GO:0003924, GO:0005525, GO:0005737, GO:0006412, GO:0019843, GO:0042274, GO:0043022, GO:0046872, KEGG:K06949, RefSeq:WP_011275979.1, SO:0001217, UniParc:UPI000054BC0B, UniRef:UniRef100_Q4L5S2, UniRef:UniRef50_Q8CSV8, UniRef:UniRef90_Q4L5S2 contig_1 cds 1543280 1544905 - GCA012955505_01809 pknB Stk1 family PASTA domain-containing Ser/Thr kinase COG:COG2815, COG:M, GO:0004672, GO:0005524, GO:0006468, SO:0001217, UniRef:UniRef50_A6QGC0, UniRef:UniRef90_A0A5B2Z010 contig_1 cds 1544902 1545645 - GCA012955505_01810 pTC1 Stp1/IreP family PP2C-type Ser/Thr phosphatase COG:COG0631, COG:T, EC:3.1.3.16, GO:0004722, GO:0006470, KEGG:K20074, RefSeq:WP_011275981.1, SO:0001217, UniParc:UPI000054BC0D, UniRef:UniRef100_A0A640MYN9, UniRef:UniRef50_A0A0D0SSN4, UniRef:UniRef90_A0A2A1KFI5 contig_1 cds 1545651 1546745 - GCA012955505_01811 rlmN 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN COG:COG0820, COG:J, EC:2.1.1.192, GO:0000049, GO:0002935, GO:0005737, GO:0008757, GO:0016433, GO:0019843, GO:0030488, GO:0046677, GO:0046872, GO:0051539, GO:0070040, GO:0070475, KEGG:K06941, RefSeq:WP_011275982.1, SO:0001217, UniParc:UPI000054BC0E, UniRef:UniRef100_Q4L5R9, UniRef:UniRef50_O34617, UniRef:UniRef90_Q2FZ66 contig_1 cds 1546747 1548054 - GCA012955505_01812 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB COG:COG0781, COG:K, EC:2.1.1.176, GO:0001510, GO:0003723, GO:0006355, GO:0008168, KEGG:K03500, RefSeq:WP_011275983.1, SO:0001217, UniParc:UPI000054BC0F, UniRef:UniRef100_A0A640MZE0, UniRef:UniRef50_A0A2T4MK73, UniRef:UniRef90_A0A5B2Z1B8 contig_1 cds 1548051 1548983 - GCA012955505_01813 fmt methionyl-tRNA formyltransferase COG:COG0223, COG:J, EC:2.1.2.9, GO:0004479, GO:0005737, GO:0071951, RefSeq:WP_169301925.1, SO:0001217, UniParc:UPI00145FC01F, UniRef:UniRef100_UPI00145FC01F, UniRef:UniRef50_P94463, UniRef:UniRef90_A0A640MUL1 contig_1 cds 1548976 1549464 - GCA012955505_01814 def peptide deformylase COG:COG0242, COG:J, EC:3.5.1.88, KEGG:K01462, RefSeq:WP_136719907.1, SO:0001217, UniParc:UPI0010AC81D5, UniRef:UniRef100_UPI0010AC81D5, UniRef:UniRef50_Q5HPX6, UniRef:UniRef90_A0A2K0A8L5 contig_1 cds 1549642 1549845 + GCA012955505_01815 tM2 TM2 domain-containing protein COG:COG2314, COG:R, RefSeq:WP_011275986.1, SO:0001217, UniParc:UPI000054BC12, UniRef:UniRef100_A0A640MTN7, UniRef:UniRef50_A0A355TQU5, UniRef:UniRef90_A0A640MTN7 contig_1 cds 1549908 1552316 - GCA012955505_01816 priA primosomal protein N' COG:COG1198, COG:L, EC:3.6.1.-, EC:5.6.2.4, GO:0003678, GO:0006260, GO:0032508, KEGG:K04066, RefSeq:WP_016930695.1, SO:0001217, UniParc:UPI0002D33990, UniRef:UniRef100_A0A2A1KBM0, UniRef:UniRef50_A0A0B8RHA5, UniRef:UniRef90_A0A640MTZ7 contig_1 cds 1552316 1553515 - GCA012955505_01817 coaBC bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC COG:COG0452, COG:H, EC:4.1.1.36, EC:6.3.2.5, GO:0004632, GO:0004633, GO:0010181, GO:0015937, GO:0015941, RefSeq:WP_011275988.1, SO:0001217, UniParc:UPI000054BC14, UniRef:UniRef100_A0A640MZB7, UniRef:UniRef50_W4QPQ9, UniRef:UniRef90_A0A640MZB7 contig_1 cds 1553678 1553890 - GCA012955505_01818 rpoZ DNA-directed RNA polymerase subunit omega COG:COG1758, COG:K, EC:2.7.7.6, GO:0000428, GO:0001054, GO:0001055, GO:0001056, GO:0001057, GO:0001058, GO:0001066, GO:0003677, GO:0003899, GO:0006351, RefSeq:WP_011275989.1, SO:0001217, UniParc:UPI000054BC15, UniRef:UniRef100_Q4L5R2, UniRef:UniRef50_Q2G1T9, UniRef:UniRef90_Q4L5R2 contig_1 cds 1553890 1554513 - GCA012955505_01819 gmk guanylate kinase COG:COG0194, COG:F, EC:2.7.4.8, GO:0004385, GO:0005524, GO:0005829, GO:0006163, RefSeq:WP_016930696.1, SO:0001217, UniParc:UPI00031DDAA8, UniRef:UniRef100_A0A640MZA6, UniRef:UniRef50_O34328, UniRef:UniRef90_P0C0M9 contig_1 cds 1554672 1556369 + GCA012955505_01820 rqcH Rqc2-like protein RqcH COG:COG1293, COG:JO, RefSeq:WP_016930697.1, SO:0001217, UniParc:UPI0003190A9E, UniRef:UniRef100_A0A640MUH9, UniRef:UniRef50_Q5HPY2, UniRef:UniRef90_A0A7Z1N827 contig_1 cds 1556447 1556821 - GCA012955505_01821 PhnB-like domain-containing protein COG:COG3865, COG:R, SO:0001217, UniRef:UniRef50_Q2G1U2, UniRef:UniRef90_A0AAE5MYS1 contig_1 cds 1557134 1557364 - GCA012955505_01822 Phage protein RefSeq:WP_011275993.1, SO:0001217, UniParc:UPI000054BC19, UniRef:UniRef100_A0A640MYI8, UniRef:UniRef50_A0A4Z1BHE7, UniRef:UniRef90_A0A2K0A8M0 contig_1 cds 1557392 1558000 - GCA012955505_01823 pyrE Orotate phosphoribosyltransferase COG:COG0461, COG:F, EC:2.4.2.10, GO:0000287, GO:0004588, GO:0019856, GO:0044205, RefSeq:WP_011275994.1, SO:0001217, UniParc:UPI000054BC1A, UniRef:UniRef100_Q4L5Q7, UniRef:UniRef50_P58856, UniRef:UniRef90_Q4L5Q7 contig_1 cds 1558002 1558694 - GCA012955505_01824 pyrF orotidine-5'-phosphate decarboxylase COG:COG0284, COG:F, EC:4.1.1.23, GO:0004590, GO:0005829, GO:0006207, GO:0044205, RefSeq:WP_011275995.1, SO:0001217, UniParc:UPI000054BC1B, UniRef:UniRef100_Q4L5Q6, UniRef:UniRef50_P25971, UniRef:UniRef90_Q4L5Q6 contig_1 cds 1558791 1561964 - GCA012955505_01825 carB carbamoyl-phosphate synthase large subunit COG:COG0458, COG:EF, EC:6.3.4.16, EC:6.3.5.5, GO:0004087, GO:0004088, GO:0005524, GO:0005737, GO:0006526, GO:0006541, GO:0008152, GO:0044205, GO:0046872, KEGG:K01955, RefSeq:WP_011275996.1, SO:0001217, UniParc:UPI000054BC1C, UniRef:UniRef100_Q4L5Q5, UniRef:UniRef50_P25994, UniRef:UniRef90_P63739 contig_1 cds 1561957 1563057 - GCA012955505_01826 carA carbamoyl phosphate synthase small subunit COG:COG0505, COG:EF, EC:6.3.5.5, GO:0004088, GO:0004359, GO:0005524, GO:0006207, GO:0006526, GO:0006541, GO:0044205, RefSeq:WP_011275997.1, SO:0001217, UniParc:UPI000054BC1D, UniRef:UniRef100_Q4L5Q4, UniRef:UniRef50_P25993, UniRef:UniRef90_Q4L5Q4 contig_1 cds 1563058 1564332 - GCA012955505_01827 allB dihydroorotase COG:COG0044, COG:F, EC:3.5.2.3, GO:0004151, GO:0006221, GO:0046872, RefSeq:WP_011275998.1, SO:0001217, UniParc:UPI000054BC1E, UniRef:UniRef100_A0A640MU02, UniRef:UniRef50_Q81WF0, UniRef:UniRef90_A0A640MU02 contig_1 cds 1564336 1565229 - GCA012955505_01828 pyrB aspartate carbamoyltransferase catalytic subunit COG:COG0540, COG:F, EC:2.1.3.2, GO:0004070, GO:0005829, GO:0006207, GO:0006520, GO:0016597, GO:0044205, RefSeq:WP_016930698.1, SO:0001217, UniParc:UPI00031F87AA, UniRef:UniRef100_A0A2A1KDC2, UniRef:UniRef50_P05654, UniRef:UniRef90_Q4L5Q2 contig_1 cds 1565262 1566557 - GCA012955505_01829 uraA Uracil permease COG:COG2233, COG:F, KEGG:K02824, SO:0001217, UniRef:UniRef50_P39766, UniRef:UniRef90_Q5HPZ2 contig_1 cds 1566805 1567332 - GCA012955505_01830 pyrR bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR COG:COG2065, COG:F, EC:2.4.2.9, GO:0003723, GO:0004845, GO:0006353, KEGG:K02825, RefSeq:WP_011276001.1, SO:0001217, UniParc:UPI000054BC21, UniRef:UniRef100_Q4L5Q0, UniRef:UniRef50_Q4L5Q0, UniRef:UniRef90_Q4L5Q0 contig_1 cds 1567778 1568695 - GCA012955505_01831 rluA Pseudouridine synthase COG:COG0564, COG:J, EC:5.4.99.23, KEGG:K06180, RefSeq:WP_011276002.1, SO:0001217, UniParc:UPI000054BC22, UniRef:UniRef100_A0A640MZ55, UniRef:UniRef50_A0A2M9MVX9, UniRef:UniRef90_A0A2J8BE99 contig_1 cds 1568707 1569183 - GCA012955505_01832 lspA signal peptidase II COG:COG0597, COG:MU, EC:3.4.23.36, GO:0004190, GO:0005886, GO:0006508, GO:0009306, KEGG:K03101, RefSeq:WP_011276003.1, SO:0001217, UniParc:UPI000054BC23, UniRef:UniRef100_Q4L5P8, UniRef:UniRef50_Q8CPK0, UniRef:UniRef90_Q4L5P8 contig_1 cds 1569299 1569778 - GCA012955505_01833 CHAP domain-containing protein COG:COG3942, COG:M, RefSeq:WP_011276004.1, SO:0001217, UniParc:UPI000054BC24, UniRef:UniRef100_A0A640MTY1, UniRef:UniRef50_A0A1E5TLA5, UniRef:UniRef90_A0A2K0A8N8 contig_1 cds 1569895 1570548 - GCA012955505_01834 catE Glyoxalase COG:COG2514, COG:Q, SO:0001217, UniRef:UniRef50_A0AAP7IFI2, UniRef:UniRef90_A0A2K0A8N1 contig_1 cds 1570985 1571452 - GCA012955505_01835 hypothetical protein contig_1 cds 1571418 1572242 - GCA012955505_01836 ybjT (pseudo) NAD(P)H-binding protein COG:COG0702, COG:R, SO:0001217, UniRef:UniRef50_A0A0H2VIH0, UniRef:UniRef90_A0A5B2Z142 contig_1 cds 1572746 1575496 - GCA012955505_01837 ileS isoleucine--tRNA ligase COG:COG0060, COG:J, EC:6.1.1.5, GO:0000049, GO:0000166, GO:0002161, GO:0004822, GO:0005524, GO:0005829, GO:0006428, GO:0008270, RefSeq:WP_016930699.1, SO:0001217, UniParc:UPI0002F50F07, UniRef:UniRef100_UPI0002F50F07, UniRef:UniRef50_P41972, UniRef:UniRef90_Q4L5P4 contig_1 cds 1575721 1576413 - GCA012955505_01838 divIVA Cell division protein DivIVA COG:COG3599, COG:D, RefSeq:WP_016930700.1, SO:0001217, UniParc:UPI0002D30BED, UniRef:UniRef100_A0A2A1KA85, UniRef:UniRef50_Q2FZ83, UniRef:UniRef90_A0A640MTE7 contig_1 cds 1576456 1577283 - GCA012955505_01839 ylmH RNA-binding protein COG:COG2302, COG:J, RefSeq:WP_145463161.1, SO:0001217, UniParc:UPI00119E18CA, UniRef:UniRef100_UPI00119E18CA, UniRef:UniRef50_Q2FZ84, UniRef:UniRef90_A0A2K0A8P0 contig_1 cds 1577317 1577607 - GCA012955505_01840 ycf19 Cell division protein COG:COG0762, COG:O, KEGG:K02221, RefSeq:WP_011276010.1, SO:0001217, UniParc:UPI000054BC2A, UniRef:UniRef100_A0A640MZ22, UniRef:UniRef50_Q2FZ85, UniRef:UniRef90_A0A640MZ22 contig_1 cds 1577620 1578213 - GCA012955505_01841 sepF Cell division protein SepF COG:COG1799, COG:D, GO:0000917, GO:0005737, GO:0043093, KEGG:K09772, RefSeq:WP_011276011.1, SO:0001217, UniParc:UPI000054BC2B, UniRef:UniRef100_Q4L5P0, UniRef:UniRef50_Q2FZ86, UniRef:UniRef90_Q4L5P0 contig_1 cds 1578225 1578893 - GCA012955505_01842 yggS Pyridoxal phosphate homeostasis protein COG:COG0325, COG:H, RefSeq:WP_011276012.1, SO:0001217, UniParc:UPI000054BC2C, UniRef:UniRef100_A0A640MTP3, UniRef:UniRef50_U2FRM0, UniRef:UniRef90_A0A2K0A8R4 contig_1 cds 1578992 1579783 - GCA012955505_01843 pgeF peptidoglycan editing factor PgeF COG:COG1496, COG:P, EC:2.4.2.1, GO:0004000, GO:0005507, GO:0016491, GO:0017061, GO:0046936, KEGG:K05810, RefSeq:WP_011276013.1, SO:0001217, UniParc:UPI000054BC2D, UniRef:UniRef100_Q4L5N8, UniRef:UniRef50_Q49WW9, UniRef:UniRef90_Q4L5N8 contig_1 cds 1580016 1581197 - GCA012955505_01844 ftsZ cell division protein FtsZ COG:COG0206, COG:D, GO:0000910, GO:0000917, GO:0003924, GO:0005525, GO:0005737, GO:0032153, GO:0043093, GO:0051258, KEGG:K03531, RefSeq:WP_011276014.1, SO:0001217, UniParc:UPI000054BC2E, UniRef:UniRef100_A0A640MYB1, UniRef:UniRef50_Q2FZ89, UniRef:UniRef90_Q2FZ89 contig_1 cds 1581227 1582660 - GCA012955505_01845 ftsA cell division protein FtsA COG:COG0849, COG:D, GO:0005515, GO:0005524, GO:0043093, RefSeq:WP_011276015.1, SO:0001217, UniParc:UPI000054BC2F, UniRef:UniRef100_A0A640MTU3, UniRef:UniRef50_A0A640MTU3, UniRef:UniRef90_A0A640MTU3 contig_1 cds 1582764 1583915 - GCA012955505_01846 ftsQ Cell division protein DivIB COG:COG1589, COG:D, SO:0001217, UniRef:UniRef50_A0A7Z1N7T0, UniRef:UniRef90_A0A7Z1N7T0 contig_1 cds 1584052 1584702 - GCA012955505_01847 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase SO:0001217, UniRef:UniRef50_A0A7Z7W1G6, UniRef:UniRef90_UPI0022A69915 contig_1 cds 1584744 1585382 - GCA012955505_01848 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase SO:0001217, UniRef:UniRef50_A0A380E1D2, UniRef:UniRef90_UPI0022A67D45 contig_1 cds 1585384 1585890 - GCA012955505_01849 phospho-N-acetylmuramoyl-pentapeptide- transferase SO:0001217, UniRef:UniRef50_UPI001C588C18 contig_1 cds 1586034 1586342 - GCA012955505_01850 (pseudo) Phospho-N-acetylmuramoyl-pentapeptide-transferase EC:2.7.8.13, KEGG:K01000, SO:0001217, UniRef:UniRef50_A0A2X2K2T2, UniRef:UniRef90_A0A2X2K2T2 contig_1 cds 1586635 1588953 - GCA012955505_01851 pASTA serine-type D-Ala-D-Ala carboxypeptidase COG:COG2815, COG:M, EC:3.4.-.-, KEGG:K12552, RefSeq:WP_016930702.1, SO:0001217, UniParc:UPI00037FA8A5, UniRef:UniRef100_UPI00037FA8A5, UniRef:UniRef50_A0A640MVC3, UniRef:UniRef90_A0A640MVC3 contig_1 cds 1588934 1589335 - GCA012955505_01852 ftsL cell division protein FtsL COG:COG4839, COG:D, GO:0000910, GO:0016020, KEGG:K03586, RefSeq:WP_016930703.1, SO:0001217, UniParc:UPI0002F6AA8B, UniRef:UniRef100_A0A640MTS4, UniRef:UniRef50_Q2FZ95, UniRef:UniRef90_A0A2K4DGK9 contig_1 cds 1589349 1590284 - GCA012955505_01853 rsmH 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH COG:COG0275, COG:J, EC:2.1.1.199, GO:0005737, GO:0016434, GO:0070475, GO:0071424, KEGG:K03438, RefSeq:WP_011276021.1, SO:0001217, UniParc:UPI000054BC35, UniRef:UniRef100_Q4L5N0, UniRef:UniRef50_Q07876, UniRef:UniRef90_Q8CSX7 contig_1 cds 1590299 1590730 - GCA012955505_01854 mraZ division/cell wall cluster transcriptional repressor MraZ COG:COG2001, COG:J, GO:0000976, GO:0003700, GO:0005737, GO:0006355, GO:0009295, GO:2000143, RefSeq:WP_011276022.1, SO:0001217, UniParc:UPI000054BC36, UniRef:UniRef100_Q4L5M9, UniRef:UniRef50_Q8Y5L6, UniRef:UniRef90_Q2FZ97 contig_1 cds 1590860 1592347 - GCA012955505_01855 bshC bacillithiol biosynthesis cysteine-adding enzyme BshC COG:COG4365, COG:Q, EC:6.-.-.-, GO:0003824, GO:0016874, GO:0071793, KEGG:K22136, SO:0001217, UniRef:UniRef50_Q2FZ98, UniRef:UniRef90_Q4L5M8 contig_1 cds 1592617 1593060 + GCA012955505_01856 N-acetyltransferase EC:2.3.1.-, GO:0008080, GO:0016747, RefSeq:WP_011276024.1, SO:0001217, UniParc:UPI000054BC38, UniRef:UniRef100_Q4L5M7, UniRef:UniRef50_Q8CSY0, UniRef:UniRef90_Q4L5M7 contig_1 cds 1593143 1593664 - GCA012955505_01857 yjjG Noncanonical pyrimidine nucleotidase, YjjG family SO:0001217, UniRef:UniRef50_Q2FZA2 contig_1 cds 1593918 1594052 - GCA012955505_01858 phenol-soluble modulin PSM-beta-2 BlastRules:WP_011276027, GO:0005576, GO:0031640, GO:0042742, GO:0090729, KEGG:K20337, RefSeq:WP_011276027.1, SO:0001217, UniParc:UPI000012B3ED, UniRef:UniRef100_P11698, UniRef:UniRef50_P11698, UniRef:UniRef90_P11698 contig_1 cds 1594109 1594243 - GCA012955505_01859 phenol-soluble modulin PSM-beta-3 BlastRules:WP_011276028, GO:0005576, GO:0031640, GO:0042742, GO:0090729, KEGG:K20337, RefSeq:WP_011276028.1, SO:0001217, UniParc:UPI000054BC3B, UniRef:UniRef100_Q4L5M1, UniRef:UniRef50_P11699, UniRef:UniRef90_P11699 contig_1 cds 1594298 1594432 - GCA012955505_01860 phenol-soluble modulin PSM-beta-2 BlastRules:WP_011276027, GO:0005576, GO:0031640, GO:0042742, GO:0090729, KEGG:K20337, RefSeq:WP_011276027.1, SO:0001217, UniParc:UPI000012B3ED, UniRef:UniRef100_P11698, UniRef:UniRef50_P11698, UniRef:UniRef90_P11698 contig_1 cds 1594492 1594626 - GCA012955505_01861 phenol-soluble modulin PSM-beta-3 BlastRules:WP_011276028, GO:0005576, GO:0031640, GO:0042742, GO:0090729, KEGG:K20337, RefSeq:WP_011276028.1, SO:0001217, UniParc:UPI000054BC3B, UniRef:UniRef100_Q4L5M1, UniRef:UniRef50_P11699, UniRef:UniRef90_P11699 contig_1 tRNA 1595426 1595499 + GCA012955505_01862 trnR tRNA-Arg(tct) SO:0001036 contig_1 cds 1595783 1595995 - GCA012955505_01863 hypothetical protein contig_1 cds 1596175 1596735 - GCA012955505_01864 (pseudo) Cytosine-specific methyltransferase EC:2.1.1.37, KEGG:K00558, SO:0001217, UniRef:UniRef50_A0A0D4DCJ3, UniRef:UniRef90_A0A0D4DCJ3 contig_1 cds 1596678 1597022 - GCA012955505_01865 hypothetical protein contig_1 cds 1597334 1597672 + GCA012955505_01866 hypothetical protein contig_1 cds 1598107 1598616 - GCA012955505_01867 yfcE Phosphoesterase COG:COG0622, COG:R, KEGG:K07095, RefSeq:WP_037557951.1, SO:0001217, UniParc:UPI00044B59E6, UniRef:UniRef100_A0A640MT98, UniRef:UniRef50_Q2FZC4, UniRef:UniRef90_A0A7Z1N7S2 contig_1 cds 1598616 1599197 - GCA012955505_01868 rdgB XTP/dITP diphosphatase COG:COG0127, COG:F, EC:3.6.1.66, GO:0009143, GO:0047429, KEGG:K01519, RefSeq:WP_037557949.1, SO:0001217, UniParc:UPI000445F7F9, UniRef:UniRef100_A0A640MT53, UniRef:UniRef50_Q8CSY5, UniRef:UniRef90_A0A7T8UXZ4 contig_1 cds 1599214 1600014 - GCA012955505_01869 racE glutamate racemase COG:COG0796, COG:M, EC:5.1.1.3, GO:0008152, GO:0008360, GO:0008881, GO:0009252, GO:0071555, RefSeq:WP_011276088.1, SO:0001217, UniParc:UPI000054BC7A, UniRef:UniRef100_Q4L5F5, UniRef:UniRef50_Q6GHT5, UniRef:UniRef90_P52974 contig_1 cds 1600190 1601038 - GCA012955505_01870 sdhB succinate dehydrogenase iron-sulfur subunit COG:C, COG:COG0479, GO:0006099, GO:0009055, GO:0016491, GO:0051536, RefSeq:WP_016930705.1, SO:0001217, UniParc:UPI0002ECE889, UniRef:UniRef100_A0A640MV63, UniRef:UniRef50_P08066, UniRef:UniRef90_A0A1J4A061 contig_1 cds 1601038 1602804 - GCA012955505_01871 sdhA succinate dehydrogenase flavoprotein subunit COG:C, COG:COG1053, RefSeq:WP_011276090.1, SO:0001217, UniParc:UPI000054BC7C, UniRef:UniRef100_A0A640MTL8, UniRef:UniRef50_P08065, UniRef:UniRef90_A0A151A5R2 contig_1 cds 1602929 1603543 - GCA012955505_01872 sdhC Succinate dehydrogenase COG:C, COG:COG2009, RefSeq:WP_011276091.1, SO:0001217, UniParc:UPI000054BC7D, UniRef:UniRef100_A0A640MT75, UniRef:UniRef50_P08064, UniRef:UniRef90_A0A7Z1N800 contig_1 cds 1603925 1604935 - GCA012955505_01873 Excinuclease ABC subunit C SO:0001217, UniRef:UniRef50_A0A2X2M0J4 contig_1 cds 1604896 1605633 - GCA012955505_01874 uvrC (pseudo) excinuclease ABC subunit UvrC GO:0006289, GO:0009380, GO:0009381, KEGG:K03703, SO:0001217, UniRef:UniRef50_A0A4Y3T8E8, UniRef:UniRef90_UPI0015D6AA13 contig_1 cds 1605730 1606044 - GCA012955505_01875 trxA thioredoxin COG:COG3118, COG:O, GO:0005829, GO:0015035, GO:0045454, RefSeq:WP_011276093.1, SO:0001217, UniParc:UPI000054BC7F, UniRef:UniRef100_Q4L5F0, UniRef:UniRef50_P14949, UniRef:UniRef90_Q49WR2 contig_1 cds 1606240 1608591 - GCA012955505_01876 mutS2 endonuclease MutS2 COG:COG1193, COG:J, EC:3.1.-.-, GO:0004519, GO:0005524, GO:0006259, GO:0006298, GO:0016887, GO:0019843, GO:0030983, GO:0045910, GO:0140664, KEGG:K07456, RefSeq:WP_016930708.1, SO:0001217, UniParc:UPI00030F2357, UniRef:UniRef100_UPI00030F2357, UniRef:UniRef50_Q2FZD3, UniRef:UniRef90_Q4L5E9 contig_1 cds 1608601 1610313 - GCA012955505_01877 polX DNA polymerase/3'-5' exonuclease PolX COG:COG1796, COG:L, GO:0003677, GO:0003887, GO:0006281, RefSeq:WP_016930709.1, SO:0001217, UniParc:UPI0002F31586, UniRef:UniRef100_UPI0002F31586, UniRef:UniRef50_A0A0U1MIQ0, UniRef:UniRef90_A0A5B2YZI3 contig_1 cds 1610388 1610807 - GCA012955505_01878 cvpA CvpA family protein RefSeq:WP_261007114.1, SO:0001217, UniParc:UPI000A40CC4A, UniRef:UniRef100_UPI000A40CC4A, UniRef:UniRef50_A0A853V150, UniRef:UniRef90_UPI0015D875F4 contig_1 cds 1610792 1611079 - GCA012955505_01879 zapA cell division protein ZapA COG:COG3027, COG:D, GO:0051301, SO:0001217, UniRef:UniRef50_A0A085UFE6, UniRef:UniRef90_A0A2K4DKU0 contig_1 cds 1611357 1612289 + GCA012955505_01880 rnhC ribonuclease HIII EC:3.1.26.4, GO:0004523, GO:0005737, GO:0006401, KEGG:K03471, RefSeq:WP_016930712.1, SO:0001217, UniParc:UPI000310C1A7, UniRef:UniRef100_UPI000310C1A7, UniRef:UniRef50_Q2FZD7, UniRef:UniRef90_UPI001CA4BB5A contig_1 cds 1612510 1614912 - GCA012955505_01881 pheT phenylalanine--tRNA ligase subunit beta COG:COG0073, COG:J, EC:6.1.1.20, GO:0000049, GO:0000287, GO:0004826, GO:0005524, GO:0006432, GO:0009328, GO:0016740, KEGG:K01890, RefSeq:WP_016930713.1, SO:0001217, UniParc:UPI0002D39082, UniRef:UniRef100_UPI0002D39082, UniRef:UniRef50_Q4L5E4, UniRef:UniRef90_Q4L5E4 contig_1 cds 1614912 1615970 - GCA012955505_01882 pheS phenylalanine--tRNA ligase subunit alpha COG:COG0016, COG:J, EC:6.1.1.20, GO:0000049, GO:0000166, GO:0000287, GO:0004826, GO:0005524, GO:0005737, GO:0006432, GO:0016740, KEGG:K01889, RefSeq:WP_016930714.1, SO:0001217, UniParc:UPI00031B566B, UniRef:UniRef100_UPI00075D8895, UniRef:UniRef50_Q4L5E3, UniRef:UniRef90_Q4L5E3 contig_1 cds 1616335 1617075 - GCA012955505_01883 spoU RNA methyltransferase COG:COG0566, COG:J, RefSeq:WP_016930715.1, SO:0001217, UniParc:UPI0002FD9628, UniRef:UniRef100_UPI0015D94FCF, UniRef:UniRef50_A0A098H324, UniRef:UniRef90_A0A2A1KCI2 contig_1 cds 1617231 1617404 - GCA012955505_01884 rpmF 50S ribosomal protein L32 COG:COG0333, COG:J, GO:0003735, GO:0006412, GO:0015934, RefSeq:WP_002435373.1, SO:0001217, UniParc:UPI000054BC88, UniRef:UniRef100_Q4L5E1, UniRef:UniRef50_P49228, UniRef:UniRef90_Q2FZF1 contig_1 cds 1617487 1618041 - GCA012955505_01885 yceD YlbN-like protein COG:COG1399, COG:J, RefSeq:WP_016930716.1, SO:0001217, UniParc:UPI00030D8374, UniRef:UniRef100_UPI000754F7D9, UniRef:UniRef50_Q2FZF3, UniRef:UniRef90_A0A380G045 contig_1 cds 1618182 1619216 + GCA012955505_01886 nucleotidyltransferase EC:6.3.1.22, KEGG:K27343, SO:0001217, UniRef:UniRef50_Q2FZF4, UniRef:UniRef90_UPI001F0A8137 contig_1 cds 1619318 1619803 - GCA012955505_01887 coaD pantetheine-phosphate adenylyltransferase COG:COG0669, COG:H, EC:2.7.7.3, GO:0004595, GO:0005524, GO:0005737, GO:0015937, KEGG:K00954, RefSeq:WP_016930718.1, SO:0001217, UniParc:UPI00030D90BE, UniRef:UniRef100_UPI00030D90BE, UniRef:UniRef50_Q2FZF5, UniRef:UniRef90_Q4L5D8 contig_1 cds 1619796 1620347 - GCA012955505_01888 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD COG:COG0742, COG:J, EC:2.1.1.171, GO:0031167, GO:0052913, KEGG:K08316, RefSeq:WP_011276105.1, SO:0001217, UniParc:UPI000054BC8C, UniRef:UniRef100_A0A7T8ZNM6, UniRef:UniRef50_A0A9N8IIV2, UniRef:UniRef90_A0A380G150 contig_1 cds 1620417 1620806 + GCA012955505_01889 Phage protein RefSeq:WP_011276106.1, SO:0001217, UniParc:UPI000054BC8D, UniRef:UniRef100_A0A7Z1SFK5, UniRef:UniRef50_B9DPZ2, UniRef:UniRef90_A0A7Z1SFK5 contig_1 cds 1620809 1621060 - GCA012955505_01890 ylbG UPF0298 protein B8W97_07220 COG:COG4471, COG:S, RefSeq:WP_011276107.1, SO:0001217, UniParc:UPI000054BC8E, UniRef:UniRef100_A0A7Z1SEE3, UniRef:UniRef50_Q2FZF8, UniRef:UniRef90_A0A2A1KCI0 contig_1 cds 1621246 1622121 + GCA012955505_01891 ugpQ Glycerophosphodiester phosphodiesterase COG:COG0584, COG:I, RefSeq:WP_342368075.1, SO:0001217, UniParc:UPI000B222C54, UniRef:UniRef100_UPI000B222C54, UniRef:UniRef50_A0A3A3AIN7, UniRef:UniRef90_A0A2A1K974 contig_1 cds 1622182 1622619 - GCA012955505_01892 ylbF Regulator COG:COG3679, COG:T, RefSeq:WP_011276109.1, SO:0001217, UniParc:UPI000054BC90, UniRef:UniRef100_A0A2A1K7G6, UniRef:UniRef50_Q2FZG0, UniRef:UniRef90_A0A2A1K7G6 contig_1 cds 1622647 1623024 - GCA012955505_01893 SCP domain-containing protein SO:0001217, UniRef:UniRef50_G5JGR9 contig_1 cds 1623073 1623480 - GCA012955505_01894 hypothetical protein PFAM:PF14504.11 contig_1 cds 1623669 1624130 - GCA012955505_01895 ctaM DUF420 domain-containing protein COG:COG2322, COG:O, KEGG:K08976, RefSeq:WP_011276111.1, SO:0001217, UniParc:UPI000054BC92, UniRef:UniRef100_A0A2A1K9V2, UniRef:UniRef50_Q2FZG3, UniRef:UniRef90_A0A2A1K9V2 contig_1 cds 1624160 1625071 - GCA012955505_01896 cyoE heme o synthase COG:COG0109, COG:HI, EC:2.5.1.141, GO:0005886, GO:0006783, GO:0008495, GO:0016020, GO:0048034, RefSeq:WP_011276112.1, SO:0001217, UniParc:UPI000054BC93, UniRef:UniRef100_Q4L5D0, UniRef:UniRef50_Q8CPM1, UniRef:UniRef90_Q4L5D0 contig_1 cds 1625301 1626233 + GCA012955505_01897 Heme A synthase EC:1.17.99.9, KEGG:K02259, SO:0001217, UniRef:UniRef50_Q2G2C0, UniRef:UniRef90_A0A5B2Z156 contig_1 cds 1626358 1629807 - GCA012955505_01898 pycA pyruvate carboxylase COG:C, COG:COG1038, EC:6.4.1.1, GO:0004736, GO:0005524, GO:0006090, GO:0006094, GO:0009374, GO:0046872, KEGG:K01958, RefSeq:WP_016930719.1, SO:0001217, UniParc:UPI0003129779, UniRef:UniRef100_UPI00313404F7, UniRef:UniRef50_A0A0H3JRU9, UniRef:UniRef90_Q4L5C8 contig_1 cds 1630231 1631376 - GCA012955505_01899 ftsW putative peptidoglycan glycosyltransferase FtsW COG:COG0772, COG:D, KEGG:K03588, SO:0001217, UniRef:UniRef50_A0AAE8PBF8, UniRef:UniRef90_A0A2A1KAI0 contig_1 cds 1631578 1631856 - GCA012955505_01900 UPF0358 protein FOB69_08800 RefSeq:WP_016930721.1, SO:0001217, UniParc:UPI000305BFED, UniRef:UniRef100_UPI000305BFED, UniRef:UniRef50_Q49WN7, UniRef:UniRef90_A0A657M747 contig_1 cds 1631997 1632482 + GCA012955505_01901 Peptidyl-prolyl cis-trans isomerase RefSeq:WP_016930722.1, SO:0001217, UniParc:UPI0002E9E04F, UniRef:UniRef100_UPI0034D490E5, UniRef:UniRef50_B9DPZ4, UniRef:UniRef90_A0A2K0A8X0 contig_1 cds 1632484 1632675 + GCA012955505_01902 DUF2197 domain-containing protein RefSeq:WP_016930723.1, SO:0001217, UniParc:UPI000301548D, UniRef:UniRef100_UPI000301548D, UniRef:UniRef50_A0A1S1GS17, UniRef:UniRef90_UPI00069DF41E contig_1 cds 1632924 1634768 - GCA012955505_01903 typA translational GTPase TypA COG:COG1217, COG:T, GO:0003924, GO:0005525, GO:0006412, GO:0006950, RefSeq:WP_016930724.1, SO:0001217, UniParc:UPI000307C9C2, UniRef:UniRef100_UPI000755C2FF, UniRef:UniRef50_A0A0R2DHU7, UniRef:UniRef90_A0A2A1K7F6 contig_1 cds 1634866 1635057 + GCA012955505_01904 ylaF YlaF family protein RefSeq:WP_011276120.1, SO:0001217, UniParc:UPI000054BC9B, UniRef:UniRef100_A0A2A1KCG2, UniRef:UniRef50_K9ANU3, UniRef:UniRef90_A0A2A1KCG2 contig_1 cds 1635129 1635944 - GCA012955505_01905 suhB Inositol monophosphatase COG:COG0483, COG:G, EC:3.1.3.25, KEGG:K01092, RefSeq:WP_016930725.1, SO:0001217, UniParc:UPI0002D6B3F1, UniRef:UniRef100_UPI00187A5AA6, UniRef:UniRef50_A0A654A156, UniRef:UniRef90_A0A2A1K9U3 contig_1 cds 1636122 1636733 + GCA012955505_01906 yktB UPF0637 protein SH1846 COG:COG4493, COG:S, RefSeq:WP_016930726.1, SO:0001217, UniParc:UPI0002DD4633, UniRef:UniRef100_UPI0015D9553C, UniRef:UniRef50_Q2G2G7, UniRef:UniRef90_Q4L5C0 contig_1 cds 1637055 1638395 + GCA012955505_01907 mntH Nramp family divalent metal transporter COG:COG1914, COG:P, GO:0005384, GO:0005886, GO:0015086, GO:0015293, GO:0016020, GO:0022857, GO:0034755, GO:0046872, GO:0055085, RefSeq:WP_016930727.1, SO:0001217, UniParc:UPI0002E4A6D4, UniRef:UniRef100_UPI0002E4A6D4, UniRef:UniRef50_Q03DK0, UniRef:UniRef90_Q4L5B9 contig_1 cds 1638617 1639102 - GCA012955505_01908 DUF4064 domain-containing protein RefSeq:WP_016930728.1, SO:0001217, UniParc:UPI0002F432F6, UniRef:UniRef100_UPI000A11D60E, UniRef:UniRef50_A0A2A1K7H6, UniRef:UniRef90_UPI000A1F0ED8 contig_1 cds 1639228 1640406 - GCA012955505_01909 DUF4064 domain-containing protein SO:0001217, UniRef:UniRef50_A0A2A1KAG9 contig_1 cds 1640479 1641552 - GCA012955505_01910 potD Spermidine:putrescine-binding protein COG:COG0687, COG:E, SO:0001217, UniRef:UniRef50_Q5HQ67, UniRef:UniRef90_Q4L5B6 contig_1 cds 1641549 1642361 - GCA012955505_01911 potC Spermidine/putrescine ABC transporter permease COG:COG1177, COG:E, RefSeq:WP_016930731.1, SO:0001217, UniParc:UPI000317BC00, UniRef:UniRef100_UPI000317BC00, UniRef:UniRef50_S2XKD8, UniRef:UniRef90_A0A380G0K7 contig_1 cds 1642367 1642960 - GCA012955505_01912 potB (pseudo) Spermidine/putrescine ABC transporter permease protein COG:COG1176, COG:E, SO:0001217, UniRef:UniRef50_S2XR89, UniRef:UniRef90_Q4L5B4 contig_1 cds 1642950 1643156 - GCA012955505_01913 hypothetical protein contig_1 cds 1643149 1643880 - GCA012955505_01914 ABC transporter ATP-binding protein SO:0001217, UniRef:UniRef50_A0A3C0IZZ2, UniRef:UniRef90_UPI0004F3C67E contig_1 cds 1643923 1644246 - GCA012955505_01915 potA Spermidine/putrescine import ATP-binding protein potA SO:0001217, UniRef:UniRef50_A0A2X2K656 contig_1 cds 1644262 1644801 - GCA012955505_01916 qdoI Putative DNA-binding protein COG:COG1917, COG:R, RefSeq:WP_016930734.1, SO:0001217, UniParc:UPI000319FCA7, UniRef:UniRef100_UPI000319FCA7, UniRef:UniRef50_Q2G2A6, UniRef:UniRef90_A0A380G2R5 contig_1 cds 1644938 1645195 - GCA012955505_01917 hypothetical protein contig_1 cds 1645380 1645616 - GCA012955505_01918 Pyridine nucleotide-disulphide oxidoreductase dimerisation domain-containing protein SO:0001217, UniRef:UniRef50_A0A0A3XEC6 contig_1 cds 1645667 1645888 - GCA012955505_01919 hypothetical protein PFAM:PF07992.20 contig_1 cds 1645986 1646912 - GCA012955505_01920 hypothetical protein PFAM:PF00198.28, PFAM:PF00364.28, PFAM:PF13533.12 contig_1 cds 1647105 1648082 - GCA012955505_01921 pdhB Pyruvate dehydrogenase E1 component subunit beta COG:C, COG:COG0022, EC:1.2.4.1, GO:0004739, RefSeq:WP_011276134.1, SO:0001217, UniParc:UPI000054BCA9, UniRef:UniRef100_A0A2A1K630, UniRef:UniRef50_Q5HQ75, UniRef:UniRef90_Q5HQ75 contig_1 cds 1648086 1648880 - GCA012955505_01922 2-oxoisovalerate dehydrogenase subunit alpha SO:0001217, UniRef:UniRef50_A0A091C508 contig_1 cds 1648916 1649116 - GCA012955505_01923 hypothetical protein contig_1 cds 1649509 1649838 - GCA012955505_01924 ykyA (pseudo) YkyA family protein SO:0001217, UniRef:UniRef50_A0A1S2MKA7, UniRef:UniRef90_UPI00190E5052 contig_1 cds 1649822 1649917 - GCA012955505_01925 hypothetical protein contig_1 cds 1650148 1651827 + GCA012955505_01926 rnjA ribonuclease J1 COG:COG0595, COG:J, EC:3.1.-.-, GO:0003723, GO:0004521, GO:0004534, GO:0005737, GO:0006364, GO:0008270, RefSeq:WP_011276138.1, SO:0001217, UniParc:UPI000054BCAE, UniRef:UniRef100_Q4L5A3, UniRef:UniRef50_Q2FZG9, UniRef:UniRef90_Q49WL3 contig_1 ncRNA 1651912 1652132 - GCA012955505_01927 tsr24 S. aureus tsr24 small RNA RFAM:RF02577, SO:0000655 contig_1 cds 1652138 1652362 + GCA012955505_01928 Transposase for IS1272 SO:0001217, UniParc:UPI000054BCB0, UniRef:UniRef100_Q4L5A1, UniRef:UniRef50_Q4L5A1, UniRef:UniRef90_Q4L5A1 contig_1 cds 1652815 1653474 - GCA012955505_01929 trkA TrkA family potassium uptake protein COG:COG0569, COG:PT, RefSeq:WP_011276142.1, SO:0001217, UniParc:UPI000054BCB2, UniRef:UniRef100_A0A2A1K828, UniRef:UniRef50_Q2FZH1, UniRef:UniRef90_Q2FZH1 contig_1 cds 1653600 1654616 - GCA012955505_01930 appB Cytochrome D ubiquinol oxidase subunit II COG:C, COG:COG1294, EC:7.1.1.7, KEGG:K00426, RefSeq:WP_011276143.1, SO:0001217, UniParc:UPI000054BCB3, UniRef:UniRef100_A0A2A1K7I5, UniRef:UniRef50_A0AAJ5RM05, UniRef:UniRef90_A0A2A1K7I5 contig_1 cds 1654616 1655968 - GCA012955505_01931 appC Cytochrome D ubiquinol oxidase subunit I COG:C, COG:COG1271, EC:7.1.1.7, KEGG:K00425, RefSeq:WP_016930740.1, SO:0001217, UniParc:UPI0003112253, UniRef:UniRef100_A0A2A1K3W2, UniRef:UniRef50_A0A2S5D5L8, UniRef:UniRef90_A0A380G2H6 contig_1 cds 1656131 1656238 + GCA012955505_01932 hypothetical protein contig_1 cds 1656592 1656966 - GCA012955505_01933 recombinase family protein SO:0001217, UniRef:UniRef50_A0A0R2JX82, UniRef:UniRef90_UPI001F218D0B contig_1 cds 1657186 1657476 - GCA012955505_01934 Penicillinase repressor SO:0001217, UniRef:UniRef50_P0A042 contig_1 cds 1657466 1657798 - GCA012955505_01935 blaR1 Regulatory protein BlaR1 EC:1.7.2.5, KEGG:K04561, RefSeq:WP_017466654.1, SO:0001217, UniParc:UPI0002D435A5, UniRef:UniRef100_A0A380EAL2, UniRef:UniRef50_A0A380EAL2, UniRef:UniRef90_A0A380EAL2 contig_1 cds 1659008 1659103 + GCA012955505_01936 hypothetical protein contig_1 cds 1659181 1659474 + GCA012955505_01937 transposase SO:0001217, UniRef:UniRef50_A0A9Q5JM32, UniRef:UniRef90_UPI0021B1FAF0 contig_1 cds 1659451 1661166 - GCA012955505_01938 ptsA Phosphoenolpyruvate-protein phosphotransferase COG:COG1080, COG:G, RefSeq:WP_145463296.1, SO:0001217, UniParc:UPI00119FAD08, UniRef:UniRef100_UPI00119FAD08, UniRef:UniRef50_P23533, UniRef:UniRef90_A0A1K2A0V1 contig_1 cds 1661169 1661435 - GCA012955505_01939 ptsH phosphocarrier protein HPr COG:COG1925, COG:TG, GO:0005737, GO:0009401, RefSeq:WP_011276148.1, SO:0001217, UniParc:UPI000054BCB8, UniRef:UniRef100_A0A2A1KAA2, UniRef:UniRef50_Q9F166, UniRef:UniRef90_P23534 contig_1 cds 1661692 1662234 - GCA012955505_01940 DUF697 domain-containing protein RefSeq:WP_145463297.1, SO:0001217, UniParc:UPI0011A6D87E, UniRef:UniRef100_UPI0011A6D87E, UniRef:UniRef50_A0AAE5M2R9, UniRef:UniRef90_A0A2A1K512 contig_1 cds 1662292 1663464 - GCA012955505_01941 rlmK Class I SAM-dependent rRNA methyltransferase COG:COG1092, COG:J, RefSeq:WP_011276150.1, SO:0001217, UniParc:UPI000054BCBA, UniRef:UniRef100_A0A2A1K6Z0, UniRef:UniRef50_Q2FZH8, UniRef:UniRef90_A0A2A1K6Z0 contig_1 cds 1663552 1664472 - GCA012955505_01942 auxA lipoteichoic acid stability factor AuxA SO:0001217, UniRef:UniRef50_UPI000D72A40C, UniRef:UniRef90_UPI000E68926D contig_1 ncRNA 1663967 1664094 + GCA012955505_01943 sau-59 Staphylococcus sRNA sau-59 RFAM:RF02393, SO:0000655 contig_1 cds 1664430 1664759 - GCA012955505_01944 hypothetical protein contig_1 cds 1664909 1665028 + GCA012955505_01945 graF glycopeptide resistance-associated protein GraF RefSeq:WP_011276152.1, SO:0001217, UniParc:UPI000054BCBC, UniRef:UniRef100_A0A7Z1S9J2, UniRef:UniRef50_A0A2K0A8W8, UniRef:UniRef90_A0A2K0A8W8 contig_1 ncRNA-region 1665318 1665417 + TPP riboswitch aptamer (THI element) RFAM:RF00059, SO:0000035 contig_1 cds 1665504 1666079 + GCA012955505_01946 ykoE Thiamine ABC transporter permease COG:COG4721, COG:H, KEGG:K16925, RefSeq:WP_011276153.1, SO:0001217, UniParc:UPI000054BCBD, UniRef:UniRef100_A0A2A1K8Z9, UniRef:UniRef50_Q2FZI2, UniRef:UniRef90_A0A2A1K8Z9 contig_1 cds 1666092 1667495 + GCA012955505_01947 ccmA heme ABC exporter ATP-binding protein CcmA COG:COG1122, COG:PR, EC:7.6.2.5, GO:0015439, GO:0015886, GO:0017004, GO:0022857, GO:0043190, RefSeq:WP_011276154.1, SO:0001217, UniParc:UPI000054BCBE, UniRef:UniRef100_A0A2A1K8E5, UniRef:UniRef50_S2XKC2, UniRef:UniRef90_A0A2A1K8E5 contig_1 cds 1667488 1668297 + GCA012955505_01948 ecfT Cobalt ABC transporter permease COG:COG0619, COG:H, KEGG:K16785, RefSeq:WP_011276155.1, SO:0001217, UniParc:UPI000054BCBF, UniRef:UniRef100_A0A2A1K527, UniRef:UniRef50_S2XR66, UniRef:UniRef90_A0A2A1K527 contig_1 cds 1668347 1669591 - GCA012955505_01949 purD Phosphoribosylamine--glycine ligase COG:COG0151, COG:F, SO:0001217, UniRef:UniRef50_P65895, UniRef:UniRef90_A0A2A1K6S1 contig_1 cds 1669622 1671100 - GCA012955505_01950 purH bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase COG:COG0138, COG:F, EC:2.1.2.3, EC:3.5.4.10, GO:0003824, GO:0003937, GO:0004643, GO:0005829, GO:0006164, GO:0006189, KEGG:K00602, RefSeq:WP_011276157.1, SO:0001217, UniParc:UPI000054BCC1, UniRef:UniRef100_Q4L582, UniRef:UniRef50_P67543, UniRef:UniRef90_Q4L582 contig_1 cds 1671116 1671682 - GCA012955505_01951 purN phosphoribosylglycinamide formyltransferase COG:COG0299, COG:F, EC:2.1.2.2, GO:0004644, GO:0006189, RefSeq:WP_011276158.1, SO:0001217, UniParc:UPI000054BCC2, UniRef:UniRef100_A0A2A1K7P2, UniRef:UniRef50_Q5HQ98, UniRef:UniRef90_A0A2A1K7P2 contig_1 cds 1671682 1672713 - GCA012955505_01952 purM Phosphoribosylformylglycinamidine cyclo-ligase COG:COG0150, COG:F, EC:6.3.3.1, GO:0004637, GO:0004641, GO:0005524, GO:0005829, GO:0006189, GO:0046084, RefSeq:WP_011276159.1, SO:0001217, UniParc:UPI000054BCC3, UniRef:UniRef100_Q4L580, UniRef:UniRef50_Q8Y6C3, UniRef:UniRef90_Q4L580 contig_1 cds 1672706 1674190 - GCA012955505_01953 purF amidophosphoribosyltransferase COG:COG0034, COG:F, EC:2.4.2.14, GO:0004044, GO:0009113, KEGG:K00764, RefSeq:WP_011276160.1, SO:0001217, UniParc:UPI000054BCC4, UniRef:UniRef100_A0A2A1K525, UniRef:UniRef50_Q5HQA0, UniRef:UniRef90_A0A2A1K525 contig_1 cds 1674169 1676358 - GCA012955505_01954 purL phosphoribosylformylglycinamidine synthase subunit PurL COG:COG0046, COG:F, EC:6.3.5.3, GO:0000287, GO:0004642, GO:0005524, GO:0005737, GO:0006189, RefSeq:WP_011276161.1, SO:0001217, UniParc:UPI000054BCC5, UniRef:UniRef100_Q4L578, UniRef:UniRef50_Q2FZJ0, UniRef:UniRef90_Q4L578 contig_1 cds 1676351 1677022 - GCA012955505_01955 purQ phosphoribosylformylglycinamidine synthase subunit PurQ COG:COG0047, COG:F, EC:3.5.1.2, EC:6.3.5.3, GO:0004359, GO:0004642, GO:0005524, GO:0005737, GO:0006189, RefSeq:WP_145414871.1, SO:0001217, UniParc:UPI0011A40765, UniRef:UniRef100_UPI0011A40765, UniRef:UniRef50_P12041, UniRef:UniRef90_Q4L577 contig_1 cds 1677024 1677284 - GCA012955505_01956 purS phosphoribosylformylglycinamidine synthase subunit PurS COG:COG1828, COG:F, EC:6.3.5.3, RefSeq:WP_011276163.1, SO:0001217, UniParc:UPI000054BCC7, UniRef:UniRef100_A0A2A1K909, UniRef:UniRef50_A0A239ZQS9, UniRef:UniRef90_A0A0D6XMJ6 contig_1 cds 1677305 1677988 - GCA012955505_01957 purC phosphoribosylaminoimidazolesuccinocarboxamide synthase COG:COG0152, COG:F, EC:6.3.2.6, GO:0004639, GO:0005524, GO:0006164, GO:0006189, GO:0009236, SO:0001217, UniRef:UniRef50_Q8REV1, UniRef:UniRef90_Q4L575 contig_1 cds 1677992 1678708 - GCA012955505_01958 Phosphoribosylaminoimidazolesuccinocarboxamide synthase SO:0001217, UniRef:UniRef50_A0A380E1P6 contig_1 cds 1678705 1679085 - GCA012955505_01959 hypothetical protein PFAM:PF02826.25, PFAM:PF03446.21, PFAM:PF22660.2 contig_1 cds 1679072 1679554 - GCA012955505_01960 purE N5-carboxyaminoimidazole ribonucleotide mutase COG:COG0041, COG:F, RefSeq:WP_011276166.1, SO:0001217, UniParc:UPI000054BCCA, UniRef:UniRef100_A0A2A1K6T1, UniRef:UniRef50_P43849, UniRef:UniRef90_A0A1K1YET7 contig_1 cds 1679766 1680623 + GCA012955505_01961 folD bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD COG:COG0190, COG:H, GO:0000105, GO:0004477, GO:0004488, GO:0005829, GO:0006164, GO:0009086, GO:0035999, RefSeq:WP_016931330.1, SO:0001217, UniParc:UPI0003184ADB, UniRef:UniRef100_A0A2A1K7H9, UniRef:UniRef50_Q2FZJ6, UniRef:UniRef90_Q2FZJ6 contig_1 cds 1680885 1681130 + GCA012955505_01962 Transposase DDE domain-containing protein SO:0001217, UniRef:UniRef50_A0A9Q5JM32 contig_1 cds 1681149 1682294 - GCA012955505_01963 fpr nitric oxide dioxygenase COG:C, COG:COG1018, EC:1.14.12.17, KEGG:K05916, RefSeq:WP_037557890.1, SO:0001217, UniParc:UPI00044D3EEC, UniRef:UniRef100_UPI0007582E47, UniRef:UniRef50_Q2G2P2, UniRef:UniRef90_A0A2A1K5S5 contig_1 cds 1682416 1682733 + GCA012955505_01964 DUF5011 domain-containing protein RefSeq:WP_011276172.1, SO:0001217, UniParc:UPI000054BCD0, UniRef:UniRef100_A0A2A1K3X7, UniRef:UniRef50_Q49WI5, UniRef:UniRef90_A0A2A1K3X7 contig_1 cds 1683029 1684153 + GCA012955505_01965 qoxA cytochrome aa3 quinol oxidase subunit II COG:C, COG:COG1622, EC:1.10.3.-, GO:0004129, GO:0005507, GO:0005886, GO:0009055, GO:0009486, GO:0015078, GO:0015990, GO:0016020, GO:0016682, GO:0042773, KEGG:K02826, RefSeq:WP_011276173.1, SO:0001217, UniParc:UPI000054BCD1, UniRef:UniRef100_Q4L565, UniRef:UniRef50_Q2FZJ9, UniRef:UniRef90_Q4L565 contig_1 cds 1684153 1686141 + GCA012955505_01966 qoxB cytochrome aa3 quinol oxidase subunit I COG:C, COG:COG0843, EC:1.10.3.-, GO:0004129, GO:0005507, GO:0005886, GO:0006119, GO:0015990, GO:0016020, GO:0016682, GO:0020037, GO:0022904, KEGG:K02827, RefSeq:WP_011276174.1, SO:0001217, UniParc:UPI000054BCD2, UniRef:UniRef100_Q4L564, UniRef:UniRef50_E0TW66, UniRef:UniRef90_Q2FZK0 contig_1 cds 1686131 1686736 + GCA012955505_01967 qoxC cytochrome aa3 quinol oxidase subunit III COG:C, COG:COG1845, EC:1.10.3.-, GO:0004129, GO:0005886, GO:0009055, GO:0015078, GO:0015990, GO:0016020, GO:0016682, GO:0019646, GO:0042773, RefSeq:WP_011276175.1, SO:0001217, UniParc:UPI000054BCD3, UniRef:UniRef100_Q4L563, UniRef:UniRef50_P34958, UniRef:UniRef90_Q4L563 contig_1 cds 1686733 1687023 + GCA012955505_01968 qoxD cytochrome aa3 quinol oxidase subunit IV COG:C, COG:COG3125, EC:1.10.3.-, GO:0005886, GO:0009319, GO:0009486, GO:0015078, GO:0015990, GO:0016020, GO:0016682, GO:0019646, GO:0042773, KEGG:K02829, RefSeq:WP_011276176.1, SO:0001217, UniParc:UPI000054BCD4, UniRef:UniRef100_Q4L562, UniRef:UniRef50_Q2FZK2, UniRef:UniRef90_Q5HQB2 contig_1 cds 1687166 1688065 + GCA012955505_01969 rihC ribonucleoside hydrolase RihC COG:COG1957, COG:F, EC:3.2.2.-, GO:0016799, RefSeq:WP_037557888.1, SO:0001217, UniParc:UPI00044F8F05, UniRef:UniRef100_A0A7Z1SDU9, UniRef:UniRef50_Q4L561, UniRef:UniRef90_Q4L561 contig_1 cds 1688128 1689015 - GCA012955505_01970 serine hydrolase SO:0001217, UniRef:UniRef50_UPI0018EE881A, UniRef:UniRef90_UPI0018EE881A contig_1 cds 1689473 1690252 + GCA012955505_01971 LCP family protein SO:0001217, UniRef:UniRef50_A0A9Q9F1Z3 contig_1 cds 1690261 1690617 + GCA012955505_01972 hypothetical protein contig_1 cds 1690636 1691106 + GCA012955505_01973 DUF2538 domain-containing protein RefSeq:WP_011276180.1, SO:0001217, UniParc:UPI000054BCD8, UniRef:UniRef100_A0A2A1K8B2, UniRef:UniRef50_P0A0Q4, UniRef:UniRef90_A0AAE5JJC3 contig_1 cds 1691250 1691381 + GCA012955505_01974 hypothetical protein contig_1 cds 1691513 1695598 + GCA012955505_01975 cwlA Bifunctional autolysin COG:COG5632, COG:M, RefSeq:WP_011276182.1, SO:0001217, UniParc:UPI000054BCDA, UniRef:UniRef100_Q4L555, UniRef:UniRef50_P0C5Z8, UniRef:UniRef90_Q4L555 contig_1 cds 1695807 1696226 - GCA012955505_01976 marR ATL autolysin transcription regulator COG:COG1846, COG:K, RefSeq:WP_011276183.1, SO:0001217, UniParc:UPI000054BCDB, UniRef:UniRef100_A0A7Z1N3V5, UniRef:UniRef50_Q2FZK9, UniRef:UniRef90_A0A380G275 contig_1 cds 1696397 1696837 - GCA012955505_01977 tspO Tryptophan-rich sensory protein COG:COG3476, COG:T, RefSeq:WP_227489852.1, SO:0001217, UniParc:UPI0003140694, UniRef:UniRef100_A0A2A1K6R8, UniRef:UniRef50_K9AQW2, UniRef:UniRef90_Q4L552 contig_1 cds 1697078 1697953 + GCA012955505_01978 Acyltransferase 3 domain-containing protein SO:0001217, UniRef:UniRef50_Q2FZL0 contig_1 cds 1698069 1699232 + GCA012955505_01979 aspB Aminotransferase COG:COG0436, COG:E, RefSeq:WP_011276186.1, SO:0001217, UniParc:UPI000054BCDE, UniRef:UniRef100_Q4L550, UniRef:UniRef50_Q4L550, UniRef:UniRef90_Q4L550 contig_1 cds 1699333 1699584 + GCA012955505_01980 Transposase for ISSha1 SO:0001217, UniRef:UniRef50_Q4L8F7, UniRef:UniRef90_Q4L8F7 contig_1 cds 1699709 1700527 - GCA012955505_01981 menB 1,4-dihydroxy-2-naphthoyl-CoA synthase COG:COG0447, COG:H, EC:4.1.3.36, GO:0005829, GO:0008935, GO:0009234, KEGG:K01661, RefSeq:WP_011276187.1, SO:0001217, UniParc:UPI000054BCDF, UniRef:UniRef100_Q4L549, UniRef:UniRef50_Q5HH38, UniRef:UniRef90_Q5HH38 contig_1 cds 1700520 1701323 - GCA012955505_01982 menH 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase COG:COG0596, COG:HR, EC:4.2.99.20, GO:0009234, GO:0070205, RefSeq:WP_011276188.1, SO:0001217, UniParc:UPI000054BCE0, UniRef:UniRef100_A0A2A1K5E7, UniRef:UniRef50_A0A380H942, UniRef:UniRef90_A0A2A1K5E7 contig_1 cds 1701310 1702314 - GCA012955505_01983 thiamine pyrophosphate-dependent enzyme SO:0001217, UniRef:UniRef50_UPI0004AC3FAB contig_1 cds 1702347 1702964 - GCA012955505_01984 thiamine pyrophosphate-binding protein SO:0001217, UniRef:UniRef50_UPI00094EA4B8 contig_1 cds 1702954 1703253 - GCA012955505_01985 hypothetical protein PFAM:PF00425.24 contig_1 cds 1703370 1704290 - GCA012955505_01986 chorismate-binding protein SO:0001217, UniRef:UniRef50_A0A380DZI6, UniRef:UniRef90_UPI000E6A5D6A contig_1 cds 1704445 1705383 + GCA012955505_01987 menA 1,4-dihydroxy-2-naphthoate polyprenyltransferase COG:COG1575, COG:H, EC:2.5.1.74, RefSeq:WP_016931372.1, SO:0001217, UniParc:UPI0002E98CD0, UniRef:UniRef100_A0A2A1K7Z5, UniRef:UniRef50_Q2FZM0, UniRef:UniRef90_A0A2A1K7Z5 contig_1 cds 1705482 1706036 - GCA012955505_01988 rimI N-acetyltransferase COG:COG0456, COG:J, RefSeq:WP_016931371.1, SO:0001217, UniParc:UPI0002FBC09B, UniRef:UniRef100_A0A2A1KAL2, UniRef:UniRef50_B9DQ78, UniRef:UniRef90_A0A2A1KAL2 contig_1 cds 1706223 1706453 + GCA012955505_01989 TM2 domain-containing protein RefSeq:WP_016931370.1, SO:0001217, UniParc:UPI0002D6502B, UniRef:UniRef100_UPI0002D6502B, UniRef:UniRef50_G5JHB1, UniRef:UniRef90_A0A974KWI6 contig_1 cds 1706532 1706633 + GCA012955505_01990 SAR1012 family small protein RefSeq:WP_011276194.1, SO:0001217, UniParc:UPI000054BCE6, UniRef:UniRef100_Q4L542, UniRef:UniRef50_Q4L542, UniRef:UniRef90_Q4L542 contig_1 cds 1706710 1706928 - GCA012955505_01991 IDEAL domain protein RefSeq:WP_011276195.1, SO:0001217, UniParc:UPI000054BCE7, UniRef:UniRef100_A0A2A1K7C0, UniRef:UniRef50_Q2FZN8, UniRef:UniRef90_A0A2A1K7C0 contig_1 cds 1707142 1707726 + GCA012955505_01992 comK Competence protein ComK COG:COG4903, COG:K, RefSeq:WP_011276196.1, SO:0001217, UniParc:UPI000054BCE8, UniRef:UniRef100_A0A2A1KAP4, UniRef:UniRef50_Q2FZN9, UniRef:UniRef90_A0A2A1KAP4 contig_1 tRNA 1707879 1707953 + GCA012955505_01993 trnN tRNA-Asn(gtt) SO:0000257 contig_1 tRNA 1707957 1708045 + GCA012955505_01994 trnS tRNA-Ser(gct) SO:0000269 contig_1 cds 1709078 1709335 + GCA012955505_01995 hypothetical protein contig_1 cds 1709502 1710491 - GCA012955505_01996 lplA lipoate--protein ligase COG:COG0095, COG:H, EC:6.3.1.20, KEGG:K03800, SO:0001217, UniRef:UniRef50_O07608, UniRef:UniRef90_Q4L535 contig_1 cds 1710692 1710868 + GCA012955505_01997 ykvS DUF2187 domain-containing protein COG:COG4873, COG:S, RefSeq:WP_011276202.1, SO:0001217, UniParc:UPI000054BCEE, UniRef:UniRef100_A0A2A1K740, UniRef:UniRef50_Q2FZN6, UniRef:UniRef90_Q2FZN6 contig_1 cds 1710885 1711487 + GCA012955505_01998 CPBP family intramembrane metalloprotease RefSeq:WP_011276203.1, SO:0001217, UniParc:UPI000054BCEF, UniRef:UniRef100_A0A2A1K7U1, UniRef:UniRef50_Q2FZN5, UniRef:UniRef90_A0A2A1K7U1 contig_1 cds 1711661 1713082 - GCA012955505_01999 ushA 5'-Nucleotidase C-terminal domain-containing protein COG:COG0737, COG:FV, SO:0001217, UniRef:UniRef50_A0A380G340, UniRef:UniRef90_Q4L532 contig_1 cds 1713196 1714554 - GCA012955505_02000 trkG Ktr system potassium uptake protein D COG:COG0168, COG:P, RefSeq:WP_011276205.1, SO:0001217, UniParc:UPI000054BCF1, UniRef:UniRef100_A0A2A1KAM4, UniRef:UniRef50_O31658, UniRef:UniRef90_A0A2A1KAM4 contig_1 cds 1714573 1715706 - GCA012955505_02001 Protease SO:0001217, UniRef:UniRef50_A0A380E1V3 contig_1 cds 1715884 1716378 - GCA012955505_02002 (pseudo) hypothetical protein SO:0001217, UniRef:UniRef50_UPI0034DCEFD3, UniRef:UniRef90_UPI001FD64559 contig_1 cds 1716619 1717416 - GCA012955505_02003 terC TerC family protein COG:COG0861, COG:P, RefSeq:WP_011276207.1, SO:0001217, UniParc:UPI000054BCF3, UniRef:UniRef100_A0A2A1K7D1, UniRef:UniRef50_O34997, UniRef:UniRef90_A0A2A1K7D1 contig_1 cds 1717715 1719277 - GCA012955505_02004 prfC peptide chain release factor 3 COG:COG4108, COG:J, GO:0003924, GO:0005525, GO:0005829, GO:0006415, GO:0006449, GO:0016149, GO:0016150, KEGG:K02837, RefSeq:WP_011276209.1, SO:0001217, UniParc:UPI000054BCF5, UniRef:UniRef100_Q4L527, UniRef:UniRef50_Q8Y8C0, UniRef:UniRef90_Q2FZP4 contig_1 cds 1719278 1719532 - GCA012955505_02005 YueH-like family protein RefSeq:WP_011276210.1, SO:0001217, UniParc:UPI000054BCF6, UniRef:UniRef100_A0A2A1K9C1, UniRef:UniRef50_A0A2A1K9C1, UniRef:UniRef90_A0A2A1K9C1 contig_1 cds 1719522 1720991 - GCA012955505_02006 murE UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase COG:COG0769, COG:M, EC:6.3.2.7, GO:0000287, GO:0005524, GO:0005737, GO:0008360, GO:0009252, GO:0047482, GO:0051301, GO:0071555, KEGG:K01928, SO:0001217, UniRef:UniRef50_Q2FZP6, UniRef:UniRef90_Q4L525 contig_1 cds 1721184 1722359 + GCA012955505_02007 ugtP diglucosyl diacylglycerol synthase COG:COG0707, COG:M, EC:2.4.1.315, GO:0005886, GO:0009246, GO:0009247, GO:0047228, GO:0070395, KEGG:K03429, RefSeq:WP_016931309.1, SO:0001217, UniParc:UPI0002E8BF51, UniRef:UniRef100_A0A2A1K5G9, UniRef:UniRef50_Q2FZP7, UniRef:UniRef90_Q4L524 contig_1 cds 1722337 1723317 + GCA012955505_02008 ltaA Proton-coupled antiporter flippase LtaA SO:0001217, UniRef:UniRef50_A0A380EHZ8 contig_1 cds 1723301 1723516 + GCA012955505_02009 (pseudo) MFS transporter SO:0001217, UniRef:UniRef50_UPI0030F370F4, UniRef:UniRef90_UPI0030F370F4 contig_1 cds 1723575 1724084 - GCA012955505_02010 thpR Putative phosphoesterase SH1944 COG:COG1514, COG:J, EC:3.1.-.-, GO:0016788, RefSeq:WP_011276214.1, SO:0001217, UniParc:UPI000054BCFA, UniRef:UniRef100_Q4L522, UniRef:UniRef50_Q2FZP9, UniRef:UniRef90_Q4L522 contig_1 cds 1724210 1724962 - GCA012955505_02011 fes Acetylesterase COG:COG2382, COG:P, SO:0001217, UniRef:UniRef50_Q2FZQ0, UniRef:UniRef90_Q4L521 contig_1 cds 1725079 1726164 + GCA012955505_02012 perM AI-2E family transporter COG:COG0628, COG:R, RefSeq:WP_011276216.1, SO:0001217, UniParc:UPI000054BCFC, UniRef:UniRef100_A0A2A1KAN4, UniRef:UniRef50_Q2FZQ2, UniRef:UniRef90_A0AAE5JM71 contig_1 cds 1726290 1727060 - GCA012955505_02013 fabI enoyl-ACP reductase FabI COG:COG0623, COG:I, EC:1.3.1.-, EC:1.3.1.39, GO:0004318, GO:0006633, GO:0030497, GO:0042802, GO:0050661, GO:0141148, RefSeq:WP_011276217.1, SO:0001217, UniParc:UPI000054BCFD, UniRef:UniRef100_A0A7T8UWU9, UniRef:UniRef50_Q2FZQ3, UniRef:UniRef90_Q2FZQ3 contig_1 cds 1727479 1728276 - GCA012955505_02014 trkA (pseudo) Sodium:proton antiporter COG:COG0569, COG:PT, SO:0001217, UniRef:UniRef50_O31615, UniRef:UniRef90_A0A2K0A959 contig_1 cds 1728338 1729249 - GCA012955505_02015 Na+/H+ antiporter-like protein SO:0001217, UniRef:UniRef50_A0A380E230 contig_1 cds 1729259 1729642 - GCA012955505_02016 magnesium transporter SO:0001217, UniRef:UniRef50_UPI0030BDD611, UniRef:UniRef90_UPI0030BDD611 contig_1 cds 1729930 1730265 - GCA012955505_02017 (pseudo) Divalent cation transport protein SO:0001217, UniRef:UniRef50_A0A7Z1SAL3, UniRef:UniRef90_A0A380FEI0 contig_1 cds 1730501 1731310 - GCA012955505_02018 nadK NAD kinase COG:COG0061, COG:H, EC:2.7.1.23, GO:0003951, GO:0005524, GO:0005737, GO:0006741, GO:0019674, GO:0046872, GO:0051287, KEGG:K00858, RefSeq:WP_011276221.1, SO:0001217, UniParc:UPI000054BD01, UniRef:UniRef100_Q4L515, UniRef:UniRef50_Q8Y8D7, UniRef:UniRef90_Q2G1Z9 contig_1 cds 1731323 1731952 - GCA012955505_02019 yjbM GTP pyrophosphokinase COG:COG2357, COG:FT, RefSeq:WP_011276222.1, SO:0001217, UniParc:UPI000054BD02, UniRef:UniRef100_A0A2A1K4A8, UniRef:UniRef50_O31611, UniRef:UniRef90_A0A380G3W5 contig_1 cds 1731969 1732316 - GCA012955505_02020 UPF0738 protein SH1953 RefSeq:WP_011276223.1, SO:0001217, UniParc:UPI000054BD03, UniRef:UniRef100_Q4L513, UniRef:UniRef50_Q2G200, UniRef:UniRef90_Q4L513 contig_1 cds 1732571 1733059 + GCA012955505_02021 CYTH domain-containing protein SO:0001217, UniRef:UniRef50_Q2G201 contig_1 cds 1733147 1733512 + GCA012955505_02022 yjbI truncated hemoglobin YjbI BlastRules:WP_000214067, BlastRules:WP_019167281, COG:COG2346, COG:P, RefSeq:WP_011276225.1, SO:0001217, UniParc:UPI000054BD05, UniRef:UniRef100_A0A2A1K9S9, UniRef:UniRef50_Q2G202, UniRef:UniRef90_A0A380G0M6 contig_1 cds 1733536 1734333 + GCA012955505_02023 yjbH protease adaptor protein YjbH BlastRules:WP_000896697, BlastRules:WP_014614367, COG:COG2761, COG:O, GO:0005737, RefSeq:WP_011276226.1, SO:0001217, UniParc:UPI000054BD06, UniRef:UniRef100_Q4L510, UniRef:UniRef50_Q2G203, UniRef:UniRef90_Q4L510 contig_1 ncRNA 1734544 1734641 - GCA012955505_02024 rsaE RNA Staph. aureus E (RoxS) RFAM:RF01820, SO:0000655 contig_1 cds 1734741 1736549 - GCA012955505_02025 pepF oligoendopeptidase F COG:COG1164, COG:E, EC:3.4.24.-, GO:0004222, GO:0006508, KEGG:K08602, RefSeq:WP_011276227.1, SO:0001217, UniParc:UPI000054BD07, UniRef:UniRef100_A0A2A1K4B1, UniRef:UniRef50_O31605, UniRef:UniRef90_A0A2A1K4B1 contig_1 cds 1736614 1737573 - GCA012955505_02026 coiA Transcription factor COG:COG4469, COG:R, KEGG:K06198, RefSeq:WP_049394681.1, SO:0001217, UniParc:UPI00066BD16D, UniRef:UniRef100_UPI00066BD16D, UniRef:UniRef50_A0A2A1K9P1, UniRef:UniRef90_A0A2A1K9P1 contig_1 cds 1737674 1738396 - GCA012955505_02027 mecA adaptor protein MecA COG:COG4862, COG:KTN, GO:0030674, KEGG:K16511, RefSeq:WP_011276229.1, SO:0001217, UniParc:UPI000054BD09, UniRef:UniRef100_Q4L506, UniRef:UniRef50_P60184, UniRef:UniRef90_Q4L506 contig_1 cds 1738595 1738990 - GCA012955505_02028 spxA transcriptional regulator SpxA COG:COG1393, COG:P, GO:0005737, GO:0045892, KEGG:K16509, RefSeq:WP_011276230.1, SO:0001217, UniParc:UPI000054BD0A, UniRef:UniRef100_Q4L505, UniRef:UniRef50_O31602, UniRef:UniRef90_Q2G1U6 contig_1 cds 1739279 1740268 + GCA012955505_02029 trpS tryptophan--tRNA ligase COG:COG0180, COG:J, EC:6.1.1.2, GO:0000166, GO:0004830, GO:0005524, GO:0006436, RefSeq:WP_016931316.1, SO:0001217, UniParc:UPI0002F03259, UniRef:UniRef100_UPI0002F03259, UniRef:UniRef50_P21656, UniRef:UniRef90_A0A2K0A949 contig_1 ncRNA 1740314 1740548 - GCA012955505_02030 tsr24 S. aureus tsr24 small RNA RFAM:RF02577, SO:0000655 contig_1 cds 1740527 1740814 + GCA012955505_02031 transposase SO:0001217, UniRef:UniRef50_UPI0028DC6D3A, UniRef:UniRef90_UPI0028DC6D3A contig_1 cds 1740837 1741844 - GCA012955505_02032 oppA Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein oppA SO:0001217, UniRef:UniRef50_A0A7Z7QYB4 contig_1 cds 1741884 1742477 - GCA012955505_02033 peptide ABC transporter substrate-binding protein SO:0001217, UniRef:UniRef50_A0A4R6BS17, UniRef:UniRef90_UPI001C4069FC contig_1 cds 1742505 1743449 - GCA012955505_02034 oppF Oligopeptide transport system ATP-binding protein OppF COG:COG0444, COG:EP, SO:0001217, UniRef:UniRef50_P24137, UniRef:UniRef90_A0A380G2Y5 contig_1 cds 1743442 1744302 - GCA012955505_02035 nikD Nickel import system ATP-binding protein NikD SO:0001217, UniRef:UniRef50_A0A945DID1 contig_1 cds 1744499 1745368 - GCA012955505_02036 oppC Oligopeptide transport system permease protein OppC SO:0001217, UniRef:UniRef50_B9DIT6 contig_1 cds 1745368 1746294 - GCA012955505_02037 opp3b oligopeptide ABC transporter permease COG:COG0601, COG:EP, GO:0043190, GO:0140359, RefSeq:WP_136719856.1, SO:0001217, UniParc:UPI0010AB608A, UniRef:UniRef100_UPI0010AB608A, UniRef:UniRef50_Q2FZR7, UniRef:UniRef90_Q2FZR7 contig_1 cds 1746374 1746751 + GCA012955505_02038 DUF3899 domain-containing protein RefSeq:WP_033079768.1, SO:0001217, UniParc:UPI00044852AB, UniRef:UniRef100_A0A2A1K8E2, UniRef:UniRef50_A0A2A1K8E2, UniRef:UniRef90_A0A2A1K8E2 contig_1 cds 1746824 1748068 - GCA012955505_02039 fabF beta-ketoacyl-ACP synthase II COG:COG0304, COG:IQ, EC:2.3.1.179, GO:0004315, GO:0006633, RefSeq:WP_011276239.1, SO:0001217, UniParc:UPI000054BD13, UniRef:UniRef100_A0A2A1K7Q8, UniRef:UniRef50_O34340, UniRef:UniRef90_A0A2A1K7Q8 contig_1 cds 1748082 1748801 - GCA012955505_02040 beta-ketoacyl-ACP synthase 3 SO:0001217, UniRef:UniRef50_UPI000BA6A078 contig_1 cds 1749171 1749365 + GCA012955505_02041 DUF2929 domain-containing protein RefSeq:WP_011276241.1, SO:0001217, UniParc:UPI000054BD15, UniRef:UniRef100_A0A2A1K9A4, UniRef:UniRef50_Q2FZS1, UniRef:UniRef90_A0A2A1K9A4 contig_1 cds 1749351 1750691 - GCA012955505_02042 ATP-dependent Clp protease ATP-binding subunit SO:0001217, UniRef:UniRef50_A0A955INM1, UniRef:UniRef90_UPI0018A6C7D7 contig_1 cds 1750831 1751862 - GCA012955505_02043 AAA family ATPase SO:0001217, UniRef:UniRef50_A0A7C9CCC7, UniRef:UniRef90_UPI002A822236 contig_1 cds 1752172 1753998 - GCA012955505_02044 oafA Acetyltransferase COG:COG1835, COG:M, RefSeq:WP_145463274.1, SO:0001217, UniParc:UPI00119D9BA0, UniRef:UniRef100_UPI00119D9BA0, UniRef:UniRef50_Q2FV54, UniRef:UniRef90_A0A7Z1N2S9 contig_1 cds 1754349 1754657 - GCA012955505_02045 sufT Fe-S protein maturation auxiliary factor SufT COG:COG2151, COG:O, RefSeq:WP_033079770.1, SO:0001217, UniParc:UPI00051A5502, UniRef:UniRef100_A0A2A1K7Y6, UniRef:UniRef50_A0A0H2XI17, UniRef:UniRef90_A0A0H2XI17 contig_1 cds 1754858 1755142 + GCA012955505_02046 HAD-IIB family hydrolase SO:0001217, UniRef:UniRef50_UPI0037D3BD07 contig_1 cds 1755139 1755684 + GCA012955505_02047 HAD hydrolase family protein SO:0001217, UniRef:UniRef50_UPI000208789E contig_1 cds 1755836 1757047 + GCA012955505_02048 cdr CoA-disulfide reductase COG:COG0446, COG:I, EC:1.8.1.14, GO:0003756, GO:0016491, GO:0045454, GO:0050451, GO:0050660, GO:0050661, KEGG:K08255, SO:0001217, UniRef:UniRef50_O52582, UniRef:UniRef90_Q4L4Y7 contig_1 cds 1757121 1757522 - GCA012955505_02049 UPF0344 protein SH1980 GO:0005886, RefSeq:WP_011276247.1, SO:0001217, UniParc:UPI000054BD1B, UniRef:UniRef100_Q4L4Y6, UniRef:UniRef50_Q2FZT3, UniRef:UniRef90_Q4L4Y6 contig_1 cds 1757945 1758850 - GCA012955505_02050 ycgM putative protein SH1982 COG:COG0179, COG:Q, GO:0018773, GO:0046872, RefSeq:WP_016931170.1, SO:0001217, UniParc:UPI0002ECA27C, UniRef:UniRef100_A0A7Z1N208, UniRef:UniRef50_Q2FZT4, UniRef:UniRef90_Q4L4Y4 contig_1 cds 1759030 1762455 - GCA012955505_02051 ATP-dependent helicase/nuclease subunit A SO:0001217, UniRef:UniRef50_Q4L4Y3 contig_1 cds 1762439 1765924 - GCA012955505_02052 addB helicase-exonuclease AddAB subunit AddB COG:COG3857, COG:L, EC:3.1.-.-, EC:3.6.4.12, GO:0000724, GO:0003690, GO:0004527, GO:0005524, GO:0008409, GO:0009378, GO:0036121, GO:0046872, GO:0051539, GO:0061749, GO:1990518, SO:0001217, UniRef:UniRef50_Q2FZT6, UniRef:UniRef90_Q4L4Y2 contig_1 cds 1766087 1766659 - GCA012955505_02053 lepB signal peptidase I COG:COG0681, COG:U, EC:3.4.21.89, GO:0004252, GO:0006465, GO:0009306, GO:0016020, KEGG:K03100, RefSeq:WP_011276252.1, SO:0001217, UniParc:UPI000054BD20, UniRef:UniRef100_A0A2A1K9A2, UniRef:UniRef50_Q5HHB9, UniRef:UniRef90_A0A2A1K9A2 contig_1 cds 1766674 1767198 - GCA012955505_02054 lepB signal peptidase I COG:COG0681, COG:U, EC:3.4.21.89, GO:0004252, GO:0006465, GO:0009306, GO:0016020, RefSeq:WP_011276253.1, SO:0001217, UniParc:UPI000054BD21, UniRef:UniRef100_A0A2A1K9W4, UniRef:UniRef50_P0A063, UniRef:UniRef90_A0A7Z1SC01 contig_1 cds 1767203 1767775 - GCA012955505_02055 tVP38 TVP38/TMEM64 family membrane protein COG:COG0398, COG:S, RefSeq:WP_016931167.1, SO:0001217, UniParc:UPI00031C10F5, UniRef:UniRef100_A0A2A1KB84, UniRef:UniRef50_Q2FZT9, UniRef:UniRef90_Q4L4X9 contig_1 cds 1768005 1769336 - GCA012955505_02056 pgi glucose-6-phosphate isomerase COG:COG0166, COG:G, EC:5.3.1.9, GO:0004347, GO:0005829, GO:0006094, GO:0006096, GO:0048029, GO:0051156, GO:0097367, RefSeq:WP_011276255.1, SO:0001217, UniParc:UPI000054BD23, UniRef:UniRef100_Q4L4X8, UniRef:UniRef50_P13376, UniRef:UniRef90_Q2FZU0 contig_1 cds 1769598 1770800 + GCA012955505_02057 argG argininosuccinate synthase COG:COG0137, COG:E, EC:6.3.4.5, GO:0000050, GO:0000053, GO:0004055, GO:0005524, GO:0005737, GO:0006526, KEGG:K01940, RefSeq:WP_033079774.1, SO:0001217, UniParc:UPI0004A8E66B, UniRef:UniRef100_A0A7T8UWK1, UniRef:UniRef50_A0RJM4, UniRef:UniRef90_Q2FZU1 contig_1 cds 1770793 1772175 + GCA012955505_02058 argH argininosuccinate lyase COG:COG0165, COG:E, EC:4.3.2.1, GO:0004056, GO:0005829, GO:0006526, GO:0042450, KEGG:K01755, RefSeq:WP_011276257.1, SO:0001217, UniParc:UPI000054BD25, UniRef:UniRef100_Q4L4X6, UniRef:UniRef50_Q5M2K3, UniRef:UniRef90_Q4L4X6 contig_1 cds 1772363 1773325 + GCA012955505_02059 ugpQ Glycerophosphodiester phosphodiesterase COG:COG0584, COG:I, EC:3.1.4.46, KEGG:K01126, RefSeq:WP_011276258.1, SO:0001217, UniParc:UPI000054BD26, UniRef:UniRef100_A0A7Z1N1T4, UniRef:UniRef50_A0A380GA35, UniRef:UniRef90_A0A7Z1N1T4 contig_1 cds 1773477 1774721 - GCA012955505_02060 gluD NAD-specific glutamate dehydrogenase COG:COG0334, COG:E, EC:1.4.1.2, GO:0004352, GO:0006520, GO:0006538, RefSeq:WP_037570617.1, SO:0001217, UniParc:UPI0002DFF8D3, UniRef:UniRef100_Q4L4X4, UniRef:UniRef50_P39633, UniRef:UniRef90_Q5HHC7 contig_1 cds 1774829 1776019 - GCA012955505_02061 rocD2 ornithine--oxo-acid transaminase COG:COG4992, COG:E, EC:2.6.1.13, GO:0004587, GO:0005737, GO:0030170, GO:0042802, GO:0055129, KEGG:K00819, RefSeq:WP_037570620.1, SO:0001217, UniParc:UPI0004A891B4, UniRef:UniRef100_A0A2A1K7N6, UniRef:UniRef50_P38021, UniRef:UniRef90_Q49W96 contig_1 cds 1776431 1777558 - GCA012955505_02062 fadH NADH-dependent flavin oxidoreductase COG:C, COG:COG1902, RefSeq:WP_011276261.1, SO:0001217, UniParc:UPI000054BD29, UniRef:UniRef100_A0A2A1K6I4, UniRef:UniRef50_S2YL03, UniRef:UniRef90_A0A2A1K6I4 contig_1 cds 1777720 1777986 + GCA012955505_02063 hypothetical protein contig_1 cds 1777924 1778196 - GCA012955505_02064 ygs S1 domain-containing post-transcriptional regulator Ygs SO:0001217, UniRef:UniRef50_A0A380DN91, UniRef:UniRef90_UPI0030BB5E90 contig_1 cds 1778443 1779039 - GCA012955505_02065 ppiB Putative peptidyl-prolyl cis-trans isomerase COG:COG0652, COG:O, EC:5.2.1.8, GO:0140839, GO:0140840, RefSeq:WP_011276264.1, SO:0001217, UniParc:UPI000054BD2C, UniRef:UniRef100_Q4L4W9, UniRef:UniRef50_Q49W93, UniRef:UniRef90_Q4L4W9 contig_1 cds 1779108 1779488 + GCA012955505_02066 Kinase KEGG:K06347, RefSeq:WP_011276265.1, SO:0001217, UniParc:UPI000054BD2D, UniRef:UniRef100_A0A2A1K8Q6, UniRef:UniRef50_A0A0M2NU22, UniRef:UniRef90_A0A2A1K8Q6 contig_1 cds 1779622 1782033 + GCA012955505_02067 mnhA1 Na+/H+ antiporter subunit A COG:COG2111, COG:P, GO:0005886, GO:0006814, GO:0015297, GO:0051139, GO:0098662, GO:1902600, RefSeq:WP_033079934.1, SO:0001217, UniParc:UPI0004A8CA12, UniRef:UniRef100_A0A2A1K825, UniRef:UniRef50_Q9K2S2, UniRef:UniRef90_Q4L4W7 contig_1 cds 1782014 1782442 + GCA012955505_02068 mnhB1 Na(+)/H(+) antiporter subunit B1 COG:COG2111, COG:P, GO:0005886, GO:0006814, GO:0008324, GO:0015297, GO:1902600, RefSeq:WP_016931159.1, SO:0001217, UniParc:UPI0002E53ECA, UniRef:UniRef100_A0A2A1K6L0, UniRef:UniRef50_Q5HQL1, UniRef:UniRef90_Q4L4W6 contig_1 cds 1782442 1782783 + GCA012955505_02069 mnhC1 Na+/H+ antiporter Mnh1 subunit C BlastRules:WP_000402803, COG:COG1006, COG:P, GO:0005886, GO:0006812, GO:0006814, GO:0008324, GO:0015297, GO:1902600, RefSeq:WP_011276268.1, SO:0001217, UniParc:UPI000054BD30, UniRef:UniRef100_Q4L4W5, UniRef:UniRef50_O05260, UniRef:UniRef90_Q4L4W5 contig_1 cds 1782776 1784275 + GCA012955505_02070 mnhD Na+/H+ antiporter subunit D COG:COG0651, COG:CP, GO:0005886, GO:0006814, GO:0008137, GO:0015297, GO:0042773, RefSeq:WP_016931158.1, SO:0001217, UniParc:UPI0002DDB869, UniRef:UniRef100_A0A2A1KA90, UniRef:UniRef50_Q2G2H7, UniRef:UniRef90_Q4L4W4 contig_1 cds 1784275 1784649 + GCA012955505_02071 Na+/H+ antiporter subunit E SO:0001217, UniRef:UniRef50_UPI0015948C57 contig_1 cds 1784729 1785019 + GCA012955505_02072 mnhF1 Na(+)/H(+) antiporter subunit F1 COG:COG2212, COG:P, GO:0005886, GO:0015385, RefSeq:WP_011276271.1, SO:0001217, UniParc:UPI000054BD33, UniRef:UniRef100_Q4L4W2, UniRef:UniRef50_Q2G2H6, UniRef:UniRef90_Q4L4W2 contig_1 cds 1784997 1785353 + GCA012955505_02073 mnhG1 Na+/H+ antiporter subunit G1 COG:COG1320, COG:P, GO:0005886, GO:0015385, RefSeq:WP_011276272.1, SO:0001217, UniParc:UPI000054BD34, UniRef:UniRef100_Q4L4W1, UniRef:UniRef50_Q2G2H9, UniRef:UniRef90_Q4L4W1 contig_1 cds 1785418 1786626 + GCA012955505_02074 ydhS Pyridine nucleotide-disulfide oxidoreductase COG:COG4529, COG:R, SO:0001217, UniRef:UniRef50_A0A418IDL1, UniRef:UniRef90_Q4L4W0 contig_1 cds 1786825 1787202 - GCA012955505_02075 paaI Thioesterase domain-containing protein COG:COG2050, COG:Q, RefSeq:WP_037559148.1, SO:0001217, UniParc:UPI000447AB10, UniRef:UniRef100_A0A2A1K8W8, UniRef:UniRef50_A0A090LQF4, UniRef:UniRef90_Q4L4V9 contig_1 cds 1787225 1787962 - GCA012955505_02076 Na+/H+ antiporter NhaC-like C-terminal domain-containing protein SO:0001217, UniRef:UniRef50_A0A455UB00 contig_1 cds 1787979 1788512 - GCA012955505_02077 yuiF (pseudo) Sodium:proton antiporter COG:COG2056, COG:E, KEGG:K07084, SO:0001217, UniRef:UniRef50_Q2FZV5, UniRef:UniRef90_Q4L4V8 contig_1 cds 1788650 1789849 - GCA012955505_02078 pepB Cytosol aminopeptidase COG:COG0260, COG:E, SO:0001217, UniRef:UniRef50_B9DIX2, UniRef:UniRef90_Q4L4V7 contig_1 cds 1789947 1790084 - GCA012955505_02079 hypothetical protein contig_1 cds 1790290 1790688 - GCA012955505_02080 hypothetical protein contig_1 cds 1790731 1791402 - GCA012955505_02081 NAD(P)/FAD-dependent oxidoreductase SO:0001217, UniRef:UniRef50_UPI00159F59B8 contig_1 cds 1791768 1792127 - GCA012955505_02082 iscA FeS cluster biogenesis domain-containing protein COG:COG0316, COG:O, RefSeq:WP_145463272.1, SO:0001217, UniParc:UPI00119F8125, UniRef:UniRef100_UPI00119F8125, UniRef:UniRef50_Q49W79, UniRef:UniRef90_A0A1S1GST6 contig_1 cds 1792140 1792385 - GCA012955505_02083 yuzB UPF0349 protein SH2012 COG:COG4844, COG:S, RefSeq:WP_048667953.1, SO:0001217, UniParc:UPI0006603B97, UniRef:UniRef100_A0A2A1KA80, UniRef:UniRef50_A4ISE9, UniRef:UniRef90_Q4L4V4 contig_1 cds 1792722 1793786 + GCA012955505_02084 ndh Type II NADH:quinone oxidoreductase COG:C, COG:COG1252, RefSeq:WP_048667954.1, SO:0001217, UniParc:UPI00065FC07F, UniRef:UniRef100_A0A2A1KBK2, UniRef:UniRef50_A0A239ZU84, UniRef:UniRef90_Q4L4V3 contig_1 cds 1793870 1794190 - GCA012955505_02085 yuzD DUF1462 domain-containing protein COG:COG4837, COG:O, RefSeq:WP_011276281.1, SO:0001217, UniParc:UPI000054BD3D, UniRef:UniRef100_A0A7Z1SCD1, UniRef:UniRef50_A0A0H3JTK4, UniRef:UniRef90_A0A7Z1SCD1 contig_1 cds 1794294 1794536 + GCA012955505_02086 nifU NIF system FeS cluster assembly NifU C-terminal domain-containing protein COG:COG0694, COG:O, RefSeq:WP_002433501.1, SO:0001217, UniParc:UPI000054BD3E, UniRef:UniRef100_A0A380G2L4, UniRef:UniRef50_I0JQ31, UniRef:UniRef90_Q2FZW2 contig_1 cds 1794675 1794959 - GCA012955505_02087 hypothetical protein contig_1 cds 1795009 1795545 - GCA012955505_02088 dltD D-alanyl-lipoteichoic acid biosynthesis protein DltD SO:0001217, UniRef:UniRef50_UPI00024E4E89 contig_1 cds 1795542 1795775 - GCA012955505_02089 dltC D-alanine--poly(phosphoribitol) ligase subunit 2 EC:6.1.1.13, GO:0019350, GO:0036370, SO:0001217, UniRef:UniRef50_P39579, UniRef:UniRef90_UPI0021CFC193 contig_1 cds 1795791 1796069 - GCA012955505_02090 (pseudo) MBOAT family O-acyltransferase KEGG:K03739, SO:0001217, UniRef:UniRef50_A0A4V5SGG2, UniRef:UniRef90_UPI000FED1C1F contig_1 cds 1796009 1796989 - GCA012955505_02091 dltB PG:teichoic acid D-alanyltransferase DltB SO:0001217, UniRef:UniRef50_UPI00065B9013 contig_1 cds 1796986 1798443 - GCA012955505_02092 dltA D-alanine--poly(phosphoribitol) ligase subunit DltA COG:COG1020, COG:Q, EC:6.1.1.13, EC:6.2.1.54, GO:0005524, GO:0005737, GO:0019350, GO:0047473, GO:0070395, RefSeq:WP_011276287.1, SO:0001217, UniParc:UPI000054BD44, UniRef:UniRef100_Q4L4U5, UniRef:UniRef50_P68876, UniRef:UniRef90_Q4L4U5 contig_1 cds 1798954 1799397 - GCA012955505_02093 NAD(P)-dependent oxidoreductase SO:0001217, UniRef:UniRef50_UPI0028CB5E67 contig_1 cds 1799471 1799560 - GCA012955505_02094 hypothetical protein contig_1 cds 1799569 1800591 - GCA012955505_02095 hypothetical protein PFAM:PF00702.32, PFAM:PF13242.12, PFAM:PF13344.12 contig_1 cds 1800598 1800981 - GCA012955505_02096 DUF86 domain-containing protein SO:0001217, UniRef:UniRef50_A0A077UTM6 contig_1 cds 1801084 1801350 + GCA012955505_02097 DUF3055 domain-containing protein RefSeq:WP_037548938.1, SO:0001217, UniParc:UPI00044C16FE, UniRef:UniRef100_A0A640N8K4, UniRef:UniRef50_Q2FZX2, UniRef:UniRef90_Q5HQN5 contig_1 cds 1801423 1801653 - GCA012955505_02098 YutD-like domain-containing protein SO:0001217, UniRef:UniRef50_UPI000E69C645 contig_1 cds 1801625 1801783 - GCA012955505_02099 hypothetical protein contig_1 cds 1801892 1802812 - GCA012955505_02100 lipA lipoyl synthase COG:COG0320, COG:H, EC:2.8.1.8, GO:0005737, GO:0009107, GO:0016992, GO:0046872, GO:0051539, GO:1904047, KEGG:K03644, RefSeq:WP_029376689.1, SO:0001217, UniParc:UPI00016630F8, UniRef:UniRef100_Q4L4T8, UniRef:UniRef50_Q2FZX4, UniRef:UniRef90_Q2FZX4 contig_1 cds 1802901 1803962 - GCA012955505_02101 UDP-sugar hydrolase 5-nucleotidase SO:0001217, UniRef:UniRef50_A0A2I7Y753 contig_1 cds 1803984 1804811 - GCA012955505_02102 tauE putative membrane transporter protein COG:COG0730, COG:P, RefSeq:WP_011276296.1, SO:0001217, UniParc:UPI000054BD4D, UniRef:UniRef100_A0A2A1K8V2, UniRef:UniRef50_A0A7U7PY32, UniRef:UniRef90_A0A2A1K8V2 contig_1 cds 1804825 1805673 - GCA012955505_02103 yecE DUF72 domain-containing protein COG:COG1801, COG:R, RefSeq:WP_011276297.1, SO:0001217, UniParc:UPI000054BD4E, UniRef:UniRef100_A0A640N8K2, UniRef:UniRef50_A0A0A8JCS6, UniRef:UniRef90_A0A2K0A9A7 contig_1 cds 1805798 1806871 - GCA012955505_02104 yrpB putative nitronate monooxygenase COG:COG2070, COG:R, EC:1.13.12.-, GO:0000166, GO:0009636, GO:0018580, RefSeq:WP_011276298.1, SO:0001217, UniParc:UPI000054BD4F, UniRef:UniRef100_Q4L4T4, UniRef:UniRef50_Q2FZX9, UniRef:UniRef90_Q4L4T4 contig_1 cds 1807135 1807539 - GCA012955505_02105 hypothetical protein RefSeq:WP_257643537.1, SO:0001217, UniParc:UPI00214D2DEC, UniRef:UniRef100_UPI00214D2DEC, UniRef:UniRef50_UPI00214D2DEC, UniRef:UniRef90_UPI00214D2DEC contig_1 cds 1807765 1809162 - GCA012955505_02106 sufB Fe-S cluster assembly protein SufB COG:COG0719, COG:O, GO:0016226, RefSeq:WP_011276300.1, SO:0001217, UniParc:UPI000054BD51, UniRef:UniRef100_Q4L4T1, UniRef:UniRef50_O32162, UniRef:UniRef90_Q2FZY3 contig_1 cds 1809342 1809803 - GCA012955505_02107 sufU Fe-S cluster assembly sulfur transfer protein SufU COG:COG0822, COG:O, GO:0005198, GO:0016226, RefSeq:WP_011276301.1, SO:0001217, UniParc:UPI000054BD52, UniRef:UniRef100_A0A640N8L3, UniRef:UniRef50_O32163, UniRef:UniRef90_Q2FZY4 contig_1 cds 1809793 1811034 - GCA012955505_02108 csdA putative cysteine desulfurase COG:COG0520, COG:E, EC:2.8.1.7, EC:4.4.1.16, KEGG:K11717, SO:0001217, UniParc:UPI000054BD53, UniRef:UniRef100_A0A2A1KBI3, UniRef:UniRef50_O32164, UniRef:UniRef90_A0A380G3E9 contig_1 cds 1811084 1812391 - GCA012955505_02109 sufD Fe-S cluster assembly protein SufD COG:COG0719, COG:O, GO:0016226, KEGG:K09015, RefSeq:WP_011276303.1, SO:0001217, UniParc:UPI000054BD54, UniRef:UniRef100_A0A2A1K876, UniRef:UniRef50_O32165, UniRef:UniRef90_A0A2A1K876 contig_1 cds 1812569 1813330 - GCA012955505_02110 sufC Fe-S cluster assembly ATPase SufC COG:COG0396, COG:O, GO:0005524, GO:0016226, RefSeq:WP_011276304.1, SO:0001217, UniParc:UPI000054BD55, UniRef:UniRef100_A0A640N8N2, UniRef:UniRef50_A0A1G4NXF9, UniRef:UniRef90_A0A166RBF7 contig_1 cds 1813415 1814266 + GCA012955505_02111 undP DUF368 domain-containing protein COG:COG2035, COG:M, KEGG:K08974, RefSeq:WP_011276305.1, SO:0001217, UniParc:UPI000054BD56, UniRef:UniRef100_A0A2A1KBE9, UniRef:UniRef50_Q2FZY8, UniRef:UniRef90_A0A2A1KBE9 contig_1 cds 1814354 1814584 - GCA012955505_02112 Transposase DDE domain-containing protein SO:0001217, UniRef:UniRef50_A0A9Q5JM32 contig_1 ncRNA 1814607 1814832 + GCA012955505_02113 tsr24 S. aureus tsr24 small RNA RFAM:RF02577, SO:0000655 contig_1 cds 1814907 1815101 - GCA012955505_02114 yjbJ UPF0337 protein SH2043 COG:COG3237, COG:S, RefSeq:WP_011276307.1, SO:0001217, UniParc:UPI000054BD58, UniRef:UniRef100_Q4L4S3, UniRef:UniRef50_Q2FZY9, UniRef:UniRef90_Q4L4S3 contig_1 cds 1815249 1815389 + GCA012955505_02115 Sporulation protein Cse60 SO:0001217, UniRef:UniRef50_A0A380GQZ7, UniRef:UniRef90_Q4L4S2 contig_1 cds 1815437 1816081 - GCA012955505_02116 Lipoprotein SO:0001217, UniRef:UniRef50_A0A380G8D6 contig_1 cds 1816102 1816797 - GCA012955505_02117 metP ABC transmembrane type-1 domain-containing protein COG:COG2011, COG:E, RefSeq:WP_011276310.1, SO:0001217, UniParc:UPI000054BD5B, UniRef:UniRef100_A0A2A1K9M2, UniRef:UniRef50_O32168, UniRef:UniRef90_Q2FZZ1 contig_1 cds 1816790 1817815 - GCA012955505_02118 metN Methionine import ATP-binding protein MetN COG:COG1135, COG:E, EC:7.4.2.11, GO:0005524, GO:0005886, GO:0016887, GO:0033232, RefSeq:WP_011276311.1, SO:0001217, UniParc:UPI000054BD5C, UniRef:UniRef100_Q4L4R9, UniRef:UniRef50_Q99VG8, UniRef:UniRef90_Q4L4R9 contig_1 ncRNA-region 1817900 1818005 - SAM riboswitch aptamer (S box leader) RFAM:RF00162, SO:0000140 contig_1 cds 1818063 1818359 - GCA012955505_02119 Thiol reductase thioredoxin RefSeq:WP_011276313.1, SO:0001217, UniParc:UPI000054BD5E, UniRef:UniRef100_A0A640N8R2, UniRef:UniRef50_Q2FZZ3, UniRef:UniRef90_A0A640N8R2 contig_1 cds 1818352 1818738 - GCA012955505_02120 rnmV Topiosmerase COG:COG1658, COG:J, RefSeq:WP_011276314.1, SO:0001217, UniParc:UPI000054BD5F, UniRef:UniRef100_A0A2A1K8Y9, UniRef:UniRef50_A0A1E5LDX5, UniRef:UniRef90_A0A2A1K8Y9 contig_1 cds 1818930 1819310 - GCA012955505_02121 gcvH glycine cleavage system protein GcvH COG:COG0509, COG:E, GO:0005829, GO:0005960, GO:0019464, RefSeq:WP_011276315.1, SO:0001217, UniParc:UPI000054BD60, UniRef:UniRef100_Q4L4R5, UniRef:UniRef50_O32174, UniRef:UniRef90_Q49W45 contig_1 cds 1819921 1820244 + GCA012955505_02122 trxA Thioredoxin family protein COG:COG0526, COG:O, RefSeq:WP_011276317.1, SO:0001217, UniParc:UPI000054BD62, UniRef:UniRef100_A0A640N8S7, UniRef:UniRef50_A0A0U1MGB8, UniRef:UniRef90_A0A640N8S7 contig_1 cds 1820415 1820954 - GCA012955505_02123 nfnB Nitroreductase COG:C, COG:COG0778, RefSeq:WP_011276318.1, SO:0001217, UniParc:UPI000054BD63, UniRef:UniRef100_A0A640N8R4, UniRef:UniRef50_Q2G001, UniRef:UniRef90_A0A640N8R4 contig_1 cds 1821025 1821261 - GCA012955505_02124 type I 3-dehydroquinate dehydratase SO:0001217, UniRef:UniRef50_UPI00284C2E68 contig_1 cds 1821224 1821454 - GCA012955505_02125 hypothetical protein PFAM:PF01487.21 contig_1 cds 1821484 1821747 - GCA012955505_02126 hypothetical protein PFAM:PF01487.21 contig_1 cds 1822457 1822738 + GCA012955505_02127 GNAT family N-acetyltransferase SO:0001217, UniRef:UniRef50_UPI0035175A63, UniRef:UniRef90_UPI00187B0B18 contig_1 cds 1823029 1823574 + GCA012955505_02128 Amino acid transporter SO:0001217, UniRef:UniRef50_Q2G1T0 contig_1 cds 1823864 1824178 - GCA012955505_02129 Phosphoglycerate mutase family protein SO:0001217, UniRef:UniRef50_A0A380E0D2 contig_1 cds 1824395 1824637 + GCA012955505_02130 DUF2750 domain-containing protein RefSeq:WP_011276324.1, SO:0001217, UniParc:UPI000054BD69, UniRef:UniRef100_A0A640N8T0, UniRef:UniRef50_A0A9Q2L4L0, UniRef:UniRef90_A0A5B2YZ51 contig_1 cds 1824629 1824832 - GCA012955505_02131 yozE YozE SAM-like domain-containing protein RefSeq:WP_016931011.1, SO:0001217, UniParc:UPI000305FF70, UniRef:UniRef100_A0A640N8T3, UniRef:UniRef50_Q2G003, UniRef:UniRef90_A0A2A1KCB1 contig_1 cds 1825347 1825604 + GCA012955505_02132 tsaA type II toxin-antitoxin system antitoxin TsaA GO:0110001, RefSeq:WP_016931010.1, SO:0001217, UniParc:UPI00036E18CD, UniRef:UniRef100_A0A640N8V6, UniRef:UniRef50_A0A640N8V6, UniRef:UniRef90_A0A640N8V6 contig_1 cds 1825973 1826404 + GCA012955505_02133 hypothetical protein contig_1 cds 1826848 1827180 + GCA012955505_02134 Lipoprotein RefSeq:WP_341353469.1, SO:0001217, UniParc:UPI003101B274, UniRef:UniRef100_UPI002DBC1829, UniRef:UniRef50_B9DJI6, UniRef:UniRef90_A0A2A1K9F0 contig_1 cds 1827250 1827510 - GCA012955505_02135 rimI (pseudo) N-acetyltransferase domain-containing protein COG:COG0456, COG:J, SO:0001217, UniRef:UniRef50_A0A4U9TR60, UniRef:UniRef90_A0A640N8V0 contig_1 cds 1827497 1827781 - GCA012955505_02136 rimI (pseudo) N-acetyltransferase domain-containing protein COG:COG0456, COG:J, SO:0001217, UniRef:UniRef50_A0A4U9TR60, UniRef:UniRef90_A0A640N8V0 contig_1 cds 1827821 1828396 + GCA012955505_02137 Phage-related replication protein SO:0001217, UniRef:UniRef50_Q5HQS8 contig_1 cds 1828962 1829294 + GCA012955505_02138 hypothetical protein contig_1 cds 1829281 1829739 + GCA012955505_02139 hypothetical protein contig_1 cds 1829703 1829867 + GCA012955505_02140 hypothetical protein contig_1 cds 1830049 1830222 - GCA012955505_02141 hypothetical protein contig_1 cds 1830345 1830689 - GCA012955505_02142 (pseudo) pathogenicity island protein SO:0001217, UniRef:UniRef50_Q4L4M8, UniRef:UniRef90_UPI00273D3881 contig_1 cds 1830726 1830944 - GCA012955505_02143 hypothetical protein contig_1 cds 1831024 1831128 - GCA012955505_02144 hypothetical protein contig_1 cds 1832222 1832692 - GCA012955505_02145 smpB SsrA-binding protein SmpB COG:COG0691, COG:O, GO:0003723, GO:0005829, GO:0070929, KEGG:K03664, RefSeq:WP_011276368.1, SO:0001217, UniParc:UPI000054BD95, UniRef:UniRef100_Q4L4L2, UniRef:UniRef50_A8FHG7, UniRef:UniRef90_Q4L4L2 contig_1 cds 1832769 1833470 - GCA012955505_02146 (pseudo) ribonuclease R family protein EC:3.1.13.1, KEGG:K12573, SO:0001217, UniRef:UniRef50_A0A2X2K1N8, UniRef:UniRef90_UPI001D134F87 contig_1 cds 1833621 1834586 - GCA012955505_02147 3'-to-5' exoribonuclease RNase R SO:0001217, UniRef:UniRef50_A0A2X2K7E5 contig_1 cds 1834629 1835030 - GCA012955505_02148 carboxylesterase SO:0001217, UniRef:UniRef50_A0A0J5GQ07, UniRef:UniRef90_UPI0018A6C277 contig_1 cds 1835069 1835251 - GCA012955505_02149 hypothetical protein contig_1 cds 1835475 1835708 - GCA012955505_02150 secG preprotein translocase subunit SecG COG:COG1314, COG:U, GO:0005886, GO:0009306, GO:0015136, GO:0015450, GO:0015739, GO:0016020, GO:0043952, GO:0065002, RefSeq:WP_011276371.1, SO:0001217, UniParc:UPI000054BD98, UniRef:UniRef100_Q4L4K9, UniRef:UniRef50_Q49W06, UniRef:UniRef90_Q4L4K9 contig_1 cds 1835744 1836001 - GCA012955505_02151 (pseudo) DUF2127 domain-containing protein SO:0001217, UniRef:UniRef50_Q2G027, UniRef:UniRef50_UPI00054CCA7C, UniRef:UniRef90_A0A2A1KDA6 contig_1 cds 1836386 1836811 - GCA012955505_02152 Enolase SO:0001217, UniRef:UniRef50_A0A139PDG5 contig_1 cds 1836856 1837692 - GCA012955505_02153 eno (pseudo) phosphopyruvate hydratase EC:4.2.1.11, GO:0000015, GO:0000287, GO:0004634, GO:0006096, KEGG:K01689, SO:0001217, UniRef:UniRef50_A0A1V6BBF4, UniRef:UniRef90_A0A380EHA8 contig_1 cds 1837848 1838348 - GCA012955505_02154 Metalloenzyme domain-containing protein SO:0001217, UniRef:UniRef50_A0A5S9MH10 contig_1 cds 1838399 1838956 - GCA012955505_02155 gpmI (pseudo) 2,3-bisphosphoglycerate-independent phosphoglycerate mutase EC:5.4.2.12, GO:0006096, GO:0046537, KEGG:K15633, SO:0001217, UniRef:UniRef50_UPI00143101D0, UniRef:UniRef90_UPI000BE0BE4A contig_1 cds 1838931 1839362 - GCA012955505_02156 hypothetical protein PFAM:PF06415.18 contig_1 cds 1839365 1840126 - GCA012955505_02157 tpiA triose-phosphate isomerase COG:COG0149, COG:G, EC:5.3.1.1, GO:0004807, GO:0005829, GO:0006094, GO:0006096, GO:0019563, GO:0046166, KEGG:K01803, RefSeq:WP_011276375.1, SO:0001217, UniParc:UPI000054BD9C, UniRef:UniRef100_Q4L4K5, UniRef:UniRef50_P00943, UniRef:UniRef90_Q4L4K5 contig_1 cds 1840288 1840545 - GCA012955505_02158 phosphoglycerate kinase SO:0001217, UniRef:UniRef50_UPI0030BDDB5A contig_1 cds 1840790 1841188 - GCA012955505_02159 Phosphoglycerate kinase SO:0001217, UniRef:UniRef50_A0A378MFN7 contig_1 cds 1841352 1842359 - GCA012955505_02160 gap type I glyceraldehyde-3-phosphate dehydrogenase COG:COG0057, COG:G, EC:1.2.1.12, GO:0004365, GO:0005737, GO:0006006, GO:0006096, GO:0016620, GO:0050661, GO:0051287, RefSeq:WP_011276377.1, SO:0001217, UniParc:UPI000054BD9E, UniRef:UniRef100_A0A640N904, UniRef:UniRef50_O52631, UniRef:UniRef90_Q5HQV4 contig_1 cds 1842411 1842968 - GCA012955505_02161 deoR (pseudo) Transcriptional regulator COG:COG2390, COG:K, KEGG:K05311, SO:0001217, UniRef:UniRef50_A0A7V7VIG1, UniRef:UniRef90_A0A380G2Y0 contig_1 cds 1843019 1843234 - GCA012955505_02162 hypothetical protein contig_1 cds 1843508 1843669 + GCA012955505_02163 hypothetical protein contig_1 cds 1844621 1844800 + GCA012955505_02164 hypothetical protein RefSeq:WP_016930992.1, SO:0001217, UniParc:UPI0002E822E8, UniRef:UniRef100_A0A640N8Z5, UniRef:UniRef50_A0A2A1KA13, UniRef:UniRef90_A0A2A1KA13 contig_1 ncRNA 1844816 1844947 - GCA012955505_02165 rsaH RNA Staph. aureus H RFAM:RF01821, SO:0000655 contig_1 cds 1845101 1846000 + GCA012955505_02166 yfcH Epimerase family protein SH2119 COG:COG1090, COG:R, KEGG:K07071, RefSeq:WP_016930991.1, SO:0001217, UniParc:UPI0002D7916A, UniRef:UniRef100_A0A640N906, UniRef:UniRef50_Q2G035, UniRef:UniRef90_Q4L4J7 contig_1 cds 1846023 1846202 + GCA012955505_02167 lapA LapA family protein SO:0001217, UniRef:UniRef50_A0A8X8KHM3 contig_1 cds 1846180 1846767 - GCA012955505_02168 clpP ATP-dependent Clp endopeptidase proteolytic subunit ClpP COG:COG0740, COG:O, EC:3.4.21.92, GO:0004176, GO:0004252, GO:0005737, GO:0006508, GO:0006515, GO:0009368, GO:0051117, KEGG:K01358, RefSeq:WP_016930989.1, SO:0001217, UniParc:UPI0002FDA86F, UniRef:UniRef100_A0A640N907, UniRef:UniRef50_P80244, UniRef:UniRef90_Q2G036 contig_1 tRNA 1846961 1847032 + GCA012955505_02169 trnR (pseudo) tRNA-Arg(ccg) SO:0001036 contig_1 cds 1847396 1848340 - GCA012955505_02170 whiA DNA-binding protein WhiA COG:COG1481, COG:K, GO:0003677, GO:0043937, GO:0051301, RefSeq:WP_016930988.1, SO:0001217, UniParc:UPI00031498E0, UniRef:UniRef100_A0A640N926, UniRef:UniRef50_O06975, UniRef:UniRef90_Q2G037 contig_1 cds 1848472 1849458 - GCA012955505_02171 cofD Gluconeogenesis factor COG:COG0391, COG:GH, RefSeq:WP_016930987.1, SO:0001217, UniParc:UPI0002ECF4FE, UniRef:UniRef100_A0A640N930, UniRef:UniRef50_A0A0U1MHM9, UniRef:UniRef90_Q4L4J3 contig_1 cds 1849455 1849829 - GCA012955505_02172 rapZ RapZ C-terminal domain-containing protein SO:0001217, UniRef:UniRef50_A0A5S9MHA7 contig_1 cds 1849777 1850364 - GCA012955505_02173 rapZ (pseudo) RNase adapter RapZ COG:COG1660, COG:T, GO:0005524, GO:0005525, KEGG:K06958, SO:0001217, UniRef:UniRef50_Q2G039, UniRef:UniRef90_Q4L4J2 contig_1 cds 1850563 1851504 - GCA012955505_02174 trxB thioredoxin-disulfide reductase COG:COG0492, COG:O, EC:1.8.1.9, GO:0004791, GO:0005737, GO:0019430, GO:0071949, KEGG:K00384, RefSeq:WP_016930986.1, SO:0001217, UniParc:UPI0002D758F8, UniRef:UniRef100_A0A640N917, UniRef:UniRef50_P80880, UniRef:UniRef90_Q5HQW4 contig_1 cds 1851568 1852455 - GCA012955505_02175 TPR domain protein SO:0001217, UniRef:UniRef50_A0A380FEX6 contig_1 cds 1852452 1852949 - GCA012955505_02176 tetratricopeptide repeat protein SO:0001217, UniRef:UniRef50_UPI0027F52666, UniRef:UniRef90_UPI0027F52666 contig_1 cds 1852966 1853445 - GCA012955505_02177 wbbJ Acyltransferase COG:COG0110, COG:R, RefSeq:WP_016930984.1, SO:0001217, UniParc:UPI0003112F52, UniRef:UniRef100_A0A640N922, UniRef:UniRef50_Q5HHQ6, UniRef:UniRef90_A0A2J8BFW6 contig_1 cds 1853442 1854290 - GCA012955505_02178 lgt prolipoprotein diacylglyceryl transferase COG:COG0682, COG:M, EC:2.5.1.145, GO:0005886, GO:0008961, GO:0009249, GO:0016020, GO:0042158, RefSeq:WP_016930983.1, SO:0001217, UniParc:UPI00030940A2, UniRef:UniRef100_A0A640N920, UniRef:UniRef50_Q49VV9, UniRef:UniRef90_Q4L4I8 contig_1 cds 1854294 1855229 - GCA012955505_02179 hprK HPr(Ser) kinase/phosphatase COG:COG1493, COG:T, EC:2.7.11.-, EC:2.7.4.-, GO:0000155, GO:0000160, GO:0000287, GO:0004674, GO:0004712, GO:0005524, GO:0006109, KEGG:K06023, RefSeq:WP_011276393.1, SO:0001217, UniParc:UPI000054BDAE, UniRef:UniRef100_Q4L4I7, UniRef:UniRef50_O34483, UniRef:UniRef90_Q4L4I7 contig_1 cds 1855554 1858388 - GCA012955505_02180 uvrA excinuclease ABC subunit UvrA COG:COG0178, COG:L, EC:3.1.25.-, GO:0003677, GO:0005524, GO:0005737, GO:0006289, GO:0008270, GO:0009380, GO:0009381, GO:0009432, GO:0016887, KEGG:K03701, RefSeq:WP_016930982.1, SO:0001217, UniParc:UPI0002EBF3D3, UniRef:UniRef100_A0A640N943, UniRef:UniRef50_Q8CPY9, UniRef:UniRef90_Q8CPY9 contig_1 cds 1858496 1860385 - GCA012955505_02181 uvrB excinuclease ABC subunit UvrB COG:COG0556, COG:L, EC:3.1.25.-, GO:0003677, GO:0005515, GO:0005524, GO:0005737, GO:0006289, GO:0009380, GO:0009381, GO:0009432, GO:0016787, GO:0016887, KEGG:K03702, SO:0001217, UniRef:UniRef50_P56981, UniRef:UniRef90_Q4L4I5 contig_1 cds 1860656 1860883 - GCA012955505_02182 csbA DUF2198 domain-containing protein COG:COG4897, COG:S, RefSeq:WP_011276396.1, SO:0001217, UniParc:UPI000054BDB1, UniRef:UniRef100_A0A640N957, UniRef:UniRef50_Q2G051, UniRef:UniRef90_A0A380G4G7 contig_1 cds 1860889 1861530 - GCA012955505_02183 HD domain-containing protein RefSeq:WP_016930980.1, SO:0001217, UniParc:UPI0003081239, UniRef:UniRef100_A0A640N963, UniRef:UniRef50_A0A239ZXJ0, UniRef:UniRef90_A0A2K4DUY0 contig_1 cds 1861737 1862555 - GCA012955505_02184 Dehydrogenase RefSeq:WP_016930979.1, SO:0001217, UniParc:UPI000311F89F, UniRef:UniRef100_A0A2A1KAG5, UniRef:UniRef50_A0A086Z060, UniRef:UniRef90_A0A380G3M6 contig_1 cds 1862943 1863833 - GCA012955505_02185 CHAP domain-containing protein COG:COG3942, COG:M, SO:0001217, UniRef:UniRef50_A0A3S7GTP8, UniRef:UniRef90_Q4L4I0 contig_1 cds 1863936 1864934 - GCA012955505_02186 prfB peptide chain release factor 2 COG:COG1186, COG:J, GO:0005737, GO:0006415, GO:0016149, GO:0075523, KEGG:K02836, SO:0001217, UniParc:UPI00038246F1, UniRef:UniRef100_A0A640N973, UniRef:UniRef50_Q49VV3, UniRef:UniRef90_Q4L4H9 contig_1 cds 1865156 1867693 - GCA012955505_02187 secA preprotein translocase subunit SecA COG:COG0653, COG:U, EC:7.4.2.8, GO:0005524, GO:0005829, GO:0005886, GO:0006605, GO:0006886, GO:0008564, GO:0017038, GO:0031522, GO:0043952, GO:0046872, GO:0065002, KEGG:K03070, RefSeq:WP_016930976.1, SO:0001217, UniParc:UPI000305E58E, UniRef:UniRef100_A0A640N960, UniRef:UniRef50_O06446, UniRef:UniRef90_O06446 contig_1 cds 1868124 1868702 - GCA012955505_02188 hpf ribosome hibernation-promoting factor, HPF/YfiA family COG:COG1544, COG:J, GO:0005840, GO:0022627, GO:0043024, GO:0045182, GO:0045900, KEGG:K05808, RefSeq:WP_016930975.1, SO:0001217, UniParc:UPI0002DBDB98, UniRef:UniRef100_A0A640N955, UniRef:UniRef50_P28368, UniRef:UniRef90_Q4L4H7 contig_1 cds 1868764 1869438 - GCA012955505_02189 comFC ComF family protein COG:COG1040, COG:R, SO:0001217, UniRef:UniRef50_Q2G056, UniRef:UniRef90_Q4L4H6 contig_1 cds 1869431 1870687 - GCA012955505_02190 comFA ComF operon protein 1 COG:COG4098, COG:L, KEGG:K02240, RefSeq:WP_016930973.1, SO:0001217, UniParc:UPI0002E0AB8B, UniRef:UniRef100_A0A640N964, UniRef:UniRef50_S2XU73, UniRef:UniRef90_Q4L4H5 contig_1 cds 1870833 1871699 - GCA012955505_02191 fakB1 fatty acid kinase binding subunit FakB1 COG:COG1307, COG:I, RefSeq:WP_016930972.1, SO:0001217, UniParc:UPI0002D2BB92, UniRef:UniRef100_A0A640N959, UniRef:UniRef50_P0A0N1, UniRef:UniRef90_Q4L4H4 contig_1 cds 1871843 1872484 + GCA012955505_02192 yIH1 YigZ family protein COG:COG1739, COG:R, RefSeq:WP_011276405.1, SO:0001217, UniParc:UPI000054BDBC, UniRef:UniRef100_A0A640N987, UniRef:UniRef50_Q2G059, UniRef:UniRef90_A0A2K0A9I3 contig_1 cds 1872545 1873630 - GCA012955505_02193 rfe Lipophilic protein affecting lysis rate and methicillin resistance level protein COG:COG0472, COG:M, EC:2.7.8.33, EC:2.7.8.35, KEGG:K02851, RefSeq:WP_011276406.1, SO:0001217, UniParc:UPI000054BDBD, UniRef:UniRef100_A0A640N980, UniRef:UniRef50_A0A380GAZ8, UniRef:UniRef90_A0A380G276 contig_1 cds 1873862 1874317 + GCA012955505_02194 LytS/YhcK type 5TM receptor domain-containing protein SO:0001217, UniRef:UniRef50_UPI0010F27EF8 contig_1 cds 1874368 1874919 + GCA012955505_02195 GGDEF domain-containing protein SO:0001217, UniRef:UniRef50_A0AA94F8T1 contig_1 cds 1875143 1875904 + GCA012955505_02196 yjjP Threonine/serine exporter-like N-terminal domain-containing protein COG:C, COG:COG2966, RefSeq:WP_011276408.1, SO:0001217, UniParc:UPI000054BDBF, UniRef:UniRef100_A0A640N995, UniRef:UniRef50_A0A853V662, UniRef:UniRef90_Q2G062 contig_1 cds 1875921 1876415 + GCA012955505_02197 yjjB Threonine/Serine exporter ThrE domain-containing protein COG:C, COG:COG3610, RefSeq:WP_011276409.1, SO:0001217, UniParc:UPI000054BDC0, UniRef:UniRef100_A0A640N9A2, UniRef:UniRef50_Q2G063, UniRef:UniRef90_A0A653Z4F8 contig_1 cds 1876430 1877659 + GCA012955505_02198 pepT peptidase T COG:COG2195, COG:E, EC:3.4.11.4, GO:0005829, GO:0006508, GO:0008237, GO:0008270, GO:0043171, GO:0045148, KEGG:K01258, RefSeq:WP_016930971.1, SO:0001217, UniParc:UPI0003075D45, UniRef:UniRef100_A0A640N992, UniRef:UniRef50_Q89YZ7, UniRef:UniRef90_Q4L4G8 contig_1 cds 1877735 1878856 - GCA012955505_02199 glxK Glycerate kinase COG:COG1929, COG:G, EC:2.7.1.165, KEGG:K00865, RefSeq:WP_011276411.1, SO:0001217, UniParc:UPI000054BDC2, UniRef:UniRef100_A0A640N986, UniRef:UniRef50_A0A6N3ELY9, UniRef:UniRef90_A0A2K0A9J3 contig_1 cds 1879166 1879486 - GCA012955505_02200 ytxJ Bacillithiol system redox-active protein YtxJ KEGG:K26959, RefSeq:WP_011276412.1, SO:0001217, UniParc:UPI000054BDC3, UniRef:UniRef100_A0A640N988, UniRef:UniRef50_Q2G066, UniRef:UniRef90_A0A640N988 contig_1 cds 1879619 1880065 - GCA012955505_02201 EMYY motif lipoprotein SO:0001217, UniRef:UniRef50_UPI0037DCBD65 contig_1 cds 1880104 1880460 - GCA012955505_02202 EMYY motif lipoprotein SO:0001217, UniRef:UniRef50_UPI000D1C72FD contig_1 cds 1880570 1881085 + GCA012955505_02203 grpB GrpB COG:COG2320, COG:R, RefSeq:WP_029376645.1, SO:0001217, UniParc:UPI000314D092, UniRef:UniRef100_A0A7Z1N0H8, UniRef:UniRef50_Q5HQZ0, UniRef:UniRef90_A0A7Z1N0H8 contig_1 cds 1881175 1882098 + GCA012955505_02204 murB UDP-N-acetylmuramate dehydrogenase COG:COG0812, COG:M, EC:1.3.1.98, GO:0005829, GO:0008360, GO:0008762, GO:0009252, GO:0051301, GO:0071555, GO:0071949, RefSeq:WP_011276415.1, SO:0001217, UniParc:UPI000054BDC6, UniRef:UniRef100_Q4L4G3, UniRef:UniRef50_A4ILI2, UniRef:UniRef90_Q4L4G3 contig_1 cds 1882128 1882445 + GCA012955505_02205 hot13 CHY-type domain-containing protein COG:COG4357, COG:O, SO:0001217, UniRef:UniRef50_S2Y7P6, UniRef:UniRef90_A0A2K0A9Z8 contig_1 cds 1882424 1883356 - GCA012955505_02206 Fe/B12 periplasmic-binding domain-containing protein SO:0001217, UniRef:UniRef50_A0A239ZZP9, UniRef:UniRef90_Q4L4G1 contig_1 cds 1883596 1883943 - GCA012955505_02207 ABC transporter substrate-binding protein SO:0001217, UniRef:UniRef50_UPI00203C0A5E, UniRef:UniRef90_UPI000AB3BD28 contig_1 cds 1883949 1884524 - GCA012955505_02208 Cobalamin Fe3+-siderophores ABC transporter periplasmic protein SO:0001217, UniRef:UniRef50_A0A380FF40 contig_1 cds 1884640 1885161 - GCA012955505_02209 ATP-binding cassette domain-containing protein SO:0001217, UniRef:UniRef50_UPI002E8DD787 contig_1 cds 1885414 1886373 - GCA012955505_02210 ceuC Iron chelate uptake ABC transporter family permease subunit COG:COG4605, COG:P, RefSeq:WP_011276421.1, SO:0001217, UniParc:UPI000054BDCC, UniRef:UniRef100_A0A640N9C1, UniRef:UniRef50_W8TNI3, UniRef:UniRef90_A0A5B2YWV5 contig_1 cds 1886363 1887331 - GCA012955505_02211 ceuB Iron ABC transporter permease COG:COG4606, COG:P, RefSeq:WP_011276422.1, SO:0001217, UniParc:UPI000054BDCD, UniRef:UniRef100_A0A640N9B7, UniRef:UniRef50_P94418, UniRef:UniRef90_A0A2J8BFY8 contig_1 cds 1887581 1888549 - GCA012955505_02212 nrdF class 1b ribonucleoside-diphosphate reductase subunit beta COG:COG0208, COG:F, EC:1.17.4.1, GO:0004748, GO:0005971, GO:0009263, RefSeq:WP_011276423.1, SO:0001217, UniParc:UPI000054BDCE, UniRef:UniRef100_A0A640N9B4, UniRef:UniRef50_A0A1L8Y4Q5, UniRef:UniRef90_A0A1L8Y4Q5 contig_1 cds 1888677 1890782 - GCA012955505_02213 nrdE class 1b ribonucleoside-diphosphate reductase subunit alpha COG:COG0209, COG:F, EC:1.17.4.1, GO:0004748, GO:0005524, GO:0006260, RefSeq:WP_011276424.1, SO:0001217, UniParc:UPI000054BDCF, UniRef:UniRef100_A0A640N9C7, UniRef:UniRef50_A0A240A193, UniRef:UniRef90_A0AAE3D4Q3 contig_1 cds 1890745 1891143 - GCA012955505_02214 nrdI class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI COG:COG1780, COG:F, GO:0009263, GO:0010181, GO:0036211, KEGG:K03647, SO:0001217, UniRef:UniRef50_Q2G079, UniRef:UniRef90_Q4L4F3 contig_1 cds 1891932 1892816 + GCA012955505_02215 rhaT EamA domain-containing protein COG:COG0697, COG:GER, RefSeq:WP_011276426.1, SO:0001217, UniParc:UPI000054BDD1, UniRef:UniRef100_A0A2A1K718, UniRef:UniRef50_S2XME9, UniRef:UniRef90_A0A1J3ZXE1 contig_1 cds 1892822 1893322 + GCA012955505_02216 queF preQ(1) synthase COG:COG0780, COG:J, EC:1.7.1.13, GO:0005737, GO:0006400, GO:0008616, GO:0033739, GO:0046857, RefSeq:WP_011276427.1, SO:0001217, UniParc:UPI000054BDD2, UniRef:UniRef100_Q4L4F1, UniRef:UniRef50_Q9KAP6, UniRef:UniRef90_Q4L4F1 contig_1 cds 1893623 1895128 + GCA012955505_02217 pTR2 S-Cys-Gly-3M3SH uptake peptide MFS transporter BlastRules:WP_048682169, COG:COG3104, COG:E, RefSeq:WP_011276428.1, SO:0001217, UniParc:UPI000054BDD3, UniRef:UniRef100_A0A640N9C6, UniRef:UniRef50_Q2G082, UniRef:UniRef90_A0A2K0A9J5 contig_1 ncRNA 1895271 1895521 - GCA012955505_02218 S35 Staphylococcus sRNA 35 (srn_0335) RFAM:RF02894, SO:0000655 contig_1 ncRNA 1895690 1895904 - GCA012955505_02219 S35 Staphylococcus sRNA 35 (srn_0335) RFAM:RF02894, SO:0000655 contig_1 cds 1896048 1896920 + GCA012955505_02220 lCB5 Putative lipid kinase SH2167 COG:COG1597, COG:IR, EC:2.7.1.-, GO:0004143, GO:0005524, GO:0005886, GO:0008654, GO:0046872, SO:0001217, UniRef:UniRef50_Q6GIR5, UniRef:UniRef90_Q4L4E9 contig_1 cds 1896993 1897526 - GCA012955505_02221 yorC Putative 5'(3')-deoxyribonucleotidase COG:COG4502, COG:F, RefSeq:WP_011276430.1, SO:0001217, UniParc:UPI000054BDD5, UniRef:UniRef100_A0A640N9G4, UniRef:UniRef50_Q5HR07, UniRef:UniRef90_A0A380G1M0 contig_1 cds 1897701 1898756 - GCA012955505_02222 hisC histidinol-phosphate transaminase COG:COG0079, COG:E, EC:2.6.1.9, GO:0000105, GO:0004400, GO:0030170, KEGG:K00817, RefSeq:WP_011276431.1, SO:0001217, UniParc:UPI000054BDD6, UniRef:UniRef100_Q4L4E7, UniRef:UniRef50_Q2G087, UniRef:UniRef90_Q4L4E7 contig_1 cds 1898864 1900378 - GCA012955505_02223 pTR2 Major facilitator superfamily (MFS) profile domain-containing protein COG:COG3104, COG:E, RefSeq:WP_016930966.1, SO:0001217, UniParc:UPI0002E8249A, UniRef:UniRef100_A0A2A1K5B8, UniRef:UniRef50_Q2G082, UniRef:UniRef90_Q4L4E6 contig_1 cds 1900549 1901028 - GCA012955505_02224 ABC-type glycine betaine transport system substrate-binding domain-containing protein SO:0001217, UniRef:UniRef50_A0A5J4JFS5 contig_1 cds 1901031 1901909 - GCA012955505_02225 ABC transporter permease/substrate-binding protein SO:0001217, UniRef:UniRef50_UPI000BF1C96A contig_1 cds 1901906 1902874 - GCA012955505_02226 opuBA ABC transporter ATP-binding protein COG:COG1125, COG:E, RefSeq:WP_011276434.1, SO:0001217, UniParc:UPI000054BDD9, UniRef:UniRef100_A0A640N9G2, UniRef:UniRef50_Q7AP69, UniRef:UniRef90_A0A2K0A9K7 contig_1 cds 1903059 1903232 - GCA012955505_02227 recQ ATP-dependent DNA helicase RecQ SO:0001217, UniRef:UniRef50_A0A380E337 contig_1 cds 1903229 1904848 - GCA012955505_02228 recQ DNA helicase RecQ COG:COG0514, COG:L, EC:5.6.2.4, GO:0003678, GO:0006310, GO:0009432, SO:0001217, UniRef:UniRef50_Q2G090, UniRef:UniRef90_A0A380G4K9 contig_1 cds 1904863 1906743 - GCA012955505_02229 abc-f ribosomal protection-like ABC-F family protein COG:COG0488, COG:R, GO:0003677, GO:0005524, GO:0016887, RefSeq:WP_011276436.1, SO:0001217, UniParc:UPI000054BDDB, UniRef:UniRef100_Q4L4E2, UniRef:UniRef50_S2Y7N2, UniRef:UniRef90_A0A2T4L468 contig_1 cds 1906863 1907681 + GCA012955505_02230 zupT ZIP family metal transporter COG:COG0428, COG:P, RefSeq:WP_011276437.1, SO:0001217, UniParc:UPI000054BDDC, UniRef:UniRef100_A0A640N9H6, UniRef:UniRef50_S2XN82, UniRef:UniRef90_A0A2K0A9L8 contig_1 cds 1907902 1909794 - GCA012955505_02231 ltaS polyglycerol-phosphate lipoteichoic acid synthase LtaS BlastRules:WP_000098285, COG:COG1368, COG:M, EC:2.7.8.20, GO:0005576, GO:0005886, GO:0016740, GO:0046872, GO:0070395, GO:0071555, KEGG:K19005, SO:0001217, UniRef:UniRef50_Q797B3, UniRef:UniRef90_Q4L4D7 contig_1 cds 1910152 1911156 - GCA012955505_02232 pxpC Biotin-dependent carboxyltransferase family protein COG:COG1984, COG:E, RefSeq:WP_011276441.1, SO:0001217, UniParc:UPI000054BDE0, UniRef:UniRef100_A0A2A1K6Q6, UniRef:UniRef50_Q2G094, UniRef:UniRef90_A0A5B2YX45 contig_1 cds 1911144 1911860 - GCA012955505_02233 pxpB Allophanate hydrolase COG:COG2049, COG:E, RefSeq:WP_011276442.1, SO:0001217, UniParc:UPI000054BDE1, UniRef:UniRef100_A0A2A1K5Z8, UniRef:UniRef50_A0A143PAI6, UniRef:UniRef90_A0A2A1K5Z8 contig_1 cds 1911885 1912091 - GCA012955505_02234 DUF1146 domain-containing protein RefSeq:WP_011276443.1, SO:0001217, UniParc:UPI000054BDE2, UniRef:UniRef100_A0A7Z1N657, UniRef:UniRef50_A0A5B2YW26, UniRef:UniRef90_A0A5B2YW26 contig_1 cds 1912149 1912757 - GCA012955505_02235 ilvE Aminodeoxychorismate lyase COG:COG0115, COG:EH, RefSeq:WP_011276444.1, SO:0001217, UniParc:UPI000054BDE3, UniRef:UniRef100_Q4L4D3, UniRef:UniRef50_A0A8I1BDA0, UniRef:UniRef90_Q4L4D3 contig_1 cds 1912758 1913903 - GCA012955505_02236 trpE Chorismate-utilising enzyme C-terminal domain-containing protein COG:COG0147, COG:EH, RefSeq:WP_016930964.1, SO:0001217, UniParc:UPI0002E422CD, UniRef:UniRef100_A0A2A1K8A5, UniRef:UniRef50_A0A418IG77, UniRef:UniRef90_Q4L4D2 contig_1 cds 1913887 1914480 - GCA012955505_02237 pabA Type 1 glutamine amidotransferase COG:COG0512, COG:EH, RefSeq:WP_011276446.1, SO:0001217, UniParc:UPI000054BDE5, UniRef:UniRef100_A0A7Z1N5H6, UniRef:UniRef50_A0A2T7BWH4, UniRef:UniRef90_A0A7Z1N5H6 contig_1 ncRNA-region 1914635 1914681 + PreQ1 (pre queuosine) riboswitch aptamer RFAM:RF00522, SO:0000035 contig_1 cds 1914843 1915514 + GCA012955505_02238 queC 7-cyano-7-deazaguanine synthase QueC COG:COG0603, COG:J, EC:6.3.4.20, GO:0005524, GO:0008270, GO:0008616, GO:0016879, KEGG:K06920, RefSeq:WP_011276447.1, SO:0001217, UniParc:UPI000054BDE6, UniRef:UniRef100_Q4L4D0, UniRef:UniRef50_O31675, UniRef:UniRef90_Q4L4D0 contig_1 cds 1915516 1915935 + GCA012955505_02239 queD 6-carboxytetrahydropterin synthase QueD COG:COG0720, COG:H, EC:4.1.2.50, EC:4.2.3.12, GO:0003824, GO:0008616, KEGG:K01737, RefSeq:WP_011276448.1, SO:0001217, UniParc:UPI000054BDE7, UniRef:UniRef100_A0A2A1K458, UniRef:UniRef50_O31676, UniRef:UniRef90_A0A2A1K458 contig_1 cds 1915935 1916651 + GCA012955505_02240 queE 7-carboxy-7-deazaguanine synthase QueE COG:COG0602, COG:H, EC:4.3.99.3, GO:0006400, GO:0051539, GO:1904047, KEGG:K10026, RefSeq:WP_011276449.1, SO:0001217, UniParc:UPI000054BDE8, UniRef:UniRef100_A0A2A1K9K1, UniRef:UniRef50_Q81G67, UniRef:UniRef90_A0A2A1K9K1 contig_1 cds 1916756 1917277 + GCA012955505_02241 (pseudo) DUF2273 domain-containing protein COG:COG5547, COG:S, SO:0001217, UniRef:UniRef50_A0A9X6AIW2, UniRef:UniRef50_UPI001D14BC68, UniRef:UniRef90_A0A2A1K6X2, UniRef:UniRef90_UPI001D14BC68 contig_1 cds 1917626 1918615 - GCA012955505_02242 wcaA Glycosyltransferase COG:COG0463, COG:M, RefSeq:WP_011276451.1, SO:0001217, UniParc:UPI000054BDEA, UniRef:UniRef100_A0A2A1K6P4, UniRef:UniRef50_B9DKD4, UniRef:UniRef90_A0A2A1K6P4 contig_1 cds 1918721 1919560 - GCA012955505_02243 aRA1 Aldo/keto reductase COG:COG0656, COG:Q, SO:0001217, UniRef:UniRef50_A0A7U7PXK1, UniRef:UniRef90_A0A2A1K9U4 contig_1 cds 1919801 1921177 - GCA012955505_02244 mpfA Hemolysins COG:COG1253, COG:PT, RefSeq:WP_011276453.1, SO:0001217, UniParc:UPI000054BDEC, UniRef:UniRef100_A0A7Z1SEH6, UniRef:UniRef50_A0A380G318, UniRef:UniRef90_A0A380G318 contig_1 cds 1921917 1923890 - GCA012955505_02245 ptsN PTS fructose transporter subunit IIC COG:COG1762, COG:GT, RefSeq:WP_033079543.1, SO:0001217, UniParc:UPI00044DB433, UniRef:UniRef100_A0A2A1K7S4, UniRef:UniRef50_B9DK53, UniRef:UniRef90_A0A3S7GXN0 contig_1 cds 1923896 1924816 - GCA012955505_02246 pfkB 1-phosphofructokinase COG:COG1105, COG:G, EC:2.7.1.56, GO:0008662, KEGG:K00882, RefSeq:WP_053017227.1, SO:0001217, UniParc:UPI00069E2880, UniRef:UniRef100_A0A5B2YV18, UniRef:UniRef50_Q9KWK1, UniRef:UniRef90_A0A2A1KAQ9 contig_1 cds 1924819 1925574 - GCA012955505_02247 glpR DeoR family transcriptional regulator COG:COG1349, COG:KG, RefSeq:WP_011276456.1, SO:0001217, UniParc:UPI000054BDEF, UniRef:UniRef100_A0A2A1KBB8, UniRef:UniRef50_Q2G240, UniRef:UniRef90_A0A2A1KBB8 contig_1 cds 1925728 1926207 - GCA012955505_02248 ybaK Cys-tRNA(Pro) deacylase COG:COG2606, COG:J, EC:3.1.1.-, GO:0002161, GO:0043039, KEGG:K03976, RefSeq:WP_011276457.1, SO:0001217, UniParc:UPI000054BDF0, UniRef:UniRef100_A0A2A1KCQ6, UniRef:UniRef50_A0A2T4MLR5, UniRef:UniRef90_A0A5B2YVG8 contig_1 cds 1926305 1926802 - GCA012955505_02249 Lipoprotein SO:0001217, UniRef:UniRef50_A0A2K0A9L9, UniRef:UniRef90_A0A2K0A9L9 contig_1 cds 1927051 1928223 - GCA012955505_02250 araJ Quinolone resistance protein NorA COG:COG2814, COG:G, KEGG:K19576, RefSeq:WP_011276459.1, SO:0001217, UniParc:UPI000054BDF2, UniRef:UniRef100_A0A7Z1N8B2, UniRef:UniRef50_P0A0J4, UniRef:UniRef90_A0A5B2YVD9 contig_1 cds 1928464 1928874 + GCA012955505_02251 aF0104 PPC domain-containing protein COG:COG1661, COG:R, SO:0001217, UniRef:UniRef50_Q2G0A3, UniRef:UniRef90_Q4L4B6 contig_1 cds 1929272 1929664 + GCA012955505_02252 DUF1361 domain-containing protein SO:0001217, UniRef:UniRef50_UPI00044B1E3A, UniRef:UniRef90_UPI001E5E0E9E contig_1 cds 1929661 1929939 + GCA012955505_02253 CPBP family intramembrane metalloprotease RefSeq:WP_046464831.1, SO:0001217, UniParc:UPI000623E10F, UniRef:UniRef100_UPI001C932800, UniRef:UniRef50_A0A2T4Q280, UniRef:UniRef90_A0A5B2YWW3 contig_1 cds 1930196 1931569 - GCA012955505_02254 phrB Photolyase/cryptochrome alpha/beta domain-containing protein COG:COG0415, COG:L, RefSeq:WP_053023299.1, SO:0001217, UniParc:UPI00069D73FC, UniRef:UniRef100_UPI00069D73FC, UniRef:UniRef50_D7UWG4, UniRef:UniRef90_Q4L4B3 contig_1 cds 1931668 1932381 - GCA012955505_02255 DASS family divalent anion:sodium (Na+) symporter SO:0001217, UniRef:UniRef50_A0A380E206 contig_1 cds 1932321 1933187 - GCA012955505_02256 anion permease SO:0001217, UniRef:UniRef50_UPI0031E2762B contig_1 cds 1933311 1933487 - GCA012955505_02257 (pseudo) hypothetical protein SO:0001217, UniRef:UniRef50_Q2G0A8, UniRef:UniRef90_A0A2A1KAP9 contig_1 cds 1933561 1934361 - GCA012955505_02258 yejR GTP-binding protein COG:COG0523, COG:R, SO:0001217, UniRef:UniRef50_G5JL55, UniRef:UniRef90_A0A7Z1SET4 contig_1 cds 1934572 1935009 + GCA012955505_02259 marR HTH-type transcriptional regulator MgrA COG:COG1846, COG:K, RefSeq:WP_011276467.1, SO:0001217, UniParc:UPI000054BDFA, UniRef:UniRef100_A0A7Z1SB68, UniRef:UniRef50_Q2G0B1, UniRef:UniRef90_A0A7Z1SB68 contig_1 cds 1935158 1936819 - GCA012955505_02260 cydC Amino acid ABC transporter ATP-binding/permease protein COG:CO, COG:COG4987, RefSeq:WP_145463261.1, SO:0001217, UniParc:UPI00119E0211, UniRef:UniRef100_UPI00119E0211, UniRef:UniRef50_A0A4U9TIQ0, UniRef:UniRef90_A0A7Z1SE89 contig_1 cds 1936816 1938435 - GCA012955505_02261 cydD Cysteine ABC transporter ATP-binding protein COG:CO, COG:COG4988, SO:0001217, UniRef:UniRef50_A0A0H2VEV6, UniRef:UniRef90_A0A2A1K7N0 contig_1 cds 1938565 1939440 + GCA012955505_02262 uppP undecaprenyl-diphosphate phosphatase COG:COG1968, COG:I, EC:3.6.1.27, GO:0005886, GO:0008360, GO:0009252, GO:0016020, GO:0016311, GO:0046677, GO:0050380, GO:0071555, KEGG:K06153, RefSeq:WP_011276470.1, SO:0001217, UniParc:UPI000054BDFD, UniRef:UniRef100_Q4L4A6, UniRef:UniRef50_P94507, UniRef:UniRef90_Q4L4A6 contig_1 cds 1939654 1939929 + GCA012955505_02263 (pseudo) hypothetical protein SO:0001217, UniRef:UniRef50_A0A380H9S9, UniRef:UniRef50_A0AAP8PPZ3, UniRef:UniRef90_UPI00051A34DD contig_1 cds 1940009 1940170 + GCA012955505_02264 hypothetical protein contig_1 cds 1940177 1940623 + GCA012955505_02265 yaiI YaiI/YqxD family protein COG:COG1671, COG:S, KEGG:K09768, RefSeq:WP_011276472.1, SO:0001217, UniParc:UPI000054BDFF, UniRef:UniRef100_Q4L4A4, UniRef:UniRef50_Q2G0B6, UniRef:UniRef90_Q4L4A4 contig_1 cds 1940635 1941201 + GCA012955505_02266 ppnN Cytokinin riboside 5'-monophosphate phosphoribohydrolase COG:COG1611, COG:F, EC:3.2.2.-, KEGG:K22522, RefSeq:WP_011276473.1, SO:0001217, UniParc:UPI000054BE00, UniRef:UniRef100_A0A2S6DPY3, UniRef:UniRef50_A0A9X5XNB6, UniRef:UniRef90_A0A2S6DPY3 contig_1 cds 1941292 1941837 - GCA012955505_02267 rimL N-acetyltransferase COG:COG1670, COG:JO, RefSeq:WP_011276474.1, SO:0001217, UniParc:UPI000054BE01, UniRef:UniRef100_A0A7Z1N7N1, UniRef:UniRef50_S2Y7I5, UniRef:UniRef90_A0A7Z1N7N1 contig_1 cds 1941939 1942235 - GCA012955505_02268 Phage protein RefSeq:WP_011276475.1, SO:0001217, UniParc:UPI000054BE02, UniRef:UniRef100_A0A2A1KAN8, UniRef:UniRef50_A0A240BWH3, UniRef:UniRef90_A0A2A1KAN8 contig_1 cds 1942415 1942903 - GCA012955505_02269 SA0632 family lipoprotein RefSeq:WP_016930916.1, SO:0001217, UniParc:UPI0002FA6F2E, UniRef:UniRef100_A0A7Z1N7Z0, UniRef:UniRef50_Q4L4A0, UniRef:UniRef90_Q4L4A0 contig_1 cds 1942969 1943418 - GCA012955505_02270 mnaT GNAT family N-acetyltransferase COG:COG1247, COG:E, RefSeq:WP_011276477.1, SO:0001217, UniParc:UPI000054BE04, UniRef:UniRef100_A0A7Z1N847, UniRef:UniRef50_A0A7Z1N847, UniRef:UniRef90_A0A7Z1N847 contig_1 cds 1943537 1944112 + GCA012955505_02271 DUF1129 domain-containing protein SO:0001217, UniRef:UniRef50_Q49VL9, UniRef:UniRef90_A0A2A1K9C5 contig_1 cds 1944289 1944777 - GCA012955505_02272 yqgC DUF456 domain-containing protein COG:COG2839, COG:S, KEGG:K09793, RefSeq:WP_011276479.1, SO:0001217, UniParc:UPI000054BE06, UniRef:UniRef100_A0A2A1K7L8, UniRef:UniRef50_A0A268HDW9, UniRef:UniRef90_A0A2A1K7L8 contig_1 cds 1944777 1945997 - GCA012955505_02273 MFS transporter KEGG:K03291, RefSeq:WP_016930915.1, SO:0001217, UniParc:UPI0002E6412D, UniRef:UniRef100_A0A2A1KCM7, UniRef:UniRef50_B9EA75, UniRef:UniRef90_A0A2A1KCM7 contig_1 cds 1946042 1946896 - GCA012955505_02274 lysR HTH lysR-type domain-containing protein COG:COG0583, COG:K, RefSeq:WP_016930914.1, SO:0001217, UniParc:UPI00031EB6BE, UniRef:UniRef100_A0A7Z1SET8, UniRef:UniRef50_Q2G0C6, UniRef:UniRef90_Q2G0C6 contig_1 cds 1947039 1947650 - GCA012955505_02275 DUF402 domain-containing protein COG:COG2306, COG:R, KEGG:K09145, RefSeq:WP_016930913.1, SO:0001217, UniParc:UPI0002F3E664, UniRef:UniRef100_A0A2A1K9Q8, UniRef:UniRef50_Q5HR66, UniRef:UniRef90_A0A2A1K9Q8 contig_1 cds 1947872 1948975 + GCA012955505_02276 metE 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase COG:COG0620, COG:E, EC:2.1.1.14, KEGG:K00549, RefSeq:WP_049394543.1, SO:0001217, UniParc:UPI00066A54A3, UniRef:UniRef100_UPI00066A54A3, UniRef:UniRef50_A0A2X4WFG1, UniRef:UniRef90_A0A7Z1SE94 contig_1 cds 1949035 1949523 - GCA012955505_02277 cFF1 DUF985 domain-containing protein COG:COG3542, COG:R, KEGG:K09705, RefSeq:WP_016930911.1, SO:0001217, UniParc:UPI000317124D, UniRef:UniRef100_A0A2A1K7P1, UniRef:UniRef50_A0A075U0C5, UniRef:UniRef90_Q4L492 contig_1 cds 1949523 1950239 - GCA012955505_02278 tACO1 YebC/PmpR family DNA-binding transcriptional regulator COG:COG0217, COG:KJ, GO:0003677, GO:0005829, GO:0006355, RefSeq:WP_011276485.1, SO:0001217, UniParc:UPI000054BE0C, UniRef:UniRef100_Q4L491, UniRef:UniRef50_P0A8A2, UniRef:UniRef90_Q2G0D0 contig_1 cds 1950308 1950667 - GCA012955505_02279 marR MarR family transcriptional regulator SO:0001217, UniRef:UniRef50_Q2G0D1, UniRef:UniRef90_A0A7Z1N890 contig_1 cds 1950889 1951515 - GCA012955505_02280 (pseudo) hypothetical protein SO:0001217, UniRef:UniRef50_UPI000A96055F, UniRef:UniRef50_UPI0028A3C91E, UniRef:UniRef90_UPI000A96055F contig_1 cds 1951518 1952162 - GCA012955505_02281 (pseudo) helix-turn-helix domain-containing protein SO:0001217, UniRef:UniRef50_UPI000A844B8D, UniRef:UniRef90_UPI001F54159F contig_1 cds 1952252 1952875 - GCA012955505_02282 (pseudo) helix-turn-helix transcriptional regulator SO:0001217, UniRef:UniRef50_UPI001D14D3DD, UniRef:UniRef50_UPI001F545631, UniRef:UniRef90_UPI001D14D3DD, UniRef:UniRef90_UPI001F545631 contig_1 cds 1953197 1953856 - GCA012955505_02283 ybhL Transporter COG:COG0670, COG:P, RefSeq:WP_011276488.1, SO:0001217, UniParc:UPI000054BE0F, UniRef:UniRef100_Q4L488, UniRef:UniRef50_Q2G0D3, UniRef:UniRef90_Q4L488 contig_1 cds 1954290 1955108 + GCA012955505_02284 Peptidase M23 COG:COG3942, COG:M, RefSeq:WP_011276489.1, SO:0001217, UniParc:UPI000054BE10, UniRef:UniRef100_Q4L487, UniRef:UniRef50_Q2G0D4, UniRef:UniRef90_Q4L487 contig_1 cds 1955434 1956438 - GCA012955505_02285 pitA Anion permease COG:COG0306, COG:P, KEGG:K03306, RefSeq:WP_011276490.1, SO:0001217, UniParc:UPI000054BE11, UniRef:UniRef100_A0A2A1KCL7, UniRef:UniRef50_S2XTX6, UniRef:UniRef90_A0A2A1KCL7 contig_1 cds 1956453 1957028 - GCA012955505_02286 ykaA DUF47 domain-containing protein COG:COG1392, COG:P, SO:0001217, UniRef:UniRef50_A0A919WW74, UniRef:UniRef90_Q2G0D6 contig_1 cds 1957459 1958433 - GCA012955505_02287 (pseudo) ABC transporter permease SO:0001217, UniRef:UniRef50_UPI001F5446C3, UniRef:UniRef90_UPI00285FBF03 contig_1 cds 1958456 1958965 - GCA012955505_02288 FtsX-like permease family protein SO:0001217, UniRef:UniRef50_UPI002863E730, UniRef:UniRef90_UPI002863E730 contig_1 cds 1958962 1959693 - GCA012955505_02289 lolD ABC transporter ATP-binding protein COG:COG1136, COG:M, KEGG:K19079, SO:0001217, UniRef:UniRef50_O34697, UniRef:UniRef90_A0A2K0A9Q6 contig_1 cds 1959831 1960865 - GCA012955505_02290 graS Sensor histidine kinase GraS COG:COG0642, COG:T, EC:2.7.13.3, GO:0000155, GO:0004721, GO:0005524, GO:0005886, GO:0016036, GO:0046677, KEGG:K19077, RefSeq:WP_011276494.1, SO:0001217, UniParc:UPI000054BE15, UniRef:UniRef100_Q4L482, UniRef:UniRef50_Q8NXR5, UniRef:UniRef90_Q4L482 contig_1 cds 1960858 1961532 - GCA012955505_02291 graR response regulator transcription factor GraR/ApsR BlastRules:WP_001166505, BlastRules:WP_001832046, COG:COG0745, COG:TK, GO:0000156, GO:0000976, GO:0005829, GO:0006355, GO:0032993, GO:0046677, KEGG:K19078, SO:0001217, UniRef:UniRef50_Q2G0E0, UniRef:UniRef90_Q4L481 contig_1 cds 1961547 1962329 - GCA012955505_02292 wcaG 3-beta hydroxysteroid dehydrogenase COG:COG0451, COG:M, SO:0001217, UniRef:UniRef50_Q2G0E1, UniRef:UniRef90_A0A2A1KB79 contig_1 cds 1962578 1963084 + GCA012955505_02293 rimL N-acetyltransferase COG:COG1670, COG:JO, RefSeq:WP_011276497.1, SO:0001217, UniParc:UPI000054BE18, UniRef:UniRef100_A0A2A1KCL1, UniRef:UniRef50_Q2G0E2, UniRef:UniRef90_A0A2A1KCL1 contig_1 cds 1963321 1964316 - GCA012955505_02294 aes Lipase COG:COG0657, COG:I, SO:0001217, UniRef:UniRef50_A0A240BV45, UniRef:UniRef90_A0A2A1K9A1 contig_1 cds 1964451 1965362 - GCA012955505_02295 Branched-chain amino acid transport system carrier protein SO:0001217, UniRef:UniRef50_K9AMJ6 contig_1 cds 1965766 1966266 - GCA012955505_02296 Immunity protein 30 domain-containing protein RefSeq:WP_145463259.1, SO:0001217, UniParc:UPI00119DD36A, UniRef:UniRef100_UPI00119DD36A, UniRef:UniRef50_S2YNQ8, UniRef:UniRef90_A0A7Z1SFN5 contig_1 cds 1966365 1966511 - GCA012955505_02297 hypothetical protein contig_1 cds 1966508 1966852 - GCA012955505_02298 DAK2 domain-containing protein SO:0001217, UniRef:UniRef50_UPI0022079EF3 contig_1 cds 1966827 1967087 - GCA012955505_02299 DAK2 domain-containing protein SO:0001217, UniRef:UniRef50_UPI0030C4F166 contig_1 cds 1967223 1967879 - GCA012955505_02300 dhaK DhaK domain-containing protein SO:0001217, UniRef:UniRef50_A0A0W1AZD2 contig_1 cds 1968265 1968717 - GCA012955505_02301 iron ABC transporter permease SO:0001217, UniRef:UniRef50_UPI0015D934F6, UniRef:UniRef90_UPI0015D934F6 contig_1 cds 1969060 1969287 - GCA012955505_02302 iron chelate uptake ABC transporter family permease subunit SO:0001217, UniRef:UniRef50_UPI00132F7C99 contig_1 cds 1969471 1969926 - GCA012955505_02303 fepD (pseudo) ABC-type cobalamin/Fe3+-siderophores transport systems, permease components COG:COG0609, COG:P, SO:0001217, UniRef:UniRef50_B9E9G3, UniRef:UniRef90_Q4L470 contig_1 cds 1969883 1970380 - GCA012955505_02304 fepC (pseudo) Cobalamin/Fe3+-siderophores ABC transporter ATPase COG:COG1120, COG:PH, SO:0001217, UniRef:UniRef50_R2PWZ5, UniRef:UniRef90_A0A380G1E4 contig_1 cds 1970392 1970541 - GCA012955505_02305 fhuA Ferrichrome transport ATP-binding protein fhuA SO:0001217, UniRef:UniRef50_A0A380DND8 contig_1 cds 1970773 1971288 - GCA012955505_02306 Membrane protein SO:0001217, UniRef:UniRef50_A0A380E0X1 contig_1 ncRNA 1971455 1971643 + GCA012955505_02307 rsaD RNA Staph. aureus D RFAM:RF01819, SO:0000655 contig_1 cds 1971753 1972088 - GCA012955505_02308 Nucleoside transport protein SO:0001217, UniRef:UniRef50_A0A1Z5IXI0 contig_1 cds 1972109 1972726 - GCA012955505_02309 Na+ dependent nucleoside transporter N-terminal domain-containing protein SO:0001217, UniRef:UniRef50_UPI0023AFEDB8 contig_1 cds 1972744 1973295 - GCA012955505_02310 hypothetical protein contig_1 cds 1973300 1974592 - GCA012955505_02311 CDP-glycerol glycerophosphotransferase family protein SO:0001217, UniRef:UniRef50_UPI000E692ECE contig_1 cds 1974613 1975722 - GCA012955505_02312 Poly(Glycerol-phosphate) alpha-glucosyltransferase RefSeq:WP_260846009.1, SO:0001217, UniParc:UPI0021B2FEBF, UniRef:UniRef100_A0A2A1K7M2, UniRef:UniRef50_A0AAW5LL89, UniRef:UniRef90_A0A2A1K7M2 contig_1 cds 1975719 1976105 - GCA012955505_02313 truncated UDP-glucose:polyglycerol phosphate glucosyltransferase SO:0001217, UniRef:UniRef50_A0A2T4KAG9, UniRef:UniRef90_UPI000054BE27 contig_1 cds 1976386 1977393 - GCA012955505_02314 ABC transporter ATP-binding protein SO:0001217, UniRef:UniRef50_UPI00115B6E12 contig_1 cds 1977535 1978263 + GCA012955505_02315 serine hydrolase SO:0001217, UniRef:UniRef50_UPI0015D8BC4D, UniRef:UniRef90_UPI0015D8BC4D contig_1 cds 1978220 1978831 + GCA012955505_02316 DUF1958 domain-containing protein SO:0001217, UniRef:UniRef50_UPI0015D83531, UniRef:UniRef90_UPI0015D83531 contig_1 cds 1979185 1979370 - GCA012955505_02317 hypothetical protein PFAM:PF01467.32 contig_1 cds 1979560 1979907 - GCA012955505_02318 hypothetical protein contig_1 cds 1980383 1980970 + GCA012955505_02319 Teichoic acids export protein ATP-binding subunit SO:0001217, UniRef:UniRef50_A0A380FEH2 contig_1 cds 1981065 1981829 - GCA012955505_02320 tarA N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase TarA COG:COG1922, COG:M, EC:2.4.1.187, GO:0019350, GO:0047244, KEGG:K05946, RefSeq:WP_011276520.1, SO:0001217, UniParc:UPI000054BE2F, UniRef:UniRef100_Q4L458, UniRef:UniRef50_Q2G2L3, UniRef:UniRef90_Q4L458 contig_1 cds 1981977 1982720 + GCA012955505_02321 M50 family peptidase RefSeq:WP_011276521.1, SO:0001217, UniParc:UPI000054BE30, UniRef:UniRef100_A0A2A1K4Z1, UniRef:UniRef50_Q49VI1, UniRef:UniRef90_A0A2A1K4Z1 contig_1 cds 1982791 1983438 - GCA012955505_02322 mntR Manganese transport regulator COG:COG1321, COG:K, RefSeq:WP_011276522.1, SO:0001217, UniParc:UPI000054BE31, UniRef:UniRef100_A0A2A1KA82, UniRef:UniRef50_Q5HRA0, UniRef:UniRef90_A0A380G1E8 contig_1 cds 1983611 1985653 - GCA012955505_02323 nhaP Cation/H+ exchanger transmembrane domain-containing protein COG:COG0025, COG:P, KEGG:K24163, RefSeq:WP_011276523.1, SO:0001217, UniParc:UPI000054BE32, UniRef:UniRef100_Q4L455, UniRef:UniRef50_Q2FVI0, UniRef:UniRef90_Q4L455 contig_1 cds 1986033 1987274 + GCA012955505_02324 argE putative succinyl-diaminopimelate desuccinylase COG:COG0624, COG:E, RefSeq:WP_011276525.1, SO:0001217, UniParc:UPI000054BE34, UniRef:UniRef100_A0A7Z1N1I5, UniRef:UniRef50_B9DIC5, UniRef:UniRef90_A0A7Z1N1I5 contig_1 cds 1987373 1987612 + GCA012955505_02325 DUF3923 domain-containing protein RefSeq:WP_011276526.1, SO:0001217, UniParc:UPI000054BE35, UniRef:UniRef100_A0A7Z1MZA2, UniRef:UniRef50_A0A1S2MLQ3, UniRef:UniRef90_A0A2J8BEW8 contig_1 cds 1987958 1988347 + GCA012955505_02326 hypothetical protein SO:0001217, UniParc:UPI000054BE36, UniRef:UniRef100_Q4L450, UniRef:UniRef50_Q4L450, UniRef:UniRef90_Q4L450 contig_1 cds 1988412 1988894 - GCA012955505_02327 mnhG2 Na+/H+ antiporter subunit G COG:COG1320, COG:P, GO:0005886, GO:0015385, SO:0001217, UniRef:UniRef50_Q49VH5, UniRef:UniRef90_Q4L449 contig_1 cds 1988891 1989187 - GCA012955505_02328 mnhF2 Na+/H+ antiporter Mnh2 subunit F BlastRules:WP_000616642, COG:COG2212, COG:P, GO:0005886, GO:0015385, SO:0001217, UniRef:UniRef50_P0C948, UniRef:UniRef90_Q4L448 contig_1 cds 1989184 1989666 - GCA012955505_02329 mnhE2 Na+/H+ antiporter Mnh2 subunit E BlastRules:WP_001071973, COG:COG1863, COG:P, GO:0005886, GO:0008324, GO:0015297, SO:0001217, UniRef:UniRef50_Q2G210, UniRef:UniRef90_Q4L447 contig_1 cds 1989663 1991162 - GCA012955505_02330 mnhD2 Na+/H+ antiporter Mnh2 subunit D BlastRules:WP_000950548, COG:COG0651, COG:CP, GO:0005886, GO:0008137, GO:0015297, GO:0042773, RefSeq:WP_011276531.1, SO:0001217, UniParc:UPI000054BE3A, UniRef:UniRef100_Q4L446, UniRef:UniRef50_Q0Q2J7, UniRef:UniRef90_Q4L446 contig_1 cds 1991152 1991502 - GCA012955505_02331 mnhC2 Na+/H+ antiporter Mnh2 subunit C BlastRules:WP_001048985, COG:COG1006, COG:P, GO:0005886, GO:0006811, GO:0015297, RefSeq:WP_011276532.1, SO:0001217, UniParc:UPI000054BE3B, UniRef:UniRef100_Q4L445, UniRef:UniRef50_Q2G213, UniRef:UniRef90_Q4L445 contig_1 cds 1991499 1991924 - GCA012955505_02332 mnhB2 Na+/H+ antiporter Mnh2 subunit B BlastRules:WP_000661906, COG:COG2111, COG:P, GO:0005886, GO:0006811, GO:0015297, RefSeq:WP_011276533.1, SO:0001217, UniParc:UPI000054BE3C, UniRef:UniRef100_Q4L444, UniRef:UniRef50_Q49VH0, UniRef:UniRef90_Q4L444 contig_1 cds 1991911 1994313 - GCA012955505_02333 mnhA2 DUF4040 domain-containing protein COG:COG2111, COG:P, GO:0005886, GO:0006811, GO:0015297, RefSeq:WP_011276534.1, SO:0001217, UniParc:UPI000054BE3D, UniRef:UniRef100_Q4L443, UniRef:UniRef50_Q2G2U8, UniRef:UniRef90_Q4L443 contig_1 cds 1994342 1994899 - GCA012955505_02334 xerD Integrase COG:COG4974, COG:L, RefSeq:WP_011276535.1, SO:0001217, UniParc:UPI000054BE3E, UniRef:UniRef100_A0A2A1K7J2, UniRef:UniRef50_S2XMX6, UniRef:UniRef90_A0A2A1K7J2 contig_1 cds 1995004 1995210 + GCA012955505_02335 DUF1659 domain-containing protein RefSeq:WP_011276536.1, SO:0001217, UniParc:UPI000054BE3F, UniRef:UniRef100_A0A2A1K600, UniRef:UniRef50_A0A2A1K600, UniRef:UniRef90_A0A2A1K600 contig_1 cds 1995245 1995466 + GCA012955505_02336 DUF2922 domain-containing protein RefSeq:WP_049426484.1, SO:0001217, UniParc:UPI00066CB6DF, UniRef:UniRef100_UPI00066CB6DF, UniRef:UniRef50_A0A2A1K953, UniRef:UniRef90_A0A2A1K953 contig_1 cds 1995768 1996694 + GCA012955505_02337 ydcZ EamA-like transporter family protein COG:COG3238, COG:S, KEGG:K09936, RefSeq:WP_011276538.1, SO:0001217, UniParc:UPI000054BE41, UniRef:UniRef100_A0A2A1K9Q6, UniRef:UniRef50_Q2G2U7, UniRef:UniRef90_A0A2J8BEV3 contig_1 cds 1996862 1997554 + GCA012955505_02338 hlyD HlyD family secretion protein SO:0001217, UniRef:UniRef50_UPI001F0B6F93, UniRef:UniRef90_UPI001F0B6F93 contig_1 cds 1997520 1997711 + GCA012955505_02339 hypothetical protein contig_1 cds 1997949 1998275 + GCA012955505_02340 hypothetical protein PFAM:PF22381.2 contig_1 cds 1998434 1998679 - GCA012955505_02341 Transposase for ISSha1 SO:0001217, UniRef:UniRef50_Q4L8F7, UniRef:UniRef90_Q4L8F7 contig_1 cds 1998796 1999605 - GCA012955505_02342 menH AB hydrolase-1 domain-containing protein COG:COG0596, COG:HR, RefSeq:WP_016930891.1, SO:0001217, UniParc:UPI000311A2A3, UniRef:UniRef100_A0A2A1K5U3, UniRef:UniRef50_Q2G0F0, UniRef:UniRef90_Q4L435 contig_1 cds 1999851 2000507 - GCA012955505_02343 DUF1129 domain-containing protein SO:0001217, UniRef:UniRef50_Q5HRC1, UniRef:UniRef90_A0A2A1KAZ9 contig_1 cds 2000713 2001219 - GCA012955505_02344 SA0570 family protein RefSeq:WP_016930889.1, SO:0001217, UniParc:UPI000314E93B, UniRef:UniRef100_A0A2A1K8E4, UniRef:UniRef50_Q49VF9, UniRef:UniRef90_A0A2A1K8E4 contig_1 cds 2001287 2001520 - GCA012955505_02345 hypothetical protein contig_1 cds 2001556 2002077 - GCA012955505_02346 menH (pseudo) Alpha/beta hydrolase COG:COG0596, COG:HR, SO:0001217, UniRef:UniRef50_A0A4V6Z249, UniRef:UniRef90_A0A2A1K870 contig_1 cds 2002079 2002303 - GCA012955505_02347 L-2-haloalkanoic acid dehalogenase SO:0001217, UniRef:UniRef50_A0A380EGR3 contig_1 cds 2002339 2002776 - GCA012955505_02348 yigB (pseudo) L-2-haloalkanoic acid dehalogenase COG:COG1011, COG:H, SO:0001217, UniRef:UniRef50_A0A380G976, UniRef:UniRef90_A0A380G412 contig_1 cds 2002878 2002994 - GCA012955505_02349 (pseudo) iron chelate uptake ABC transporter family permease subunit SO:0001217, UniRef:UniRef50_UPI00190C639E, UniRef:UniRef90_UPI00190C639E contig_1 cds 2002991 2003722 - GCA012955505_02350 (pseudo) iron ABC transporter permease SO:0001217, UniRef:UniRef50_A0A1D4I031, UniRef:UniRef90_UPI00194DEF60 contig_1 cds 2004075 2004239 - GCA012955505_02351 hypothetical protein contig_1 cds 2004202 2004411 - GCA012955505_02352 hypothetical protein contig_1 ncRNA 2004696 2004922 - GCA012955505_02353 tsr24 S. aureus tsr24 small RNA RFAM:RF02577, SO:0000655 contig_1 cds 2004994 2005491 - GCA012955505_02354 yhaH DUF805 domain-containing protein COG:COG3152, COG:S, RefSeq:WP_049426454.1, SO:0001217, UniParc:UPI00066D03E8, UniRef:UniRef100_UPI00066D03E8, UniRef:UniRef50_Q4L428, UniRef:UniRef90_Q4L428 contig_1 cds 2005557 2005694 - GCA012955505_02355 hypothetical protein PFAM:PF07739.18 contig_1 cds 2005694 2006284 - GCA012955505_02356 merR MerR family transcriptional regulator SO:0001217, UniRef:UniRef50_A0A380G3B0 contig_1 cds 2006811 2007008 - GCA012955505_02357 hypothetical protein contig_1 cds 2007093 2008754 - GCA012955505_02358 argS arginine--tRNA ligase COG:COG0018, COG:J, EC:6.1.1.19, GO:0004814, GO:0005524, GO:0005737, GO:0006420, KEGG:K01887, RefSeq:WP_037538121.1, SO:0001217, UniParc:UPI00051D7A01, UniRef:UniRef100_UPI00051D7A01, UniRef:UniRef50_P46906, UniRef:UniRef90_Q8CTN9 contig_1 cds 2008751 2009167 - GCA012955505_02359 ywiB DUF1934 domain-containing protein COG:COG4506, COG:S, RefSeq:WP_037538123.1, SO:0001217, UniParc:UPI00051DD823, UniRef:UniRef100_A0A2A1KAZ1, UniRef:UniRef50_A0A0D0SIW2, UniRef:UniRef90_Q4L424 contig_1 ncRNA 2009501 2009592 - GCA012955505_02360 fstAT Fst antitoxin sRNA RFAM:RF01797, SO:0000655 contig_1 cds 2010464 2010697 - GCA012955505_02361 hypothetical protein SO:0001217, UniRef:UniRef50_UPI000D1CD7D0 contig_1 cds 2010730 2010999 - GCA012955505_02362 (pseudo) DUF5079 domain-containing protein SO:0001217, UniRef:UniRef50_UPI00190A1C2D, UniRef:UniRef90_UPI00190A1C2D contig_1 cds 2011186 2012685 + GCA012955505_02363 lqo L-lactate dehydrogenase (quinone) COG:COG0579, COG:G, EC:1.1.5.-, EC:1.1.5.4, KEGG:K00116, RefSeq:WP_016930876.1, SO:0001217, UniParc:UPI00030C0CB0, UniRef:UniRef100_UPI00069E4D80, UniRef:UniRef50_O69282, UniRef:UniRef90_A0A6N3FJD9 contig_1 ncRNA 2013144 2013241 - GCA012955505_02364 fstAT Fst antitoxin sRNA RFAM:RF01797, SO:0000655 contig_1 cds 2013491 2014312 - GCA012955505_02365 lysR LysR family regulatory protein RefSeq:WP_016930873.1, SO:0001217, UniParc:UPI0002E48ACB, UniRef:UniRef100_UPI0002E48ACB, UniRef:UniRef50_O33812, UniRef:UniRef90_A0A380HRC2 contig_1 cds 2014437 2015432 + GCA012955505_02366 Sulfate exporter family transporter RefSeq:WP_016930872.1, SO:0001217, UniParc:UPI0002F34627, UniRef:UniRef100_A0A2A1K933, UniRef:UniRef50_Q5HRT2, UniRef:UniRef90_A0A2R4A9A8 contig_1 cds 2015706 2016317 + GCA012955505_02367 spoIVCA Transposon DNA-invertase COG:COG1961, COG:L, RefSeq:WP_000635275.1, SO:0001217, UniParc:UPI00000E4C2C, UniRef:UniRef100_A0A1B1UY74, UniRef:UniRef50_P20384, UniRef:UniRef90_A0A1B1UY74 contig_1 cds 2016467 2016691 - GCA012955505_02368 yitT YitT family protein SO:0001217, UniRef:UniRef50_UPI002A370C92 contig_1 cds 2016688 2017311 - GCA012955505_02369 yitT YitT family protein SO:0001217, UniRef:UniRef50_UPI0019095A1B, UniRef:UniRef90_UPI000F87F9C2 contig_1 cds 2017525 2018499 - GCA012955505_02370 gamma-glutamyltransferase SO:0001217, UniRef:UniRef50_A0A380FL71, UniRef:UniRef90_UPI0027F2F291 contig_1 cds 2018680 2018907 + GCA012955505_02371 hypothetical protein contig_1 cds 2019286 2019792 - GCA012955505_02372 Cytosolic protein RefSeq:WP_011276582.1, SO:0001217, UniParc:UPI000054BE6D, UniRef:UniRef100_A0A2A1K5U8, UniRef:UniRef50_P70996, UniRef:UniRef90_A0A2A1K5U8 contig_1 cds 2019863 2021149 - GCA012955505_02373 ydhJ HD domain-containing protein COG:COG1078, COG:R, SO:0001217, UniRef:UniRef50_P39651, UniRef:UniRef90_Q4L3Z1 contig_1 cds 2021187 2021663 - GCA012955505_02374 rimI N-acetyltransferase domain-containing protein COG:COG0456, COG:J, RefSeq:WP_016930869.1, SO:0001217, UniParc:UPI0002E100CF, UniRef:UniRef100_A0A2A1K9M4, UniRef:UniRef50_Q2G0G4, UniRef:UniRef90_Q4L3Z0 contig_1 cds 2021779 2022315 - GCA012955505_02375 wrbA FMN-dependent NADPH-azoreductase COG:C, COG:COG0655, RefSeq:WP_016930868.1, SO:0001217, UniParc:UPI00031CF36D, UniRef:UniRef100_UPI00031CF36D, UniRef:UniRef50_A0A7U7PXP0, UniRef:UniRef90_Q4L3Y9 contig_1 cds 2022515 2023450 - GCA012955505_02376 pdxI NADP-dependent oxidoreductase domain-containing protein COG:COG0667, COG:HR, RefSeq:WP_016930867.1, SO:0001217, UniParc:UPI0003000E9A, UniRef:UniRef100_UPI0003000E9A, UniRef:UniRef50_Q2G0G6, UniRef:UniRef90_Q4L3Y8 contig_1 cds 2023580 2024020 + GCA012955505_02377 hypR redox-sensitive transcriptional regulator HypR COG:COG1959, COG:K, RefSeq:WP_016930866.1, SO:0001217, UniParc:UPI0002F2C140, UniRef:UniRef100_UPI0002F2C140, UniRef:UniRef50_Q2G0I3, UniRef:UniRef90_Q4L3Y7 contig_1 cds 2024007 2025329 + GCA012955505_02378 merA hypothiocyanous acid reductase MerA COG:C, COG:COG1249, GO:0016668, GO:0050660, KEGG:K21739, RefSeq:WP_016930865.1, SO:0001217, UniParc:UPI00030EDAEB, UniRef:UniRef100_UPI00030EDAEB, UniRef:UniRef50_A0A266CGC0, UniRef:UniRef90_A0A7Z1N643 contig_1 cds 2025462 2025665 + GCA012955505_02379 cspA Cold shock protein CspA COG:COG1278, COG:K, KEGG:K03704, RefSeq:WP_011276653.1, SO:0001217, UniParc:UPI000054BEB4, UniRef:UniRef100_A0A7Z1N5T7, UniRef:UniRef50_Q5HQT1, UniRef:UniRef90_A0A7Z1N5T7 contig_1 cds 2025796 2026137 - GCA012955505_02380 yuzB UPF0741 protein SH2399 COG:COG4844, COG:S, RefSeq:WP_011276654.1, SO:0001217, UniParc:UPI000054BEB5, UniRef:UniRef100_Q4L3R9, UniRef:UniRef50_Q2G0I5, UniRef:UniRef90_Q8CTP9 contig_1 cds 2026345 2027421 - GCA012955505_02381 eRG12 phosphomevalonate kinase COG:COG1577, COG:I, EC:2.7.4.2, GO:0004631, GO:0016126, GO:0019287, KEGG:K00938, RefSeq:WP_016930864.1, SO:0001217, UniParc:UPI0002E77B6B, UniRef:UniRef100_A0A2A1K9J4, UniRef:UniRef50_B9DKS0, UniRef:UniRef90_Q4L3R8 contig_1 cds 2027434 2028417 - GCA012955505_02382 mvaD diphosphomevalonate decarboxylase COG:COG3407, COG:I, EC:4.1.1.33, GO:0004163, GO:0005829, GO:0019287, KEGG:K01597, RefSeq:WP_048668185.1, SO:0001217, UniParc:UPI000660CF4B, UniRef:UniRef100_UPI000660CF4B, UniRef:UniRef50_Q9FD68, UniRef:UniRef90_A0A7T8ZN69 contig_1 cds 2028422 2028952 - GCA012955505_02383 mevalonate kinase SO:0001217, UniRef:UniRef50_A0A380DIB3 contig_1 cds 2028927 2029337 - GCA012955505_02384 mvk (pseudo) mevalonate kinase COG:COG1577, COG:I, EC:2.7.1.36, GO:0004496, GO:0005524, GO:0005737, GO:0016126, GO:0019287, KEGG:K00869, SO:0001217, UniRef:UniRef50_A0A2K4AEE5, UniRef:UniRef90_Q9FD79 contig_1 ncRNA 2029561 2029846 + GCA012955505_02385 S35 Staphylococcus sRNA 35 (srn_0335) RFAM:RF02894, SO:0000655 contig_1 cds 2029900 2030742 - GCA012955505_02386 lplA Octanoyl-[GcvH]:protein N-octanoyltransferase COG:COG0095, COG:H, EC:2.3.1.204, KEGG:K16869, RefSeq:WP_016930863.1, SO:0001217, UniParc:UPI0002E474DD, UniRef:UniRef100_A0A2A1K768, UniRef:UniRef50_Q2G0I9, UniRef:UniRef90_A0A2A1K768 contig_1 cds 2030742 2031707 - GCA012955505_02387 pta phosphate acetyltransferase COG:C, COG:COG0280, EC:2.3.1.8, GO:0006086, GO:0008959, SO:0001217, UniRef:UniRef50_P39646, UniRef:UniRef90_A0A3S7GXX1 contig_1 cds 2031877 2032113 + GCA012955505_02388 hypothetical protein contig_1 cds 2032110 2032625 + GCA012955505_02389 Heme peroxidase SO:0001217, UniRef:UniRef50_A0A0B6ADJ8 contig_1 ncRNA 2032797 2032930 - GCA012955505_02390 rsaA RNA Staph. aureus A RFAM:RF01816, SO:0000655 contig_1 cds 2033214 2034062 + GCA012955505_02391 Threonine/serine exporter-like N-terminal domain-containing protein SO:0001217, UniRef:UniRef50_Q49VD8, UniRef:UniRef90_A0A7Z1SD69 contig_1 cds 2034075 2034527 + GCA012955505_02392 yjjB Threonine/Serine exporter ThrE domain-containing protein COG:C, COG:COG3610, RefSeq:WP_011276662.1, SO:0001217, UniParc:UPI000054BEBC, UniRef:UniRef100_A0A2A1K8U8, UniRef:UniRef50_Q2G0J3, UniRef:UniRef90_A0A974QMJ8 contig_1 cds 2034598 2036076 - GCA012955505_02393 potE APC family permease COG:COG0531, COG:E, RefSeq:WP_033079583.1, SO:0001217, UniParc:UPI0004486804, UniRef:UniRef100_A0A2A1K744, UniRef:UniRef50_Q2G0J4, UniRef:UniRef90_Q4L3R0 contig_1 cds 2036203 2036580 - GCA012955505_02394 ygdD UPF0382 membrane protein SH2409 COG:COG2363, COG:S, GO:0005886, SO:0001217, UniRef:UniRef50_Q5HRG3, UniRef:UniRef90_Q4L3Q9 contig_1 cds 2036599 2036982 - GCA012955505_02395 ywdI YwdI family protein RefSeq:WP_033079581.1, SO:0001217, UniParc:UPI000452EC80, UniRef:UniRef100_UPI000452EC80, UniRef:UniRef50_B9DKT4, UniRef:UniRef90_A0A2J9WZH6 contig_1 cds 2036983 2037573 - GCA012955505_02396 ung uracil-DNA glycosylase COG:COG0692, COG:L, EC:3.2.2.27, GO:0004844, GO:0005737, GO:0006284, GO:0097510, KEGG:K03648, SO:0001217, UniRef:UniRef50_Q4L3Q7, UniRef:UniRef90_Q4L3Q7 contig_1 cds 2037737 2038186 + GCA012955505_02397 pdxK (pseudo) Putative pyridoxine kinase COG:COG0351, COG:H, EC:2.7.1.35, GO:0005524, GO:0005829, GO:0008478, GO:0008902, GO:0008972, GO:0009228, GO:0046872, SO:0001217, UniRef:UniRef50_Q8CTQ7, UniRef:UniRef90_Q5HI96 contig_1 cds 2038206 2038565 + GCA012955505_02398 pfkB PfkB family carbohydrate kinase SO:0001217, UniRef:UniRef50_UPI00168BD442, UniRef:UniRef90_UPI00155282FA contig_1 cds 2039804 2040082 - GCA012955505_02399 Phage protein RefSeq:WP_002488040.1, SO:0001217, UniParc:UPI00024E1ABA, UniRef:UniRef100_A0A3S7GTU0, UniRef:UniRef50_A0A380G2P5, UniRef:UniRef90_A0A3S7GTU0 contig_1 cds 2040072 2040452 - GCA012955505_02400 vraC Protein VraC RefSeq:WP_016931405.1, SO:0001217, UniParc:UPI000371999F, UniRef:UniRef100_UPI001C5C9BF7, UniRef:UniRef50_A0A6N0I362, UniRef:UniRef90_A0A6N0I362 contig_1 cds 2040421 2041569 - GCA012955505_02401 vraB Putative acetyl-CoA C-acetyltransferase VraB SO:0001217, UniRef:UniRef50_Q7A2W9, UniRef:UniRef90_A0A3S7GXX8 contig_1 cds 2041566 2042948 - GCA012955505_02402 vraA Putative long chain fatty acid-CoA ligase VraA RefSeq:WP_048668189.1, SO:0001217, UniParc:UPI000660FE88, UniRef:UniRef100_UPI000660FE88, UniRef:UniRef50_Q4L3Q0, UniRef:UniRef90_A0A3S7GU34 contig_1 cds 2043067 2043615 - GCA012955505_02403 6-phospho-3-hexuloisomerase EC:5.3.1.27, KEGG:K08094, RefSeq:WP_016931408.1, SO:0001217, UniParc:UPI0002D5A020, UniRef:UniRef100_UPI000B2E0E58, UniRef:UniRef50_A0A380G9B8, UniRef:UniRef90_A0A3S7GU45 contig_1 cds 2043617 2044084 - GCA012955505_02404 3-hexulose-6-phosphate synthase SO:0001217, UniRef:UniRef50_A0A177KTM2, UniRef:UniRef90_UPI000452F8B4 contig_1 cds 2044106 2044207 - GCA012955505_02405 hypothetical protein contig_1 cds 2044399 2044761 + GCA012955505_02406 DUF1806 domain-containing protein RefSeq:WP_002488035.1, SO:0001217, UniParc:UPI00024E1ABE, UniRef:UniRef100_A0A8X8GIB5, UniRef:UniRef50_A0A7U7JT15, UniRef:UniRef90_A0A2A1K988 contig_1 cds 2044775 2045440 + GCA012955505_02407 bshB2 bacillithiol biosynthesis deacetylase BshB2 COG:COG2120, COG:G, EC:3.5.1.-, GO:0019213, KEGG:K22135, RefSeq:WP_016931409.1, SO:0001217, UniParc:UPI000309EE7F, UniRef:UniRef100_UPI00224607D9, UniRef:UniRef50_A0A8J4SJ37, UniRef:UniRef90_Q4L3P6 contig_1 cds 2045468 2046346 + GCA012955505_02408 folE2 GTP cyclohydrolase FolE2 COG:COG1469, COG:H, EC:3.5.4.16, GO:0003933, GO:0003934, GO:0046654, KEGG:K09007, RefSeq:WP_119882013.1, SO:0001217, UniParc:UPI000E70C0B5, UniRef:UniRef100_UPI0034D4C277, UniRef:UniRef50_Q2G0L1, UniRef:UniRef90_Q4L3P5 contig_1 cds 2046822 2047325 - GCA012955505_02409 hypothetical protein contig_1 cds 2047392 2048264 - GCA012955505_02410 E domain-containing protein KEGG:K14195, SO:0001217, UniRef:UniRef50_UPI0037AA6139, UniRef:UniRef90_UPI0026716CCB contig_1 cds 2048257 2049132 - GCA012955505_02411 lectin-like domain-containing protein SO:0001217, UniRef:UniRef50_UPI0023B8BDFD contig_1 cds 2049261 2050091 - GCA012955505_02412 hypothetical protein PFAM:PF04650.22 contig_1 cds 2050543 2050872 - GCA012955505_02413 HAD family hydrolase SO:0001217, UniRef:UniRef50_UPI00053B081B contig_1 cds 2050983 2051453 - GCA012955505_02414 tadA tRNA adenosine(34) deaminase TadA COG:COG0590, COG:J, EC:3.5.4.33, GO:0002100, GO:0008251, GO:0008270, SO:0001217, UniRef:UniRef50_A0A0D0QYW1, UniRef:UniRef90_Q4L3N4 contig_1 cds 2051517 2052134 + GCA012955505_02415 dck Deoxynucleoside kinase COG:COG1428, COG:F, EC:2.7.1.113, KEGG:K15518, RefSeq:WP_011276689.1, SO:0001217, UniParc:UPI000054BED7, UniRef:UniRef100_A0A2A1K866, UniRef:UniRef50_A0A380GAH5, UniRef:UniRef90_A0A2A1K866 contig_1 cds 2052127 2052789 + GCA012955505_02416 dck Deoxypurine kinase COG:COG1428, COG:F, RefSeq:WP_011276690.1, SO:0001217, UniParc:UPI000054BED8, UniRef:UniRef100_A0A2A1K6D3, UniRef:UniRef50_P37529, UniRef:UniRef90_A0A4U9TH76 contig_1 cds 2052848 2053549 - GCA012955505_02417 gph HAD family hydrolase COG:C, COG:COG0546, RefSeq:WP_011276691.1, SO:0001217, UniParc:UPI000054BED9, UniRef:UniRef100_Q4L3N1, UniRef:UniRef50_A0A0D0RQV1, UniRef:UniRef90_Q4L3N1 contig_1 cds 2053817 2053909 - GCA012955505_02418 hypothetical protein contig_1 cds 2054424 2054696 - GCA012955505_02419 hypothetical protein contig_1 cds 2054915 2055211 - GCA012955505_02420 hypothetical protein RefSeq:WP_011276695.1, SO:0001217, UniParc:UPI000054BEDD, UniRef:UniRef100_Q4L3M7, UniRef:UniRef50_Q4L3M7, UniRef:UniRef90_Q4L3M7 contig_1 cds 2055776 2056021 - GCA012955505_02421 hypothetical protein contig_1 cds 2056870 2057949 - GCA012955505_02422 ilvE branched-chain amino acid aminotransferase COG:COG0115, COG:EH, EC:2.6.1.42, GO:0004084, GO:0009081, SO:0001217, UniRef:UniRef50_Q8CQ78, UniRef:UniRef90_Q4L3L9 contig_1 cds 2058194 2059150 - GCA012955505_02423 wcaG putative epimerase/dehydratase SH2450 COG:COG0451, COG:M, GO:0006567, GO:0008743, RefSeq:WP_011276704.1, SO:0001217, UniParc:UPI000054BEE6, UniRef:UniRef100_Q4L3L8, UniRef:UniRef50_Q2G0M5, UniRef:UniRef90_Q4L3L8 contig_1 cds 2059171 2061270 + GCA012955505_02424 Bifunctional metallophosphatase/5'-nucleotidase SO:0001217, UniRef:UniRef50_A0A5F0TXV0 contig_1 cds 2061476 2062423 - GCA012955505_02425 oCDMu ornithine cyclodeaminase family protein COG:COG2423, COG:E, SO:0001217, UniRef:UniRef50_A0A653YM52, UniRef:UniRef90_Q4L3L5 contig_1 cds 2062720 2063139 - GCA012955505_02426 yjhB Nudix hydrolase domain-containing protein COG:COG1051, COG:F, RefSeq:WP_037559503.1, SO:0001217, UniParc:UPI00044F39D1, UniRef:UniRef100_A0A2A1K8S4, UniRef:UniRef50_G5JLP4, UniRef:UniRef90_Q4L3L3 contig_1 cds 2063151 2063660 - GCA012955505_02427 GNAT family N-acetyltransferase SO:0001217, UniRef:UniRef50_A0A0H2VEP8, UniRef:UniRef90_A0A2A1K8K1 contig_1 cds 2063724 2063840 - GCA012955505_02428 hypothetical protein contig_1 cds 2063873 2065063 - GCA012955505_02429 bioF glycine C-acetyltransferase COG:COG0156, COG:H, EC:2.3.1.-, EC:2.3.1.29, GO:0008890, GO:0009058, GO:0016740, GO:0030170, RefSeq:WP_033079549.1, SO:0001217, UniParc:UPI000452F3E8, UniRef:UniRef100_A0A2A1K7W5, UniRef:UniRef50_Q73KM3, UniRef:UniRef90_P60121 contig_1 cds 2065290 2066465 + GCA012955505_02430 N-acetyl-L,L-diaminopimelate deacetylase SO:0001217, UniRef:UniRef50_A0A2I7Y808, UniRef:UniRef90_A0A380G239 contig_1 cds 2066633 2067817 - GCA012955505_02431 tuf elongation factor Tu COG:COG0050, COG:J, GO:0003746, GO:0003924, GO:0005525, GO:0005829, GO:0006414, RefSeq:WP_011276713.1, SO:0001217, UniParc:UPI000054BEEF, UniRef:UniRef100_Q4L3K9, UniRef:UniRef50_A6GYU7, UniRef:UniRef90_Q4L3K9 contig_1 cds 2068022 2070103 - GCA012955505_02432 fusA elongation factor G COG:COG0480, COG:J, GO:0003746, GO:0003924, GO:0005525, GO:0005737, GO:0006414, GO:0032790, KEGG:K02355, RefSeq:WP_011276714.1, SO:0001217, UniParc:UPI000054BEF0, UniRef:UniRef100_Q4L3K8, UniRef:UniRef50_Q9SI75, UniRef:UniRef90_Q2G0N1 contig_1 cds 2070225 2070695 - GCA012955505_02433 rpsG 30S ribosomal protein S7 COG:COG0049, COG:J, GO:0000049, GO:0003735, GO:0006412, GO:0015935, GO:0019843, KEGG:K02992, RefSeq:WP_001137495.1, SO:0001217, UniParc:UPI000004801A, UniRef:UniRef100_P48940, UniRef:UniRef50_P02359, UniRef:UniRef90_P48940 contig_1 cds 2070766 2071179 - GCA012955505_02434 rpsL 30S ribosomal protein S12 COG:COG0048, COG:J, GO:0000049, GO:0003735, GO:0006412, GO:0015935, GO:0019843, KEGG:K02950, RefSeq:WP_016931318.1, SO:0001217, UniParc:UPI00031CA07F, UniRef:UniRef100_A0A2A1K849, UniRef:UniRef50_P0A0H0, UniRef:UniRef90_P0A0H0 contig_1 cds 2071269 2071529 - GCA012955505_02435 rpl7Ae Ribosomal protein L7Ae-like COG:COG1358, COG:J, KEGG:K07590, RefSeq:WP_011276716.1, SO:0001217, UniParc:UPI000054BEF2, UniRef:UniRef100_A0A2S6DQ26, UniRef:UniRef50_P0A0G6, UniRef:UniRef90_A0A380G417 contig_1 cds 2071727 2075347 - GCA012955505_02436 rpoC DNA-directed RNA polymerase subunit beta' COG:COG0086, COG:K, EC:2.7.7.6, GO:0000287, GO:0000428, GO:0001054, GO:0001055, GO:0001056, GO:0001057, GO:0001058, GO:0001066, GO:0003677, GO:0003899, GO:0006351, GO:0008270, KEGG:K03046, SO:0001217, UniParc:UPI000054BEF3, UniRef:UniRef100_Q4L3K4, UniRef:UniRef50_P37871, UniRef:UniRef90_Q2G0N5 contig_1 cds 2075518 2079069 - GCA012955505_02437 rpoB DNA-directed RNA polymerase subunit beta COG:COG0085, COG:K, EC:2.7.7.6, GO:0000428, GO:0001054, GO:0001055, GO:0001056, GO:0001057, GO:0001058, GO:0001066, GO:0003677, GO:0003899, GO:0006351, GO:0032549, KEGG:K03043, RefSeq:WP_011276718.1, SO:0001217, UniParc:UPI000054BEF4, UniRef:UniRef100_Q4L3K3, UniRef:UniRef50_P47768, UniRef:UniRef90_P47768 contig_1 cds 2079276 2079884 - GCA012955505_02438 rsmC Class I SAM-dependent methyltransferase COG:COG2813, COG:J, RefSeq:WP_011276719.1, SO:0001217, UniParc:UPI000054BEF5, UniRef:UniRef100_A0A7Z1MZP9, UniRef:UniRef50_A0A556PLC6, UniRef:UniRef90_A0A7Z1MZP9 contig_1 cds 2080057 2080425 - GCA012955505_02439 rplL 50S ribosomal protein L7/L12 COG:COG0222, COG:J, GO:0003729, GO:0003735, GO:0005840, GO:0006412, GO:0022625, RefSeq:WP_011276720.1, SO:0001217, UniParc:UPI000054BEF6, UniRef:UniRef100_Q4L3K1, UniRef:UniRef50_B2A4C9, UniRef:UniRef90_Q4L3K1 contig_1 cds 2080465 2080965 - GCA012955505_02440 rplJ 50S ribosomal protein L10 COG:COG0244, COG:J, GO:0003735, GO:0006412, GO:0015934, GO:0070180, KEGG:K02864, RefSeq:WP_011276721.1, SO:0001217, UniParc:UPI000054BEF7, UniRef:UniRef100_Q4L3K0, UniRef:UniRef50_P66042, UniRef:UniRef90_Q49V49 contig_1 ncRNA-region 2081004 2081155 - Ribosomal protein L10 leader RFAM:RF00557, SO:0000140 contig_1 cds 2081451 2081933 + GCA012955505_02441 Transposase for ISSha1 SO:0001217, UniRef:UniRef50_Q4L3M1 contig_1 cds 2081993 2082688 - GCA012955505_02442 rplA 50S ribosomal protein L1 COG:COG0081, COG:J, GO:0000049, GO:0003723, GO:0003735, GO:0006412, GO:0006417, GO:0015934, GO:0019843, KEGG:K02863, RefSeq:WP_011276724.1, SO:0001217, UniParc:UPI000054BEFA, UniRef:UniRef100_Q4L3J7, UniRef:UniRef50_Q5M2K0, UniRef:UniRef90_Q2G0P0 contig_1 cds 2082913 2083335 - GCA012955505_02443 rplK 50S ribosomal protein L11 COG:COG0080, COG:J, GO:0003735, GO:0005840, GO:0006412, GO:0022625, GO:0070180, KEGG:K02867, RefSeq:WP_001832298.1, SO:0001217, UniParc:UPI00000E4CEE, UniRef:UniRef100_Q5HRL5, UniRef:UniRef50_P0A0F4, UniRef:UniRef90_P0A0F4 contig_1 cds 2083523 2084071 - GCA012955505_02444 nusG transcription termination/antitermination protein NusG COG:COG0250, COG:K, GO:0005829, GO:0006353, GO:0031564, GO:0032784, GO:0140673, RefSeq:WP_016931333.1, SO:0001217, UniParc:UPI00030150B2, UniRef:UniRef100_A0A2A1KAE1, UniRef:UniRef50_Q2G0P2, UniRef:UniRef90_Q2G0P2 contig_1 cds 2084089 2084289 - GCA012955505_02445 secE preprotein translocase subunit SecE COG:COG0690, COG:U, GO:0005886, GO:0009306, GO:0015450, GO:0043952, RefSeq:WP_011276726.1, SO:0001217, UniParc:UPI000054BEFC, UniRef:UniRef100_A0A2A1K7S3, UniRef:UniRef50_P0A0I4, UniRef:UniRef90_A0A380G1R6 contig_1 cds 2084590 2084913 - GCA012955505_02446 luxR LuxR C-terminal-related transcriptional regulator SO:0001217, UniRef:UniRef50_UPI001FD69E2C, UniRef:UniRef90_UPI001FD69E2C contig_1 cds 2084982 2085164 - GCA012955505_02447 (pseudo) sigma factor SO:0001217, UniRef:UniRef50_UPI00314558CB, UniRef:UniRef90_UPI00314558CB contig_1 cds 2085235 2085762 - GCA012955505_02448 rae1 NYN domain-containing protein COG:COG3688, COG:J, KEGG:K06962, RefSeq:WP_011276728.1, SO:0001217, UniParc:UPI000054BEFE, UniRef:UniRef100_A0A2A1K560, UniRef:UniRef50_Q49V42, UniRef:UniRef90_A0A2K0A577 contig_1 cds 2085759 2086517 - GCA012955505_02449 rlmB 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB COG:COG0566, COG:J, EC:2.1.1.-, GO:0003723, GO:0005829, GO:0006396, GO:0008173, GO:0032259, SO:0001217, UniRef:UniRef50_Q49V41, UniRef:UniRef90_Q4L3J1 contig_1 cds 2086517 2086927 - GCA012955505_02450 mrnC Mini-ribonuclease 3 COG:COG1939, COG:J, SO:0001217, UniRef:UniRef50_Q2G2M4, UniRef:UniRef90_A0A0M2NS12 contig_1 cds 2086905 2088305 - GCA012955505_02451 cysS cysteine--tRNA ligase COG:COG0215, COG:J, EC:6.1.1.16, GO:0004817, GO:0005524, GO:0005737, GO:0005829, GO:0006423, GO:0008270, RefSeq:WP_011276731.1, SO:0001217, UniParc:UPI000054BF01, UniRef:UniRef100_Q4L3I9, UniRef:UniRef50_Q06752, UniRef:UniRef90_Q4L3I9 contig_1 cds 2088289 2088930 - GCA012955505_02452 cysE serine O-acetyltransferase COG:COG1045, COG:E, EC:2.3.1.30, GO:0005737, GO:0006535, GO:0009001, SO:0001217, UniParc:UPI000054BF02, UniRef:UniRef100_A0A2A1KAF8, UniRef:UniRef50_A0A938X8R1, UniRef:UniRef90_A0A2A1KAF8 contig_1 cds 2089373 2090827 - GCA012955505_02453 gltX glutamate--tRNA ligase COG:COG0008, COG:J, EC:6.1.1.17, GO:0000049, GO:0000166, GO:0004818, GO:0005524, GO:0005829, GO:0006424, GO:0008270, RefSeq:WP_033079758.1, SO:0001217, UniParc:UPI0004A953EA, UniRef:UniRef100_A0A7T8UVS9, UniRef:UniRef50_Q97NG1, UniRef:UniRef90_Q5HRM5 contig_1 cds 2091136 2091771 - GCA012955505_02454 (pseudo) PIN/TRAM domain-containing protein COG:COG4956, COG:R, SO:0001217, UniRef:UniRef50_A0A9X6AJN5, UniRef:UniRef90_A0A2A1K549 contig_1 cds 2091961 2093307 - GCA012955505_02455 radA DNA repair protein RadA COG:COG1066, COG:L, GO:0003684, GO:0005524, GO:0006281, SO:0001217, UniRef:UniRef50_A5GDK5, UniRef:UniRef90_A0A2A1KAD2 contig_1 cds 2093531 2096005 - GCA012955505_02456 clpC ATP-dependent Clp protease ATP-binding subunit ClpC COG:COG0542, COG:O, GO:0005524, GO:0005737, GO:0016887, GO:0034605, RefSeq:WP_016931338.1, SO:0001217, UniParc:UPI000318FD8C, UniRef:UniRef100_A0A2S6DKX6, UniRef:UniRef50_Q2G0P5, UniRef:UniRef90_Q2G0P5 contig_1 cds 2096021 2097028 - GCA012955505_02457 mcsB protein arginine kinase COG:COG3869, COG:O, EC:2.7.14.1, GO:0004111, GO:0004672, GO:0005524, GO:0005615, GO:0046314, RefSeq:WP_011276737.1, SO:0001217, UniParc:UPI000054BF07, UniRef:UniRef100_Q4L3I3, UniRef:UniRef50_Q2G0P6, UniRef:UniRef90_Q4L3I3 contig_1 cds 2097021 2097584 - GCA012955505_02458 mcsA Excinuclease ABC subunit B COG:COG3880, COG:O, RefSeq:WP_011276738.1, SO:0001217, UniParc:UPI000054BF08, UniRef:UniRef100_A0A2A1K6U0, UniRef:UniRef50_Q2G0P7, UniRef:UniRef90_A0A2A1K6U0 contig_1 cds 2097607 2098068 - GCA012955505_02459 ctsR Transcriptional regulator CtsR COG:COG4463, COG:K, GO:0003677, GO:0006355, RefSeq:WP_011276739.1, SO:0001217, UniParc:UPI000054BF09, UniRef:UniRef100_Q4L3I1, UniRef:UniRef50_Q2G0P8, UniRef:UniRef90_Q2G0P8 contig_1 cds 2098206 2099420 + GCA012955505_02460 nupC NupC/NupG family nucleoside CNT transporter COG:COG1972, COG:F, KEGG:K11535, RefSeq:WP_011276740.1, SO:0001217, UniParc:UPI000054BF0A, UniRef:UniRef100_A0A2A1K8G5, UniRef:UniRef50_P0AFF2, UniRef:UniRef90_A0A2A1K8G5 contig_1 cds 2099525 2100079 - GCA012955505_02461 pdxT pyridoxal 5'-phosphate synthase glutaminase subunit PdxT COG:COG0311, COG:H, EC:3.5.1.2, EC:4.3.3.6, GO:0004359, GO:0005829, GO:0006543, GO:0008614, GO:0016884, GO:0036381, GO:0042823, GO:1903600, KEGG:K08681, RefSeq:WP_011276741.1, SO:0001217, UniParc:UPI000054BF0B, UniRef:UniRef100_Q4L3H9, UniRef:UniRef50_Q2G0Q0, UniRef:UniRef90_Q4L3H9 contig_1 cds 2100083 2100970 - GCA012955505_02462 pdxS pyridoxal 5'-phosphate synthase subunit PdxS BlastRules:WP_003247145, COG:COG0214, COG:H, EC:4.3.3.6, GO:0003824, GO:0006520, GO:0008615, GO:0036381, GO:0042823, KEGG:K06215, RefSeq:WP_011276742.1, SO:0001217, UniParc:UPI000054BF0C, UniRef:UniRef100_Q4L3H8, UniRef:UniRef50_O59905, UniRef:UniRef90_B9DKX7 contig_1 cds 2101072 2102433 + GCA012955505_02463 aRO8 GntR family transcriptional regulator COG:COG1167, COG:KE, KEGG:K00375, RefSeq:WP_011276743.1, SO:0001217, UniParc:UPI000054BF0D, UniRef:UniRef100_A0A2A1K713, UniRef:UniRef50_Q2G0Q2, UniRef:UniRef90_A0A2A1K713 contig_1 cds 2102515 2102871 - GCA012955505_02464 doxX DoxX family protein COG:COG2259, COG:S, RefSeq:WP_016931339.1, SO:0001217, UniParc:UPI00031B8E55, UniRef:UniRef100_A0A2A1K540, UniRef:UniRef50_Q4L3H6, UniRef:UniRef90_Q4L3H6 contig_1 rRNA 2103407 2103521 - GCA012955505_02465 rrf 5S ribosomal RNA GO:0003735, GO:0005840, KEGG:K01985, RFAM:RF00001, SO:0000652 contig_1 tRNA 2103650 2103725 - GCA012955505_02466 trnA tRNA-Ala(tgc) SO:0000254 contig_1 tRNA 2103741 2103814 - GCA012955505_02467 trnP tRNA-Pro(tgg) SO:0000268 contig_1 tRNA 2103848 2103921 - GCA012955505_02468 trnR tRNA-Arg(acg) SO:0001036 contig_1 tRNA 2103933 2104021 - GCA012955505_02469 trnL tRNA-Leu(taa) SO:0000264 contig_1 tRNA 2104029 2104103 - GCA012955505_02470 trnG tRNA-Gly(gcc) SO:0000260 contig_1 tRNA 2104127 2104199 - GCA012955505_02471 trnK tRNA-Lys(ttt) SO:0000265 contig_1 tRNA 2104205 2104280 - GCA012955505_02472 trnT tRNA-Thr(tgt) SO:0000270 contig_1 tRNA 2104295 2104370 - GCA012955505_02473 trnV tRNA-Val(tac) SO:0000273 contig_1 rRNA 2104380 2104494 - GCA012955505_02474 rrf 5S ribosomal RNA GO:0003735, GO:0005840, KEGG:K01985, RFAM:RF00001, SO:0000652 contig_1 cds 2104952 2106442 - GCA012955505_02475 lysS lysine--tRNA ligase COG:COG1190, COG:J, EC:6.1.1.6, GO:0000049, GO:0000287, GO:0004824, GO:0005524, GO:0005737, GO:0005829, GO:0006430, GO:0016740, KEGG:K04567, RefSeq:WP_011276745.1, SO:0001217, UniParc:UPI000054BF0F, UniRef:UniRef100_Q4L3H5, UniRef:UniRef50_Q8YAB8, UniRef:UniRef90_Q4L3H5 contig_1 cds 2106646 2107125 - GCA012955505_02476 folK 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase COG:COG0801, COG:H, EC:2.7.6.3, GO:0003848, GO:0009396, RefSeq:WP_011276746.1, SO:0001217, UniParc:UPI000054BF10, UniRef:UniRef100_A0A2A1K7R8, UniRef:UniRef50_A0A097ATV0, UniRef:UniRef90_A0A2A1K7R8 contig_1 cds 2107155 2107376 - GCA012955505_02477 folB (pseudo) dihydroneopterin aldolase EC:4.1.2.25, GO:0004150, GO:0006760, SO:0001217, UniRef:UniRef50_Q5HRN9, UniRef:UniRef90_UPI002901907F contig_1 cds 2107457 2108269 - GCA012955505_02478 folP dihydropteroate synthase EC:2.5.1.15, GO:0004156, GO:0009396, KEGG:K00796, SO:0001217, UniRef:UniRef50_P64141, UniRef:UniRef90_A0A380G448 contig_1 cds 2108400 2109245 - GCA012955505_02479 cysK cysteine synthase A COG:COG0031, COG:E, EC:2.5.1.47, GO:0004124, GO:0006535, SO:0001217, UniRef:UniRef50_Q5HRP1, UniRef:UniRef90_Q5HRP1 contig_1 cds 2109553 2110437 - GCA012955505_02480 hslO Hsp33 family molecular chaperone HslO COG:COG1281, COG:O, GO:0005737, GO:0006457, GO:0042026, GO:0044183, GO:0051082, KEGG:K04083, RefSeq:WP_011276749.1, SO:0001217, UniParc:UPI000054BF14, UniRef:UniRef100_Q4L3H0, UniRef:UniRef50_P37565, UniRef:UniRef90_Q4L3H0 contig_1 cds 2110674 2112857 - GCA012955505_02481 ftsH ATP-dependent zinc metalloprotease FtsH COG:COG0465, COG:O, EC:3.4.24.-, GO:0004176, GO:0004222, GO:0005524, GO:0005886, GO:0006508, GO:0008270, GO:0016020, GO:0016887, GO:0030163, GO:0051301, RefSeq:WP_011276751.1, SO:0001217, UniParc:UPI000054BF16, UniRef:UniRef100_Q4L3G8, UniRef:UniRef50_Q88Z31, UniRef:UniRef90_Q4L3G8 contig_1 cds 2113120 2113659 - GCA012955505_02482 hpt hypoxanthine phosphoribosyltransferase COG:COG0634, COG:F, EC:2.4.2.8, GO:0006166, KEGG:K00760, RefSeq:WP_011276752.1, SO:0001217, UniParc:UPI000054BF17, UniRef:UniRef100_A0A2J9WZQ3, UniRef:UniRef50_Q839B2, UniRef:UniRef90_A0A2J9WZQ3 contig_1 cds 2113663 2114958 - GCA012955505_02483 ttcA tRNA(Ile)-lysidine synthase COG:COG0037, COG:J, EC:6.3.4.19, KEGG:K04075, SO:0001217, UniParc:UPI000054BF18, UniRef:UniRef100_A0A2A1K9Z2, UniRef:UniRef50_Q5HRP5, UniRef:UniRef90_A0A2A1K9Z2 contig_1 cds 2115182 2115583 - GCA012955505_02484 yabR S1 domain-containing RNA-binding protein COG:COG1098, COG:R, GO:0003676, RefSeq:WP_011276753.1, SO:0001217, UniParc:UPI000054BF19, UniRef:UniRef100_A0A2A1K9B8, UniRef:UniRef50_P37560, UniRef:UniRef90_A0A653Y976 contig_1 cds 2115721 2116056 - GCA012955505_02485 Cell division protein DivIC KEGG:K13052, SO:0001217, UniRef:UniRef50_Q2G0R4, UniRef:UniRef90_A0A2A1K691 contig_1 cds 2116077 2116355 - GCA012955505_02486 hslR RNA-binding S4 domain-containing protein COG:COG1188, COG:J, RefSeq:WP_011276755.1, SO:0001217, UniParc:UPI000054BF1B, UniRef:UniRef100_A0A2A1K7S8, UniRef:UniRef50_P37557, UniRef:UniRef90_A0A2T4KN37 contig_1 cds 2116352 2117542 - GCA012955505_02487 yabN Nucleotide pyrophosphohydrolase COG:COG3956, COG:R, KEGG:K02499, RefSeq:WP_011276756.1, SO:0001217, UniParc:UPI000054BF1C, UniRef:UniRef100_A0A2A1K8G4, UniRef:UniRef50_A0A240AB46, UniRef:UniRef90_A0A2A1K8G4 contig_1 cds 2117542 2119155 - GCA012955505_02488 spoVB Polysaccharide biosynthesis protein COG:COG5841, COG:D, SO:0001217, UniParc:UPI000054BF1D, UniRef:UniRef100_A0A2A1K8N7, UniRef:UniRef50_A0A380G459, UniRef:UniRef90_A0A2A1K8N7 contig_1 cds 2119139 2122648 - GCA012955505_02489 mfd transcription-repair coupling factor COG:COG1197, COG:LK, EC:3.6.4.-, GO:0000716, GO:0003678, GO:0003684, GO:0005524, GO:0005737, GO:0006281, GO:0006355, GO:0016787, KEGG:K03723, RefSeq:WP_046464819.1, SO:0001217, UniParc:UPI000623EE6E, UniRef:UniRef100_UPI000623EE6E, UniRef:UniRef50_Q2G0R8, UniRef:UniRef90_Q4L3G0 contig_1 cds 2122645 2123217 - GCA012955505_02490 pth aminoacyl-tRNA hydrolase COG:COG0193, COG:J, EC:3.1.1.29, GO:0004045, GO:0005737, GO:0006412, RefSeq:WP_011276759.1, SO:0001217, UniParc:UPI000054BF1F, UniRef:UniRef100_Q4L3F9, UniRef:UniRef50_P37470, UniRef:UniRef90_Q4L3F9 contig_1 cds 2123386 2124051 - GCA012955505_02491 rplY 50S ribosomal protein L25/general stress protein Ctc COG:COG1825, COG:J, GO:0003735, GO:0006412, GO:0008097, GO:0022625, KEGG:K02897, RefSeq:WP_145414827.1, SO:0001217, UniParc:UPI0011A9EBD9, UniRef:UniRef100_UPI0011A9EBD9, UniRef:UniRef50_Q2FJE0, UniRef:UniRef90_Q4L3F8 contig_1 cds 2124235 2125200 - GCA012955505_02492 prs ribose-phosphate diphosphokinase COG:COG0462, COG:F, EC:2.7.6.1, GO:0000287, GO:0002189, GO:0004749, GO:0005524, GO:0005737, GO:0006015, GO:0006164, GO:0009156, GO:0016301, KEGG:K00948, RefSeq:WP_011276761.1, SO:0001217, UniParc:UPI000054BF21, UniRef:UniRef100_Q4L3F7, UniRef:UniRef50_Q97E93, UniRef:UniRef90_Q49V09 contig_1 cds 2125312 2126667 - GCA012955505_02493 glmU bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU COG:COG1207, COG:M, EC:2.3.1.157, EC:2.7.7.23, GO:0000287, GO:0000902, GO:0003977, GO:0005737, GO:0006048, GO:0008360, GO:0009245, GO:0009252, GO:0016020, GO:0019134, GO:0071555, KEGG:K04042, RefSeq:WP_011276762.1, SO:0001217, UniParc:UPI000054BF22, UniRef:UniRef100_Q4L3F6, UniRef:UniRef50_Q2YVU6, UniRef:UniRef90_Q4L3F6 contig_1 cds 2126875 2127177 - GCA012955505_02494 spoVG septation regulator SpoVG COG:COG2088, COG:D, GO:0000917, GO:0030435, KEGG:K06412, RefSeq:WP_011276763.1, SO:0001217, UniParc:UPI000054BF23, UniRef:UniRef100_Q4L3F5, UniRef:UniRef50_B9DLD5, UniRef:UniRef90_Q5HRQ7 contig_1 cds 2127245 2127625 - GCA012955505_02495 ridA Translation initiation inhibitor COG:COG0251, COG:V, RefSeq:WP_011276764.1, SO:0001217, UniParc:UPI000054BF24, UniRef:UniRef100_A0A2A1K6A2, UniRef:UniRef50_A0A9P6J9P4, UniRef:UniRef90_A0A380G3Q3 contig_1 cds 2127643 2128467 - GCA012955505_02496 purR pur operon repressor COG:COG0503, COG:F, GO:0003677, GO:0006355, GO:0009116, GO:0045892, GO:0045982, KEGG:K09685, SO:0001217, UniRef:UniRef50_I0JH29, UniRef:UniRef90_Q5HRQ9 contig_1 cds 2128484 2129332 - GCA012955505_02497 ispE 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase COG:COG1947, COG:I, EC:2.7.1.148, GO:0005524, GO:0016114, GO:0050515, KEGG:K00919, RefSeq:WP_011276766.1, SO:0001217, UniParc:UPI000054BF26, UniRef:UniRef100_Q4L3F2, UniRef:UniRef50_B9E8V7, UniRef:UniRef90_Q4L3F2 contig_1 cds 2129649 2129912 - GCA012955505_02498 Veg protein COG:COG4466, COG:S, RefSeq:WP_011276767.1, SO:0001217, UniParc:UPI000054BF27, UniRef:UniRef100_A0A2A1K8P5, UniRef:UniRef50_Q2G0S9, UniRef:UniRef90_Q2G0S9 contig_1 cds 2130125 2130841 - GCA012955505_02499 Ribosomal RNA small subunit methyltransferase A SO:0001217, UniRef:UniRef50_Q2G0T0 contig_1 cds 2130845 2131075 - GCA012955505_02500 DUF4093 domain-containing protein SO:0001217, UniRef:UniRef50_UPI00065B9643 contig_1 cds 2131348 2132118 - GCA012955505_02501 tatD TatD related DNase COG:COG0084, COG:N, RefSeq:WP_016931266.1, SO:0001217, UniParc:UPI000312751A, UniRef:UniRef100_A0A2A1K824, UniRef:UniRef50_P37545, UniRef:UniRef90_Q4L3E8 contig_1 cds 2132148 2134127 - GCA012955505_02502 metG methionine--tRNA ligase COG:COG0143, COG:J, EC:6.1.1.10, GO:0000049, GO:0004825, GO:0005524, GO:0005737, GO:0006431, RefSeq:WP_011276771.1, SO:0001217, UniParc:UPI000054BF2B, UniRef:UniRef100_Q4L3E7, UniRef:UniRef50_P23920, UniRef:UniRef90_Q8NY00 contig_1 cds 2134379 2135221 - GCA012955505_02503 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase COG:COG0313, COG:J, EC:2.1.1.198, GO:0000451, GO:0008649, GO:0008757, KEGG:K07056, RefSeq:WP_011276772.1, SO:0001217, UniParc:UPI000054BF2C, UniRef:UniRef100_Q4L3E6, UniRef:UniRef50_A0A380GAP2, UniRef:UniRef90_Q4L3E6 contig_1 cds 2135224 2135472 - GCA012955505_02504 yhbQ UPF0213 protein SH2523 COG:COG2827, COG:L, RefSeq:WP_011276773.1, SO:0001217, UniParc:UPI000054BF2D, UniRef:UniRef100_Q4L3E5, UniRef:UniRef50_Q3ITQ4, UniRef:UniRef90_Q4L3E5 contig_1 cds 2135465 2136181 - GCA012955505_02505 trmN6 Methyltransferase small domain-containing protein COG:COG4123, COG:J, SO:0001217, UniRef:UniRef50_A0A380G9L7, UniRef:UniRef90_Q4L3E4 contig_1 cds 2136339 2136515 - GCA012955505_02506 yabA DNA replication initiation control protein YabA COG:COG4467, COG:L, RefSeq:WP_368873973.1, SO:0001217, UniParc:UPI0026AB7D53, UniRef:UniRef100_A0A2A1K7U5, UniRef:UniRef50_Q99WB7, UniRef:UniRef90_A0A2A1K7U5 contig_1 cds 2136512 2136715 - GCA012955505_02507 hypothetical protein contig_1 cds 2136731 2137237 - GCA012955505_02508 yaaT (pseudo) Signal peptidase II COG:COG1774, COG:T, SO:0001217, UniRef:UniRef50_Q2G2W9, UniRef:UniRef90_A0A2A1K8I2 contig_1 cds 2137266 2137469 - GCA012955505_02509 hypothetical protein contig_1 cds 2137625 2138317 - GCA012955505_02510 DNA polymerase III subunit delta' SO:0001217, UniRef:UniRef50_UPI000BA503BE contig_1 cds 2138588 2138917 - GCA012955505_02511 darA Protein from nitrogen regulatory protein P-II (GLNB) family COG:COG3870, COG:T, RefSeq:WP_011276778.1, SO:0001217, UniParc:UPI000054BF32, UniRef:UniRef100_A0A2A1KBB0, UniRef:UniRef50_P37538, UniRef:UniRef90_Q2G229 contig_1 cds 2138951 2139394 - GCA012955505_02512 Thymidylate kinase SO:0001217, UniRef:UniRef50_A0A380DLR1 contig_1 cds 2139340 2139558 - GCA012955505_02513 hypothetical protein PFAM:PF02223.23 contig_1 cds 2139560 2139730 - GCA012955505_02514 hypothetical protein PFAM:PF03711.20 contig_1 cds 2139862 2140512 - GCA012955505_02515 ldcC (pseudo) Lysine decarboxylase COG:COG1982, COG:E, SO:0001217, UniRef:UniRef50_S2X7A8, UniRef:UniRef90_Q4L3D8 contig_1 cds 2140509 2140823 - GCA012955505_02516 rimL (pseudo) GNAT family N-acetyltransferase COG:COG1670, COG:JO, SO:0001217, UniRef:UniRef50_A0A0D0SMX0, UniRef:UniRef90_A0A2A1KBE3 contig_1 cds 2140771 2141040 - GCA012955505_02517 Spermidine N1-acetyltransferase SO:0001217, UniRef:UniRef50_A0A377TSU8 contig_1 rRNA 2141242 2141356 - GCA012955505_02518 rrf 5S ribosomal RNA GO:0003735, GO:0005840, KEGG:K01985, RFAM:RF00001, SO:0000652 contig_1 cds 2142019 2142615 - GCA012955505_02519 recR recombination mediator RecR COG:COG0353, COG:L, GO:0003677, GO:0006281, GO:0006310, GO:0046872, KEGG:K06187, RefSeq:WP_011276782.1, SO:0001217, UniParc:UPI000054BF36, UniRef:UniRef100_Q4L3D6, UniRef:UniRef50_Q6GJJ3, UniRef:UniRef90_Q6GJJ3 contig_1 cds 2142622 2142939 - GCA012955505_02520 ybaB YbaB/EbfC family nucleoid-associated protein COG:COG0718, COG:K, GO:0003677, GO:0005829, GO:0043590, RefSeq:WP_001213992.1, SO:0001217, UniParc:UPI0000054501, UniRef:UniRef100_Q2G0T4, UniRef:UniRef50_Q2G0T4, UniRef:UniRef90_Q2G0T4 contig_1 cds 2143092 2144807 - GCA012955505_02521 dnaX DNA polymerase III subunit gamma/tau COG:COG2812, COG:L, EC:2.7.7.7, GO:0003677, GO:0003887, GO:0005524, GO:0006260, GO:0009360, KEGG:K02343, RefSeq:WP_070823172.1, SO:0001217, UniParc:UPI0008A8654A, UniRef:UniRef100_UPI0008A8654A, UniRef:UniRef50_A0A9X6AJV3, UniRef:UniRef90_A0A5B2YR20 contig_1 cds 2144876 2145478 - GCA012955505_02522 yhbS N-acetyltransferase COG:COG3153, COG:R, SO:0001217, UniRef:UniRef50_Q2G0T6, UniRef:UniRef90_A0A2A1K9Z6 contig_1 ncRNA 2145709 2145978 - GCA012955505_02523 Bacteria_large_SRP Bacterial large signal recognition particle RNA RFAM:RF01854, SO:0000655 contig_1 ncRNA 2145761 2145860 - GCA012955505_02524 Bacteria_small_SRP Bacterial small signal recognition particle RNA RFAM:RF00169, SO:0000655 contig_1 cds 2146069 2146794 - GCA012955505_02525 treR trehalose operon repressor COG:COG2188, COG:K, GO:0003677, GO:0003700, GO:0006355, KEGG:K03486, RefSeq:WP_011276785.1, SO:0001217, UniParc:UPI000054BF39, UniRef:UniRef100_A0A2A1K9C0, UniRef:UniRef50_A0A291JNW9, UniRef:UniRef90_A0A2A1K9C0 contig_1 cds 2146827 2148461 - GCA012955505_02526 treC alpha,alpha-phosphotrehalase COG:COG0366, COG:G, EC:3.2.1.93, GO:0005737, GO:0005991, GO:0008788, RefSeq:WP_011276786.1, SO:0001217, UniParc:UPI000054BF3A, UniRef:UniRef100_A0A2A1K7Y0, UniRef:UniRef50_A0A2A1K7Y0, UniRef:UniRef90_A0A2A1K7Y0 contig_1 cds 2148555 2150003 - GCA012955505_02527 treB PTS trehalose transporter subunit IIBC COG:COG1264, COG:G, EC:2.7.1.201, GO:0008982, GO:0009401, GO:0015574, GO:0015771, GO:0016020, RefSeq:WP_016931394.1, SO:0001217, UniParc:UPI00031D55CA, UniRef:UniRef100_A0A2A1KAV8, UniRef:UniRef50_A0A7S8HGB6, UniRef:UniRef90_A0A5B2YS91 contig_1 tRNA 2150219 2150311 - GCA012955505_02528 trnS tRNA-Ser(tga) SO:0000269 contig_1 cds 2150424 2151887 - GCA012955505_02529 gltD NADH-glutamate synthase small subunit COG:COG0493, COG:ER, RefSeq:WP_037570145.1, SO:0001217, UniParc:UPI0004A96E71, UniRef:UniRef100_UPI0004A96E71, UniRef:UniRef50_B9DLG4, UniRef:UniRef90_Q4L3C9 contig_1 cds 2151906 2156426 - GCA012955505_02530 gltB glutamate synthase large subunit COG:COG0070, COG:E, EC:1.4.1.13, GO:0003824, GO:0006537, GO:0008152, GO:0015930, GO:0016491, RefSeq:WP_046309772.1, SO:0001217, UniParc:UPI00061A1162, UniRef:UniRef100_A0A2A1KCV0, UniRef:UniRef50_A0A2X2UM59, UniRef:UniRef90_A0A5B2YT99 contig_1 cds 2156584 2157477 + GCA012955505_02531 gltC glutamate biosynthesis transcriptional regulator GltC COG:COG0583, COG:K, GO:0003700, GO:1902065, RefSeq:WP_011276790.1, SO:0001217, UniParc:UPI000054BF3E, UniRef:UniRef100_A0A2A1K9J5, UniRef:UniRef50_A0A380G2C4, UniRef:UniRef90_A0A2A1K9J5 contig_1 cds 2157597 2158739 + GCA012955505_02532 YibE/F-like protein COG:COG5438, COG:S, SO:0001217, UniRef:UniRef50_Q2G0U4, UniRef:UniRef90_A0A2A1K7U2 contig_1 cds 2158736 2159530 + GCA012955505_02533 YibE/F-like protein COG:COG5438, COG:S, RefSeq:WP_011276792.1, SO:0001217, UniParc:UPI000054BF40, UniRef:UniRef100_A0A2K0AYY5, UniRef:UniRef50_Q2G0U5, UniRef:UniRef90_A0A2K0AYY5 contig_1 cds 2159643 2160107 - GCA012955505_02534 rimI N-acetyltransferase COG:COG0456, COG:J, RefSeq:WP_011276793.1, SO:0001217, UniParc:UPI000054BF41, UniRef:UniRef100_A0A2A1KA69, UniRef:UniRef50_A0A1W5QDU9, UniRef:UniRef90_A0A2A1KA69 contig_1 cds 2160115 2160432 - GCA012955505_02535 mutT DNA mismatch repair protein MutT COG:COG0494, COG:V, SO:0001217, UniRef:UniRef50_A0A380H9T0, UniRef:UniRef90_A0A2A1K9Y7 contig_1 cds 2160571 2160849 + GCA012955505_02536 Holin RefSeq:WP_011276795.1, SO:0001217, UniParc:UPI000054BF43, UniRef:UniRef100_A0A2A1K9B3, UniRef:UniRef50_Q2G0U8, UniRef:UniRef90_A0A2A1K9B3 contig_1 cds 2160912 2161901 - GCA012955505_02537 sle1 SAG1386/EF1546 family surface-associated protein COG:COG3942, COG:M, EC:3.5.1.28, GO:0000917, GO:0005576, GO:0008745, GO:0008932, GO:0009986, GO:0031640, GO:0042742, GO:0071555, RefSeq:WP_011276796.1, SO:0001217, UniParc:UPI000054BF44, UniRef:UniRef100_Q4L3C1, UniRef:UniRef50_Q2G0U9, UniRef:UniRef90_Q4L3C1 contig_1 cds 2162341 2163486 - GCA012955505_02538 metC bifunctional cystathionine gamma-lyase/homocysteine desulfhydrase COG:COG0626, COG:E, EC:4.4.1.1, EC:4.4.1.2, GO:0019346, GO:0030170, KEGG:K17217, RefSeq:WP_016931207.1, SO:0001217, UniParc:UPI0002F40174, UniRef:UniRef100_A0A2A1KAV0, UniRef:UniRef50_Q1M0P5, UniRef:UniRef90_A0A4V6KKY9 contig_1 cds 2163489 2164385 - GCA012955505_02539 cysK CysM protein COG:COG0031, COG:E, RefSeq:WP_016931206.1, SO:0001217, UniParc:UPI00031F35B2, UniRef:UniRef100_A0A2A1KBF6, UniRef:UniRef50_Q2G0V4, UniRef:UniRef90_Q4L3B9 contig_1 cds 2164659 2165183 + GCA012955505_02540 Pentapeptide repeat-containing protein SO:0001217, UniRef:UniRef50_Q4L3B8 contig_1 cds 2165305 2165844 + GCA012955505_02541 Phage protein RefSeq:WP_016931204.1, SO:0001217, UniParc:UPI0002E22454, UniRef:UniRef100_A0A7Z1SAS5, UniRef:UniRef50_A0A380G4I3, UniRef:UniRef90_Q4L3B7 contig_1 cds 2165897 2167225 - GCA012955505_02542 yocR Transporter COG:COG0733, COG:R, RefSeq:WP_016931203.1, SO:0001217, UniParc:UPI00035F0ADB, UniRef:UniRef100_A0A2A1K7T2, UniRef:UniRef50_A0A654CN93, UniRef:UniRef90_A0A2A1K7T2 contig_1 cds 2167376 2167663 + GCA012955505_02543 GRAM domain-containing protein SO:0001217, UniRef:UniRef50_A0A2A1KCU1, UniRef:UniRef90_A0A2A1KCU1 contig_1 cds 2167972 2168220 - GCA012955505_02544 DUF1381 domain-containing protein RefSeq:WP_011276803.1, SO:0001217, UniParc:UPI000054BF4B, UniRef:UniRef100_A0A2A1KA60, UniRef:UniRef50_Q5HRV1, UniRef:UniRef90_A0A5B2YY21 contig_1 cds 2168235 2168966 - GCA012955505_02545 yvaK Carboxylesterase COG:COG1647, COG:Q, RefSeq:WP_011276804.1, SO:0001217, UniParc:UPI000054BF4C, UniRef:UniRef100_A0A2A1K9X7, UniRef:UniRef50_Q2G0V7, UniRef:UniRef90_A0A2A1K9X7 contig_1 cds 2169033 2169890 - GCA012955505_02546 rssA PNPLA domain-containing protein COG:COG1752, COG:R, RefSeq:WP_011276805.1, SO:0001217, UniParc:UPI000054BF4D, UniRef:UniRef100_Q4L3B2, UniRef:UniRef50_Q4L3B2, UniRef:UniRef90_Q4L3B2 contig_1 cds 2169923 2170633 - GCA012955505_02547 pgpB Phosphoesterase PA-phosphatase COG:COG0671, COG:I, SO:0001217, UniRef:UniRef50_A0A380G202, UniRef:UniRef90_A0A2A1K7V7 contig_1 cds 2170669 2171361 - GCA012955505_02548 rimL N-acetyltransferase COG:COG1670, COG:JO, RefSeq:WP_011276807.1, SO:0001217, UniParc:UPI000054BF4F, UniRef:UniRef100_A0A2A1KAT9, UniRef:UniRef50_A0A0B7LCR6, UniRef:UniRef90_A0A2A1KAT9 contig_1 cds 2171561 2171923 - GCA012955505_02549 mpsC Na+-translocating membrane putative-generating system MpsC domain-containing protein COG:C, COG:COG5609, RefSeq:WP_011276808.1, SO:0001217, UniParc:UPI000054BF50, UniRef:UniRef100_A0A2A1KBE5, UniRef:UniRef50_A0A7U7PXA8, UniRef:UniRef90_A0A2T4KMQ7 contig_1 cds 2171993 2174563 - GCA012955505_02550 dabA putative inorganic carbon transporter subunit DabA COG:C, COG:COG3002, GO:0005886, GO:0008270, KEGG:K09822, RefSeq:WP_145463281.1, SO:0001217, UniParc:UPI0011A6611D, UniRef:UniRef100_UPI0011A6611D, UniRef:UniRef50_Q2G0W1, UniRef:UniRef90_Q4L3A8 contig_1 cds 2174953 2175894 - GCA012955505_02551 NADH dehydrogenase, subunit 5 SO:0001217, UniRef:UniRef50_A0A2X2KA26 contig_1 sorf 2176414 2176476 + GCA012955505_02552 Alpha family phenol-soluble modulin RefSeq:WP_089046351.1, SO:0001217, UniParc:UPI000B5B5CBA, UniRef:UniRef100_A0A2K3VCG6, UniRef:UniRef50_A0A4Z1B5K0, UniRef:UniRef90_A0A4Z1B5K0 contig_1 cds 2177242 2177670 + GCA012955505_02553 rimI GNAT family N-acetyltransferase COG:COG0456, COG:J, RefSeq:WP_016931199.1, SO:0001217, UniParc:UPI000378E710, UniRef:UniRef100_A0A2A1KCT1, UniRef:UniRef50_A0A380G4J2, UniRef:UniRef90_A0A2A1KCT1 contig_1 cds 2177586 2178101 - GCA012955505_02554 GNAT family N-acetyltransferase RefSeq:WP_011276813.1, SO:0001217, UniParc:UPI000054BF55, UniRef:UniRef100_A0A2A1KA50, UniRef:UniRef50_A0A2A1KA50, UniRef:UniRef90_A0A2A1KA50 contig_1 cds 2179546 2180844 + GCA012955505_02555 trkG Potassium transporter KtrB COG:COG0168, COG:P, SO:0001217, UniRef:UniRef50_Q4L3A1, UniRef:UniRef90_Q4L3A1 contig_1 cds 2181035 2181304 - GCA012955505_02556 hypothetical protein RefSeq:WP_011276817.1, SO:0001217, UniParc:UPI000054BF59, UniRef:UniRef100_A0A2A1K981, UniRef:UniRef50_A0A2A1K981, UniRef:UniRef90_A0A2A1K981 contig_1 cds 2181310 2181882 - GCA012955505_02557 xtmA Terminase small subunit COG:COG3728, COG:X, RefSeq:WP_011276818.1, SO:0001217, UniParc:UPI000054BF5A, UniRef:UniRef100_A0A2A1K7U6, UniRef:UniRef50_Q4L4N2, UniRef:UniRef90_A0A2A1K7U6 contig_1 cds 2181884 2182222 - GCA012955505_02558 csgD RNA polymerase sigma-70 region 4 domain-containing protein COG:COG2771, COG:K, RefSeq:WP_011276819.1, SO:0001217, UniParc:UPI000054BF5B, UniRef:UniRef100_A0A2A1KAS9, UniRef:UniRef50_Q4L4N1, UniRef:UniRef90_Q4L4N1 contig_1 cds 2182219 2182668 - GCA012955505_02559 Pathogenicity island protein RefSeq:WP_011276820.1, SO:0001217, UniParc:UPI000054BF5C, UniRef:UniRef100_A0A2A1KBD6, UniRef:UniRef50_Q4L4N0, UniRef:UniRef90_Q4L4N0 contig_1 sorf 2182723 2182758 - GCA012955505_02560 DUF536 domain-containing protein SO:0001217, UniParc:UPI000054BF5D, UniRef:UniRef100_Q4L396, UniRef:UniRef50_A0A2K0AWG5, UniRef:UniRef90_Q4L396 contig_1 cds 2183133 2183648 + GCA012955505_02561 hypothetical protein PFAM:PF02037.33 contig_1 cds 2183806 2183964 + GCA012955505_02562 hypothetical protein SO:0001217, UniRef:UniRef50_Q4L388, UniRef:UniRef90_Q4L388 contig_1 cds 2184072 2184299 + GCA012955505_02563 Phage integrase family protein SO:0001217, UniRef:UniRef50_A0A380DSY7 contig_1 cds 2184419 2185285 + GCA012955505_02564 site-specific integrase SO:0001217, UniRef:UniRef50_UPI000D1CBF53 contig_1 cds 2185451 2186992 - GCA012955505_02565 guaA glutamine-hydrolyzing GMP synthase COG:COG0519, COG:F, EC:6.3.5.2, GO:0003921, GO:0003922, GO:0005524, GO:0005829, GO:0006177, GO:0016462, KEGG:K01951, RefSeq:WP_011276828.1, SO:0001217, UniParc:UPI000054BF64, UniRef:UniRef100_Q4L386, UniRef:UniRef50_Q2G0Y6, UniRef:UniRef90_Q2G0Y6 contig_1 cds 2187166 2188632 - GCA012955505_02566 guaB IMP dehydrogenase COG:COG3448, COG:T, EC:1.1.1.205, GO:0000166, GO:0003938, GO:0006164, GO:0006177, GO:0006183, GO:0046872, KEGG:K00088, RefSeq:WP_011276829.1, SO:0001217, UniParc:UPI000054BF65, UniRef:UniRef100_Q4L385, UniRef:UniRef50_Q2G0Y7, UniRef:UniRef90_Q4L385 contig_1 cds 2188671 2189939 - GCA012955505_02567 uraA Xanthine permease COG:COG2233, COG:F, RefSeq:WP_016931192.1, SO:0001217, UniParc:UPI000307DDE0, UniRef:UniRef100_A0A2A1KCS2, UniRef:UniRef50_P42086, UniRef:UniRef90_A0A1J6I5H8 contig_1 cds 2189936 2190517 - GCA012955505_02568 xpt xanthine phosphoribosyltransferase COG:COG0503, COG:F, EC:2.4.2.22, GO:0000310, GO:0005737, GO:0006166, GO:0032265, GO:0043101, GO:0046110, KEGG:K03816, RefSeq:WP_011276831.1, SO:0001217, UniParc:UPI000054BF67, UniRef:UniRef100_Q4L383, UniRef:UniRef50_P42085, UniRef:UniRef90_Q4L383 contig_1 ncRNA-region 2190775 2190877 - Purine riboswitch aptamer RFAM:RF00167, SO:0000035 contig_1 cds 2191096 2191503 + GCA012955505_02569 UPF0355 protein SH2586 RefSeq:WP_011276832.1, SO:0001217, UniParc:UPI000054BF68, UniRef:UniRef100_Q4L382, UniRef:UniRef50_Q4L382, UniRef:UniRef90_Q4L382 contig_1 cds 2191652 2192320 + GCA012955505_02570 N-acetyltransferase domain-containing protein RefSeq:WP_011276833.1, SO:0001217, UniParc:UPI000054BF69, UniRef:UniRef100_A0A2A1K970, UniRef:UniRef50_K9B354, UniRef:UniRef90_A0A2A1K970 contig_1 cds 2192439 2193089 + GCA012955505_02571 DNA-binding protein SO:0001217, UniRef:UniRef50_S2YDN8 contig_1 cds 2193354 2194742 + GCA012955505_02572 tcyP L-cystine uptake protein TcyP COG:COG1823, COG:E, RefSeq:WP_011276835.1, SO:0001217, UniParc:UPI000054BF6B, UniRef:UniRef100_A0A7Z1N835, UniRef:UniRef50_P54596, UniRef:UniRef90_A0A2A1KAR9 contig_1 cds 2194826 2195581 - GCA012955505_02573 nfsA oxygen-insensitive NADPH nitroreductase COG:C, COG:COG0778, EC:1.6.-.-, GO:0016491, RefSeq:WP_011276836.1, SO:0001217, UniParc:UPI000054BF6C, UniRef:UniRef100_Q4L378, UniRef:UniRef50_Q2G0Z5, UniRef:UniRef90_Q4L378 contig_1 cds 2195739 2196518 + GCA012955505_02574 mhpD 2-keto-4-pentenoate hydratase COG:COG3971, COG:Q, RefSeq:WP_016931189.1, SO:0001217, UniParc:UPI0002DB02E2, UniRef:UniRef100_A0A2A1K9F5, UniRef:UniRef50_A0A380G5W0, UniRef:UniRef90_Q4L377 contig_1 cds 2196839 2197408 + GCA012955505_02575 ahpC alkyl hydroperoxide reductase subunit C COG:COG0450, COG:V, EC:1.11.1.26, GO:0005829, GO:0006979, GO:0008379, GO:0033554, GO:0042744, GO:0045454, GO:0102039, RefSeq:WP_011276838.1, SO:0001217, UniParc:UPI000054BF6E, UniRef:UniRef100_Q4L376, UniRef:UniRef50_K0J4Q8, UniRef:UniRef90_Q8CMQ2 contig_1 cds 2197423 2198946 + GCA012955505_02576 ahpF alkyl hydroperoxide reductase subunit F COG:COG3634, COG:V, GO:0000302, GO:0008785, GO:0050660, GO:0051287, RefSeq:WP_011276839.1, SO:0001217, UniParc:UPI000054BF6F, UniRef:UniRef100_Q4L375, UniRef:UniRef50_O05204, UniRef:UniRef90_Q4L375 contig_1 cds 2199288 2199914 + GCA012955505_02577 NDxxF motif lipoprotein RefSeq:WP_016931187.1, SO:0001217, UniParc:UPI0002FF442D, UniRef:UniRef100_A0A2A1K9J3, UniRef:UniRef50_Q4L374, UniRef:UniRef90_Q4L374 contig_1 cds 2200007 2200585 - GCA012955505_02578 phoE phosphoglycerate mutase (2,3-diphosphoglycerate-dependent) COG:COG0406, COG:G, RefSeq:WP_016931186.1, SO:0001217, UniParc:UPI0003147DC4, UniRef:UniRef100_A0A2A1K846, UniRef:UniRef50_A0A380CV51, UniRef:UniRef90_Q4L373 contig_1 cds 2200609 2201238 - GCA012955505_02579 rhtB LysE family translocator COG:COG1280, COG:E, KEGG:K05835, RefSeq:WP_016931185.1, SO:0001217, UniParc:UPI0002DC82A6, UniRef:UniRef100_A0A2A1K7K4, UniRef:UniRef50_Q4L372, UniRef:UniRef90_Q4L372 contig_1 cds 2201563 2201757 + GCA012955505_02580 Phage protein SO:0001217, UniRef:UniRef50_A0A2K4DUM3 contig_1 cds 2201754 2202068 - GCA012955505_02581 tnpA IS200/IS605 family transposase GO:0004803, SO:0001217, UniRef:UniRef50_A8RX41, UniRef:UniRef90_UPI0013692BD3 contig_1 gap 2202167 2202176 . contig_1 cds 2202446 2202709 - GCA012955505_02582 transposase SO:0001217, UniRef:UniRef50_A0A9Q5JM32, UniRef:UniRef90_UPI0021B1FAF0 contig_1 cds 2202945 2203193 - GCA012955505_02583 GlsB/YeaQ/YmgE family stress response membrane protein RefSeq:WP_011276862.1, SO:0001217, UniParc:UPI000054BF87, UniRef:UniRef100_A0A028Z2W3, UniRef:UniRef50_F4BP16, UniRef:UniRef90_A0A028Z2W3 contig_1 cds 2203371 2203655 - GCA012955505_02584 Metal-dependent hydrolase SO:0001217, UniRef:UniRef50_A0A023UF93, UniRef:UniRef90_A0A023UF93 contig_1 cds 2204216 2204461 + GCA012955505_02585 Transcriptional regulator SO:0001217, UniRef:UniRef50_Q2G104, UniRef:UniRef90_A0A028Z3F9 contig_1 cds 2204631 2205107 + GCA012955505_02586 (pseudo) Ltp family lipoprotein SO:0001217, UniRef:UniRef50_UPI00295EABEC, UniRef:UniRef90_UPI00295EABEC contig_1 cds 2205170 2205631 + GCA012955505_02587 (pseudo) Putative host cell surface-exposed lipoprotein Ltp-like HTH region domain-containing protein SO:0001217, UniRef:UniRef50_A0A023UFW4, UniRef:UniRef90_A0A023UFW4 contig_1 cds 2205838 2206080 - GCA012955505_02588 rpsR 30S ribosomal protein S18 COG:COG0238, COG:J, GO:0000314, GO:0003735, GO:0006412, GO:0022627, GO:0070181, KEGG:K02963, RefSeq:WP_002447994.1, SO:0001217, UniParc:UPI000054BF8B, UniRef:UniRef100_Q4L342, UniRef:UniRef50_P21475, UniRef:UniRef90_Q2G111 contig_1 cds 2206128 2206640 - GCA012955505_02589 ssb Single-stranded DNA-binding protein COG:COG0629, COG:L, RefSeq:WP_011276866.1, SO:0001217, UniParc:UPI000054BF8C, UniRef:UniRef100_A0A028Z400, UniRef:UniRef50_A0A380G5F8, UniRef:UniRef90_A0A380G5F8 contig_1 cds 2206662 2206958 - GCA012955505_02590 rpsF 30S ribosomal protein S6 COG:COG0360, COG:J, GO:0000314, GO:0003735, GO:0005737, GO:0005840, GO:0006412, GO:0022627, GO:0070181, GO:1990904, KEGG:K02990, RefSeq:WP_011276867.1, SO:0001217, UniParc:UPI000054BF8D, UniRef:UniRef100_Q4L340, UniRef:UniRef50_P21468, UniRef:UniRef90_Q5HRZ5 contig_1 cds 2207252 2208016 + GCA012955505_02591 acm Glycosyl hydrolase COG:COG3757, COG:M, KEGG:K07273, SO:0001217, UniRef:UniRef50_Q49UP9, UniRef:UniRef90_A0A023UEM1 contig_1 cds 2208082 2208273 + GCA012955505_02592 Phage protein RefSeq:WP_011276869.1, SO:0001217, UniParc:UPI000054BF8F, UniRef:UniRef100_A0A380G4L3, UniRef:UniRef50_A0A380G4L3, UniRef:UniRef90_A0A380G4L3 contig_1 cds 2208415 2209512 - GCA012955505_02593 ychF redox-regulated ATPase YchF COG:COG0012, COG:J, GO:0005524, GO:0005525, GO:0016887, RefSeq:WP_011276870.1, SO:0001217, UniParc:UPI000054BF90, UniRef:UniRef100_A0A028Z2X3, UniRef:UniRef50_P0ABU2, UniRef:UniRef90_A0A654CN84 contig_1 cds 2209524 2209727 - GCA012955505_02594 Cytosolic protein COG:COG4481, COG:S, RefSeq:WP_011276871.1, SO:0001217, UniParc:UPI000054BF91, UniRef:UniRef100_A0A2K4DN82, UniRef:UniRef50_Q49UP7, UniRef:UniRef90_A0A0U1EEB4 contig_1 cds 2209749 2210294 - GCA012955505_02595 mscS (pseudo) Mechanosensitive ion channel COG:COG0668, COG:M, SO:0001217, UniRef:UniRef50_Q2G117, UniRef:UniRef90_A0A023UE29 contig_1 cds 2210643 2211428 - GCA012955505_02596 spo0J Chromosome partitioning protein ParB COG:COG1475, COG:D, KEGG:K03497, SO:0001217, UniRef:UniRef50_A0A7H9DP41, UniRef:UniRef90_A0A023UEM6 contig_1 cds 2212017 2212988 + GCA012955505_02597 metC Cystathionine gamma-synthase COG:COG0626, COG:E, SO:0001217, UniRef:UniRef50_A0A7U7JSJ6, UniRef:UniRef90_A0A7Z1N137 contig_1 cds 2213070 2214191 + GCA012955505_02598 metC Cystathionine beta-lyase MetC SO:0001217, UniRef:UniRef50_Q4L332 contig_1 cds 2214145 2215983 + GCA012955505_02599 metF bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase COG:COG0685, COG:E, EC:1.5.1.20, EC:2.1.1.10, RefSeq:WP_011276876.1, SO:0001217, UniParc:UPI000054BF96, UniRef:UniRef100_A0A028Z408, UniRef:UniRef50_A0A7U7JSP7, UniRef:UniRef90_A0A380G4E9 contig_1 cds 2215980 2216087 + GCA012955505_02600 hypothetical protein PFAM:PF08267.18 contig_1 cds 2216154 2216468 + GCA012955505_02601 hypothetical protein PFAM:PF08267.18 contig_1 cds 2216428 2217537 + GCA012955505_02602 metE (pseudo) 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase COG:COG0620, COG:E, EC:2.1.1.14, GO:0003871, GO:0008270, GO:0009086, GO:0032259, KEGG:K00549, SO:0001217, UniRef:UniRef50_Q8CWX6, UniRef:UniRef90_Q4L330 contig_1 cds 2217516 2217893 + GCA012955505_02603 5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase SO:0001217, UniRef:UniRef50_A0A377UT76 contig_1 cds 2218153 2218728 + GCA012955505_02604 Putative cyclase SO:0001217, UniRef:UniRef50_A0A1G6SBY8 contig_1 cds 2218891 2219637 - GCA012955505_02605 Inositol monophosphatase family protein SO:0001217, UniRef:UniRef50_K9AFE4, UniRef:UniRef90_A0A2K0AW92 contig_1 cds 2219909 2219998 + GCA012955505_02606 hypothetical protein contig_1 cds 2220079 2220366 + GCA012955505_02607 bstA bacillithiol transferase BstA SO:0001217, UniRef:UniRef50_UPI00103DA6B3 contig_1 cds 2220403 2220828 + GCA012955505_02608 Putative lactoylglutathione lyase SO:0001217, UniRef:UniRef50_Q49W22 contig_1 cds 2222049 2222450 - GCA012955505_02609 hypothetical protein contig_1 cds 2222643 2223299 - GCA012955505_02610 Secreted protein RefSeq:WP_001831384.1, SO:0001217, UniParc:UPI00019FAD82, UniRef:UniRef100_A0A2S6CP79, UniRef:UniRef50_A0A1H9U0J6, UniRef:UniRef90_A0A2S6CP79 contig_1 cds 2223363 2223572 - GCA012955505_02611 copZ copper chaperone CopZ GO:0005507, RefSeq:WP_001831373.1, SO:0001217, UniParc:UPI00019FAD83, UniRef:UniRef100_A0A2S6CP34, UniRef:UniRef50_A0A5R9B376, UniRef:UniRef90_A0A142BMT5 contig_1 cds 2223606 2224073 - GCA012955505_02612 P-type Cu(+) transporter SO:0001217, UniRef:UniRef50_A0A7X9AKB4 contig_1 cds 2224088 2225962 - GCA012955505_02613 Copper-exporting P-type ATPase SO:0001217, UniRef:UniRef50_A0A640LI51 contig_1 cds 2225981 2226256 - GCA012955505_02614 csoR CsoR KEGG:K21600, RefSeq:WP_001831396.1, SO:0001217, UniParc:UPI00019FAD85, UniRef:UniRef100_A0A2S6CP45, UniRef:UniRef50_A0A177ZT59, UniRef:UniRef90_A0A142BMT3 contig_1 cds 2226388 2226606 + GCA012955505_02615 Glutaredoxin 3 SO:0001217, UniRef:UniRef50_A0A497YLI4 contig_1 cds 2226654 2227475 - GCA012955505_02616 Cation transporter SO:0001217, UniRef:UniRef50_A0A135L2Z5, UniRef:UniRef90_A0A2S6CP72 contig_1 cds 2228122 2228724 - GCA012955505_02617 tnp IS6 family transposase GO:0004803, SO:0001217, UniRef:UniRef50_P0C1L0, UniRef:UniRef90_A0A7R7D585 contig_1 cds 2228749 2229276 - GCA012955505_02618 IS6 family transposase GO:0004803, SO:0001217, UniRef:UniRef50_A0A4Q7CTP8, UniRef:UniRef90_UPI000DA6ED96 contig_1 cds 2229434 2230108 - GCA012955505_02619 tnp IS6 family IS257R2 transposase COG:COG3316, COG:X, GO:0003677, GO:0004803, GO:0006310, GO:0015074, GO:0032196, IS:IS257R2, RefSeq:WP_001106019.1, SO:0001217, UniParc:UPI000000016E, UniRef:UniRef100_P14506, UniRef:UniRef50_P0C1L0, UniRef:UniRef90_P0C1L0 contig_1 cds 2230188 2231450 - GCA012955505_02620 mobV MobV family relaxase GO:0003677, GO:0006310, RefSeq:WP_000119405.1, SO:0001217, UniParc:UPI0000000170, UniRef:UniRef100_P0A0C5, UniRef:UniRef50_P0A0C5, UniRef:UniRef90_P0A0C5 contig_1 oriC 2231451 2231929 ? origin of replication contig_1 cds 2231957 2232361 - GCA012955505_02621 bleO bleomycin binding protein COG:COG0346, COG:Q, GO:0046677, NCBIProtein:WP_001242578.1, RefSeq:WP_001242578.1, SO:0001217, UniParc:UPI000004B83D, UniRef:UniRef100_A0A2L1K593, UniRef:UniRef50_P67925, UniRef:UniRef90_P67925 contig_1 cds 2232578 2233321 - GCA012955505_02622 aadD1 aminoglycoside O-nucleotidyltransferase ANT(4')-Ia COG:COG1669, COG:R, EC:2.7.7.-, GO:0016779, GO:0046677, KEGG:K17882, NCBIProtein:WP_001014230.1, SO:0001217, UniParc:UPI0001BEF5B1, UniRef:UniRef100_D2I9F5, UniRef:UniRef50_P05058, UniRef:UniRef90_P05058 contig_1 cds 2233554 2234228 - GCA012955505_02623 tnp IS6 family IS257R2 transposase COG:COG3316, COG:X, GO:0003677, GO:0004803, GO:0006310, GO:0015074, GO:0032196, IS:IS257R2, RefSeq:WP_001106019.1, SO:0001217, UniParc:UPI000000016E, UniRef:UniRef100_P14506, UniRef:UniRef50_P0C1L0, UniRef:UniRef90_P0C1L0 contig_1 ncRNA 2234372 2234469 - GCA012955505_02624 fstAT Fst antitoxin sRNA RFAM:RF01797, SO:0000655 contig_1 cds 2234557 2234775 + GCA012955505_02625 transposase SO:0001217, UniRef:UniRef50_A0A9Q5JM32, UniRef:UniRef90_UPI00066000E8 contig_1 ncRNA 2236017 2236116 - GCA012955505_02626 fstAT Fst antitoxin sRNA RFAM:RF01797, SO:0000655 contig_1 cds 2236290 2236808 - GCA012955505_02627 yajL putative protein SERP1413 COG:COG0693, COG:V, RefSeq:WP_016931402.1, SO:0001217, UniParc:UPI0002E0DE35, UniRef:UniRef100_UPI0002E0DE35, UniRef:UniRef50_P0A0K3, UniRef:UniRef90_Q49WT1 contig_1 cds 2236897 2237532 - GCA012955505_02628 ulaD 3-hexulose-6-phosphate synthase COG:COG0269, COG:G, RefSeq:WP_053020041.1, SO:0001217, UniParc:UPI00069FDF0F, UniRef:UniRef100_UPI00069FDF0F, UniRef:UniRef50_P42405, UniRef:UniRef90_A0A328A319 contig_1 cds 2237634 2237984 + GCA012955505_02629 Transcriptional regulator RefSeq:WP_053020040.1, SO:0001217, UniParc:UPI00069EFF41, UniRef:UniRef100_UPI00069EFF41, UniRef:UniRef50_A0A0B4RBW5, UniRef:UniRef90_A0A2K0A9V6 contig_1 ncRNA 2238061 2238286 - GCA012955505_02630 tsr24 S. aureus tsr24 small RNA RFAM:RF02577, SO:0000655 contig_1 rRNA 2238216 2238328 - GCA012955505_02631 rrf 5S ribosomal RNA GO:0003735, GO:0005840, KEGG:K01985, RFAM:RF00001, SO:0000652 contig_1 rRNA 2238400 2241321 - GCA012955505_02632 rrl 23S ribosomal RNA GO:0003735, GO:0005840, KEGG:K01980, RFAM:RF02541, SO:0001001 contig_1 rRNA 2241403 2242953 + GCA012955505_02633 rrs 16S ribosomal RNA GO:0003735, GO:0005840, KEGG:K01977, RFAM:RF00177, SO:0001000 contig_1 cds 2243124 2244740 + GCA012955505_02634 tnp IS1182 family transposase COG:COG3666, COG:X, GO:0004803, KEGG:K07487, SO:0001217, UniRef:UniRef50_A0A9P2Z0V2, UniRef:UniRef90_Q3YK41 contig_1 cds 2244727 2246043 - GCA012955505_02635 tnp ISL3 family transposase COG:COG3464, COG:X, GO:0004803, KEGG:K07485, RefSeq:WP_011275929.1, SO:0001217, UniParc:UPI000054BBD9, UniRef:UniRef100_Q4L554, UniRef:UniRef50_A0A640MZ23, UniRef:UniRef90_A0A640MZ23 contig_1 cds 2246152 2246766 - GCA012955505_02636 DUF1542 domain-containing protein SO:0001217, UniRef:UniRef50_A0A7Z1SC79, UniRef:UniRef90_UPI00214DE02F contig_1 cds 2247229 2247999 + GCA012955505_02637 Bacterial Ig domain-containing protein SO:0001217, UniRef:UniRef50_E9DQU8 contig_1 tRNA 2248094 2248166 - GCA012955505_02638 trnK tRNA-Lys(ttt) SO:0000265 contig_1 tRNA 2248170 2248244 - GCA012955505_02639 trnQ tRNA-Gln(ttg) SO:0000261 contig_1 tRNA 2248251 2248334 - GCA012955505_02640 trnY tRNA-Tyr(gta) SO:0000272 contig_1 tRNA 2248345 2248420 - GCA012955505_02641 trnV tRNA-Val(tac) SO:0000273 contig_1 tRNA 2248426 2248500 - GCA012955505_02642 trnE tRNA-Glu(ttc) SO:0000259 contig_1 tRNA 2248502 2248576 - GCA012955505_02643 trnN tRNA-Asn(gtt) SO:0000257 contig_1 rRNA 2248589 2248703 - GCA012955505_02644 rrf 5S ribosomal RNA GO:0003735, GO:0005840, KEGG:K01985, RFAM:RF00001, SO:0000652 contig_1 cds 2248715 2249443 - GCA012955505_02645 ISL3 family transposase GO:0004803, KEGG:K07485, SO:0001217, UniRef:UniRef50_Q4L348, UniRef:UniRef90_UPI0012B18204 contig_1 gap 2249483 2249492 . contig_1 cds 2249644 2249748 - GCA012955505_02646 hypothetical protein contig_1 cds 2250015 2250206 + GCA012955505_02647 hypothetical protein contig_1 rRNA 2250780 2250895 - GCA012955505_02648 rrf 5S ribosomal RNA GO:0003735, GO:0005840, KEGG:K01985, RFAM:RF00001, SO:0000652 contig_1 ncRNA 2250983 2251208 - GCA012955505_02649 tsr24 S. aureus tsr24 small RNA RFAM:RF02577, SO:0000655 contig_1 cds 2251207 2251719 - GCA012955505_02650 DUF1542 domain-containing protein SO:0001217, UniRef:UniRef50_UPI001D0D36BB, UniRef:UniRef90_UPI0010FBFA54 contig_1 cds 2251771 2251995 - GCA012955505_02651 hypothetical protein contig_1 cds 2252110 2252448 - GCA012955505_02652 hypothetical protein SO:0001217, UniRef:UniRef50_A0AAW5TKL7 contig_1 cds 2252837 2253064 + GCA012955505_02653 DUF1542 domain-containing protein SO:0001217, UniRef:UniRef50_UPI00214DADFD contig_1 tRNA 2253066 2253142 + GCA012955505_02654 trnI tRNA-Ile(gat) SO:0000263 contig_1 tRNA 2253160 2253235 + GCA012955505_02655 trnA tRNA-Ala(tgc) SO:0000254 contig_1 cds 2254251 2254379 + GCA012955505_02656 hypothetical protein PFAM:PF07564.17 contig_1 tRNA 2254906 2254982 - GCA012955505_02657 trnI tRNA-Ile(gat) SO:0000263 contig_1 tRNA 2255145 2255221 - GCA012955505_02658 trnI tRNA-Ile(gat) SO:0000263 contig_1 cds 2255944 2256108 + GCA012955505_02659 hypothetical protein contig_1 gap 2256181 2256190 .