# Annotated with Bakta # Software: v1.11.4 # Database: v6.0, full # DOI: 10.1099/mgen.0.000685 # URL: github.com/oschwengers/bakta #Sequence Id Type Start Stop Strand Locus Tag Gene Product DbXrefs contig_1 cds 544 1905 + GCA000560365_00001 dnaA chromosomal replication initiator protein DnaA COG:COG0593, COG:L, EC:3.6.4.-, GO:0003677, GO:0003688, GO:0005524, GO:0005737, GO:0005886, GO:0006270, GO:0006275, GO:0016887, KEGG:K02313, RefSeq:WP_001290433.1, SO:0001217, UniParc:UPI000005498B, UniRef:UniRef100_Q2G2H5, UniRef:UniRef50_Q2G2H5, UniRef:UniRef90_Q2G2H5 contig_1 oriC 1917 2182 ? origin of replication contig_1 cds 2183 3316 + GCA000560365_00002 dnaN DNA polymerase III subunit beta COG:COG0592, COG:L, EC:2.7.7.7, GO:0003677, GO:0003887, GO:0005737, GO:0006260, GO:0006271, GO:0008408, GO:0009360, KEGG:K02338, RefSeq:WP_000969811.1, SO:0001217, UniParc:UPI0000050CC9, UniRef:UniRef100_Q5HJZ4, UniRef:UniRef50_Q9RCA1, UniRef:UniRef90_Q5HK00 contig_1 cds 3706 3942 + GCA000560365_00003 ybcJ S4 domain-containing protein YaaA COG:COG2501, COG:J, KEGG:K14761, RefSeq:WP_000249647.1, SO:0001217, UniParc:UPI00006E4540, UniRef:UniRef100_A0A7Z7QWA9, UniRef:UniRef50_A0A028ZHC3, UniRef:UniRef90_A0A7Z7YU32 contig_1 cds 3939 5051 + GCA000560365_00004 recF DNA replication/repair protein RecF COG:COG1195, COG:L, GO:0000731, GO:0003697, GO:0005524, GO:0005737, GO:0006260, GO:0006281, GO:0006302, GO:0006310, GO:0009432, RefSeq:WP_000775113.1, SO:0001217, UniParc:UPI000005498D, UniRef:UniRef100_Q2G275, UniRef:UniRef50_Q9CE70, UniRef:UniRef90_Q2G275 contig_1 cds 5061 6995 + GCA000560365_00005 gyrB DNA topoisomerase (ATP-hydrolyzing) subunit B COG:COG0187, COG:L, EC:5.6.2.2, GO:0003677, GO:0003918, GO:0005524, GO:0005694, GO:0005737, GO:0006261, GO:0006265, GO:0034335, GO:0046872, KEGG:K02470, RefSeq:WP_000255586.1, SO:0001217, UniParc:UPI000005498E, UniRef:UniRef100_Q2FKQ1, UniRef:UniRef50_Q6GKU0, UniRef:UniRef90_Q6GKU0 contig_1 cds 7032 9695 + GCA000560365_00006 gyrA DNA gyrase subunit A COG:COG0188, COG:L, EC:5.6.2.2, GO:0003677, GO:0003916, GO:0003918, GO:0005524, GO:0005694, GO:0005737, GO:0006259, GO:0006261, GO:0006265, GO:0009330, GO:0034335, GO:0046677, KEGG:K02469, RefSeq:WP_000819066.1, SO:0001217, UniParc:UPI0000696B5F, UniRef:UniRef100_Q2FKQ0, UniRef:UniRef50_Q2FKQ0, UniRef:UniRef90_Q2FKQ0 contig_1 cds 9782 10594 - GCA000560365_00007 nnrD ADP-dependent (S)-NAD(P)H-hydrate dehydratase COG:COG0063, COG:F, EC:4.2.1.136, GO:0005524, GO:0046496, GO:0052855, GO:0052856, GO:0110051, RefSeq:WP_000449218.1, SO:0001217, UniParc:UPI00000D9B7B, UniRef:UniRef100_Q2G2P8, UniRef:UniRef50_Q2G2P8, UniRef:UniRef90_Q2G2P8 contig_1 cds 10920 12434 + GCA000560365_00008 hutH histidine ammonia-lyase COG:COG2986, COG:E, EC:4.3.1.3, GO:0004397, GO:0005737, GO:0006548, GO:0019556, GO:0019557, KEGG:K01745, RefSeq:WP_000177464.1, SO:0001217, UniParc:UPI0000054993, UniRef:UniRef100_Q2G2P7, UniRef:UniRef50_P10944, UniRef:UniRef90_P64415 contig_1 ncRNA-region 12514 12723 + T-box leader RFAM:RF00230, SO:0000140 contig_1 cds 12813 14099 + GCA000560365_00009 serS serine--tRNA ligase COG:COG0172, COG:J, EC:6.1.1.11, GO:0000166, GO:0004828, GO:0005524, GO:0005737, GO:0006434, GO:0016260, GO:0016740, KEGG:K01875, RefSeq:WP_000884334.1, SO:0001217, UniParc:UPI0000054994, UniRef:UniRef100_P95689, UniRef:UniRef50_P95689, UniRef:UniRef90_P95689 contig_1 cds 14749 15444 + GCA000560365_00010 azlC Branched-chain amino acid ABC transporter permease COG:COG1296, COG:E, KEGG:K26605, RefSeq:WP_000207105.1, SO:0001217, UniParc:UPI0000696B60, UniRef:UniRef100_Q2G2P6, UniRef:UniRef50_Q2G2P6, UniRef:UniRef90_Q2G2P6 contig_1 cds 15441 15770 + GCA000560365_00011 azlD2 AzlD domain-containing protein COG:COG4392, COG:E, RefSeq:WP_000628050.1, SO:0001217, UniParc:UPI0000054996, UniRef:UniRef100_Q2G2T5, UniRef:UniRef50_Q2G2T5, UniRef:UniRef90_Q2G2T5 contig_1 ncRNA-region 15975 16073 + SAM riboswitch aptamer (S box leader) RFAM:RF00162, SO:0000140 contig_1 cds 16133 17101 + GCA000560365_00012 mET2 Alpha/beta fold hydrolase COG:COG2021, COG:E, RefSeq:WP_000186481.1, SO:0001217, UniParc:UPI0000696B61, UniRef:UniRef100_Q2G2T4, UniRef:UniRef50_A0A0Z4IRW6, UniRef:UniRef90_A0A0Z4IRW6 contig_1 cds 17407 18330 + GCA000560365_00013 yybS DUF2232 domain-containing protein COG:COG4241, COG:S, RefSeq:WP_000491722.1, SO:0001217, UniParc:UPI00004B5A70, UniRef:UniRef100_A0A0H2WXE2, UniRef:UniRef50_Q2G2T2, UniRef:UniRef90_Q2G2T2 contig_1 cds 18345 20312 + GCA000560365_00014 gdpP cyclic-di-AMP phosphodiesterase GdpP BlastRules:WP_001081643, BlastRules:WP_003242517, COG:COG3887, COG:T, EC:3.1.4.59, KEGG:K22927, RefSeq:WP_001081634.1, SO:0001217, UniParc:UPI00004B5A71, UniRef:UniRef100_Q2G2T6, UniRef:UniRef50_A0A389PUT3, UniRef:UniRef90_A0A389PUT3 contig_1 cds 20309 20755 + GCA000560365_00015 rplI 50S ribosomal protein L9 COG:COG0359, COG:J, GO:0003735, GO:0005840, GO:0006412, GO:0019843, GO:1990904, RefSeq:WP_000864305.1, SO:0001217, UniParc:UPI0000134207, UniRef:UniRef100_Q2FKP1, UniRef:UniRef50_B9DPY3, UniRef:UniRef90_Q2FKP1 contig_1 cds 20787 22187 + GCA000560365_00016 dnaB replicative DNA helicase COG:COG0305, COG:L, EC:3.6.4.12, EC:5.6.2.3, GO:0003677, GO:0003678, GO:0005524, GO:0006260, KEGG:K02314, RefSeq:WP_000375647.1, SO:0001217, UniParc:UPI00000D7863, UniRef:UniRef100_A0A7Z7QW95, UniRef:UniRef50_A0A5R9B465, UniRef:UniRef90_A0A5R9B465 contig_1 cds 22465 23748 + GCA000560365_00017 purA adenylosuccinate synthase COG:COG0104, COG:F, EC:6.3.4.4, GO:0000287, GO:0004019, GO:0005525, GO:0005737, GO:0006164, GO:0044208, GO:0046040, KEGG:K01939, RefSeq:WP_000095327.1, SO:0001217, UniParc:UPI000005499C, UniRef:UniRef100_Q5HJX8, UniRef:UniRef50_Q03ET4, UniRef:UniRef90_Q5HK16 contig_1 tRNA 24178 24252 + GCA000560365_00018 trnE tRNA-Glu(ttc) SO:0000259 contig_1 tRNA 24260 24332 + GCA000560365_00019 trnD tRNA-Asp(gtc) SO:0000256 contig_1 cds 24952 25653 + GCA000560365_00020 yycF response regulator YycF COG:COG0745, COG:TK, GO:0000156, GO:0000976, GO:0005829, GO:0006355, GO:0032993, RefSeq:WP_000101976.1, SO:0001217, UniParc:UPI00000D7820, UniRef:UniRef100_Q2G2U6, UniRef:UniRef50_P37478, UniRef:UniRef90_Q2G2U6 contig_1 cds 25666 27492 + GCA000560365_00021 walK cell wall metabolism sensor histidine kinase WalK COG:COG5002, COG:T, EC:2.7.13.3, GO:0000155, GO:0000156, GO:0005524, GO:0005886, GO:0006355, GO:0007165, GO:0007234, GO:0016020, GO:0016310, GO:0030295, RefSeq:WP_000871607.1, SO:0001217, UniParc:UPI000005499E, UniRef:UniRef100_Q2G2U4, UniRef:UniRef50_Q2G2U4, UniRef:UniRef90_Q2G2U4 contig_1 cds 27485 28819 + GCA000560365_00022 yycH Regulatory protein YycH domain-containing protein RefSeq:WP_001060131.1, SO:0001217, UniParc:UPI00004B5A73, UniRef:UniRef100_Q2G2U3, UniRef:UniRef90_A0A6B1RUA2 contig_1 cds 28820 29608 + GCA000560365_00023 yycI Regulatory protein YycH-like domain-containing protein COG:COG4853, COG:T, RefSeq:WP_001104172.1, SO:0001217, UniParc:UPI00000549A0, UniRef:UniRef100_Q2G2U2, UniRef:UniRef50_Q2G2U2, UniRef:UniRef90_Q2G2U2 contig_1 cds 29998 30798 + GCA000560365_00024 Metallo-beta-lactamase domain-containing protein RefSeq:WP_000088648.1, SO:0001217, UniParc:UPI00000549A1, UniRef:UniRef100_Q2G2U5, UniRef:UniRef90_Q2G2U5 contig_1 cds 31026 33344 + GCA000560365_00025 adsA LPXTG-anchored adenosine synthase AdsA BlastRules:WP_000645780, COG:COG0737, COG:FV, RefSeq:WP_000645780.1, SO:0001217, UniParc:UPI000005230E, UniRef:UniRef100_Q2G253, UniRef:UniRef50_A0AAE8TKC7, UniRef:UniRef90_A0AAE8TKC7 contig_1 cds 33712 34191 + GCA000560365_00026 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH COG:COG1576, COG:J, EC:2.1.1.177, GO:0005737, GO:0006364, GO:0008168, GO:0070038, KEGG:K00783, RefSeq:WP_000704775.1, SO:0001217, UniParc:UPI0000006C89, UniRef:UniRef100_Q2G252, UniRef:UniRef50_Q45601, UniRef:UniRef90_Q2G252 contig_1 cds 34513 35769 + GCA000560365_00027 Protein NO VEIN, C-terminal RefSeq:WP_000566670.1, SO:0001217, UniParc:UPI00000D9B85, UniRef:UniRef100_Q5HK24, UniRef:UniRef50_I2FI09, UniRef:UniRef90_I2FI09 contig_1 cds 35877 36551 - GCA000560365_00028 tnp IS6 family IS257R1 transposase COG:COG3316, COG:X, GO:0003677, GO:0004803, GO:0006310, GO:0015074, GO:0032196, IS:IS257R1, RefSeq:WP_001105956.1, SO:0001217, UniParc:UPI00015FD75D, UniRef:UniRef100_D2J799, UniRef:UniRef50_P0C1L0, UniRef:UniRef90_P0C1L0 contig_1 cds 36809 36976 + GCA000560365_00029 pksG hydroxymethylglutaryl-CoA synthase COG:COG3425, COG:I, EC:2.3.3.10, GO:0004421, KEGG:K01641, RefSeq:WP_000894158.1, SO:0001217, UniParc:UPI00000D76B1, UniRef:UniRef100_Q5HK27, UniRef:UniRef50_R3WMN8, UniRef:UniRef90_E0D4Z2 contig_1 cds 37813 38556 + GCA000560365_00030 ugpQ Glycerophosphoryl diester phosphodiesterase COG:COG0584, COG:I, RefSeq:WP_000958858.1, SO:0001217, UniParc:UPI0000006C77, UniRef:UniRef100_Q5HK29, UniRef:UniRef50_S2XRR6, UniRef:UniRef90_A0A386R0S6 contig_1 cds 38653 39081 + GCA000560365_00031 maoC Acyl dehydratase COG:COG2030, COG:I, RefSeq:WP_000872606.1, SO:0001217, UniParc:UPI0000006C78, UniRef:UniRef100_Q5HK30, UniRef:UniRef50_P96670, UniRef:UniRef90_A0AAJ5CUA4 contig_1 cds 39127 41133 - GCA000560365_00032 mecA PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA COG:COG0768, COG:DM, EC:3.4.16.4, GO:0008658, GO:0046677, KEGG:K02545, NCBIProtein:WP_000721310.1, RefSeq:WP_000721310.1, SO:0001217, UniParc:UPI00000DA0B7, UniRef:UniRef100_Q5HK31, UniRef:UniRef50_P07944, UniRef:UniRef90_Q93IC2 contig_1 cds 41233 42219 + GCA000560365_00033 mecR1 beta-lactam sensor/signal transducer MecR1 NCBIProtein:WP_000952923.1, RefSeq:WP_001549960.1, SO:0001217, UniParc:UPI00000D7692, UniRef:UniRef100_D9Z681, UniRef:UniRef50_D9Z681, UniRef:UniRef90_D9Z681 contig_1 cds 42191 42451 + GCA000560365_00034 Type I restriction-modification system, restriction subunit R RefSeq:WP_001549961.1, SO:0001217, UniParc:UPI00004B5A75, UniRef:UniRef100_A0A1W5ZMK8, UniRef:UniRef50_A0A1W5ZMK8, UniRef:UniRef90_A0A1W5ZMK8 contig_1 cds 42442 43965 - GCA000560365_00035 tnp IS1182 family transposase COG:COG3666, COG:X, GO:0004803, KEGG:K07487, SO:0001217, UniParc:UPI00000D7792, UniRef:UniRef100_Q3YK41, UniRef:UniRef50_A0A9P2Z0V2, UniRef:UniRef90_Q3YK41 contig_1 cds 44101 44607 - GCA000560365_00036 Ribosomal RNA large subunit methyltransferase e COG:COG4333, COG:S, RefSeq:WP_031808128.1, SO:0001217, UniParc:UPI00044C9331, UniRef:UniRef100_UPI00044C9331, UniRef:UniRef50_A0A6B9V013, UniRef:UniRef90_M1XJN4 contig_1 cds 44622 44933 - GCA000560365_00037 Pyridoxal phosphate-dependent enzyme RefSeq:WP_000700851.1, SO:0001217, UniParc:UPI00000D76ED, UniRef:UniRef100_A0A060PLE8, UniRef:UniRef50_A0A0H2VE41, UniRef:UniRef90_A0A060PLE8 contig_1 cds 44935 45027 - GCA000560365_00038 Phage protein SO:0001217, UniParc:UPI00015FD6DD, UniRef:UniRef100_U5NZD5, UniRef:UniRef50_X5IHY2, UniRef:UniRef90_U5NZD5 contig_1 cds 45020 45370 - GCA000560365_00039 hypothetical protein PFAM:PF06106.16, RefSeq:WP_000849672.1, SO:0001217, UniParc:UPI00000D779F, UniRef:UniRef100_A0A060PNX9, UniRef:UniRef50_A0A0H2VDZ4, UniRef:UniRef90_A0A0H2VE21 contig_1 cds 45892 47520 - GCA000560365_00040 ccrB cassette chromosome recombinase CcrB COG:COG1961, COG:L, GO:0006310, GO:0009009, KEGG:K06400, RefSeq:WP_001186608.1, SO:0001217, UniParc:UPI00001833ED, UniRef:UniRef100_Q83ZD2, UniRef:UniRef50_M1XHI0, UniRef:UniRef90_M1XHI0 contig_1 cds 47542 48891 - GCA000560365_00041 ccrA cassette chromosome recombinase CcrA COG:COG1961, COG:L, GO:0006310, GO:0009009, KEGG:K06400, RefSeq:WP_000815640.1, SO:0001217, UniParc:UPI00001833EC, UniRef:UniRef100_G5EL93, UniRef:UniRef50_A0A1S2MMY8, UniRef:UniRef90_A5YT64 contig_1 cds 49125 50912 - GCA000560365_00042 cch1 cassette chromosome replicative helicase GO:0043138, RefSeq:WP_000122620.1, SO:0001217, UniParc:UPI00000D9B8A, UniRef:UniRef100_M1XH74, UniRef:UniRef50_A0A0H2VE26, UniRef:UniRef90_A0A221KKM5 contig_1 cds 50912 51202 - GCA000560365_00043 ssb cassette chromosome ssDNA-binding protein RefSeq:WP_001036438.1, SO:0001217, UniParc:UPI00000D9B8B, UniRef:UniRef100_D9Z688, UniRef:UniRef50_A0A1B1UYE3, UniRef:UniRef90_D9Z688 contig_1 cds 51341 52390 + GCA000560365_00044 ACP synthase RefSeq:WP_000613248.1, SO:0001217, UniParc:UPI00000D77AC, UniRef:UniRef100_A0A168PIJ2, UniRef:UniRef50_G5JK78, UniRef:UniRef90_A0A168PIJ2 contig_1 cds 53063 54553 + GCA000560365_00045 Transcriptional regulator RefSeq:WP_000554504.1, SO:0001217, UniParc:UPI00000D7890, UniRef:UniRef100_D9Z690, UniRef:UniRef50_G5JK79, UniRef:UniRef90_D9Z690 contig_1 cds 55177 56181 - GCA000560365_00046 Rhodanese domain-containing protein SO:0001217, UniParc:UPI00000D7868, UniRef:UniRef100_A0A1W5ZMM1, UniRef:UniRef50_D9Z6D1, UniRef:UniRef90_D9Z6D1 contig_1 cds 56434 56805 + GCA000560365_00047 5-methylcytosine-specific restriction enzyme a RefSeq:WP_001549968.1, SO:0001217, UniParc:UPI00000D9B8D, UniRef:UniRef100_A0A1W5ZMN8, UniRef:UniRef50_M1XJK9, UniRef:UniRef90_M1XJK9 contig_1 cds 56934 57554 + GCA000560365_00048 Restriction endonuclease RefSeq:WP_000673114.1, SO:0001217, UniParc:UPI00000D773F, UniRef:UniRef100_A0A1W5ZMN6, UniRef:UniRef50_A0AAI8DKK5, UniRef:UniRef90_A0AAI8DKK5 contig_1 cds 58471 58641 - GCA000560365_00049 Phage protein RefSeq:WP_001141152.1, SO:0001217, UniParc:UPI00015FD6DF, UniRef:UniRef100_U5NZA1, UniRef:UniRef50_U5NZA1, UniRef:UniRef90_U5NZA1 contig_1 cds 59043 60008 + GCA000560365_00050 HNH nuclease domain-containing protein KEGG:K07454, RefSeq:WP_000027972.1, SO:0001217, UniParc:UPI0000696B68, UniRef:UniRef100_A0A161JQX5, UniRef:UniRef50_A0A161JQX5, UniRef:UniRef90_A0A161JQX5 contig_1 cds 60388 60717 + GCA000560365_00051 hypothetical protein RefSeq:WP_000124775.1, SO:0001217, UniParc:UPI0000696B6A, UniRef:UniRef100_A0A169SZA9, UniRef:UniRef50_A0A169SZA9, UniRef:UniRef90_A0A169SZA9 contig_1 cds 60794 61153 - GCA000560365_00052 DUF4870 domain-containing protein RefSeq:WP_000432278.1, SO:0001217, UniParc:UPI0001EFF132, UniRef:UniRef100_A0A169SZC0, UniRef:UniRef50_A0A0H2XEJ2, UniRef:UniRef90_A0A0H2XEJ2 contig_1 cds 61724 62533 - GCA000560365_00053 IS3 family transposase GO:0004803, SO:0001217, UniParc:UPI00015FD6E2, UniRef:UniRef100_A0A844RG85, UniRef:UniRef50_Q0GQB4, UniRef:UniRef90_A0A2R3SYR0 contig_1 ncRNA 61781 61878 + GCA000560365_00054 rli23 Listeria snRNA rli23 RFAM:RF01458, SO:0000655 contig_1 cds 63046 63543 - GCA000560365_00055 rimL GNAT family N-acetyltransferase COG:COG1670, COG:JO, RefSeq:WP_000776433.1, SO:0001217, UniParc:UPI00000E4C62, UniRef:UniRef100_A0A169SZH3, UniRef:UniRef50_A0A0D0SMX0, UniRef:UniRef90_A0A418J858 contig_1 cds 64041 65168 + GCA000560365_00056 Alcohol dehydrogenase RefSeq:WP_031808129.1, SO:0001217, UniParc:UPI00044DB804, UniRef:UniRef100_UPI00044DB804, UniRef:UniRef50_G9QHN4, UniRef:UniRef90_A0A6B9V093 contig_1 ncRNA-region 65199 65300 - azaaromatic riboswitch aptamer (yjdF RNA) RFAM:RF01764, SO:0000035 contig_1 cds 65423 65647 - GCA000560365_00057 Transcriptional regulator RefSeq:WP_001015130.1, SO:0001217, UniParc:UPI00015FD6E3, UniRef:UniRef100_A0A161JQX9, UniRef:UniRef50_A0A6N0I2N9, UniRef:UniRef90_A0A161JQX9 contig_1 cds 65661 66164 - GCA000560365_00058 Ribosomal RNA large subunit methyltransferase e COG:COG4333, COG:S, RefSeq:WP_001092187.1, SO:0001217, UniParc:UPI0000696B6F, UniRef:UniRef100_A0A161JQQ7, UniRef:UniRef50_A0A6B9V013, UniRef:UniRef90_M1XJN4 contig_1 cds 66180 66491 - GCA000560365_00059 Pyridoxal phosphate-dependent enzyme RefSeq:WP_000700852.1, SO:0001217, UniParc:UPI0000696B70, UniRef:UniRef100_U5NZ17, UniRef:UniRef50_A0A0H2VE41, UniRef:UniRef90_A0A221KKM4 contig_1 cds 66493 66585 - GCA000560365_00060 hypothetical protein SO:0001217, UniParc:UPI00000E5500, UniRef:UniRef100_U5NZF6, UniRef:UniRef50_Q5HK49, UniRef:UniRef90_U5NZF6 contig_1 cds 66578 66928 - GCA000560365_00061 hypothetical protein PFAM:PF06106.16, RefSeq:WP_000859159.1, SO:0001217, UniParc:UPI0000696B71, UniRef:UniRef100_A0A169SZN4, UniRef:UniRef50_A0A0H2VDZ4, UniRef:UniRef90_A0A7Z1SB89 contig_1 cds 67885 68739 + GCA000560365_00062 tnp IS3 family transposase ORF B GO:0004803, SO:0001217, UniRef:UniRef50_R2RXM0, UniRef:UniRef90_Q3YK49 contig_1 ncRNA 68531 68628 - GCA000560365_00063 rli23 Listeria snRNA rli23 RFAM:RF01458, SO:0000655 contig_1 cds 68839 69768 - GCA000560365_00064 arcC carbamate kinase COG:COG0549, COG:E, EC:2.7.2.2, GO:0005524, GO:0005829, GO:0006520, GO:0008804, GO:0019546, RefSeq:WP_000036757.1, SO:0001217, UniParc:UPI0000696B73, UniRef:UniRef100_Q2FKJ8, UniRef:UniRef50_Q4L9V7, UniRef:UniRef90_Q8CU42 contig_1 cds 69788 70786 - GCA000560365_00065 argF ornithine carbamoyltransferase COG:COG0078, COG:E, EC:2.1.3.3, GO:0004585, GO:0005737, GO:0006526, GO:0016597, GO:0019240, GO:0042450, RefSeq:WP_000793596.1, SO:0001217, UniParc:UPI00000E4C89, UniRef:UniRef100_Q8CU41, UniRef:UniRef50_P08308, UniRef:UniRef90_Q8CU41 contig_1 cds 70824 71513 - GCA000560365_00066 arcR HTH-type transcriptional regulator ArcR COG:COG0664, COG:T, KEGG:K21828, RefSeq:WP_000272781.1, SO:0001217, UniParc:UPI000003B4ED, UniRef:UniRef100_E9KNS2, UniRef:UniRef50_A0A380FVB6, UniRef:UniRef90_A0A4U9TT91 contig_1 cds 71555 72976 - GCA000560365_00067 arcD arginine-ornithine antiporter COG:COG0531, COG:E, GO:0005886, GO:0006527, GO:0043858, GO:1903826, RefSeq:WP_000344142.1, SO:0001217, UniParc:UPI000003B4EC, UniRef:UniRef100_A0A918RMY5, UniRef:UniRef50_J9W5S1, UniRef:UniRef90_A0A0D6XQA8 contig_1 cds 73062 74297 - GCA000560365_00068 arcA arginine deiminase COG:COG2235, COG:E, EC:3.5.3.6, GO:0005737, GO:0016990, GO:0019546, GO:0019547, RefSeq:WP_000249804.1, SO:0001217, UniParc:UPI0000696B74, UniRef:UniRef100_E9KNS4, UniRef:UniRef50_O86131, UniRef:UniRef90_Q8CQG5 contig_1 cds 74566 75012 - GCA000560365_00069 argR Arginine repressor COG:COG1438, COG:K, KEGG:K03402, RefSeq:WP_000711814.1, SO:0001217, UniParc:UPI0000696B75, UniRef:UniRef100_U5NW14, UniRef:UniRef50_A0A0D6XNL2, UniRef:UniRef90_U5NW14 contig_1 cds 75514 75945 + GCA000560365_00070 uspA UspA domain-containing protein COG:COG0589, COG:T, RefSeq:WP_000475805.1, SO:0001217, UniParc:UPI000003B4E9, UniRef:UniRef100_U6C408, UniRef:UniRef50_U6C408, UniRef:UniRef90_U6C408 contig_1 cds 76218 76463 + GCA000560365_00071 IS6 family transposase SO:0001217, UniRef:UniRef50_A0A133S0U9, UniRef:UniRef90_A0A133S0U9 contig_1 cds 77078 77893 + GCA000560365_00072 Lysophospholipase RefSeq:WP_000558975.1, SO:0001217, UniParc:UPI000003B9D2, UniRef:UniRef100_A0A3G1RLK6, UniRef:UniRef50_A0A0D0SKE5, UniRef:UniRef90_A0A3G1RLU2 contig_1 cds 78320 79393 + GCA000560365_00073 tnp IS110 family ISSep2 transposase COG:COG3547, COG:X, GO:0004803, IS:ISSep2, SO:0001217, UniParc:UPI00024E49A6, UniRef:UniRef100_A0A221KKV0, UniRef:UniRef50_U6C1M0, UniRef:UniRef90_U6C1M0 contig_1 cds 79653 80345 + GCA000560365_00074 ubiE Class I SAM-dependent methyltransferase COG:COG2226, COG:HJ, RefSeq:WP_000169584.1, SO:0001217, UniParc:UPI00015FD6E8, UniRef:UniRef100_A0A3G1RMQ0, UniRef:UniRef50_A0A380FWJ4, UniRef:UniRef90_A0AAX0ZEX8 contig_1 cds 80342 81895 + GCA000560365_00075 Peptide ABC transporter peptide-binding protein RefSeq:WP_001224176.1, SO:0001217, UniParc:UPI0000696B78, UniRef:UniRef100_U6C3J8, UniRef:UniRef50_A0A5B2Z578, UniRef:UniRef90_U6C3J8 contig_1 cds 81898 82854 + GCA000560365_00076 Oligopeptide permease, channel-forming protein RefSeq:WP_000920052.1, SO:0001217, UniParc:UPI000003B6A9, UniRef:UniRef100_U6C414, UniRef:UniRef50_Q4LA68, UniRef:UniRef90_U6C3L4 contig_1 cds 82854 83621 + GCA000560365_00077 dppC ABC transmembrane type-1 domain-containing protein COG:COG1173, COG:EP, RefSeq:WP_000760756.1, SO:0001217, UniParc:UPI0000696B79, UniRef:UniRef100_U6C1K7, UniRef:UniRef50_A0A853V2J3, UniRef:UniRef90_A0A2K0AXZ2 contig_1 cds 83588 84355 + GCA000560365_00078 ABC transporter RefSeq:WP_000073898.1, SO:0001217, UniParc:UPI0000696B7A, UniRef:UniRef100_A0A3G1RMI9, UniRef:UniRef50_A0A380FWY4, UniRef:UniRef90_A0A3G1RMI9 contig_1 cds 84348 84983 + GCA000560365_00079 ABC transporter ATP-binding protein RefSeq:WP_000912324.1, SO:0001217, UniParc:UPI0000696B7B, UniRef:UniRef100_A0A3G1RMG9, UniRef:UniRef50_A0A380FXX1, UniRef:UniRef90_A0A221KKV6 contig_1 cds 86003 88066 + GCA000560365_00080 copB putative copper-transporting P-type ATPase B COG:COG2217, COG:P, EC:7.2.2.8, GO:0005507, GO:0005524, GO:0005886, GO:0016887, GO:0043682, GO:0055070, GO:0140581, RefSeq:WP_001063476.1, SO:0001217, UniParc:UPI0001EFF118, UniRef:UniRef100_Q2FKI2, UniRef:UniRef50_Q5HKB0, UniRef:UniRef90_Q5HKB0 contig_1 cds 88084 88629 + GCA000560365_00081 DUF1541 domain-containing protein RefSeq:WP_000592150.1, SO:0001217, UniParc:UPI0000696B7D, UniRef:UniRef100_U5NZ39, UniRef:UniRef50_A0A0B5KSV7, UniRef:UniRef90_A0A0B5KSV7 contig_1 cds 89394 91145 + GCA000560365_00082 TIGR04141 family sporadically distributed protein RefSeq:WP_000700191.1, SO:0001217, UniParc:UPI0000696B7E, UniRef:UniRef100_A0A5P6T026, UniRef:UniRef50_Q2G2E9, UniRef:UniRef90_Q2G2E9 contig_1 cds 91239 91691 - GCA000560365_00083 dus putative tRNA-dihydrouridine synthase COG:COG0042, COG:J, EC:1.3.1.-, GO:0000049, GO:0017150, GO:0050660, RefSeq:WP_000048258.1, SO:0001217, UniParc:UPI0000054A9F, UniRef:UniRef100_Q2G2E8, UniRef:UniRef50_O31546, UniRef:UniRef90_Q5HJT5 contig_1 cds 91906 92661 - GCA000560365_00084 tauE putative membrane transporter protein COG:COG0730, COG:P, RefSeq:WP_000355845.1, SO:0001217, UniParc:UPI0000054A9E, UniRef:UniRef100_Q2G2E7, UniRef:UniRef50_A0A0H2G7M4, UniRef:UniRef90_A0A0H2G7M4 contig_1 cds 92661 92921 - GCA000560365_00085 cstR persulfide-sensing transcriptional repressor CstR BlastRules:WP_001105087, RefSeq:WP_001105087.1, SO:0001217, UniParc:UPI00000D9B94, UniRef:UniRef100_Q2G1R8, UniRef:UniRef50_Q2G1R8, UniRef:UniRef90_Q2G1R8 contig_1 cds 93058 94125 + GCA000560365_00086 cstA persulfide response sulfurtransferase CstA BlastRules:WP_001837745, COG:C, COG:COG2210, RefSeq:WP_000816129.1, SO:0001217, UniParc:UPI0000054A9C, UniRef:UniRef100_Q2G1R7, UniRef:UniRef50_B9DJV1, UniRef:UniRef90_A0A380DHL7 contig_1 cds 94156 95490 + GCA000560365_00087 cstB persulfide dioxygenase-sulfurtransferase CstB BlastRules:WP_000465472, COG:COG0607, COG:P, RefSeq:WP_000465472.1, SO:0001217, UniParc:UPI00000D7846, UniRef:UniRef100_G5ELA4, UniRef:UniRef50_G5ELA4, UniRef:UniRef90_G5ELA4 contig_1 cds 95509 95763 + GCA000560365_00088 fadH2 FAD-dependent pyridine nucleotide-disulfide oxidoreductase COG:COG0446, COG:I, SO:0001217, UniParc:UPI00024E41D9, UniRef:UniRef100_Q2G1R5, UniRef:UniRef50_A0A1D4R4A9, UniRef:UniRef90_A0A380DIU2 contig_1 cds 96013 96702 + GCA000560365_00089 fadH2 FAD-dependent pyridine nucleotide-disulfide oxidoreductase COG:COG0446, COG:I, SO:0001217, UniParc:UPI0001B3B48D, UniRef:UniRef100_Q2G1R5, UniRef:UniRef50_A0A1D4R4A9, UniRef:UniRef90_A0A380DIU2 contig_1 cds 97369 98355 - GCA000560365_00090 dus putative tRNA-dihydrouridine synthase COG:COG0042, COG:J, EC:1.3.1.-, GO:0000049, GO:0017150, GO:0050660, RefSeq:WP_000662031.1, SO:0001217, UniParc:UPI0000054A97, UniRef:UniRef100_Q5HJT5, UniRef:UniRef50_O31546, UniRef:UniRef90_Q5HJT5 contig_1 cds 98916 99212 + GCA000560365_00091 tfoX TfoX N-terminal domain-containing protein RefSeq:WP_000201638.1, SO:0001217, UniParc:UPI0000696B7F, UniRef:UniRef100_A0A5A8VU47, UniRef:UniRef50_Q2G1R1, UniRef:UniRef90_Q2G1R1 contig_1 cds 99284 100504 - GCA000560365_00092 Major facilitator superfamily (MFS) profile domain-containing protein RefSeq:WP_000130765.1, SO:0001217, UniParc:UPI0000696B80, UniRef:UniRef100_A0A0E8JC85, UniRef:UniRef50_Q2G1R0, UniRef:UniRef90_Q2G1R0 contig_1 cds 100497 100982 - GCA000560365_00093 Flavodoxin SO:0001217, UniParc:UPI000157444E, UniRef:UniRef100_A0A2C9TJP4, UniRef:UniRef50_A0A9Q9BMX3, UniRef:UniRef90_A0A2C9TJP4 contig_1 cds 101160 102020 + GCA000560365_00094 HTH lysR-type domain-containing protein RefSeq:WP_001052510.1, SO:0001217, UniParc:UPI00000D9B98, UniRef:UniRef100_Q2G1Q8, UniRef:UniRef50_W1Y6F5, UniRef:UniRef90_Q2G1Q8 contig_1 cds 102375 102908 - GCA000560365_00095 DUF4865 domain-containing protein RefSeq:WP_000543163.1, SO:0001217, UniParc:UPI0000054A91, UniRef:UniRef100_Q2G1Q7, UniRef:UniRef50_Q2G1Q7, UniRef:UniRef90_Q2G1Q7 contig_1 cds 103008 103742 + GCA000560365_00096 HTH lysR-type domain-containing protein SO:0001217, UniParc:UPI00000D9B99, UniRef:UniRef100_A0A2C9TJ04, UniRef:UniRef50_Q2G1Q6, UniRef:UniRef90_Q2G1Q6 contig_1 cds 104176 104778 + GCA000560365_00097 DUF5079 domain-containing protein RefSeq:WP_000908952.1, SO:0001217, UniParc:UPI00004B5A84, UniRef:UniRef100_Q2G1Q5, UniRef:UniRef50_A0A6G4N7I9, UniRef:UniRef90_A0A6G4N7I9 contig_1 cds 105045 108197 + GCA000560365_00098 dNA2 RecBCD enzyme subunit RecD COG:COG1112, COG:L, RefSeq:WP_000080557.1, SO:0001217, UniParc:UPI0000696B82, UniRef:UniRef100_A0A1S5ZQD2, UniRef:UniRef50_Q4A109, UniRef:UniRef90_A0A6N3FDN4 contig_1 cds 108254 108736 + GCA000560365_00099 DUF3278 domain-containing protein RefSeq:WP_000410568.1, SO:0001217, UniParc:UPI0000054A8C, UniRef:UniRef100_Q2G1Q3, UniRef:UniRef50_Q2G1Q3, UniRef:UniRef90_Q2G1Q3 contig_1 cds 108941 109927 + GCA000560365_00100 plc 1-phosphatidylinositol phosphodiesterase EC:4.6.1.13, GO:0004436, GO:0005576, GO:0008081, GO:0016042, RefSeq:WP_000710576.1, SO:0001217, UniParc:UPI0000054A8B, UniRef:UniRef100_Q2G1Q2, UniRef:UniRef50_Q2G1Q2, UniRef:UniRef90_Q2G1Q2 contig_1 cds 110148 110918 + GCA000560365_00101 putative lipoprotein SAS0072 GO:0005886, RefSeq:WP_000977774.1, SO:0001217, UniParc:UPI0000054A8A, UniRef:UniRef100_Q2G1Q1, UniRef:UniRef50_Q2G1Q1, UniRef:UniRef90_Q2G1Q1 contig_1 cds 110937 111740 + GCA000560365_00102 putative lipoprotein MW0072 GO:0005886, SO:0001217, UniParc:UPI0000054A89, UniRef:UniRef100_A0A133PUY2, UniRef:UniRef50_Q2YVQ6, UniRef:UniRef90_Q8NYU1 contig_1 cds 111804 112574 + GCA000560365_00103 putative lipoprotein SAUSA300_0102 GO:0005886, RefSeq:WP_000977781.1, SO:0001217, UniParc:UPI0000054A88, UniRef:UniRef100_Q2G1P9, UniRef:UniRef50_Q2G1P9, UniRef:UniRef90_Q2G1P9 contig_1 cds 112641 113408 + GCA000560365_00104 putative lipoprotein SACOL0083 GO:0005886, RefSeq:WP_000826311.1, SO:0001217, UniParc:UPI0000054A87, UniRef:UniRef100_Q2G1P8, UniRef:UniRef50_Q2G1Q1, UniRef:UniRef90_Q2G1P8 contig_1 cds 113502 115739 + GCA000560365_00105 aryK transcriptional regulator AryK COG:COG3664, COG:G, GO:0003700, GO:0043565, RefSeq:WP_001188495.1, SO:0001217, UniParc:UPI0000054A86, UniRef:UniRef100_Q5HJR8, UniRef:UniRef50_Q5HJR8, UniRef:UniRef90_Q5HJR8 contig_1 cds 115890 117068 + GCA000560365_00106 abgB Peptidase M20 dimerisation domain-containing protein COG:COG1473, COG:R, RefSeq:WP_001075826.1, SO:0001217, UniParc:UPI00004B5A89, UniRef:UniRef100_Q2G1P6, UniRef:UniRef50_A0A380FVH8, UniRef:UniRef90_Q2G1P6 contig_1 cds 117070 118458 + GCA000560365_00107 uhpC Quinolone resistance protein NorB COG:COG2271, COG:G, RefSeq:WP_001006445.1, SO:0001217, UniParc:UPI00004B5A8A, UniRef:UniRef100_A0A0E7VUI8, UniRef:UniRef50_Q2FYJ5, UniRef:UniRef90_Q9F0Z2 contig_1 cds 118951 120618 - GCA000560365_00108 nptA PhoU domain-containing protein COG:COG1283, COG:P, SO:0001217, UniParc:UPI0000054A82, UniRef:UniRef100_Q2G1P4, UniRef:UniRef50_Q2G1P4, UniRef:UniRef90_Q2G1P4 contig_1 cds 120938 122713 - GCA000560365_00109 oleate hydratase COG:COG4716, COG:S, EC:4.2.1.53, GO:0006631, GO:0050151, GO:0071949, RefSeq:WP_000291842.1, SO:0001217, UniParc:UPI00004B5A8D, UniRef:UniRef100_Q2G1P3, UniRef:UniRef50_B5XK69, UniRef:UniRef90_Q2G1P3 contig_1 cds 122887 123759 - GCA000560365_00110 rhaT EamA domain-containing protein COG:COG0697, COG:GER, RefSeq:WP_001038026.1, SO:0001217, UniParc:UPI0000696B83, UniRef:UniRef100_A0A5A8VS45, UniRef:UniRef50_Q2G1P2, UniRef:UniRef90_Q2G1P2 contig_1 cds 123872 125269 + GCA000560365_00111 norG HTH-type transcriptional regulator NorG COG:COG1167, COG:KE, GO:0003677, GO:0003700, GO:0008483, GO:0009058, GO:0030170, GO:1901605, KEGG:K18907, RefSeq:WP_001151814.1, SO:0001217, UniParc:UPI00004B5A8E, UniRef:UniRef100_Q2G1P1, UniRef:UniRef50_Q2G1P1, UniRef:UniRef90_Q2G1P1 contig_1 cds 125459 125932 + GCA000560365_00112 DUF1648 domain-containing protein RefSeq:WP_000036327.1, SO:0001217, UniParc:UPI00004B5A8F, UniRef:UniRef100_Q2G1P0, UniRef:UniRef50_Q2G1P0, UniRef:UniRef90_Q2G1P0 contig_1 cds 126194 127786 + GCA000560365_00113 lldP L-lactate permease COG:C, COG:COG1620, KEGG:K03303, RefSeq:WP_000173902.1, SO:0001217, UniParc:UPI0000054A7C, UniRef:UniRef100_Q2G1N9, UniRef:UniRef50_Q9K5Z9, UniRef:UniRef90_A0A2K4AMZ7 contig_1 cds 128115 129593 - GCA000560365_00114 spa Immunoglobulin G binding protein A precursor GO:0005576, GO:0019865, KEGG:K14196, RefSeq:WP_000728761.1, SO:0001217, UniParc:UPI0002C94430, UniRef:UniRef100_UPI0002C94430, UniRef:UniRef50_P02976, UniRef:UniRef90_P02976, VFDB:VFC0235, VFDB:VFG001313 contig_1 cds 130014 130766 - GCA000560365_00115 sarS HTH-type transcriptional regulator SarS BlastRules:WP_000876756, COG:COG1846, COG:K, GO:0003677, GO:0003700, GO:0005737, GO:0006950, RefSeq:WP_000876756.1, SO:0001217, UniParc:UPI00000D76F7, UniRef:UniRef100_Q2G1N7, UniRef:UniRef50_Q2G1N7, UniRef:UniRef90_Q2G1N7 contig_1 cds 131135 132133 - GCA000560365_00116 fepD staphyloferrin B ABC transporter permease subunit SirC BlastRules:WP_000136636, COG:COG0609, COG:P, RefSeq:WP_000136636.1, SO:0001217, UniParc:UPI00000B6FE6, UniRef:UniRef100_Q2G1N6, UniRef:UniRef50_A0A389V9I4, UniRef:UniRef90_A0A389V9I4 contig_1 cds 132130 133125 - GCA000560365_00117 fepD staphyloferrin B ABC transporter permease subunit SirB BlastRules:WP_000925002, COG:COG0609, COG:P, RefSeq:WP_000924997.1, SO:0001217, UniParc:UPI0000054A78, UniRef:UniRef100_Q2G1N5, UniRef:UniRef50_A0A0H2WZW5, UniRef:UniRef90_A0A0H2WZW5 contig_1 cds 133141 134133 - GCA000560365_00118 fepB staphyloferrin B ABC transporter substrate-binding protein SirA BlastRules:WP_001045111, COG:COG0614, COG:P, RefSeq:WP_001045111.1, SO:0001217, UniParc:UPI00000522E5, UniRef:UniRef100_Q2G1N4, UniRef:UniRef50_S2XE72, UniRef:UniRef90_A0A7U7IE32 contig_1 cds 134364 135344 + GCA000560365_00119 sbnA 2,3-diaminopropionate biosynthesis protein SbnA BlastRules:WP_000570808, COG:COG0031, COG:E, EC:2.5.1.140, GO:0006535, GO:0009058, GO:0016765, GO:0030170, RefSeq:WP_000570808.1, SO:0001217, UniParc:UPI00000D7883, UniRef:UniRef100_Q2G1N3, UniRef:UniRef50_Q2G1N3, UniRef:UniRef90_Q2G1N3 contig_1 cds 135341 136351 + GCA000560365_00120 sbnB N-[(2S)-2-amino-2-carboxyethyl]-L-glutamate dehydrogenase SbnB BlastRules:WP_001078456, COG:COG2423, COG:E, EC:1.5.1.51, GO:0016491, GO:0016639, GO:0019290, KEGG:K21721, RefSeq:WP_001078456.1, SO:0001217, UniParc:UPI00000522AC, UniRef:UniRef100_Q2G1N2, UniRef:UniRef50_Q2G1N2, UniRef:UniRef90_Q2G1N2 contig_1 cds 136372 138126 + GCA000560365_00121 sbnC staphyloferrin B biosynthesis protein SbnC COG:COG4264, COG:P, EC:6.3.2.56, GO:0005524, GO:0016881, GO:0019290, KEGG:K23375, RefSeq:WP_001179384.1, SO:0001217, UniParc:UPI000022FC5D, UniRef:UniRef100_Q2G1N1, UniRef:UniRef50_Q2G1N1, UniRef:UniRef90_Q2G1N1 contig_1 cds 138203 139375 + GCA000560365_00122 sbnD staphyloferrin B export MFS transporter BlastRules:WP_000572580, COG:COG2814, COG:G, GO:0005886, GO:0022857, KEGG:K23361, SO:0001217, UniParc:UPI0002506763, UniRef:UniRef100_A0A380E472, UniRef:UniRef50_Q2G1N0, UniRef:UniRef90_Q2G1N0 contig_1 cds 139365 141101 + GCA000560365_00123 sbnE L-2,3-diaminopropanoate--citrate ligase SbnE BlastRules:WP_001179886, COG:COG4264, COG:P, EC:6.3.2.54, GO:0005524, GO:0016881, GO:0019290, KEGG:K23372, RefSeq:WP_001179888.1, SO:0001217, UniParc:UPI00000D9BAC, UniRef:UniRef100_Q2G1M9, UniRef:UniRef50_Q2G1M9, UniRef:UniRef90_Q2G1M9 contig_1 cds 141082 142860 + GCA000560365_00124 sbnF 3-(L-alanin-3-ylcarbamoyl)-2-[(2-aminoethylcarbamoyl)methyl]-2-hydroxypropanoate synthase SbnF BlastRules:WP_001795559, COG:COG4264, COG:P, EC:6.3.2.55, GO:0005524, GO:0016881, GO:0019290, KEGG:K23374, SO:0001217, UniParc:UPI00004B5A94, UniRef:UniRef100_A0A0D6GJC0, UniRef:UniRef50_Q2G1M8, UniRef:UniRef90_Q2G1M8 contig_1 cds 142832 143611 + GCA000560365_00125 sbnG staphyloferrin B biosynthesis citrate synthase SbnG BlastRules:WP_001549999, COG:COG3836, COG:G, SO:0001217, UniParc:UPI0000054710, UniRef:UniRef100_Q2G1M7, UniRef:UniRef50_Q2G1M7, UniRef:UniRef90_Q2G1M7 contig_1 cds 143611 144813 + GCA000560365_00126 sbnH staphyloferrin B biosynthesis decarboxylase SbnH BlastRules:WP_001223700, COG:COG0019, COG:E, EC:4.1.1.117, GO:0006596, GO:0008836, GO:0009089, GO:0016831, GO:0019290, KEGG:K01586, RefSeq:WP_001223700.1, SO:0001217, UniParc:UPI000005470F, UniRef:UniRef100_Q2G1M6, UniRef:UniRef50_Q2G1M6, UniRef:UniRef90_Q2G1M6 contig_1 cds 144817 145581 + GCA000560365_00127 sbnI L-serine kinase SbnI BlastRules:WP_001015549, COG:COG1475, COG:D, EC:2.7.1.225, GO:0003677, GO:0005524, GO:0005694, GO:0007059, GO:0016301, GO:0016773, GO:0019290, GO:0045881, KEGG:K23371, RefSeq:WP_001015549.1, SO:0001217, UniParc:UPI00000D772E, UniRef:UniRef100_Q2G1M5, UniRef:UniRef50_Q2G1M5, UniRef:UniRef90_Q2G1M5 contig_1 cds 145777 146184 + GCA000560365_00128 MFS transporter RefSeq:WP_000094899.1, SO:0001217, UniParc:UPI00004B5A96, UniRef:UniRef100_Q2G1M3, UniRef:UniRef50_A0AAP8CQG4, UniRef:UniRef90_Q2G1M3 contig_1 cds 146234 146860 + GCA000560365_00129 MFS transporter RefSeq:WP_000414628.1, SO:0001217, UniParc:UPI000005470C, UniRef:UniRef100_Q2G1M2, UniRef:UniRef50_Q2G1M2, UniRef:UniRef90_Q2G1M2 contig_1 cds 147072 147848 + GCA000560365_00130 butA (S)-acetoin forming diacetyl reductase COG:COG1028, COG:I, EC:1.1.1.304, GO:0019152, GO:0045150, GO:0052588, RefSeq:WP_000183771.1, SO:0001217, UniParc:UPI00000D7675, UniRef:UniRef100_Q5HJP2, UniRef:UniRef50_Q5HJP2, UniRef:UniRef90_Q5HJP2 contig_1 cds 148193 149164 + GCA000560365_00131 wcaG NAD-dependent dehydratase COG:COG0451, COG:M, SO:0001217, UniParc:UPI00004B5A97, UniRef:UniRef100_A0A266CPK4, UniRef:UniRef50_Q2MGY5, UniRef:UniRef90_Q2MGY5 contig_1 cds 149127 149819 + GCA000560365_00132 wcaJ Bacterial sugar transferase domain-containing protein COG:COG2148, COG:M, RefSeq:WP_000736084.1, SO:0001217, UniParc:UPI00000D9BB2, UniRef:UniRef100_Q2G287, UniRef:UniRef50_Q2G287, UniRef:UniRef90_Q2G287 contig_1 cds 150029 151195 + GCA000560365_00133 rfaB Exopolysaccharide biosynthesis glycosyltransferase EpsF COG:COG0438, COG:M, RefSeq:WP_000692515.1, SO:0001217, UniParc:UPI0000696B86, UniRef:UniRef100_A0A5A8VQG2, UniRef:UniRef50_A0AAJ4YWB0, UniRef:UniRef90_A0AAJ4YWB0 contig_1 cds 151176 152414 + GCA000560365_00134 O-antigen ligase-related domain-containing protein RefSeq:WP_000431234.1, SO:0001217, UniParc:UPI0000054703, UniRef:UniRef100_Q2G288, UniRef:UniRef50_Q2G288, UniRef:UniRef90_Q2G288 contig_1 cds 152404 153834 + GCA000560365_00135 rfbX Polysaccharide biosynthesis protein C-terminal domain-containing protein COG:COG2244, COG:M, RefSeq:WP_000834084.1, SO:0001217, UniParc:UPI00003D0D8A, UniRef:UniRef100_Q2G262, UniRef:UniRef50_Q2G262, UniRef:UniRef90_Q2G262 contig_1 cds 154102 154701 + GCA000560365_00136 sodM Superoxide dismutase [Mn/Fe] 2 COG:COG0605, COG:P, EC:1.15.1.1, GO:0004784, GO:0005737, GO:0046872, KEGG:K04564, RefSeq:WP_000874681.1, SO:0001217, UniParc:UPI0000054701, UniRef:UniRef100_Q2G261, UniRef:UniRef50_Q2G261, UniRef:UniRef90_Q2G261 contig_1 cds 155069 155794 + GCA000560365_00137 sasD cell-wall-anchored protein SasD BlastRules:WP_070002951, SO:0001217, UniParc:UPI0000052296, UniRef:UniRef100_A0A0D6GL01, UniRef:UniRef50_Q2G260, UniRef:UniRef90_A0A6B0CXZ7 contig_1 cds 155986 156726 - GCA000560365_00138 mngR GntR family transcriptional regulator COG:COG2188, COG:K, RefSeq:WP_000195132.1, SO:0001217, UniParc:UPI00000D9BB7, UniRef:UniRef100_A0A1M3SHM6, UniRef:UniRef50_S2XH22, UniRef:UniRef90_A0A380DIC9 contig_1 cds 156977 157684 + GCA000560365_00139 deoD purine-nucleoside phosphorylase COG:COG0813, COG:F, EC:2.4.2.1, GO:0004731, GO:0006139, KEGG:K03784, RefSeq:WP_000843292.1, SO:0001217, UniParc:UPI00000CAD09, UniRef:UniRef100_Q2G228, UniRef:UniRef50_Q894Z3, UniRef:UniRef90_Q2G228 contig_1 cds 157685 159043 + GCA000560365_00140 tet(38) tetracycline efflux MFS transporter Tet(38) COG:COG2814, COG:G, GO:0008493, GO:0015904, KEGG:K08168, NCBIProtein:WP_001100300.1, SO:0001217, UniParc:UPI00000546FC, UniRef:UniRef100_Q2G226, UniRef:UniRef50_A0A658WD55, UniRef:UniRef90_A0A658WD55 contig_1 cds 159124 159786 + GCA000560365_00141 deoC deoxyribose-phosphate aldolase EC:4.1.2.4, GO:0004139, GO:0005737, GO:0009264, KEGG:K01619, RefSeq:WP_000667275.1, SO:0001217, UniParc:UPI0000696B87, UniRef:UniRef100_A0A5A8W133, UniRef:UniRef50_Q4L819, UniRef:UniRef90_A0A5A8W133 contig_1 cds 159814 160992 + GCA000560365_00142 deoB phosphopentomutase COG:COG1015, COG:G, EC:5.4.2.7, GO:0000287, GO:0005737, GO:0005829, GO:0006015, GO:0006018, GO:0008973, GO:0009117, GO:0030145, GO:0043094, RefSeq:WP_000197806.1, SO:0001217, UniParc:UPI00000D773B, UniRef:UniRef100_Q2G227, UniRef:UniRef50_Q8DQD0, UniRef:UniRef90_Q2G227 contig_1 cds 161123 161938 - GCA000560365_00143 phnE phosphonate ABC transporter, permease protein PhnE COG:COG3639, COG:P, EC:7.3.2.2, GO:0005886, GO:0015416, GO:0015716, GO:0055052, KEGG:K02042, RefSeq:WP_000191092.1, SO:0001217, UniParc:UPI00000546F9, UniRef:UniRef100_Q2G225, UniRef:UniRef50_A0A7Z1N8X5, UniRef:UniRef90_A0A2K4ALN9 contig_1 cds 161935 162735 - GCA000560365_00144 phnE phosphonate ABC transporter, permease protein PhnE COG:COG3639, COG:P, EC:7.3.2.2, GO:0005886, GO:0015416, GO:0015716, GO:0055052, KEGG:K02042, RefSeq:WP_001127689.1, SO:0001217, UniParc:UPI00000546F8, UniRef:UniRef100_Q2G1L9, UniRef:UniRef50_E3EAH8, UniRef:UniRef90_A0A0Z4EPE7 contig_1 cds 162737 163510 - GCA000560365_00145 phnC phosphonate ABC transporter ATP-binding protein COG:COG3638, COG:P, EC:7.3.2.2, GO:0005524, GO:0005886, GO:0015416, GO:0015716, GO:0016020, GO:0016887, RefSeq:WP_000078092.1, SO:0001217, UniParc:UPI00000D77F7, UniRef:UniRef100_Q2G1L8, UniRef:UniRef50_Q2G1L8, UniRef:UniRef90_Q2G1L8 contig_1 cds 163724 164680 - GCA000560365_00146 phnD Phosphonate ABC transporter phosphate-binding periplasmic component COG:COG3221, COG:P, KEGG:K02044, RefSeq:WP_000787672.1, SO:0001217, UniParc:UPI00000546F6, UniRef:UniRef100_Q2G1L7, UniRef:UniRef50_D3EDC2, UniRef:UniRef90_A0A077UPS7 contig_1 cds 164909 166453 + GCA000560365_00147 DNA-binding protein RefSeq:WP_000725596.1, SO:0001217, UniParc:UPI00000546F5, UniRef:UniRef100_Q2G1L6, UniRef:UniRef50_Q2G1L6, UniRef:UniRef90_Q2G1L6 contig_1 cds 166504 168039 + GCA000560365_00148 ushA 2',3'-cyclic-nucleotide 2'-phosphodiesterase COG:COG0737, COG:FV, RefSeq:WP_000065035.1, SO:0001217, UniParc:UPI00004B5A9B, UniRef:UniRef100_Q2G1L5, UniRef:UniRef50_A0A390ZG35, UniRef:UniRef90_A0A390ZG35 contig_1 cds 168387 168485 - GCA000560365_00149 hypothetical protein SO:0001217, UniParc:UPI0002B22E85, UniRef:UniRef100_A0A1D4MRA9, UniRef:UniRef50_A0A1D4MRA9, UniRef:UniRef90_A0A1D4MRA9 contig_1 cds 168699 169184 + GCA000560365_00150 Replication initiation protein, putative RefSeq:WP_001550007.1, SO:0001217, UniParc:UPI000069AA36, UniRef:UniRef100_Q2G1L3, UniRef:UniRef50_A0A9N9KMZ1, UniRef:UniRef90_Q2G1L3 contig_1 cds 169169 169459 + GCA000560365_00151 Truncated replication initiation protein, putative SO:0001217, UniParc:UPI00000D9BC0, UniRef:UniRef100_Q2G1L2, UniRef:UniRef50_A0A141RL29, UniRef:UniRef90_Q2G1L2 contig_1 ncRNA 169819 170087 - GCA000560365_00152 S35 Staphylococcus sRNA 35 (srn_0335) RFAM:RF02894, SO:0000655 contig_1 cds 170436 170657 + GCA000560365_00153 tnp IS200/IS605 family transposase COG:COG1943, COG:X, GO:0004803, RefSeq:WP_001550009.1, SO:0001217, UniParc:UPI00000546EE, UniRef:UniRef100_Q2G1L0, UniRef:UniRef50_E6LCX5, UniRef:UniRef90_A0AAE2ZW92 contig_1 cds 171107 173716 + GCA000560365_00154 adhE bifunctional acetaldehyde-CoA/alcohol dehydrogenase COG:C, COG:COG1454, EC:1.1.1.1, EC:1.2.1.10, GO:0004022, GO:0006066, GO:0015976, GO:0016620, GO:0046872, RefSeq:WP_000955777.1, SO:0001217, UniParc:UPI00004B5A9C, UniRef:UniRef100_Q2G1K9, UniRef:UniRef50_A0A0H2ZM56, UniRef:UniRef90_A0A0U1MVV5 contig_1 cds 174061 174729 + GCA000560365_00155 capA capsular polysaccharide type 5/8 biosynthesis protein CapA BlastRules:WP_000446300, COG:COG3944, COG:M, GO:0000271, GO:0004713, GO:0005351, GO:0005886, GO:0015774, RefSeq:WP_000446299.1, SO:0001217, UniParc:UPI00000546EC, UniRef:UniRef100_P95695, UniRef:UniRef50_P72367, UniRef:UniRef90_P72367 contig_1 cds 174745 175431 + GCA000560365_00156 cap8B type 8 capsular polysaccharide synthesis protein Cap8B BlastRules:WP_000037328, COG:COG0489, COG:D, RefSeq:WP_000037332.1, SO:0001217, UniParc:UPI00000CA9FE, UniRef:UniRef100_Q2G1K7, UniRef:UniRef50_P39851, UniRef:UniRef90_A8YPQ8 contig_1 cds 175434 176198 + GCA000560365_00157 cap8C type 8 capsular polysaccharide synthesis protein Cap8C BlastRules:WP_000565297, COG:COG4464, COG:T, RefSeq:WP_000565302.1, SO:0001217, UniParc:UPI00000546EA, UniRef:UniRef100_Q2G1K6, UniRef:UniRef50_P72369, UniRef:UniRef90_P72369 contig_1 cds 176218 177222 + GCA000560365_00158 nucleoside-diphosphate sugar epimerase/dehydratase SO:0001217, UniRef:UniRef50_UPI000FF5EE58 contig_1 cds 177188 178042 + GCA000560365_00159 flaA1 (pseudo) Polysaccharide biosynthesis protein COG:COG1086, COG:MO, SO:0001217, UniRef:UniRef50_P39853, UniRef:UniRef90_A0AAE8PB03 contig_1 cds 178032 179060 + GCA000560365_00160 cap8E type 8 capsular polysaccharide synthesis protein Cap8E BlastRules:WP_000459062, COG:COG1086, COG:MO, EC:4.2.1.115, EC:5.1.3.-, KEGG:K15894, RefSeq:WP_000459057.1, SO:0001217, UniParc:UPI0000696B88, UniRef:UniRef100_A0A5A8VUN8, UniRef:UniRef50_P95699, UniRef:UniRef90_A0A0Y9S337 contig_1 cds 179073 180182 + GCA000560365_00161 cap8F type 8 capsular polysaccharide synthesis protein Cap8F BlastRules:WP_001028293, COG:COG1898, COG:M, EC:1.1.1.367, KEGG:K19068, RefSeq:WP_001028293.1, SO:0001217, UniParc:UPI00000D9BC5, UniRef:UniRef100_Q2G1K3, UniRef:UniRef50_A0A1V4SI62, UniRef:UniRef90_A0A390ZI88 contig_1 cds 180186 181310 + GCA000560365_00162 cap8G type 8 capsular polysaccharide synthesis protein Cap8G BlastRules:WP_000413169, COG:COG0381, COG:M, EC:5.1.3.14, EC:5.1.3.28, GO:0008761, KEGG:K24258, RefSeq:WP_000413173.1, SO:0001217, UniParc:UPI0000696B89, UniRef:UniRef100_A0A0E8H824, UniRef:UniRef50_A0A9X2B7Q1, UniRef:UniRef90_A0A077UEL0 contig_1 cds 181313 181939 + GCA000560365_00163 wbbJ Acetyltransferase COG:COG0110, COG:R, RefSeq:WP_001216898.1, SO:0001217, UniParc:UPI00000D472C, UniRef:UniRef100_Q2G1K1, UniRef:UniRef50_A0A2K4AME3, UniRef:UniRef90_A0A2K4AME3 contig_1 cds 181944 183053 + GCA000560365_00164 rfaB Capsular biosynthesis protein COG:COG0438, COG:M, RefSeq:WP_001221639.1, SO:0001217, UniParc:UPI00000546E2, UniRef:UniRef100_Q2G1K0, UniRef:UniRef50_D7UYF1, UniRef:UniRef90_A0AAE2ZVF1 contig_1 cds 183067 184233 + GCA000560365_00165 rfaL Capsular polysaccharide synthesis enzyme Cap5J COG:COG3307, COG:M, RefSeq:WP_000668180.1, SO:0001217, UniParc:UPI00000546E1, UniRef:UniRef100_Q2G1J9, UniRef:UniRef50_A0A391FAD1, UniRef:UniRef90_A0A391FAD1 contig_1 cds 184226 185431 + GCA000560365_00166 Cap5K RefSeq:WP_001085819.1, SO:0001217, UniParc:UPI00004B5A9D, UniRef:UniRef100_Q2G1J8, UniRef:UniRef50_P95704, UniRef:UniRef90_P95704 contig_1 cds 185432 186637 + GCA000560365_00167 cap8L type 8 capsular polysaccharide synthesis protein Cap8L BlastRules:WP_001291010, COG:COG0438, COG:M, KEGG:K03208, RefSeq:WP_001291022.1, SO:0001217, UniParc:UPI00000546DF, UniRef:UniRef100_Q2G1J7, UniRef:UniRef50_P95705, UniRef:UniRef90_P95705 contig_1 cds 186648 187205 + GCA000560365_00168 cap8M type 8 capsular polysaccharide synthesis protein Cap8M BlastRules:WP_000825101, COG:COG2148, COG:M, KEGG:K13012, RefSeq:WP_000825098.1, SO:0001217, UniParc:UPI00000522E7, UniRef:UniRef100_Q2G1J6, UniRef:UniRef50_A0A2D7LN21, UniRef:UniRef90_A0A7U7JS51 contig_1 cds 187205 188092 + GCA000560365_00169 capN capsular polysaccharide type 5/8 biosynthesis epimerase CapN BlastRules:WP_001230668, COG:COG0451, COG:M, RefSeq:WP_001230670.1, SO:0001217, UniParc:UPI00000546DD, UniRef:UniRef100_Q2G1J5, UniRef:UniRef50_A0A390B3T4, UniRef:UniRef90_P95707 contig_1 cds 188146 189408 + GCA000560365_00170 cap8O type 8 capsular polysaccharide synthesis protein Cap8O BlastRules:WP_000779494, COG:COG0677, COG:M, EC:1.1.1.336, KEGG:K02472, RefSeq:WP_000779497.1, SO:0001217, UniParc:UPI00000546DC, UniRef:UniRef100_Q2G1J4, UniRef:UniRef50_A0A239ZQS7, UniRef:UniRef90_A0A9N8IHJ7 contig_1 cds 189485 190630 + GCA000560365_00171 cap8P type 8 capsular polysaccharide synthesis protein Cap8P BlastRules:WP_000723452, COG:COG0381, COG:M, EC:5.1.3.14, GO:0008761, RefSeq:WP_000723454.1, SO:0001217, UniParc:UPI00000522AD, UniRef:UniRef100_A0A0H2WXI3, UniRef:UniRef50_A0A847MAJ7, UniRef:UniRef90_A0AAE8PBV8 contig_1 cds 190695 191021 - GCA000560365_00172 isdI staphylobilin-forming heme oxygenase IsdI BlastRules:WP_000480603, COG:COG2329, COG:H, EC:1.14.99.48, GO:0004392, GO:0005506, GO:0005737, GO:0020037, GO:0033212, GO:0042167, KEGG:K07145, RefSeq:WP_000480603.1, SO:0001217, UniParc:UPI00000D77A8, UniRef:UniRef100_Q2G1J2, UniRef:UniRef50_Q2FZE2, UniRef:UniRef90_Q2G1J2 contig_1 cds 191028 191411 - GCA000560365_00173 ybaN DUF454 domain-containing protein COG:COG2832, COG:S, RefSeq:WP_001237004.1, SO:0001217, UniParc:UPI00000546D9, UniRef:UniRef100_Q2G1J1, UniRef:UniRef50_Q2G1J1, UniRef:UniRef90_Q2G1J1 contig_1 cds 191838 193325 + GCA000560365_00174 aldA Putative aldehyde dehydrogenase AldA COG:COG1012, COG:I, EC:1.2.1.3, GO:0004029, RefSeq:WP_000290400.1, SO:0001217, UniParc:UPI00000546D8, UniRef:UniRef100_Q2G1J0, UniRef:UniRef50_Q2G1J0, UniRef:UniRef90_Q2G1J0 contig_1 cds 193971 194930 + GCA000560365_00175 czcD Cation transporter COG:COG1230, COG:P, RefSeq:WP_001013484.1, SO:0001217, UniParc:UPI00000546D7, UniRef:UniRef100_Q2G1I9, UniRef:UniRef50_Q2G1I9, UniRef:UniRef90_Q2G1I9 contig_1 cds 194992 195195 - GCA000560365_00176 hypothetical protein RefSeq:WP_000356963.1, SO:0001217, UniParc:UPI00000546D6, UniRef:UniRef100_Q2G1I8, UniRef:UniRef50_Q2G1I8, UniRef:UniRef90_Q2G1I8 contig_1 cds 195374 195886 + GCA000560365_00177 DUF4242 domain-containing protein RefSeq:WP_000171919.1, SO:0001217, UniParc:UPI00000546D4, UniRef:UniRef100_Q2G1I7, UniRef:UniRef50_A0A0A8JHF4, UniRef:UniRef90_Q2G1I7 contig_1 cds 196228 196968 + GCA000560365_00178 tauB ABC transporter ATP-binding protein COG:COG1116, COG:P, RefSeq:WP_000590850.1, SO:0001217, UniParc:UPI0000696B8B, UniRef:UniRef100_A0A5A8W1A5, UniRef:UniRef50_A0A0U1MVC7, UniRef:UniRef90_A0A0U1MVC7 contig_1 cds 196982 197956 + GCA000560365_00179 tauA ABC transporter substrate-binding protein COG:COG0715, COG:P, RefSeq:WP_000826685.1, SO:0001217, UniParc:UPI00003DAF88, UniRef:UniRef100_Q2G1I5, UniRef:UniRef50_A0A380C0S7, UniRef:UniRef90_Q2G1I5 contig_1 cds 197953 198714 + GCA000560365_00180 tauC ABC transmembrane type-1 domain-containing protein COG:COG0600, COG:P, RefSeq:WP_000197958.1, SO:0001217, UniParc:UPI00000546D1, UniRef:UniRef100_Q2G1I4, UniRef:UniRef50_Q2G1I4, UniRef:UniRef90_Q2G1I4 contig_1 cds 198724 199758 + GCA000560365_00181 caiA Acyl-CoA dehydrogenase COG:COG1960, COG:I, SO:0001217, UniParc:UPI0001AE9CEE, UniRef:UniRef100_A0A0D6GIG3, UniRef:UniRef50_A0A0E1XC01, UniRef:UniRef90_A0A0E1XC01 contig_1 cds 199975 200334 + GCA000560365_00182 mpsC Na+-translocating membrane putative-generating system MpsC domain-containing protein COG:C, COG:COG5609, RefSeq:WP_001092004.1, SO:0001217, UniParc:UPI00000D9BD5, UniRef:UniRef100_Q2G1I2, UniRef:UniRef50_Q2G1I2, UniRef:UniRef90_Q2G1I2 contig_1 cds 200507 201532 + GCA000560365_00183 ldhA NAD-dependent formate dehydrogenase COG:CHR, COG:COG1052, GO:0008863, GO:0051287, RefSeq:WP_000706137.1, SO:0001217, UniParc:UPI00004B5AA0, UniRef:UniRef100_Q2G1I1, UniRef:UniRef50_Q2G1I1, UniRef:UniRef90_Q2G1I1 contig_1 cds 201918 203168 + GCA000560365_00184 Major facilitator superfamily (MFS) profile domain-containing protein KEGG:K08152, RefSeq:WP_000826862.1, SO:0001217, UniParc:UPI00000546CD, UniRef:UniRef100_Q2G1I0, UniRef:UniRef50_Q2G1I0, UniRef:UniRef90_Q2G1I0 contig_1 cds 203615 210790 + GCA000560365_00185 ausA aureusimine non-ribosomal peptide synthetase AusA COG:COG3320, COG:Q, RefSeq:WP_000605282.1, SO:0001217, UniParc:UPI0000696B8C, UniRef:UniRef100_A0A380EB68, UniRef:UniRef50_A0A4U9TAP6, UniRef:UniRef90_A0AAE2ZS18 contig_1 cds 210803 211447 + GCA000560365_00186 ausB aureusimine biosynthesis 4'-phosphopantetheinyl transferase AusB COG:COG2091, COG:H, EC:2.7.8.-, GO:0016780, RefSeq:WP_000215724.1, SO:0001217, UniParc:UPI00000546CB, UniRef:UniRef100_Q2G1H8, UniRef:UniRef50_Q2G1H8, UniRef:UniRef90_Q2G1H8 contig_1 cds 211775 212269 - GCA000560365_00187 yagU DUF1440 domain-containing protein COG:COG3477, COG:S, KEGG:K08996, RefSeq:WP_000166932.1, SO:0001217, UniParc:UPI00000D9BD8, UniRef:UniRef100_Q2G1H7, UniRef:UniRef50_Q2G1H7, UniRef:UniRef90_Q2G1H7 contig_1 cds 212524 213288 - GCA000560365_00188 argB Acetylglutamate kinase COG:COG0548, COG:E, EC:2.7.2.8, GO:0003991, GO:0005524, GO:0005737, GO:0006526, GO:0042450, RefSeq:WP_000668894.1, SO:0001217, UniParc:UPI00000546C9, UniRef:UniRef100_Q2G1H6, UniRef:UniRef50_Q2G1H6, UniRef:UniRef90_Q2G1H6 contig_1 cds 213304 214545 - GCA000560365_00189 argJ bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ COG:COG1364, COG:E, EC:2.3.1.1, EC:2.3.1.35, GO:0004042, GO:0004358, GO:0005737, GO:0006526, GO:0006592, KEGG:K00620, RefSeq:WP_000682611.1, SO:0001217, UniParc:UPI00000546C8, UniRef:UniRef100_Q5HJJ0, UniRef:UniRef50_P63575, UniRef:UniRef90_P63575 contig_1 cds 214557 215591 - GCA000560365_00190 argC N-acetyl-gamma-glutamyl-phosphate reductase COG:COG0002, COG:E, EC:1.2.1.38, GO:0003942, GO:0005737, GO:0006526, GO:0006592, GO:0051287, GO:0070401, SO:0001217, UniParc:UPI00000546C7, UniRef:UniRef100_A0A0H3K5P8, UniRef:UniRef50_Q6GKC2, UniRef:UniRef90_Q6GKC2 contig_1 ncRNA 215149 215340 + GCA000560365_00191 sau-53 Staphylococcus sRNA sau-53 RFAM:RF02392, SO:0000655 contig_1 cds 215627 216811 - GCA000560365_00192 rocD ornithine--oxo-acid transaminase COG:COG4992, COG:E, EC:2.6.1.13, GO:0004587, GO:0005737, GO:0006526, GO:0030170, GO:0042802, GO:0055129, KEGG:K00819, RefSeq:WP_001084436.1, SO:0001217, UniParc:UPI0000125EA7, UniRef:UniRef100_Q5HJI8, UniRef:UniRef50_P60295, UniRef:UniRef90_P60295 contig_1 cds 217064 218419 - GCA000560365_00193 brnQ branched-chain amino acid transport system II carrier protein COG:COG1114, COG:E, GO:0015658, GO:0015803, GO:0016020, KEGG:K03311, RefSeq:WP_000728173.1, SO:0001217, UniParc:UPI00000546C5, UniRef:UniRef100_Q2G1H2, UniRef:UniRef50_A0A133CF62, UniRef:UniRef90_A0A380EB78 contig_1 cds 218695 219252 - GCA000560365_00194 pncA Isochorismatase-like domain-containing protein COG:COG1335, COG:HR, RefSeq:WP_000606890.1, SO:0001217, UniParc:UPI00003B1A3C, UniRef:UniRef100_A0A0D6GIX1, UniRef:UniRef50_Q2G1H1, UniRef:UniRef90_Q2G1H1 contig_1 cds 219319 220959 - GCA000560365_00195 pDC1 Alpha-keto acid decarboxylase family protein COG:COG3961, COG:GHR, EC:4.1.1.72, KEGG:K27601, RefSeq:WP_000813555.1, SO:0001217, UniParc:UPI00004B5AA2, UniRef:UniRef100_Q2G1H0, UniRef:UniRef50_A0A239YDI9, UniRef:UniRef90_A0A0Y9AAE9 contig_1 cds 221233 223278 - GCA000560365_00196 ptsG PTS system glucose-specific EIICBA component COG:COG2190, COG:G, EC:2.7.1.199, GO:0005886, GO:0008982, GO:0009401, GO:0016301, GO:0055056, GO:0090563, GO:1904659, RefSeq:WP_001227724.1, SO:0001217, UniParc:UPI00000D9BDC, UniRef:UniRef100_Q2G1G8, UniRef:UniRef50_P20166, UniRef:UniRef90_Q2G1G8 contig_1 cds 223864 224919 + GCA000560365_00197 mupG 6-phospho-N-acetylmuramidase COG:COG3589, COG:M, EC:3.2.1.-, GO:0005737, GO:0009254, GO:0016798, KEGG:K09963, RefSeq:WP_000145555.1, SO:0001217, UniParc:UPI00004B5AA4, UniRef:UniRef100_A0A0H2XHV5, UniRef:UniRef50_A0A0H2XHV5, UniRef:UniRef90_A0A0H2XHV5 contig_1 cds 224919 225815 + GCA000560365_00198 murQ N-acetylmuramic acid 6-phosphate etherase COG:COG2103, COG:M, EC:4.2.1.126, GO:0009254, GO:0016803, GO:0016835, GO:0046348, GO:0097173, GO:0097367, KEGG:K07106, RefSeq:WP_000432017.1, SO:0001217, UniParc:UPI0000696B8D, UniRef:UniRef100_Q2G1G6, UniRef:UniRef50_Q2G1G6, UniRef:UniRef90_Q2G1G6 contig_1 cds 225827 227281 + GCA000560365_00199 murP PTS system MurNAc-GlcNAc-specific EIIBC component COG:COG1264, COG:G, GO:0005886, GO:0008982, GO:0009254, GO:0009401, GO:0016301, GO:0090588, RefSeq:WP_000159750.1, SO:0001217, UniParc:UPI00000522AF, UniRef:UniRef100_Q2G1G5, UniRef:UniRef50_Q4L8H5, UniRef:UniRef90_Q2G1G5 contig_1 cds 227281 228159 + GCA000560365_00200 rpiR MurR/RpiR family transcriptional regulator COG:COG1737, COG:K, SO:0001217, UniParc:UPI00000546BD, UniRef:UniRef100_Q2G1G4, UniRef:UniRef50_Q2FVV2, UniRef:UniRef90_Q2G1G4 contig_1 cds 228353 228634 - GCA000560365_00201 hypothetical protein RefSeq:WP_001550030.1, SO:0001217, UniParc:UPI00000D777D, UniRef:UniRef100_Q2G1G3, UniRef:UniRef50_Q2G1G3, UniRef:UniRef90_Q2G1G3 contig_1 cds 228847 231636 + GCA000560365_00202 hsdR Type I restriction enzyme SauMW2ORF169P endonuclease subunit COG:COG0610, COG:V, EC:3.1.21.3, GO:0003677, GO:0005524, GO:0009035, GO:0009307, KEGG:K01153, RefSeq:WP_000331347.1, SO:0001217, UniParc:UPI00000546BC, UniRef:UniRef100_Q5HJH8, UniRef:UniRef50_Q4A127, UniRef:UniRef90_Q99X26 contig_1 cds 231841 232683 + GCA000560365_00203 Sce7726 family protein RefSeq:WP_000370334.1, SO:0001217, UniParc:UPI00000BC1B8, UniRef:UniRef100_Q2G1G1, UniRef:UniRef50_Q2G1G1, UniRef:UniRef90_Q2G1G1 contig_1 cds 232685 233608 + GCA000560365_00204 Sce7725 family protein RefSeq:WP_000291761.1, SO:0001217, UniParc:UPI00000546BA, UniRef:UniRef100_Q2G1G0, UniRef:UniRef50_Q2G1G0, UniRef:UniRef90_Q2G1G0 contig_1 cds 233595 234707 + GCA000560365_00205 RES domain-containing protein RefSeq:WP_000686457.1, SO:0001217, UniParc:UPI00004B5AA5, UniRef:UniRef100_A0A0E7YMP8, UniRef:UniRef50_Q2G1F9, UniRef:UniRef90_Q2G1F9 contig_1 cds 234972 236564 - GCA000560365_00206 cntF staphylopine uptake ABC transporter ATP-binding protein CntF COG:COG4172, COG:Q, RefSeq:WP_000067349.1, SO:0001217, UniParc:UPI00000546B8, UniRef:UniRef100_Q2G1F8, UniRef:UniRef50_A0A0Y9RYS1, UniRef:UniRef90_A0A0Y9RYS1 contig_1 cds 236566 237999 + GCA000560365_00207 dppB ABC transmembrane type-1 domain-containing protein COG:COG0601, COG:EP, SO:0001217, UniParc:UPI0002CAF6AE, UniRef:UniRef100_Q2G1F7, UniRef:UniRef50_Q2G1F7, UniRef:UniRef90_Q2G1F7 contig_1 cds 238005 239168 + GCA000560365_00208 dppC ABC transporter permease COG:COG1173, COG:EP, RefSeq:WP_000057899.1, SO:0001217, UniParc:UPI00000522E8, UniRef:UniRef100_Q2G1F6, UniRef:UniRef50_A0A0D0SFB5, UniRef:UniRef90_A0A390VWI1 contig_1 cds 239185 240960 + GCA000560365_00209 oppA Solute-binding protein family 5 domain-containing protein COG:COG4166, COG:E, RefSeq:WP_000720804.1, SO:0001217, UniParc:UPI00000D9BE7, UniRef:UniRef100_Q2G1F5, UniRef:UniRef50_Q2G1F5, UniRef:UniRef90_Q2G1F5 contig_1 cds 240998 243004 + GCA000560365_00210 ggt gamma-glutamyltransferase COG:COG0405, COG:E, EC:2.3.2.2, GO:0006750, GO:0006751, GO:0036374, RefSeq:WP_000236397.1, SO:0001217, UniParc:UPI0000696B90, UniRef:UniRef100_A0A0E8H648, UniRef:UniRef50_A0A151A3J0, UniRef:UniRef90_A0A0U1MVT3 contig_1 cds 243302 244075 - GCA000560365_00211 putative protein SAUSA300_0205 GO:0005886, RefSeq:WP_000643615.1, SO:0001217, UniParc:UPI00004B5AA7, UniRef:UniRef100_Q5HJG9, UniRef:UniRef50_Q2G1F3, UniRef:UniRef90_Q2G1F3 contig_1 cds 244265 244891 - GCA000560365_00212 azoR FMN-dependent NADH:quinone oxidoreductase COG:C, COG:COG1182, EC:1.6.5.-, GO:0009055, GO:0010181, GO:0016652, GO:0016655, KEGG:K01118, RefSeq:WP_001151451.1, SO:0001217, UniParc:UPI000012530F, UniRef:UniRef100_Q2G1F2, UniRef:UniRef50_O32224, UniRef:UniRef90_Q2YV20 contig_1 cds 245100 245678 + GCA000560365_00213 lysostaphin RefSeq:WP_000166917.1, SO:0001217, UniParc:UPI00004B5AA8, UniRef:UniRef100_Q2G1F1, UniRef:UniRef50_A0AAP8TTY0, UniRef:UniRef90_A0A181EW64 contig_1 cds 246061 247158 + GCA000560365_00214 malK Maltose/maltodextrin ABC superfamily ATP binding cassette transporter, ABC protein COG:COG3839, COG:G, RefSeq:WP_000818914.1, SO:0001217, UniParc:UPI00000546AE, UniRef:UniRef100_Q2G1F0, UniRef:UniRef50_A0A3A3AX25, UniRef:UniRef90_A0A3A3AX25 contig_1 cds 247171 248442 + GCA000560365_00215 malE Maltodextrin-binding protein COG:COG2182, COG:G, RefSeq:WP_000034961.1, SO:0001217, UniParc:UPI00000522B0, UniRef:UniRef100_Q2G1E9, UniRef:UniRef50_A0A380G462, UniRef:UniRef90_Q2G1E9 contig_1 cds 248445 249713 + GCA000560365_00216 ugpA Maltose/maltodextrin transport system permease protein COG:COG1175, COG:G, RefSeq:WP_000166888.1, SO:0001217, UniParc:UPI00000546AD, UniRef:UniRef100_Q2G1E8, UniRef:UniRef50_A0A0C2H8L9, UniRef:UniRef90_A0A0C2H8L9 contig_1 cds 249715 250554 + GCA000560365_00217 malG Maltose ABC transporter, permease protein COG:COG3833, COG:G, RefSeq:WP_000162661.1, SO:0001217, UniParc:UPI0000052279, UniRef:UniRef100_Q2G1E7, UniRef:UniRef50_H3NDB5, UniRef:UniRef90_Q2G1E7 contig_1 cds 250628 251704 + GCA000560365_00218 mviM NADH-dependent dehydrogenase COG:COG0673, COG:R, RefSeq:WP_000153466.1, SO:0001217, UniParc:UPI00004B5AA9, UniRef:UniRef100_Q2G1E6, UniRef:UniRef50_A0A660A233, UniRef:UniRef90_A0A660A233 contig_1 cds 251729 252769 + GCA000560365_00219 mviM Gfo/Idh/MocA family oxidoreductase COG:COG0673, COG:R, RefSeq:WP_000163809.1, SO:0001217, UniParc:UPI00000546AA, UniRef:UniRef100_Q2G1E5, UniRef:UniRef50_A0A2Y2IEY6, UniRef:UniRef90_A0A2Y2IEY6 contig_1 cds 252824 253792 + GCA000560365_00220 ycjR Xylose isomerase-like TIM barrel domain-containing protein COG:COG1082, COG:G, RefSeq:WP_000690419.1, SO:0001217, UniParc:UPI00000D9BEC, UniRef:UniRef100_Q2G1E4, UniRef:UniRef50_K8EEE9, UniRef:UniRef90_Q2G1E4 contig_1 cds 254154 254648 - GCA000560365_00221 ypbQ Isoprenylcysteine carboxyl methyltransferase family protein COG:COG1755, COG:S, RefSeq:WP_000603755.1, SO:0001217, UniParc:UPI00000D7830, UniRef:UniRef100_Q2G1E3, UniRef:UniRef50_Q2G1E3, UniRef:UniRef90_Q2G1E3 contig_1 cds 254881 256260 + GCA000560365_00222 uhpT hexose phosphate transporter UhpT COG:COG2271, COG:G, GO:0022857, GO:0055085, KEGG:K07784, RefSeq:WP_001008722.1, SO:0001217, UniParc:UPI00000D772F, UniRef:UniRef100_Q2G1E2, UniRef:UniRef50_A0A9D7FSA6, UniRef:UniRef90_Q2G1E2 contig_1 cds 256619 257377 - GCA000560365_00223 hptR Transcriptional regulatory protein HptR COG:COG4753, COG:TK, GO:0000160, GO:0003700, GO:0005737, GO:0043565, KEGG:K07720, RefSeq:WP_000477521.1, SO:0001217, UniParc:UPI00000546A7, UniRef:UniRef100_Q2G1E1, UniRef:UniRef50_Q2G1E1, UniRef:UniRef90_Q2G1E1 contig_1 cds 257370 258926 - GCA000560365_00224 hptS Sensor protein kinase HptS COG:COG2972, COG:T, EC:2.7.13.3, GO:0000155, GO:0005524, GO:0005886, KEGG:K25212, RefSeq:WP_000127982.1, SO:0001217, UniParc:UPI00000546A6, UniRef:UniRef100_Q2G1E0, UniRef:UniRef50_Q2G1E0, UniRef:UniRef90_Q2G1E0 contig_1 cds 258923 259891 - GCA000560365_00225 afuA Lipoprotein, putative COG:COG1840, COG:GH, KEGG:K25211, RefSeq:WP_000837105.1, SO:0001217, UniParc:UPI00000546A5, UniRef:UniRef100_Q2G1D9, UniRef:UniRef50_S2XG35, UniRef:UniRef90_Q2G1D9 contig_1 cds 260479 262728 + GCA000560365_00226 pflB formate C-acetyltransferase COG:C, COG:COG1882, EC:2.3.1.54, GO:0005737, GO:0005829, GO:0005975, GO:0006006, GO:0008861, KEGG:K00656, RefSeq:WP_000894660.1, SO:0001217, UniParc:UPI00000D789B, UniRef:UniRef100_Q2G1D8, UniRef:UniRef50_Q2G1D8, UniRef:UniRef90_Q2G1D8 contig_1 cds 262751 263506 + GCA000560365_00227 pflA pyruvate formate-lyase-activating protein COG:COG1180, COG:O, EC:1.97.1.4, GO:0005737, GO:0006006, GO:0043365, GO:0046872, GO:0051539, RefSeq:WP_000911657.1, SO:0001217, UniParc:UPI00000546A2, UniRef:UniRef100_Q2G1D7, UniRef:UniRef50_P0A442, UniRef:UniRef90_Q2G1D7 contig_1 cds 263842 265605 + GCA000560365_00228 ugpQ1 GP-PDE domain-containing protein COG:COG4781, COG:I, EC:3.1.4.46, KEGG:K01126, RefSeq:WP_000822608.1, SO:0001217, UniParc:UPI00004B5AAC, UniRef:UniRef100_Q2G1D5, UniRef:UniRef50_Q2G1D5, UniRef:UniRef90_Q2G1D5 contig_1 cds 265769 266113 - GCA000560365_00229 Staphylococcal complement inhibitor KEGG:K14199, RefSeq:WP_000211597.1, SO:0001217, UniParc:UPI00000546A0, UniRef:UniRef100_Q2G1D4, UniRef:UniRef50_Q4W8K4, UniRef:UniRef90_Q4W8K4 contig_1 cds 266303 268132 + GCA000560365_00230 coa staphylocoagulase RefSeq:WP_000744073.1, SO:0001217, UniParc:UPI0000696B91, UniRef:UniRef100_C4B834, UniRef:UniRef50_P17855, UniRef:UniRef90_C4B834 contig_1 cds 268735 269919 - GCA000560365_00231 paaJ putative acetyl-CoA acyltransferase COG:COG0183, COG:I, RefSeq:WP_001154618.1, SO:0001217, UniParc:UPI00004B5AAE, UniRef:UniRef100_Q93SM1, UniRef:UniRef50_O32177, UniRef:UniRef90_Q2G1D0 contig_1 cds 269949 272210 - GCA000560365_00232 fadB enoyl-CoA hydratase COG:COG1250, COG:I, RefSeq:WP_000154514.1, SO:0001217, UniParc:UPI000005469D, UniRef:UniRef100_Q2G1C9, UniRef:UniRef50_Q2G1C9, UniRef:UniRef90_Q2G1C9 contig_1 cds 272396 273607 - GCA000560365_00233 caiA Glutaryl-CoA dehydrogenase COG:COG1960, COG:I, RefSeq:WP_000142189.1, SO:0001217, UniParc:UPI00003B136C, UniRef:UniRef100_Q2G1C8, UniRef:UniRef50_A0A2S6D7L1, UniRef:UniRef90_A0A2S6D7L1 contig_1 cds 273719 275224 - GCA000560365_00234 menE Putative long chain fatty acid-CoA ligase VraA COG:COG0318, COG:I, RefSeq:WP_001008401.1, SO:0001217, UniParc:UPI00000AF2FC, UniRef:UniRef100_Q2G1C7, UniRef:UniRef50_A0AAP7IER6, UniRef:UniRef90_A0A390WIJ0 contig_1 cds 275250 276812 - GCA000560365_00235 ydiF Acetyl-CoA/acetoacetyl-CoA transferase COG:COG4670, COG:I, SO:0001217, UniParc:UPI0001698E14, UniRef:UniRef100_A0A1S5YIC4, UniRef:UniRef50_A0A9N8IHE7, UniRef:UniRef90_A0A9N8IHE7 contig_1 cds 277181 278410 + GCA000560365_00236 prsW Protease PrsW COG:COG2339, COG:T, SO:0001217, UniParc:UPI00015FD742, UniRef:UniRef100_Q2G1C5, UniRef:UniRef50_S2YE33, UniRef:UniRef90_A0A5S9C588 contig_1 cds 278724 280199 - GCA000560365_00237 nikA nickel ABC transporter substrate-binding protein COG:COG0747, COG:E, GO:0015675, GO:0015833, GO:0042597, GO:0043190, GO:0140359, GO:1904680, RefSeq:WP_000669653.1, SO:0001217, UniParc:UPI0000054698, UniRef:UniRef100_Q2G2P5, UniRef:UniRef50_Q2G2P5, UniRef:UniRef90_Q2G2P5 contig_1 cds 280397 280753 - GCA000560365_00238 yeaO DUF488 domain-containing protein COG:COG3189, COG:S, RefSeq:WP_000215216.1, SO:0001217, UniParc:UPI00000D7851, UniRef:UniRef100_Q2G2P4, UniRef:UniRef50_Q4A0G8, UniRef:UniRef90_Q2G2P4 contig_1 cds 280910 281083 - GCA000560365_00239 hypothetical protein RefSeq:WP_000773989.1, SO:0001217, UniParc:UPI0000054696, UniRef:UniRef100_Q2G2P3, UniRef:UniRef50_Q2G2P3, UniRef:UniRef90_Q2G2P3 contig_1 cds 281109 282254 - GCA000560365_00240 fpr nitric oxide dioxygenase COG:C, COG:COG1018, EC:1.14.12.17, KEGG:K05916, RefSeq:WP_000954810.1, SO:0001217, UniParc:UPI0000054695, UniRef:UniRef100_Q2G2P2, UniRef:UniRef50_Q2G2P2, UniRef:UniRef90_Q2G2P2 contig_1 cds 282827 283780 + GCA000560365_00241 ldh1 L-lactate dehydrogenase COG:C, COG:COG0039, EC:1.1.1.27, GO:0004459, GO:0005737, GO:0006089, GO:0006096, RefSeq:WP_001031882.1, SO:0001217, UniParc:UPI0000054693, UniRef:UniRef100_Q2G218, UniRef:UniRef50_Q2G218, UniRef:UniRef90_Q2G218 contig_1 cds 284100 285629 - GCA000560365_00242 ptsG2 PTS glucose transporter subunit IIB COG:COG1264, COG:G, RefSeq:WP_000838204.1, SO:0001217, UniParc:UPI00000D9BFA, UniRef:UniRef100_Q2G219, UniRef:UniRef50_A0A0G9G6Y5, UniRef:UniRef90_A0A2S6D7K1 contig_1 cds 285991 286926 + GCA000560365_00243 uRH1 Nucleoside hydrolase COG:COG1957, COG:F, RefSeq:WP_000823215.1, SO:0001217, UniParc:UPI0000054690, UniRef:UniRef100_Q2G217, UniRef:UniRef50_A0A389XQD2, UniRef:UniRef90_A0A389XQD2 contig_1 cds 287265 289361 + GCA000560365_00244 bglG PTS system mannitol (Cryptic)-specific transporter subunit IIA COG:COG3711, COG:K, RefSeq:WP_001012747.1, SO:0001217, UniParc:UPI000005468D, UniRef:UniRef100_Q2G2B8, UniRef:UniRef50_A0A0Z0QCU8, UniRef:UniRef90_A0A0Z0QCU8 contig_1 cds 289346 289813 + GCA000560365_00245 ptsN PTS sugar transporter subunit IIA COG:COG1762, COG:GT, RefSeq:WP_000531476.1, SO:0001217, UniParc:UPI000005468C, UniRef:UniRef100_Q2G2B7, UniRef:UniRef50_A0A380G592, UniRef:UniRef90_A0A2S6DBD2 contig_1 cds 289836 290114 + GCA000560365_00246 sgaB PTS system galactitol-specific transporter subunit IIB COG:COG3414, COG:G, RefSeq:WP_000815795.1, SO:0001217, UniParc:UPI00000D765E, UniRef:UniRef100_Q2G2B6, UniRef:UniRef50_Q9KGB5, UniRef:UniRef90_A0A239YB06 contig_1 cds 290341 291600 + GCA000560365_00247 sgcC PTS galactitol transporter subunit IIC COG:COG3775, COG:G, KEGG:K02775, RefSeq:WP_000120104.1, SO:0001217, UniParc:UPI000005468A, UniRef:UniRef100_Q2G2C8, UniRef:UniRef50_A0A2Y1NYM9, UniRef:UniRef90_A0A2Y1NYM9 contig_1 cds 291618 292673 + GCA000560365_00248 tdh Sorbitol dehydrogenase COG:COG1063, COG:ER, RefSeq:WP_000646207.1, SO:0001217, UniParc:UPI0001B8384B, UniRef:UniRef100_A0A2C9TWF1, UniRef:UniRef50_Q9Z9U1, UniRef:UniRef90_A0A2I7Y3H3 contig_1 cds 292675 292821 + GCA000560365_00249 hypothetical protein RefSeq:WP_000230358.1, SO:0001217, UniParc:UPI0000054688, UniRef:UniRef100_Q2G2C6, UniRef:UniRef50_Q2G2C6, UniRef:UniRef90_Q2G2C6 contig_1 cds 292845 293888 + GCA000560365_00250 tdh Enoyl reductase (ER) domain-containing protein COG:COG1063, COG:ER, RefSeq:WP_000645604.1, SO:0001217, UniParc:UPI00004B5AB4, UniRef:UniRef100_Q2G2C5, UniRef:UniRef50_A0A9X8RLC9, UniRef:UniRef90_Q2G2C5 contig_1 cds 294416 295132 + GCA000560365_00251 tarI2 Ribitol-5-phosphate cytidylyltransferase 2 COG:COG1211, COG:I, EC:2.7.7.40, GO:0008299, GO:0047349, GO:0050518, GO:0071555, GO:1902012, RefSeq:WP_000638475.1, SO:0001217, UniParc:UPI00000CAC55, UniRef:UniRef100_Q2G2C4, UniRef:UniRef50_Q2G2C4, UniRef:UniRef90_Q2G2C4 contig_1 cds 295125 296150 + GCA000560365_00252 tarJ' Ribulose-5-phosphate reductase 2 COG:COG1063, COG:ER, EC:1.1.1.405, GO:0008270, GO:0050256, GO:0071555, GO:1902012, KEGG:K05352, RefSeq:WP_000610189.1, SO:0001217, UniParc:UPI00004B5AB5, UniRef:UniRef100_Q2G1C4, UniRef:UniRef50_Q2G1B9, UniRef:UniRef90_Q2G1C4 contig_1 cds 296172 297866 + GCA000560365_00253 tarL teichoic acid ribitol-phosphate polymerase TarL COG:COG1887, COG:MI, EC:2.7.8.14, GO:0005886, GO:0019350, GO:0047355, GO:0047356, GO:0071555, RefSeq:WP_000167985.1, SO:0001217, UniParc:UPI0000054684, UniRef:UniRef100_Q2G1C2, UniRef:UniRef50_Q2G1B8, UniRef:UniRef90_Q2G1C2 contig_1 cds 298294 299463 + GCA000560365_00254 tarF teichoic acid glycerol-phosphate transferase TarF COG:COG1887, COG:MI, EC:2.7.8.45, GO:0005886, GO:0019350, GO:0047355, GO:0071555, RefSeq:WP_000594815.1, SO:0001217, UniParc:UPI00003D0D84, UniRef:UniRef100_Q2G1C1, UniRef:UniRef50_Q2G1C1, UniRef:UniRef90_Q2G1C1 contig_1 cds 299739 300455 + GCA000560365_00255 tarI1 Ribitol-5-phosphate cytidylyltransferase 1 COG:COG1211, COG:I, EC:2.7.7.40, GO:0008299, GO:0047349, GO:0050518, GO:0071555, GO:1902012, RefSeq:WP_000872486.1, SO:0001217, UniParc:UPI0000054682, UniRef:UniRef100_Q2G1C0, UniRef:UniRef50_Q2G2C4, UniRef:UniRef90_Q2G1C0 contig_1 cds 300448 301473 + GCA000560365_00256 tarJ Ribulose-5-phosphate reductase 1 COG:COG1063, COG:ER, EC:1.1.1.405, GO:0008270, GO:0050256, GO:0071555, GO:1902012, KEGG:K05352, RefSeq:WP_000610203.1, SO:0001217, UniParc:UPI00000D9C01, UniRef:UniRef100_Q2G1B9, UniRef:UniRef50_Q2G1B9, UniRef:UniRef90_Q2G1B9 contig_1 cds 301495 303183 + GCA000560365_00257 tarL teichoic acid ribitol-phosphate polymerase TarL COG:COG1887, COG:MI, EC:2.7.8.14, GO:0005886, GO:0019350, GO:0047355, GO:0047356, GO:0071555, RefSeq:WP_000240920.1, SO:0001217, UniParc:UPI00000D789A, UniRef:UniRef100_Q2G1B8, UniRef:UniRef50_Q2G1B8, UniRef:UniRef90_Q2G1B8 contig_1 cds 303216 304940 + GCA000560365_00258 tarS poly(ribitol-phosphate) beta-N-acetylglucosaminyltransferase BlastRules:WP_000975351, COG:COG0463, COG:M, EC:2.4.1.355, GO:0016757, GO:0019350, GO:0046677, GO:0046872, GO:0071555, RefSeq:WP_000975357.1, SO:0001217, UniParc:UPI000005467F, UniRef:UniRef100_Q2G1B7, UniRef:UniRef50_A0A0H3JPC6, UniRef:UniRef90_A0A0H3JPC6 contig_1 cds 305080 305754 + GCA000560365_00259 scdA iron-sulfur cluster repair di-iron protein ScdA COG:COG2846, COG:O, GO:0005737, GO:0006979, GO:0030091, GO:0046872, GO:0051409, RefSeq:WP_000608826.1, SO:0001217, UniParc:UPI00004B5AB7, UniRef:UniRef100_P72360, UniRef:UniRef50_P72360, UniRef:UniRef90_P72360 contig_1 cds 306001 307755 + GCA000560365_00260 lytS Sensor histidine kinase/phosphatase LytS COG:COG3275, COG:T, EC:2.7.13.3, EC:3.1.3.-, GO:0000155, GO:0005524, GO:0005886, GO:0016787, GO:0071555, KEGG:K07704, RefSeq:WP_000950281.1, SO:0001217, UniParc:UPI00000D775C, UniRef:UniRef100_Q53705, UniRef:UniRef50_Q53705, UniRef:UniRef90_Q53705 contig_1 cds 307758 308498 + GCA000560365_00261 lytR response regulator transcription factor LytR COG:COG3279, COG:KT, GO:0000156, GO:0003677, GO:0005737, RefSeq:WP_000645452.1, SO:0001217, UniParc:UPI000005467B, UniRef:UniRef100_P60611, UniRef:UniRef50_P60611, UniRef:UniRef90_P60611 contig_1 cds 308617 309054 + GCA000560365_00262 lrgA antiholin-like murein hydrolase modulator LrgA BlastRules:WP_001792906, COG:COG1380, COG:R, GO:0005886, GO:0012501, GO:0019835, GO:0031640, KEGG:K05338, SO:0001217, UniParc:UPI00000CABD5, UniRef:UniRef100_P60649, UniRef:UniRef50_P72358, UniRef:UniRef90_P72358 contig_1 cds 309047 309748 + GCA000560365_00263 lrgB antiholin-like protein LrgB COG:COG1346, COG:M, GO:0005886, GO:0012501, GO:0019835, GO:0031640, KEGG:K05339, RefSeq:WP_000607067.1, SO:0001217, UniParc:UPI0000054679, UniRef:UniRef100_P60643, UniRef:UniRef50_P60643, UniRef:UniRef90_P60643 contig_1 cds 309856 310560 - GCA000560365_00264 mngR HTH gntR-type domain-containing protein COG:COG2188, COG:K, KEGG:K03489, RefSeq:WP_000922329.1, SO:0001217, UniParc:UPI00004B5AB8, UniRef:UniRef100_Q2G1B1, UniRef:UniRef50_Q2G1B1, UniRef:UniRef90_Q2G1B1 contig_1 cds 310709 311500 + GCA000560365_00265 nagE PTS system glucose-specific EIIA component COG:COG2190, COG:G, RefSeq:WP_000066937.1, SO:0001217, UniParc:UPI0000696B97, UniRef:UniRef100_A0A1S6AFM4, UniRef:UniRef50_A0A389V698, UniRef:UniRef90_A0A389V698 contig_1 cds 311516 312952 + GCA000560365_00266 bglB 6-phospho-beta-glucosidase, putative COG:COG2723, COG:G, RefSeq:WP_000163988.1, SO:0001217, UniParc:UPI0000054676, UniRef:UniRef100_Q2G1A9, UniRef:UniRef50_Q46829, UniRef:UniRef90_Q2G1A9 contig_1 ncRNA 312945 313189 - GCA000560365_00267 S35 Staphylococcus sRNA 35 (srn_0335) RFAM:RF02894, SO:0000655 contig_1 cds 313386 314147 - GCA000560365_00268 ubiE SAM-dependent methyltransferase COG:COG2226, COG:HJ, RefSeq:WP_000031268.1, SO:0001217, UniParc:UPI0000054675, UniRef:UniRef100_Q2G1A8, UniRef:UniRef50_A0A131JTX0, UniRef:UniRef90_A0A131JTX0 contig_1 cds 314398 315312 - GCA000560365_00269 rbsK ribokinase COG:COG0524, COG:G, EC:2.7.1.15, GO:0004747, GO:0005524, GO:0005829, GO:0006014, GO:0019303, GO:0046872, KEGG:K00852, RefSeq:WP_000182751.1, SO:0001217, UniParc:UPI0000054674, UniRef:UniRef100_A0A0H2WZY4, UniRef:UniRef50_A0A0H2WZY4, UniRef:UniRef90_A0A0H2WZY4 contig_1 cds 315340 315744 - GCA000560365_00270 rbsD D-ribose pyranase COG:COG1869, COG:G, EC:5.4.99.62, GO:0005829, GO:0016872, GO:0019303, GO:0048029, GO:0062193, KEGG:K06726, RefSeq:WP_000747850.1, SO:0001217, UniParc:UPI0000696B98, UniRef:UniRef100_Q2FK01, UniRef:UniRef50_Q2G1A5, UniRef:UniRef90_Q2G1A5 contig_1 cds 315759 316640 - GCA000560365_00271 rbsU ribose transporter RbsU BlastRules:WP_000029204, COG:COG4975, COG:G, GO:0005886, GO:0015144, GO:0015591, GO:0015752, KEGG:K06216, RefSeq:WP_031808132.1, SO:0001217, UniParc:UPI00044C17EB, UniRef:UniRef100_UPI00044C17EB, UniRef:UniRef50_Q8CN16, UniRef:UniRef90_P60946 contig_1 cds 316872 317870 - GCA000560365_00272 rbsR ribose utilization transcriptional repressor RbsR COG:COG1609, COG:K, RefSeq:WP_000757880.1, SO:0001217, UniParc:UPI0000054670, UniRef:UniRef100_Q2G1A3, UniRef:UniRef50_Q2G1A3, UniRef:UniRef90_Q2G1A3 contig_1 cds 318250 318642 + GCA000560365_00273 Phage protein RefSeq:WP_001159765.1, SO:0001217, UniParc:UPI000005466E, UniRef:UniRef100_Q2G1A1, UniRef:UniRef50_Q5HRD5, UniRef:UniRef90_A0A7U7JSC9 contig_1 ncRNA 318731 318952 - GCA000560365_00274 tsr24 S. aureus tsr24 small RNA RFAM:RF02577, SO:0000655 contig_1 cds 318870 319274 + GCA000560365_00275 Truncated transposase SO:0001217, UniParc:UPI00004B5ABA, UniRef:UniRef100_Q2G1A0, UniRef:UniRef50_Q2G1A0, UniRef:UniRef90_Q2G1A0 contig_1 cds 319315 320691 - GCA000560365_00276 uhpC Quinolone resistance protein NorB COG:COG2271, COG:G, RefSeq:WP_001066545.1, SO:0001217, UniParc:UPI00004B5ABB, UniRef:UniRef100_A0A266CW33, UniRef:UniRef50_A0A115E5S9, UniRef:UniRef90_A0A115E5S9 contig_1 cds 320925 321917 + GCA000560365_00277 yxeI Choloylglycine hydrolase/NAAA C-terminal domain-containing protein COG:COG3049, COG:MR, RefSeq:WP_000337364.1, SO:0001217, UniParc:UPI0000696B9A, UniRef:UniRef100_A0A266CX41, UniRef:UniRef50_Q2G198, UniRef:UniRef90_Q2G198 contig_1 cds 322243 323193 + GCA000560365_00278 lytM glycine-glycine endopeptidase LytM BlastRules:WP_000736798, COG:COG0739, COG:M, EC:3.4.24.75, GO:0004222, GO:0005576, GO:0006508, GO:0046872, GO:0071555, KEGG:K08259, RefSeq:WP_000736798.1, SO:0001217, UniParc:UPI000052A499, UniRef:UniRef100_O33599, UniRef:UniRef50_O33599, UniRef:UniRef90_O33599 contig_1 cds 323245 323904 - GCA000560365_00279 rbbA ABC transporter domain-containing protein COG:COG1131, COG:JV, RefSeq:WP_000570071.1, SO:0001217, UniParc:UPI0000054669, UniRef:UniRef100_Q2G196, UniRef:UniRef50_Q2G196, UniRef:UniRef90_Q2G196 contig_1 cds 323918 324838 - GCA000560365_00280 ABC-2 type transporter transmembrane domain-containing protein RefSeq:WP_000806113.1, SO:0001217, UniParc:UPI00004B5ABD, UniRef:UniRef100_Q2G195, UniRef:UniRef50_Q2G195, UniRef:UniRef90_Q2G195 contig_1 cds 324835 326001 - GCA000560365_00281 ABC-2 type transporter transmembrane domain-containing protein RefSeq:WP_000848764.1, SO:0001217, UniParc:UPI00000522E9, UniRef:UniRef100_Q2G194, UniRef:UniRef50_Q2G194, UniRef:UniRef90_Q2G194 contig_1 cds 326069 327592 - GCA000560365_00282 hypothetical protein RefSeq:WP_000038517.1, SO:0001217, UniParc:UPI0000696B9B, UniRef:UniRef100_Q2G193, UniRef:UniRef50_Q2G193, UniRef:UniRef90_Q2G193 contig_1 cds 327863 328516 + GCA000560365_00283 DUF5079 domain-containing protein RefSeq:WP_000421225.1, SO:0001217, UniParc:UPI0000054665, UniRef:UniRef100_Q2G192, UniRef:UniRef50_Q2G192, UniRef:UniRef90_Q2G192 contig_1 cds 328550 329137 + GCA000560365_00284 DUF5080 domain-containing protein RefSeq:WP_000583198.1, SO:0001217, UniParc:UPI0000054664, UniRef:UniRef100_Q2G191, UniRef:UniRef50_Q2G191, UniRef:UniRef90_Q2G191 contig_1 cds 329280 330182 - GCA000560365_00285 Secretory antigen COG:COG3942, COG:M, SO:0001217, UniParc:UPI0000052276, UniRef:UniRef100_Q2G190, UniRef:UniRef50_A0A658WJQ6, UniRef:UniRef90_A0A658WJQ6 contig_1 cds 330421 330714 + GCA000560365_00286 esxA WXG100 family type VII secretion effector EsxA BlastRules:WP_001240826, COG:COG4842, COG:V, GO:0005576, RefSeq:WP_001240826.1, SO:0001217, UniParc:UPI00000D7884, UniRef:UniRef100_Q2G189, UniRef:UniRef50_Q2G189, UniRef:UniRef90_Q2G189 contig_1 cds 330798 333827 + GCA000560365_00287 esaA type VII secretion system protein EsaA COG:COG1511, COG:S, GO:0005886, KEGG:K01421, RefSeq:WP_000728949.1, SO:0001217, UniParc:UPI0000054662, UniRef:UniRef100_Q2G188, UniRef:UniRef50_Q2G188, UniRef:UniRef90_Q2G188, VFDB:VFC0086, VFDB:VFG002406 contig_1 cds 333827 334285 + GCA000560365_00288 essA type VII secretion system protein EssA, monotopic membrane protein GO:0005886, GO:0009306, RefSeq:WP_000928935.1, SO:0001217, UniParc:UPI0000054661, UniRef:UniRef100_Q5HJ89, UniRef:UniRef50_P0C052, UniRef:UniRef90_P0C052, VFDB:VFC0086, VFDB:VFG002404 contig_1 cds 334257 334499 + GCA000560365_00289 esaB type VII secretion protein EsaB BlastRules:WP_001071606, COG:COG5417, COG:U, GO:0005737, RefSeq:WP_001071606.1, SO:0001217, UniParc:UPI0000054660, UniRef:UniRef100_Q5HJ88, UniRef:UniRef50_Q5HJ88, UniRef:UniRef90_Q5HJ88 contig_1 cds 334512 335846 + GCA000560365_00290 essB type VII secretion protein EssB COG:COG4499, COG:U, GO:0005886, GO:0009306, RefSeq:WP_000240338.1, SO:0001217, UniParc:UPI000005465F, UniRef:UniRef100_Q2G185, UniRef:UniRef50_Q2G185, UniRef:UniRef90_Q2G185 contig_1 cds 335868 340307 + GCA000560365_00291 essC type VII secretion system protein EssC, FtsK/SpoIIIE family ATPase COG:COG1674, COG:D, GO:0003677, GO:0005524, GO:0005886, GO:0009306, RefSeq:WP_000549278.1, SO:0001217, UniParc:UPI000005465D, UniRef:UniRef100_Q2G184, UniRef:UniRef50_Q2G184, UniRef:UniRef90_Q2G184, VFDB:VFC0086, VFDB:VFG002409 contig_1 cds 340337 340729 + GCA000560365_00292 esxC type VII secretion system secreted protein EsxC GO:0005576, RefSeq:WP_001010289.1, SO:0001217, UniParc:UPI000005465C, UniRef:UniRef100_A0A0H2XIK2, UniRef:UniRef50_Q99WT8, UniRef:UniRef90_Q99WT8, VFDB:VFC0086, VFDB:VFG002410 contig_1 cds 340745 341059 + GCA000560365_00293 esxB WXG100 family type VII secretion effector EsxB BlastRules:WP_000509668, GO:0005576, RefSeq:WP_000509668.1, SO:0001217, UniParc:UPI000005465B, UniRef:UniRef100_Q2G182, UniRef:UniRef50_Q2G182, UniRef:UniRef90_Q2G182 contig_1 cds 341056 341733 + GCA000560365_00294 essE type VII secretion system chaperone protein GO:0005576, SO:0001217, UniParc:UPI000005465A, UniRef:UniRef100_Q2G181, UniRef:UniRef50_Q2G181, UniRef:UniRef90_Q2G181, VFDB:VFC0086, VFDB:VFG049701 contig_1 cds 341739 342050 + GCA000560365_00295 esxD type VII secretion system secreted protein EsxD GO:0005576, SO:0001217, UniParc:UPI0001F24552, UniRef:UniRef100_A0A1Q4GZ01, UniRef:UniRef50_A0A0H2XDF9, UniRef:UniRef90_A0A0H2XDF9, VFDB:VFC0086, VFDB:VFG049714 contig_1 cds 342051 343904 + GCA000560365_00296 esaD type VII secretion system secreted protein, a nuclease toxin EsaD COG:COG5444, COG:V, GO:0005576, GO:0005886, SO:0001217, UniParc:UPI000157442A, UniRef:UniRef100_Q2G179, UniRef:UniRef50_Q2G179, UniRef:UniRef90_Q2G179, VFDB:VFC0086, VFDB:VFG049727 contig_1 cds 343915 344406 + GCA000560365_00297 esaG Type VII secretion system protein EsaG GO:0005737, RefSeq:WP_000142049.1, SO:0001217, UniParc:UPI00000547D8, UniRef:UniRef100_Q2G178, UniRef:UniRef50_Q2G178, UniRef:UniRef90_Q2G178 contig_1 cds 344614 345297 + GCA000560365_00298 DUF5079 domain-containing protein RefSeq:WP_000208414.1, SO:0001217, UniParc:UPI00004B5AC2, UniRef:UniRef100_A0A0D6GEJ4, UniRef:UniRef50_Q2G177, UniRef:UniRef90_Q2G177 contig_1 cds 345444 346055 + GCA000560365_00299 DUF5080 domain-containing protein RefSeq:WP_000394915.1, SO:0001217, UniParc:UPI00004B5AC3, UniRef:UniRef100_Q2G176, UniRef:UniRef50_Q2G176, UniRef:UniRef90_Q2G176 contig_1 cds 346191 346409 + GCA000560365_00300 Mid2-like cell wall stress sensor domain protein RefSeq:WP_000431307.1, SO:0001217, UniParc:UPI000005490C, UniRef:UniRef100_Q2G175, UniRef:UniRef50_A0A1D4LJZ2, UniRef:UniRef90_A0A2K4AI94 contig_1 cds 346541 347041 + GCA000560365_00301 TIGR01741 family protein RefSeq:WP_000142036.1, SO:0001217, UniParc:UPI00004B5AC4, UniRef:UniRef100_A0A266CYE9, UniRef:UniRef50_Q2G178, UniRef:UniRef90_A0A266CYE9 contig_1 cds 347052 347552 + GCA000560365_00302 TIGR01741 family protein RefSeq:WP_001008475.1, SO:0001217, UniParc:UPI000157442B, UniRef:UniRef100_A0A2C9TVT7, UniRef:UniRef50_Q2G2Q5, UniRef:UniRef90_A0A0H2X107 contig_1 cds 347563 347715 + GCA000560365_00303 TIGR01741 family protein RefSeq:WP_000575670.1, SO:0001217, UniParc:UPI00000545B4, UniRef:UniRef100_UPI00000545B4, UniRef:UniRef50_A0A7I8NL17, UniRef:UniRef90_UPI0011D25C7E contig_1 cds 347759 348058 + GCA000560365_00304 TIGR01741 family protein SO:0001217, UniRef:UniRef50_A0A380DK83, UniRef:UniRef90_UPI000A2491A1 contig_1 cds 348069 348560 + GCA000560365_00305 TIGR01741 family protein RefSeq:WP_000142033.1, SO:0001217, UniParc:UPI0000696B9D, UniRef:UniRef100_A0A266CXZ5, UniRef:UniRef50_Q2G2Q9, UniRef:UniRef90_A0A0H2X0D4 contig_1 cds 348770 349453 + GCA000560365_00306 DUF5079 domain-containing protein RefSeq:WP_000208389.1, SO:0001217, UniParc:UPI00000545B1, UniRef:UniRef100_A0A2C9TLI8, UniRef:UniRef50_Q2G177, UniRef:UniRef90_Q2G177 contig_1 cds 350039 350539 + GCA000560365_00307 TIGR01741 family protein RefSeq:WP_000141982.1, SO:0001217, UniParc:UPI00000545B0, UniRef:UniRef100_A0A2C9TLT0, UniRef:UniRef50_Q2G178, UniRef:UniRef90_A0A2C9TLT0 contig_1 cds 350551 351051 + GCA000560365_00308 Cytosolic protein RefSeq:WP_000142145.1, SO:0001217, UniParc:UPI00004B5AC7, UniRef:UniRef100_A0A2C9TRD9, UniRef:UniRef50_Q2G2Q5, UniRef:UniRef90_A0A2C9TRD9 contig_1 cds 351062 351562 + GCA000560365_00309 TIGR01741 family protein RefSeq:WP_000142176.1, SO:0001217, UniParc:UPI00004B5AC8, UniRef:UniRef100_A0A2C9TR44, UniRef:UniRef50_Q2G2Q9, UniRef:UniRef90_Q2G2Q9 contig_1 cds 351573 352073 + GCA000560365_00310 esaG TIGR01741 family protein RefSeq:WP_000141942.1, SO:0001217, UniParc:UPI00000545AD, UniRef:UniRef100_Q2G2Q8, UniRef:UniRef50_Q2G2Q8, UniRef:UniRef90_Q2G2Q8, VFDB:VFC0086, VFDB:VFG049753 contig_1 cds 352084 352572 + GCA000560365_00311 TIGR01741 family protein RefSeq:WP_000142094.1, SO:0001217, UniParc:UPI00004B5ACC, UniRef:UniRef100_Q2G2Q5, UniRef:UniRef50_Q2G2Q5, UniRef:UniRef90_Q2G2Q5 contig_1 cds 353195 353569 + GCA000560365_00312 DUF4467 domain-containing protein RefSeq:WP_000822161.1, SO:0001217, UniParc:UPI00000D786E, UniRef:UniRef100_Q2G174, UniRef:UniRef50_Q2G174, UniRef:UniRef90_Q2G174 contig_1 cds 353722 354120 + GCA000560365_00313 DUF4064 domain-containing protein RefSeq:WP_000415675.1, SO:0001217, UniParc:UPI00000545A6, UniRef:UniRef100_Q2G173, UniRef:UniRef50_Q2G173, UniRef:UniRef90_Q2G173 contig_1 cds 354336 355160 - GCA000560365_00314 focA Formate/nitrite transporter COG:COG2116, COG:P, RefSeq:WP_000659770.1, SO:0001217, UniParc:UPI00000D7745, UniRef:UniRef100_Q2G172, UniRef:UniRef50_Q2G172, UniRef:UniRef90_Q2G172 contig_1 cds 355397 356704 - GCA000560365_00315 brnQ branched-chain amino acid transport system II carrier protein COG:COG1114, COG:E, GO:0015658, GO:0015803, GO:0016020, RefSeq:WP_000745099.1, SO:0001217, UniParc:UPI00000522EA, UniRef:UniRef100_Q2G171, UniRef:UniRef50_A0A391ES74, UniRef:UniRef90_A0A391ES74 contig_1 cds 357288 358178 + GCA000560365_00316 5'-nucleotidase, lipoprotein e(P4) family COG:COG2503, COG:R, GO:0009279, RefSeq:WP_001033876.1, SO:0001217, UniParc:UPI00000545A3, UniRef:UniRef100_Q2G170, UniRef:UniRef50_B9DL66, UniRef:UniRef90_A0A077UG02 contig_1 cds 358427 359476 + GCA000560365_00317 hrtB Putative hemin transport system permease protein HrtB COG:COG4591, COG:M, RefSeq:WP_000477934.1, SO:0001217, UniParc:UPI00000545A1, UniRef:UniRef100_Q2G168, UniRef:UniRef50_Q2G168, UniRef:UniRef90_Q2G168 contig_1 cds 359489 360166 + GCA000560365_00318 hrtA Putative hemin import ATP-binding protein HrtA COG:COG1136, COG:M, RefSeq:WP_000911019.1, SO:0001217, UniParc:UPI00000545A0, UniRef:UniRef100_A0A1D4ZP35, UniRef:UniRef50_A0A0Y9VH18, UniRef:UniRef90_A0A0Y9VH18 contig_1 cds 360374 361405 + GCA000560365_00319 frwC Phosphotransferase system EIIC domain-containing protein COG:COG1299, COG:G, SO:0001217, UniParc:UPI00000D9C2A, UniRef:UniRef100_A0A0H3K6N4, UniRef:UniRef50_Q2G165, UniRef:UniRef90_Q2G165 contig_1 cds 361748 362866 + GCA000560365_00320 Ribokinase RefSeq:WP_001283977.1, SO:0001217, UniParc:UPI00000D9C2B, UniRef:UniRef100_Q2G164, UniRef:UniRef50_K1L4B1, UniRef:UniRef90_A0A7I8NL06 contig_1 cds 362841 363764 + GCA000560365_00321 psuG Pseudouridine-5'-phosphate glycosidase COG:COG2313, COG:F, EC:4.2.1.70, GO:0004730, GO:0005737, GO:0016798, GO:0046113, GO:0046872, RefSeq:WP_000002068.1, SO:0001217, UniParc:UPI000005459C, UniRef:UniRef100_Q2G163, UniRef:UniRef50_Q28PY7, UniRef:UniRef90_Q8NYD0 contig_1 cds 363775 364995 + GCA000560365_00322 nupC NupC/NupG family nucleoside CNT transporter COG:COG1972, COG:F, KEGG:K11535, RefSeq:WP_001022961.1, SO:0001217, UniParc:UPI000005459B, UniRef:UniRef100_Q2G162, UniRef:UniRef50_Q2G162, UniRef:UniRef90_Q2G162 contig_1 cds 365100 366632 - GCA000560365_00323 putP Na+/proline symporter COG:COG0591, COG:E, RefSeq:WP_000665736.1, SO:0001217, UniParc:UPI00004B5ACD, UniRef:UniRef100_Q2G161, UniRef:UniRef50_Q2G161, UniRef:UniRef90_Q2G161 contig_1 cds 366672 367553 - GCA000560365_00324 nanA N-acetylneuraminate lyase COG:COG0329, COG:EM, EC:4.1.3.3, GO:0005829, GO:0005975, GO:0008747, GO:0019262, RefSeq:WP_001030738.1, SO:0001217, UniParc:UPI0000054599, UniRef:UniRef100_Q2G160, UniRef:UniRef50_Q2G160, UniRef:UniRef90_Q2G160 contig_1 cds 367711 368571 + GCA000560365_00325 nagC Glucokinase COG:COG1940, COG:GK, RefSeq:WP_000291445.1, SO:0001217, UniParc:UPI00000D9C2F, UniRef:UniRef100_Q2G159, UniRef:UniRef50_A0A2K4AIW7, UniRef:UniRef90_A0A2K4AIW7 contig_1 cds 368849 369649 - GCA000560365_00326 rpiR MurR/RpiR family transcriptional regulator COG:COG1737, COG:K, RefSeq:WP_000667382.1, SO:0001217, UniParc:UPI0000054596, UniRef:UniRef100_Q2G158, UniRef:UniRef50_Q2G158, UniRef:UniRef90_Q2G158 contig_1 cds 369789 370457 + GCA000560365_00327 nanE Putative N-acetylmannosamine-6-phosphate 2-epimerase COG:COG3010, COG:G, EC:5.1.3.9, GO:0005829, GO:0005975, GO:0006053, GO:0019262, GO:0047465, KEGG:K01788, RefSeq:WP_000936720.1, SO:0001217, UniParc:UPI0000054595, UniRef:UniRef100_Q2G157, UniRef:UniRef50_Q8XNZ3, UniRef:UniRef90_Q2G157 contig_1 cds 370584 371945 - GCA000560365_00328 spoVV Nucleoside transporter/FeoB GTPase Gate domain-containing protein COG:COG3314, COG:DE, SO:0001217, UniParc:UPI0001574440, UniRef:UniRef100_A0A0H3K5Z9, UniRef:UniRef50_Q2G156, UniRef:UniRef90_Q2G156 contig_1 cds 372315 374387 + GCA000560365_00329 geh glycerol ester hydrolase COG:COG1075, COG:I, EC:3.1.1.3, GO:0004806, GO:0005509, GO:0005576, GO:0016042, GO:0016298, GO:0046872, KEGG:K01046, RefSeq:WP_000943832.1, SO:0001217, UniParc:UPI0000696BA0, UniRef:UniRef100_A0A1S5ZZI3, UniRef:UniRef50_Q99WQ6, UniRef:UniRef90_Q99WQ6, VFDB:VFC0251, VFDB:VFG001316 contig_1 cds 374629 375456 - GCA000560365_00330 aes BD-FAE-like domain-containing protein COG:COG0657, COG:I, RefSeq:WP_000136020.1, SO:0001217, UniParc:UPI00004B5AF3, UniRef:UniRef100_Q2G154, UniRef:UniRef50_Q2G154, UniRef:UniRef90_Q2G154 contig_1 cds 375529 376728 - GCA000560365_00331 fadH NADH-dependent flavin oxidoreductase COG:C, COG:COG1902, RefSeq:WP_000286484.1, SO:0001217, UniParc:UPI0000054592, UniRef:UniRef100_Q2G153, UniRef:UniRef50_P0DN73, UniRef:UniRef90_A0A2K4AJN2 contig_1 sorf 376851 376916 + GCA000560365_00332 Transposase RefSeq:WP_031888542.1, SO:0001217, UniParc:UPI0004F35158, UniRef:UniRef100_A0A2U0IHN5, UniRef:UniRef50_A0A2I7Y8Q6, UniRef:UniRef90_Q2G152 contig_1 cds 377030 378031 + GCA000560365_00333 ssuD LLM class flavin-dependent oxidoreductase COG:COG2141, COG:HR, RefSeq:WP_000240058.1, SO:0001217, UniParc:UPI00000D9C36, UniRef:UniRef100_A0A0D6GE99, UniRef:UniRef50_A0A390B198, UniRef:UniRef90_A0A390B198 contig_1 cds 378065 378397 + GCA000560365_00334 gcvH Glycine cleavage system H-like protein COG:COG0509, COG:E, GO:0005829, GO:0005960, GO:0019464, RefSeq:WP_000731878.1, SO:0001217, UniParc:UPI000005458F, UniRef:UniRef100_A0A0H3JT43, UniRef:UniRef50_P0DN69, UniRef:UniRef90_A0A0H3JT43 contig_1 cds 378398 379198 + GCA000560365_00335 protein-ADP-ribose hydrolase EC:3.2.1.-, GO:0016798, RefSeq:WP_000449061.1, SO:0001217, UniParc:UPI00004B5AF4, UniRef:UniRef100_Q5HIW9, UniRef:UniRef50_P67343, UniRef:UniRef90_Q6GJZ1 contig_1 cds 379188 380132 + GCA000560365_00336 sIR2 Protein ADP-ribosyltransferase COG:COG0846, COG:O, EC:2.4.2.-, GO:0016779, GO:0046872, GO:0140806, GO:1990404, RefSeq:WP_001191946.1, SO:0001217, UniParc:UPI00004B5AF5, UniRef:UniRef100_Q2G148, UniRef:UniRef50_A0A0H3JQ59, UniRef:UniRef90_A0A0H3JQ59 contig_1 cds 380110 381132 + GCA000560365_00337 lplA Lipoate--protein ligase 2 COG:COG0095, COG:H, EC:6.3.1.20, GO:0005524, GO:0005737, GO:0009249, GO:0016979, GO:0017118, KEGG:K03800, RefSeq:WP_031808133.1, SO:0001217, UniParc:UPI0004526608, UniRef:UniRef100_UPI0004526608, UniRef:UniRef50_A0A0H3JX98, UniRef:UniRef90_A0A0H3JX98 contig_1 cds 381447 382472 + GCA000560365_00338 wcaG 3-beta hydroxysteroid dehydrogenase/isomerase domain-containing protein COG:COG0451, COG:M, RefSeq:WP_031808134.1, SO:0001217, UniParc:UPI000446548C, UniRef:UniRef100_UPI000446548C, UniRef:UniRef50_A0A0R2AZ52, UniRef:UniRef90_Q2G146 contig_1 cds 382565 383911 - GCA000560365_00339 ulaA PTS ascorbate transporter subunit IIC COG:COG3037, COG:G, GO:0009401, KEGG:K03475, RefSeq:WP_001147970.1, SO:0001217, UniParc:UPI0000054589, UniRef:UniRef100_Q2G145, UniRef:UniRef50_A0A088T0Z9, UniRef:UniRef90_A0A454H3A5 contig_1 cds 383926 384210 - GCA000560365_00340 sgaB PTS lactose transporter subunit IIB COG:COG3414, COG:G, RefSeq:WP_000699538.1, SO:0001217, UniParc:UPI00000D7893, UniRef:UniRef100_Q2G144, UniRef:UniRef50_A0A2S6D6E6, UniRef:UniRef90_A0A2S6D6E6 contig_1 cds 384212 384655 - GCA000560365_00341 ptsN Ascorbate-specific PTS system EIIA component COG:COG1762, COG:GT, RefSeq:WP_000050762.1, SO:0001217, UniParc:UPI00000D9C3C, UniRef:UniRef100_Q2G143, UniRef:UniRef50_A0A391DBH8, UniRef:UniRef90_A0A391DBH8 contig_1 cds 384660 386615 - GCA000560365_00342 bglG BglG family transcription antiterminator COG:COG3711, COG:K, RefSeq:WP_000954261.1, SO:0001217, UniParc:UPI00000D9C3D, UniRef:UniRef100_Q2G142, UniRef:UniRef50_A0A391EL22, UniRef:UniRef90_A0A391EL22 contig_1 cds 386827 387246 + GCA000560365_00343 mepR multidrug efflux transporter transcriptional repressor MepR BlastRules:WP_000397416, COG:COG1846, COG:K, KEGG:K18909, RefSeq:WP_000397416.1, SO:0001217, UniParc:UPI0000054585, UniRef:UniRef100_Q2G141, UniRef:UniRef50_Q2G141, UniRef:UniRef90_Q2G141 contig_1 cds 387353 388708 + GCA000560365_00344 mepA multidrug efflux MATE transporter MepA COG:COG0534, COG:V, GO:0005886, GO:0015297, GO:0042910, GO:0046677, KEGG:K18908, NCBIProtein:AAU95768.1, RefSeq:WP_000651060.1, SO:0001217, UniParc:UPI0000054584, UniRef:UniRef100_Q2G140, UniRef:UniRef50_Q2G140, UniRef:UniRef90_Q2G140 contig_1 cds 388812 389252 + GCA000560365_00345 Multidrug transporter RefSeq:WP_000335332.1, SO:0001217, UniParc:UPI0000054582, UniRef:UniRef100_Q2G139, UniRef:UniRef50_Q2G139, UniRef:UniRef90_Q2G139 contig_1 cds 389335 390693 - GCA000560365_00346 glpT glycerol-3-phosphate transporter GlpT COG:COG2271, COG:G, GO:0015169, GO:0015794, GO:0016020, KEGG:K02445, RefSeq:WP_001010111.1, SO:0001217, UniParc:UPI0000054581, UniRef:UniRef100_Q2G138, UniRef:UniRef50_Q9HTV5, UniRef:UniRef90_Q2G138 contig_1 cds 391001 391927 + GCA000560365_00347 gloA Lactoylglutathione lyase COG:COG0346, COG:Q, RefSeq:WP_001028221.1, SO:0001217, UniParc:UPI0000696BA3, UniRef:UniRef100_Q2G137, UniRef:UniRef50_A0A077UG87, UniRef:UniRef90_A0A077UG87 contig_1 cds 391941 393002 + GCA000560365_00348 ssuD LLM class flavin-dependent oxidoreductase COG:COG2141, COG:HR, RefSeq:WP_001096116.1, SO:0001217, UniParc:UPI00004B5AFA, UniRef:UniRef100_Q2G136, UniRef:UniRef50_A0A391E2C4, UniRef:UniRef90_A0A391E2C4 contig_1 cds 393016 393582 + GCA000560365_00349 ssuE FMN-dependent NADPH-azoreductase COG:C, COG:COG0431, RefSeq:WP_001028431.1, SO:0001217, UniParc:UPI00000D9C42, UniRef:UniRef100_Q2G135, UniRef:UniRef50_A0A390B1M0, UniRef:UniRef90_A0A390B1M0 contig_1 cds 393642 394637 - GCA000560365_00350 yeiH UPF0324 membrane protein SACOL0411 COG:COG2855, COG:S, GO:0005886, RefSeq:WP_000157629.1, SO:0001217, UniParc:UPI000005457D, UniRef:UniRef100_Q5HIV4, UniRef:UniRef50_Q5HRT2, UniRef:UniRef90_Q7A7M5 contig_1 ncRNA 394763 395016 - GCA000560365_00351 S35 Staphylococcus sRNA 35 (srn_0335) RFAM:RF02894, SO:0000655 contig_1 cds 395056 395601 + GCA000560365_00352 rimL 50S ribosomal protein L7 serine acetyltransferase COG:COG1670, COG:JO, RefSeq:WP_000467652.1, SO:0001217, UniParc:UPI000005457B, UniRef:UniRef100_Q2G132, UniRef:UniRef50_A0A2S6DUP1, UniRef:UniRef90_A0A2S6DUP1 contig_1 cds 395869 396723 + GCA000560365_00353 efeO iron uptake system protein EfeO COG:COG2822, COG:P, GO:0005886, GO:0006826, KEGG:K07224, RefSeq:WP_000737193.1, SO:0001217, UniParc:UPI0000696BA5, UniRef:UniRef100_Q2FJS0, UniRef:UniRef50_Q4L8N2, UniRef:UniRef90_Q2G131 contig_1 cds 396720 397949 + GCA000560365_00354 efeB iron uptake transporter deferrochelatase/peroxidase subunit COG:COG2837, COG:P, EC:1.11.1.-, EC:4.98.1.1, GO:0004601, GO:0020037, GO:0033212, KEGG:K16301, RefSeq:WP_000186217.1, SO:0001217, UniParc:UPI00004B5AFC, UniRef:UniRef100_Q2G130, UniRef:UniRef50_A0A390V9S3, UniRef:UniRef90_A0A390V9S3 contig_1 cds 397930 399642 + GCA000560365_00355 fTR1 FTR1 family iron permease COG:COG0672, COG:P, RefSeq:WP_000683699.1, SO:0001217, UniParc:UPI00000522EB, UniRef:UniRef100_Q2G129, UniRef:UniRef50_A0A4Z1BRH1, UniRef:UniRef90_Q2G129 contig_1 cds 399734 400339 - GCA000560365_00356 tatC twin-arginine translocase subunit TatC COG:COG0805, COG:U, GO:0005886, GO:0015628, KEGG:K03118, SO:0001217, UniParc:UPI0001E071DB, UniRef:UniRef100_A0A2I7Y8N3, UniRef:UniRef50_A0A2S6D619, UniRef:UniRef90_A0A6B5BEK4 contig_1 cds 400452 400667 - GCA000560365_00357 tatA Sec-independent protein translocase protein TatA COG:COG1826, COG:U, RefSeq:WP_000632271.1, SO:0001217, UniParc:UPI00000D78AF, UniRef:UniRef100_Q2G127, UniRef:UniRef50_A0A380FX86, UniRef:UniRef90_A0AAN1ZPU7 contig_1 cds 400776 401165 - GCA000560365_00358 ybcV DUF1398 domain-containing protein COG:COG5562, COG:X, RefSeq:WP_000886005.1, SO:0001217, UniParc:UPI0000054574, UniRef:UniRef100_Q2G126, UniRef:UniRef50_Q2G126, UniRef:UniRef90_Q2G126 contig_1 cds 401406 401609 + GCA000560365_00359 xRE HTH cro/C1-type domain-containing protein COG:COG1476, COG:K, RefSeq:WP_001246013.1, SO:0001217, UniParc:UPI00004B5AFE, UniRef:UniRef100_Q2G1V7, UniRef:UniRef50_Q2G1V7, UniRef:UniRef90_Q2G1V7 contig_1 cds 401606 402319 + GCA000560365_00360 DUF3169 domain-containing protein RefSeq:WP_000698752.1, SO:0001217, UniParc:UPI0000054572, UniRef:UniRef100_Q2G1V5, UniRef:UniRef50_Q2G1V5, UniRef:UniRef90_Q2G1V5 contig_1 cds 402344 403186 + GCA000560365_00361 rbbA ABC superfamily ATP binding cassette transporter, ABC protein COG:COG1131, COG:JV, RefSeq:WP_000209565.1, SO:0001217, UniParc:UPI00004B5AFF, UniRef:UniRef100_Q2G1V4, UniRef:UniRef50_A0A1D4LL40, UniRef:UniRef90_A0A390TZ70 contig_1 cds 403186 403815 + GCA000560365_00362 ABC-2 transporter permease RefSeq:WP_000677714.1, SO:0001217, UniParc:UPI00004B5B00, UniRef:UniRef100_A0A0D3Q4P4, UniRef:UniRef50_Q2G1V6, UniRef:UniRef90_Q2G1V6 contig_1 cds 404182 405315 - GCA000560365_00363 ltrA Low temperature requirement protein A COG:COG4292, COG:S, RefSeq:WP_031808135.1, SO:0001217, UniParc:UPI00044730AE, UniRef:UniRef100_UPI00044730AE, UniRef:UniRef50_Q2G1V3, UniRef:UniRef90_Q2G1V3 contig_1 cds 405854 407035 + GCA000560365_00364 paaJ putative acetyl-CoA acyltransferase COG:COG0183, COG:I, EC:2.3.1.9, GO:0003985, GO:0005737, RefSeq:WP_000199070.1, SO:0001217, UniParc:UPI000005456C, UniRef:UniRef100_Q2G124, UniRef:UniRef50_Q2G124, UniRef:UniRef90_Q2G124 contig_1 cds 407118 407870 - GCA000560365_00365 Cyclase family protein COG:COG1878, COG:E, RefSeq:WP_000195907.1, SO:0001217, UniParc:UPI000005456B, UniRef:UniRef100_Q2G123, UniRef:UniRef50_Q2G123, UniRef:UniRef90_Q2G123 contig_1 cds 407913 410141 - GCA000560365_00366 metE 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase COG:COG0620, COG:E, EC:2.1.1.14, GO:0003871, GO:0008270, GO:0009086, GO:0032259, KEGG:K00549, RefSeq:WP_000207614.1, SO:0001217, UniParc:UPI0000052272, UniRef:UniRef100_Q2G122, UniRef:UniRef50_Q8CWX6, UniRef:UniRef90_Q2G122 contig_1 cds 410138 411979 - GCA000560365_00367 metF bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase COG:COG0685, COG:E, EC:1.5.1.20, EC:2.1.1.10, RefSeq:WP_000077318.1, SO:0001217, UniParc:UPI000005456A, UniRef:UniRef100_Q2G121, UniRef:UniRef50_A0A7U7JSP7, UniRef:UniRef90_A0A7U7JSP7 contig_1 cds 411948 413108 - GCA000560365_00368 metC cystathionine beta-lyase MetC COG:COG0626, COG:E, EC:4.4.1.13, GO:0009086, GO:0030170, GO:0047804, RefSeq:WP_000175846.1, SO:0001217, UniParc:UPI0000054569, UniRef:UniRef100_Q2G120, UniRef:UniRef50_Q4L332, UniRef:UniRef90_A0A7U7JSH1 contig_1 cds 413105 414208 - GCA000560365_00369 metC Cystathionine gamma-synthase and O-acetylhomoserine thiolyase COG:COG0626, COG:E, RefSeq:WP_000655692.1, SO:0001217, UniParc:UPI0000054568, UniRef:UniRef100_Q2G119, UniRef:UniRef50_A0A7U7JSJ6, UniRef:UniRef90_A0A7U7JSJ6 contig_1 ncRNA-region 414274 414643 - T-box leader RFAM:RF00230, SO:0000140 contig_1 cds 414872 415717 + GCA000560365_00370 spo0J Chromosome/plasmid partitioning protein ParB COG:COG1475, COG:D, KEGG:K03497, RefSeq:WP_001550052.1, SO:0001217, UniParc:UPI00004B5B02, UniRef:UniRef100_Q2G118, UniRef:UniRef50_A0A390ZJY4, UniRef:UniRef90_A0A390ZJY4 contig_1 cds 415874 416755 + GCA000560365_00371 mscS Mechanosensitive ion channel family protein COG:COG0668, COG:M, RefSeq:WP_001077602.1, SO:0001217, UniParc:UPI0000054565, UniRef:UniRef100_Q2G117, UniRef:UniRef50_Q2G117, UniRef:UniRef90_Q2G117 contig_1 cds 416785 416988 + GCA000560365_00372 Cytosolic protein COG:COG4481, COG:S, RefSeq:WP_000157345.1, SO:0001217, UniParc:UPI0000054563, UniRef:UniRef100_Q2G116, UniRef:UniRef50_Q2G116, UniRef:UniRef90_Q2G116 contig_1 cds 417000 418097 + GCA000560365_00373 ychF redox-regulated ATPase YchF COG:COG0012, COG:J, GO:0005524, GO:0005525, GO:0016887, RefSeq:WP_001218732.1, SO:0001217, UniParc:UPI0000054562, UniRef:UniRef100_Q2G115, UniRef:UniRef50_P0ABU2, UniRef:UniRef90_A0A654CN84 contig_1 cds 418183 418374 - GCA000560365_00374 hypothetical protein RefSeq:WP_001052483.1, SO:0001217, UniParc:UPI0000054561, UniRef:UniRef100_Q2G114, UniRef:UniRef50_Q2G114, UniRef:UniRef90_Q2G114 contig_1 cds 418618 418914 + GCA000560365_00375 rpsF 30S ribosomal protein S6 COG:COG0360, COG:J, GO:0000314, GO:0003735, GO:0005737, GO:0005840, GO:0006412, GO:0022627, GO:0070181, GO:1990904, KEGG:K02990, RefSeq:WP_001261460.1, SO:0001217, UniParc:UPI0000048022, UniRef:UniRef100_Q2G113, UniRef:UniRef50_P21468, UniRef:UniRef90_Q2G113 contig_1 cds 418935 419438 + GCA000560365_00376 ssb Single-stranded DNA-binding protein 1 COG:COG0629, COG:L, GO:0003697, GO:0006260, GO:0006281, GO:0006310, GO:0009295, RefSeq:WP_000934799.1, SO:0001217, UniParc:UPI0000054560, UniRef:UniRef100_Q5HIS8, UniRef:UniRef50_Q5HIS8, UniRef:UniRef90_Q5HIS8 contig_1 cds 419490 419732 + GCA000560365_00377 rpsR 30S ribosomal protein S18 COG:COG0238, COG:J, GO:0000314, GO:0003735, GO:0006412, GO:0022627, GO:0070181, KEGG:K02963, RefSeq:WP_000897044.1, SO:0001217, UniParc:UPI000004802A, UniRef:UniRef100_Q2G111, UniRef:UniRef50_P21475, UniRef:UniRef90_Q2G111 contig_1 ncRNA 419892 419987 - GCA000560365_00378 sau-5971 Staphylococcus sRNA sau-5971 RFAM:RF02397, SO:0000655 contig_1 cds 419998 420972 - GCA000560365_00379 abiF Abi family protein COG:COG4823, COG:V, SO:0001217, UniParc:UPI00015743DE, UniRef:UniRef100_Q2G110, UniRef:UniRef50_Q2G110, UniRef:UniRef90_Q2G110 contig_1 cds 420975 421265 - GCA000560365_00380 Integrase-like protein SO:0001217, UniParc:UPI0001699014, UniRef:UniRef100_A0A2X3R8A2, UniRef:UniRef50_A0A2X3R8A2, UniRef:UniRef90_A0A2X3R8A2 contig_1 cds 421882 422493 + GCA000560365_00381 selX staphylococcal enterotoxin-like toxin X GO:0005576, NCBIProtein:AEI60187.1, RefSeq:WP_000475326.1, SO:0001217, UniParc:UPI000005455C, UniRef:UniRef100_Q2G107, UniRef:UniRef50_G0Z026, UniRef:UniRef90_G0Z026 contig_1 cds 422862 423230 + GCA000560365_00382 yxeA YxeA family protein RefSeq:WP_000849177.1, SO:0001217, UniParc:UPI00004B5B05, UniRef:UniRef100_Q2G106, UniRef:UniRef50_Q2G106, UniRef:UniRef90_Q2G106 contig_1 cds 423411 423983 + GCA000560365_00383 ykoI PepSY domain-containing protein COG:COG3212, COG:O, RefSeq:WP_000769720.1, SO:0001217, UniParc:UPI00000522B3, UniRef:UniRef100_Q2G105, UniRef:UniRef50_Q2G105, UniRef:UniRef90_Q2G105 contig_1 cds 424121 424384 - GCA000560365_00384 HTH cro/C1-type domain-containing protein RefSeq:WP_001055897.1, SO:0001217, UniParc:UPI0000054559, UniRef:UniRef100_Q2G104, UniRef:UniRef50_Q2G104, UniRef:UniRef90_Q2G104 contig_1 cds 424684 424935 + GCA000560365_00385 yeaQ GlsB/YeaQ/YmgE family stress response membrane protein COG:COG2261, COG:R, RefSeq:WP_000466748.1, SO:0001217, UniParc:UPI0000054558, UniRef:UniRef100_Q2G103, UniRef:UniRef50_Q2G103, UniRef:UniRef90_Q2G103 contig_1 ncRNA 425111 425214 - GCA000560365_00386 sRNA71 Staphylococcus sRNA71 small RNA RFAM:RF03534, SO:0000655 contig_1 cds 425361 425942 + GCA000560365_00387 phoE phosphoglycerate mutase (2,3-diphosphoglycerate-dependent) COG:COG0406, COG:G, RefSeq:WP_000158371.1, SO:0001217, UniParc:UPI00015FD6F1, UniRef:UniRef100_A0A5A8VH67, UniRef:UniRef50_A0A380CV51, UniRef:UniRef90_Q2G101 contig_1 cds 426008 426394 - GCA000560365_00388 hypothetical protein SO:0001217, UniParc:UPI0002B9E232, UniRef:UniRef100_Q2G100, UniRef:UniRef50_A0A2K4AJS7, UniRef:UniRef90_Q2G100 contig_1 cds 426646 427272 - GCA000560365_00389 NDxxF motif lipoprotein RefSeq:WP_000746687.1, SO:0001217, UniParc:UPI0000054555, UniRef:UniRef100_Q2G0Z9, UniRef:UniRef50_Q4L374, UniRef:UniRef90_Q2G0Z9 contig_1 cds 427345 427602 - GCA000560365_00390 Bacteriocin immunity protein SO:0001217, UniParc:UPI0001699011, UniRef:UniRef100_Q2G0Z8, UniRef:UniRef50_A0A6A9H4G7, UniRef:UniRef90_Q2G0Z8 contig_1 cds 427717 429240 - GCA000560365_00391 ahpF alkyl hydroperoxide reductase subunit F COG:COG3634, COG:V, EC:1.8.1.-, GO:0000302, GO:0008785, GO:0016668, GO:0050660, GO:0051287, GO:0102039, RefSeq:WP_000930486.1, SO:0001217, UniParc:UPI0000054553, UniRef:UniRef100_O05204, UniRef:UniRef50_O05204, UniRef:UniRef90_O05204 contig_1 cds 429256 429825 - GCA000560365_00392 ahpC alkyl hydroperoxide reductase subunit C COG:COG0450, COG:V, EC:1.11.1.26, GO:0005829, GO:0006979, GO:0008379, GO:0033554, GO:0042744, GO:0045454, GO:0102039, KEGG:K24119, RefSeq:WP_000052781.1, SO:0001217, UniParc:UPI0000054552, UniRef:UniRef100_P0A0B7, UniRef:UniRef50_K0J4Q8, UniRef:UniRef90_P0A0B7 contig_1 cds 430266 431072 + GCA000560365_00393 nfsA oxygen-insensitive NADPH nitroreductase COG:C, COG:COG0778, EC:1.6.-.-, GO:0016491, SO:0001217, UniParc:UPI00015FD6F2, UniRef:UniRef100_A0A0D6GCI3, UniRef:UniRef50_Q2G0Z5, UniRef:UniRef90_Q2G0Z5 contig_1 cds 431153 432541 - GCA000560365_00394 tcyP L-cystine uptake protein TcyP COG:COG1823, COG:E, RefSeq:WP_000991007.1, SO:0001217, UniParc:UPI00004B5B08, UniRef:UniRef100_Q2G0Z4, UniRef:UniRef50_P54596, UniRef:UniRef90_A0A7U7JSI4 contig_1 cds 433518 434474 - GCA000560365_00395 putative protein SAV0385 RefSeq:WP_000956132.1, SO:0001217, UniParc:UPI000005454D, UniRef:UniRef100_Q2G0Z2, UniRef:UniRef50_P60855, UniRef:UniRef90_P60855 contig_1 cds 434592 435254 - GCA000560365_00396 N-acetyltransferase domain-containing protein RefSeq:WP_000394698.1, SO:0001217, UniParc:UPI000005454C, UniRef:UniRef100_Q2G0Z1, UniRef:UniRef50_K9B354, UniRef:UniRef90_Q2G0Z1 contig_1 cds 435397 435804 - GCA000560365_00397 UPF0355 protein MW0363 RefSeq:WP_000763768.1, SO:0001217, UniParc:UPI000005454B, UniRef:UniRef100_Q5HIR0, UniRef:UniRef50_Q4L382, UniRef:UniRef90_Q99WJ2 contig_1 ncRNA-region 435984 436086 + Purine riboswitch aptamer RFAM:RF00167, SO:0000035 contig_1 cds 436317 436895 + GCA000560365_00398 xpt xanthine phosphoribosyltransferase COG:COG0503, COG:F, EC:2.4.2.22, GO:0000310, GO:0005737, GO:0006166, GO:0032265, GO:0043101, GO:0046110, KEGG:K03816, RefSeq:WP_000421410.1, SO:0001217, UniParc:UPI00000D77B2, UniRef:UniRef100_Q2G0Y9, UniRef:UniRef50_Q2G0Y9, UniRef:UniRef90_Q2G0Y9 contig_1 cds 436895 438163 + GCA000560365_00399 uraA Xanthine permease COG:COG2233, COG:F, RefSeq:WP_000793009.1, SO:0001217, UniParc:UPI0000054549, UniRef:UniRef100_Q2G0Y8, UniRef:UniRef50_P42086, UniRef:UniRef90_A0A1J6I5H8 contig_1 cds 438201 439667 + GCA000560365_00400 guaB IMP dehydrogenase COG:COG3448, COG:T, EC:1.1.1.205, GO:0000166, GO:0003938, GO:0006164, GO:0006177, GO:0006183, GO:0046872, KEGG:K00088, RefSeq:WP_031808136.1, SO:0001217, UniParc:UPI000447E682, UniRef:UniRef100_UPI000447E682, UniRef:UniRef50_Q2G0Y7, UniRef:UniRef90_Q2G0Y7 contig_1 cds 439692 441233 + GCA000560365_00401 guaA glutamine-hydrolyzing GMP synthase COG:COG0519, COG:F, EC:6.3.5.2, GO:0003921, GO:0003922, GO:0005524, GO:0005829, GO:0006177, GO:0016462, KEGG:K01951, RefSeq:WP_000424966.1, SO:0001217, UniParc:UPI0000054547, UniRef:UniRef100_Q2G0Y6, UniRef:UniRef50_Q2G0Y6, UniRef:UniRef90_Q2G0Y6 contig_1 cds 441346 441882 - GCA000560365_00402 Phage protein RefSeq:WP_000551776.1, SO:0001217, UniParc:UPI0000054545, UniRef:UniRef100_Q2G0Y5, UniRef:UniRef50_Q2G0Y5, UniRef:UniRef90_Q2G0Y5 contig_1 ncRNA 442146 442243 - GCA000560365_00403 sau-63 Staphylococcus sRNA sau-63 RFAM:RF02394, SO:0000655 contig_1 cds 442275 442979 - GCA000560365_00404 mazF Endoribonuclease MazF RefSeq:WP_000041883.1, SO:0001217, UniParc:UPI0000054544, UniRef:UniRef100_Q2G0Y4, UniRef:UniRef50_A0A389Q5H3, UniRef:UniRef90_A0A389Q5H3 contig_1 cds 443378 443650 - GCA000560365_00405 insE Transposase COG:COG2963, COG:X, RefSeq:WP_000159787.1, SO:0001217, UniParc:UPI0000054543, UniRef:UniRef100_Q2G0Y3, UniRef:UniRef50_Q2G0Y3, UniRef:UniRef90_Q2G0Y3 contig_1 cds 443911 444063 - GCA000560365_00406 hypothetical protein RefSeq:WP_000248839.1, SO:0001217, UniParc:UPI00004B5B09, UniRef:UniRef100_X5EGX9, UniRef:UniRef50_A0A6B1RMS0, UniRef:UniRef90_A0A2S6DG16 contig_1 ncRNA-region 444282 444341 + Staphylococcus aureus small RNA TEG147 RFAM:RF03535, SO:0005836 contig_1 cds 444587 444946 - GCA000560365_00407 DUF1304 domain-containing protein COG:COG3759, COG:S, KEGG:K08987, RefSeq:WP_001021622.1, SO:0001217, UniParc:UPI00004B5B0A, UniRef:UniRef100_Q2G0Y1, UniRef:UniRef50_Q2G0Y1, UniRef:UniRef90_Q2G0Y1 contig_1 cds 444965 445810 - GCA000560365_00408 ybjT Cobalt (Co2+) ABC superfamily ATP binding cassette transporter, membrane protein COG:COG0702, COG:R, RefSeq:WP_001024377.1, SO:0001217, UniParc:UPI0000054540, UniRef:UniRef100_Q2G0Y0, UniRef:UniRef50_A0A0D0RS60, UniRef:UniRef90_A0A391A2R3 contig_1 cds 446282 446962 + GCA000560365_00409 ssl1 superantigen-like protein SSL1 EC:3.4.21.-, GO:0005576, GO:0006508, GO:0008233, KEGG:K11042, RefSeq:WP_000669005.1, SO:0001217, UniParc:UPI00004B5B0B, UniRef:UniRef100_Q2G0X9, UniRef:UniRef50_Q2G0X9, UniRef:UniRef90_Q2G0X9 contig_1 cds 447248 447943 + GCA000560365_00410 set17 superantigen-like protein SSL2 RefSeq:WP_000782618.1, SO:0001217, UniParc:UPI00000522B4, UniRef:UniRef100_Q2G0X8, UniRef:UniRef50_Q2G0X8, UniRef:UniRef90_Q2G0X8, VFDB:VFC0235, VFDB:VFG004928 contig_1 cds 448234 449292 + GCA000560365_00411 set18 superantigen-like protein SSL3 GO:0005576, RefSeq:WP_000784024.1, SO:0001217, UniParc:UPI0000052313, UniRef:UniRef100_A0A0H3KEE1, UniRef:UniRef50_Q2G0X7, UniRef:UniRef90_Q2G0X7, VFDB:VFC0235, VFDB:VFG004925 contig_1 cds 449657 450583 + GCA000560365_00412 set19 superantigen-like protein SSL4 GO:0005576, RefSeq:WP_000705644.1, SO:0001217, UniParc:UPI0000696BA9, UniRef:UniRef100_A0A0H3K6A3, UniRef:UniRef50_Q2G0X7, UniRef:UniRef90_Q2G1S8, VFDB:VFC0235, VFDB:VFG004922 contig_1 cds 450947 451651 + GCA000560365_00413 set20 superantigen-like protein SSL5 GO:0005576, KEGG:K23587, RefSeq:WP_000784244.1, SO:0001217, UniParc:UPI0000696BAA, UniRef:UniRef100_Q2G1S6, UniRef:UniRef50_Q2G1S6, UniRef:UniRef90_Q2G1S6, VFDB:VFC0235, VFDB:VFG004920 contig_1 cds 452097 452792 + GCA000560365_00414 superantigen-like protein SSL6 RefSeq:WP_000769845.1, SO:0001217, UniParc:UPI0000054539, UniRef:UniRef100_Q2G1S5, UniRef:UniRef50_Q2G1S5, UniRef:UniRef90_Q2G1S5 contig_1 cds 453213 453908 + GCA000560365_00415 set22 superantigen-like protein SSL7 GO:0005576, RefSeq:WP_000769836.1, SO:0001217, UniParc:UPI00000B2912, UniRef:UniRef100_Q2G2Y0, UniRef:UniRef50_Q2G2Y0, UniRef:UniRef90_Q2G2Y0, VFDB:VFC0235, VFDB:VFG004915 contig_1 cds 454252 454950 + GCA000560365_00416 set23 superantigen-like protein SSL8 RefSeq:WP_000673479.1, SO:0001217, UniParc:UPI0000696BAB, UniRef:UniRef100_Q2G2X9, UniRef:UniRef50_Q2G2X9, UniRef:UniRef90_Q2G2X9, VFDB:VFC0235, VFDB:VFG004912 contig_1 cds 455330 456028 + GCA000560365_00417 set24 superantigen-like protein SSL9 RefSeq:WP_000779446.1, SO:0001217, UniParc:UPI00004B5B0C, UniRef:UniRef100_Q2G2X8, UniRef:UniRef50_Q2G2X9, UniRef:UniRef90_Q2G2X8, VFDB:VFC0235, VFDB:VFG004909 contig_1 cds 456394 457077 + GCA000560365_00418 set25 superantigen-like protein SSL10 GO:0005576, RefSeq:WP_000673051.1, SO:0001217, UniParc:UPI00000CAB82, UniRef:UniRef100_Q2G2X7, UniRef:UniRef50_Q2G2X7, UniRef:UniRef90_Q2G2X7, VFDB:VFC0235, VFDB:VFG004906 contig_1 cds 457341 458897 + GCA000560365_00419 hsdM type I restriction-modification system subunit M COG:COG0286, COG:V, EC:2.1.1.72, GO:0003677, GO:0009007, GO:0009307, KEGG:K03427, RefSeq:WP_000028628.1, SO:0001217, UniParc:UPI0000054532, UniRef:UniRef100_Q2G0X6, UniRef:UniRef50_B1BVR9, UniRef:UniRef90_A0A0H3JSX7 contig_1 cds 458890 460101 + GCA000560365_00420 hsdS Restriction endonuclease subunit S COG:COG0732, COG:V, EC:3.1.21.3, KEGG:K01154, RefSeq:WP_000072584.1, SO:0001217, UniParc:UPI0000054531, UniRef:UniRef100_Q2G0X5, UniRef:UniRef50_B0FFT9, UniRef:UniRef90_A0A6G4Q6L6 contig_1 cds 460484 461161 + GCA000560365_00421 ssl11 superantigen-like protein SSL11 GO:0005576, KEGG:K23587, RefSeq:WP_000769163.1, SO:0001217, UniParc:UPI0000054530, UniRef:UniRef100_Q2G0X4, UniRef:UniRef50_A8E1U5, UniRef:UniRef90_Q2G0X4 contig_1 cds 461183 462691 + GCA000560365_00422 FKLRK protein BlastRules:WP_001208887, BlastRules:WP_001208912, BlastRules:WP_001208927, RefSeq:WP_001208912.1, SO:0001217, UniParc:UPI000005452F, UniRef:UniRef100_Q2G0X3, UniRef:UniRef50_A0A418JJR9, UniRef:UniRef90_Q2G0X3 contig_1 cds 462794 463102 - GCA000560365_00423 spn myeloperoxidase inhibitor SPIN BlastRules:WP_001667246, RefSeq:WP_000669519.1, SO:0001217, UniParc:UPI00000C7F58, UniRef:UniRef100_Q2G0X2, UniRef:UniRef50_A0A2A4GXB5, UniRef:UniRef90_Q2G0X2 contig_1 cds 463440 464243 + GCA000560365_00424 lpl1 tandem-type lipoprotein Lpl1 BlastRules:WP_047335196, GO:0005886, SO:0001217, UniParc:UPI0000696BAC, UniRef:UniRef100_Q2FJK4, UniRef:UniRef50_Q7A7G6, UniRef:UniRef90_Q2FJK4 contig_1 cds 464274 465074 + GCA000560365_00425 lpl2 tandem-type lipoprotein Lpl2 BlastRules:WP_001269759, GO:0005886, RefSeq:WP_001269759.1, SO:0001217, UniParc:UPI0000696BAD, UniRef:UniRef100_Q2FJK3, UniRef:UniRef50_Q7A7G6, UniRef:UniRef90_Q2FJK3 contig_1 cds 465093 465566 + GCA000560365_00426 Tandem lipoprotein SO:0001217, UniParc:UPI00015743F2, UniRef:UniRef100_A0A0D6G9J2, UniRef:UniRef50_A0A380DLS6, UniRef:UniRef90_A0A0D6G9J2 contig_1 cds 465946 466749 + GCA000560365_00427 lpl4 tandem-type lipoprotein Lpl4 BlastRules:WP_000971990, GO:0005886, RefSeq:WP_000971990.1, SO:0001217, UniParc:UPI0000696BAE, UniRef:UniRef100_Q2FJK2, UniRef:UniRef50_Q7A7G6, UniRef:UniRef90_Q2FJK2 contig_1 cds 466768 467538 + GCA000560365_00428 lpl5 tandem-type lipoprotein Lpl5 BlastRules:WP_000835992, GO:0005886, RefSeq:WP_000835991.1, SO:0001217, UniParc:UPI00015FD701, UniRef:UniRef100_A0A1S5Z0L0, UniRef:UniRef50_Q7A7G6, UniRef:UniRef90_Q5HIN6 contig_1 cds 467570 468361 + GCA000560365_00429 lpl6 tandem-type lipoprotein Lpl6 BlastRules:WP_000456139, GO:0005886, RefSeq:WP_000456139.1, SO:0001217, UniParc:UPI0000696BB0, UniRef:UniRef100_Q2FJK0, UniRef:UniRef50_Q2YVQ6, UniRef:UniRef90_Q2YVQ6 contig_1 cds 468431 469207 + GCA000560365_00430 lpl7 tandem-type lipoprotein Lpl7 BlastRules:WP_000649608, GO:0005886, RefSeq:WP_000649608.1, SO:0001217, UniParc:UPI00004B5B11, UniRef:UniRef100_Q2FJJ9, UniRef:UniRef50_Q2YVQ6, UniRef:UniRef90_Q2FJJ9 contig_1 cds 469383 470198 + GCA000560365_00431 lpl8 tandem-type lipoprotein Lpl8 BlastRules:WP_001797296, GO:0005886, SO:0001217, UniParc:UPI00004B5B12, UniRef:UniRef100_Q2FJJ8, UniRef:UniRef50_Q7A7G6, UniRef:UniRef90_Q2G0X1 contig_1 cds 470217 471002 + GCA000560365_00432 lpl9 tandem-type lipoprotein Lpl9 BlastRules:WP_000835976, GO:0005886, RefSeq:WP_000835976.1, SO:0001217, UniParc:UPI000005452C, UniRef:UniRef100_Q2G0X0, UniRef:UniRef50_Q2G0X0, UniRef:UniRef90_Q2G0X0 contig_1 cds 471182 471997 + GCA000560365_00433 lpl10 tandem-type lipoprotein Lpl10 BlastRules:WP_001801842, GO:0005886, SO:0001217, UniParc:UPI00015FD702, UniRef:UniRef100_Q2FJJ6, UniRef:UniRef50_Q7A7G6, UniRef:UniRef90_Q2G0W9 contig_1 cds 471987 473315 + GCA000560365_00434 Cytosolic protein RefSeq:WP_000952537.1, SO:0001217, UniParc:UPI0000696BB2, UniRef:UniRef100_Q2G0W8, UniRef:UniRef50_A0A6A9GY48, UniRef:UniRef90_Q2G0W8 contig_1 cds 473312 473635 + GCA000560365_00435 Cytosolic protein RefSeq:WP_000971498.1, SO:0001217, UniParc:UPI0000054529, UniRef:UniRef100_Q2G0W7, UniRef:UniRef50_Q2G0W7, UniRef:UniRef90_Q2G0W7 contig_1 cds 473654 473968 + GCA000560365_00436 hypothetical protein RefSeq:WP_000172543.1, SO:0001217, UniParc:UPI0000054527, UniRef:UniRef100_Q2G0W6, UniRef:UniRef50_Q2G0W6, UniRef:UniRef90_Q2G0W6 contig_1 cds 474258 474452 - GCA000560365_00437 hypothetical protein SO:0001217, UniParc:UPI00015743F5, UniRef:UniRef100_Q2G0W5, UniRef:UniRef50_Q2G0W5, UniRef:UniRef90_Q2G0W5 contig_1 cds 474637 475839 + GCA000560365_00438 yejR CobW C-terminal domain-containing protein COG:COG0523, COG:R, RefSeq:WP_001062982.1, SO:0001217, UniParc:UPI0000054525, UniRef:UniRef100_Q2G0W4, UniRef:UniRef50_P94400, UniRef:UniRef90_Q2G0W4 contig_1 ncRNA 476433 476588 - GCA000560365_00439 sau-41 Staphylococcus sRNA sau-41 RFAM:RF02390, SO:0000655 contig_1 sorf 476498 476560 - GCA000560365_00440 psmA4 Phenol-soluble modulin alpha 4 peptide GO:0031640, RefSeq:WP_014532416.1, SO:0001217, UniParc:UPI000161A44A, UniRef:UniRef100_P0C818, UniRef:UniRef50_P0C818, UniRef:UniRef90_P0C818 contig_1 sorf 476624 476692 - GCA000560365_00441 psmA3 Phenol-soluble modulin alpha 3 peptide GO:0031640, RefSeq:WP_014373779.1, SO:0001217, UniParc:UPI000161A449, UniRef:UniRef100_P0C805, UniRef:UniRef50_P0C805, UniRef:UniRef90_P0C805 contig_1 sorf 476744 476809 - GCA000560365_00442 psmA2 Phenol-soluble modulin alpha 2 peptide GO:0031640, RefSeq:WP_014373780.1, SO:0001217, UniParc:UPI00015FD703, UniRef:UniRef100_P0C7Z3, UniRef:UniRef50_P0C7Z3, UniRef:UniRef90_P0C7Z3 contig_1 sorf 476841 476906 - GCA000560365_00443 psmA1 Phenol-soluble modulin alpha 1 peptide GO:0031640, RefSeq:WP_014373781.1, SO:0001217, UniParc:UPI00015FD704, UniRef:UniRef100_P0C7Y1, UniRef:UniRef50_P0C7Y1, UniRef:UniRef90_P0C7Y1 contig_1 cds 477427 478911 + GCA000560365_00444 nuoL NADH dehydrogenase subunit 5 COG:C, COG:COG1009, EC:1.6.5.9, RefSeq:WP_000948279.1, SO:0001217, UniParc:UPI0000696BB3, UniRef:UniRef100_Q2G0W2, UniRef:UniRef50_Q2G0W2, UniRef:UniRef90_Q2G0W2 contig_1 cds 478924 481629 + GCA000560365_00445 dabA putative inorganic carbon transporter subunit DabA COG:C, COG:COG3002, GO:0005886, GO:0008270, KEGG:K09822, RefSeq:WP_000211543.1, SO:0001217, UniParc:UPI0000696BB4, UniRef:UniRef100_Q2FJI9, UniRef:UniRef50_Q2G0W1, UniRef:UniRef90_Q2G0W1 contig_1 cds 481791 482153 + GCA000560365_00446 mpsC Na+-translocating membrane putative-generating system MpsC domain-containing protein COG:C, COG:COG5609, RefSeq:WP_000831495.1, SO:0001217, UniParc:UPI000005451F, UniRef:UniRef100_Q2G0W0, UniRef:UniRef50_A0A7U7PXA8, UniRef:UniRef90_A0A7U7PXA8 contig_1 cds 482836 483510 + GCA000560365_00447 pgpB Phosphatidic acid phosphatase type 2/haloperoxidase domain-containing protein COG:COG0671, COG:I, RefSeq:WP_000565820.1, SO:0001217, UniParc:UPI00000D9C8B, UniRef:UniRef100_Q2G0V8, UniRef:UniRef50_Q2G0V8, UniRef:UniRef90_Q2G0V8 contig_1 cds 483547 484281 + GCA000560365_00448 yvaK Serine aminopeptidase S33 domain-containing protein COG:COG1647, COG:Q, RefSeq:WP_001220813.1, SO:0001217, UniParc:UPI000005451C, UniRef:UniRef100_Q2G0V7, UniRef:UniRef50_Q2G0V7, UniRef:UniRef90_Q2G0V7 contig_1 cds 484459 484572 + GCA000560365_00449 hypothetical protein RefSeq:WP_000510433.1, SO:0001217, UniParc:UPI000005451B, UniRef:UniRef100_Q2G0V6, UniRef:UniRef50_Q2G0V6, UniRef:UniRef90_Q2G0V6 contig_1 cds 484737 486074 + GCA000560365_00450 yocR Transporter COG:COG0733, COG:R, RefSeq:WP_000828726.1, SO:0001217, UniParc:UPI00004B5B19, UniRef:UniRef100_A0A0H3K718, UniRef:UniRef50_A0A654CN93, UniRef:UniRef90_Q2G0V5 contig_1 cds 486291 487205 + GCA000560365_00451 cysK Tryptophan synthase beta chain-like PALP domain-containing protein COG:COG0031, COG:E, RefSeq:WP_000634105.1, SO:0001217, UniParc:UPI00004B5B1A, UniRef:UniRef100_Q2G0V4, UniRef:UniRef50_Q2G0V4, UniRef:UniRef90_Q2G0V4 contig_1 cds 487189 488331 + GCA000560365_00452 metC bifunctional cystathionine gamma-lyase/homocysteine desulfhydrase COG:COG0626, COG:E, EC:4.4.1.1, EC:4.4.1.2, GO:0019346, GO:0030170, KEGG:K17217, RefSeq:WP_001036663.1, SO:0001217, UniParc:UPI0000054518, UniRef:UniRef100_Q2G0V3, UniRef:UniRef50_Q1M0P5, UniRef:UniRef90_A0A2Y2FJW5 contig_1 cds 488625 489650 + GCA000560365_00453 metN1 Methionine import ATP-binding protein MetN 1 COG:COG1135, COG:E, EC:7.4.2.11, GO:0005524, GO:0005886, GO:0016887, GO:0033232, RefSeq:WP_000569286.1, SO:0001217, UniParc:UPI00004B5B1B, UniRef:UniRef100_Q2G0V2, UniRef:UniRef50_Q2G0V2, UniRef:UniRef90_Q2G0V2 contig_1 cds 489654 490313 + GCA000560365_00454 metP Methionine ABC transporter, permease component COG:COG2011, COG:E, RefSeq:WP_000467994.1, SO:0001217, UniParc:UPI0000054516, UniRef:UniRef100_Q2G0V1, UniRef:UniRef50_S2XCZ2, UniRef:UniRef90_A0A7U7JSM8 contig_1 cds 490350 491192 + GCA000560365_00455 gmpC dipeptide ABC transporter glycylmethionine-binding lipoprotein BlastRules:WP_000825530, COG:COG1464, COG:P, RefSeq:WP_000825521.1, SO:0001217, UniParc:UPI00003DAF82, UniRef:UniRef100_Q2G0V0, UniRef:UniRef50_A0A2K4FBN2, UniRef:UniRef90_A0A2S6D5W8 contig_1 cds 491524 492528 + GCA000560365_00456 aaa autolysin/adhesin Aaa BlastRules:WP_001170264, COG:COG3942, COG:M, EC:3.5.1.28, GO:0000917, GO:0005576, GO:0008745, GO:0008932, GO:0009986, GO:0031640, GO:0042742, GO:0071555, RefSeq:WP_001170264.1, SO:0001217, UniParc:UPI0000052267, UniRef:UniRef100_Q2G0U9, UniRef:UniRef50_Q2G0U9, UniRef:UniRef90_Q2G0U9 contig_1 cds 492713 492982 - GCA000560365_00457 Cytosolic protein RefSeq:WP_001129473.1, SO:0001217, UniParc:UPI0000054512, UniRef:UniRef100_Q2G0U8, UniRef:UniRef50_Q2G0U8, UniRef:UniRef90_Q2G0U8 contig_1 cds 493131 493526 + GCA000560365_00458 mutT NUDIX domain-containing protein COG:COG0494, COG:V, RefSeq:WP_000588527.1, SO:0001217, UniParc:UPI00004B5B1C, UniRef:UniRef100_Q2G0U7, UniRef:UniRef50_A0A2K4FBI9, UniRef:UniRef90_A0AAE8PBQ1 contig_1 cds 493516 494001 + GCA000560365_00459 rimI Acetyltransferase COG:COG0456, COG:J, RefSeq:WP_000183669.1, SO:0001217, UniParc:UPI00004B5B1D, UniRef:UniRef100_Q2G0U6, UniRef:UniRef50_A0A6B1RF14, UniRef:UniRef90_A0A6B1RF14 contig_1 cds 494170 494952 - GCA000560365_00460 YibE/F family protein COG:COG5438, COG:S, RefSeq:WP_000994678.1, SO:0001217, UniParc:UPI000005450F, UniRef:UniRef100_Q2G0U5, UniRef:UniRef50_Q2G0U5, UniRef:UniRef90_Q2G0U5 contig_1 cds 494949 496061 - GCA000560365_00461 YibE/F family protein COG:COG5438, COG:S, RefSeq:WP_000877414.1, SO:0001217, UniParc:UPI0000696BB5, UniRef:UniRef100_A0A1S6A7P3, UniRef:UniRef50_Q2G0U4, UniRef:UniRef90_Q2G0U4 contig_1 cds 496182 497066 - GCA000560365_00462 gltC glutamate biosynthesis transcriptional regulator GltC COG:COG0583, COG:K, GO:0003700, GO:1902065, RefSeq:WP_000403916.1, SO:0001217, UniParc:UPI000005450D, UniRef:UniRef100_Q2G0U3, UniRef:UniRef50_Q2G0U3, UniRef:UniRef90_Q2G0U3 contig_1 cds 497247 501746 + GCA000560365_00463 gltB glutamate synthase large subunit COG:COG0070, COG:E, EC:1.4.1.13, GO:0003824, GO:0006537, GO:0008152, GO:0015930, GO:0016491, RefSeq:WP_000551362.1, SO:0001217, UniParc:UPI0000696BB6, UniRef:UniRef100_Q2G0U2, UniRef:UniRef50_A0A2X2UM59, UniRef:UniRef90_A0A2X2UM59 contig_1 cds 501764 503227 + GCA000560365_00464 gltD Glutamate synthase subunit beta COG:COG0493, COG:ER, RefSeq:WP_000503581.1, SO:0001217, UniParc:UPI0000696BB7, UniRef:UniRef100_A0A5A8VD92, UniRef:UniRef50_B9DLG4, UniRef:UniRef90_A0A0E1X9F2 contig_1 tRNA 503496 503588 + GCA000560365_00465 trnS tRNA-Ser(tga) SO:0000269 contig_1 cds 504059 505486 + GCA000560365_00466 treB PTS trehalose transporter subunit IIBC COG:COG1264, COG:G, EC:2.7.1.201, GO:0008982, GO:0009401, GO:0015574, GO:0015771, GO:0016020, KEGG:K02819, RefSeq:WP_000279374.1, SO:0001217, UniParc:UPI00004B5B20, UniRef:UniRef100_Q2G0U0, UniRef:UniRef50_A0A7S8HGB6, UniRef:UniRef90_A0A2U0IK03 contig_1 cds 505550 507190 + GCA000560365_00467 treC alpha,alpha-phosphotrehalase COG:COG0366, COG:G, EC:3.2.1.93, GO:0005737, GO:0005991, GO:0008788, RefSeq:WP_000031515.1, SO:0001217, UniParc:UPI0000696BB8, UniRef:UniRef100_A0A0E8IZU7, UniRef:UniRef50_A0A1C7FDU5, UniRef:UniRef90_A0AAE2ZTT9 contig_1 cds 507215 507943 + GCA000560365_00468 treR trehalose operon repressor COG:COG2188, COG:K, GO:0003677, GO:0003700, GO:0006355, KEGG:K03486, RefSeq:WP_001118675.1, SO:0001217, UniParc:UPI00000D77D0, UniRef:UniRef100_Q2G0T8, UniRef:UniRef50_A0A291JNW9, UniRef:UniRef90_A0A380DK00 contig_1 ncRNA 508005 508274 + GCA000560365_00469 Bacteria_large_SRP Bacterial large signal recognition particle RNA RFAM:RF01854, SO:0000655 contig_1 ncRNA 508123 508222 + GCA000560365_00470 Bacteria_small_SRP Bacterial small signal recognition particle RNA RFAM:RF00169, SO:0000655 contig_1 cds 508582 509106 + GCA000560365_00471 yhbS N-acetyltransferase domain-containing protein COG:COG3153, COG:R, RefSeq:WP_001167828.1, SO:0001217, UniParc:UPI0000054503, UniRef:UniRef100_Q2G0T6, UniRef:UniRef50_Q2G0T6, UniRef:UniRef90_Q2G0T6 contig_1 cds 509175 510872 + GCA000560365_00472 dnaX DNA polymerase III subunit gamma/tau COG:COG2812, COG:L, EC:2.7.7.7, GO:0003677, GO:0003887, GO:0005524, GO:0006260, GO:0009360, KEGG:K02343, RefSeq:WP_001109047.1, SO:0001217, UniParc:UPI00004B5B23, UniRef:UniRef100_Q2G0T5, UniRef:UniRef50_A0A9X6AJV3, UniRef:UniRef90_A0A3M9FQF8 contig_1 cds 510962 511279 + GCA000560365_00473 ybaB YbaB/EbfC family nucleoid-associated protein COG:COG0718, COG:K, GO:0003677, GO:0005829, GO:0043590, RefSeq:WP_001213992.1, SO:0001217, UniParc:UPI0000054501, UniRef:UniRef100_Q2G0T4, UniRef:UniRef50_Q2G0T4, UniRef:UniRef90_Q2G0T4 contig_1 cds 511286 511882 + GCA000560365_00474 recR recombination mediator RecR COG:COG0353, COG:L, GO:0003677, GO:0006281, GO:0006310, GO:0046872, KEGG:K06187, RefSeq:WP_000559156.1, SO:0001217, UniParc:UPI0000054500, UniRef:UniRef100_Q2G0T3, UniRef:UniRef50_Q6GJJ3, UniRef:UniRef90_Q6GJJ3 contig_1 assembly_gap 513011 516169 . contig_1 rRNA 516260 516374 + GCA000560365_00475 rrf 5S ribosomal RNA GO:0003735, GO:0005840, KEGG:K01985, RFAM:RF00001, SO:0000652 contig_1 rRNA 516587 518138 + GCA000560365_00476 rrs 16S ribosomal RNA GO:0003735, GO:0005840, KEGG:K01977, RFAM:RF00177, SO:0001000 contig_1 rRNA 518505 521427 + GCA000560365_00477 rrl 23S ribosomal RNA GO:0003735, GO:0005840, KEGG:K01980, RFAM:RF02541, SO:0001001 contig_1 rRNA 521500 521614 + GCA000560365_00478 rrf 5S ribosomal RNA GO:0003735, GO:0005840, KEGG:K01985, RFAM:RF00001, SO:0000652 contig_1 cds 522496 523833 + GCA000560365_00479 ldcC Aminotransferase class V-fold PLP-dependent enzyme COG:COG1982, COG:E, RefSeq:WP_000812827.1, SO:0001217, UniParc:UPI0000696BBA, UniRef:UniRef100_A0A0E8JHP5, UniRef:UniRef50_A0A3A5LD70, UniRef:UniRef90_A0A3A5LD70 contig_1 cds 523835 524452 + GCA000560365_00480 tmk dTMP kinase COG:COG0125, COG:F, EC:2.7.4.9, GO:0004798, GO:0005524, GO:0005829, GO:0006227, GO:0006233, GO:0006235, KEGG:K00943, RefSeq:WP_001272126.1, SO:0001217, UniParc:UPI000012E109, UniRef:UniRef100_Q2G230, UniRef:UniRef50_Q2G230, UniRef:UniRef90_Q2G230 contig_1 cds 524480 524809 + GCA000560365_00481 darA Protein from nitrogen regulatory protein P-II (GLNB) family COG:COG3870, COG:T, RefSeq:WP_000781979.1, SO:0001217, UniParc:UPI0000054655, UniRef:UniRef100_Q2G229, UniRef:UniRef50_P37538, UniRef:UniRef90_Q2G229 contig_1 cds 525023 525949 + GCA000560365_00482 holB DNA polymerase III subunit delta' COG:COG0470, COG:L, RefSeq:WP_000344337.1, SO:0001217, UniParc:UPI0000054653, UniRef:UniRef100_Q2G2X1, UniRef:UniRef50_B9DLG1, UniRef:UniRef90_A0A0H3JKW7 contig_1 cds 525950 526753 + GCA000560365_00483 yaaT PSP1 C-terminal domain-containing protein COG:COG1774, COG:T, RefSeq:WP_001134194.1, SO:0001217, UniParc:UPI0000054652, UniRef:UniRef100_Q2G2W9, UniRef:UniRef50_Q2G2W9, UniRef:UniRef90_Q2G2W9 contig_1 cds 526770 527117 + GCA000560365_00484 yabA DNA replication initiation control protein YabA COG:COG4467, COG:L, GO:0006260, RefSeq:WP_000375686.1, SO:0001217, UniParc:UPI00000D9CA0, UniRef:UniRef100_Q5HIJ1, UniRef:UniRef50_Q99WB7, UniRef:UniRef90_Q99WB7 contig_1 cds 527391 528116 + GCA000560365_00485 trmN6 Methyltransferase COG:COG4123, COG:J, RefSeq:WP_000910689.1, SO:0001217, UniParc:UPI0000054650, UniRef:UniRef100_Q2G2X0, UniRef:UniRef50_A0A380G9L7, UniRef:UniRef90_A0A0U1MFR2 contig_1 cds 528109 528357 + GCA000560365_00486 yhbQ UPF0213 protein SACOL0530 COG:COG2827, COG:L, RefSeq:WP_000377064.1, SO:0001217, UniParc:UPI000005464F, UniRef:UniRef100_Q2G2W7, UniRef:UniRef50_Q2G2W7, UniRef:UniRef90_Q2G2W7 contig_1 cds 528359 529198 + GCA000560365_00487 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase COG:COG0313, COG:J, EC:2.1.1.198, GO:0000451, GO:0008649, GO:0008757, RefSeq:WP_000279926.1, SO:0001217, UniParc:UPI000005464E, UniRef:UniRef100_Q2G1S1, UniRef:UniRef50_A0A380GAP2, UniRef:UniRef90_A0A7Z7W1X5 contig_1 cds 529483 531456 + GCA000560365_00488 metG methionine--tRNA ligase COG:COG0143, COG:J, EC:6.1.1.10, GO:0000049, GO:0004825, GO:0005524, GO:0005737, GO:0006431, RefSeq:WP_001051143.1, SO:0001217, UniParc:UPI0000696BBC, UniRef:UniRef100_A0A1S6DKH1, UniRef:UniRef50_P23920, UniRef:UniRef90_Q8NY00 contig_1 cds 531487 532260 + GCA000560365_00489 tatD Metal-dependent DNase COG:COG0084, COG:N, EC:3.1.21.-, KEGG:K03424, RefSeq:WP_000904312.1, SO:0001217, UniParc:UPI0000047408, UniRef:UniRef100_Q2G1S2, UniRef:UniRef50_P37545, UniRef:UniRef90_A0A7U7JSZ7 contig_1 cds 532427 532963 + GCA000560365_00490 rnmV ribonuclease M5 COG:COG1658, COG:J, EC:3.1.26.8, GO:0005737, GO:0006364, GO:0019843, GO:0043822, GO:0046872, KEGG:K05985, RefSeq:WP_000700083.1, SO:0001217, UniParc:UPI0000696BBD, UniRef:UniRef100_A0A5A8VC50, UniRef:UniRef50_Q2G0T1, UniRef:UniRef90_Q2G0T1 contig_1 cds 532974 533867 + GCA000560365_00491 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA COG:COG0030, COG:J, EC:2.1.1.182, GO:0000179, GO:0003723, GO:0005829, GO:0006364, GO:0052908, RefSeq:WP_000886500.1, SO:0001217, UniParc:UPI000012E0C1, UniRef:UniRef100_Q2G0T0, UniRef:UniRef50_Q2G0T0, UniRef:UniRef90_Q2G0T0 contig_1 cds 533967 534230 + GCA000560365_00492 Veg protein COG:COG4466, COG:S, RefSeq:WP_001126664.1, SO:0001217, UniParc:UPI0000054649, UniRef:UniRef100_Q2G0S9, UniRef:UniRef50_Q2G0S9, UniRef:UniRef90_Q2G0S9 contig_1 cds 534540 535388 + GCA000560365_00493 ispE 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase COG:COG1947, COG:I, EC:2.7.1.148, GO:0005524, GO:0016114, GO:0050515, KEGG:K00919, RefSeq:WP_000638870.1, SO:0001217, UniParc:UPI0000054648, UniRef:UniRef100_Q2G0S8, UniRef:UniRef50_B9E8V7, UniRef:UniRef90_Q2G0S8 contig_1 cds 535402 536226 + GCA000560365_00494 purR pur operon repressor COG:COG0503, COG:F, GO:0003677, GO:0006355, GO:0009116, GO:0045892, GO:0045982, KEGG:K09685, RefSeq:WP_001269643.1, SO:0001217, UniParc:UPI0000054647, UniRef:UniRef100_Q2G0S7, UniRef:UniRef50_I0JH29, UniRef:UniRef90_Q5HRQ9 contig_1 cds 536243 536623 + GCA000560365_00495 ridA RidA family protein COG:COG0251, COG:V, RefSeq:WP_000691766.1, SO:0001217, UniParc:UPI0000054646, UniRef:UniRef100_Q2G0S6, UniRef:UniRef50_Q2G0S6, UniRef:UniRef90_Q2G0S6 contig_1 cds 536695 536997 + GCA000560365_00496 spoVG septation regulator SpoVG COG:COG2088, COG:D, GO:0000917, GO:0030435, KEGG:K06412, RefSeq:WP_000868999.1, SO:0001217, UniParc:UPI0000054645, UniRef:UniRef100_Q2G0S5, UniRef:UniRef50_Q2G0S5, UniRef:UniRef90_Q2G0S5 contig_1 cds 537341 538693 + GCA000560365_00497 glmU bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU COG:COG1207, COG:M, EC:2.3.1.157, EC:2.7.7.23, GO:0000287, GO:0000902, GO:0003977, GO:0005737, GO:0006048, GO:0008360, GO:0009245, GO:0009252, GO:0016020, GO:0019134, GO:0071555, RefSeq:WP_001252529.1, SO:0001217, UniParc:UPI00000D9CA3, UniRef:UniRef100_Q2FJE2, UniRef:UniRef50_Q2YVU6, UniRef:UniRef90_Q2YVU6 contig_1 cds 538840 539805 + GCA000560365_00498 prs ribose-phosphate diphosphokinase COG:COG0462, COG:F, EC:2.7.6.1, GO:0000287, GO:0002189, GO:0004749, GO:0005524, GO:0005737, GO:0006015, GO:0006164, GO:0009156, GO:0016301, KEGG:K00948, RefSeq:WP_000933774.1, SO:0001217, UniParc:UPI0000054642, UniRef:UniRef100_P65236, UniRef:UniRef50_Q97E93, UniRef:UniRef90_Q49V09 contig_1 cds 539955 540608 + GCA000560365_00499 rplY 50S ribosomal protein L25/general stress protein Ctc COG:COG1825, COG:J, GO:0003735, GO:0006412, GO:0008097, GO:0022625, KEGG:K02897, RefSeq:WP_000157650.1, SO:0001217, UniParc:UPI00000D768D, UniRef:UniRef100_Q2FJE0, UniRef:UniRef50_Q2FJE0, UniRef:UniRef90_Q2FJE0 contig_1 cds 540919 541491 + GCA000560365_00500 pth aminoacyl-tRNA hydrolase COG:COG0193, COG:J, EC:3.1.1.29, GO:0004045, GO:0005737, GO:0006412, RefSeq:WP_000649791.1, SO:0001217, UniParc:UPI00000013BE, UniRef:UniRef100_Q2G0R9, UniRef:UniRef50_P37470, UniRef:UniRef90_Q2G0R9 contig_1 cds 541491 544997 + GCA000560365_00501 mfd transcription-repair coupling factor COG:COG1197, COG:LK, EC:3.6.4.-, GO:0000716, GO:0003678, GO:0003684, GO:0005524, GO:0005737, GO:0006281, GO:0006355, GO:0016787, KEGG:K03723, RefSeq:WP_000154228.1, SO:0001217, UniParc:UPI000005463F, UniRef:UniRef100_Q2G0R8, UniRef:UniRef50_Q2G0R8, UniRef:UniRef90_Q2G0R8 contig_1 cds 544987 546513 + GCA000560365_00502 spoVB Polysaccharide biosynthesis protein C-terminal domain-containing protein COG:COG5841, COG:D, RefSeq:WP_000680733.1, SO:0001217, UniParc:UPI00004B5B28, UniRef:UniRef100_Q2G0R7, UniRef:UniRef50_A0A380G459, UniRef:UniRef90_Q2G0R7 contig_1 cds 546513 547706 + GCA000560365_00503 yabN Nucleoside triphosphate pyrophosphohydrolase COG:COG3956, COG:R, KEGG:K02499, RefSeq:WP_000951448.1, SO:0001217, UniParc:UPI0000696BBE, UniRef:UniRef100_A0A5A8VF99, UniRef:UniRef50_A0A240AB46, UniRef:UniRef90_A0A3A3A7S3 contig_1 cds 547703 547966 + GCA000560365_00504 hslR RNA-binding S4 domain-containing protein COG:COG1188, COG:J, RefSeq:WP_001234988.1, SO:0001217, UniParc:UPI000005463C, UniRef:UniRef100_Q2G0R5, UniRef:UniRef50_P37557, UniRef:UniRef90_Q2G0R5 contig_1 cds 547984 548376 + GCA000560365_00505 ftsB Septum formation initiator family protein COG:COG2919, COG:D, KEGG:K13052, RefSeq:WP_000792417.1, SO:0001217, UniParc:UPI000005463B, UniRef:UniRef100_Q2G0R4, UniRef:UniRef50_Q2G0R4, UniRef:UniRef90_Q2G0R4 contig_1 cds 548481 548882 + GCA000560365_00506 yabR S1 domain-containing RNA-binding protein COG:COG1098, COG:R, GO:0003676, RefSeq:WP_000021445.1, SO:0001217, UniParc:UPI0000054639, UniRef:UniRef100_Q2G0R3, UniRef:UniRef50_P37560, UniRef:UniRef90_A0AAJ5CU27 contig_1 cds 549062 550357 + GCA000560365_00507 tilS tRNA(Ile)-lysidine synthase COG:COG0037, COG:J, EC:6.3.4.19, GO:0005524, GO:0005737, GO:0006400, GO:0032267, KEGG:K04075, RefSeq:WP_001176715.1, SO:0001217, UniParc:UPI0000054638, UniRef:UniRef100_Q5HIG6, UniRef:UniRef50_Q5HRP5, UniRef:UniRef90_Q99W94 contig_1 cds 550362 550901 + GCA000560365_00508 hpt hypoxanthine phosphoribosyltransferase COG:COG0634, COG:F, EC:2.4.2.8, GO:0000166, GO:0000287, GO:0004422, GO:0005829, GO:0006166, GO:0006178, GO:0032263, GO:0032264, GO:0046100, GO:0052657, RefSeq:WP_000551283.1, SO:0001217, UniParc:UPI00000D7886, UniRef:UniRef100_Q5HIG5, UniRef:UniRef50_Q839B2, UniRef:UniRef90_Q5HRP4 contig_1 cds 551158 553251 + GCA000560365_00509 ftsH ATP-dependent zinc metalloprotease FtsH COG:COG0465, COG:O, GO:0004222, GO:0006508, GO:0016020, GO:0016887, GO:0051301, KEGG:K04083, RefSeq:WP_001167887.1, SO:0001217, UniParc:UPI00004B5B2A, UniRef:UniRef100_A0A0E7WS66, UniRef:UniRef50_P37476, UniRef:UniRef90_A0A0E7WS66 contig_1 cds 553480 554361 + GCA000560365_00510 hslO Hsp33 family molecular chaperone HslO GO:0005737, GO:0006457, GO:0042026, GO:0044183, GO:0051082, KEGG:K04083, RefSeq:WP_000148605.1, SO:0001217, UniParc:UPI0000054634, UniRef:UniRef100_Q2G0Q9, UniRef:UniRef50_P37565, UniRef:UniRef90_Q2G0Q9 contig_1 cds 554540 555472 + GCA000560365_00511 cysK cysteine synthase A COG:COG0031, COG:E, EC:2.5.1.47, GO:0004124, GO:0006535, RefSeq:WP_031808137.1, SO:0001217, UniParc:UPI0004481BBA, UniRef:UniRef100_UPI0004481BBA, UniRef:UniRef50_Q5HRP1, UniRef:UniRef90_Q5HRP1 contig_1 cds 555688 556491 + GCA000560365_00512 folP dihydropteroate synthase COG:COG0294, COG:H, EC:2.5.1.15, GO:0004156, GO:0005829, GO:0009396, GO:0046654, GO:0046656, GO:0046872, KEGG:K00796, RefSeq:WP_000167924.1, SO:0001217, UniParc:UPI00000D9CA7, UniRef:UniRef100_Q8NXZ2, UniRef:UniRef50_P64141, UniRef:UniRef90_P64141 contig_1 cds 556469 556834 + GCA000560365_00513 folB dihydroneopterin aldolase COG:COG1539, COG:H, EC:4.1.2.25, GO:0004150, GO:0005737, GO:0006760, GO:0016853, GO:0046654, GO:0046656, RefSeq:WP_001154302.1, SO:0001217, UniParc:UPI00000D7721, UniRef:UniRef100_Q5HIG0, UniRef:UniRef50_Q5HIG0, UniRef:UniRef90_Q5HIG0 contig_1 cds 556831 557307 + GCA000560365_00514 folK 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase COG:COG0801, COG:H, EC:2.7.6.3, GO:0003848, GO:0009396, RefSeq:WP_000613716.1, SO:0001217, UniParc:UPI0000054630, UniRef:UniRef100_Q2G0Q5, UniRef:UniRef50_Q2G0Q5, UniRef:UniRef90_Q2G0Q5 contig_1 cds 557846 559333 + GCA000560365_00515 lysS lysine--tRNA ligase COG:COG1190, COG:J, EC:6.1.1.6, GO:0000049, GO:0000287, GO:0004824, GO:0005524, GO:0005737, GO:0005829, GO:0006430, GO:0016740, KEGG:K04567, RefSeq:WP_001288202.1, SO:0001217, UniParc:UPI00000CA95E, UniRef:UniRef100_Q2G0Q3, UniRef:UniRef50_P37477, UniRef:UniRef90_Q2G0Q3 contig_1 rRNA 559891 560005 + GCA000560365_00516 rrf 5S ribosomal RNA GO:0003735, GO:0005840, KEGG:K01985, RFAM:RF00001, SO:0000652 contig_1 tRNA 560018 560093 + GCA000560365_00517 trnV tRNA-Val(tac) SO:0000273 contig_1 tRNA 560110 560185 + GCA000560365_00518 trnT tRNA-Thr(tgt) SO:0000270 contig_1 tRNA 560192 560264 + GCA000560365_00519 trnK tRNA-Lys(ttt) SO:0000265 contig_1 tRNA 560298 560372 + GCA000560365_00520 trnG tRNA-Gly(gcc) SO:0000260 contig_1 tRNA 560380 560468 + GCA000560365_00521 trnL tRNA-Leu(taa) SO:0000264 contig_1 tRNA 560474 560550 + GCA000560365_00522 trnR tRNA-Arg(acg) SO:0001036 contig_1 tRNA 560571 560644 + GCA000560365_00523 trnP tRNA-Pro(tgg) SO:0000268 contig_1 tRNA 560668 560743 + GCA000560365_00524 trnA tRNA-Ala(tgc) SO:0000254 contig_1 rRNA 560866 562417 + GCA000560365_00525 rrs 16S ribosomal RNA GO:0003735, GO:0005840, KEGG:K01977, RFAM:RF00177, SO:0001000 contig_1 tRNA 562512 562588 + GCA000560365_00526 trnI tRNA-Ile(gat) SO:0000263 contig_1 rRNA 562756 565678 + GCA000560365_00527 rrl 23S ribosomal RNA GO:0003735, GO:0005840, KEGG:K01980, RFAM:RF02541, SO:0001001 contig_1 rRNA 565751 565865 + GCA000560365_00528 rrf 5S ribosomal RNA GO:0003735, GO:0005840, KEGG:K01985, RFAM:RF00001, SO:0000652 contig_1 cds 566390 567772 - GCA000560365_00529 aRO8 HTH gntR-type domain-containing protein COG:COG1167, COG:KE, KEGG:K00375, RefSeq:WP_000799248.1, SO:0001217, UniParc:UPI00000D783D, UniRef:UniRef100_Q2G0Q2, UniRef:UniRef50_Q2G0Q2, UniRef:UniRef90_Q2G0Q2 contig_1 cds 567876 568763 + GCA000560365_00530 pdxS pyridoxal 5'-phosphate synthase subunit PdxS BlastRules:WP_003247145, COG:COG0214, COG:H, EC:4.3.3.6, GO:0003824, GO:0006520, GO:0008615, GO:0036381, GO:0042823, KEGG:K06215, RefSeq:WP_000034728.1, SO:0001217, UniParc:UPI0000054856, UniRef:UniRef100_Q2G0Q1, UniRef:UniRef50_P37527, UniRef:UniRef90_Q2G0Q1 contig_1 cds 568767 569327 + GCA000560365_00531 pdxT pyridoxal 5'-phosphate synthase glutaminase subunit PdxT COG:COG0311, COG:H, EC:3.5.1.2, EC:4.3.3.6, GO:0004359, GO:0005829, GO:0006543, GO:0008614, GO:0016884, GO:0036381, GO:0042823, GO:1903600, KEGG:K08681, RefSeq:WP_000690439.1, SO:0001217, UniParc:UPI0000054855, UniRef:UniRef100_Q2G0Q0, UniRef:UniRef50_Q2G0Q0, UniRef:UniRef90_Q2G0Q0 contig_1 cds 569535 570749 - GCA000560365_00532 nupC NupC/NupG family nucleoside CNT transporter COG:COG1972, COG:F, KEGG:K11535, RefSeq:WP_000547794.1, SO:0001217, UniParc:UPI0000054854, UniRef:UniRef100_Q2G0P9, UniRef:UniRef50_Q2G0P9, UniRef:UniRef90_Q2G0P9 contig_1 cds 570898 571368 + GCA000560365_00533 ctsR Transcriptional regulator CtsR COG:COG4463, COG:K, GO:0003677, GO:0006355, SO:0001217, UniParc:UPI0001D1697E, UniRef:UniRef100_Q2G0P8, UniRef:UniRef50_Q2G0P8, UniRef:UniRef90_Q2G0P8 contig_1 cds 571387 571953 + GCA000560365_00534 mcsA Protein-arginine kinase activator protein COG:COG3880, COG:O, GO:0003677, GO:0005507, GO:0008270, GO:0046870, GO:0050897, GO:1990169, GO:1990170, RefSeq:WP_000882069.1, SO:0001217, UniParc:UPI00000D7700, UniRef:UniRef100_Q2G0P7, UniRef:UniRef50_Q2G0P7, UniRef:UniRef90_Q2G0P7 contig_1 cds 571940 572950 + GCA000560365_00535 mcsB protein arginine kinase COG:COG3869, COG:O, EC:2.7.14.1, GO:0004111, GO:0004672, GO:0005524, GO:0005615, GO:0046314, SO:0001217, UniParc:UPI0001574414, UniRef:UniRef100_Q2G0P6, UniRef:UniRef50_Q2G0P6, UniRef:UniRef90_Q2G0P6 contig_1 cds 572964 575420 + GCA000560365_00536 clpC ATP-dependent Clp protease ATP-binding subunit ClpC COG:COG0542, COG:O, GO:0005524, GO:0005737, GO:0016887, GO:0034605, RefSeq:WP_000897132.1, SO:0001217, UniParc:UPI000005484F, UniRef:UniRef100_Q2G0P5, UniRef:UniRef50_Q2G0P5, UniRef:UniRef90_Q2G0P5 contig_1 cds 575905 577269 + GCA000560365_00537 radA DNA repair protein RadA COG:COG1066, COG:L, GO:0003684, GO:0005524, GO:0006281, RefSeq:WP_001085220.1, SO:0001217, UniParc:UPI00004B5B2C, UniRef:UniRef100_A0A0D3Q4U0, UniRef:UniRef50_A5GDK5, UniRef:UniRef90_A0A380G4B0 contig_1 cds 577294 578367 + GCA000560365_00538 TRAM domain-containing protein COG:COG4956, COG:R, RefSeq:WP_001028376.1, SO:0001217, UniParc:UPI00000D7788, UniRef:UniRef100_Q2G242, UniRef:UniRef50_A0A9X6AJN5, UniRef:UniRef90_Q2G242 contig_1 cds 578924 580378 + GCA000560365_00539 gltX glutamate--tRNA ligase COG:COG0008, COG:J, EC:6.1.1.17, GO:0000049, GO:0000166, GO:0004818, GO:0005524, GO:0005829, GO:0006424, GO:0008270, RefSeq:WP_001283792.1, SO:0001217, UniParc:UPI000002E8EE, UniRef:UniRef100_Q2G241, UniRef:UniRef50_Q97NG1, UniRef:UniRef90_Q2G241 contig_1 cds 580768 581448 + GCA000560365_00540 cysE serine O-acetyltransferase COG:COG1045, COG:E, EC:2.3.1.30, GO:0005737, GO:0006535, GO:0009001, RefSeq:WP_001547606.1, SO:0001217, UniParc:UPI000175C520, UniRef:UniRef100_Q6GJE0, UniRef:UniRef50_A8F961, UniRef:UniRef90_Q5HRM4 contig_1 cds 581432 582832 + GCA000560365_00541 cysS cysteine--tRNA ligase COG:COG0215, COG:J, EC:6.1.1.16, GO:0004817, GO:0005524, GO:0005737, GO:0005829, GO:0006423, GO:0008270, KEGG:K01883, RefSeq:WP_000631963.1, SO:0001217, UniParc:UPI00004B5B2E, UniRef:UniRef100_Q2G2M6, UniRef:UniRef50_Q06752, UniRef:UniRef90_Q2G2M6 contig_1 cds 582825 583229 + GCA000560365_00542 mrnC Mini-ribonuclease 3 COG:COG1939, COG:J, EC:3.1.26.-, GO:0004525, GO:0005737, GO:0006364, GO:0019843, RefSeq:WP_000370182.1, SO:0001217, UniParc:UPI00000D770F, UniRef:UniRef100_Q2G2M4, UniRef:UniRef50_Q2G2M4, UniRef:UniRef90_Q2G2M4 contig_1 cds 583237 583983 + GCA000560365_00543 rlmB 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB COG:COG0566, COG:J, EC:2.1.1.-, GO:0003723, GO:0005829, GO:0006396, GO:0008173, GO:0032259, RefSeq:WP_000390328.1, SO:0001217, UniParc:UPI00000BBCB5, UniRef:UniRef100_Q5HIE3, UniRef:UniRef50_Q49V41, UniRef:UniRef90_Q99W72 contig_1 cds 583983 584507 + GCA000560365_00544 rae1 NYN domain-containing protein COG:COG3688, COG:J, KEGG:K06962, RefSeq:WP_000664738.1, SO:0001217, UniParc:UPI0000054846, UniRef:UniRef100_Q2G2M5, UniRef:UniRef50_Q49V42, UniRef:UniRef90_Q2G2M5 contig_1 cds 584588 585157 + GCA000560365_00545 rpoE RNA polymerase sigma factor SigS COG:COG1595, COG:K, RefSeq:WP_000872873.1, SO:0001217, UniParc:UPI00004B5B2F, UniRef:UniRef100_Q2G0P4, UniRef:UniRef50_Q2G0P4, UniRef:UniRef90_Q2G0P4 contig_1 cds 585471 585653 + GCA000560365_00546 secE preprotein translocase subunit SecE COG:COG0690, COG:U, GO:0005886, GO:0006605, GO:0008320, GO:0009306, GO:0015450, GO:0043952, GO:0065002, RefSeq:WP_001074474.1, SO:0001217, UniParc:UPI00000B7A5E, UniRef:UniRef100_Q5HIE0, UniRef:UniRef50_P0A0I4, UniRef:UniRef90_P0A0I4 contig_1 cds 585666 586214 + GCA000560365_00547 nusG transcription termination/antitermination protein NusG COG:COG0250, COG:K, GO:0005829, GO:0006353, GO:0031564, GO:0032784, GO:0140673, RefSeq:WP_001288302.1, SO:0001217, UniParc:UPI0000054843, UniRef:UniRef100_Q2G0P2, UniRef:UniRef50_Q2G0P2, UniRef:UniRef90_Q2G0P2 contig_1 cds 586395 586817 + GCA000560365_00548 rplK 50S ribosomal protein L11 COG:COG0080, COG:J, GO:0003735, GO:0005840, GO:0006412, GO:0022625, GO:0070180, KEGG:K02867, RefSeq:WP_031808138.1, SO:0001217, UniParc:UPI0004521376, UniRef:UniRef100_UPI0004521376, UniRef:UniRef50_P0A0F4, UniRef:UniRef90_P0A0F4 contig_1 cds 587025 587717 + GCA000560365_00549 rplA 50S ribosomal protein L1 COG:COG0081, COG:J, GO:0000049, GO:0003723, GO:0003735, GO:0006412, GO:0006417, GO:0015934, GO:0019843, KEGG:K02863, RefSeq:WP_001074619.1, SO:0001217, UniParc:UPI0000054841, UniRef:UniRef100_Q2G0P0, UniRef:UniRef50_Q5M2K0, UniRef:UniRef90_Q2G0P0 contig_1 ncRNA-region 587805 587951 + Ribosomal protein L10 leader RFAM:RF00557, SO:0000140 contig_1 cds 587989 588489 + GCA000560365_00550 rplJ 50S ribosomal protein L10 COG:COG0244, COG:J, GO:0003735, GO:0006412, GO:0015934, GO:0070180, KEGG:K02864, RefSeq:WP_001273085.1, SO:0001217, UniParc:UPI0000054840, UniRef:UniRef100_Q2G0N9, UniRef:UniRef50_P66042, UniRef:UniRef90_Q2G0N9 contig_1 cds 588532 588900 + GCA000560365_00551 rplL 50S ribosomal protein L7/L12 COG:COG0222, COG:J, GO:0003729, GO:0003735, GO:0005840, GO:0006412, GO:0022625, RefSeq:WP_001273586.1, SO:0001217, UniParc:UPI0000052289, UniRef:UniRef100_P48860, UniRef:UniRef50_P48860, UniRef:UniRef90_P48860 contig_1 cds 589075 589683 + GCA000560365_00552 rsmC Methyltransferase small domain-containing protein COG:COG2813, COG:J, RefSeq:WP_000020304.1, SO:0001217, UniParc:UPI000005483D, UniRef:UniRef100_Q2G0N7, UniRef:UniRef50_A0A556PLC6, UniRef:UniRef90_Q2G0N7 contig_1 cds 589898 593449 + GCA000560365_00553 rpoB DNA-directed RNA polymerase subunit beta COG:COG0085, COG:K, EC:2.7.7.6, GO:0000428, GO:0001054, GO:0001055, GO:0001056, GO:0001057, GO:0001058, GO:0001066, GO:0003677, GO:0003899, GO:0006351, GO:0032549, KEGG:K03043, RefSeq:WP_000918667.1, SO:0001217, UniParc:UPI00000D771C, UniRef:UniRef100_P47768, UniRef:UniRef50_P47768, UniRef:UniRef90_P47768 contig_1 cds 593586 597209 + GCA000560365_00554 rpoC DNA-directed RNA polymerase subunit beta' COG:COG0086, COG:K, EC:2.7.7.6, GO:0000287, GO:0000428, GO:0001054, GO:0001055, GO:0001056, GO:0001057, GO:0001058, GO:0001066, GO:0003677, GO:0003899, GO:0006351, GO:0008270, KEGG:K03046, SO:0001217, UniParc:UPI00015D7B2C, UniRef:UniRef100_Q2FJ97, UniRef:UniRef50_P37871, UniRef:UniRef90_Q2G0N5 contig_1 cds 597346 597600 + GCA000560365_00555 rpl7Ae RNA-binding protein MW0499 COG:COG1358, COG:J, GO:0003723, KEGG:K07590, RefSeq:WP_000031892.1, SO:0001217, UniParc:UPI00001353D9, UniRef:UniRef100_P0A0G6, UniRef:UniRef50_P0A0G6, UniRef:UniRef90_P0A0G6 contig_1 cds 597698 598111 + GCA000560365_00556 rpsL 30S ribosomal protein S12 COG:COG0048, COG:J, GO:0000049, GO:0003735, GO:0006412, GO:0015935, GO:0019843, KEGG:K02950, RefSeq:WP_001142337.1, SO:0001217, UniParc:UPI0000048026, UniRef:UniRef100_P0A0H0, UniRef:UniRef50_P0A0H0, UniRef:UniRef90_P0A0H0 contig_1 cds 598177 598647 + GCA000560365_00557 rpsG 30S ribosomal protein S7 COG:COG0049, COG:J, GO:0000049, GO:0003735, GO:0006412, GO:0015935, GO:0019843, KEGG:K02992, RefSeq:WP_001137495.1, SO:0001217, UniParc:UPI000004801A, UniRef:UniRef100_P48940, UniRef:UniRef50_P02359, UniRef:UniRef90_P48940 contig_1 cds 598770 600851 + GCA000560365_00558 fusA elongation factor G FusA COG:COG0480, COG:J, GO:0003746, GO:0003924, GO:0005525, GO:0005737, GO:0006414, GO:0032790, KEGG:K02355, RefSeq:WP_000090315.1, SO:0001217, UniParc:UPI0000052287, UniRef:UniRef100_Q2G0N1, UniRef:UniRef50_Q9SI75, UniRef:UniRef90_Q2G0N1 contig_1 cds 601068 602252 + GCA000560365_00559 tuf elongation factor Tu COG:COG0050, COG:J, GO:0003746, GO:0003924, GO:0005525, GO:0005829, GO:0006414, RefSeq:WP_001040568.1, SO:0001217, UniParc:UPI0000054837, UniRef:UniRef100_Q2G0N0, UniRef:UniRef50_Q74JU6, UniRef:UniRef90_Q2G0N0 contig_1 cds 602534 603709 - GCA000560365_00560 abgB Peptidase COG:COG1473, COG:R, RefSeq:WP_000887915.1, SO:0001217, UniParc:UPI00004B5B33, UniRef:UniRef100_Q2G0M9, UniRef:UniRef50_A0A2I7Y808, UniRef:UniRef90_A0A2I7Y808 contig_1 cds 603880 605067 + GCA000560365_00561 bioF glycine C-acetyltransferase COG:COG0156, COG:H, EC:2.3.1.-, EC:2.3.1.29, GO:0008890, GO:0009058, GO:0016740, GO:0030170, RefSeq:WP_000250824.1, SO:0001217, UniParc:UPI00004B5B34, UniRef:UniRef100_Q5HIC5, UniRef:UniRef50_Q73KM3, UniRef:UniRef90_P60121 contig_1 cds 605333 606211 + GCA000560365_00562 hchA glyoxalase III HchA COG:COG0693, COG:V, EC:3.1.2.-, EC:3.5.1.-, EC:3.5.1.124, GO:0005737, GO:0006281, GO:0016790, GO:0019172, GO:0019243, GO:0030091, GO:0036524, KEGG:K05523, RefSeq:WP_000076404.1, SO:0001217, UniParc:UPI0000054833, UniRef:UniRef100_Q2G0M7, UniRef:UniRef50_Q2G0M7, UniRef:UniRef90_Q2G0M7 contig_1 cds 606371 608008 + GCA000560365_00563 araB ribulokinase COG:COG1069, COG:G, EC:2.7.1.16, GO:0005524, GO:0005737, GO:0008741, GO:0019150, GO:0019569, RefSeq:WP_000122340.1, SO:0001217, UniParc:UPI00004B5B35, UniRef:UniRef100_Q2G0M6, UniRef:UniRef50_Q2G0M6, UniRef:UniRef90_Q2G0M6 contig_1 cds 608222 609187 + GCA000560365_00564 wcaG putative epimerase/dehydratase SAR0558 COG:COG0451, COG:M, GO:0006567, GO:0008743, RefSeq:WP_000723301.1, SO:0001217, UniParc:UPI0000054831, UniRef:UniRef100_Q2G0M5, UniRef:UniRef50_Q2G0M5, UniRef:UniRef90_Q2G0M5 contig_1 cds 609522 610598 + GCA000560365_00565 ilvE branched-chain amino acid aminotransferase COG:COG0115, COG:EH, EC:2.6.1.42, GO:0004084, GO:0009081, GO:0009097, GO:0009098, GO:0009099, GO:0052655, GO:0052656, KEGG:K00826, RefSeq:WP_000076036.1, SO:0001217, UniParc:UPI0000054830, UniRef:UniRef100_Q5HIC1, UniRef:UniRef50_Q8CQ78, UniRef:UniRef90_Q5HIC1 contig_1 cds 610848 611531 + GCA000560365_00566 gph HAD family hydrolase COG:C, COG:COG0546, RefSeq:WP_000454784.1, SO:0001217, UniParc:UPI00000D9CAE, UniRef:UniRef100_Q2G0M2, UniRef:UniRef50_A0A2Y2GZN0, UniRef:UniRef90_A0A2Y2GZN0 contig_1 cds 611647 612309 - GCA000560365_00567 dck Deoxyadenosine/deoxycytidine kinase COG:COG1428, COG:F, RefSeq:WP_001067262.1, SO:0001217, UniParc:UPI000005482D, UniRef:UniRef100_Q2G0M1, UniRef:UniRef50_P37529, UniRef:UniRef90_A0A0U1MET2 contig_1 cds 612302 612919 - GCA000560365_00568 dck Deoxynucleoside kinase domain-containing protein COG:COG1428, COG:F, EC:2.7.1.113, KEGG:K15518, RefSeq:WP_001039519.1, SO:0001217, UniParc:UPI000005482C, UniRef:UniRef100_Q2G0M0, UniRef:UniRef50_A0A380GAH5, UniRef:UniRef90_Q2G0M0 contig_1 cds 612986 613456 + GCA000560365_00569 tadA tRNA adenosine(34) deaminase TadA COG:COG0590, COG:J, EC:3.5.4.33, GO:0002100, GO:0008251, GO:0008270, GO:0052717, KEGG:K11991, RefSeq:WP_000180281.1, SO:0001217, UniParc:UPI000005482B, UniRef:UniRef100_Q99W51, UniRef:UniRef50_Q99W51, UniRef:UniRef90_Q99W51 contig_1 cds 613603 614472 + GCA000560365_00570 cof Cof-type HAD-IIB family hydrolase COG:COG0561, COG:HR, EC:3.1.3.104, KEGG:K21064, RefSeq:WP_000593367.1, SO:0001217, UniParc:UPI000005482A, UniRef:UniRef100_Q2G0L8, UniRef:UniRef50_Q2G0L8, UniRef:UniRef90_Q2G0L8 contig_1 cds 614493 615059 + GCA000560365_00571 azo1 FMN-dependent NADPH-azoreductase COG:C, COG:COG0431, EC:1.7.-.-, GO:0005829, GO:0010181, GO:0016491, RefSeq:WP_000677261.1, SO:0001217, UniParc:UPI0000054828, UniRef:UniRef100_Q2G0L7, UniRef:UniRef50_Q2G0L7, UniRef:UniRef90_Q2G0L7 contig_1 cds 615490 618333 + GCA000560365_00572 sdrC Ser-Asp rich fibrinogen-binding bone sialoprotein-binding protein GO:0005576, GO:0007155, RefSeq:WP_031808139.1, SO:0001217, UniParc:UPI00044808D1, UniRef:UniRef100_UPI00044808D1, UniRef:UniRef50_O86487, UniRef:UniRef90_O86487, VFDB:VFC0001, VFDB:VFG001279 contig_1 cds 618700 622845 + GCA000560365_00573 sdrD MSCRAMM family adhesin SdrD BlastRules:WP_000934401, COG:COG4932, COG:M, GO:0005576, GO:0007155, RefSeq:WP_000934424.1, SO:0001217, UniParc:UPI00004B5B37, UniRef:UniRef100_Q2FJ78, UniRef:UniRef50_Q2G0L4, UniRef:UniRef90_Q2G0L4 contig_1 cds 623239 626703 + GCA000560365_00574 sdrE Ser-Asp rich fibrinogen-binding bone sialoprotein-binding protein GO:0005576, GO:0007155, RefSeq:WP_000610319.1, SO:0001217, UniParc:UPI0000696BC7, UniRef:UniRef100_Q2FJ77, UniRef:UniRef50_Q14U76, UniRef:UniRef90_O86489, VFDB:VFC0001, VFDB:VFG001281 contig_1 cds 626822 628294 + GCA000560365_00575 rfaB Glycosyltransferase COG:COG0438, COG:M, RefSeq:WP_001106738.1, SO:0001217, UniParc:UPI0000054825, UniRef:UniRef100_Q2G0L3, UniRef:UniRef50_A0AAE2ZQD7, UniRef:UniRef90_A0AAE2ZQD7 contig_1 cds 628418 629908 - GCA000560365_00576 rfaB Glycosyl transferase family 1 domain-containing protein COG:COG0438, COG:M, RefSeq:WP_001106113.1, SO:0001217, UniParc:UPI0000054824, UniRef:UniRef100_Q2G0L2, UniRef:UniRef50_Q2G0L2, UniRef:UniRef90_Q2G0L2 contig_1 cds 630190 631068 - GCA000560365_00577 folE2 GTP cyclohydrolase FolE2 COG:COG1469, COG:H, EC:3.5.4.16, GO:0003933, GO:0003934, GO:0046654, KEGG:K09007, RefSeq:WP_000134232.1, SO:0001217, UniParc:UPI0000054823, UniRef:UniRef100_Q2G0L1, UniRef:UniRef50_Q2G0L1, UniRef:UniRef90_Q2G0L1 contig_1 cds 631081 631746 - GCA000560365_00578 bshB2 bacillithiol biosynthesis deacetylase BshB2 COG:COG2120, COG:G, EC:3.5.1.-, GO:0019213, KEGG:K22135, RefSeq:WP_000129063.1, SO:0001217, UniParc:UPI00004B5B38, UniRef:UniRef100_Q2G0L0, UniRef:UniRef50_A0A8J4SJ37, UniRef:UniRef90_Q2G0L0 contig_1 cds 631760 632122 - GCA000560365_00579 DUF1806 domain-containing protein RefSeq:WP_001547756.1, SO:0001217, UniParc:UPI00004B5B39, UniRef:UniRef100_Q2G0K9, UniRef:UniRef50_A0A7U7JT15, UniRef:UniRef90_A0A7U7JT15 contig_1 cds 632398 633156 + GCA000560365_00580 nagB glucosamine-6-phosphate deaminase COG:COG0363, COG:G, EC:3.5.99.6, GO:0004342, GO:0005737, GO:0005975, GO:0006043, GO:0006044, GO:0006046, GO:0019262, GO:0042802, RefSeq:WP_000866415.1, SO:0001217, UniParc:UPI0000054820, UniRef:UniRef100_Q2G0K8, UniRef:UniRef50_Q2G0K8, UniRef:UniRef90_Q2G0K8 contig_1 cds 633233 633865 + GCA000560365_00581 3-hexulose-6-phosphate synthase EC:4.1.2.43, GO:0004590, GO:0006207, GO:0006730, GO:0019647, GO:0019854, GO:0033982, GO:0043801, RefSeq:WP_000422858.1, SO:0001217, UniParc:UPI0000696BC8, UniRef:UniRef100_Q2FJ70, UniRef:UniRef50_P42405, UniRef:UniRef90_Q2FJ70 contig_1 cds 633867 634415 + GCA000560365_00582 gutQ 6-phospho-3-hexuloisomerase (PHI) COG:COG0794, COG:GM, EC:5.3.1.27, KEGG:K08094, RefSeq:WP_001051594.1, SO:0001217, UniParc:UPI000005481D, UniRef:UniRef100_Q2G0K6, UniRef:UniRef50_A0A380G9B8, UniRef:UniRef90_A0A0U1MEX0 contig_1 cds 634528 635175 + GCA000560365_00583 gph HAD family hydrolase COG:C, COG:COG0546, RefSeq:WP_000667097.1, SO:0001217, UniParc:UPI0000696BCA, UniRef:UniRef100_Q2G0K5, UniRef:UniRef50_A0A3M9EEU9, UniRef:UniRef90_A0A3M9EEU9 contig_1 cds 635677 637077 + GCA000560365_00584 proP Putative proline/betaine transporter COG:COG2814, COG:G, GO:0005886, GO:0015293, KEGG:K03762, RefSeq:WP_000347061.1, SO:0001217, UniParc:UPI00000CAA1A, UniRef:UniRef100_Q5HIA2, UniRef:UniRef50_Q4L3Q4, UniRef:UniRef90_Q5HIA2 contig_1 cds 637621 638997 + GCA000560365_00585 vraA Putative long chain fatty acid-CoA ligase VraA COG:COG0318, COG:I, EC:6.2.1.-, GO:0006631, GO:0031956, RefSeq:WP_001100835.1, SO:0001217, UniParc:UPI00000D765B, UniRef:UniRef100_Q5HIA1, UniRef:UniRef50_Q5HIA1, UniRef:UniRef90_Q6GJ94 contig_1 cds 638999 640138 + GCA000560365_00586 vraB Putative acetyl-CoA C-acetyltransferase VraB COG:COG0183, COG:I, EC:2.3.1.-, GO:0003988, GO:0006635, GO:0010124, RefSeq:WP_001070676.1, SO:0001217, UniParc:UPI00000D7809, UniRef:UniRef100_Q7A2W9, UniRef:UniRef50_Q7A2W9, UniRef:UniRef90_Q7A2W9 contig_1 cds 640113 640478 + GCA000560365_00587 vraC Protein VraC RefSeq:WP_001165058.1, SO:0001217, UniParc:UPI0000054818, UniRef:UniRef100_Q5HI99, UniRef:UniRef50_Q5HI99, UniRef:UniRef90_Q5HI99 contig_1 cds 640481 640750 + GCA000560365_00588 Phage protein RefSeq:WP_000671099.1, SO:0001217, UniParc:UPI00000D7672, UniRef:UniRef100_X5EG78, UniRef:UniRef50_A0A7U7JSW5, UniRef:UniRef90_X5EG78 contig_1 cds 640951 641118 - GCA000560365_00589 vraX Protein VraX RefSeq:WP_000587958.1, SO:0001217, UniParc:UPI0000054816, UniRef:UniRef100_Q5HI97, UniRef:UniRef50_Q5HRG9, UniRef:UniRef90_Q5HI97 contig_1 cds 641625 642455 - GCA000560365_00590 pdxK Putative pyridoxine kinase COG:COG0351, COG:H, EC:2.7.1.35, GO:0005524, GO:0005829, GO:0008478, GO:0008902, GO:0008972, GO:0009228, GO:0046872, RefSeq:WP_001185462.1, SO:0001217, UniParc:UPI0000054815, UniRef:UniRef100_Q5HI96, UniRef:UniRef50_Q8CTQ7, UniRef:UniRef90_Q5HI96 contig_1 cds 642639 643295 + GCA000560365_00591 ung uracil-DNA glycosylase COG:COG0692, COG:L, EC:3.2.2.27, GO:0004844, GO:0005737, GO:0006284, GO:0097510, KEGG:K03648, RefSeq:WP_000455256.1, SO:0001217, UniParc:UPI0000054813, UniRef:UniRef100_Q2G0J7, UniRef:UniRef50_Q2G0J7, UniRef:UniRef90_Q2G0J7 contig_1 cds 643296 643676 + GCA000560365_00592 ywdI YwdI family protein RefSeq:WP_000934517.1, SO:0001217, UniParc:UPI0000054812, UniRef:UniRef100_Q2G0J6, UniRef:UniRef50_Q2G0J6, UniRef:UniRef90_Q2G0J6 contig_1 cds 643809 644177 + GCA000560365_00593 ygdD UPF0382 membrane protein SACOL0629 COG:COG2363, COG:S, GO:0005886, RefSeq:WP_000765183.1, SO:0001217, UniParc:UPI0000054811, UniRef:UniRef100_Q2G0J5, UniRef:UniRef50_Q5HRG3, UniRef:UniRef90_Q2G0J5 contig_1 cds 644298 645782 + GCA000560365_00594 potE APC family permease COG:COG0531, COG:E, RefSeq:WP_000412514.1, SO:0001217, UniParc:UPI00000CAC23, UniRef:UniRef100_Q2G0J4, UniRef:UniRef50_Q2G0J4, UniRef:UniRef90_Q2G0J4 contig_1 cds 645924 646376 - GCA000560365_00595 yjjB Threonine/Serine exporter ThrE domain-containing protein COG:C, COG:COG3610, RefSeq:WP_000498572.1, SO:0001217, UniParc:UPI000005480F, UniRef:UniRef100_Q2G0J3, UniRef:UniRef50_Q2G0J3, UniRef:UniRef90_Q2G0J3 contig_1 cds 646389 647153 - GCA000560365_00596 yjjP Threonine/serine exporter-like N-terminal domain-containing protein COG:C, COG:COG2966, RefSeq:WP_000354088.1, SO:0001217, UniParc:UPI0000052269, UniRef:UniRef100_Q2G0J2, UniRef:UniRef50_Q2G0J2, UniRef:UniRef90_Q2G0J2 contig_1 ncRNA 647394 647532 + GCA000560365_00597 rsaA RNA Staph. aureus A RFAM:RF01816, SO:0000655 contig_1 cds 647702 648454 - GCA000560365_00598 hemQ hydrogen peroxide-dependent heme synthase COG:COG3253, COG:HP, EC:1.3.98.5, GO:0004601, GO:0006783, GO:0006785, GO:0020037, GO:0046872, RefSeq:WP_000075703.1, SO:0001217, UniParc:UPI000005480E, UniRef:UniRef100_Q2G0J1, UniRef:UniRef50_Q8Y5F1, UniRef:UniRef90_Q2G0J1 contig_1 cds 648622 649608 + GCA000560365_00599 pta phosphate acetyltransferase COG:C, COG:COG0280, EC:2.3.1.8, GO:0005737, GO:0006085, GO:0006086, GO:0008959, RefSeq:WP_000774281.1, SO:0001217, UniParc:UPI000005480C, UniRef:UniRef100_Q5HI88, UniRef:UniRef50_P39646, UniRef:UniRef90_Q6GJ80 contig_1 cds 649611 650447 + GCA000560365_00600 lipL Octanoyl-[GcvH]:protein N-octanoyltransferase COG:COG0095, COG:H, EC:2.3.1.204, GO:0009107, GO:0033819, KEGG:K16869, RefSeq:WP_000362357.1, SO:0001217, UniParc:UPI000005480B, UniRef:UniRef100_Q2G0I9, UniRef:UniRef50_Q2G0I9, UniRef:UniRef90_Q2G0I9 contig_1 cds 651034 651954 + GCA000560365_00601 mvk mevalonate kinase COG:COG1577, COG:I, EC:2.7.1.36, GO:0004496, GO:0005524, GO:0005737, GO:0016126, GO:0019287, KEGG:K00869, RefSeq:WP_000197034.1, SO:0001217, UniParc:UPI000005480A, UniRef:UniRef100_Q2G0I8, UniRef:UniRef50_A0A2K4AEE5, UniRef:UniRef90_A0A2K4AEE5 contig_1 cds 651959 652942 + GCA000560365_00602 mvaD diphosphomevalonate decarboxylase COG:COG3407, COG:I, EC:4.1.1.33, GO:0004163, GO:0005829, GO:0019287, KEGG:K01597, RefSeq:WP_000597335.1, SO:0001217, UniParc:UPI00000D9CBE, UniRef:UniRef100_Q2G0I7, UniRef:UniRef50_Q9FD68, UniRef:UniRef90_Q9FD84 contig_1 cds 652955 654031 + GCA000560365_00603 eRG12 phosphomevalonate kinase COG:COG1577, COG:I, EC:2.7.4.2, GO:0004631, GO:0016126, GO:0019287, KEGG:K00938, RefSeq:WP_000616888.1, SO:0001217, UniParc:UPI0000696BCB, UniRef:UniRef100_A0A0E8GDF5, UniRef:UniRef50_B9DKS0, UniRef:UniRef90_A0A077VHR5 contig_1 cds 654208 654549 + GCA000560365_00604 UPF0741 protein USA300HOU_0586 RefSeq:WP_000798968.1, SO:0001217, UniParc:UPI0000696BCC, UniRef:UniRef100_Q2FJ50, UniRef:UniRef50_Q2G0I5, UniRef:UniRef90_Q2G0I5 contig_1 cds 654601 655923 - GCA000560365_00605 merA hypothiocyanous acid reductase MerA COG:C, COG:COG1249, GO:0016668, GO:0050660, KEGG:K21739, RefSeq:WP_000860581.1, SO:0001217, UniParc:UPI00004B5B3D, UniRef:UniRef100_A0A266CGC0, UniRef:UniRef50_A0A266CGC0, UniRef:UniRef90_A0A266CGC0 contig_1 cds 655910 656350 - GCA000560365_00606 hypR redox-sensitive transcriptional regulator HypR COG:COG1959, COG:K, RefSeq:WP_001047239.1, SO:0001217, UniParc:UPI00004B5B3E, UniRef:UniRef100_X5DT38, UniRef:UniRef50_Q2G0I3, UniRef:UniRef90_Q2G0I3 contig_1 cds 656975 658384 + GCA000560365_00607 LXG domain-containing protein RefSeq:WP_000020800.1, SO:0001217, UniParc:UPI00004B5B3F, UniRef:UniRef100_A0A0H2WVY8, UniRef:UniRef50_Q2G0I1, UniRef:UniRef90_Q2G0I1 contig_1 cds 658388 659014 + GCA000560365_00608 DUF443 domain-containing protein RefSeq:WP_000898356.1, SO:0001217, UniParc:UPI00004B5B40, UniRef:UniRef100_A0A0E7DYF4, UniRef:UniRef50_Q2G0I0, UniRef:UniRef90_Q2G0I0 contig_1 cds 659140 659781 + GCA000560365_00609 DUF443 domain-containing protein RefSeq:WP_000404342.1, SO:0001217, UniParc:UPI00004B5B41, UniRef:UniRef100_Q2G0H9, UniRef:UniRef50_Q2G0H7, UniRef:UniRef90_Q2G0H9 contig_1 cds 659869 660486 + GCA000560365_00610 DUF443 domain-containing protein RefSeq:WP_000882165.1, SO:0001217, UniParc:UPI00004B5B42, UniRef:UniRef100_Q2G0H8, UniRef:UniRef50_Q2G0H8, UniRef:UniRef90_Q2G0H8 contig_1 cds 660561 661190 + GCA000560365_00611 DUF443 domain-containing protein RefSeq:WP_000882146.1, SO:0001217, UniParc:UPI00000D9CC6, UniRef:UniRef100_Q2G0H7, UniRef:UniRef50_Q2G0H7, UniRef:UniRef90_Q2G0H7 contig_1 cds 661386 662006 + GCA000560365_00612 DUF443 domain-containing protein RefSeq:WP_000882085.1, SO:0001217, UniParc:UPI00004B5B43, UniRef:UniRef100_A0A0D6G608, UniRef:UniRef50_Q2G0H7, UniRef:UniRef90_Q2G0H5 contig_1 cds 662146 662778 + GCA000560365_00613 DUF443 domain-containing protein RefSeq:WP_000882112.1, SO:0001217, UniParc:UPI0001698548, UniRef:UniRef100_A0A2C9TX59, UniRef:UniRef50_Q2G0H4, UniRef:UniRef90_Q2G0H4 contig_1 cds 662825 662995 + GCA000560365_00614 DUF443 domain-containing protein SO:0001217, UniParc:UPI000197A88F, UniRef:UniRef100_Q2G0H3, UniRef:UniRef50_Q2G0H7, UniRef:UniRef90_Q2G0H3 contig_1 cds 663907 664536 + GCA000560365_00615 DUF443 domain-containing protein RefSeq:WP_000923036.1, SO:0001217, UniParc:UPI00000547F9, UniRef:UniRef100_Q2G0H1, UniRef:UniRef50_Q2G0H7, UniRef:UniRef90_Q2G0H1 contig_1 cds 664660 665301 + GCA000560365_00616 DUF443 domain-containing protein RefSeq:WP_000882182.1, SO:0001217, UniParc:UPI00000D9CCA, UniRef:UniRef100_Q2G0H0, UniRef:UniRef50_Q2G0H0, UniRef:UniRef90_Q2G0H0 contig_1 cds 665338 665973 + GCA000560365_00617 DUF443 domain-containing protein RefSeq:WP_000882123.1, SO:0001217, UniParc:UPI00003B1477, UniRef:UniRef100_Q2G0G9, UniRef:UniRef50_Q2G0H7, UniRef:UniRef90_Q2G0G9 contig_1 cds 665939 666184 + GCA000560365_00618 Phage protein SO:0001217, UniParc:UPI00015FD74D, UniRef:UniRef100_A0A380EEB9, UniRef:UniRef50_A0A7I8NLS0, UniRef:UniRef90_A0A7I8NLS0 contig_1 cds 666208 666834 + GCA000560365_00619 DUF443 domain-containing protein RefSeq:WP_000923044.1, SO:0001217, UniParc:UPI00000547F4, UniRef:UniRef100_Q2G0G7, UniRef:UniRef50_Q2G0H7, UniRef:UniRef90_Q2G0G7 contig_1 cds 667104 668042 + GCA000560365_00620 pdxI NADP-dependent oxidoreductase domain-containing protein COG:COG0667, COG:HR, EC:1.1.1.-, KEGG:K06607, RefSeq:WP_000808902.1, SO:0001217, UniParc:UPI00000547F3, UniRef:UniRef100_Q2G0G6, UniRef:UniRef50_Q2G0G6, UniRef:UniRef90_Q2G0G6 contig_1 cds 668253 668789 + GCA000560365_00621 wrbA FMN-dependent NADPH-azoreductase COG:C, COG:COG0655, RefSeq:WP_000633782.1, SO:0001217, UniParc:UPI00000547F2, UniRef:UniRef100_Q2G0G5, UniRef:UniRef50_A0A7U7PXP0, UniRef:UniRef90_A0A7U7PXP0 contig_1 cds 668958 669434 + GCA000560365_00622 rimI N-acetyltransferase domain-containing protein COG:COG0456, COG:J, RefSeq:WP_000477504.1, SO:0001217, UniParc:UPI00000547F1, UniRef:UniRef100_Q2G0G4, UniRef:UniRef50_Q2G0G4, UniRef:UniRef90_Q2G0G4 contig_1 cds 669474 670769 + GCA000560365_00623 ydhJ HD domain-containing protein COG:COG1078, COG:R, RefSeq:WP_000180230.1, SO:0001217, UniParc:UPI00000547F0, UniRef:UniRef100_Q2G0G3, UniRef:UniRef50_P39651, UniRef:UniRef90_Q2G0G3 contig_1 cds 670812 671318 + GCA000560365_00624 Cytosolic protein SO:0001217, UniParc:UPI00000D9CCC, UniRef:UniRef100_A0A7Z7QX47, UniRef:UniRef50_A0A0U1MGP2, UniRef:UniRef90_A0A0U1MGP2 contig_1 cds 671817 672827 + GCA000560365_00625 adhP alcohol dehydrogenase AdhP COG:COG1064, COG:G, EC:1.1.1.1, GO:0004022, GO:0008270, KEGG:K13953, RefSeq:WP_001200748.1, SO:0001217, UniParc:UPI00000547EE, UniRef:UniRef100_Q2G0G1, UniRef:UniRef50_P20368, UniRef:UniRef90_Q2G0G1 contig_1 cds 672902 673009 + GCA000560365_00626 hypothetical protein RefSeq:WP_000655099.1, SO:0001217, UniParc:UPI00000547ED, UniRef:UniRef100_Q2G0G0, UniRef:UniRef50_Q2G0G0, UniRef:UniRef90_Q2G0G0 contig_1 cds 673102 673518 + GCA000560365_00627 ywiB DUF1934 domain-containing protein COG:COG4506, COG:S, RefSeq:WP_000359086.1, SO:0001217, UniParc:UPI00006E396E, UniRef:UniRef100_W8U168, UniRef:UniRef50_A0A0D0SIW2, UniRef:UniRef90_A0A077V1W0 contig_1 cds 673515 675176 + GCA000560365_00628 argS arginine--tRNA ligase COG:COG0018, COG:J, EC:6.1.1.19, GO:0004814, GO:0005524, GO:0005737, GO:0006420, KEGG:K01887, RefSeq:WP_001021145.1, SO:0001217, UniParc:UPI00000547EA, UniRef:UniRef100_Q2G0F8, UniRef:UniRef50_P46906, UniRef:UniRef90_Q2G0F8 contig_1 ncRNA 675336 675555 - GCA000560365_00629 S35 Staphylococcus sRNA 35 (srn_0335) RFAM:RF02894, SO:0000655 contig_1 cds 675564 676199 + GCA000560365_00630 hP0602 Endonuclease III COG:COG2231, COG:L, KEGG:K07457, RefSeq:WP_000901764.1, SO:0001217, UniParc:UPI00000547E9, UniRef:UniRef100_Q2G0F7, UniRef:UniRef50_A0A0R2GA19, UniRef:UniRef90_A0A0U1MF38 contig_1 cds 676578 677465 + GCA000560365_00631 fepB ABC transporter substrate-binding protein COG:COG0614, COG:P, RefSeq:WP_000749059.1, SO:0001217, UniParc:UPI00004B5B46, UniRef:UniRef100_X5EJU1, UniRef:UniRef50_A0A380G1W9, UniRef:UniRef90_A0A6K1MU86 contig_1 cds 677577 678563 + GCA000560365_00632 fepD ABC-type Fe3+-siderophore transport system, permease component COG:COG0609, COG:P, SO:0001217, UniParc:UPI00015FD74E, UniRef:UniRef100_Q2G0F5, UniRef:UniRef50_A0A1D4I031, UniRef:UniRef90_Q2G0F5 contig_1 cds 678618 679337 + GCA000560365_00633 yigB HAD family hydrolase COG:COG1011, COG:H, RefSeq:WP_000365354.1, SO:0001217, UniParc:UPI00000547E7, UniRef:UniRef100_Q2G0F4, UniRef:UniRef50_A0A380G976, UniRef:UniRef90_A0A2K4AEL0 contig_1 cds 679321 680121 + GCA000560365_00634 menH 3-oxoadipate enol-lactonase COG:COG0596, COG:HR, RefSeq:WP_000362967.1, SO:0001217, UniParc:UPI00004B5B47, UniRef:UniRef100_Q2G0F3, UniRef:UniRef50_A0A0Y9U704, UniRef:UniRef90_A0A0Y9U704 contig_1 cds 680257 680763 + GCA000560365_00635 SA0570 family protein RefSeq:WP_000735558.1, SO:0001217, UniParc:UPI00000D76AE, UniRef:UniRef100_Q2G0F2, UniRef:UniRef50_Q49VF9, UniRef:UniRef90_A0A2K4AED1 contig_1 cds 680925 681641 + GCA000560365_00636 DUF1129 domain-containing protein RefSeq:WP_001222133.1, SO:0001217, UniParc:UPI00000D76FA, UniRef:UniRef100_Q2G0F1, UniRef:UniRef50_Q5HRC1, UniRef:UniRef90_A0A6H4BUY2 contig_1 cds 681810 682598 + GCA000560365_00637 menH AB hydrolase-1 domain-containing protein COG:COG0596, COG:HR, RefSeq:WP_001045421.1, SO:0001217, UniParc:UPI00000547E3, UniRef:UniRef100_Q2G0F0, UniRef:UniRef50_Q2G0F0, UniRef:UniRef90_Q2G0F0 contig_1 cds 682849 683223 - GCA000560365_00638 sarA global transcriptional regulator SarA COG:COG1846, COG:K, GO:0003677, GO:0003700, GO:0005737, GO:0006950, GO:0046872, RefSeq:WP_001018677.1, SO:0001217, UniParc:UPI000003718E, UniRef:UniRef100_Q2G2U9, UniRef:UniRef50_Q2G2U9, UniRef:UniRef90_Q2G2U9 contig_1 ncRNA 683388 683583 - GCA000560365_00639 Teg49 Teg49 sRNA RFAM:RF02696, SO:0000655 contig_1 cds 684171 684731 - GCA000560365_00640 DMT family transporter KEGG:K09936, SO:0001217, UniRef:UniRef50_UPI001F5851A8, UniRef:UniRef90_UPI0020280BB4 contig_1 cds 684939 685292 - GCA000560365_00641 tnp IS30 family ISSau5 transposase ORF B GO:0004803, RefSeq:WP_000803507.1, SO:0001217, UniParc:UPI0001D0D071, UniRef:UniRef100_A0A5A8VL66, UniRef:UniRef50_A0A5S9C679, UniRef:UniRef90_A0A5S9C679 contig_1 cds 685456 685959 - GCA000560365_00642 tnp IS30 family ISSau5 transposase ORF A IS:ISSau5, RefSeq:WP_000746375.1, SO:0001217, UniParc:UPI0001C0BFBA, UniRef:UniRef100_A0A0E8HLR7, UniRef:UniRef50_A0A380G5N9, UniRef:UniRef90_A0A0E8HLR7 contig_1 cds 686068 686424 - GCA000560365_00643 DUF4467 domain-containing protein RefSeq:WP_001255379.1, SO:0001217, UniParc:UPI0000696C52, UniRef:UniRef100_B6V384, UniRef:UniRef50_A0A068W7G9, UniRef:UniRef90_A0A068W7G9 contig_1 cds 686480 687070 - GCA000560365_00644 Transposon-related protein RefSeq:WP_000810443.1, SO:0001217, UniParc:UPI00003B161A, UniRef:UniRef100_A0A0H2WW60, UniRef:UniRef50_A0A0H2WW60, UniRef:UniRef90_A0A0H2WW60 contig_1 cds 687077 688123 - GCA000560365_00645 CHAP domain-containing protein RefSeq:WP_000247465.1, SO:0001217, UniParc:UPI0000696C53, UniRef:UniRef100_A0A5C8X3U9, UniRef:UniRef50_M9UWV1, UniRef:UniRef90_D3W9V6 contig_1 cds 688113 689960 - GCA000560365_00646 Mating channel protein RefSeq:WP_000681154.1, SO:0001217, UniParc:UPI0000696C54, UniRef:UniRef100_A0A127JEY2, UniRef:UniRef50_A0A0U1MRL8, UniRef:UniRef90_A0A0U1MRL8 contig_1 cds 689965 691323 - GCA000560365_00647 FtsK/SpoIIIE family protein RefSeq:WP_001251211.1, SO:0001217, UniParc:UPI0000696C55, UniRef:UniRef100_A0A6B0DD37, UniRef:UniRef50_D2JAR3, UniRef:UniRef90_D2JAR3 contig_1 cds 691377 693872 - GCA000560365_00648 DUF87 domain-containing protein RefSeq:WP_001049264.1, SO:0001217, UniParc:UPI00003B161E, UniRef:UniRef100_A0A7Z7QXW5, UniRef:UniRef50_A0A5S9ETT9, UniRef:UniRef90_A0A5S9ETT9 contig_1 cds 693907 694290 - GCA000560365_00649 Conjugal transfer protein RefSeq:WP_000358144.1, SO:0001217, UniParc:UPI00004B5C08, UniRef:UniRef100_A0A7Z7QXR8, UniRef:UniRef50_A0A5S9ETX5, UniRef:UniRef90_A0A5S9ETX5 contig_1 cds 694302 694562 - GCA000560365_00650 Transposon-related protein RefSeq:WP_000015639.1, SO:0001217, UniParc:UPI00004B5C09, UniRef:UniRef100_B6V391, UniRef:UniRef50_A0A0E1X7P8, UniRef:UniRef90_A0A0E1X7P8 contig_1 cds 694567 695622 - GCA000560365_00651 Conjugal transfer protein RefSeq:WP_000692003.1, SO:0001217, UniParc:UPI0000696C56, UniRef:UniRef100_A0A6B0DDF3, UniRef:UniRef50_A0A0U1MR86, UniRef:UniRef90_A0A0U1MR86 contig_1 cds 695683 696774 - GCA000560365_00652 Replication initiation protein-like C-terminal domain-containing protein KEGG:K07467, RefSeq:WP_000172939.1, SO:0001217, UniParc:UPI0000696C57, UniRef:UniRef100_A0A5A8VJ43, UniRef:UniRef50_D2JLH7, UniRef:UniRef90_D2JLH7 contig_1 cds 696949 697251 - GCA000560365_00653 Transposon-related protein RefSeq:WP_000386891.1, SO:0001217, UniParc:UPI00003B1623, UniRef:UniRef100_A0A7Z7W163, UniRef:UniRef50_A0A068W5Y0, UniRef:UniRef90_A0A068W5Y0 contig_1 cds 697265 697585 - GCA000560365_00654 DUF961 domain-containing protein RefSeq:WP_031808140.1, SO:0001217, UniParc:UPI000447AA47, UniRef:UniRef100_UPI000447AA47, UniRef:UniRef50_A0A380G6H8, UniRef:UniRef90_A0A0U1MRA0 contig_1 cds 697736 698020 - GCA000560365_00655 Transposon-related protein RefSeq:WP_000134545.1, SO:0001217, UniParc:UPI00004B5C0C, UniRef:UniRef100_B6V396, UniRef:UniRef50_A0A7U7ICX6, UniRef:UniRef90_A0A7U7ICX6 contig_1 cds 698056 698457 - GCA000560365_00656 EamA-like transporter family protein KEGG:K09936, SO:0001217, UniParc:UPI0001D0CA6C, UniRef:UniRef100_A0A5A8VJ48, UniRef:UniRef50_A0A7Z7YS44, UniRef:UniRef90_A0A5A8VJ48 contig_1 cds 698652 698876 - GCA000560365_00657 DUF2922 domain-containing protein RefSeq:WP_000169042.1, SO:0001217, UniParc:UPI00000547E0, UniRef:UniRef100_Q2G2V1, UniRef:UniRef50_Q2G2V1, UniRef:UniRef90_Q2G2V1 contig_1 cds 698893 699096 - GCA000560365_00658 DUF1659 domain-containing protein RefSeq:WP_000036088.1, SO:0001217, UniParc:UPI00000547DF, UniRef:UniRef100_X5E477, UniRef:UniRef50_G5JM78, UniRef:UniRef90_A0A2P8WWM5 contig_1 cds 699255 699815 + GCA000560365_00659 xerD DNA integration/recombination/invertion protein COG:COG4974, COG:L, RefSeq:WP_001044915.1, SO:0001217, UniParc:UPI00000D770E, UniRef:UniRef100_W8U156, UniRef:UniRef50_W8U156, UniRef:UniRef90_W8U156 contig_1 cds 699834 702236 + GCA000560365_00660 mnhA2 Na+/H+ antiporter Mnh2 subunit A BlastRules:WP_000060776, COG:COG2111, COG:P, GO:0005886, GO:0006811, GO:0015297, RefSeq:WP_000060776.1, SO:0001217, UniParc:UPI00000547DD, UniRef:UniRef100_Q2G2U8, UniRef:UniRef50_Q2G2U8, UniRef:UniRef90_Q2G2U8 contig_1 cds 702223 702648 + GCA000560365_00661 mnhB2 Na+/H+ antiporter Mnh2 subunit B BlastRules:WP_000661906, COG:COG2111, COG:P, GO:0005886, GO:0006811, GO:0015297, RefSeq:WP_000661906.1, SO:0001217, UniParc:UPI00000547DC, UniRef:UniRef100_Q2G214, UniRef:UniRef50_Q2G214, UniRef:UniRef90_Q2G214 contig_1 cds 702645 702989 + GCA000560365_00662 mnhC2 Na+/H+ antiporter Mnh2 subunit C BlastRules:WP_001048985, COG:COG1006, COG:P, GO:0005886, GO:0006811, GO:0015297, RefSeq:WP_001048985.1, SO:0001217, UniParc:UPI00000547DB, UniRef:UniRef100_Q2G213, UniRef:UniRef50_Q2G213, UniRef:UniRef90_Q2G213 contig_1 cds 702979 704475 + GCA000560365_00663 mnhD2 Na+/H+ antiporter Mnh2 subunit D BlastRules:WP_000950548, COG:COG0651, COG:CP, GO:0005886, GO:0008137, GO:0015297, GO:0042773, RefSeq:WP_000950548.1, SO:0001217, UniParc:UPI00000D9CD4, UniRef:UniRef100_Q0Q2J7, UniRef:UniRef50_Q0Q2J7, UniRef:UniRef90_Q0Q2J7 contig_1 cds 704476 704958 + GCA000560365_00664 mnhE2 Na+/H+ antiporter Mnh2 subunit E BlastRules:WP_001071973, COG:COG1863, COG:P, GO:0005886, GO:0008324, GO:0015297, RefSeq:WP_001071973.1, SO:0001217, UniParc:UPI00000547D9, UniRef:UniRef100_Q2G210, UniRef:UniRef50_Q2G210, UniRef:UniRef90_Q2G210 contig_1 cds 704955 705257 + GCA000560365_00665 mnhF2 Na+/H+ antiporter Mnh2 subunit F BlastRules:WP_000616642, COG:COG2212, COG:P, GO:0005886, GO:0015385, RefSeq:WP_000616642.1, SO:0001217, UniParc:UPI00000547D5, UniRef:UniRef100_P0C948, UniRef:UniRef50_P0C948, UniRef:UniRef90_P0C948 contig_1 cds 705232 705669 + GCA000560365_00666 mnhG2 Na+/H+ antiporter Mnh2 subunit G BlastRules:WP_001566533, COG:COG1320, COG:P, GO:0005886, GO:0015385, RefSeq:WP_000406611.1, SO:0001217, UniParc:UPI00000D9CD5, UniRef:UniRef100_Q2G2E1, UniRef:UniRef50_Q49VH5, UniRef:UniRef90_P0C947 contig_1 cds 706009 708051 + GCA000560365_00667 nhaP Cation/H+ exchanger transmembrane domain-containing protein COG:COG0025, COG:P, RefSeq:WP_000402172.1, SO:0001217, UniParc:UPI00000D9CD6, UniRef:UniRef100_A0A7Z7W222, UniRef:UniRef50_Q2G2E0, UniRef:UniRef90_Q2G2E0 contig_1 ncRNA 708246 708685 - GCA000560365_00668 rsaC RNA Staph. aureus C RFAM:RF01818, SO:0000655 contig_1 cds 709211 710140 - GCA000560365_00669 mntC manganese ABC transporter substrate-binding lipoprotein MntC COG:COG0803, COG:P, EC:7.2.2.5, GO:0015410, RefSeq:WP_000737654.1, SO:0001217, UniParc:UPI000005228B, UniRef:UniRef100_A0A7Z7QX41, UniRef:UniRef50_S2YNP1, UniRef:UniRef90_A0A7U7PYB7 contig_1 cds 710137 710973 - GCA000560365_00670 znuB Metal ABC transporter permease COG:COG1108, COG:P, RefSeq:WP_000889252.1, SO:0001217, UniParc:UPI00000547D1, UniRef:UniRef100_Q2G2D9, UniRef:UniRef50_S2XTU7, UniRef:UniRef90_A0A7U7EXG0 contig_1 cds 710967 711710 - GCA000560365_00671 znuC ABC transporter domain-containing protein COG:COG1121, COG:P, RefSeq:WP_000894464.1, SO:0001217, UniParc:UPI00000DCA56, UniRef:UniRef100_Q2G2L2, UniRef:UniRef50_A0A240BUN7, UniRef:UniRef90_Q2G2L2 contig_1 cds 711832 712476 + GCA000560365_00672 mntR Manganese transport regulator COG:COG1321, COG:K, RefSeq:WP_000954654.1, SO:0001217, UniParc:UPI00000547CF, UniRef:UniRef100_Q2G2L0, UniRef:UniRef50_Q5HRA0, UniRef:UniRef90_A0A2K4AED5 contig_1 cds 712556 713308 - GCA000560365_00673 M50 family metallopeptidase RefSeq:WP_001108545.1, SO:0001217, UniParc:UPI00003B1491, UniRef:UniRef100_Q2G2K9, UniRef:UniRef50_Q2G2K9, UniRef:UniRef90_Q2G2K9 contig_1 cds 713544 714308 + GCA000560365_00674 tarA N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase TarA COG:COG1922, COG:M, EC:2.4.1.187, GO:0019350, GO:0047244, GO:0071555, RefSeq:WP_000215388.1, SO:0001217, UniParc:UPI0000052300, UniRef:UniRef100_Q2G2L3, UniRef:UniRef50_Q2G2L3, UniRef:UniRef90_Q2G2L3 contig_1 cds 714369 715163 - GCA000560365_00675 tagH teichoic acids export ABC transporter ATP-binding subunit TagH COG:COG1134, COG:G, EC:7.5.2.4, GO:0005524, GO:0005886, GO:0015438, GO:0016020, GO:0016887, GO:0140359, RefSeq:WP_001103232.1, SO:0001217, UniParc:UPI00000D9CD8, UniRef:UniRef100_Q2G2L1, UniRef:UniRef50_Q2G2L1, UniRef:UniRef90_Q2G2L1 contig_1 cds 715510 716322 + GCA000560365_00676 tagG teichoic acids export ABC transporter permease subunit TagG BlastRules:WP_001273058, BlastRules:WP_003227928, COG:COG1682, COG:G, KEGG:K09692, RefSeq:WP_001273058.1, SO:0001217, UniParc:UPI00003D0D87, UniRef:UniRef100_Q2G2X5, UniRef:UniRef50_A0A7U7EU92, UniRef:UniRef90_A0A7U7EU92 contig_1 cds 716421 717524 + GCA000560365_00677 tarB teichoic acid glycerol-phosphate primase TarB COG:COG1887, COG:MI, EC:2.7.8.44, GO:0005886, GO:0019350, GO:0047355, GO:0071555, RefSeq:WP_001101603.1, SO:0001217, UniParc:UPI00000547CA, UniRef:UniRef100_Q2G2X4, UniRef:UniRef50_Q2G2X4, UniRef:UniRef90_Q2G2X4 contig_1 cds 717521 718582 + GCA000560365_00678 tagX Putative glycosyltransferase TagX COG:COG1216, COG:G, EC:2.4.-.-, GO:0008360, GO:0016757, GO:0019350, GO:0071555, RefSeq:WP_001212876.1, SO:0001217, UniParc:UPI0000696BD3, UniRef:UniRef100_A0A1S5ZS02, UniRef:UniRef50_O05154, UniRef:UniRef90_O05154 contig_1 cds 718645 719043 + GCA000560365_00679 tagD glycerol-3-phosphate cytidylyltransferase COG:COG0615, COG:M, EC:2.7.7.39, GO:0005737, GO:0019350, GO:0046872, GO:0047348, GO:0071555, RefSeq:WP_000832260.1, SO:0001217, UniParc:UPI00000547C8, UniRef:UniRef100_Q2G2X2, UniRef:UniRef50_Q2G2X2, UniRef:UniRef90_Q2G2X2 contig_1 cds 719160 720455 - GCA000560365_00680 pbp4 penicillin-binding protein PBP4 COG:COG1686, COG:M, RefSeq:WP_000793070.1, SO:0001217, UniParc:UPI00004B5B49, UniRef:UniRef100_Q2G2X6, UniRef:UniRef50_A0A218M1Q9, UniRef:UniRef90_A0A218M1Q9 contig_1 cds 720876 722603 + GCA000560365_00681 mdlB ABC transporter ATP-binding protein COG:COG1132, COG:V, RefSeq:WP_000817954.1, SO:0001217, UniParc:UPI00000547C5, UniRef:UniRef100_Q2G2E5, UniRef:UniRef50_Q2G2E5, UniRef:UniRef90_Q2G2E5 contig_1 cds 722962 724191 + GCA000560365_00682 nupC NupC/NupG family nucleoside CNT transporter COG:COG1972, COG:F, KEGG:K16323, RefSeq:WP_000479279.1, SO:0001217, UniParc:UPI00000549B9, UniRef:UniRef100_Q2G2E4, UniRef:UniRef50_Q2G2E4, UniRef:UniRef90_Q2G2E4 contig_1 ncRNA 724341 724517 - GCA000560365_00683 rsaD RNA Staph. aureus D RFAM:RF01819, SO:0000655 contig_1 cds 724716 725549 + GCA000560365_00684 yitT DUF2179 domain-containing protein COG:COG1284, COG:S, RefSeq:WP_001044662.1, SO:0001217, UniParc:UPI00003B1A72, UniRef:UniRef100_Q2G2E2, UniRef:UniRef50_Q2G2E2, UniRef:UniRef90_Q2G2E2 contig_1 cds 725831 726628 + GCA000560365_00685 fepC ABC transporter ATP-binding protein COG:COG1120, COG:PH, RefSeq:WP_001080809.1, SO:0001217, UniParc:UPI00000549B6, UniRef:UniRef100_Q2G1Z3, UniRef:UniRef50_R2PWZ5, UniRef:UniRef90_A0A2K4AE83 contig_1 cds 726664 727668 + GCA000560365_00686 fepD Ferrichrome ABC transporter (Permease) COG:COG0609, COG:P, RefSeq:WP_000184741.1, SO:0001217, UniParc:UPI00000CAC61, UniRef:UniRef100_Q2G1Z2, UniRef:UniRef50_B9E9G3, UniRef:UniRef90_A0A7U7JT50 contig_1 cds 727665 728681 + GCA000560365_00687 fepD Ferrichrome ABC transporter (Permease) COG:COG0609, COG:P, RefSeq:WP_000625882.1, SO:0001217, UniParc:UPI0000696BD4, UniRef:UniRef100_A0A1S6DUE2, UniRef:UniRef50_B9DKA5, UniRef:UniRef90_A0A0U1MFB2 contig_1 cds 728915 729883 + GCA000560365_00688 dhaK dihydroxyacetone kinase subunit DhaK COG:COG2376, COG:G, EC:2.7.1.121, GO:0004371, GO:0006071, RefSeq:WP_000976269.1, SO:0001217, UniParc:UPI00000549B2, UniRef:UniRef100_Q2G1Z0, UniRef:UniRef50_A0A0D6XPW7, UniRef:UniRef90_A0A380E3E7 contig_1 cds 729925 730509 + GCA000560365_00689 dhaL dihydroxyacetone kinase subunit DhaL COG:COG2376, COG:G, EC:2.7.1.121, GO:0006071, GO:0047324, RefSeq:WP_000867203.1, SO:0001217, UniParc:UPI00004B5B4B, UniRef:UniRef100_Q2G0E9, UniRef:UniRef50_A0A380G5G0, UniRef:UniRef90_A0AAE8PB82 contig_1 cds 730502 730864 + GCA000560365_00690 dhaM phosphoenolpyruvate--glycerone phosphotransferase COG:COG3412, COG:T, RefSeq:WP_001124167.1, SO:0001217, UniParc:UPI00000D781C, UniRef:UniRef100_Q2G0E8, UniRef:UniRef50_A0A2T4MIK7, UniRef:UniRef90_A0A0U1MGK2 contig_1 cds 730980 731477 + GCA000560365_00691 Immunity protein 30 domain-containing protein RefSeq:WP_001164085.1, SO:0001217, UniParc:UPI00000549AF, UniRef:UniRef100_Q2G0E7, UniRef:UniRef50_S2YNQ8, UniRef:UniRef90_A0A9X5XNP2 contig_1 cds 731933 733000 + GCA000560365_00692 ykvI Branched-chain amino acid transport system II carrier protein COG:COG3949, COG:S, RefSeq:WP_000980137.1, SO:0001217, UniParc:UPI00000549AE, UniRef:UniRef100_Q2G0E6, UniRef:UniRef50_K9AMJ6, UniRef:UniRef90_Q2G0E6 contig_1 cds 733151 734194 + GCA000560365_00693 aes Alpha/beta hydrolase fold-3 domain-containing protein COG:COG0657, COG:I, RefSeq:WP_001030771.1, SO:0001217, UniParc:UPI00000549AD, UniRef:UniRef100_Q2G0E5, UniRef:UniRef50_A0A240BV45, UniRef:UniRef90_Q2G0E5 contig_1 cds 734523 734951 + GCA000560365_00694 Cytosolic protein RefSeq:WP_000198504.1, SO:0001217, UniParc:UPI00000549AC, UniRef:UniRef100_Q2G0E3, UniRef:UniRef50_A0A7U7JT75, UniRef:UniRef90_Q2G0E3 contig_1 cds 735160 735666 - GCA000560365_00695 rimL N-acetyltransferase domain-containing protein COG:COG1670, COG:JO, RefSeq:WP_000940134.1, SO:0001217, UniParc:UPI00000549AB, UniRef:UniRef100_Q2G0E2, UniRef:UniRef50_Q2G0E2, UniRef:UniRef90_Q2G0E2 contig_1 cds 735779 736702 + GCA000560365_00696 graX auxiliary protein GraX/ApsX BlastRules:WP_000802946, BlastRules:WP_001832033, COG:COG0451, COG:M, RefSeq:WP_000802946.1, SO:0001217, UniParc:UPI00000549AA, UniRef:UniRef100_Q2G0E1, UniRef:UniRef50_Q2G0E1, UniRef:UniRef90_Q2G0E1 contig_1 cds 736718 737392 + GCA000560365_00697 graR response regulator transcription factor GraR/ApsR BlastRules:WP_001166505, BlastRules:WP_001832046, COG:COG0745, COG:TK, GO:0000156, GO:0000976, GO:0005829, GO:0006355, GO:0032993, GO:0046677, KEGG:K19078, RefSeq:WP_001166505.1, SO:0001217, UniParc:UPI0000696BD5, UniRef:UniRef100_Q2G0E0, UniRef:UniRef50_Q2G0E0, UniRef:UniRef90_Q2G0E0 contig_1 cds 737385 738425 + GCA000560365_00698 graS histidine kinase GraS/ApsS BlastRules:WP_001061252, BlastRules:WP_002468453, COG:COG0642, COG:T, EC:2.7.13.3, GO:0000155, GO:0004721, GO:0005524, GO:0005886, GO:0016036, GO:0046677, RefSeq:WP_001061252.1, SO:0001217, UniParc:UPI00000549A6, UniRef:UniRef100_Q2G0D9, UniRef:UniRef50_Q8NXR5, UniRef:UniRef90_Q8NXR5 contig_1 cds 738569 739330 + GCA000560365_00699 vraF ABC transporter ATP-binding protein VraF BlastRules:WP_001637630, BlastRules:WP_020363729, COG:COG1136, COG:M, KEGG:K19079, RefSeq:WP_000985996.1, SO:0001217, UniParc:UPI00000D77ED, UniRef:UniRef100_Q2G0D8, UniRef:UniRef50_O34697, UniRef:UniRef90_Q2G0D8 contig_1 cds 739320 741209 + GCA000560365_00700 vraG ABC transporter permease VraG BlastRules:WP_000143623, BlastRules:WP_002457535, KEGG:K19080, RefSeq:WP_000143623.1, SO:0001217, UniParc:UPI00004B5B4D, UniRef:UniRef100_Q2G0D7, UniRef:UniRef50_Q4L484, UniRef:UniRef90_A0A0H3JK48 contig_1 cds 741934 742551 + GCA000560365_00701 ykaA DUF47 domain-containing protein COG:COG1392, COG:P, RefSeq:WP_000491755.1, SO:0001217, UniParc:UPI00000549A3, UniRef:UniRef100_Q2G0D6, UniRef:UniRef50_A0A919WW74, UniRef:UniRef90_Q2G0D6 contig_1 cds 742567 743574 + GCA000560365_00702 pitA Inorganic phosphate transporter COG:COG0306, COG:P, KEGG:K03306, RefSeq:WP_000120368.1, SO:0001217, UniParc:UPI00000549A2, UniRef:UniRef100_Q2G0D5, UniRef:UniRef50_Q2G0D5, UniRef:UniRef90_Q2G0D5 contig_1 cds 744162 744959 - GCA000560365_00703 putative autolysin SsaALP COG:COG3942, COG:M, EC:3.5.1.28, GO:0008745, GO:0008932, GO:0031640, GO:0042742, GO:0071555, RefSeq:WP_000731644.1, SO:0001217, UniParc:UPI000005226B, UniRef:UniRef100_Q2G0D4, UniRef:UniRef50_Q2G0D4, UniRef:UniRef90_Q2G0D4 contig_1 cds 745320 745964 + GCA000560365_00704 ybhL Transporter COG:COG0670, COG:P, RefSeq:WP_000081602.1, SO:0001217, UniParc:UPI00000D76B5, UniRef:UniRef100_Q2G0D3, UniRef:UniRef50_Q2G0D3, UniRef:UniRef90_Q2G0D3 contig_1 cds 746661 748640 + GCA000560365_00705 araC HTH araC/xylS-type domain-containing protein COG:COG2207, COG:K, SO:0001217, UniParc:UPI0000696BD6, UniRef:UniRef100_A0A1S6BNL1, UniRef:UniRef50_Q2G0D2, UniRef:UniRef90_Q2G0D2 contig_1 cds 748637 748810 + GCA000560365_00706 hypothetical protein SO:0001217, UniRef:UniRef50_UPI00201FC901, UniRef:UniRef90_UPI00201FC901 contig_1 cds 748890 749315 + GCA000560365_00707 sarX HTH-type transcriptional regulator SarX GO:0003677, GO:0005737, GO:0006355, RefSeq:WP_000818255.1, SO:0001217, UniParc:UPI00004B5B4E, UniRef:UniRef100_A0A0D6G3K2, UniRef:UniRef50_Q2G0D1, UniRef:UniRef90_Q2G0D1 contig_1 cds 749505 750221 + GCA000560365_00708 tACO1 YebC/PmpR family DNA-binding transcriptional regulator COG:COG0217, COG:KJ, GO:0003677, GO:0005829, GO:0006355, RefSeq:WP_000532966.1, SO:0001217, UniParc:UPI0000054971, UniRef:UniRef100_Q2G0D0, UniRef:UniRef50_P0A8A2, UniRef:UniRef90_Q2G0D0 contig_1 cds 750221 750694 + GCA000560365_00709 cFF1 DUF985 domain-containing protein COG:COG3542, COG:R, KEGG:K09705, RefSeq:WP_000833483.1, SO:0001217, UniParc:UPI0000054969, UniRef:UniRef100_Q2G0C9, UniRef:UniRef50_Q2G0C9, UniRef:UniRef90_Q2G0C9 contig_1 cds 751047 751691 + GCA000560365_00710 DUF402 domain-containing protein COG:COG2306, COG:R, KEGG:K09145, RefSeq:WP_000865624.1, SO:0001217, UniParc:UPI00000D77F5, UniRef:UniRef100_Q2G0C7, UniRef:UniRef50_Q49VL4, UniRef:UniRef90_A0A7U7JT79 contig_1 cds 751807 752673 + GCA000560365_00711 lysR HTH lysR-type domain-containing protein COG:COG0583, COG:K, RefSeq:WP_000687411.1, SO:0001217, UniParc:UPI00004B5B4F, UniRef:UniRef100_Q2G0C6, UniRef:UniRef50_Q2G0C6, UniRef:UniRef90_Q2G0C6 contig_1 assembly_gap 752875 752974 . contig_1 cds 753091 754311 + GCA000560365_00712 Major facilitator superfamily protein superfamily KEGG:K03291, RefSeq:WP_000367064.1, SO:0001217, UniParc:UPI000005493E, UniRef:UniRef100_Q2G0C4, UniRef:UniRef50_Q2G0C4, UniRef:UniRef90_Q2G0C4 contig_1 cds 754308 754796 + GCA000560365_00713 yqgC DUF456 domain-containing protein COG:COG2839, COG:S, KEGG:K03291, RefSeq:WP_000152582.1, SO:0001217, UniParc:UPI0000054935, UniRef:UniRef100_Q2G0C3, UniRef:UniRef50_Q2G0C4, UniRef:UniRef90_Q2G0C3 contig_1 cds 754895 755584 - GCA000560365_00714 DUF1129 domain-containing protein COG:COG4858, COG:S, RefSeq:WP_000842860.1, SO:0001217, UniParc:UPI0000054922, UniRef:UniRef100_Q2G0C2, UniRef:UniRef50_Q2G0C2, UniRef:UniRef90_Q2G0C2 contig_1 cds 755711 756154 + GCA000560365_00715 N-acetyltransferase domain-containing protein RefSeq:WP_001259678.1, SO:0001217, UniParc:UPI00000D9CE7, UniRef:UniRef100_Q2G0C1, UniRef:UniRef50_Q2G0C1, UniRef:UniRef90_Q2G0C1 contig_1 cds 756221 756616 + GCA000560365_00716 SA0632 family lipoprotein RefSeq:WP_000733431.1, SO:0001217, UniParc:UPI0000054916, UniRef:UniRef100_Q2G0C0, UniRef:UniRef50_G5JIS8, UniRef:UniRef90_A0A0U1MGS1 contig_1 cds 756754 757053 + GCA000560365_00717 Phage protein RefSeq:WP_000545115.1, SO:0001217, UniParc:UPI000005490B, UniRef:UniRef100_Q2G0B9, UniRef:UniRef50_A0A240BWH3, UniRef:UniRef90_Q2G0B9 contig_1 cds 757133 757675 + GCA000560365_00718 rimL Acetyltransferase, GNAT family COG:COG1670, COG:JO, RefSeq:WP_000638613.1, SO:0001217, UniParc:UPI0000054900, UniRef:UniRef100_A0AA43V2W6, UniRef:UniRef50_A0A0U1MFJ7, UniRef:UniRef90_A0A0U1MFJ7 contig_1 cds 757771 758337 - GCA000560365_00719 ppnN Cytokinin riboside 5'-monophosphate phosphoribohydrolase COG:COG1611, COG:F, EC:3.2.2.-, KEGG:K22522, RefSeq:WP_000820892.1, SO:0001217, UniParc:UPI00000548EB, UniRef:UniRef100_Q2G0B7, UniRef:UniRef50_A0A9X5XNB6, UniRef:UniRef90_A0A0U1MFK8 contig_1 cds 758339 758797 - GCA000560365_00720 yaiI YaiI/YqxD family protein COG:COG1671, COG:S, KEGG:K09768, RefSeq:WP_000148828.1, SO:0001217, UniParc:UPI0000139B6F, UniRef:UniRef100_Q2G0B6, UniRef:UniRef50_Q2G0B6, UniRef:UniRef90_Q2G0B6 contig_1 cds 758800 759483 - GCA000560365_00721 hypothetical protein RefSeq:WP_000358498.1, SO:0001217, UniParc:UPI00000548D6, UniRef:UniRef100_Q2G0B5, UniRef:UniRef50_A0A0E1X7T8, UniRef:UniRef90_A0A0E1X7T8 contig_1 cds 759655 760530 - GCA000560365_00722 uppP undecaprenyl-diphosphate phosphatase COG:COG1968, COG:I, EC:3.6.1.27, GO:0005886, GO:0008360, GO:0009252, GO:0016020, GO:0016311, GO:0046677, GO:0050380, GO:0071555, RefSeq:WP_000469890.1, SO:0001217, UniParc:UPI0000696BD7, UniRef:UniRef100_Q2G0B4, UniRef:UniRef50_P94507, UniRef:UniRef90_Q9KIN5 contig_1 cds 760743 762374 + GCA000560365_00723 cydD ABC transporter ATP-binding protein/permease COG:CO, COG:COG4988, RefSeq:WP_000737143.1, SO:0001217, UniParc:UPI00004B5B51, UniRef:UniRef100_Q2G0B3, UniRef:UniRef50_A0A0H2VEV6, UniRef:UniRef90_Q2G0B3 contig_1 cds 762371 764044 + GCA000560365_00724 cydC Amino acid ABC transporter ATP-binding/permease protein COG:CO, COG:COG4987, RefSeq:WP_000857602.1, SO:0001217, UniParc:UPI00000548C2, UniRef:UniRef100_Q2G0B2, UniRef:UniRef50_A0A4U9TIQ0, UniRef:UniRef90_Q2G0B2 contig_1 cds 764171 764614 - GCA000560365_00725 mgrA HTH-type transcriptional regulator MgrA BlastRules:WP_001283444, COG:COG1846, COG:K, GO:0003677, GO:0003700, GO:0005737, GO:0006950, KEGG:K18906, RefSeq:WP_001283444.1, SO:0001217, UniParc:UPI00000548AE, UniRef:UniRef100_Q2G0B1, UniRef:UniRef50_Q2G0B1, UniRef:UniRef90_Q2G0B1 contig_1 cds 764841 765767 + GCA000560365_00726 yejR CobW C-terminal domain-containing protein COG:COG0523, COG:R, RefSeq:WP_000794407.1, SO:0001217, UniParc:UPI00000548AD, UniRef:UniRef100_Q2G0B0, UniRef:UniRef50_G5JL55, UniRef:UniRef90_Q2G0B0 contig_1 cds 765870 766778 + GCA000560365_00727 ydhF NADP-dependent oxidoreductase domain-containing protein COG:COG4989, COG:R, RefSeq:WP_000435108.1, SO:0001217, UniParc:UPI0000696BD8, UniRef:UniRef100_A0A5A8VP32, UniRef:UniRef50_Q2G0A9, UniRef:UniRef90_Q2G0A9 contig_1 cds 766813 767100 + GCA000560365_00728 hypothetical protein RefSeq:WP_000180419.1, SO:0001217, UniParc:UPI0000054899, UniRef:UniRef100_Q2G0A8, UniRef:UniRef50_Q2G0A8, UniRef:UniRef90_Q2G0A8 contig_1 cds 767382 768935 + GCA000560365_00729 citT Sodium-dependent dicarboxylate transporter SdcS COG:COG0471, COG:G, RefSeq:WP_001288049.1, SO:0001217, UniParc:UPI00004B5B52, UniRef:UniRef100_Q2G0A7, UniRef:UniRef50_M7PBF6, UniRef:UniRef90_A0A9N8IKH9 contig_1 cds 769021 770394 + GCA000560365_00730 phrB Deoxyribodipyrimidine photo-lyase COG:COG0415, COG:L, RefSeq:WP_000952048.1, SO:0001217, UniParc:UPI00004B5B53, UniRef:UniRef100_A0A0E7MV68, UniRef:UniRef50_A0A0E7MV68, UniRef:UniRef90_A0A390QMX5 contig_1 cds 770549 770833 - GCA000560365_00731 Membrane spanning protein RefSeq:WP_000154465.1, SO:0001217, UniParc:UPI00000D7813, UniRef:UniRef100_A0A7Z7QXJ8, UniRef:UniRef50_A0A2T4Q280, UniRef:UniRef90_A0A7Z7QXJ8 contig_1 cds 770830 771447 - GCA000560365_00732 DUF1361 domain-containing protein COG:COG4330, COG:S, RefSeq:WP_001191874.1, SO:0001217, UniParc:UPI00004B5B54, UniRef:UniRef100_Q2G0A4, UniRef:UniRef50_Q2G0A4, UniRef:UniRef90_Q2G0A4 contig_1 cds 771633 772055 - GCA000560365_00733 aF0104 PPC domain-containing protein COG:COG1661, COG:R, RefSeq:WP_000776018.1, SO:0001217, UniParc:UPI000005485D, UniRef:UniRef100_Q2G0A3, UniRef:UniRef50_Q2G0A3, UniRef:UniRef90_Q2G0A3 contig_1 cds 772264 773430 + GCA000560365_00734 norA Quinolone resistance protein NorA COG:COG2814, COG:G, GO:0005886, GO:0042910, RefSeq:WP_001041272.1, SO:0001217, UniParc:UPI00000522D0, UniRef:UniRef100_Q5HHX4, UniRef:UniRef50_P0A0J4, UniRef:UniRef90_P0A0J4 contig_1 cds 773711 774175 + GCA000560365_00735 Lipoprotein SO:0001217, UniParc:UPI00003B14D6, UniRef:UniRef100_Q2G0A1, UniRef:UniRef50_Q2G0A1, UniRef:UniRef90_Q2G0A1 contig_1 cds 774349 774831 + GCA000560365_00736 ybaK Cys-tRNA(Pro) deacylase COG:COG2606, COG:J, EC:3.1.1.-, GO:0002161, GO:0043039, KEGG:K03976, RefSeq:WP_001107241.1, SO:0001217, UniParc:UPI00000547C1, UniRef:UniRef100_Q2G0A0, UniRef:UniRef50_A0A2T4MLR5, UniRef:UniRef90_A0A0U1MHA1 contig_1 cds 775081 775845 + GCA000560365_00737 glpR HTH deoR-type domain-containing protein COG:COG1349, COG:KG, RefSeq:WP_000972699.1, SO:0001217, UniParc:UPI000069AA73, UniRef:UniRef100_Q2G240, UniRef:UniRef50_Q2G240, UniRef:UniRef90_Q2G240 contig_1 cds 775842 776762 + GCA000560365_00738 pfkB 1-phosphofructokinase COG:COG1105, COG:G, EC:2.7.1.56, GO:0008662, KEGG:K00882, RefSeq:WP_000640743.1, SO:0001217, UniParc:UPI00000547BF, UniRef:UniRef100_Q2G238, UniRef:UniRef50_Q9KWK1, UniRef:UniRef90_Q9KWK1 contig_1 cds 776768 778726 + GCA000560365_00739 ptsN PTS fructose transporter subunit IIC COG:COG1762, COG:GT, RefSeq:WP_001266541.1, SO:0001217, UniParc:UPI0000696BD9, UniRef:UniRef100_Q2G239, UniRef:UniRef50_B9DK53, UniRef:UniRef90_A0A389U8J0 contig_1 cds 779034 780215 + GCA000560365_00740 nagA N-acetylglucosamine-6-phosphate deacetylase COG:COG1820, COG:G, EC:3.5.1.25, GO:0006044, GO:0008448, KEGG:K01443, RefSeq:WP_001292247.1, SO:0001217, UniParc:UPI00004B5B57, UniRef:UniRef100_A0A0D6G8V3, UniRef:UniRef50_A0A0D6G8V3, UniRef:UniRef90_A0A0D6G8V3 contig_1 cds 780436 781785 + GCA000560365_00741 mpfA HlyC/CorC family transporter COG:COG1253, COG:PT, KEGG:K03699, RefSeq:WP_000450257.1, SO:0001217, UniParc:UPI00000D780F, UniRef:UniRef100_Q2G2T9, UniRef:UniRef50_A0A380G318, UniRef:UniRef90_Q2G2T9 contig_1 cds 782007 782846 + GCA000560365_00742 aRA1 Aldo/keto reductase COG:COG0656, COG:Q, RefSeq:WP_000931237.1, SO:0001217, UniParc:UPI00000547BA, UniRef:UniRef100_Q2G2T8, UniRef:UniRef50_A0A7U7PXK1, UniRef:UniRef90_A0A0U1MH70 contig_1 cds 782978 783961 + GCA000560365_00743 csbB lipoteichoic acid-specific glycosylation protein CsbB BlastRules:WP_000702782, COG:COG0463, COG:M, EC:2.4.-.-, KEGG:K25617, RefSeq:WP_000702782.1, SO:0001217, UniParc:UPI00000547B8, UniRef:UniRef100_Q2G2T7, UniRef:UniRef50_B9DKD4, UniRef:UniRef90_A0AAE8PA40 contig_1 cds 784033 785088 - GCA000560365_00744 saeS two-component system sensor histidine kinase SaeS BlastRules:WP_000244412, COG:COG0642, COG:T, EC:2.7.13.3, GO:0000155, GO:0004721, GO:0005524, GO:0005886, GO:0016036, KEGG:K10681, RefSeq:WP_000244412.1, SO:0001217, UniParc:UPI00000547B7, UniRef:UniRef100_Q2G2U1, UniRef:UniRef50_Q2G2U1, UniRef:UniRef90_Q2G2U1 contig_1 cds 785088 785774 - GCA000560365_00745 saeR response regulator transcription factor SaeR BlastRules:WP_000149344, BlastRules:WP_001830352, COG:COG0745, COG:TK, GO:0000156, GO:0000976, GO:0005829, GO:0006355, GO:0032993, KEGG:K10682, RefSeq:WP_000149344.1, SO:0001217, UniParc:UPI00000547B6, UniRef:UniRef100_Q2G2G2, UniRef:UniRef50_Q2G2G2, UniRef:UniRef90_Q2G2G2 contig_1 cds 785749 786222 - GCA000560365_00746 doxX DoxX family protein RefSeq:WP_001037807.1, SO:0001217, UniParc:UPI000018DB08, UniRef:UniRef100_Q2G2G1, UniRef:UniRef50_Q2G2G1, UniRef:UniRef90_Q2G2G1 contig_1 cds 786564 787004 - GCA000560365_00747 DM13 domain-containing protein RefSeq:WP_001093553.1, SO:0001217, UniParc:UPI00000547B4, UniRef:UniRef100_Q2G2G0, UniRef:UniRef50_Q2G2G0, UniRef:UniRef90_Q2G2G0 contig_1 cds 787284 787868 - GCA000560365_00748 hypothetical protein RefSeq:WP_000637687.1, SO:0001217, UniParc:UPI00004B5B58, UniRef:UniRef100_Q2G2F9, UniRef:UniRef50_Q2G2F9, UniRef:UniRef90_Q2G2F9 contig_1 cds 787967 788680 - GCA000560365_00749 queE 7-carboxy-7-deazaguanine synthase QueE COG:COG0602, COG:H, EC:4.3.99.3, GO:0006400, GO:0051539, GO:1904047, KEGG:K10026, RefSeq:WP_001062972.1, SO:0001217, UniParc:UPI00000547B2, UniRef:UniRef100_Q2G1X7, UniRef:UniRef50_Q81G67, UniRef:UniRef90_A0A7Z7QY94 contig_1 cds 788684 789103 - GCA000560365_00750 queD 6-carboxytetrahydropterin synthase QueD COG:COG0720, COG:H, EC:4.1.2.50, EC:4.2.3.12, GO:0003824, GO:0008616, KEGG:K01737, RefSeq:WP_000941336.1, SO:0001217, UniParc:UPI00000D7847, UniRef:UniRef100_Q2G1X5, UniRef:UniRef50_A0A0D6XSA1, UniRef:UniRef90_A0A2S6D445 contig_1 cds 789105 789773 - GCA000560365_00751 queC 7-cyano-7-deazaguanine synthase QueC COG:COG0603, COG:J, EC:6.3.4.20, GO:0005524, GO:0008270, GO:0008616, GO:0016879, KEGG:K06920, RefSeq:WP_000446724.1, SO:0001217, UniParc:UPI00000D7650, UniRef:UniRef100_Q2G1X6, UniRef:UniRef50_O31675, UniRef:UniRef90_Q2G1X6 contig_1 cds 790124 790717 + GCA000560365_00752 pabA Aminodeoxychorismate/anthranilate synthase component II COG:COG0512, COG:EH, RefSeq:WP_000604514.1, SO:0001217, UniParc:UPI00000547AE, UniRef:UniRef100_Q2G099, UniRef:UniRef50_A0A2T7BWH4, UniRef:UniRef90_A0A2S6D430 contig_1 cds 790701 791852 + GCA000560365_00753 trpE Aminodeoxychorismate synthase component I COG:COG0147, COG:EH, RefSeq:WP_001217785.1, SO:0001217, UniParc:UPI0000696BDA, UniRef:UniRef100_Q2G098, UniRef:UniRef50_A0A418IG77, UniRef:UniRef90_A0AAE2ZQN1 contig_1 cds 791852 792460 + GCA000560365_00754 ilvE Aminodeoxychorismate lyase COG:COG0115, COG:EH, RefSeq:WP_001175781.1, SO:0001217, UniParc:UPI00000547AC, UniRef:UniRef100_Q2G097, UniRef:UniRef50_A0A380H6Y2, UniRef:UniRef90_A0AAE8TJ44 contig_1 ncRNA 792592 792671 - GCA000560365_00755 sau-66 Staphylococcus sRNA sau-66 RFAM:RF02395, SO:0000655 contig_1 cds 792820 793530 + GCA000560365_00756 pxpB Carboxyltransferase domain-containing protein COG:COG2049, COG:E, RefSeq:WP_000708692.1, SO:0001217, UniParc:UPI00000547AA, UniRef:UniRef100_Q2G095, UniRef:UniRef50_A0A143PAI6, UniRef:UniRef90_Q2G095 contig_1 cds 793514 794518 + GCA000560365_00757 pxpC Carboxyltransferase domain-containing protein COG:COG1984, COG:E, RefSeq:WP_000022323.1, SO:0001217, UniParc:UPI00000547A9, UniRef:UniRef100_Q2G094, UniRef:UniRef50_Q2G094, UniRef:UniRef90_Q2G094 contig_1 cds 794992 796932 + GCA000560365_00758 ltaS polyglycerol-phosphate lipoteichoic acid synthase LtaS BlastRules:WP_000098285, COG:COG1368, COG:M, EC:2.7.8.20, GO:0005576, GO:0005886, GO:0016740, GO:0046872, GO:0070395, GO:0071555, KEGG:K19005, RefSeq:WP_000098285.1, SO:0001217, UniParc:UPI00000547A8, UniRef:UniRef100_Q2G093, UniRef:UniRef50_Q797B3, UniRef:UniRef90_Q2G093 contig_1 cds 797209 799086 + GCA000560365_00759 abc-f ribosomal protection-like ABC-F family protein COG:COG0488, COG:R, GO:0003677, GO:0005524, GO:0016887, SO:0001217, UniParc:UPI0001EFF0C4, UniRef:UniRef100_A0A5A8VP02, UniRef:UniRef50_S2Y7N2, UniRef:UniRef90_A0A7U7PXX1 contig_1 cds 799098 800879 + GCA000560365_00760 recQ DNA helicase RecQ COG:COG0514, COG:L, EC:5.6.2.4, GO:0003678, GO:0006310, GO:0009432, RefSeq:WP_000983677.1, SO:0001217, UniParc:UPI00000547A6, UniRef:UniRef100_Q2G090, UniRef:UniRef50_Q2G090, UniRef:UniRef90_Q2G090 contig_1 cds 801101 802078 + GCA000560365_00761 opuBA ABC transporter ATP-binding protein COG:COG1125, COG:E, RefSeq:WP_000589260.1, SO:0001217, UniParc:UPI0000696BDC, UniRef:UniRef100_Q2G089, UniRef:UniRef50_D7UZC8, UniRef:UniRef90_A0A389QD38 contig_1 cds 802071 803585 + GCA000560365_00762 egtUBC putative ergothioneine transporter EgtUBC COG:COG1732, COG:M, GO:0015675, GO:0016597, GO:0016787, GO:0022857, GO:0031460, GO:0043190, RefSeq:WP_000180991.1, SO:0001217, UniParc:UPI00000547A2, UniRef:UniRef100_A0A0H2XK79, UniRef:UniRef50_A0A0H2XK79, UniRef:UniRef90_A0A0H2XK79 contig_1 cds 803825 804883 + GCA000560365_00763 hisC histidinol-phosphate transaminase COG:COG0079, COG:E, EC:2.6.1.9, GO:0000105, GO:0004400, GO:0030170, KEGG:K00817, RefSeq:WP_000663030.1, SO:0001217, UniParc:UPI000012C89E, UniRef:UniRef100_Q2G087, UniRef:UniRef50_Q2G087, UniRef:UniRef90_Q2G087 contig_1 ncRNA 804875 805098 + GCA000560365_00764 S35 Staphylococcus sRNA 35 (srn_0335) RFAM:RF02894, SO:0000655 contig_1 cds 805234 805776 + GCA000560365_00765 yorC Putative 5'(3')-deoxyribonucleotidase COG:COG4502, COG:F, EC:3.1.3.-, GO:0008253, GO:0009223, GO:0046872, RefSeq:WP_000197273.1, SO:0001217, UniParc:UPI0000696BDD, UniRef:UniRef100_A0A5A8VJT2, UniRef:UniRef50_Q5HR07, UniRef:UniRef90_P66840 contig_1 cds 806400 807317 - GCA000560365_00766 lCB5 Putative lipid kinase SA0681 COG:COG1597, COG:IR, EC:2.7.1.-, GO:0004143, GO:0005524, GO:0005886, GO:0008654, GO:0046872, RefSeq:WP_000429014.1, SO:0001217, UniParc:UPI000005479F, UniRef:UniRef100_Q2G084, UniRef:UniRef50_Q6GIR5, UniRef:UniRef90_Q6GIR5 contig_1 cds 807587 809092 - GCA000560365_00767 yjdL Di/tripeptide permease YjdL RefSeq:WP_000193752.1, SO:0001217, UniParc:UPI0000696BDF, UniRef:UniRef100_A0A1S6A8I7, UniRef:UniRef50_Q2G082, UniRef:UniRef90_A0A2X2KIZ1 contig_1 cds 809433 809933 - GCA000560365_00768 queF preQ(1) synthase COG:COG0780, COG:J, EC:1.7.1.13, GO:0005737, GO:0006400, GO:0008616, GO:0033739, GO:0046857, RefSeq:WP_000930014.1, SO:0001217, UniParc:UPI000005479D, UniRef:UniRef100_Q2G081, UniRef:UniRef50_Q2G081, UniRef:UniRef90_Q2G081 contig_1 cds 809953 810819 - GCA000560365_00769 rhaT EamA domain-containing protein COG:COG0697, COG:GER, RefSeq:WP_001068497.1, SO:0001217, UniParc:UPI00000D9CFA, UniRef:UniRef100_Q2G080, UniRef:UniRef50_Q2G080, UniRef:UniRef90_Q2G080 contig_1 cds 811620 812018 + GCA000560365_00770 nrdI class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI COG:COG1780, COG:F, GO:0009263, GO:0010181, GO:0036211, KEGG:K03647, RefSeq:WP_000692521.1, SO:0001217, UniParc:UPI00001304E3, UniRef:UniRef100_Q2G079, UniRef:UniRef50_Q2G079, UniRef:UniRef90_Q2G079 contig_1 cds 811981 814086 + GCA000560365_00771 nrdE class 1b ribonucleoside-diphosphate reductase subunit alpha COG:COG0209, COG:F, EC:1.17.4.1, GO:0004748, GO:0005524, GO:0006260, RefSeq:WP_000855505.1, SO:0001217, UniParc:UPI000005479A, UniRef:UniRef100_Q2G078, UniRef:UniRef50_A0A240A193, UniRef:UniRef90_A0AAE3D4Q3 contig_1 cds 814204 815175 + GCA000560365_00772 nrdF class 1b ribonucleoside-diphosphate reductase subunit beta COG:COG0208, COG:F, EC:1.17.4.1, GO:0004748, GO:0005971, GO:0009263, RefSeq:WP_000562498.1, SO:0001217, UniParc:UPI0000054799, UniRef:UniRef100_Q2G077, UniRef:UniRef50_A0A1L8Y4Q5, UniRef:UniRef90_A0A1L8Y4Q5 contig_1 cds 815841 816854 + GCA000560365_00773 ceuB FatD COG:COG4606, COG:P, SO:0001217, UniParc:UPI0000054795, UniRef:UniRef100_A0A0D6I039, UniRef:UniRef50_P94418, UniRef:UniRef90_A0A0D6I039 contig_1 cds 816841 817797 + GCA000560365_00774 ceuC Iron (Fe+3) ABC superfamily ATP binding cassette transporter, membrane protein COG:COG4605, COG:P, RefSeq:WP_001245577.1, SO:0001217, UniParc:UPI00000CAA00, UniRef:UniRef100_W8TNI3, UniRef:UniRef50_W8TNI3, UniRef:UniRef90_W8TNI3 contig_1 cds 817794 818555 + GCA000560365_00775 ceuD ABC transporter domain-containing protein COG:COG4604, COG:P, RefSeq:WP_000616842.1, SO:0001217, UniParc:UPI0000054793, UniRef:UniRef100_Q2G072, UniRef:UniRef50_Q81XB3, UniRef:UniRef90_Q2G072 contig_1 cds 818674 819702 + GCA000560365_00776 ceuA Fe/B12 periplasmic-binding domain-containing protein COG:COG4607, COG:P, RefSeq:WP_000754443.1, SO:0001217, UniParc:UPI0000054792, UniRef:UniRef100_Q2G071, UniRef:UniRef50_A0A239ZZP9, UniRef:UniRef90_Q2G071 contig_1 cds 820019 820333 - GCA000560365_00777 hot13 CHY-type domain-containing protein COG:COG4357, COG:O, RefSeq:WP_001127269.1, SO:0001217, UniParc:UPI00000D78A9, UniRef:UniRef100_Q2G070, UniRef:UniRef50_A0A166MHJ2, UniRef:UniRef90_Q2G070 contig_1 cds 820351 821274 - GCA000560365_00778 murB UDP-N-acetylmuramate dehydrogenase COG:COG0812, COG:M, EC:1.3.1.98, GO:0005829, GO:0008360, GO:0008762, GO:0009252, GO:0051301, GO:0071555, GO:0071949, RefSeq:WP_000608440.1, SO:0001217, UniParc:UPI00000025F4, UniRef:UniRef100_Q2G069, UniRef:UniRef50_A4ILI2, UniRef:UniRef90_Q2G069 contig_1 cds 821401 821919 - GCA000560365_00779 grpB GrpB family protein COG:COG2320, COG:R, RefSeq:WP_000287207.1, SO:0001217, UniParc:UPI000005478E, UniRef:UniRef100_Q2G068, UniRef:UniRef50_Q5HQZ0, UniRef:UniRef90_Q2G068 contig_1 cds 822039 822917 + GCA000560365_00780 EMYY motif lipoprotein RefSeq:WP_000724887.1, SO:0001217, UniParc:UPI00000D77E2, UniRef:UniRef100_Q2G067, UniRef:UniRef50_A0A653Z4B0, UniRef:UniRef90_Q2G067 contig_1 cds 823071 823391 + GCA000560365_00781 ytxJ Bacillithiol system redox-active protein YtxJ KEGG:K26959, RefSeq:WP_000985617.1, SO:0001217, UniParc:UPI00000D78B4, UniRef:UniRef100_Q2G066, UniRef:UniRef50_Q2G066, UniRef:UniRef90_Q2G066 contig_1 cds 823816 824940 + GCA000560365_00782 glxK Glycerate kinase COG:COG1929, COG:G, EC:2.7.1.165, KEGG:K00865, RefSeq:WP_000866747.1, SO:0001217, UniParc:UPI0000696BE0, UniRef:UniRef100_A0A5C1MVR2, UniRef:UniRef50_A0A6N3ELY9, UniRef:UniRef90_Q2G065 contig_1 cds 825129 826355 - GCA000560365_00783 pepT peptidase T COG:COG2195, COG:E, EC:3.4.11.4, GO:0005829, GO:0006508, GO:0008237, GO:0008270, GO:0043171, GO:0045148, KEGG:K01258, RefSeq:WP_000795826.1, SO:0001217, UniParc:UPI0000054789, UniRef:UniRef100_Q2G064, UniRef:UniRef50_P55179, UniRef:UniRef90_Q2G064 contig_1 cds 826369 826863 - GCA000560365_00784 yjjB Threonine/Serine exporter ThrE domain-containing protein COG:C, COG:COG3610, RefSeq:WP_000899890.1, SO:0001217, UniParc:UPI00000522D1, UniRef:UniRef100_Q2G063, UniRef:UniRef50_Q2G063, UniRef:UniRef90_Q2G063 contig_1 cds 826881 827642 - GCA000560365_00785 yjjP Threonine/serine exporter-like N-terminal domain-containing protein COG:C, COG:COG2966, RefSeq:WP_001113406.1, SO:0001217, UniParc:UPI000005226C, UniRef:UniRef100_Q2G062, UniRef:UniRef50_A0A853V662, UniRef:UniRef90_Q2G062 contig_1 cds 827838 828908 - GCA000560365_00786 gGDEF putative membrane protein MW0708 COG:COG2199, COG:T, GO:0000155, GO:0005886, GO:0043709, GO:0052621, GO:0071555, GO:1902201, RefSeq:WP_000460983.1, SO:0001217, UniParc:UPI0000054788, UniRef:UniRef100_Q2G061, UniRef:UniRef50_Q5HQY3, UniRef:UniRef90_Q2G061 contig_1 cds 829226 830281 + GCA000560365_00787 rfe Glycosyl transferase family protein COG:COG0472, COG:M, EC:2.7.8.33, EC:2.7.8.35, KEGG:K02851, RefSeq:WP_000258151.1, SO:0001217, UniParc:UPI0000054787, UniRef:UniRef100_Q2G060, UniRef:UniRef50_A0A380GAZ8, UniRef:UniRef90_Q53761 contig_1 cds 830451 831092 - GCA000560365_00788 yIH1 YigZ family protein COG:COG1739, COG:R, RefSeq:WP_000192947.1, SO:0001217, UniParc:UPI0000054786, UniRef:UniRef100_Q2G059, UniRef:UniRef50_Q2G059, UniRef:UniRef90_Q2G059 contig_1 cds 831236 832102 + GCA000560365_00789 fakB1 fatty acid kinase binding subunit FakB1 COG:COG1307, COG:I, GO:0008289, RefSeq:WP_000686342.1, SO:0001217, UniParc:UPI0000139C1F, UniRef:UniRef100_Q8NXM4, UniRef:UniRef50_P0A0N1, UniRef:UniRef90_P0A0N1 contig_1 cds 832466 833548 + GCA000560365_00790 comFA Comf operon protein 1 COG:COG4098, COG:L, RefSeq:WP_001548033.1, SO:0001217, UniParc:UPI0000054783, UniRef:UniRef100_X5EK03, UniRef:UniRef50_S2XU73, UniRef:UniRef90_X5EK03 contig_1 cds 833541 834215 + GCA000560365_00791 comFC ComF family protein COG:COG1040, COG:R, KEGG:K02242, RefSeq:WP_001057965.1, SO:0001217, UniParc:UPI00000D76CA, UniRef:UniRef100_Q2G056, UniRef:UniRef50_Q2G056, UniRef:UniRef90_Q2G056 contig_1 cds 834276 834848 + GCA000560365_00792 hpf ribosome hibernation-promoting factor, HPF/YfiA family COG:COG1544, COG:J, GO:0005840, GO:0022627, GO:0043024, GO:0045182, GO:0045900, RefSeq:WP_000617735.1, SO:0001217, UniParc:UPI0000054781, UniRef:UniRef100_Q2G055, UniRef:UniRef50_P28368, UniRef:UniRef90_Q2G055 contig_1 cds 835262 837793 + GCA000560365_00793 secA preprotein translocase subunit SecA COG:COG0653, COG:U, EC:7.4.2.8, GO:0005524, GO:0005829, GO:0005886, GO:0006605, GO:0006886, GO:0008564, GO:0017038, GO:0031522, GO:0043952, GO:0046872, GO:0065002, KEGG:K03070, RefSeq:WP_000506531.1, SO:0001217, UniParc:UPI000005226D, UniRef:UniRef100_O06446, UniRef:UniRef50_O06446, UniRef:UniRef90_O06446 contig_1 cds 838226 839218 + GCA000560365_00794 prfB peptide chain release factor 2 COG:COG1186, COG:J, GO:0005737, GO:0006415, GO:0016149, GO:0075523, KEGG:K02836, SO:0001217, UniParc:UPI00000CAD02, UniRef:UniRef100_Q2G052, UniRef:UniRef50_Q49VV3, UniRef:UniRef90_Q6GIN7 contig_1 cds 839627 840466 + GCA000560365_00795 putative autolysin LDP COG:COG3942, COG:M, EC:3.5.1.28, GO:0008745, GO:0008932, GO:0031640, GO:0042742, GO:0071555, RefSeq:WP_000749380.1, SO:0001217, UniParc:UPI000005477F, UniRef:UniRef100_Q2G278, UniRef:UniRef50_Q2G278, UniRef:UniRef90_Q2G278 contig_1 cds 840640 841290 + GCA000560365_00796 yfbR HD domain-containing protein COG:COG1896, COG:FR, RefSeq:WP_000538141.1, SO:0001217, UniParc:UPI00000D7871, UniRef:UniRef100_Q2G277, UniRef:UniRef50_A0A239ZXJ0, UniRef:UniRef90_A0A2K4AJY4 contig_1 cds 841287 841523 + GCA000560365_00797 csbA DUF2198 domain-containing protein COG:COG4897, COG:S, RefSeq:WP_000638419.1, SO:0001217, UniParc:UPI000005477D, UniRef:UniRef100_Q2G051, UniRef:UniRef50_Q2G051, UniRef:UniRef90_Q2G051 contig_1 cds 841792 843777 + GCA000560365_00798 uvrB excinuclease ABC subunit UvrB COG:COG0556, COG:L, EC:3.1.25.-, GO:0003677, GO:0005515, GO:0005524, GO:0005737, GO:0006289, GO:0009380, GO:0009381, GO:0009432, GO:0016787, GO:0016887, KEGG:K03702, RefSeq:WP_000229253.1, SO:0001217, UniParc:UPI0000696BE1, UniRef:UniRef100_Q2G047, UniRef:UniRef50_P56981, UniRef:UniRef90_Q4L4I5 contig_1 cds 843785 846631 + GCA000560365_00799 uvrA excinuclease ABC subunit UvrA COG:COG0178, COG:L, EC:3.1.25.-, GO:0003677, GO:0005524, GO:0005737, GO:0006289, GO:0008270, GO:0009380, GO:0009381, GO:0009432, GO:0016887, KEGG:K03701, RefSeq:WP_000662675.1, SO:0001217, UniParc:UPI0000696BE2, UniRef:UniRef100_A0A1S6BNP7, UniRef:UniRef50_Q8F435, UniRef:UniRef90_P63382 contig_1 ncRNA 846872 847160 + GCA000560365_00800 S35 Staphylococcus sRNA 35 (srn_0335) RFAM:RF02894, SO:0000655 contig_1 cds 847293 848225 + GCA000560365_00801 hprK HPr(Ser) kinase/phosphatase COG:COG1493, COG:T, EC:2.7.11.-, EC:2.7.4.-, GO:0000155, GO:0000160, GO:0000287, GO:0004674, GO:0004712, GO:0005524, GO:0006109, KEGG:K06023, RefSeq:WP_000958224.1, SO:0001217, UniParc:UPI0000054778, UniRef:UniRef100_Q2G045, UniRef:UniRef50_O34483, UniRef:UniRef90_Q2G045 contig_1 cds 848231 849070 + GCA000560365_00802 lgt prolipoprotein diacylglyceryl transferase COG:COG0682, COG:M, EC:2.5.1.145, GO:0005886, GO:0008961, GO:0009249, GO:0016020, GO:0042158, RefSeq:WP_000513308.1, SO:0001217, UniParc:UPI0000054777, UniRef:UniRef100_Q2G044, UniRef:UniRef50_Q2G044, UniRef:UniRef90_Q2G044 contig_1 cds 849078 849563 + GCA000560365_00803 wbbJ Putative acetyltransferase MW0724 COG:COG0110, COG:R, EC:2.3.1.-, GO:0016746, RefSeq:WP_001224793.1, SO:0001217, UniParc:UPI00000D7694, UniRef:UniRef100_Q5HHQ6, UniRef:UniRef50_Q5HHQ6, UniRef:UniRef90_Q5HHQ6 contig_1 cds 849571 851010 + GCA000560365_00804 Beta-barrel assembly-enhancing protease RefSeq:WP_000057551.1, SO:0001217, UniParc:UPI0000696BE3, UniRef:UniRef100_A0A0E8GB80, UniRef:UniRef50_A0A2T4LUS3, UniRef:UniRef90_A0A389NUI4 contig_1 cds 851077 852012 + GCA000560365_00805 trxB thioredoxin-disulfide reductase COG:COG0492, COG:O, EC:1.8.1.9, GO:0004791, GO:0005737, GO:0019430, GO:0071949, KEGG:K00384, RefSeq:WP_000134963.1, SO:0001217, UniParc:UPI0000054774, UniRef:UniRef100_Q5HHQ4, UniRef:UniRef50_P80880, UniRef:UniRef90_Q5HHQ4 contig_1 ncRNA 852497 852748 + GCA000560365_00806 S35 Staphylococcus sRNA 35 (srn_0335) RFAM:RF02894, SO:0000655 contig_1 cds 852892 853803 + GCA000560365_00807 rapZ RNase adapter RapZ COG:COG1660, COG:T, GO:0005524, GO:0005525, KEGG:K06958, RefSeq:WP_000369722.1, SO:0001217, UniParc:UPI000004740A, UniRef:UniRef100_Q2G039, UniRef:UniRef50_Q2G039, UniRef:UniRef90_Q2G039 contig_1 cds 853800 854795 + GCA000560365_00808 cofD Gluconeogenesis factor COG:COG0391, COG:GH, RefSeq:WP_001248939.1, SO:0001217, UniParc:UPI000005476F, UniRef:UniRef100_Q2G038, UniRef:UniRef50_A0A0U1MHM9, UniRef:UniRef90_A0A0U1MHM9 contig_1 cds 854905 855849 + GCA000560365_00809 whiA DNA-binding protein WhiA COG:COG1481, COG:K, GO:0003677, GO:0043937, GO:0051301, RefSeq:WP_000006551.1, SO:0001217, UniParc:UPI000005476E, UniRef:UniRef100_Q2G037, UniRef:UniRef50_O06975, UniRef:UniRef90_Q2G037 contig_1 tRNA 856165 856236 - GCA000560365_00810 trnR (pseudo) tRNA-Arg(ccg) SO:0001036 contig_1 cds 856423 857010 + GCA000560365_00811 clpP ATP-dependent Clp endopeptidase proteolytic subunit ClpP COG:COG0740, COG:O, EC:3.4.21.92, GO:0004176, GO:0004252, GO:0005737, GO:0006508, GO:0006515, GO:0009368, GO:0051117, KEGG:K01358, RefSeq:WP_001049165.1, SO:0001217, UniParc:UPI000005476D, UniRef:UniRef100_Q2G036, UniRef:UniRef50_P80244, UniRef:UniRef90_Q2G036 contig_1 cds 857253 858122 - GCA000560365_00812 yfcH Epimerase family protein SAUSA300_0753 COG:COG1090, COG:R, KEGG:K07071, SO:0001217, UniParc:UPI0002CAB3E6, UniRef:UniRef100_Q2G035, UniRef:UniRef50_Q2G035, UniRef:UniRef90_Q2G035 contig_1 ncRNA 858304 858427 + GCA000560365_00813 rsaH RNA Staph. aureus H RFAM:RF01821, SO:0000655 contig_1 cds 858857 859486 + GCA000560365_00814 DUF4887 domain-containing protein RefSeq:WP_000070826.1, SO:0001217, UniParc:UPI00003B1509, UniRef:UniRef100_Q2G034, UniRef:UniRef50_Q2G034, UniRef:UniRef90_Q2G034 contig_1 ncRNA 859698 859956 + GCA000560365_00815 S35 Staphylococcus sRNA 35 (srn_0335) RFAM:RF02894, SO:0000655 contig_1 cds 860246 861259 + GCA000560365_00816 deoR Central glycolytic genes regulator COG:COG2390, COG:K, RefSeq:WP_000654030.1, SO:0001217, UniParc:UPI00000D76A7, UniRef:UniRef100_Q2G033, UniRef:UniRef50_A0A7V7VIG1, UniRef:UniRef90_A0A7Z1N475 contig_1 cds 861312 862322 + GCA000560365_00817 gap type I glyceraldehyde-3-phosphate dehydrogenase COG:COG0057, COG:G, EC:1.2.1.12, GO:0004365, GO:0005737, GO:0006006, GO:0006096, GO:0016620, GO:0050661, GO:0051287, RefSeq:WP_000279414.1, SO:0001217, UniParc:UPI000005229B, UniRef:UniRef100_Q5HHP5, UniRef:UniRef50_O52631, UniRef:UniRef90_Q5HQV4 contig_1 cds 862461 863651 + GCA000560365_00818 pgk Phosphoglycerate kinase COG:COG0126, COG:G, EC:2.7.2.3, GO:0004618, GO:0005524, GO:0005829, GO:0006094, GO:0006096, GO:0043531, KEGG:K00927, RefSeq:WP_001074749.1, SO:0001217, UniParc:UPI0000054769, UniRef:UniRef100_Q2G031, UniRef:UniRef50_Q8Y4I2, UniRef:UniRef90_Q2G031 contig_1 cds 863773 864534 + GCA000560365_00819 tpiA triose-phosphate isomerase COG:COG0149, COG:G, EC:5.3.1.1, GO:0004807, GO:0005829, GO:0006094, GO:0006096, GO:0019563, GO:0046166, KEGG:K01803, RefSeq:WP_001260089.1, SO:0001217, UniParc:UPI000013722C, UniRef:UniRef100_Q2FIL9, UniRef:UniRef50_Q5XD48, UniRef:UniRef90_Q2G030 contig_1 cds 864537 866054 + GCA000560365_00820 gpmI 2,3-bisphosphoglycerate-independent phosphoglycerate mutase COG:COG0696, COG:G, EC:5.4.2.12, GO:0005829, GO:0006007, GO:0006096, GO:0030145, GO:0046537, KEGG:K15633, RefSeq:WP_001085505.1, SO:0001217, UniParc:UPI0000054765, UniRef:UniRef100_Q5HHP2, UniRef:UniRef50_P64269, UniRef:UniRef90_P64269 contig_1 cds 866184 867488 + GCA000560365_00821 eno phosphopyruvate hydratase COG:COG0148, COG:G, EC:4.2.1.11, GO:0000015, GO:0000287, GO:0004634, GO:0005576, GO:0006096, GO:0009986, KEGG:K01689, RefSeq:WP_001121760.1, SO:0001217, UniParc:UPI0000054764, UniRef:UniRef100_Q2G028, UniRef:UniRef50_Q97QS2, UniRef:UniRef90_O69174 contig_1 cds 867828 868286 + GCA000560365_00822 DUF2127 domain-containing protein RefSeq:WP_000785252.1, SO:0001217, UniParc:UPI00000D770D, UniRef:UniRef100_Q2G027, UniRef:UniRef50_Q2G027, UniRef:UniRef90_Q2G027 contig_1 cds 868353 868586 + GCA000560365_00823 secG preprotein translocase subunit SecG COG:COG1314, COG:U, GO:0005886, GO:0009306, GO:0015136, GO:0015450, GO:0015739, GO:0016020, GO:0043952, GO:0065002, RefSeq:WP_000556760.1, SO:0001217, UniParc:UPI00000D77CD, UniRef:UniRef100_Q2G026, UniRef:UniRef50_Q2G026, UniRef:UniRef90_Q2G026 contig_1 cds 868702 869442 + GCA000560365_00824 yvaK Carboxylesterase, putative COG:COG1647, COG:Q, RefSeq:WP_001165952.1, SO:0001217, UniParc:UPI0000054761, UniRef:UniRef100_Q2G025, UniRef:UniRef50_Q2G025, UniRef:UniRef90_Q2G025 contig_1 cds 869476 871848 + GCA000560365_00825 rnr ribonuclease R COG:COG0557, COG:K, EC:3.1.13.1, GO:0003723, GO:0004518, KEGG:K12573, RefSeq:WP_001050064.1, SO:0001217, UniParc:UPI0000054760, UniRef:UniRef100_Q2G024, UniRef:UniRef50_O32231, UniRef:UniRef90_A0A7Z7QY34 contig_1 cds 871870 872334 + GCA000560365_00826 smpB SsrA-binding protein SmpB COG:COG0691, COG:O, GO:0003723, GO:0005829, GO:0070929, KEGG:K03664, RefSeq:WP_001085185.1, SO:0001217, UniParc:UPI000005475F, UniRef:UniRef100_Q2G023, UniRef:UniRef50_C4L5G5, UniRef:UniRef90_P66862 contig_1 tmRNA 872425 872783 + GCA000560365_00827 ssrA transfer-messenger RNA, SsrA SO:0000584 contig_1 cds 873656 873979 - GCA000560365_00828 Phage protein RefSeq:WP_001058299.1, SO:0001217, UniParc:UPI000005475E, UniRef:UniRef100_Q2G021, UniRef:UniRef50_A0A6G4N846, UniRef:UniRef90_A0A6G4N846 contig_1 cds 874333 875061 - GCA000560365_00829 DUF5067 domain-containing protein RefSeq:WP_000757406.1, SO:0001217, UniParc:UPI000005475B, UniRef:UniRef100_Q2G019, UniRef:UniRef50_Q2G019, UniRef:UniRef90_Q2G019 contig_1 cds 875660 876103 + GCA000560365_00830 SMODS-associated and fused to various effectors domain-containing protein SO:0001217, UniParc:UPI0000696BE5, UniRef:UniRef100_Q2G017, UniRef:UniRef50_K9AW58, UniRef:UniRef90_Q2G017 contig_1 cds 876320 876850 + GCA000560365_00831 yhbS N-acetyltransferase domain-containing protein COG:COG3153, COG:R, RefSeq:WP_001167175.1, SO:0001217, UniParc:UPI0000054759, UniRef:UniRef100_Q2G016, UniRef:UniRef50_Q2G016, UniRef:UniRef90_Q2G016 contig_1 cds 877113 879914 + GCA000560365_00832 clfA Clumping factor A, fibrinogen-binding protein GO:0005576, GO:0007155, RefSeq:WP_031808141.1, SO:0001217, UniParc:UPI00044A21A6, UniRef:UniRef100_UPI00044A21A6, UniRef:UniRef50_Q2G015, UniRef:UniRef90_Q2G015, VFDB:VFC0001, VFDB:VFG001289 contig_1 cds 880135 881661 + GCA000560365_00833 vwb secreted von Willebrand factor-binding protein precursor RefSeq:WP_000791729.1, SO:0001217, UniParc:UPI00000B2DBF, UniRef:UniRef100_Q93SM9, UniRef:UniRef50_E2FZT0, UniRef:UniRef90_Q93SM9, VFDB:VFC0251, VFDB:VFG002418 contig_1 cds 882012 883034 + GCA000560365_00834 emp extracellular matrix protein-binding adhesin Emp BlastRules:WP_000727726, BlastRules:WP_000728056, BlastRules:WP_031788349, BlastRules:WP_047447833, GO:0009986, RefSeq:WP_000728056.1, SO:0001217, UniParc:UPI00000B9920, UniRef:UniRef100_Q2G012, UniRef:UniRef50_P0C6P1, UniRef:UniRef90_P0C6P1 contig_1 cds 883369 883839 + GCA000560365_00835 Extracellular matrix and plasma binding protein RefSeq:WP_000824472.1, SO:0001217, UniParc:UPI0000054754, UniRef:UniRef100_Q2G011, UniRef:UniRef50_Q2G011, UniRef:UniRef90_Q2G011 contig_1 cds 884180 884866 + GCA000560365_00836 nuc Thermonuclease COG:COG1525, COG:L, EC:3.1.31.1, GO:0003676, GO:0005576, GO:0016894, GO:0046872, RefSeq:WP_001548082.1, SO:0001217, UniParc:UPI00004B5B68, UniRef:UniRef100_Q5HHM4, UniRef:UniRef50_P00644, UniRef:UniRef90_P00644 contig_1 cds 885223 885423 + GCA000560365_00837 cspA Cold shock protein CspA COG:COG1278, COG:K, KEGG:K03704, RefSeq:WP_001059082.1, SO:0001217, UniParc:UPI0000054751, UniRef:UniRef100_Q2G009, UniRef:UniRef50_A0A2X3Z2C5, UniRef:UniRef90_Q2G009 contig_1 cds 885919 886137 - GCA000560365_00838 hypothetical protein RefSeq:WP_000005886.1, SO:0001217, UniParc:UPI0000054750, UniRef:UniRef100_Q2G008, UniRef:UniRef50_Q2G008, UniRef:UniRef90_Q2G008 contig_1 cds 886199 886483 - GCA000560365_00839 Phage protein RefSeq:WP_001004395.1, SO:0001217, UniParc:UPI00004B5B69, UniRef:UniRef100_Q2G007, UniRef:UniRef50_Q2G007, UniRef:UniRef90_Q2G007 contig_1 cds 886571 887140 - GCA000560365_00840 lnsA lipoprotein N-acylation protein LnsA COG:COG3863, COG:S, EC:2.3.1.-, KEGG:K27957, RefSeq:WP_001106654.1, SO:0001217, UniParc:UPI00000D7840, UniRef:UniRef100_Q2G006, UniRef:UniRef50_A0A1J3ZZ65, UniRef:UniRef90_Q2G006 contig_1 cds 887328 887516 - GCA000560365_00841 tsaT type II toxin-antitoxin system toxin TsaT GO:0090729, GO:0110001, RefSeq:WP_000052078.1, SO:0001217, UniParc:UPI000069AA81, UniRef:UniRef100_Q2G005, UniRef:UniRef50_Q2G005, UniRef:UniRef90_Q2G005 contig_1 cds 887545 887805 - GCA000560365_00842 tsaA type II toxin-antitoxin system antitoxin TsaA GO:0110001, RefSeq:WP_001059690.1, SO:0001217, UniParc:UPI00000D774E, UniRef:UniRef100_Q2G004, UniRef:UniRef50_Q2G004, UniRef:UniRef90_Q2G004 contig_1 cds 888146 888349 + GCA000560365_00843 yozE YozE SAM-like domain-containing protein RefSeq:WP_000145163.1, SO:0001217, UniParc:UPI000005474D, UniRef:UniRef100_Q2G003, UniRef:UniRef50_Q2G003, UniRef:UniRef90_Q2G003 contig_1 cds 888346 888582 - GCA000560365_00844 CobW/HypB/UreG nucleotide-binding domain-containing protein RefSeq:WP_000368687.1, SO:0001217, UniParc:UPI00000D9D21, UniRef:UniRef100_Q2G1T2, UniRef:UniRef50_A0A9X4L8V2, UniRef:UniRef90_Q2G1T2 contig_1 cds 888807 889388 + GCA000560365_00845 phoE Phosphoglycerate mutase COG:COG0406, COG:G, RefSeq:WP_001140686.1, SO:0001217, UniParc:UPI00016991F1, UniRef:UniRef100_A0A0E8GAD0, UniRef:UniRef50_A0A0E8GAD0, UniRef:UniRef90_A0A0E8GAD0 contig_1 cds 889461 890078 - GCA000560365_00846 argO Amino acid transporter COG:COG1279, COG:E, KEGG:K06895, RefSeq:WP_000255561.1, SO:0001217, UniParc:UPI000005474A, UniRef:UniRef100_Q2G1T0, UniRef:UniRef50_Q2G1T0, UniRef:UniRef90_Q2G1T0 contig_1 cds 890233 890727 - GCA000560365_00847 N-acetyltransferase domain-containing protein RefSeq:WP_000569884.1, SO:0001217, UniParc:UPI0000054749, UniRef:UniRef100_Q2G1T4, UniRef:UniRef50_Q2G1T4, UniRef:UniRef90_Q2G1T4 contig_1 cds 891126 891548 - GCA000560365_00848 osmC Organic hydroperoxide resistance protein-like COG:COG1764, COG:V, EC:1.11.1.28, GO:0006979, KEGG:K04063, RefSeq:WP_000974460.1, SO:0001217, UniParc:UPI0000054748, UniRef:UniRef100_Q2G1T3, UniRef:UniRef50_Q49W40, UniRef:UniRef90_Q2G1T3 contig_1 cds 891696 892412 + GCA000560365_00849 aroD 3-dehydroquinate dehydratase COG:COG0710, COG:E, EC:4.2.1.10, GO:0003855, GO:0008652, GO:0009073, GO:0009423, GO:0046279, RefSeq:WP_000150017.1, SO:0001217, UniParc:UPI0000054747, UniRef:UniRef100_Q2G002, UniRef:UniRef50_Q6GII7, UniRef:UniRef90_Q6GII7 contig_1 cds 892495 893034 + GCA000560365_00850 nfnB Nitroreductase domain-containing protein COG:C, COG:COG0778, RefSeq:WP_000422909.1, SO:0001217, UniParc:UPI00004B5B6D, UniRef:UniRef100_A0A0E7NNB9, UniRef:UniRef50_Q2G001, UniRef:UniRef90_Q2G001 contig_1 cds 893184 893504 - GCA000560365_00851 Thioredoxin, putative RefSeq:WP_001190695.1, SO:0001217, UniParc:UPI0000054745, UniRef:UniRef100_Q2G000, UniRef:UniRef50_A0A0U1MGB8, UniRef:UniRef90_Q2G000 contig_1 cds 893648 894004 + GCA000560365_00852 arsC Arsenate reductase COG:COG1393, COG:P, RefSeq:WP_000589549.1, SO:0001217, UniParc:UPI0000054744, UniRef:UniRef100_Q2FZZ9, UniRef:UniRef50_A0A1D4Q7A2, UniRef:UniRef90_A0AAE8TJ65 contig_1 cds 894162 894542 + GCA000560365_00853 gcvH glycine cleavage system protein GcvH COG:COG0509, COG:E, GO:0005829, GO:0005960, GO:0019464, RefSeq:WP_000290485.1, SO:0001217, UniParc:UPI00004B5B6E, UniRef:UniRef100_Q2FZZ8, UniRef:UniRef50_P64213, UniRef:UniRef90_P64213 contig_1 cds 894606 894719 + GCA000560365_00854 hypothetical protein RefSeq:WP_000660172.1, SO:0001217, UniParc:UPI0000054742, UniRef:UniRef100_Q2FZZ7, UniRef:UniRef50_A0AA40JLX0, UniRef:UniRef90_A0AA40JLX0 contig_1 cds 894721 895599 + GCA000560365_00855 DUF1963 domain-containing protein RefSeq:WP_000932219.1, SO:0001217, UniParc:UPI0000696BE7, UniRef:UniRef100_A0A5A8VL07, UniRef:UniRef50_Q2FZZ6, UniRef:UniRef90_Q2FZZ6 contig_1 ncRNA 895642 895908 + GCA000560365_00856 S35 Staphylococcus sRNA 35 (srn_0335) RFAM:RF02894, SO:0000655 contig_1 cds 896338 896727 + GCA000560365_00857 rnmV Toprim domain-containing protein COG:COG1658, COG:J, SO:0001217, UniParc:UPI0001528018, UniRef:UniRef100_Q2FZZ4, UniRef:UniRef50_A0A1E5LDX5, UniRef:UniRef90_Q2FZZ4 contig_1 cds 896720 897016 + GCA000560365_00858 Thioredoxin domain-containing protein RefSeq:WP_001065801.1, SO:0001217, UniParc:UPI000005473F, UniRef:UniRef100_Q2FZZ3, UniRef:UniRef50_Q2FZZ3, UniRef:UniRef90_Q2FZZ3 contig_1 ncRNA-region 897074 897177 + SAM riboswitch aptamer (S box leader) RFAM:RF00162, SO:0000140 contig_1 cds 897266 898291 + GCA000560365_00859 metN2 Methionine import ATP-binding protein MetN 2 COG:COG1135, COG:E, EC:7.4.2.11, GO:0005524, GO:0005886, GO:0016887, GO:0033232, RefSeq:WP_000571218.1, SO:0001217, UniParc:UPI00000D9D28, UniRef:UniRef100_Q2FZZ2, UniRef:UniRef50_Q99VG8, UniRef:UniRef90_Q99VG8 contig_1 cds 898284 898979 + GCA000560365_00860 metP ABC transmembrane type-1 domain-containing protein COG:COG2011, COG:E, RefSeq:WP_000520233.1, SO:0001217, UniParc:UPI000005473C, UniRef:UniRef100_Q2FZZ1, UniRef:UniRef50_O32168, UniRef:UniRef90_Q2FZZ1 contig_1 cds 898997 899818 + GCA000560365_00861 nlpA Lipoprotein COG:COG1464, COG:P, KEGG:K02073, RefSeq:WP_000732326.1, SO:0001217, UniParc:UPI00000D9D29, UniRef:UniRef100_Q2FZZ0, UniRef:UniRef50_A0A380G8D6, UniRef:UniRef90_A0A0U1MGY2 contig_1 cds 899961 901181 - GCA000560365_00862 Int protein RefSeq:WP_000266158.1, SO:0001217, UniParc:UPI0000696BE8, UniRef:UniRef100_K7ZQ59, UniRef:UniRef50_A0A0C6DXB6, UniRef:UniRef90_A0A0C6DXB6 contig_1 cds 901269 901997 - GCA000560365_00863 sek staphylococcal enterotoxin type K BlastRules:WP_000733775, KEGG:K11040, NCBIProtein:AAW36439.1, RefSeq:WP_000734020.1, SO:0001217, UniParc:UPI0000696BE9, UniRef:UniRef100_A0A1S5YK26, UniRef:UniRef50_O54476, UniRef:UniRef90_O54476 contig_1 cds 902021 902749 - GCA000560365_00864 seq staphylococcal enterotoxin type Q BlastRules:WP_001033317, KEGG:K11040, NCBIProtein:EYN56163.1, RefSeq:WP_001033321.1, SO:0001217, UniParc:UPI0000696BEA, UniRef:UniRef100_K7ZK09, UniRef:UniRef50_Q9F0L7, UniRef:UniRef90_Q8VLW7 contig_1 cds 902766 903224 - GCA000560365_00865 ImmA/IrrE family metallo-endopeptidase RefSeq:WP_000281658.1, SO:0001217, UniParc:UPI0000696BEB, UniRef:UniRef100_K7ZRW0, UniRef:UniRef50_M9NUH9, UniRef:UniRef90_Q93CC8 contig_1 cds 903236 903568 - GCA000560365_00866 Transcriptional regulator RefSeq:WP_001260004.1, SO:0001217, UniParc:UPI00000B1396, UniRef:UniRef100_A0A976SFI2, UniRef:UniRef50_A0A3E0IKX3, UniRef:UniRef90_A0A976SFI2 contig_1 cds 903761 904024 + GCA000560365_00867 HTH cro/C1-type domain-containing protein RefSeq:WP_000243849.1, SO:0001217, UniParc:UPI00015FD72F, UniRef:UniRef100_A0A2C9TN82, UniRef:UniRef50_K7ZQ60, UniRef:UniRef90_K7ZQ60 contig_1 cds 904017 904289 + GCA000560365_00868 Excisionase RefSeq:WP_000091732.1, SO:0001217, UniParc:UPI0000696BED, UniRef:UniRef100_A0A1S5ZSH4, UniRef:UniRef50_X5IY47, UniRef:UniRef90_K7ZN19 contig_1 cds 904301 904474 + GCA000560365_00869 Pathogenicity island protein RefSeq:WP_000784892.1, SO:0001217, UniParc:UPI00003B13D3, UniRef:UniRef100_I2FJE6, UniRef:UniRef50_A0A0U1MQK6, UniRef:UniRef90_I2FJE6 contig_1 cds 904441 904644 + GCA000560365_00870 Pathogenicity island protein RefSeq:WP_001231376.1, SO:0001217, UniParc:UPI00005FE24C, UniRef:UniRef100_I2FJE7, UniRef:UniRef50_A0A0E1XAY4, UniRef:UniRef90_A0A0E1XAY4 contig_1 cds 904646 905029 + GCA000560365_00871 Pathogenicity island protein RefSeq:WP_000403840.1, SO:0001217, UniParc:UPI0000696BEE, UniRef:UniRef100_A0A1S6AYU9, UniRef:UniRef50_A0A0C6E6E7, UniRef:UniRef90_A0A0C6E6E7 contig_1 cds 905030 905278 + GCA000560365_00872 tscT type II toxin-antitoxin system toxin TscT GO:0090729, GO:0110001, RefSeq:WP_001103959.1, SO:0001217, UniParc:UPI0000696BEF, UniRef:UniRef100_A0A1S5ZIK6, UniRef:UniRef50_I7GY15, UniRef:UniRef90_I7GY15 contig_1 cds 905370 907742 + GCA000560365_00873 Replication initiator RefSeq:WP_000985235.1, SO:0001217, UniParc:UPI0000696BF0, UniRef:UniRef100_A0A1S5ZIL8, UniRef:UniRef50_E2FZQ1, UniRef:UniRef90_K7ZQ69 contig_1 cds 908413 908757 + GCA000560365_00874 Pathogenicity island protein RefSeq:WP_001081424.1, SO:0001217, UniParc:UPI0000696BF1, UniRef:UniRef100_E2FZQ2, UniRef:UniRef50_Q4L4M4, UniRef:UniRef90_E2FYW8 contig_1 cds 908982 909188 + GCA000560365_00875 Pathogenicity island protein RefSeq:WP_000884055.1, SO:0001217, UniParc:UPI00000D9D0F, UniRef:UniRef100_A0AAE8Z1U2, UniRef:UniRef50_A0AAE8Z1U2, UniRef:UniRef90_A0AAE8Z1U2 contig_1 cds 909175 910233 + GCA000560365_00876 Phage capsid protein RefSeq:WP_000657538.1, SO:0001217, UniParc:UPI00015FD732, UniRef:UniRef100_A0A1S6C723, UniRef:UniRef50_E2FZQ5, UniRef:UniRef90_E2FZQ5 contig_1 cds 910417 910908 + GCA000560365_00877 Pathogenicity island protein RefSeq:WP_000253084.1, SO:0001217, UniParc:UPI00015FD733, UniRef:UniRef100_A0A1S6A0P9, UniRef:UniRef50_A0A0H2XEB8, UniRef:UniRef90_A0A0H2XEB8 contig_1 cds 911337 912305 + GCA000560365_00878 Abi family protein RefSeq:WP_000801979.1, SO:0001217, UniParc:UPI00000CAE79, UniRef:UniRef100_I7H3R7, UniRef:UniRef50_I7H3R7, UniRef:UniRef90_I7H3R7 contig_1 cds 912540 913094 - GCA000560365_00879 Ampicillin resistance protein RefSeq:WP_001035618.1, SO:0001217, UniParc:UPI0000696BF4, UniRef:UniRef100_A0A2C9TN64, UniRef:UniRef50_M9NUJ8, UniRef:UniRef90_A0A2C9TN64 contig_1 cds 914128 914322 + GCA000560365_00880 yjbJ UPF0337 protein SAR0874 COG:COG3237, COG:S, RefSeq:WP_000752917.1, SO:0001217, UniParc:UPI000005473A, UniRef:UniRef100_Q2FZY9, UniRef:UniRef50_Q2FZY9, UniRef:UniRef90_Q2FZY9 contig_1 cds 914555 915406 - GCA000560365_00881 popT Polyprenyl-phosphate transporter COG:COG2035, COG:M, GO:0005886, GO:0071555, KEGG:K08974, RefSeq:WP_001183858.1, SO:0001217, UniParc:UPI0000054739, UniRef:UniRef100_Q2FZY8, UniRef:UniRef50_Q2FZY8, UniRef:UniRef90_Q2FZY8 contig_1 cds 915734 916495 + GCA000560365_00882 sufC Fe-S cluster assembly ATPase SufC COG:COG0396, COG:O, GO:0005524, GO:0016226, RefSeq:WP_000168845.1, SO:0001217, UniParc:UPI0000054738, UniRef:UniRef100_Q2FZY7, UniRef:UniRef50_A0A1G4NXF9, UniRef:UniRef90_Q5HQQ2 contig_1 cds 916593 917900 + GCA000560365_00883 sufD Fe-S cluster assembly protein SufD COG:COG0719, COG:O, GO:0016226, KEGG:K09015, RefSeq:WP_000205572.1, SO:0001217, UniParc:UPI000005228C, UniRef:UniRef100_Q2FZY6, UniRef:UniRef50_O32165, UniRef:UniRef90_Q2FZY6 contig_1 cds 918015 919256 + GCA000560365_00884 csd putative cysteine desulfurase COG:COG0520, COG:E, EC:2.8.1.7, GO:0006534, GO:0030170, GO:0031071, SO:0001217, UniParc:UPI00000D9D2B, UniRef:UniRef100_Q5HHH0, UniRef:UniRef50_O32164, UniRef:UniRef90_P63518 contig_1 cds 919246 919710 + GCA000560365_00885 sufU Fe-S cluster assembly sulfur transfer protein SufU COG:COG0822, COG:O, GO:0005198, GO:0016226, RefSeq:WP_001010508.1, SO:0001217, UniParc:UPI0000054735, UniRef:UniRef100_Q2FZY4, UniRef:UniRef50_O32163, UniRef:UniRef90_Q2FZY4 contig_1 cds 919861 921258 + GCA000560365_00886 sufB Fe-S cluster assembly protein SufB COG:COG0719, COG:O, GO:0016226, RefSeq:WP_001074405.1, SO:0001217, UniParc:UPI00000D7837, UniRef:UniRef100_Q2FZY3, UniRef:UniRef50_O32162, UniRef:UniRef90_Q2FZY3 contig_1 cds 921588 921902 - GCA000560365_00887 hypothetical protein RefSeq:WP_000274029.1, SO:0001217, UniParc:UPI0000054731, UniRef:UniRef100_Q2FZY1, UniRef:UniRef50_Q2FZY1, UniRef:UniRef90_Q2FZY1 contig_1 cds 922267 923307 + GCA000560365_00888 corB CNNM transmembrane domain-containing protein COG:COG4536, COG:P, KEGG:K03699, RefSeq:WP_000582332.1, SO:0001217, UniParc:UPI00000D9D2D, UniRef:UniRef100_Q2FZY0, UniRef:UniRef50_K0J4R5, UniRef:UniRef90_Q2FZY0 contig_1 cds 923321 924388 + GCA000560365_00889 yrpB putative nitronate monooxygenase COG:COG2070, COG:R, EC:1.13.12.-, GO:0000166, GO:0009636, GO:0018580, RefSeq:WP_000267247.1, SO:0001217, UniParc:UPI00003DECD4, UniRef:UniRef100_Q2FZX9, UniRef:UniRef50_Q2FZX9, UniRef:UniRef90_Q2FZX9 contig_1 cds 924601 925449 + GCA000560365_00890 yecE Cytosolic protein COG:COG1801, COG:R, RefSeq:WP_000608129.1, SO:0001217, UniParc:UPI00000D77D2, UniRef:UniRef100_Q2FZX7, UniRef:UniRef50_A0A0A8JCS6, UniRef:UniRef90_A0A7U7PXU7 contig_1 cds 925462 926289 + GCA000560365_00891 tauE putative membrane transporter protein COG:COG0730, COG:P, RefSeq:WP_000927632.1, SO:0001217, UniParc:UPI000005472B, UniRef:UniRef100_Q2FZX6, UniRef:UniRef50_A0A7U7PY32, UniRef:UniRef90_A0A7U7PY32 contig_1 cds 926316 927635 + GCA000560365_00892 ushA UDP-sugar hydrolase 5-nucleotidase COG:COG0737, COG:FV, RefSeq:WP_001241217.1, SO:0001217, UniParc:UPI0000696BF5, UniRef:UniRef100_A0A266CWT1, UniRef:UniRef50_A0A2I7Y753, UniRef:UniRef90_A0A2I7Y753 contig_1 cds 927719 928636 + GCA000560365_00893 lipA lipoyl synthase COG:COG0320, COG:H, EC:2.8.1.8, GO:0005737, GO:0009107, GO:0016992, GO:0046872, GO:0051539, GO:1904047, KEGG:K03644, RefSeq:WP_000201875.1, SO:0001217, UniParc:UPI000012E6DB, UniRef:UniRef100_Q2FZX4, UniRef:UniRef50_Q2FZX4, UniRef:UniRef90_Q2FZX4 contig_1 cds 928766 929149 + GCA000560365_00894 yutD DUF1027 domain-containing protein COG:COG4470, COG:S, RefSeq:WP_000598444.1, SO:0001217, UniParc:UPI00000D76FB, UniRef:UniRef100_Q2FZX3, UniRef:UniRef50_S2XM05, UniRef:UniRef90_Q2FZX3 contig_1 cds 929228 929494 - GCA000560365_00895 Cytosolic protein RefSeq:WP_000566649.1, SO:0001217, UniParc:UPI0000054726, UniRef:UniRef100_Q2FZX2, UniRef:UniRef50_Q2FZX2, UniRef:UniRef90_Q2FZX2 contig_1 cds 929592 930026 + GCA000560365_00896 yutE DUF86 domain-containing protein COG:COG2445, COG:R, RefSeq:WP_000273981.1, SO:0001217, UniParc:UPI00000D9D30, UniRef:UniRef100_A0A0E7MS50, UniRef:UniRef50_A0A077UTM6, UniRef:UniRef90_A0A077UTM6 contig_1 cds 930026 930805 + GCA000560365_00897 nagD Acid sugar phosphatase COG:COG0647, COG:F, EC:3.1.3.-, GO:0005737, GO:0016791, GO:0046872, RefSeq:WP_000816184.1, SO:0001217, UniParc:UPI0000054724, UniRef:UniRef100_Q2FZX0, UniRef:UniRef50_Q2FZX0, UniRef:UniRef90_Q2FZX0 contig_1 cds 930838 931797 + GCA000560365_00898 ldhA Glyoxylate reductase COG:CHR, COG:COG1052, RefSeq:WP_000239131.1, SO:0001217, UniParc:UPI00000CAD05, UniRef:UniRef100_Q2FZW9, UniRef:UniRef50_A0A1W7ABE9, UniRef:UniRef90_A0A0U1MIE0 contig_1 cds 932209 932361 + GCA000560365_00899 dltX Teichoic acid D-Ala incorporation-associated protein DltX RefSeq:WP_000837752.1, SO:0001217, UniParc:UPI00000D78B3, UniRef:UniRef100_Q2FZW7, UniRef:UniRef50_Q2FZW7, UniRef:UniRef90_Q2FZW7 contig_1 cds 932377 933834 + GCA000560365_00900 dltA D-alanine--poly(phosphoribitol) ligase subunit DltA COG:COG1020, COG:Q, EC:6.1.1.13, EC:6.2.1.54, GO:0005524, GO:0005737, GO:0019350, GO:0047473, GO:0070395, RefSeq:WP_000129653.1, SO:0001217, UniParc:UPI0000054720, UniRef:UniRef100_Q2FZW6, UniRef:UniRef50_P68876, UniRef:UniRef90_P68876 contig_1 cds 933831 935045 + GCA000560365_00901 dltB PG:teichoic acid D-alanyltransferase DltB BlastRules:WP_000613541, COG:COG1696, COG:M, GO:0016746, GO:0070395, KEGG:K03739, RefSeq:WP_000613541.1, SO:0001217, UniParc:UPI000005471F, UniRef:UniRef100_Q2FZW5, UniRef:UniRef50_B9EAK7, UniRef:UniRef90_A0A7U7JTN1 contig_1 cds 935063 935299 + GCA000560365_00902 dltC D-alanine--poly(phosphoribitol) ligase subunit 2 COG:COG0236, COG:I, EC:6.1.1.13, GO:0005737, GO:0019350, GO:0036370, GO:0070395, GO:0071555, RefSeq:WP_000395692.1, SO:0001217, UniParc:UPI000005471E, UniRef:UniRef100_Q2FZW4, UniRef:UniRef50_P39579, UniRef:UniRef90_Q2FZW4 contig_1 cds 935296 936471 + GCA000560365_00903 dltD D-alanyl-lipoteichoic acid biosynthesis protein DltD COG:COG3966, COG:M, GO:0005886, GO:0070394, GO:0070395, KEGG:K03740, RefSeq:WP_000769417.1, SO:0001217, UniParc:UPI0000696BF6, UniRef:UniRef100_A0A0E8G8K9, UniRef:UniRef50_Q2FZW3, UniRef:UniRef90_Q2FZW3 contig_1 cds 936734 936976 - GCA000560365_00904 nifU NIF system FeS cluster assembly NifU C-terminal domain-containing protein COG:COG0694, COG:O, RefSeq:WP_001141883.1, SO:0001217, UniParc:UPI000005471B, UniRef:UniRef100_Q2FZW2, UniRef:UniRef50_I0JQ31, UniRef:UniRef90_Q2FZW2 contig_1 cds 937077 937400 + GCA000560365_00905 yuzD Disulfide oxidoreductase COG:COG4837, COG:O, RefSeq:WP_000401414.1, SO:0001217, UniParc:UPI00000D9D32, UniRef:UniRef100_Q2FZW1, UniRef:UniRef50_A0A0H3JTK4, UniRef:UniRef90_A0A0H3JTK4 contig_1 cds 937459 938523 - GCA000560365_00906 ndh Type II NADH:quinone oxidoreductase COG:C, COG:COG1252, RefSeq:WP_000794020.1, SO:0001217, UniParc:UPI0000054719, UniRef:UniRef100_Q2FZW0, UniRef:UniRef50_A0A239ZU84, UniRef:UniRef90_A0A077UJH8 contig_1 cds 938840 939076 + GCA000560365_00907 yuzB UPF0349 protein SACOL0942 COG:COG4844, COG:S, RefSeq:WP_001068337.1, SO:0001217, UniParc:UPI0000054718, UniRef:UniRef100_Q2FZV9, UniRef:UniRef50_A4ISE9, UniRef:UniRef90_Q2FZV9 contig_1 cds 939089 939448 + GCA000560365_00908 iscA FeS cluster biogenesis domain-containing protein COG:COG0316, COG:O, RefSeq:WP_001143497.1, SO:0001217, UniParc:UPI0000054717, UniRef:UniRef100_Q2FZV8, UniRef:UniRef50_A0A810E529, UniRef:UniRef90_G5JHW3 contig_1 cds 939902 941110 + GCA000560365_00909 ndh Type II NADH:quinone oxidoreductase COG:C, COG:COG1252, EC:1.6.5.9, GO:0003955, GO:0005886, GO:0019646, GO:0050136, RefSeq:WP_000046076.1, SO:0001217, UniParc:UPI0000054716, UniRef:UniRef100_Q2FZV7, UniRef:UniRef50_Q2FZV7, UniRef:UniRef90_Q2FZV7 contig_1 cds 941241 942716 + GCA000560365_00910 pepB Leucyl aminopeptidase family protein COG:COG0260, COG:E, RefSeq:WP_001009697.1, SO:0001217, UniParc:UPI00000D9D35, UniRef:UniRef100_X5EH11, UniRef:UniRef50_B9DIX2, UniRef:UniRef90_A0A0U1MHC9 contig_1 cds 943127 944443 + GCA000560365_00911 yuiF Na+/H+ antiporter family protein COG:COG2056, COG:E, KEGG:K07084, RefSeq:WP_000606324.1, SO:0001217, UniParc:UPI00000D771F, UniRef:UniRef100_Q2FZV5, UniRef:UniRef50_Q2FZV5, UniRef:UniRef90_Q2FZV5 contig_1 cds 944462 944836 + GCA000560365_00912 paaI ComA operon protein 2 COG:COG2050, COG:Q, RefSeq:WP_000149295.1, SO:0001217, UniParc:UPI0000052293, UniRef:UniRef100_Q2FZV4, UniRef:UniRef50_A0A090LQF4, UniRef:UniRef90_A0A090LQF4 contig_1 cds 944892 946046 - GCA000560365_00913 ndh FAD/NAD(P)-binding domain-containing protein COG:C, COG:COG1252, RefSeq:WP_000558769.1, SO:0001217, UniParc:UPI0000054209, UniRef:UniRef100_Q2G2I0, UniRef:UniRef50_Q2G2I0, UniRef:UniRef90_Q2G2I0 contig_1 cds 946295 946651 - GCA000560365_00914 mnhG1 Na+/H+ antiporter Mnh1 subunit G BlastRules:WP_000590451, COG:COG1320, COG:P, GO:0005886, GO:0015385, RefSeq:WP_000590451.1, SO:0001217, UniParc:UPI00000D7713, UniRef:UniRef100_Q2G2H9, UniRef:UniRef50_Q2G2H9, UniRef:UniRef90_Q2G2H9 contig_1 cds 946629 946922 - GCA000560365_00915 mnhF1 Na+/H+ antiporter Mnh1 subunit F BlastRules:WP_001016306, COG:COG2212, COG:P, GO:0005886, GO:0015385, RefSeq:WP_001016306.1, SO:0001217, UniParc:UPI00000522D3, UniRef:UniRef100_Q2G2H6, UniRef:UniRef50_Q2G2H6, UniRef:UniRef90_Q2G2H6 contig_1 cds 946922 947401 - GCA000560365_00916 mnhE1 Na+/H+ antiporter Mnh1 subunit E BlastRules:WP_000290674, COG:COG1863, COG:P, GO:0005886, GO:0006814, GO:0008324, GO:0015297, GO:1902600, RefSeq:WP_000290674.1, SO:0001217, UniParc:UPI0000054228, UniRef:UniRef100_Q2G2H8, UniRef:UniRef50_Q2G2H8, UniRef:UniRef90_Q2G2H8 contig_1 cds 947403 948899 - GCA000560365_00917 mnhD1 Na+/H+ antiporter Mnh1 subunit D BlastRules:WP_000573077, COG:COG0651, COG:CP, GO:0005886, GO:0006814, GO:0008137, GO:0015297, GO:0015386, GO:0042773, RefSeq:WP_000573079.1, SO:0001217, UniParc:UPI0000696BF7, UniRef:UniRef100_Q2FIC6, UniRef:UniRef50_Q2G2H7, UniRef:UniRef90_Q2G2H7 contig_1 cds 948892 949233 - GCA000560365_00918 mnhC1 Na+/H+ antiporter Mnh1 subunit C BlastRules:WP_000402803, COG:COG1006, COG:P, GO:0005886, GO:0006812, GO:0006814, GO:0008324, GO:0015297, GO:1902600, RefSeq:WP_000402803.1, SO:0001217, UniParc:UPI00000D765F, UniRef:UniRef100_Q2FZV3, UniRef:UniRef50_O05260, UniRef:UniRef90_Q2FZV3 contig_1 cds 949233 949661 - GCA000560365_00919 mnhB1 Na+/H+ antiporter Mnh1 subunit B BlastRules:WP_001081626, COG:COG2111, COG:P, GO:0005886, GO:0006814, GO:0008324, GO:0015297, GO:1902600, RefSeq:WP_001081626.1, SO:0001217, UniParc:UPI0000054246, UniRef:UniRef100_Q2FZV2, UniRef:UniRef50_Q2FZV2, UniRef:UniRef90_Q2FZV2 contig_1 cds 949654 952059 - GCA000560365_00920 mnhA1 Na+/H+ antiporter Mnh1 subunit A BlastRules:WP_042727539, COG:COG2111, COG:P, GO:0005886, GO:0006814, GO:0015297, GO:0051139, GO:0098662, GO:1902600, RefSeq:WP_000054609.1, SO:0001217, UniParc:UPI00000D9D38, UniRef:UniRef100_Q2FZV1, UniRef:UniRef50_Q9K2S2, UniRef:UniRef90_Q9ZNG6 contig_1 cds 952190 952573 - GCA000560365_00921 Kinase associated B family protein RefSeq:WP_000781156.1, SO:0001217, UniParc:UPI000005425C, UniRef:UniRef100_Q2FZV0, UniRef:UniRef50_A0A0M2NU22, UniRef:UniRef90_A0A380DMN1 contig_1 cds 952637 953230 + GCA000560365_00922 ppiB Putative peptidyl-prolyl cis-trans isomerase COG:COG0652, COG:O, EC:5.2.1.8, GO:0140839, GO:0140840, RefSeq:WP_000035058.1, SO:0001217, UniParc:UPI000005425D, UniRef:UniRef100_Q2FZU9, UniRef:UniRef50_Q2FZU9, UniRef:UniRef90_Q2FZU9 contig_1 cds 953646 954023 + GCA000560365_00923 ygs S1 domain-containing post-transcriptional regulator Ygs COG:COG1098, COG:R, RefSeq:WP_001067294.1, SO:0001217, UniParc:UPI00000D9D39, UniRef:UniRef100_A0A7Z7QY58, UniRef:UniRef50_B9DIU9, UniRef:UniRef90_A0A1L8Y4M2 contig_1 cds 954385 955512 + GCA000560365_00924 fadH Putative NADH-dependent flavin oxidoreductase YqiG COG:C, COG:COG1902, RefSeq:WP_000838037.1, SO:0001217, UniParc:UPI0000054272, UniRef:UniRef100_Q2FZU7, UniRef:UniRef50_S2YL03, UniRef:UniRef90_A0A0U1MHF9 contig_1 cds 955820 957010 + GCA000560365_00925 rocD ornithine--oxo-acid transaminase COG:COG4992, COG:E, EC:2.6.1.13, GO:0004587, GO:0005737, GO:0030170, GO:0042802, GO:0055129, RefSeq:WP_000167314.1, SO:0001217, UniParc:UPI00000D76C6, UniRef:UniRef100_Q5HHC8, UniRef:UniRef50_P38021, UniRef:UniRef90_Q8CT82 contig_1 cds 957119 958363 + GCA000560365_00926 gluD NAD-specific glutamate dehydrogenase COG:COG0334, COG:E, EC:1.4.1.2, GO:0004352, GO:0006520, GO:0006538, RefSeq:WP_000138486.1, SO:0001217, UniParc:UPI0000696BFA, UniRef:UniRef100_A0A1S5ZSF2, UniRef:UniRef50_P39633, UniRef:UniRef90_Q5HHC7 contig_1 ncRNA 958502 958779 - GCA000560365_00927 S35 Staphylococcus sRNA 35 (srn_0335) RFAM:RF02894, SO:0000655 contig_1 cds 958866 959795 - GCA000560365_00928 ugpQ GP-PDE domain-containing protein COG:COG0584, COG:I, RefSeq:WP_000185319.1, SO:0001217, UniParc:UPI00000542A2, UniRef:UniRef100_Q2FZU3, UniRef:UniRef50_A0A380GA35, UniRef:UniRef90_Q2FZU3 contig_1 cds 960037 961416 - GCA000560365_00929 argH argininosuccinate lyase COG:COG0165, COG:E, EC:4.3.2.1, GO:0004056, GO:0005829, GO:0006526, GO:0042450, KEGG:K01755, RefSeq:WP_000066062.1, SO:0001217, UniParc:UPI0000696BFB, UniRef:UniRef100_Q2FIB5, UniRef:UniRef50_P73257, UniRef:UniRef90_Q2FZU2 contig_1 cds 961406 962611 - GCA000560365_00930 argG argininosuccinate synthase COG:COG0137, COG:E, EC:6.3.4.5, GO:0000050, GO:0000053, GO:0004055, GO:0005524, GO:0005737, GO:0006526, KEGG:K01940, RefSeq:WP_000660045.1, SO:0001217, UniParc:UPI000012619A, UniRef:UniRef100_Q2FZU1, UniRef:UniRef50_A0RJM4, UniRef:UniRef90_Q2FZU1 contig_1 cds 962962 964293 + GCA000560365_00931 pgi glucose-6-phosphate isomerase EC:5.3.1.9, GO:0004347, GO:0005829, GO:0006094, GO:0006096, GO:0048029, GO:0051156, GO:0097367, RefSeq:WP_000148855.1, SO:0001217, UniParc:UPI000012AF6E, UniRef:UniRef100_Q2FIB3, UniRef:UniRef50_P13376, UniRef:UniRef90_Q2FIB3 contig_1 cds 964618 965193 + GCA000560365_00932 tVP38 Putative undecaprenyl phosphate transporter SAOUHSC_00901 COG:COG0398, COG:S, GO:0005886, RefSeq:WP_000007967.1, SO:0001217, UniParc:UPI00000D781A, UniRef:UniRef100_Q2FZT9, UniRef:UniRef50_Q2FZT9, UniRef:UniRef90_Q2FZT9 contig_1 cds 965198 965722 + GCA000560365_00933 lepB signal peptidase I COG:COG0681, COG:U, EC:3.4.21.89, GO:0004252, GO:0005886, GO:0006465, GO:0009306, GO:0016020, KEGG:K03100, RefSeq:WP_000758215.1, SO:0001217, UniParc:UPI00004B5B80, UniRef:UniRef100_Q5HHC0, UniRef:UniRef50_P0A063, UniRef:UniRef90_P0A063 contig_1 cds 965738 966313 + GCA000560365_00934 lepB signal peptidase I COG:COG0681, COG:U, EC:3.4.21.89, GO:0004252, GO:0005886, GO:0006465, GO:0009306, GO:0016020, KEGG:K03100, RefSeq:WP_000711486.1, SO:0001217, UniParc:UPI0000627620, UniRef:UniRef100_Q5HHB9, UniRef:UniRef50_Q5HHB9, UniRef:UniRef90_Q5HHB9 contig_1 cds 966473 969949 + GCA000560365_00935 addB helicase-exonuclease AddAB subunit AddB COG:COG3857, COG:L, EC:3.1.-.-, EC:3.6.4.12, GO:0000724, GO:0003690, GO:0004527, GO:0005524, GO:0008409, GO:0009378, GO:0036121, GO:0046872, GO:0051539, GO:0061749, GO:1990518, RefSeq:WP_000172342.1, SO:0001217, UniParc:UPI0000054B28, UniRef:UniRef100_Q2FZT6, UniRef:UniRef50_Q2FZT6, UniRef:UniRef90_Q2FZT6 contig_1 cds 969950 973603 + GCA000560365_00936 addA helicase-exonuclease AddAB subunit AddA COG:COG1074, COG:L, EC:3.1.-.-, EC:3.6.4.12, EC:5.6.2.4, GO:0000724, GO:0003678, GO:0003689, GO:0003690, GO:0005524, GO:0005829, GO:0006302, GO:0008408, GO:0009378, GO:0016818, GO:0016853, GO:0016887, GO:0033202, GO:0036121, GO:0061749, GO:0061775, GO:0140584, GO:0140665, GO:0140849, GO:1990518, KEGG:K16898, RefSeq:WP_000154914.1, SO:0001217, UniParc:UPI0000696BFD, UniRef:UniRef100_Q2FIA8, UniRef:UniRef50_Q4L4Y3, UniRef:UniRef90_Q2FZT5 contig_1 cds 973769 974671 + GCA000560365_00937 ycgM putative protein SAS0838 COG:COG0179, COG:Q, GO:0018773, GO:0046872, RefSeq:WP_000670752.1, SO:0001217, UniParc:UPI0000054B26, UniRef:UniRef100_Q2FZT4, UniRef:UniRef50_Q2FZT4, UniRef:UniRef90_Q2FZT4 contig_1 cds 975000 975389 + GCA000560365_00938 UPF0344 protein MW0851 GO:0005886, RefSeq:WP_000902817.1, SO:0001217, UniParc:UPI00004B5B83, UniRef:UniRef100_Q2FZT3, UniRef:UniRef50_Q2FZT3, UniRef:UniRef90_Q2FZT3 contig_1 cds 975560 976876 - GCA000560365_00939 cdr CoA-disulfide reductase COG:COG0446, COG:I, EC:1.8.1.14, GO:0003756, GO:0016491, GO:0045454, GO:0050451, GO:0050660, GO:0050661, KEGG:K08255, RefSeq:WP_001124525.1, SO:0001217, UniParc:UPI0000054B23, UniRef:UniRef100_Q2FIA5, UniRef:UniRef50_O52582, UniRef:UniRef90_O52582 contig_1 cds 976928 977752 - GCA000560365_00940 cof Cof-type HAD-IIB family hydrolase COG:COG0561, COG:HR, EC:3.1.3.104, KEGG:K21064, RefSeq:WP_001182436.1, SO:0001217, UniParc:UPI000005227E, UniRef:UniRef100_Q2FZT1, UniRef:UniRef50_P70947, UniRef:UniRef90_Q2FZT1 contig_1 cds 977866 978174 + GCA000560365_00941 sufT Fe-S protein maturation auxiliary factor SufT COG:COG2151, COG:O, RefSeq:WP_000390575.1, SO:0001217, UniParc:UPI00000D76BA, UniRef:UniRef100_A0A0H2XI17, UniRef:UniRef50_A0A0H2XI17, UniRef:UniRef90_A0A0H2XI17 contig_1 cds 978721 980535 + GCA000560365_00942 oafA Putative O-acetyltransferase MW0856 COG:COG1835, COG:M, EC:2.3.1.-, GO:0005886, GO:0009103, GO:0016747, RefSeq:WP_001044214.1, SO:0001217, UniParc:UPI0000054B21, UniRef:UniRef100_Q5HHB1, UniRef:UniRef50_Q2FV54, UniRef:UniRef90_Q99VB6 contig_1 cds 980738 983347 + GCA000560365_00943 clpB ATP-dependent chaperone ClpB COG:COG0542, COG:O, GO:0005524, GO:0005737, GO:0009408, GO:0016887, GO:0034605, GO:0042026, RefSeq:WP_000353955.1, SO:0001217, UniParc:UPI00003B1A86, UniRef:UniRef100_Q5HHB0, UniRef:UniRef50_Q8CPT5, UniRef:UniRef90_Q99VB5 contig_1 cds 983406 984275 - GCA000560365_00944 lysR HTH lysR-type domain-containing protein COG:COG0583, COG:K, RefSeq:WP_001047066.1, SO:0001217, UniParc:UPI0000054B1F, UniRef:UniRef100_Q2FZS7, UniRef:UniRef50_Q2FZS7, UniRef:UniRef90_Q2FZS7 contig_1 cds 984385 985530 + GCA000560365_00945 leuA 2-isopropylmalate synthase COG:COG0119, COG:E, RefSeq:WP_000619366.1, SO:0001217, UniParc:UPI0000696BFF, UniRef:UniRef100_A0A0E8GC24, UniRef:UniRef50_A0A4T9Z9Z3, UniRef:UniRef90_A0A4T9Z9Z3 contig_1 cds 985514 986155 + GCA000560365_00946 tsaC L-threonylcarbamoyladenylate synthase COG:COG0009, COG:J, EC:2.7.7.87, GO:0003725, GO:0006400, GO:0061710, RefSeq:WP_000404422.1, SO:0001217, UniParc:UPI0000054B1D, UniRef:UniRef100_Q2FZS5, UniRef:UniRef50_A0A7Z7W199, UniRef:UniRef90_A0A7Z7W199 contig_1 cds 986148 987266 + GCA000560365_00947 MFS transporter RefSeq:WP_001037436.1, SO:0001217, UniParc:UPI0000054B1C, UniRef:UniRef100_Q2FZS4, UniRef:UniRef50_Q2FZS4, UniRef:UniRef90_Q2FZS4 contig_1 cds 987250 987765 + GCA000560365_00948 ybhB YbhB/YbcL family Raf kinase inhibitor-like protein COG:COG1881, COG:R, RefSeq:WP_000695342.1, SO:0001217, UniParc:UPI0000054B1B, UniRef:UniRef100_Q2FZS3, UniRef:UniRef50_Q2FZS3, UniRef:UniRef90_Q2FZS3 contig_1 cds 988076 988510 + GCA000560365_00949 Cell surface like-protein Map-w KEGG:K14204, RefSeq:WP_000769689.1, SO:0001217, UniParc:UPI0000054B19, UniRef:UniRef100_Q2FZS2, UniRef:UniRef50_A0A224B134, UniRef:UniRef90_A0AAE8P9X9 contig_1 cds 988767 988952 - GCA000560365_00950 DUF2929 domain-containing protein RefSeq:WP_000682089.1, SO:0001217, UniParc:UPI0000054B18, UniRef:UniRef100_Q2FZS1, UniRef:UniRef50_Q2FZS1, UniRef:UniRef90_Q2FZS1 contig_1 cds 989247 990188 + GCA000560365_00951 fabH Beta-ketoacyl-[acyl-carrier-protein] synthase III COG:COG0332, COG:I, EC:2.3.1.180, GO:0004315, GO:0005737, GO:0006633, GO:0033818, RefSeq:WP_001100525.1, SO:0001217, UniParc:UPI0000054B17, UniRef:UniRef100_Q2FZS0, UniRef:UniRef50_P68795, UniRef:UniRef90_P68795 contig_1 cds 990200 991444 + GCA000560365_00952 fabF beta-ketoacyl-ACP synthase II COG:COG0304, COG:IQ, EC:2.3.1.179, GO:0004315, GO:0005829, GO:0006633, RefSeq:WP_000081237.1, SO:0001217, UniParc:UPI0000696C00, UniRef:UniRef100_A0A0E8G9V2, UniRef:UniRef50_O34340, UniRef:UniRef90_Q5HHA1 contig_1 cds 991499 991870 - GCA000560365_00953 DUF3899 domain-containing protein RefSeq:WP_000915155.1, SO:0001217, UniParc:UPI0000054B15, UniRef:UniRef100_Q2FZR8, UniRef:UniRef50_Q2FZR8, UniRef:UniRef90_Q2FZR8 contig_1 cds 992113 993039 + GCA000560365_00954 opp3b oligopeptide ABC transporter permease COG:COG0601, COG:EP, GO:0043190, GO:0140359, RefSeq:WP_000521533.1, SO:0001217, UniParc:UPI0000054B14, UniRef:UniRef100_Q2FZR7, UniRef:UniRef50_Q2FZR7, UniRef:UniRef90_Q2FZR7 contig_1 cds 993039 994109 + GCA000560365_00955 opp3C oligopeptide ABC transporter permease COG:COG1173, COG:EP, GO:0043190, GO:0140359, RefSeq:WP_000829632.1, SO:0001217, UniParc:UPI0000054B13, UniRef:UniRef100_Q2FZR6, UniRef:UniRef50_B9DIT6, UniRef:UniRef90_Q2FZR6 contig_1 cds 994126 995208 + GCA000560365_00956 dppD ABC transporter domain-containing protein COG:COG0444, COG:EP, RefSeq:WP_000140050.1, SO:0001217, UniParc:UPI0000054B12, UniRef:UniRef100_Q2FZR5, UniRef:UniRef50_A0A1E9VQX6, UniRef:UniRef90_Q2FZR5 contig_1 cds 995198 996139 + GCA000560365_00957 oppF Oligopeptide transport ATP-binding protein oppF COG:COG0444, COG:EP, RefSeq:WP_000786734.1, SO:0001217, UniParc:UPI0000054B11, UniRef:UniRef100_Q2FZR4, UniRef:UniRef50_A0A091C226, UniRef:UniRef90_A0A2X2MUC1 contig_1 cds 996158 997813 + GCA000560365_00958 oppA Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein oppA COG:COG4166, COG:E, KEGG:K15580, RefSeq:WP_000197019.1, SO:0001217, UniParc:UPI0000054B10, UniRef:UniRef100_Q2FZR3, UniRef:UniRef50_S2XM61, UniRef:UniRef90_A0A166IYH7 contig_1 cds 998025 999740 + GCA000560365_00959 opp4A oligopeptide ABC transporter substrate-binding protein COG:COG0747, COG:E, GO:0043190, GO:0140359, RefSeq:WP_000517187.1, SO:0001217, UniParc:UPI00004B5B89, UniRef:UniRef100_A0A0E7NMJ6, UniRef:UniRef50_B9DPB0, UniRef:UniRef90_A0A0E7NMJ6 contig_1 cds 999791 1000777 + GCA000560365_00960 dppD Oligopeptide ABC transporter (ATP-binding protein) COG:COG0444, COG:EP, RefSeq:WP_001067049.1, SO:0001217, UniParc:UPI0000696C01, UniRef:UniRef100_A0A5A8VG60, UniRef:UniRef50_A0A8T7JET3, UniRef:UniRef90_A0A0U1MIN3 contig_1 cds 1000780 1001760 + GCA000560365_00961 dppD Dipeptide ABC transporter ATP-binding protein COG:COG0444, COG:EP, RefSeq:WP_000427770.1, SO:0001217, UniParc:UPI0000054B0C, UniRef:UniRef100_Q2FZR0, UniRef:UniRef50_A0A150KNE3, UniRef:UniRef90_A0A389Q283 contig_1 cds 1001753 1002715 + GCA000560365_00962 opp4B oligopeptide ABC transporter permease COG:COG0601, COG:EP, GO:0043190, GO:0140359, RefSeq:WP_000593417.1, SO:0001217, UniParc:UPI0000054B0B, UniRef:UniRef100_Q2FZQ9, UniRef:UniRef50_S2XU22, UniRef:UniRef90_A0A0U1MIX6 contig_1 cds 1002727 1003608 + GCA000560365_00963 opp4C oligopeptide ABC transporter permease COG:COG1173, COG:EP, GO:0043190, GO:0140359, RefSeq:WP_001180262.1, SO:0001217, UniParc:UPI0000054B0A, UniRef:UniRef100_Q2FZQ8, UniRef:UniRef50_A0A075RFR8, UniRef:UniRef90_A0A8G2HYR2 contig_1 cds 1003650 1004639 - GCA000560365_00964 trpS tryptophan--tRNA ligase COG:COG0180, COG:J, EC:6.1.1.2, GO:0000166, GO:0004830, GO:0005524, GO:0005829, GO:0006436, RefSeq:WP_000448934.1, SO:0001217, UniParc:UPI000002E8EF, UniRef:UniRef100_Q5HH88, UniRef:UniRef50_P21656, UniRef:UniRef90_Q5HH88 contig_1 cds 1004934 1005329 + GCA000560365_00965 spxA transcriptional regulator SpxA COG:COG1393, COG:P, GO:0005737, GO:0045892, KEGG:K16509, RefSeq:WP_000258003.1, SO:0001217, UniParc:UPI00000D77A6, UniRef:UniRef100_Q2G1U6, UniRef:UniRef50_O31602, UniRef:UniRef90_Q2G1U6 contig_1 cds 1005700 1006419 + GCA000560365_00966 mecA adaptor protein MecA COG:COG4862, COG:KTN, GO:0030674, RefSeq:WP_001217730.1, SO:0001217, UniParc:UPI0000054B08, UniRef:UniRef100_Q2G1U5, UniRef:UniRef50_P60184, UniRef:UniRef90_P60184 contig_1 cds 1006540 1006797 + GCA000560365_00967 coiA Competence protein CoiA COG:COG4469, COG:R, SO:0001217, UniParc:UPI0000696C02, UniRef:UniRef100_A0A0E8G9A9, UniRef:UniRef50_Q2G1U4, UniRef:UniRef90_Q2G1U4 contig_1 cds 1006911 1007525 + GCA000560365_00968 coiA Competence protein CoiA COG:COG4469, COG:R, SO:0001217, UniParc:UPI000169900F, UniRef:UniRef100_Q2G1U4, UniRef:UniRef50_Q2G1U4, UniRef:UniRef90_Q2G1U4 contig_1 cds 1007573 1009381 + GCA000560365_00969 pepF oligoendopeptidase F COG:COG1164, COG:E, EC:3.4.24.-, GO:0004222, GO:0006508, KEGG:K08602, RefSeq:WP_000082731.1, SO:0001217, UniParc:UPI0000054B06, UniRef:UniRef100_Q2G1U3, UniRef:UniRef50_O31605, UniRef:UniRef90_A0A0D1I4D2 contig_1 ncRNA 1009481 1009578 + GCA000560365_00970 rsaE RNA Staph. aureus E (RoxS) RFAM:RF01820, SO:0000655 contig_1 ncRNA 1009544 1009662 + GCA000560365_00971 rsaF RNA Staph. aureus F RFAM:RF01858, SO:0000655 contig_1 cds 1009841 1010647 - GCA000560365_00972 yjbH protease adaptor protein YjbH BlastRules:WP_000896697, BlastRules:WP_014614367, COG:COG2761, COG:O, GO:0005737, RefSeq:WP_000896697.1, SO:0001217, UniParc:UPI0000054B04, UniRef:UniRef100_Q2G203, UniRef:UniRef50_Q2G203, UniRef:UniRef90_Q2G203 contig_1 cds 1010670 1011035 - GCA000560365_00973 yjbI truncated hemoglobin YjbI BlastRules:WP_000214067, BlastRules:WP_019167281, RefSeq:WP_000214075.1, SO:0001217, UniParc:UPI0000696C04, UniRef:UniRef100_A0A1S5YUB0, UniRef:UniRef50_Q2G202, UniRef:UniRef90_Q2G202 contig_1 cds 1011139 1011732 - GCA000560365_00974 yjbK CYTH domain-containing protein COG:COG4116, COG:R, RefSeq:WP_000224622.1, SO:0001217, UniParc:UPI0000054B02, UniRef:UniRef100_Q2G201, UniRef:UniRef50_Q2G201, UniRef:UniRef90_Q2G201 contig_1 cds 1011918 1012265 + GCA000560365_00975 UPF0738 protein SAS0874 RefSeq:WP_001242102.1, SO:0001217, UniParc:UPI00000D9D4A, UniRef:UniRef100_Q2G200, UniRef:UniRef50_Q2G200, UniRef:UniRef90_Q2G200 contig_1 cds 1012282 1012917 + GCA000560365_00976 yjbM GTP pyrophosphokinase COG:COG2357, COG:FT, RefSeq:WP_001077683.1, SO:0001217, UniParc:UPI0000054B00, UniRef:UniRef100_Q2G204, UniRef:UniRef50_O31611, UniRef:UniRef90_A0A380G3W5 contig_1 cds 1012934 1013743 + GCA000560365_00977 nadK NAD kinase COG:COG0061, COG:H, EC:2.7.1.23, GO:0003951, GO:0005524, GO:0005737, GO:0006741, GO:0019674, GO:0046872, GO:0051287, KEGG:K00858, RefSeq:WP_001270834.1, SO:0001217, UniParc:UPI0000054AFF, UniRef:UniRef100_Q2G1Z9, UniRef:UniRef50_Q8Y8D7, UniRef:UniRef90_Q2G1Z9 contig_1 cds 1013740 1014594 + GCA000560365_00978 rluA Ribosomal large subunit pseudouridine synthase D COG:COG0564, COG:J, RefSeq:WP_000669939.1, SO:0001217, UniParc:UPI0000054AFE, UniRef:UniRef100_Q2FZQ6, UniRef:UniRef50_A0A380CJ34, UniRef:UniRef90_A0A390AE29 contig_1 cds 1014615 1016000 + GCA000560365_00979 mgtE magnesium transporter COG:COG2239, COG:P, GO:0015095, GO:0015693, GO:0016020, RefSeq:WP_000062417.1, SO:0001217, UniParc:UPI0000054AFD, UniRef:UniRef100_Q2FZQ5, UniRef:UniRef50_A0A2T4SE99, UniRef:UniRef90_A0A0D1GXI3 contig_1 cds 1016010 1017854 + GCA000560365_00980 trkA Sodium:proton antiporter COG:COG0569, COG:PT, RefSeq:WP_000395153.1, SO:0001217, UniParc:UPI0000054AFC, UniRef:UniRef100_Q2FZQ4, UniRef:UniRef50_O31615, UniRef:UniRef90_Q2FZQ4 contig_1 cds 1018132 1018902 + GCA000560365_00981 fabI enoyl-ACP reductase FabI COG:COG0623, COG:I, EC:1.3.1.-, EC:1.3.1.39, GO:0004318, GO:0006633, GO:0030497, GO:0042802, GO:0050661, GO:0141148, RefSeq:WP_000933195.1, SO:0001217, UniParc:UPI00000D774F, UniRef:UniRef100_Q6GI75, UniRef:UniRef50_Q2FZQ3, UniRef:UniRef90_Q2FZQ3 contig_1 cds 1019097 1020182 - GCA000560365_00982 perM AI-2E family transporter COG:COG0628, COG:R, RefSeq:WP_000933105.1, SO:0001217, UniParc:UPI0000054AF9, UniRef:UniRef100_Q2FZQ2, UniRef:UniRef50_Q2FZQ2, UniRef:UniRef90_Q2FZQ2 contig_1 cds 1020524 1022092 + GCA000560365_00983 alsT Alanine:cation symporter family protein COG:COG1115, COG:E, KEGG:K03310, RefSeq:WP_000570699.1, SO:0001217, UniParc:UPI00004B5B8C, UniRef:UniRef100_A0A0H3K7V2, UniRef:UniRef50_A0A6N3F963, UniRef:UniRef90_Q2FZQ1 contig_1 cds 1022234 1022992 + GCA000560365_00984 fes Esterase family protein COG:COG2382, COG:P, RefSeq:WP_001288681.1, SO:0001217, UniParc:UPI0000054AF7, UniRef:UniRef100_Q2FZQ0, UniRef:UniRef50_Q2FZQ0, UniRef:UniRef90_Q2FZQ0 contig_1 cds 1023186 1023695 + GCA000560365_00985 thpR Putative phosphoesterase SA0873 COG:COG1514, COG:J, EC:3.1.-.-, GO:0016788, RefSeq:WP_000600392.1, SO:0001217, UniParc:UPI0000054AF6, UniRef:UniRef100_Q2FZP9, UniRef:UniRef50_Q2FZP9, UniRef:UniRef90_Q2FZP9 contig_1 cds 1023808 1024998 - GCA000560365_00986 ltaA lipoteichoic acid biosynthesis MFS flippase LtaA COG:COG2814, COG:G, GO:0005886, GO:0006869, GO:0015297, GO:0070395, GO:0140327, RefSeq:WP_001154222.1, SO:0001217, UniParc:UPI00004B5B8D, UniRef:UniRef100_Q2FZP8, UniRef:UniRef50_Q2FZP8, UniRef:UniRef90_Q2FZP8 contig_1 cds 1024976 1026151 - GCA000560365_00987 ugtP diglucosyl diacylglycerol synthase COG:COG0707, COG:M, EC:2.4.1.315, GO:0005886, GO:0009246, GO:0009247, GO:0047228, GO:0070395, RefSeq:WP_000258650.1, SO:0001217, UniParc:UPI0000054AF4, UniRef:UniRef100_Q2FZP7, UniRef:UniRef50_Q2FZP7, UniRef:UniRef90_Q2FZP7 contig_1 cds 1026584 1028065 + GCA000560365_00988 murE UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase COG:COG0769, COG:M, EC:6.3.2.7, GO:0000287, GO:0005524, GO:0005737, GO:0008360, GO:0009252, GO:0047482, GO:0051301, GO:0071555, KEGG:K01928, RefSeq:WP_000340118.1, SO:0001217, UniParc:UPI00004B5B8E, UniRef:UniRef100_Q2FZP6, UniRef:UniRef50_Q2FZP6, UniRef:UniRef90_Q2FZP6 contig_1 cds 1028058 1028309 + GCA000560365_00989 YueH-like family protein RefSeq:WP_000608862.1, SO:0001217, UniParc:UPI00000CAC3F, UniRef:UniRef100_W8URU9, UniRef:UniRef50_Q2FZP5, UniRef:UniRef90_Q2FZP5 contig_1 cds 1028309 1029871 + GCA000560365_00990 prfC peptide chain release factor 3 COG:COG4108, COG:J, GO:0003924, GO:0005525, GO:0005829, GO:0006415, GO:0006449, GO:0016149, GO:0016150, KEGG:K02837, RefSeq:WP_001049959.1, SO:0001217, UniParc:UPI0000054AF1, UniRef:UniRef100_Q2FZP4, UniRef:UniRef50_Q8Y8C0, UniRef:UniRef90_Q2FZP4 contig_1 ncRNA-region 1029991 1030098 + Manganese Mn2+ riboswitch aptamer (yybP-ykoY) RFAM:RF00080, SO:0000035 contig_1 cds 1030173 1030976 + GCA000560365_00991 terC TerC family protein COG:COG0861, COG:P, RefSeq:WP_000928413.1, SO:0001217, UniParc:UPI00000CABC2, UniRef:UniRef100_Q2FZP3, UniRef:UniRef50_O34997, UniRef:UniRef90_Q2FZP3 contig_1 cds 1031210 1033519 + GCA000560365_00992 degQ Serine protease HtrA-like COG:COG0265, COG:O, EC:3.4.21.-, GO:0004252, GO:0005886, GO:0006508, SO:0001217, UniParc:UPI0000696C06, UniRef:UniRef100_Q2FI55, UniRef:UniRef50_Q2FZP2, UniRef:UniRef90_Q2FZP2 contig_1 cds 1033536 1034894 + GCA000560365_00993 trkG K+-transporting ATPase COG:COG0168, COG:P, RefSeq:WP_031808142.1, SO:0001217, UniParc:UPI00044B74DE, UniRef:UniRef100_UPI00044B74DE, UniRef:UniRef50_O31658, UniRef:UniRef90_A0A7U7JTZ2 contig_1 cds 1035030 1036544 + GCA000560365_00994 ushA 5'-Nucleotidase C-terminal domain-containing protein COG:COG0737, COG:FV, SO:0001217, UniParc:UPI0000054AEC, UniRef:UniRef100_Q2FZP0, UniRef:UniRef50_A0A380G340, UniRef:UniRef90_Q2FZP0 contig_1 tRNA 1036724 1036812 - GCA000560365_00995 trnS tRNA-Ser(gct) SO:0000269 contig_1 tRNA 1036815 1036889 - GCA000560365_00996 trnN tRNA-Asn(gtt) SO:0000257 contig_1 cds 1037031 1037600 - GCA000560365_00997 comK Competence protein ComK COG:COG4903, COG:K, RefSeq:WP_000287265.1, SO:0001217, UniParc:UPI00000D7742, UniRef:UniRef100_Q2FZN9, UniRef:UniRef50_Q2FZN9, UniRef:UniRef90_Q2FZN9 contig_1 cds 1037810 1038028 + GCA000560365_00998 IDEAL domain-containing protein RefSeq:WP_000876826.1, SO:0001217, UniParc:UPI00000D7696, UniRef:UniRef100_Q2FZN8, UniRef:UniRef50_Q2FZN8, UniRef:UniRef90_Q2FZN8 contig_1 cds 1038109 1039095 - GCA000560365_00999 lplA Lipoate--protein ligase 1 COG:COG0095, COG:H, EC:6.3.1.20, GO:0005524, GO:0005737, GO:0009249, GO:0016979, GO:0017118, KEGG:K03800, RefSeq:WP_000668820.1, SO:0001217, UniParc:UPI0000054AE9, UniRef:UniRef100_Q2FZN7, UniRef:UniRef50_O07608, UniRef:UniRef90_A0A0H3JR16 contig_1 cds 1039294 1039470 + GCA000560365_01000 ykvS DUF2187 domain-containing protein COG:COG4873, COG:S, RefSeq:WP_000214898.1, SO:0001217, UniParc:UPI0000054AE8, UniRef:UniRef100_Q2FZN6, UniRef:UniRef50_Q2FZN6, UniRef:UniRef90_Q2FZN6 contig_1 cds 1039485 1040087 + GCA000560365_01001 CPBP family intramembrane metalloprotease RefSeq:WP_001033867.1, SO:0001217, UniParc:UPI0000054AE7, UniRef:UniRef100_Q2FZN5, UniRef:UniRef50_Q2FZN5, UniRef:UniRef90_Q2FZN5 contig_1 ncRNA 1040249 1040431 + GCA000560365_01002 rli28 Listeria sRNA rli28 RFAM:RF01492, SO:0000655 contig_1 sorf 1040388 1040465 + GCA000560365_01003 Holin-like toxin RefSeq:WP_099112139.1, SO:0001217, UniParc:UPI00078C946A, UniRef:UniRef100_Q2FZN4, UniRef:UniRef50_Q2FZN4, UniRef:UniRef90_Q2FZN4 contig_1 cds 1041431 1043395 + GCA000560365_01004 Bacteriocin-associated integral membrane family protein COG:COG4652, COG:S, RefSeq:WP_000870806.1, SO:0001217, UniParc:UPI0000054436, UniRef:UniRef100_Q2FZN2, UniRef:UniRef50_Q2FZN2, UniRef:UniRef90_Q2FZN2 contig_1 cds 1043398 1043718 + GCA000560365_01005 yxeA YxeA family protein COG:COG5294, COG:S, RefSeq:WP_000668623.1, SO:0001217, UniParc:UPI00000543D0, UniRef:UniRef100_Q2FZN1, UniRef:UniRef50_G5JID0, UniRef:UniRef90_Q2FZN1 contig_1 cds 1043715 1044356 + GCA000560365_01006 lolD ABC transporter ATP-binding protein COG:COG1136, COG:M, RefSeq:WP_000571178.1, SO:0001217, UniParc:UPI000005436D, UniRef:UniRef100_Q2FZN0, UniRef:UniRef50_A0A390FES4, UniRef:UniRef90_A0A390FES4 contig_1 cds 1044444 1044689 - GCA000560365_01007 Membrane protein SO:0001217, UniParc:UPI00000D76BD, UniRef:UniRef100_W8U039, UniRef:UniRef50_Q2FZM9, UniRef:UniRef90_Q2FZM9 contig_1 cds 1045013 1045300 + GCA000560365_01008 Phage protein RefSeq:WP_000410720.1, SO:0001217, UniParc:UPI00000542A3, UniRef:UniRef100_Q2FZM8, UniRef:UniRef50_Q2FZM8, UniRef:UniRef90_Q2FZM8 contig_1 cds 1045306 1046787 + GCA000560365_01009 tarM Poly(ribitol-phosphate) alpha-N-acetylglucosaminyltransferase EC:2.4.1.70, GO:0005737, GO:0019350, GO:0047269, GO:0071555, RefSeq:WP_000719184.1, SO:0001217, UniParc:UPI00004B5B95, UniRef:UniRef100_A0A0H2WWV6, UniRef:UniRef50_A0A0H2WWV6, UniRef:UniRef90_A0A0H2WWV6 contig_1 cds 1046876 1047232 - GCA000560365_01010 doxX DoxX family protein COG:COG2259, COG:S, RefSeq:WP_000766009.1, SO:0001217, UniParc:UPI00000D77EC, UniRef:UniRef100_Q2FZM5, UniRef:UniRef50_Q2FZM5, UniRef:UniRef90_Q2FZM5 contig_1 cds 1047709 1048668 + GCA000560365_01011 fecB ABC transporter substrate-binding protein COG:COG4594, COG:P, RefSeq:WP_001081351.1, SO:0001217, UniParc:UPI00000522D4, UniRef:UniRef100_W8URT6, UniRef:UniRef50_W8URT6, UniRef:UniRef90_W8URT6 contig_1 cds 1048714 1048830 - GCA000560365_01012 SAR1012 family small protein RefSeq:WP_001248716.1, SO:0001217, UniParc:UPI000169A1D9, UniRef:UniRef100_Q2FZM3, UniRef:UniRef50_Q2FZM3, UniRef:UniRef90_Q2FZM3 contig_1 cds 1048909 1049124 - GCA000560365_01013 tM2 TM2 domain-containing protein COG:COG2314, COG:R, RefSeq:WP_000867357.1, SO:0001217, UniParc:UPI00000D783B, UniRef:UniRef100_Q2FZM2, UniRef:UniRef50_Q2FZM2, UniRef:UniRef90_Q2FZM2 contig_1 cds 1049289 1049840 + GCA000560365_01014 rimI N-acetyltransferase domain-containing protein COG:COG0456, COG:J, RefSeq:WP_000620953.1, SO:0001217, UniParc:UPI000069AA8D, UniRef:UniRef100_Q2FZM1, UniRef:UniRef50_Q2FZM1, UniRef:UniRef90_Q2FZM1 contig_1 cds 1049892 1050830 - GCA000560365_01015 menA 1,4-dihydroxy-2-naphthoate polyprenyltransferase COG:COG1575, COG:H, EC:2.5.1.74, RefSeq:WP_000070966.1, SO:0001217, UniParc:UPI00000D77C6, UniRef:UniRef100_Q2FZM0, UniRef:UniRef50_Q2FZM0, UniRef:UniRef90_Q2FZM0 contig_1 cds 1051012 1052373 + GCA000560365_01016 menF isochorismate synthase COG:COG1169, COG:HQ, SO:0001217, UniParc:UPI0001D0CA69, UniRef:UniRef100_A0A1S6C6R7, UniRef:UniRef50_A0A6K1LZM7, UniRef:UniRef90_A0A0D1HF04 contig_1 cds 1052360 1054033 + GCA000560365_01017 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase COG:COG1165, COG:H, EC:2.2.1.9, GO:0000287, GO:0009234, GO:0030145, GO:0030976, GO:0070204, KEGG:K02551, RefSeq:WP_000526687.1, SO:0001217, UniParc:UPI0000054A02, UniRef:UniRef100_Q2FZL7, UniRef:UniRef50_Q8CPQ5, UniRef:UniRef90_Q2FZL7 contig_1 cds 1054020 1054823 + GCA000560365_01018 menH 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase COG:COG0596, COG:HR, EC:4.2.99.20, GO:0009234, GO:0070205, RefSeq:WP_000150195.1, SO:0001217, UniParc:UPI0000054A0D, UniRef:UniRef100_Q2FZL6, UniRef:UniRef50_A0A380H942, UniRef:UniRef90_A0A7Z7QY55 contig_1 cds 1054816 1055637 + GCA000560365_01019 menB 1,4-dihydroxy-2-naphthoyl-CoA synthase COG:COG0447, COG:H, EC:4.1.3.36, GO:0005829, GO:0008935, GO:0009234, KEGG:K01661, RefSeq:WP_000184947.1, SO:0001217, UniParc:UPI0000054A17, UniRef:UniRef100_Q5HH38, UniRef:UniRef50_Q5HH38, UniRef:UniRef90_Q5HH38 contig_1 cds 1055876 1056205 - GCA000560365_01020 sspC staphostatin B BlastRules:WP_000284457, GO:0004869, GO:0005737, KEGG:K23597, RefSeq:WP_000284457.1, SO:0001217, UniParc:UPI0000054A2B, UniRef:UniRef100_Q9EYW6, UniRef:UniRef50_Q9EYW6, UniRef:UniRef90_Q9EYW6 contig_1 cds 1056243 1057424 - GCA000560365_01021 sspB cysteine protease staphopain B BlastRules:WP_001088780, EC:3.4.22.-, GO:0005576, GO:0006508, GO:0008234, RefSeq:WP_001088780.1, SO:0001217, UniParc:UPI0000054A35, UniRef:UniRef100_Q2FZL3, UniRef:UniRef50_Q2FZL3, UniRef:UniRef90_Q2FZL3 contig_1 cds 1057506 1058516 - GCA000560365_01022 sspA Glu-specific serine endopeptidase SspA BlastRules:WP_000676549, COG:COG3591, COG:O, EC:3.4.21.19, GO:0004252, GO:0005576, GO:0006508, RefSeq:WP_000676548.1, SO:0001217, UniParc:UPI0000054A40, UniRef:UniRef100_Q2FZL2, UniRef:UniRef50_Q2FZL2, UniRef:UniRef90_Q2FZL2 contig_1 cds 1059044 1060198 - GCA000560365_01023 aspB Aminotransferase COG:COG0436, COG:E, EC:2.6.1.-, KEGG:K00841, RefSeq:WP_000777581.1, SO:0001217, UniParc:UPI00004B5B9B, UniRef:UniRef100_A0A0D6HV28, UniRef:UniRef50_Q4L550, UniRef:UniRef90_A0A0D6HV28 contig_1 cds 1060394 1061404 - GCA000560365_01024 nolL Acyltransferase 3 domain-containing protein COG:COG3594, COG:G, RefSeq:WP_000202439.1, SO:0001217, UniParc:UPI0000054B7E, UniRef:UniRef100_Q2FZL0, UniRef:UniRef50_Q2FZL0, UniRef:UniRef90_Q2FZL0 contig_1 cds 1061557 1061976 + GCA000560365_01025 marR Transcriptional regulator, MarR family, putative COG:COG1846, COG:K, RefSeq:WP_000278010.1, SO:0001217, UniParc:UPI0000696C09, UniRef:UniRef100_A0A0E8G970, UniRef:UniRef50_Q2FZK9, UniRef:UniRef90_Q2FZK9 contig_1 cds 1062183 1065953 - GCA000560365_01026 atl Bifunctional autolysin COG:COG5632, COG:M, GO:0004040, GO:0005576, GO:0008745, GO:0009253, GO:0033925, GO:0071555, RefSeq:WP_001074556.1, SO:0001217, UniParc:UPI0000696C0A, UniRef:UniRef100_A0A1S5YUC2, UniRef:UniRef50_P0C5Z8, UniRef:UniRef90_P0C5Z8 contig_1 cds 1066181 1066615 - GCA000560365_01027 elaA Putative acetyltransferase MW0937 COG:COG2153, COG:R, EC:2.3.1.-, GO:0004343, GO:0016747, KEGG:K02348, RefSeq:WP_000491986.1, SO:0001217, UniParc:UPI0000139F7C, UniRef:UniRef100_Q5HH30, UniRef:UniRef50_Q5HH30, UniRef:UniRef90_Q5HH30 contig_1 cds 1066770 1067240 - GCA000560365_01028 osmotic stress response protein BlastRules:WP_000088431, RefSeq:WP_000088431.1, SO:0001217, UniParc:UPI0000054B79, UniRef:UniRef100_P0A0Q4, UniRef:UniRef50_P0A0Q4, UniRef:UniRef90_P0A0Q4 contig_1 cds 1067288 1068505 - GCA000560365_01029 cps2a polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase BlastRules:WP_001031978, COG:COG1316, COG:M, EC:2.7.8.-, KEGG:K01005, RefSeq:WP_001031975.1, SO:0001217, UniParc:UPI0000054B78, UniRef:UniRef100_P52078, UniRef:UniRef50_P52078, UniRef:UniRef90_P52078 contig_1 cds 1068956 1070149 + GCA000560365_01030 fmtA teichoic acid D-Ala esterase FmtA BlastRules:WP_000671243, COG:COG1680, COG:V, EC:3.1.1.103, GO:0005886, GO:0016787, GO:0046677, GO:0071555, RefSeq:WP_000671243.1, SO:0001217, UniParc:UPI0000054B77, UniRef:UniRef100_Q2FZK3, UniRef:UniRef50_Q2FZK3, UniRef:UniRef90_Q2FZK3 contig_1 cds 1070687 1070977 - GCA000560365_01031 qoxD cytochrome aa3 quinol oxidase subunit IV COG:C, COG:COG3125, EC:1.10.3.-, GO:0005886, GO:0009319, GO:0009486, GO:0015078, GO:0015990, GO:0016020, GO:0016682, GO:0019646, GO:0042773, KEGG:K02829, SO:0001217, UniParc:UPI0000054B76, UniRef:UniRef100_Q2FZK2, UniRef:UniRef50_Q2FZK2, UniRef:UniRef90_Q2FZK2 contig_1 cds 1070974 1071579 - GCA000560365_01032 qoxC cytochrome aa3 quinol oxidase subunit III COG:C, COG:COG1845, EC:1.10.3.-, GO:0004129, GO:0005886, GO:0009055, GO:0015078, GO:0015990, GO:0016020, GO:0016682, GO:0019646, GO:0042773, RefSeq:WP_000017736.1, SO:0001217, UniParc:UPI0000054B75, UniRef:UniRef100_Q2FZK1, UniRef:UniRef50_P34958, UniRef:UniRef90_Q2FZK1 contig_1 cds 1071569 1073557 - GCA000560365_01033 qoxB cytochrome aa3 quinol oxidase subunit I COG:C, COG:COG0843, EC:1.10.3.-, GO:0004129, GO:0005507, GO:0005886, GO:0006119, GO:0015990, GO:0016020, GO:0016682, GO:0020037, GO:0022904, KEGG:K02827, RefSeq:WP_001010762.1, SO:0001217, UniParc:UPI0000054B74, UniRef:UniRef100_Q2FZK0, UniRef:UniRef50_E0TW66, UniRef:UniRef90_Q2FZK0 contig_1 cds 1073557 1074657 - GCA000560365_01034 qoxA cytochrome aa3 quinol oxidase subunit II COG:C, COG:COG1622, EC:1.10.3.-, GO:0004129, GO:0005507, GO:0005886, GO:0009055, GO:0009486, GO:0015078, GO:0015990, GO:0016020, GO:0016682, GO:0042773, KEGG:K02826, RefSeq:WP_000032836.1, SO:0001217, UniParc:UPI00000D7857, UniRef:UniRef100_Q2FZJ9, UniRef:UniRef50_Q2FZJ9, UniRef:UniRef90_Q2FZJ9 contig_1 cds 1075229 1075546 - GCA000560365_01035 Pesticidal crystal protein Cry22Aa Ig-like domain-containing protein RefSeq:WP_001037831.1, SO:0001217, UniParc:UPI0000054B71, UniRef:UniRef100_Q2FZJ7, UniRef:UniRef50_Q2FZJ7, UniRef:UniRef90_Q2FZJ7 contig_1 cds 1076351 1077211 - GCA000560365_01036 folD bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD COG:COG0190, COG:H, GO:0000105, GO:0004477, GO:0004488, GO:0005829, GO:0006164, GO:0009086, GO:0035999, RefSeq:WP_000225837.1, SO:0001217, UniParc:UPI00000D9D65, UniRef:UniRef100_Q2FZJ6, UniRef:UniRef50_Q2FZJ6, UniRef:UniRef90_Q2FZJ6 contig_1 cds 1077412 1077894 + GCA000560365_01037 purE N5-carboxyaminoimidazole ribonucleotide mutase COG:COG0041, COG:F, RefSeq:WP_000861572.1, SO:0001217, UniParc:UPI00000D7728, UniRef:UniRef100_W8URR1, UniRef:UniRef50_P43849, UniRef:UniRef90_Q2FZJ5 contig_1 cds 1077881 1079005 + GCA000560365_01038 purK 5-(carboxyamino)imidazole ribonucleotide synthase COG:COG0026, COG:F, EC:6.3.4.18, GO:0004638, GO:0005524, GO:0005829, GO:0006189, GO:0034028, GO:0046872, RefSeq:WP_001010412.1, SO:0001217, UniParc:UPI0000054B6E, UniRef:UniRef100_Q5HH19, UniRef:UniRef50_Q49WI9, UniRef:UniRef90_Q99V32 contig_1 cds 1079009 1079713 + GCA000560365_01039 purC phosphoribosylaminoimidazolesuccinocarboxamide synthase COG:COG0152, COG:F, EC:6.3.2.6, GO:0004639, GO:0005524, GO:0006164, GO:0006189, GO:0009236, RefSeq:WP_000174053.1, SO:0001217, UniParc:UPI0000054B6D, UniRef:UniRef100_Q2FZJ3, UniRef:UniRef50_Q81IQ6, UniRef:UniRef90_Q2FZJ3 contig_1 cds 1079713 1079976 + GCA000560365_01040 purS phosphoribosylformylglycinamidine synthase subunit PurS COG:COG1828, COG:F, EC:6.3.5.3, RefSeq:WP_000848350.1, SO:0001217, UniParc:UPI0000054B6B, UniRef:UniRef100_Q2FZJ2, UniRef:UniRef50_A0A239ZQS9, UniRef:UniRef90_Q2FZJ2 contig_1 cds 1079978 1080649 + GCA000560365_01041 purQ phosphoribosylformylglycinamidine synthase I COG:COG0047, COG:F, EC:6.3.5.3, GO:0004359, GO:0004642, GO:0005524, GO:0005737, GO:0006189, RefSeq:WP_000666799.1, SO:0001217, UniParc:UPI0000132B64, UniRef:UniRef100_Q2FZJ1, UniRef:UniRef50_P12041, UniRef:UniRef90_Q2FZJ1 contig_1 cds 1080642 1082831 + GCA000560365_01042 purL phosphoribosylformylglycinamidine synthase subunit PurL COG:COG0046, COG:F, EC:6.3.5.3, GO:0000287, GO:0004642, GO:0005524, GO:0005737, GO:0006189, KEGG:K23269, RefSeq:WP_000032727.1, SO:0001217, UniParc:UPI0000054B69, UniRef:UniRef100_Q2FZJ0, UniRef:UniRef50_Q2FZJ0, UniRef:UniRef90_Q2FZJ0 contig_1 cds 1082810 1084294 + GCA000560365_01043 purF amidophosphoribosyltransferase COG:COG0034, COG:F, EC:2.4.2.14, GO:0000287, GO:0004044, GO:0006189, GO:0009113, KEGG:K00764, RefSeq:WP_000483713.1, SO:0001217, UniParc:UPI00000D9D67, UniRef:UniRef100_Q5HH14, UniRef:UniRef50_Q5HQA0, UniRef:UniRef90_Q5HQA0 contig_1 cds 1084287 1085315 + GCA000560365_01044 purM Phosphoribosylformylglycinamidine cyclo-ligase COG:COG0150, COG:F, EC:6.3.3.1, GO:0004637, GO:0004641, GO:0005524, GO:0005829, GO:0006189, GO:0046084, RefSeq:WP_000030812.1, SO:0001217, UniParc:UPI0000054B67, UniRef:UniRef100_Q2FZI8, UniRef:UniRef50_Q2FZI8, UniRef:UniRef90_Q2FZI8 contig_1 cds 1085318 1085884 + GCA000560365_01045 purN phosphoribosylglycinamide formyltransferase COG:COG0299, COG:F, EC:2.1.2.2, GO:0004644, GO:0005829, GO:0006189, RefSeq:WP_000238664.1, SO:0001217, UniParc:UPI0000054B66, UniRef:UniRef100_Q5HH12, UniRef:UniRef50_Q5HQ98, UniRef:UniRef90_P65897 contig_1 cds 1085899 1087377 + GCA000560365_01046 purH bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase COG:COG0138, COG:F, EC:2.1.2.3, EC:3.5.4.10, GO:0003824, GO:0003937, GO:0004643, GO:0005829, GO:0006164, GO:0006189, KEGG:K00602, RefSeq:WP_000709291.1, SO:0001217, UniParc:UPI0000696C0C, UniRef:UniRef100_Q2FI05, UniRef:UniRef50_P67543, UniRef:UniRef90_P67543 contig_1 cds 1087399 1088646 + GCA000560365_01047 purD Phosphoribosylamine--glycine ligase COG:COG0151, COG:F, EC:6.3.4.13, GO:0004637, GO:0005524, GO:0006189, GO:0009113, GO:0046872, RefSeq:WP_001101908.1, SO:0001217, UniParc:UPI0000054B64, UniRef:UniRef100_Q2FZI5, UniRef:UniRef50_P65895, UniRef:UniRef90_P65895 contig_1 cds 1088911 1089717 - GCA000560365_01048 ecfT Energy-coupling factor transporter transmembrane protein EcfT COG:COG0619, COG:H, KEGG:K16785, RefSeq:WP_000273253.1, SO:0001217, UniParc:UPI00000CA9C8, UniRef:UniRef100_Q2FZI4, UniRef:UniRef50_S2XR66, UniRef:UniRef90_Q2FZI4 contig_1 cds 1089710 1091110 - GCA000560365_01049 ccmA heme ABC exporter ATP-binding protein CcmA COG:COG1136, COG:M, EC:7.6.2.5, GO:0015439, GO:0015886, GO:0017004, GO:0022857, GO:0043190, RefSeq:WP_000921968.1, SO:0001217, UniParc:UPI00004B5B9F, UniRef:UniRef100_Q2FZI3, UniRef:UniRef50_S2XKC2, UniRef:UniRef90_Q2FZI3 contig_1 cds 1091125 1091700 - GCA000560365_01050 ykoE Thiamine ABC transporter permease COG:COG4721, COG:H, KEGG:K16925, RefSeq:WP_000033477.1, SO:0001217, UniParc:UPI0000054B61, UniRef:UniRef100_Q2FZI2, UniRef:UniRef50_Q2FZI2, UniRef:UniRef90_Q2FZI2 contig_1 ncRNA-region 1091777 1091877 - TPP riboswitch aptamer (THI element) RFAM:RF00059, SO:0000035 contig_1 cds 1092284 1092418 - GCA000560365_01051 graF glycopeptide resistance-associated protein GraF RefSeq:WP_000064214.1, SO:0001217, UniParc:UPI0000054B60, UniRef:UniRef100_Q2FZI0, UniRef:UniRef50_Q2FZI0, UniRef:UniRef90_Q2FZI0 contig_1 cds 1092570 1093865 + GCA000560365_01052 auxA lipoteichoic acid stability factor AuxA RefSeq:WP_000009069.1, SO:0001217, UniParc:UPI00000D775F, UniRef:UniRef100_Q2FZH9, UniRef:UniRef50_A0A1E9A5G9, UniRef:UniRef90_Q2FZH9 contig_1 ncRNA 1093323 1093450 - GCA000560365_01053 sau-59 Staphylococcus sRNA sau-59 RFAM:RF02393, SO:0000655 contig_1 cds 1094290 1095462 + GCA000560365_01054 rlmK Class I SAM-dependent rRNA methyltransferase COG:COG1092, COG:J, RefSeq:WP_000685079.1, SO:0001217, UniParc:UPI0000054B5E, UniRef:UniRef100_Q2FZH8, UniRef:UniRef50_Q2FZH8, UniRef:UniRef90_Q2FZH8 contig_1 cds 1095516 1096058 + GCA000560365_01055 DUF697 domain-containing protein RefSeq:WP_000505965.1, SO:0001217, UniParc:UPI0000047404, UniRef:UniRef100_Q2FZH7, UniRef:UniRef50_A0AAE5M2R9, UniRef:UniRef90_Q2FZH7 contig_1 cds 1096212 1096478 + GCA000560365_01056 ptsH phosphocarrier protein HPr COG:COG1925, COG:TG, GO:0005737, GO:0009401, RefSeq:WP_000437472.1, SO:0001217, UniParc:UPI00001328F8, UniRef:UniRef100_Q5HH02, UniRef:UniRef50_Q9F166, UniRef:UniRef90_Q5HH02 contig_1 cds 1096481 1098199 + GCA000560365_01057 ptsI Phosphoenolpyruvate-protein phosphotransferase COG:COG1080, COG:G, EC:2.7.3.9, GO:0005737, GO:0008965, GO:0009401, GO:0016301, GO:0046872, RefSeq:WP_000040054.1, SO:0001217, UniParc:UPI0000054B5C, UniRef:UniRef100_Q5HH01, UniRef:UniRef50_P23533, UniRef:UniRef90_Q99V14 contig_1 cds 1098436 1098669 - GCA000560365_01058 nrdH glutaredoxin-like protein NrdH BlastRules:WP_001289614, COG:COG0695, COG:O, RefSeq:WP_001289614.1, SO:0001217, UniParc:UPI0000054B5B, UniRef:UniRef100_Q2FZH4, UniRef:UniRef50_Q2FZH4, UniRef:UniRef90_Q2FZH4 contig_1 cds 1098867 1100228 + GCA000560365_01059 appC Putative cytochrome bd menaquinol oxidase subunit I COG:C, COG:COG1271, EC:7.1.1.7, KEGG:K00425, RefSeq:WP_000381849.1, SO:0001217, UniParc:UPI0000054B5A, UniRef:UniRef100_Q2FZH3, UniRef:UniRef50_A0A2S5D5L8, UniRef:UniRef90_A0A7U7PY91 contig_1 cds 1100225 1101244 + GCA000560365_01060 appB Cytochrome d ubiquinol oxidase, subunit II, putative COG:C, COG:COG1294, EC:7.1.1.7, KEGG:K00426, RefSeq:WP_000638456.1, SO:0001217, UniParc:UPI0000054B57, UniRef:UniRef100_Q2FZH2, UniRef:UniRef50_A0AAJ5RM05, UniRef:UniRef90_Q2FZH2 contig_1 cds 1101377 1102039 + GCA000560365_01061 trkA TrkA family potassium uptake protein COG:COG0569, COG:PT, RefSeq:WP_000514290.1, SO:0001217, UniParc:UPI0000054B56, UniRef:UniRef100_Q2FZH1, UniRef:UniRef50_Q2FZH1, UniRef:UniRef90_Q2FZH1 contig_1 ncRNA 1102030 1102297 + GCA000560365_01062 S35 Staphylococcus sRNA 35 (srn_0335) RFAM:RF02894, SO:0000655 contig_1 cds 1102388 1104085 - GCA000560365_01063 rnjA ribonuclease J1 COG:COG0595, COG:J, EC:3.1.-.-, GO:0003723, GO:0004521, GO:0004534, GO:0005737, GO:0006364, GO:0008270, RefSeq:WP_000811375.1, SO:0001217, UniParc:UPI0000054B55, UniRef:UniRef100_Q2FZG9, UniRef:UniRef50_Q2FZG9, UniRef:UniRef90_Q2FZG9 contig_1 cds 1104085 1104303 - GCA000560365_01064 rpoY DNA-directed RNA polymerase subunit epsilon COG:COG5503, COG:KV, EC:2.7.7.6, GO:0000428, GO:0001054, GO:0001055, GO:0001056, GO:0001057, GO:0001058, GO:0001066, GO:0003677, RefSeq:WP_000257888.1, SO:0001217, UniParc:UPI0000054B54, UniRef:UniRef100_Q2FZG8, UniRef:UniRef50_Q2FZG8, UniRef:UniRef90_Q2FZG8 contig_1 cds 1104784 1105335 - GCA000560365_01065 def peptide deformylase COG:COG0242, COG:J, EC:3.5.1.88, GO:0006412, GO:0036211, GO:0042586, GO:0043686, GO:0046872, KEGG:K01462, RefSeq:WP_000957036.1, SO:0001217, UniParc:UPI00000D9D72, UniRef:UniRef100_Q5HGZ3, UniRef:UniRef50_Q45495, UniRef:UniRef90_Q5HGZ3 contig_1 cds 1105700 1106326 + GCA000560365_01066 Lipoprotein RefSeq:WP_000668339.1, SO:0001217, UniParc:UPI00000D9D73, UniRef:UniRef100_Q2FZG5, UniRef:UniRef50_Q2FZG5, UniRef:UniRef90_Q2FZG5 contig_1 cds 1106497 1107609 + GCA000560365_01067 pdhA pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha COG:C, COG:COG1071, EC:1.2.4.1, GO:0004739, GO:0006086, GO:0009083, GO:0045254, RefSeq:WP_000035320.1, SO:0001217, UniParc:UPI000000978E, UniRef:UniRef100_Q5HGZ1, UniRef:UniRef50_P21881, UniRef:UniRef90_Q5HGZ1 contig_1 cds 1107613 1108590 + GCA000560365_01068 pdhB Pyruvate dehydrogenase E1 component subunit beta COG:C, COG:COG0022, EC:1.2.4.1, GO:0004739, RefSeq:WP_000068176.1, SO:0001217, UniParc:UPI0000054B50, UniRef:UniRef100_P0A0A1, UniRef:UniRef50_Q5HQ75, UniRef:UniRef90_Q5HQ75 contig_1 cds 1108681 1109973 + GCA000560365_01069 pdhC Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex COG:C, COG:COG0508, EC:2.3.1.12, GO:0004742, GO:0005737, GO:0031405, RefSeq:WP_000863440.1, SO:0001217, UniParc:UPI00000D9D74, UniRef:UniRef100_Q5HGY9, UniRef:UniRef50_P21883, UniRef:UniRef90_P65635 contig_1 cds 1109977 1111383 + GCA000560365_01070 lpdA dihydrolipoyl dehydrogenase COG:C, COG:COG1249, EC:1.8.1.4, GO:0004148, GO:0005737, GO:0006090, GO:0006103, GO:0016020, GO:0050660, KEGG:K00382, RefSeq:WP_000260118.1, SO:0001217, UniParc:UPI0000696C0E, UniRef:UniRef100_A0A5A8VFS2, UniRef:UniRef50_P11959, UniRef:UniRef90_Q5HGY8 contig_1 cds 1111551 1111826 + GCA000560365_01071 yktA UPF0223 protein SaurJH1_1179 COG:COG4476, COG:S, RefSeq:WP_000455597.1, SO:0001217, UniParc:UPI000000978F, UniRef:UniRef100_Q2G2A2, UniRef:UniRef50_Q2G2A2, UniRef:UniRef90_Q2G2A2 contig_1 cds 1111970 1112509 + GCA000560365_01072 qdoI HTH cro/C1-type domain-containing protein COG:COG1917, COG:R, RefSeq:WP_001020625.1, SO:0001217, UniParc:UPI0000054B4B, UniRef:UniRef100_Q2G2A6, UniRef:UniRef50_Q2G2A6, UniRef:UniRef90_Q2G2A6 contig_1 cds 1112522 1113616 + GCA000560365_01073 potA Spermidine/putrescine import ATP-binding protein PotA COG:COG3842, COG:E, EC:7.6.2.11, GO:0005524, GO:0015417, GO:0016887, GO:0043190, RefSeq:WP_000433551.1, SO:0001217, UniParc:UPI00000D7714, UniRef:UniRef100_Q2G2A7, UniRef:UniRef50_Q24XJ2, UniRef:UniRef90_Q2G2A7 contig_1 cds 1113609 1114406 + GCA000560365_01074 potB Spermidine/putrescine ABC transporter-like protein COG:COG1176, COG:E, RefSeq:WP_001246561.1, SO:0001217, UniParc:UPI0000054B49, UniRef:UniRef100_Q2G2B0, UniRef:UniRef50_S2XR89, UniRef:UniRef90_A0A7U7IE88 contig_1 cds 1114412 1115221 + GCA000560365_01075 potC ABC transporter permease COG:COG1177, COG:E, RefSeq:WP_000872390.1, SO:0001217, UniParc:UPI00000D7872, UniRef:UniRef100_Q2G2A9, UniRef:UniRef50_S2XKD8, UniRef:UniRef90_A0A2K4AL30 contig_1 cds 1115221 1116294 + GCA000560365_01076 potD ABC transporter, periplasmic spermidine putrescine-binding protein potD COG:COG0687, COG:E, RefSeq:WP_000819690.1, SO:0001217, UniParc:UPI0000054B47, UniRef:UniRef100_Q2G2A8, UniRef:UniRef50_Q5HQ67, UniRef:UniRef90_A0A390B6L2 contig_1 cds 1116368 1117387 + GCA000560365_01077 auxB lipoteichoic acid stability factor AuxB RefSeq:WP_000145499.1, SO:0001217, UniParc:UPI00000522D5, UniRef:UniRef100_Q2G2G6, UniRef:UniRef50_A0A974KWU6, UniRef:UniRef90_Q2G2G6 contig_1 cds 1117670 1118089 + GCA000560365_01078 DUF4064 domain-containing protein RefSeq:WP_001080462.1, SO:0001217, UniParc:UPI0000054B46, UniRef:UniRef100_Q2G2G5, UniRef:UniRef50_Q2G2G5, UniRef:UniRef90_Q2G2G5 contig_1 cds 1118171 1119523 - GCA000560365_01079 mntH Nramp family divalent metal transporter COG:COG1914, COG:P, GO:0005384, GO:0005886, GO:0015086, GO:0015293, GO:0016020, GO:0022857, GO:0034755, GO:0046872, GO:0055085, RefSeq:WP_001060842.1, SO:0001217, UniParc:UPI0000054B43, UniRef:UniRef100_Q2G2G3, UniRef:UniRef50_Q2G2G3, UniRef:UniRef90_Q2G2G3 contig_1 cds 1119707 1120321 - GCA000560365_01080 yktB UPF0637 protein MW0989 COG:COG4493, COG:S, RefSeq:WP_000170610.1, SO:0001217, UniParc:UPI0000054B42, UniRef:UniRef100_Q2G2G7, UniRef:UniRef50_Q2G2G7, UniRef:UniRef90_Q2G2G7 contig_1 cds 1120478 1121305 + GCA000560365_01081 suhB Inositol monophosphatase COG:COG0483, COG:G, EC:3.1.3.25, KEGG:K01092, RefSeq:WP_001240311.1, SO:0001217, UniParc:UPI00004B5BA1, UniRef:UniRef100_Q2G2G4, UniRef:UniRef50_A0A654A156, UniRef:UniRef90_A0A659IB49 contig_1 cds 1121459 1121650 - GCA000560365_01082 ylaF YlaF family protein RefSeq:WP_000810620.1, SO:0001217, UniParc:UPI0000054B40, UniRef:UniRef100_W8TML1, UniRef:UniRef50_Q49WN3, UniRef:UniRef90_A0A2K4ALB3 contig_1 cds 1121752 1123599 + GCA000560365_01083 typA translational GTPase TypA COG:COG1217, COG:T, GO:0003924, GO:0005525, GO:0006412, GO:0006950, RefSeq:WP_000182654.1, SO:0001217, UniParc:UPI00000D768A, UniRef:UniRef100_Q2G1Y6, UniRef:UniRef50_A0A0R2DHU7, UniRef:UniRef90_A0A2A1K7F6 contig_1 cds 1123908 1124390 - GCA000560365_01084 Phage protein RefSeq:WP_000614712.1, SO:0001217, UniParc:UPI00000D7668, UniRef:UniRef100_Q2G1Y7, UniRef:UniRef50_B9DPZ4, UniRef:UniRef90_A0A7U7JTX4 contig_1 cds 1124531 1124806 + GCA000560365_01085 ylaN UPF0358 protein SaurJH1_1194 COG:COG4838, COG:S, RefSeq:WP_001118417.1, SO:0001217, UniParc:UPI00000D7665, UniRef:UniRef100_Q2G2C3, UniRef:UniRef50_Q2G2C3, UniRef:UniRef90_Q2G2C3 contig_1 cds 1125120 1126346 + GCA000560365_01086 ftsW cell division protein FtsW BlastRules:WP_000787940, COG:COG0772, COG:D, KEGG:K03588, RefSeq:WP_000787940.1, SO:0001217, UniParc:UPI00000D9D78, UniRef:UniRef100_Q2G2C2, UniRef:UniRef50_A0AAE8PBF8, UniRef:UniRef90_A0AAE8PBF8 contig_1 cds 1126900 1130352 + GCA000560365_01087 pycA pyruvate carboxylase COG:C, COG:COG1038, EC:6.4.1.1, GO:0004736, GO:0005524, GO:0005737, GO:0006090, GO:0006094, GO:0009374, GO:0042802, GO:0046872, KEGG:K01958, RefSeq:WP_000809526.1, SO:0001217, UniParc:UPI0000696C0F, UniRef:UniRef100_A0A0E8G8A7, UniRef:UniRef50_A0A0H3JRU9, UniRef:UniRef90_A0A0H3JRU9 contig_1 cds 1130492 1131562 - GCA000560365_01088 ctaA Heme A synthase COG:COG1612, COG:H, EC:1.17.99.9, GO:0005886, GO:0006784, GO:0016653, GO:0046872, KEGG:K02259, RefSeq:WP_001548380.1, SO:0001217, UniParc:UPI0000054B38, UniRef:UniRef100_A0A0D6HTV8, UniRef:UniRef50_Q2G2C0, UniRef:UniRef90_Q2G2C0 contig_1 cds 1131843 1132754 + GCA000560365_01089 cyoE heme o synthase COG:COG0109, COG:HI, EC:2.5.1.141, GO:0005886, GO:0006783, GO:0008495, GO:0016020, GO:0048034, RefSeq:WP_000031401.1, SO:0001217, UniParc:UPI0000054B37, UniRef:UniRef100_Q2G2B9, UniRef:UniRef50_Q8CPM1, UniRef:UniRef90_Q2G2B9 contig_1 cds 1132779 1133240 + GCA000560365_01090 ctaM DUF420 domain-containing protein COG:COG2322, COG:O, KEGG:K08976, RefSeq:WP_000538766.1, SO:0001217, UniParc:UPI00000D787A, UniRef:UniRef100_Q2FZG3, UniRef:UniRef50_Q2FZG3, UniRef:UniRef90_Q2FZG3 contig_1 cds 1133567 1134604 + GCA000560365_01091 ykwD CAP domain-containing protein COG:COG2340, COG:DR, RefSeq:WP_000733409.1, SO:0001217, UniParc:UPI00000D77DB, UniRef:UniRef100_W8TQF1, UniRef:UniRef50_Q5HQ49, UniRef:UniRef90_A0A6A9GWF2 contig_1 cds 1134620 1135054 + GCA000560365_01092 ylbF YlbF family regulator COG:COG3679, COG:T, RefSeq:WP_000606480.1, SO:0001217, UniParc:UPI0000054B34, UniRef:UniRef100_Q2FZG0, UniRef:UniRef50_Q2FZG0, UniRef:UniRef90_Q2FZG0 contig_1 cds 1135117 1136043 - GCA000560365_01093 ugpQ Glycerophosphodiester phosphodiesterase COG:COG0584, COG:I, EC:3.1.4.46, KEGG:K01126, RefSeq:WP_000757569.1, SO:0001217, UniParc:UPI0000054B33, UniRef:UniRef100_Q2FZF9, UniRef:UniRef50_A0A3A3AIN7, UniRef:UniRef90_A0A3A3AIN7 contig_1 cds 1136282 1136536 + GCA000560365_01094 ylbG UPF0298 protein SACOL1131 COG:COG4471, COG:S, GO:0005737, RefSeq:WP_001049150.1, SO:0001217, UniParc:UPI0000054B32, UniRef:UniRef100_Q2FZF8, UniRef:UniRef50_Q2FZF8, UniRef:UniRef90_Q2FZF8 contig_1 cds 1136539 1136928 - GCA000560365_01095 Methylthioribose kinase RefSeq:WP_000814565.1, SO:0001217, UniParc:UPI0000054B31, UniRef:UniRef100_Q2FZF7, UniRef:UniRef50_B9DPZ2, UniRef:UniRef90_A0A2K4AL88 contig_1 cds 1136998 1137540 + GCA000560365_01096 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD COG:COG0742, COG:J, EC:2.1.1.171, GO:0031167, GO:0052913, RefSeq:WP_001263796.1, SO:0001217, UniParc:UPI00000D7739, UniRef:UniRef100_Q2FZF6, UniRef:UniRef50_A0A9N8IIV2, UniRef:UniRef90_A0A9N8IIV2 contig_1 cds 1137542 1138024 + GCA000560365_01097 coaD pantetheine-phosphate adenylyltransferase COG:COG0669, COG:H, EC:2.7.7.3, GO:0004595, GO:0005524, GO:0005737, GO:0015937, KEGG:K00954, RefSeq:WP_000401377.1, SO:0001217, UniParc:UPI0000054B2E, UniRef:UniRef100_Q2FZF5, UniRef:UniRef50_Q2FZF5, UniRef:UniRef90_Q2FZF5 contig_1 cds 1138086 1139225 - GCA000560365_01098 tmcAL nucleotidyltransferase COG:COG1323, COG:J, EC:6.3.4.-, GO:0000049, GO:0005524, GO:0005737, GO:0006400, GO:0016879, KEGG:K27343, RefSeq:WP_000843611.1, SO:0001217, UniParc:UPI00000D7661, UniRef:UniRef100_Q2FZF4, UniRef:UniRef50_Q2FZF4, UniRef:UniRef90_Q2FZF4 contig_1 cds 1139352 1139909 + GCA000560365_01099 yceD DUF177 domain-containing protein COG:COG1399, COG:J, RefSeq:WP_000872158.1, SO:0001217, UniParc:UPI00000D7803, UniRef:UniRef100_Q2FZF3, UniRef:UniRef50_Q2FZF3, UniRef:UniRef90_Q2FZF3 contig_1 cds 1139989 1140162 + GCA000560365_01100 rpmF 50S ribosomal protein L32 COG:COG0333, COG:J, GO:0003735, GO:0006412, GO:0015934, RefSeq:WP_000290472.1, SO:0001217, UniParc:UPI0000133F6C, UniRef:UniRef100_Q2FHV3, UniRef:UniRef50_B7JC05, UniRef:UniRef90_Q5HQ39 contig_1 cds 1140316 1142253 - GCA000560365_01101 isdB iron-regulated surface determinant protein B, haemoglobin receptor COG:COG5386, COG:P, GO:0005576, GO:0015232, GO:0015886, GO:0020037, GO:0046872, RefSeq:WP_001041586.1, SO:0001217, UniParc:UPI0000052308, UniRef:UniRef100_Q2FZF0, UniRef:UniRef50_Q2FZF0, UniRef:UniRef90_Q2FZF0, VFDB:VFC0272, VFDB:VFG001317 contig_1 cds 1142456 1143508 - GCA000560365_01102 isdA iron-regulated surface determinant protein A COG:COG5386, COG:P, GO:0005576, GO:0046872, RefSeq:WP_000160859.1, SO:0001217, UniParc:UPI0000054409, UniRef:UniRef100_Q2FZE9, UniRef:UniRef50_Q2FZE9, UniRef:UniRef90_Q2FZE9, VFDB:VFC0272, VFDB:VFG001318 contig_1 cds 1143717 1144400 + GCA000560365_01103 isdC iron-regulated surface determinant protein C COG:COG5386, COG:P, GO:0005576, GO:0009274, GO:0015886, GO:0030492, GO:0046872, RefSeq:WP_000789821.1, SO:0001217, UniParc:UPI00000D76CB, UniRef:UniRef100_Q8KQR1, UniRef:UniRef50_Q8KQR1, UniRef:UniRef90_Q8KQR1, VFDB:VFC0272, VFDB:VFG001319 contig_1 cds 1144400 1145476 + GCA000560365_01104 isdD iron-regulated surface determinant protein D KEGG:K25116, RefSeq:WP_001246698.1, SO:0001217, UniParc:UPI0000054407, UniRef:UniRef100_Q2FZE7, UniRef:UniRef50_Q2FZE7, UniRef:UniRef90_Q2FZE7, VFDB:VFC0272, VFDB:VFG044266 contig_1 cds 1145473 1146351 + GCA000560365_01105 isdE iron-regulated surface determinant protein E COG:COG0614, COG:P, GO:0005886, GO:0015886, GO:0016020, GO:0020037, GO:0046872, GO:0071281, RefSeq:WP_001220199.1, SO:0001217, UniParc:UPI00000D7746, UniRef:UniRef100_Q2FZE6, UniRef:UniRef50_Q2FZE6, UniRef:UniRef90_Q2FZE6, VFDB:VFC0272, VFDB:VFG001321 contig_1 cds 1146361 1147329 + GCA000560365_01106 isdF iron-regulated surface determinant protein F, ATP-binding-cassette-type transmembrane transporter COG:COG0609, COG:P, GO:0005886, GO:0022857, GO:0033214, SO:0001217, UniParc:UPI00000BE5B6, UniRef:UniRef100_Q2FHU7, UniRef:UniRef50_Q2FZE5, UniRef:UniRef90_Q2FZE5, VFDB:VFC0272, VFDB:VFG044268 contig_1 cds 1147391 1148125 + GCA000560365_01107 srtB NPQTN specific sortase B COG:COG4509, COG:S, EC:3.4.22.71, GO:0004197, GO:0005886, GO:0016485, GO:0016787, GO:0045184, KEGG:K08600, RefSeq:WP_001242429.1, SO:0001217, UniParc:UPI0000054404, UniRef:UniRef100_Q2FZE3, UniRef:UniRef50_Q2FZE3, UniRef:UniRef90_Q2FZE3, VFDB:VFC0272, VFDB:VFG044269 contig_1 cds 1148144 1148467 + GCA000560365_01108 isdG staphylobilin-forming heme oxygenase IsdG BlastRules:WP_000670950, COG:COG2329, COG:H, EC:1.14.99.48, GO:0004392, GO:0005506, GO:0005737, GO:0020037, GO:0033212, GO:0042167, KEGG:K07145, RefSeq:WP_000670950.1, SO:0001217, UniParc:UPI0000054403, UniRef:UniRef100_Q2FZE2, UniRef:UniRef50_Q2FZE2, UniRef:UniRef90_Q2FZE2 contig_1 cds 1148851 1149591 + GCA000560365_01109 spoU RNA methyltransferase COG:COG0566, COG:J, RefSeq:WP_000435374.1, SO:0001217, UniParc:UPI0000054402, UniRef:UniRef100_Q2FZE0, UniRef:UniRef50_A0A098H324, UniRef:UniRef90_A0A098H324 contig_1 cds 1149972 1151030 + GCA000560365_01110 pheS phenylalanine--tRNA ligase subunit alpha EC:6.1.1.20, GO:0000049, GO:0000166, GO:0000287, GO:0004826, GO:0005524, GO:0005737, GO:0006432, GO:0016740, KEGG:K01889, RefSeq:WP_000003559.1, SO:0001217, UniParc:UPI0000054401, UniRef:UniRef100_Q2FZD9, UniRef:UniRef50_Q4L5E3, UniRef:UniRef90_Q2FZD9 contig_1 cds 1151030 1153432 + GCA000560365_01111 pheT phenylalanine--tRNA ligase subunit beta COG:COG0073, COG:J, EC:6.1.1.20, GO:0000049, GO:0000287, GO:0004826, GO:0005524, GO:0006432, GO:0009328, GO:0016740, KEGG:K01890, RefSeq:WP_000908981.1, SO:0001217, UniParc:UPI0000696C11, UniRef:UniRef100_Q2FHU2, UniRef:UniRef50_Q4L5E4, UniRef:UniRef90_Q2FHU2 contig_1 cds 1153603 1154541 - GCA000560365_01112 rnhC ribonuclease HIII COG:COG1039, COG:L, EC:3.1.26.4, GO:0000287, GO:0003723, GO:0004523, GO:0005737, GO:0006298, GO:0006401, GO:0032299, GO:0043137, KEGG:K03471, RefSeq:WP_001284258.1, SO:0001217, UniParc:UPI00004B5BA8, UniRef:UniRef100_Q2FZD7, UniRef:UniRef50_Q2FZD7, UniRef:UniRef90_Q2FZD7 contig_1 cds 1154911 1155177 + GCA000560365_01113 zapA cell division protein ZapA GO:0051301, SO:0001217, UniParc:UPI00004B5BA9, UniRef:UniRef100_A0A0D3Q6G5, UniRef:UniRef50_A0A085UFE6, UniRef:UniRef90_A0A0D3Q6G5 contig_1 cds 1155178 1155699 + GCA000560365_01114 cvpA CvpA family protein COG:COG1286, COG:FM, RefSeq:WP_000234068.1, SO:0001217, UniParc:UPI00000543FD, UniRef:UniRef100_Q2FZD5, UniRef:UniRef50_Q2FZD5, UniRef:UniRef90_Q2FZD5 contig_1 cds 1155772 1157484 + GCA000560365_01115 polX DNA polymerase/3'-5' exonuclease PolX COG:COG1796, COG:L, GO:0003677, GO:0003887, GO:0006281, RefSeq:WP_000161942.1, SO:0001217, UniParc:UPI00000543FC, UniRef:UniRef100_Q2FZD4, UniRef:UniRef50_A0A0U1MIQ0, UniRef:UniRef90_A0A0U1MIQ0 contig_1 cds 1157494 1159842 + GCA000560365_01116 mutS2 endonuclease MutS2 COG:COG1193, COG:J, EC:3.1.-.-, GO:0004519, GO:0005524, GO:0006259, GO:0006298, GO:0016887, GO:0019843, GO:0030983, GO:0045910, GO:0140664, KEGG:K07456, RefSeq:WP_001249285.1, SO:0001217, UniParc:UPI00000543FB, UniRef:UniRef100_Q2FZD3, UniRef:UniRef50_Q2FZD3, UniRef:UniRef90_Q2FZD3 contig_1 cds 1160015 1160329 + GCA000560365_01117 trxA thioredoxin COG:COG3118, COG:O, GO:0005829, GO:0015035, GO:0045454, RefSeq:WP_001018928.1, SO:0001217, UniParc:UPI00000D78B6, UniRef:UniRef100_Q2FZD2, UniRef:UniRef50_P14949, UniRef:UniRef90_Q2FZD2 contig_1 cds 1160653 1162434 + GCA000560365_01118 uvrC excinuclease ABC subunit UvrC COG:COG0322, COG:L, GO:0003677, GO:0005737, GO:0006289, GO:0009380, GO:0009381, GO:0009432, KEGG:K03703, RefSeq:WP_000390529.1, SO:0001217, UniParc:UPI00004B5BAA, UniRef:UniRef100_Q2FZD0, UniRef:UniRef50_Q8DQQ9, UniRef:UniRef90_Q2FZD0 contig_1 cds 1162758 1163372 + GCA000560365_01119 sdhC succinate dehydrogenase, cytochrome b556 subunit COG:C, COG:COG2009, GO:0000104, GO:0006099, GO:0009055, GO:0045273, RefSeq:WP_000079317.1, SO:0001217, UniParc:UPI00000D786C, UniRef:UniRef100_Q2FZC9, UniRef:UniRef50_P08064, UniRef:UniRef90_A0A7U7JU09 contig_1 cds 1163424 1165190 + GCA000560365_01120 sdhA succinate dehydrogenase flavoprotein subunit COG:C, COG:COG1053, RefSeq:WP_000818278.1, SO:0001217, UniParc:UPI00000543F4, UniRef:UniRef100_Q2FZC8, UniRef:UniRef50_P08065, UniRef:UniRef90_A0AAE8PAN5 contig_1 cds 1165190 1166005 + GCA000560365_01121 sdhB succinate dehydrogenase iron-sulfur subunit COG:C, COG:COG0479, GO:0006099, GO:0009055, GO:0016491, GO:0051536, RefSeq:WP_000139712.1, SO:0001217, UniParc:UPI00000543F3, UniRef:UniRef100_Q2FZC7, UniRef:UniRef50_P08066, UniRef:UniRef90_A0AAE8PBW8 contig_1 cds 1166241 1167041 + GCA000560365_01122 racE glutamate racemase COG:COG0796, COG:M, EC:5.1.1.3, GO:0008152, GO:0008360, GO:0008881, GO:0009252, GO:0071555, RefSeq:WP_001039654.1, SO:0001217, UniParc:UPI0001B3A97B, UniRef:UniRef100_UPI0001B3A97B, UniRef:UniRef50_Q6GHT5, UniRef:UniRef90_Q6GHT5 contig_1 cds 1167053 1167640 + GCA000560365_01123 rdgB XTP/dITP diphosphatase COG:COG0127, COG:F, EC:3.6.1.66, GO:0000166, GO:0005829, GO:0009117, GO:0009143, GO:0009146, GO:0017111, GO:0035870, GO:0036220, GO:0036222, GO:0046872, GO:0047429, KEGG:K01519, RefSeq:WP_000659317.1, SO:0001217, UniParc:UPI00000543F1, UniRef:UniRef100_Q5HGT2, UniRef:UniRef50_Q8CSY5, UniRef:UniRef90_P64309 contig_1 cds 1167633 1168136 + GCA000560365_01124 yfcE Phosphoesterase COG:COG0622, COG:R, KEGG:K07095, RefSeq:WP_000049484.1, SO:0001217, UniParc:UPI00000D789F, UniRef:UniRef100_Q2FZC4, UniRef:UniRef50_Q2FZC4, UniRef:UniRef90_Q2FZC4 contig_1 cds 1168625 1168954 + GCA000560365_01125 ecb complement convertase inhibitor Ecb BlastRules:WP_000739209, RefSeq:WP_000739209.1, SO:0001217, UniParc:UPI00004B5BAC, UniRef:UniRef100_Q2FZC2, UniRef:UniRef50_A0A3M8VBL4, UniRef:UniRef90_Q2FZC2 contig_1 cds 1169323 1169724 - GCA000560365_01126 flr FPRL1 inhibitory protein FLIPr GO:0005576, KEGG:K14203, RefSeq:WP_000739563.1, SO:0001217, UniParc:UPI00000543EB, UniRef:UniRef100_Q2FZC0, UniRef:UniRef50_A6QG57, UniRef:UniRef90_Q2FZC0 contig_1 cds 1170396 1170902 + GCA000560365_01127 hypothetical protein RefSeq:WP_000584398.1, SO:0001217, UniParc:UPI00000543EA, UniRef:UniRef100_Q2FZB9, UniRef:UniRef50_Q2FZB9, UniRef:UniRef90_Q2FZB9 contig_1 cds 1171161 1171658 + GCA000560365_01128 efb complement convertase inhibitor Efb BlastRules:WP_000791587, GO:0001848, GO:0005615, RefSeq:WP_000791587.1, SO:0001217, UniParc:UPI00000543E9, UniRef:UniRef100_Q5HGS6, UniRef:UniRef50_P68799, UniRef:UniRef90_P68799 contig_1 cds 1171812 1172162 + GCA000560365_01129 scb complement inhibitor SCIN-B BlastRules:WP_000669537, KEGG:K14199, RefSeq:WP_000669537.1, SO:0001217, UniParc:UPI00000543E8, UniRef:UniRef100_Q2FZB7, UniRef:UniRef50_A0A0U1MK84, UniRef:UniRef90_A0A6A8G3H0 contig_1 ncRNA 1172390 1172698 - GCA000560365_01130 S35 Staphylococcus sRNA 35 (srn_0335) RFAM:RF02894, SO:0000655 contig_1 cds 1172815 1173000 - GCA000560365_01131 DUF4044 domain-containing protein RefSeq:WP_001032814.1, SO:0001217, UniParc:UPI00000543E7, UniRef:UniRef100_Q2G1X3, UniRef:UniRef50_Q2G1X3, UniRef:UniRef90_Q2G1X3 contig_1 cds 1173622 1173855 - GCA000560365_01132 Phage protein RefSeq:WP_000231632.1, SO:0001217, UniParc:UPI00000543E6, UniRef:UniRef100_Q2G1X1, UniRef:UniRef50_Q2G1X1, UniRef:UniRef90_Q2G1X1 contig_1 cds 1174332 1175291 - GCA000560365_01133 hyl alpha-hemolysin BlastRules:WP_000857483, GO:0005576, GO:0042802, GO:0051715, GO:0090729, KEGG:K11032, RefSeq:WP_000857483.1, SO:0001217, UniParc:UPI00004B5BAF, UniRef:UniRef100_Q2G1X0, UniRef:UniRef50_P09616, UniRef:UniRef90_P09616 contig_1 cds 1175964 1176110 + GCA000560365_01134 Lmo0937 family membrane protein RefSeq:WP_000765708.1, SO:0001217, UniParc:UPI00000543E3, UniRef:UniRef100_Q2G1X4, UniRef:UniRef50_A0AAE2ZVL9, UniRef:UniRef90_Q2G1X4 contig_1 cds 1176094 1176291 + GCA000560365_01135 XRE family transcriptional regulator RefSeq:WP_000137801.1, SO:0001217, UniParc:UPI00000543E2, UniRef:UniRef100_Q2FZB4, UniRef:UniRef50_Q2FZB4, UniRef:UniRef90_Q2FZB4 contig_1 ncRNA 1176359 1176631 - GCA000560365_01136 S35 Staphylococcus sRNA 35 (srn_0335) RFAM:RF02894, SO:0000655 contig_1 cds 1176736 1177452 - GCA000560365_01137 superantigen-like protein SSL12 RefSeq:WP_000041896.1, SO:0001217, UniParc:UPI00004B5BB2, UniRef:UniRef100_Q2FZB3, UniRef:UniRef50_A0A0H3K7M3, UniRef:UniRef90_Q2FZB3 contig_1 cds 1177560 1178285 - GCA000560365_01138 ssl13 superantigen-like protein SSL13 GO:0005576, RefSeq:WP_001063559.1, SO:0001217, UniParc:UPI00000543E0, UniRef:UniRef100_A0A0H3K7M3, UniRef:UniRef50_A0A0H3K7M3, UniRef:UniRef90_A0A0H3K7M3 contig_1 cds 1178380 1179105 - GCA000560365_01139 superantigen-like protein SSL14 RefSeq:WP_000739523.1, SO:0001217, UniParc:UPI00000543DF, UniRef:UniRef100_Q2FZB1, UniRef:UniRef50_A0A0H3K7M3, UniRef:UniRef90_Q2FZB1 contig_1 cds 1179543 1180544 + GCA000560365_01140 argF ornithine carbamoyltransferase COG:COG0078, COG:E, EC:2.1.3.3, GO:0004585, GO:0005737, GO:0006526, GO:0016597, GO:0019240, GO:0042450, KEGG:K00611, RefSeq:WP_000793605.1, SO:0001217, UniParc:UPI00004B5BB3, UniRef:UniRef100_Q5HGR3, UniRef:UniRef50_P08308, UniRef:UniRef90_P0C0N0 contig_1 cds 1180564 1181499 + GCA000560365_01141 arcC carbamate kinase COG:COG0549, COG:E, EC:2.7.2.2, GO:0005524, GO:0005829, GO:0006520, GO:0008804, GO:0019546, SO:0001217, UniParc:UPI00006E412B, UniRef:UniRef100_A0A0D6HRT5, UniRef:UniRef50_Q2FZA9, UniRef:UniRef90_Q2FZA9 contig_1 cds 1181671 1183227 + GCA000560365_01142 yfcC ArcD-like protein COG:COG1288, COG:R, RefSeq:WP_000432077.1, SO:0001217, UniParc:UPI00000522D6, UniRef:UniRef100_H9BJB2, UniRef:UniRef50_P44023, UniRef:UniRef90_H9BJB2 contig_1 cds 1183535 1183762 + GCA000560365_01143 elxI1 epilancin biosynthesis-related protein ElxI1 RefSeq:WP_000149423.1, SO:0001217, UniParc:UPI00000543DB, UniRef:UniRef100_Q2FZA7, UniRef:UniRef50_I6ZHL4, UniRef:UniRef90_Q2FZA7 contig_1 cds 1184067 1185014 - GCA000560365_01144 tehA Permease COG:COG1275, COG:V, KEGG:K11041, RefSeq:WP_001239288.1, SO:0001217, UniParc:UPI0000696C13, UniRef:UniRef100_A0A0E8G6M5, UniRef:UniRef50_Q2FZA6, UniRef:UniRef90_Q2FZA6 contig_1 cds 1185263 1185451 + GCA000560365_01145 DNA-binding protein RefSeq:WP_001245802.1, SO:0001217, UniParc:UPI00000D9D8E, UniRef:UniRef100_Q2FZA5, UniRef:UniRef50_Q2FZA5, UniRef:UniRef90_Q2FZA5 contig_1 tRNA 1185926 1185999 - GCA000560365_01146 trnR tRNA-Arg(tct) SO:0001036 contig_1 cds 1186363 1186497 + GCA000560365_01147 Beta-class phenol-soluble modulin KEGG:K20337, RefSeq:WP_000398672.1, SO:0001217, UniParc:UPI00000D9D8F, UniRef:UniRef100_Q2FZA4, UniRef:UniRef50_P11697, UniRef:UniRef90_Q2FZA4 contig_1 cds 1186554 1186688 + GCA000560365_01148 Beta-class phenol-soluble modulin KEGG:K20337, RefSeq:WP_000147103.1, SO:0001217, UniParc:UPI00000543D5, UniRef:UniRef100_Q2FZA3, UniRef:UniRef50_P11697, UniRef:UniRef90_Q2FZA3 contig_1 cds 1186821 1187507 + GCA000560365_01149 yigB YjjG family noncanonical pyrimidine nucleotidase COG:COG1011, COG:H, EC:3.1.3.5, GO:0008253, SO:0001217, UniParc:UPI00000D76F2, UniRef:UniRef100_W8UYI1, UniRef:UniRef50_Q2FZA2, UniRef:UniRef90_Q2FZA2 contig_1 cds 1187616 1188056 - GCA000560365_01150 N-acetyltransferase EC:2.3.1.-, GO:0008080, GO:0016747, RefSeq:WP_001289711.1, SO:0001217, UniParc:UPI00000543D3, UniRef:UniRef100_Q99UT4, UniRef:UniRef50_Q8CSY0, UniRef:UniRef90_Q99UT4 contig_1 cds 1188251 1189864 + GCA000560365_01151 bshC bacillithiol biosynthesis cysteine-adding enzyme BshC COG:COG4365, COG:Q, EC:6.-.-.-, GO:0003824, GO:0016874, GO:0071793, KEGG:K22136, RefSeq:WP_000340475.1, SO:0001217, UniParc:UPI00000D9D90, UniRef:UniRef100_Q2FHR0, UniRef:UniRef50_Q2FZ98, UniRef:UniRef90_Q2FZ98 contig_1 cds 1190008 1190439 + GCA000560365_01152 mraZ division/cell wall cluster transcriptional repressor MraZ COG:COG2001, COG:J, GO:0000976, GO:0003700, GO:0005737, GO:0006355, GO:0009295, GO:2000143, RefSeq:WP_000480800.1, SO:0001217, UniParc:UPI00000543CE, UniRef:UniRef100_Q2FZ97, UniRef:UniRef50_Q8Y5L6, UniRef:UniRef90_Q2FZ97 contig_1 cds 1190455 1191390 + GCA000560365_01153 rsmH 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH COG:COG0275, COG:J, EC:2.1.1.199, GO:0005737, GO:0016434, GO:0070475, GO:0071424, KEGG:K03438, RefSeq:WP_000468384.1, SO:0001217, UniParc:UPI000012F4FC, UniRef:UniRef100_P60393, UniRef:UniRef50_Q07876, UniRef:UniRef90_P60393 contig_1 cds 1191404 1191805 + GCA000560365_01154 ftsL cell division protein FtsL COG:COG4839, COG:D, GO:0000910, GO:0005886, GO:0016020, GO:0032153, GO:0043093, KEGG:K03586, RefSeq:WP_000257598.1, SO:0001217, UniParc:UPI00000338FA, UniRef:UniRef100_Q2FZ95, UniRef:UniRef50_Q2FZ95, UniRef:UniRef90_Q2FZ95 contig_1 cds 1191786 1194020 + GCA000560365_01155 ftsI Cell division protein FtsI (Peptidoglycan synthetase) COG:COG2815, COG:M, EC:3.4.-.-, KEGG:K12552, RefSeq:WP_001118663.1, SO:0001217, UniParc:UPI00000543CC, UniRef:UniRef100_Q2FZ94, UniRef:UniRef50_A0A640MVC3, UniRef:UniRef90_A0A218M1I3 contig_1 cds 1194312 1195277 + GCA000560365_01156 mraY phospho-N-acetylmuramoyl-pentapeptide-transferase COG:COG0472, COG:M, EC:2.7.8.13, GO:0005886, GO:0008360, GO:0008963, GO:0009252, GO:0016020, GO:0046872, GO:0051301, GO:0051992, GO:0071555, KEGG:K01000, RefSeq:WP_000578458.1, SO:0001217, UniParc:UPI00000543CB, UniRef:UniRef100_Q2FZ93, UniRef:UniRef50_Q2FZ93, UniRef:UniRef90_Q2FZ93 contig_1 cds 1195279 1196628 + GCA000560365_01157 murD UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase COG:COG0771, COG:M, EC:6.3.2.9, GO:0005524, GO:0005737, GO:0008360, GO:0008764, GO:0009252, GO:0051301, GO:0071555, RefSeq:WP_000935991.1, SO:0001217, UniParc:UPI000012F989, UniRef:UniRef100_Q2FZ92, UniRef:UniRef50_Q2FZ92, UniRef:UniRef90_Q2FZ92 contig_1 cds 1196644 1197963 + GCA000560365_01158 divIB Cell division protein DivIB COG:COG1589, COG:D, GO:0005886, GO:0032153, GO:0043093, RefSeq:WP_000342185.1, SO:0001217, UniParc:UPI00000BE21A, UniRef:UniRef100_Q2FZ91, UniRef:UniRef50_Q2FZ91, UniRef:UniRef90_Q2FZ91 contig_1 cds 1198069 1199481 + GCA000560365_01159 ftsA cell division protein FtsA COG:COG0849, COG:D, GO:0005515, GO:0005524, GO:0009898, GO:0032153, GO:0043093, RefSeq:WP_000391031.1, SO:0001217, UniParc:UPI00000543C8, UniRef:UniRef100_O07325, UniRef:UniRef50_O07325, UniRef:UniRef90_O07325 contig_1 cds 1199514 1200686 + GCA000560365_01160 ftsZ cell division protein FtsZ COG:COG0206, COG:D, GO:0000910, GO:0000917, GO:0003924, GO:0005525, GO:0005737, GO:0032153, GO:0043093, GO:0051258, KEGG:K03531, RefSeq:WP_000888997.1, SO:0001217, UniParc:UPI00000543C7, UniRef:UniRef100_Q2FZ89, UniRef:UniRef50_Q2FZ89, UniRef:UniRef90_Q2FZ89 contig_1 cds 1200946 1201737 + GCA000560365_01161 pgeF peptidoglycan editing factor PgeF COG:COG1496, COG:P, EC:2.4.2.1, GO:0004000, GO:0005507, GO:0016491, GO:0017061, GO:0046936, KEGG:K05810, RefSeq:WP_000999338.1, SO:0001217, UniParc:UPI00004B5BB7, UniRef:UniRef100_Q5HGP4, UniRef:UniRef50_Q49WW9, UniRef:UniRef90_Q99US8 contig_1 cds 1201761 1202429 + GCA000560365_01162 yggS Pyridoxal phosphate homeostasis protein COG:COG0325, COG:H, RefSeq:WP_001548498.1, SO:0001217, UniParc:UPI0000696C16, UniRef:UniRef100_Q2FZ87, UniRef:UniRef50_U2FRM0, UniRef:UniRef90_Q9ZHA3 contig_1 cds 1202426 1202989 + GCA000560365_01163 sepF Cell division protein SepF COG:COG1799, COG:D, GO:0000917, GO:0005737, GO:0043093, RefSeq:WP_000018608.1, SO:0001217, UniParc:UPI00000D7683, UniRef:UniRef100_Q2FZ86, UniRef:UniRef50_Q2FZ86, UniRef:UniRef90_Q2FZ86 contig_1 cds 1203001 1203291 + GCA000560365_01164 yggT YggT family protein COG:COG0762, COG:O, KEGG:K02221, RefSeq:WP_000354114.1, SO:0001217, UniParc:UPI00000543C2, UniRef:UniRef100_Q2FZ85, UniRef:UniRef50_Q2FZ85, UniRef:UniRef90_Q2FZ85 contig_1 cds 1203374 1204180 + GCA000560365_01165 ylmH RNA-binding S4 domain-containing protein COG:COG2302, COG:J, RefSeq:WP_000232509.1, SO:0001217, UniParc:UPI00000543C1, UniRef:UniRef100_Q2FZ84, UniRef:UniRef50_Q2FZ84, UniRef:UniRef90_Q2FZ84 contig_1 cds 1204204 1204821 + GCA000560365_01166 divIVA DivIVA domain-containing protein COG:COG3599, COG:D, RefSeq:WP_001117064.1, SO:0001217, UniParc:UPI00000543C0, UniRef:UniRef100_Q2FZ83, UniRef:UniRef50_Q2FZ83, UniRef:UniRef90_Q2FZ83 contig_1 cds 1205042 1207795 + GCA000560365_01167 ileS isoleucine--tRNA ligase COG:COG0060, COG:J, EC:6.1.1.5, GO:0000049, GO:0000166, GO:0002161, GO:0004822, GO:0005524, GO:0005829, GO:0006428, GO:0008270, RefSeq:WP_000384691.1, SO:0001217, UniParc:UPI00000CABC4, UniRef:UniRef100_Q2FZ82, UniRef:UniRef50_P41972, UniRef:UniRef90_P41972 contig_1 cds 1208085 1208882 + GCA000560365_01168 catE Glyoxalase COG:COG2514, COG:Q, RefSeq:WP_000274844.1, SO:0001217, UniParc:UPI00000543BE, UniRef:UniRef100_Q2FZ81, UniRef:UniRef50_A0AAP7IFI2, UniRef:UniRef90_A0A0D1JNZ5 contig_1 cds 1208943 1209137 - GCA000560365_01169 Truncated transposase for IS1272 SO:0001217, UniParc:UPI0001C14C6C, UniRef:UniRef100_A0A0D6HS26, UniRef:UniRef50_Q4L350, UniRef:UniRef90_A0A0H3K9W4 contig_1 ncRNA 1209149 1209381 + GCA000560365_01170 tsr24 S. aureus tsr24 small RNA RFAM:RF02577, SO:0000655 contig_1 cds 1209706 1210197 + GCA000560365_01171 lspA signal peptidase II COG:COG0597, COG:MU, EC:3.4.23.36, GO:0004190, GO:0005886, GO:0006508, GO:0009306, KEGG:K03101, RefSeq:WP_000549207.1, SO:0001217, UniParc:UPI00000D7816, UniRef:UniRef100_Q2FZ79, UniRef:UniRef50_Q8CPK0, UniRef:UniRef90_Q6GHN9 contig_1 cds 1210197 1211114 + GCA000560365_01172 rluA Pseudouridine synthase COG:COG0564, COG:J, EC:5.4.99.23, KEGG:K06180, RefSeq:WP_000451295.1, SO:0001217, UniParc:UPI0000696C17, UniRef:UniRef100_A0A1S5Z2V6, UniRef:UniRef50_A5I1V5, UniRef:UniRef90_A0A380EGR6 contig_1 cds 1211513 1212040 + GCA000560365_01173 pyrR bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR COG:COG2065, COG:F, EC:2.4.2.9, GO:0003723, GO:0004845, GO:0006353, KEGG:K02825, RefSeq:WP_000003870.1, SO:0001217, UniParc:UPI00000543B9, UniRef:UniRef100_Q2FZ77, UniRef:UniRef50_Q9K9V4, UniRef:UniRef90_Q2FZ77 contig_1 cds 1212258 1213565 + GCA000560365_01174 uraA Uracil permease, putative COG:COG2233, COG:F, RefSeq:WP_001178619.1, SO:0001217, UniParc:UPI00000D7719, UniRef:UniRef100_Q2FZ76, UniRef:UniRef50_P39766, UniRef:UniRef90_Q2FZ76 contig_1 cds 1213593 1214474 + GCA000560365_01175 pyrB aspartate carbamoyltransferase catalytic subunit COG:COG0540, COG:F, EC:2.1.3.2, GO:0004070, GO:0005829, GO:0006207, GO:0006520, GO:0016597, GO:0044205, RefSeq:WP_001016166.1, SO:0001217, UniParc:UPI00000543B7, UniRef:UniRef100_Q2FZ75, UniRef:UniRef50_P05654, UniRef:UniRef90_Q2FZ75 contig_1 cds 1214489 1215766 + GCA000560365_01176 pyrC dihydroorotase COG:COG0044, COG:F, EC:3.5.2.3, GO:0004038, GO:0004151, GO:0005737, GO:0006145, GO:0006221, GO:0008270, GO:0044205, GO:0046872, SO:0001217, UniParc:UPI00000543B6, UniRef:UniRef100_Q5HGN1, UniRef:UniRef50_Q81WF0, UniRef:UniRef90_Q5HGN1 contig_1 cds 1215768 1216868 + GCA000560365_01177 carA carbamoyl phosphate synthase small subunit COG:COG0505, COG:EF, EC:6.3.5.5, GO:0004088, GO:0004359, GO:0005524, GO:0006207, GO:0006526, GO:0006541, GO:0044205, RefSeq:WP_001190913.1, SO:0001217, UniParc:UPI00000543B5, UniRef:UniRef100_Q5HGN0, UniRef:UniRef50_P25993, UniRef:UniRef90_Q5HGN0 contig_1 cds 1216861 1220034 + GCA000560365_01178 carB carbamoyl-phosphate synthase large subunit COG:COG0458, COG:EF, EC:6.3.4.16, EC:6.3.5.5, GO:0004087, GO:0004088, GO:0005524, GO:0005737, GO:0006526, GO:0006541, GO:0008152, GO:0044205, GO:0046872, KEGG:K01955, RefSeq:WP_001126264.1, SO:0001217, UniParc:UPI0000052291, UniRef:UniRef100_Q2FZ72, UniRef:UniRef50_P25994, UniRef:UniRef90_P63739 contig_1 cds 1220144 1220836 + GCA000560365_01179 pyrF orotidine-5'-phosphate decarboxylase COG:COG0284, COG:F, EC:4.1.1.23, GO:0004590, GO:0005829, GO:0006207, GO:0044205, RefSeq:WP_000654061.1, SO:0001217, UniParc:UPI00004B5BB9, UniRef:UniRef100_Q2FZ71, UniRef:UniRef50_P0CB75, UniRef:UniRef90_Q2FZ71 contig_1 cds 1220836 1221447 + GCA000560365_01180 pyrE Orotate phosphoribosyltransferase COG:COG0461, COG:F, EC:2.4.2.10, GO:0000287, GO:0004588, GO:0019856, GO:0044205, RefSeq:WP_001040245.1, SO:0001217, UniParc:UPI00004B5BBA, UniRef:UniRef100_Q5HGM7, UniRef:UniRef50_P58856, UniRef:UniRef90_P65916 contig_1 cds 1221477 1221689 + GCA000560365_01181 hypothetical protein RefSeq:WP_000998556.1, SO:0001217, UniParc:UPI00004B5BBB, UniRef:UniRef100_A0A0E7KPZ9, UniRef:UniRef50_A0A2K4ADL6, UniRef:UniRef90_Q2FZ69 contig_1 cds 1222126 1222527 + GCA000560365_01182 PhnB-like domain-containing protein COG:COG3865, COG:R, RefSeq:WP_000354184.1, SO:0001217, UniParc:UPI00000543B0, UniRef:UniRef100_Q2G1U2, UniRef:UniRef50_Q2G1U2, UniRef:UniRef90_Q2G1U2 contig_1 cds 1222790 1224487 - GCA000560365_01183 rqcH Rqc2-like protein RqcH COG:COG1293, COG:JO, RefSeq:WP_000312763.1, SO:0001217, UniParc:UPI0000696C18, UniRef:UniRef100_A0A0E8GCM1, UniRef:UniRef50_Q5HPY2, UniRef:UniRef90_A0A0U1MIQ6 contig_1 cds 1224762 1225385 + GCA000560365_01184 gmk guanylate kinase EC:2.7.4.8, GO:0004385, GO:0005524, GO:0005829, GO:0006163, RefSeq:WP_000368227.1, SO:0001217, UniParc:UPI00000543AE, UniRef:UniRef100_Q2G1U0, UniRef:UniRef50_Q8Y672, UniRef:UniRef90_Q2G1U0 contig_1 cds 1225385 1225603 + GCA000560365_01185 rpoZ DNA-directed RNA polymerase subunit omega COG:COG1758, COG:K, EC:2.7.7.6, GO:0000428, GO:0001054, GO:0001055, GO:0001056, GO:0001057, GO:0001058, GO:0001066, GO:0003677, GO:0003899, GO:0006351, RefSeq:WP_000933956.1, SO:0001217, UniParc:UPI00000543AD, UniRef:UniRef100_Q2G1T9, UniRef:UniRef50_Q2G1T9, UniRef:UniRef90_Q2G1T9 contig_1 cds 1225819 1227018 + GCA000560365_01186 coaBC bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC COG:COG0452, COG:H, EC:4.1.1.36, EC:6.3.2.5, GO:0004632, GO:0004633, GO:0010181, GO:0015937, GO:0015941, RefSeq:WP_031808143.1, SO:0001217, UniParc:UPI000450029B, UniRef:UniRef100_UPI000450029B, UniRef:UniRef50_W4QPQ9, UniRef:UniRef90_Q2G268 contig_1 cds 1227018 1229426 + GCA000560365_01187 priA primosomal protein N' COG:COG1198, COG:L, EC:3.6.1.-, GO:0003678, GO:0006260, GO:0032508, RefSeq:WP_000560841.1, SO:0001217, UniParc:UPI00004B5BBD, UniRef:UniRef100_Q2G266, UniRef:UniRef50_A0A0B8RHA5, UniRef:UniRef90_A0A7Z7W1D5 contig_1 cds 1229932 1230885 + GCA000560365_01188 Lipoprotein RefSeq:WP_000751704.1, SO:0001217, UniParc:UPI00000543AA, UniRef:UniRef100_Q2G264, UniRef:UniRef50_Q2G264, UniRef:UniRef90_Q2G264 contig_1 cds 1231048 1231326 - GCA000560365_01189 tM2 TM2 domain-containing protein COG:COG2314, COG:R, RefSeq:WP_001548522.1, SO:0001217, UniParc:UPI00000543A8, UniRef:UniRef100_Q2G267, UniRef:UniRef50_Q2G267, UniRef:UniRef90_Q2G267 contig_1 cds 1231550 1232038 + GCA000560365_01190 def peptide deformylase COG:COG0242, COG:J, EC:3.5.1.88, GO:0006412, GO:0042586, GO:0043686, KEGG:K01462, RefSeq:WP_000985293.1, SO:0001217, UniParc:UPI00000543A7, UniRef:UniRef100_Q5HGL7, UniRef:UniRef50_Q5HPX6, UniRef:UniRef90_Q5HGL7 contig_1 cds 1232031 1232966 + GCA000560365_01191 fmt methionyl-tRNA formyltransferase COG:COG0223, COG:J, EC:2.1.2.9, GO:0004479, GO:0005737, GO:0005829, GO:0071951, RefSeq:WP_000161299.1, SO:0001217, UniParc:UPI00000543A6, UniRef:UniRef100_Q2FZ68, UniRef:UniRef50_P94463, UniRef:UniRef90_Q2FZ68 contig_1 cds 1232963 1234270 + GCA000560365_01192 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB COG:COG0781, COG:K, EC:2.1.1.176, GO:0001510, GO:0003723, GO:0006355, GO:0008168, KEGG:K03500, RefSeq:WP_000572235.1, SO:0001217, UniParc:UPI00004B5BBE, UniRef:UniRef100_A0A0H3JKS7, UniRef:UniRef50_A0A2T4MK73, UniRef:UniRef90_A0A7U7JU44 contig_1 cds 1234273 1235367 + GCA000560365_01193 rlmN 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN COG:COG0820, COG:J, EC:2.1.1.192, GO:0000049, GO:0002935, GO:0005737, GO:0008757, GO:0016433, GO:0019843, GO:0030488, GO:0046677, GO:0046872, GO:0051539, GO:0070040, GO:0070475, KEGG:K06941, RefSeq:WP_000626897.1, SO:0001217, UniParc:UPI00000543A4, UniRef:UniRef100_Q2FZ66, UniRef:UniRef50_O34617, UniRef:UniRef90_Q2FZ66 contig_1 cds 1235374 1236117 + GCA000560365_01194 pTC1 protein-serine/threonine phosphatase Stp1 BlastRules:WP_000888494, COG:COG0631, COG:T, EC:3.1.3.16, GO:0004722, GO:0006470, KEGG:K20074, RefSeq:WP_000888494.1, SO:0001217, UniParc:UPI00000543A3, UniRef:UniRef100_Q2FZ65, UniRef:UniRef50_A0A0D0SSN4, UniRef:UniRef90_A0A7U7PY84 contig_1 cds 1236114 1238108 + GCA000560365_01195 pknB serine/threonine protein kinase Stk1 BlastRules:WP_000579564, COG:COG2815, COG:M, EC:2.7.11.1, GO:0004672, GO:0004674, GO:0004676, GO:0004677, GO:0004679, GO:0004711, GO:0005524, GO:0005886, GO:0006468, GO:0007165, GO:0009847, GO:0035175, GO:0035402, GO:0035403, GO:0035979, GO:0042834, GO:0044022, GO:0044023, GO:0044024, GO:0044025, GO:0071224, GO:0072354, GO:0072371, GO:0072518, GO:0106310, GO:0140823, GO:0140855, GO:0140857, GO:1990244, RefSeq:WP_000579564.1, SO:0001217, UniParc:UPI00000543A2, UniRef:UniRef100_A6QGC0, UniRef:UniRef50_A6QGC0, UniRef:UniRef90_A6QGC0 contig_1 cds 1238336 1239211 + GCA000560365_01196 rsgA ribosome small subunit-dependent GTPase A COG:COG1162, COG:J, EC:3.6.1.-, GO:0003924, GO:0005525, GO:0005737, GO:0006412, GO:0019843, GO:0042274, GO:0043022, GO:0046872, KEGG:K06949, RefSeq:WP_000847933.1, SO:0001217, UniParc:UPI00000B66AD, UniRef:UniRef100_Q9KX08, UniRef:UniRef50_Q8CSV8, UniRef:UniRef90_Q9KX08 contig_1 cds 1239212 1239856 + GCA000560365_01197 rpe ribulose-phosphate 3-epimerase COG:COG0036, COG:G, EC:5.1.3.1, GO:0004750, GO:0006098, KEGG:K01783, RefSeq:WP_000164332.1, SO:0001217, UniParc:UPI00000543A0, UniRef:UniRef100_Q2FZ62, UniRef:UniRef50_A0A931T8B0, UniRef:UniRef90_Q2FZ62 contig_1 cds 1239863 1240504 + GCA000560365_01198 thiN thiamine diphosphokinase COG:COG1564, COG:H, EC:2.7.6.2, GO:0004788, GO:0006772, KEGG:K00949, RefSeq:WP_000547905.1, SO:0001217, UniParc:UPI00000D9DA1, UniRef:UniRef100_Q2FZ61, UniRef:UniRef50_A0A380G740, UniRef:UniRef90_A0A3A5LHB3 contig_1 cds 1240885 1241073 - GCA000560365_01199 rpmB 50S ribosomal protein L28 COG:COG0227, COG:J, GO:0003735, GO:0005840, GO:0006412, GO:1990904, RefSeq:WP_000517908.1, SO:0001217, UniParc:UPI000005439D, UniRef:UniRef100_Q2FZ60, UniRef:UniRef50_Q82ZE4, UniRef:UniRef90_Q49X05 contig_1 cds 1241516 1241890 + GCA000560365_01200 yloU Alkaline shock protein 23 COG:COG1302, COG:S, RefSeq:WP_000171418.1, SO:0001217, UniParc:UPI00000D7669, UniRef:UniRef100_Q2FZ59, UniRef:UniRef50_O34318, UniRef:UniRef90_A0A7U7JU57 contig_1 cds 1241905 1243551 + GCA000560365_01201 fakA fatty acid kinase catalytic subunit FakA COG:COG1461, COG:I, GO:0004371, GO:0006071, RefSeq:WP_000623903.1, SO:0001217, UniParc:UPI00000CAC97, UniRef:UniRef100_Q2FZ58, UniRef:UniRef50_O34751, UniRef:UniRef90_Q2FZ58 contig_1 cds 1243741 1245801 + GCA000560365_01202 recG ATP-dependent DNA helicase RecG COG:COG1200, COG:L, EC:3.6.4.12, EC:5.6.2.4, GO:0003676, GO:0003677, GO:0003678, GO:0003689, GO:0005524, GO:0006281, GO:0006310, GO:0009378, GO:0016853, GO:0016887, GO:0036121, GO:0061749, GO:0061775, GO:0140584, GO:0140665, GO:0140849, GO:1990518, KEGG:K03655, RefSeq:WP_001151499.1, SO:0001217, UniParc:UPI000013357F, UniRef:UniRef100_O50581, UniRef:UniRef50_O50581, UniRef:UniRef90_O50581 contig_1 cds 1246004 1246576 + GCA000560365_01203 fapR transcription factor FapR COG:COG2050, COG:Q, GO:0003677, GO:0003700, GO:0006633, GO:0045717, GO:0045892, RefSeq:WP_001548538.1, SO:0001217, UniParc:UPI0000054B2F, UniRef:UniRef100_Q2FZ56, UniRef:UniRef50_Q4L5T0, UniRef:UniRef90_Q5HGK5 contig_1 cds 1246581 1247567 + GCA000560365_01204 plsX phosphate acyltransferase PlsX COG:COG0416, COG:I, EC:2.3.1.274, GO:0005737, GO:0006633, GO:0008610, GO:0008654, GO:0043811, KEGG:K03621, RefSeq:WP_000239744.1, SO:0001217, UniParc:UPI0000050D3F, UniRef:UniRef100_Q2FZ55, UniRef:UniRef50_P71018, UniRef:UniRef90_Q2FZ55 contig_1 cds 1247560 1248486 + GCA000560365_01205 fabD ACP S-malonyltransferase COG:COG0331, COG:I, EC:2.3.1.39, GO:0004314, GO:0005829, GO:0006633, RefSeq:WP_000047348.1, SO:0001217, UniParc:UPI00000BDE3F, UniRef:UniRef100_Q5HGK3, UniRef:UniRef50_Q99UN8, UniRef:UniRef90_Q99UN8 contig_1 cds 1248479 1249213 + GCA000560365_01206 fabG 3-oxoacyl-[acyl-carrier-protein] reductase COG:COG1028, COG:I, EC:1.1.1.100, GO:0004316, GO:0006633, GO:0030497, GO:0050661, GO:0051287, RefSeq:WP_000167269.1, SO:0001217, UniParc:UPI00004B5BBF, UniRef:UniRef100_Q2FZ53, UniRef:UniRef50_Q5HGK2, UniRef:UniRef90_Q5HGK2 contig_1 cds 1249456 1249689 + GCA000560365_01207 acpP acyl carrier protein COG:COG0236, COG:I, GO:0000035, GO:0000036, GO:0005829, GO:0006633, GO:0009245, GO:0016020, GO:0046677, RefSeq:WP_000426914.1, SO:0001217, UniParc:UPI0000125385, UniRef:UniRef100_Q2FZ51, UniRef:UniRef50_Q2FZ51, UniRef:UniRef90_Q2FZ51 contig_1 cds 1249805 1250536 + GCA000560365_01208 rnc ribonuclease III COG:COG0571, COG:K, EC:3.1.26.3, GO:0003723, GO:0003725, GO:0004525, GO:0005829, GO:0006364, GO:0006396, GO:0006397, GO:0008033, GO:0010468, GO:0019843, GO:0046872, RefSeq:WP_000043237.1, SO:0001217, UniParc:UPI0000054AFA, UniRef:UniRef100_Q2FZ50, UniRef:UniRef50_Q2FZ50, UniRef:UniRef90_Q2FZ50 contig_1 cds 1250683 1254249 + GCA000560365_01209 smc chromosome segregation protein SMC COG:COG1196, COG:D, GO:0005524, GO:0007059, GO:0030261, KEGG:K03529, RefSeq:WP_000262704.1, SO:0001217, UniParc:UPI00004B5BC1, UniRef:UniRef100_Q2FZ49, UniRef:UniRef50_A0A380G9C6, UniRef:UniRef90_A0A2I7Y681 contig_1 cds 1254249 1255499 + GCA000560365_01210 ftsY signal recognition particle-docking protein FtsY COG:COG0552, COG:U, GO:0003924, GO:0005047, GO:0006614, GO:0009306, KEGG:K03110, RefSeq:WP_000007683.1, SO:0001217, UniParc:UPI00000522D7, UniRef:UniRef100_Q2FZ48, UniRef:UniRef50_Q2FZ48, UniRef:UniRef90_Q2FZ48 contig_1 cds 1255486 1255818 + GCA000560365_01211 ylxM putative DNA-binding protein COG:COG2739, COG:K, RefSeq:WP_000531320.1, SO:0001217, UniParc:UPI0000054ACF, UniRef:UniRef100_Q2FZ47, UniRef:UniRef50_Q2FZ47, UniRef:UniRef90_Q2FZ47 contig_1 cds 1255844 1257211 + GCA000560365_01212 ffh signal recognition particle protein COG:COG0541, COG:U, GO:0003924, GO:0005048, GO:0005525, GO:0009306, GO:0048501, RefSeq:WP_000863479.1, SO:0001217, UniParc:UPI00000D9DA6, UniRef:UniRef100_Q2FZ46, UniRef:UniRef50_P37105, UniRef:UniRef90_A0A7Z7QZ67 contig_1 cds 1257646 1257921 + GCA000560365_01213 rpsP 30S ribosomal protein S16 COG:COG0228, COG:J, GO:0000314, GO:0003735, GO:0005737, GO:0006412, GO:0015935, GO:0022627, RefSeq:WP_000268754.1, SO:0001217, UniParc:UPI0000134D53, UniRef:UniRef100_Q2FZ45, UniRef:UniRef50_Q2FZ45, UniRef:UniRef90_Q2FZ45 contig_1 cds 1258109 1258612 + GCA000560365_01214 rimM ribosome maturation factor RimM COG:COG0806, COG:J, GO:0005737, GO:0005840, GO:0006364, GO:0042274, GO:0043022, RefSeq:WP_031808144.1, SO:0001217, UniParc:UPI00044FB4C1, UniRef:UniRef100_UPI00044FB4C1, UniRef:UniRef50_Q2FZ44, UniRef:UniRef90_Q2FZ44 contig_1 cds 1258612 1259349 + GCA000560365_01215 trmD tRNA (guanosine(37)-N1)-methyltransferase TrmD COG:COG0336, COG:J, EC:2.1.1.228, GO:0002939, GO:0005829, GO:0008033, GO:0052906, RefSeq:WP_000687328.1, SO:0001217, UniParc:UPI000013742B, UniRef:UniRef100_Q2FZ43, UniRef:UniRef50_Q6GHJ5, UniRef:UniRef90_Q6GHJ5 contig_1 ncRNA-region 1259390 1259432 + Ribosomal protein L19 leader RFAM:RF00556, SO:0000140 contig_1 cds 1259452 1259802 + GCA000560365_01216 rplS 50S ribosomal protein L19 COG:COG0335, COG:J, GO:0000311, GO:0003735, GO:0006412, GO:0022625, KEGG:K02884, RefSeq:WP_000181404.1, SO:0001217, UniParc:UPI0000054AE5, UniRef:UniRef100_Q2FZ42, UniRef:UniRef50_Q8EWU9, UniRef:UniRef90_Q2FZ42 contig_1 cds 1260046 1262652 - GCA000560365_01217 yfhO lipoteichoic acid-specific glycosyltransferase YfhO BlastRules:WP_000915229, COG:COG4485, COG:S, KEGG:K25619, RefSeq:WP_000915229.1, SO:0001217, UniParc:UPI00000522D8, UniRef:UniRef100_Q2FZ40, UniRef:UniRef50_Q2FZ40, UniRef:UniRef90_Q2FZ40 contig_1 cds 1263053 1263937 + GCA000560365_01218 ylqF ribosome biogenesis GTPase YlqF COG:COG1161, COG:J, GO:0003924, GO:0005525, GO:0005737, GO:0042254, RefSeq:WP_000236722.1, SO:0001217, UniParc:UPI0000054AE2, UniRef:UniRef100_Q2FZ39, UniRef:UniRef50_A0A3G6UNR5, UniRef:UniRef90_A0A389V7Z2 contig_1 cds 1263921 1264688 + GCA000560365_01219 rnhB ribonuclease HII COG:COG0164, COG:L, EC:3.1.26.4, GO:0003723, GO:0004523, GO:0005737, GO:0006298, GO:0030145, GO:0032299, GO:0043137, KEGG:K03470, RefSeq:WP_000176394.1, SO:0001217, UniParc:UPI0000054AE1, UniRef:UniRef100_Q2FZ38, UniRef:UniRef50_Q6GHJ1, UniRef:UniRef90_Q6GHJ1 contig_1 cds 1264797 1265963 + GCA000560365_01220 sucC ADP-forming succinate--CoA ligase subunit beta COG:C, COG:COG0045, EC:6.2.1.5, GO:0000287, GO:0003824, GO:0004775, GO:0004776, GO:0005524, GO:0005829, GO:0006099, GO:0006104, GO:0042709, GO:0046872, RefSeq:WP_001020801.1, SO:0001217, UniParc:UPI0000054AE0, UniRef:UniRef100_Q2FZ37, UniRef:UniRef50_Q8UC60, UniRef:UniRef90_Q2FZ37 contig_1 cds 1265985 1266893 + GCA000560365_01221 sucD succinate--CoA ligase subunit alpha COG:C, COG:COG0074, EC:6.2.1.5, GO:0000166, GO:0003824, GO:0004775, GO:0004776, GO:0005829, GO:0006099, GO:0009361, RefSeq:WP_000110253.1, SO:0001217, UniParc:UPI0000054ADF, UniRef:UniRef100_Q5HGI6, UniRef:UniRef50_P80865, UniRef:UniRef90_Q5HPU4 contig_1 cds 1267120 1268238 + GCA000560365_01222 lytN putative cell wall hydrolase LytN COG:COG1388, COG:M, EC:3.-.-.-, GO:0005576, GO:0008932, GO:0016787, GO:0071555, RefSeq:WP_001041662.1, SO:0001217, UniParc:UPI0000054ADE, UniRef:UniRef100_Q9ZNI1, UniRef:UniRef50_Q9ZNI1, UniRef:UniRef90_Q9ZNI1 contig_1 cds 1268266 1269510 + GCA000560365_01223 fmhC FemA/FemB family glycyltransferase FmhC BlastRules:WP_100495214, COG:COG2348, COG:M, RefSeq:WP_000672867.1, SO:0001217, UniParc:UPI0000054ADD, UniRef:UniRef100_Q2FZ34, UniRef:UniRef50_B9DMC1, UniRef:UniRef90_A0A380DRS9 contig_1 cds 1269683 1270555 + GCA000560365_01224 dprA DNA-processing protein DprA COG:COG0758, COG:L, GO:0009294, RefSeq:WP_000593192.1, SO:0001217, UniParc:UPI00000D9DAB, UniRef:UniRef100_A0A140HKN1, UniRef:UniRef50_A0A140HKN1, UniRef:UniRef90_A0A140HKN1 contig_1 cds 1270729 1272804 + GCA000560365_01225 topA type I DNA topoisomerase COG:COG0551, COG:L, EC:5.6.2.1, GO:0003677, GO:0003917, GO:0005694, GO:0005737, GO:0006260, GO:0006265, GO:0046872, KEGG:K03168, RefSeq:WP_001548566.1, SO:0001217, UniParc:UPI0000054ADB, UniRef:UniRef100_A0A0D6HS19, UniRef:UniRef50_Q9CG80, UniRef:UniRef90_Q2FZ32 contig_1 cds 1272960 1274267 + GCA000560365_01226 trmFO methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO COG:COG1206, COG:J, EC:2.1.1.74, GO:0002098, GO:0005829, GO:0008033, GO:0030488, GO:0047151, GO:0050660, KEGG:K04094, RefSeq:WP_000195254.1, SO:0001217, UniParc:UPI0000054AD9, UniRef:UniRef100_Q2FZ31, UniRef:UniRef50_Q2FZ31, UniRef:UniRef90_Q2FZ31 contig_1 cds 1274684 1275580 + GCA000560365_01227 xerC tyrosine recombinase XerC COG:COG4974, COG:L, GO:0003677, GO:0005737, GO:0006310, GO:0006313, GO:0007059, GO:0009037, GO:0015074, GO:0051301, RefSeq:WP_001015597.1, SO:0001217, UniParc:UPI00004B5BC4, UniRef:UniRef100_Q2FZ30, UniRef:UniRef50_Q2FZ30, UniRef:UniRef90_Q2FZ30 contig_1 cds 1275577 1276122 + GCA000560365_01228 hslV ATP-dependent protease subunit HslV COG:COG5405, COG:O, EC:3.4.25.2, GO:0004298, GO:0005839, GO:0009376, GO:0046872, GO:0051603, KEGG:K01419, RefSeq:WP_000072681.1, SO:0001217, UniParc:UPI0000054AD7, UniRef:UniRef100_Q2FZ29, UniRef:UniRef50_Q2FZ29, UniRef:UniRef90_Q2FZ29 contig_1 cds 1276188 1277591 + GCA000560365_01229 hslU ATP-dependent protease ATPase subunit HslU COG:COG1220, COG:O, EC:3.4.25.2, GO:0005524, GO:0008233, GO:0009376, GO:0016887, GO:0036402, GO:0043335, GO:0051603, RefSeq:WP_031808145.1, SO:0001217, UniParc:UPI00044730B8, UniRef:UniRef100_UPI00044730B8, UniRef:UniRef50_P63796, UniRef:UniRef90_P63796 contig_1 cds 1277616 1278389 + GCA000560365_01230 codY GTP-sensing pleiotropic transcriptional regulator CodY COG:COG4465, COG:K, GO:0003677, GO:0003700, GO:0005525, GO:0005737, GO:0045892, KEGG:K03706, RefSeq:WP_000055337.1, SO:0001217, UniParc:UPI0000054AD5, UniRef:UniRef100_Q2FZ27, UniRef:UniRef50_P39779, UniRef:UniRef90_Q2FZ27 contig_1 cds 1278731 1279498 + GCA000560365_01231 rpsB 30S ribosomal protein S2 COG:COG0052, COG:J, GO:0003735, GO:0006412, GO:0015935, GO:0022627, KEGG:K02967, RefSeq:WP_000268484.1, SO:0001217, UniParc:UPI0000134F21, UniRef:UniRef100_Q2FZ25, UniRef:UniRef50_P21464, UniRef:UniRef90_Q2FZ25 contig_1 cds 1279680 1280561 + GCA000560365_01232 tsf translation elongation factor Ts COG:COG0264, COG:J, GO:0003746, GO:0005737, GO:0006414, RefSeq:WP_000201387.1, SO:0001217, UniParc:UPI0000054ACE, UniRef:UniRef100_Q2FZ23, UniRef:UniRef50_Q2FZ23, UniRef:UniRef90_Q2FZ23 contig_1 cds 1280698 1281420 + GCA000560365_01233 pyrH UMP kinase COG:COG0528, COG:F, EC:2.7.4.22, GO:0005524, GO:0005737, GO:0006221, GO:0006225, GO:0015949, GO:0033862, GO:0044210, RefSeq:WP_000057330.1, SO:0001217, UniParc:UPI0000132DC0, UniRef:UniRef100_Q2FZ22, UniRef:UniRef50_O31749, UniRef:UniRef90_Q2FZ22 contig_1 cds 1281439 1281993 + GCA000560365_01234 frr ribosome recycling factor COG:COG0233, COG:J, GO:0005737, GO:0006412, GO:0006415, GO:0008135, GO:0043023, RefSeq:WP_001280006.1, SO:0001217, UniParc:UPI0000054ACC, UniRef:UniRef100_Q2FZ21, UniRef:UniRef50_Q2FZ21, UniRef:UniRef90_Q2FZ21 contig_1 cds 1282366 1283136 + GCA000560365_01235 uppS isoprenyl transferase COG:COG0020, COG:I, EC:2.5.1.-, GO:0000287, GO:0005829, GO:0008834, GO:0016094, GO:0016765, GO:0030145, GO:0045547, RefSeq:WP_000473705.1, SO:0001217, UniParc:UPI00000D9DAE, UniRef:UniRef100_Q5HGH1, UniRef:UniRef50_Q8DRB3, UniRef:UniRef90_P60476 contig_1 cds 1283143 1283925 + GCA000560365_01236 cdsA Phosphatidate cytidylyltransferase COG:COG0575, COG:I, EC:2.7.7.41, GO:0004605, GO:0005886, GO:0016024, KEGG:K00981, RefSeq:WP_000868413.1, SO:0001217, UniParc:UPI0000054ACA, UniRef:UniRef100_Q5HGH0, UniRef:UniRef50_Q49X46, UniRef:UniRef90_Q5HGH0 contig_1 cds 1284187 1285473 + GCA000560365_01237 rseP RIP metalloprotease RseP COG:COG0750, COG:OK, EC:3.4.24.-, GO:0004222, GO:0005886, GO:0006508, GO:0016020, GO:0046872, RefSeq:WP_000121116.1, SO:0001217, UniParc:UPI00004B5BC6, UniRef:UniRef100_Q5HGG9, UniRef:UniRef50_P63333, UniRef:UniRef90_P63333 contig_1 cds 1285493 1287196 + GCA000560365_01238 proS proline--tRNA ligase COG:COG0442, COG:J, EC:6.1.1.15, GO:0000166, GO:0002161, GO:0004812, GO:0004827, GO:0005524, GO:0005829, GO:0006418, GO:0006433, GO:0016740, KEGG:K01881, RefSeq:WP_000814103.1, SO:0001217, UniParc:UPI0000054AC8, UniRef:UniRef100_Q2G1Z4, UniRef:UniRef50_Q2G1Z4, UniRef:UniRef90_Q2G1Z4 contig_1 cds 1287454 1291770 + GCA000560365_01239 polC PolC-type DNA polymerase III COG:COG2176, COG:L, EC:2.7.7.7, GO:0003677, GO:0003887, GO:0005737, GO:0006260, GO:0006261, GO:0008408, KEGG:K03763, SO:0001217, UniParc:UPI0000167805, UniRef:UniRef100_Q2G1Z8, UniRef:UniRef50_Q2G1Z8, UniRef:UniRef90_Q2G1Z8 contig_1 cds 1292060 1292527 + GCA000560365_01240 rimP ribosome maturation factor RimP COG:COG0779, COG:J, GO:0000028, GO:0005829, GO:0006412, GO:0042274, RefSeq:WP_000036631.1, SO:0001217, UniParc:UPI00000D9DB0, UniRef:UniRef100_Q2G2D3, UniRef:UniRef50_P32726, UniRef:UniRef90_Q2G2D3 contig_1 cds 1292548 1293723 + GCA000560365_01241 nusA Transcription termination/antitermination protein NusA COG:COG0195, COG:K, RefSeq:WP_000097462.1, SO:0001217, UniParc:UPI00004B5BC8, UniRef:UniRef100_Q2G2D2, UniRef:UniRef50_K9AT72, UniRef:UniRef90_Q2G2D2 contig_1 cds 1293744 1294028 + GCA000560365_01242 rnpM RNase P modulator RnpM COG:AJ, COG:COG2740, KEGG:K07742, RefSeq:WP_000727423.1, SO:0001217, UniParc:UPI0000054AC3, UniRef:UniRef100_Q2G2D1, UniRef:UniRef50_A0A920C274, UniRef:UniRef90_Q2G2D1 contig_1 cds 1294025 1294342 + GCA000560365_01243 rpl7Ae YlxQ family RNA-binding protein COG:COG1358, COG:J, GO:0003723, GO:0003735, RefSeq:WP_000020853.1, SO:0001217, UniParc:UPI0000054AC2, UniRef:UniRef100_Q2G2C9, UniRef:UniRef50_Q2G2C9, UniRef:UniRef90_Q2G2C9 contig_1 cds 1294347 1296464 + GCA000560365_01244 infB translation initiation factor IF-2 COG:COG0532, COG:J, GO:0003743, GO:0003924, GO:0005525, GO:0005737, GO:0005829, GO:0006413, RefSeq:WP_000043634.1, SO:0001217, UniParc:UPI00004B5BC9, UniRef:UniRef100_Q2G2D0, UniRef:UniRef50_P17889, UniRef:UniRef90_Q2G2D0 contig_1 cds 1296850 1297200 + GCA000560365_01245 rbfA 30S ribosome-binding factor RbfA COG:COG0858, COG:J, GO:0005829, GO:0006364, GO:0030490, GO:0043024, RefSeq:WP_000097322.1, SO:0001217, UniParc:UPI00001331BF, UniRef:UniRef100_Q2G2Q4, UniRef:UniRef50_Q2G2Q4, UniRef:UniRef90_Q2G2Q4 contig_1 cds 1297369 1298286 + GCA000560365_01246 truB tRNA pseudouridine(55) synthase TruB COG:COG0130, COG:J, EC:5.4.99.25, GO:0001522, GO:0003723, GO:0009451, GO:0009982, GO:0031119, GO:0160148, GO:1990481, KEGG:K03177, RefSeq:WP_000282305.1, SO:0001217, UniParc:UPI00004B5BCA, UniRef:UniRef100_Q2G2Q3, UniRef:UniRef50_Q2G2Q3, UniRef:UniRef90_Q2G2Q3 contig_1 cds 1298301 1299272 + GCA000560365_01247 ribF riboflavin biosynthesis protein RibF COG:COG0196, COG:H, EC:2.7.1.26, EC:2.7.7.2, GO:0003919, GO:0005737, GO:0006747, GO:0009398, KEGG:K11753, RefSeq:WP_000864185.1, SO:0001217, UniParc:UPI0000054ABD, UniRef:UniRef100_Q2G2Q2, UniRef:UniRef50_Q2G2Q2, UniRef:UniRef90_Q2G2Q2 contig_1 cds 1299387 1299656 + GCA000560365_01248 rpsO 30S ribosomal protein S15 COG:COG0184, COG:J, GO:0003735, GO:0005840, GO:0006412, GO:0019843, GO:0022627, RefSeq:WP_001018328.1, SO:0001217, UniParc:UPI000004801C, UniRef:UniRef100_Q2G2Q1, UniRef:UniRef50_Q2G2Q1, UniRef:UniRef90_Q2G2Q1 contig_1 cds 1300026 1302122 + GCA000560365_01249 pnp polyribonucleotide nucleotidyltransferase COG:COG1185, COG:J, EC:2.7.7.8, GO:0000175, GO:0000287, GO:0003723, GO:0004654, GO:0005829, GO:0006396, GO:0006402, KEGG:K00962, RefSeq:WP_000076690.1, SO:0001217, UniParc:UPI0000054ABB, UniRef:UniRef100_Q2FZ20, UniRef:UniRef50_Q2FZ20, UniRef:UniRef90_Q2FZ20 contig_1 cds 1302358 1304031 + GCA000560365_01250 rnj2 Ribonuclease J 2 COG:COG0595, COG:J, EC:3.1.-.-, GO:0003723, GO:0004521, GO:0004534, GO:0005737, GO:0006364, GO:0008270, RefSeq:WP_000052590.1, SO:0001217, UniParc:UPI00000D7781, UniRef:UniRef100_Q2FZ19, UniRef:UniRef50_Q2FZ19, UniRef:UniRef90_Q2FZ19 contig_1 cds 1304287 1306656 + GCA000560365_01251 ftsK DNA translocase FtsK GO:0003677, GO:0005524, GO:0005886, GO:0007059, GO:0016887, GO:0051301, RefSeq:WP_000035767.1, SO:0001217, UniParc:UPI000062760A, UniRef:UniRef100_Q5HGF5, UniRef:UniRef50_Q5HGF5, UniRef:UniRef90_Q5HGF5 contig_1 cds 1306661 1307374 + GCA000560365_01252 mngR HTH gntR-type domain-containing protein COG:COG2188, COG:K, RefSeq:WP_001293307.1, SO:0001217, UniParc:UPI00003B1602, UniRef:UniRef100_Q2FZ17, UniRef:UniRef50_Q2FZ17, UniRef:UniRef90_Q2FZ17 contig_1 cds 1307405 1308670 + GCA000560365_01253 yfmF EF-P 5-aminopentanol modification-associated protein YfmF COG:COG0612, COG:R, RefSeq:WP_000089941.1, SO:0001217, UniParc:UPI00000CA9CD, UniRef:UniRef100_Q2FZ16, UniRef:UniRef50_Q2FZ16, UniRef:UniRef90_Q2FZ16 contig_1 cds 1308670 1309956 + GCA000560365_01254 yfmH EF-P 5-aminopentanol modification-associated protein YfmH COG:COG0612, COG:R, RefSeq:WP_000664764.1, SO:0001217, UniParc:UPI00004B5BCC, UniRef:UniRef100_A0A0E7DX57, UniRef:UniRef50_A0A7U7PY37, UniRef:UniRef90_A0A7U7PY37 contig_1 cds 1309956 1310660 + GCA000560365_01255 ymfI elongation factor P 5-aminopentanone reductase COG:COG1028, COG:I, RefSeq:WP_000646227.1, SO:0001217, UniParc:UPI0000054AB5, UniRef:UniRef100_Q2FZ14, UniRef:UniRef50_A0A380G8X7, UniRef:UniRef90_A0A389U4Z7 contig_1 cds 1310765 1311592 + GCA000560365_01256 ACT domain-containing protein RefSeq:WP_000214890.1, SO:0001217, UniParc:UPI00000D77F9, UniRef:UniRef100_Q2FZ13, UniRef:UniRef50_O31769, UniRef:UniRef90_A0A1J3ZWG3 contig_1 cds 1311611 1312003 + GCA000560365_01257 rodZ HTH cro/C1-type domain-containing protein COG:COG1426, COG:D, RefSeq:WP_000859443.1, SO:0001217, UniParc:UPI00000D78AE, UniRef:UniRef100_Q2FZ12, UniRef:UniRef50_Q2FZ12, UniRef:UniRef90_Q2FZ12 contig_1 cds 1312037 1312615 + GCA000560365_01258 pgsA CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase PgsA COG:COG0558, COG:I, EC:2.7.8.5, GO:0005886, GO:0006655, GO:0008444, GO:0008654, GO:0016020, KEGG:K00995, RefSeq:WP_001025093.1, SO:0001217, UniParc:UPI0000054AB2, UniRef:UniRef100_Q5HGE8, UniRef:UniRef50_Q5HGE8, UniRef:UniRef90_Q5HGE8 contig_1 cds 1312842 1313993 + GCA000560365_01259 cinA Putative competence-damage inducible protein COG:COG1058, COG:L, RefSeq:WP_000020361.1, SO:0001217, UniParc:UPI0000054AB1, UniRef:UniRef100_A0A380EHG8, UniRef:UniRef50_A0A380G809, UniRef:UniRef90_A0A389XUJ1 contig_1 cds 1314158 1315201 + GCA000560365_01260 recA recombinase RecA COG:COG0468, COG:L, GO:0003677, GO:0003684, GO:0003697, GO:0005524, GO:0005829, GO:0006281, GO:0006310, GO:0008094, GO:0009432, GO:0016887, GO:0140664, KEGG:K03553, RefSeq:WP_000368166.1, SO:0001217, UniParc:UPI000013352D, UniRef:UniRef100_Q5HGE6, UniRef:UniRef50_P0A452, UniRef:UniRef90_Q5HPQ6 contig_1 cds 1315555 1317114 + GCA000560365_01261 rny ribonuclease Y COG:COG1418, COG:JR, EC:3.1.-.-, GO:0003723, GO:0004521, GO:0005886, GO:0006402, GO:0016020, RefSeq:WP_001050913.1, SO:0001217, UniParc:UPI00000D765A, UniRef:UniRef100_Q2FZ08, UniRef:UniRef50_O31774, UniRef:UniRef90_Q2FZ08 contig_1 ncRNA 1317127 1317217 + GCA000560365_01262 sau-27 Staphylococcus sRNA sau-27 RFAM:RF02387, SO:0000655 contig_1 cds 1317411 1317626 - GCA000560365_01263 Phage protein RefSeq:WP_000026308.1, SO:0001217, UniParc:UPI0000054AAD, UniRef:UniRef100_Q2FZ07, UniRef:UniRef50_Q2FZ07, UniRef:UniRef90_Q2FZ07 contig_1 cds 1317800 1318597 + GCA000560365_01264 ymdB TIGR00282 family metallophosphoesterase COG:COG1692, COG:T, RefSeq:WP_001222105.1, SO:0001217, UniParc:UPI0000054AAC, UniRef:UniRef100_Q2FZ06, UniRef:UniRef50_O31775, UniRef:UniRef90_Q2FZ06 contig_1 cds 1318737 1320497 + GCA000560365_01265 porG 2-oxoacid ferredoxin oxidoreductase subunit alpha COG:C, COG:COG1014, EC:1.2.7.11, EC:1.2.7.3, KEGG:K00174, RefSeq:WP_000804328.1, SO:0001217, UniParc:UPI00004B5BCD, UniRef:UniRef100_Q2FZ05, UniRef:UniRef50_A0A840PSQ9, UniRef:UniRef90_A0A380DYA8 contig_1 cds 1320498 1321364 + GCA000560365_01266 porB 2-oxoacid ferredoxin oxidoreductase COG:C, COG:COG1013, RefSeq:WP_000190138.1, SO:0001217, UniParc:UPI00000D76D1, UniRef:UniRef100_W8UY88, UniRef:UniRef50_A0A239ZH51, UniRef:UniRef90_W8UY88 contig_1 cds 1321458 1321751 + GCA000560365_01267 yqgV Thiamine-binding protein domain-containing protein COG:COG0011, COG:H, RefSeq:WP_000655666.1, SO:0001217, UniParc:UPI0000054AA9, UniRef:UniRef100_Q2FZ03, UniRef:UniRef50_Q49X83, UniRef:UniRef90_A0A7U7JUD0 contig_1 cds 1321885 1323429 + GCA000560365_01268 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB COG:COG0621, COG:J, EC:2.8.4.3, GO:0005829, GO:0006400, GO:0016782, GO:0035597, GO:0035600, GO:0046872, GO:0051539, GO:1904047, KEGG:K06168, RefSeq:WP_001001523.1, SO:0001217, UniParc:UPI00004B5BCE, UniRef:UniRef100_Q2FZ02, UniRef:UniRef50_O31778, UniRef:UniRef90_Q2FZ02 contig_1 cds 1323430 1323795 + GCA000560365_01269 ymcA YlbF family regulator COG:COG4550, COG:T, RefSeq:WP_000282388.1, SO:0001217, UniParc:UPI0000054AA7, UniRef:UniRef100_Q2FZ01, UniRef:UniRef50_Q49X86, UniRef:UniRef90_Q2FZ01 contig_1 cds 1323822 1324313 + GCA000560365_01270 thiW energy coupling factor transporter S component ThiW COG:COG4732, COG:H, GO:0005215, GO:0006810, GO:0009228, RefSeq:WP_000842277.1, SO:0001217, UniParc:UPI0000054AA6, UniRef:UniRef100_Q2FZ00, UniRef:UniRef50_Q2FZ00, UniRef:UniRef90_Q2FZ00 contig_1 cds 1324616 1327234 + GCA000560365_01271 mutS DNA mismatch repair protein MutS COG:COG0249, COG:L, GO:0003684, GO:0005524, GO:0005829, GO:0006298, GO:0030983, GO:0140664, RefSeq:WP_000073352.1, SO:0001217, UniParc:UPI00000D78A3, UniRef:UniRef100_Q5HGD6, UniRef:UniRef50_Q2FYZ9, UniRef:UniRef90_Q2FYZ9 contig_1 cds 1327247 1329256 + GCA000560365_01272 mutL DNA mismatch repair endonuclease MutL COG:COG0323, COG:L, GO:0005524, GO:0006298, GO:0016887, GO:0030983, GO:0032300, GO:0140664, RefSeq:WP_000516261.1, SO:0001217, UniParc:UPI0000054AA3, UniRef:UniRef100_Q93T05, UniRef:UniRef50_Q93T05, UniRef:UniRef90_Q93T05 contig_1 cds 1329271 1329804 + GCA000560365_01273 glpP Glycerol uptake operon antiterminator regulatory protein COG:COG1954, COG:K, KEGG:K02443, RefSeq:WP_001063535.1, SO:0001217, UniParc:UPI00000D7824, UniRef:UniRef100_A0A7Z7W1G4, UniRef:UniRef50_Q2FYZ7, UniRef:UniRef90_Q2FYZ7 contig_1 cds 1330269 1331087 + GCA000560365_01274 glpF Aquaporin family protein COG:COG0580, COG:G, RefSeq:WP_001103743.1, SO:0001217, UniParc:UPI0000054667, UniRef:UniRef100_Q2FYZ6, UniRef:UniRef50_P18156, UniRef:UniRef90_Q2FYZ6 contig_1 cds 1331216 1332712 + GCA000560365_01275 glpK glycerol kinase GlpK COG:C, COG:COG0554, EC:2.7.1.30, GO:0004370, GO:0005524, GO:0005829, GO:0006071, GO:0006072, GO:0019563, RefSeq:WP_000417369.1, SO:0001217, UniParc:UPI00004B5BD0, UniRef:UniRef100_Q2FYZ5, UniRef:UniRef50_O34153, UniRef:UniRef90_Q2FYZ5 contig_1 cds 1332870 1334543 + GCA000560365_01276 glpD Aerobic glycerol-3-phosphate dehydrogenase COG:C, COG:COG0578, EC:1.1.5.3, GO:0004368, GO:0005737, GO:0019563, GO:0046168, KEGG:K00111, RefSeq:WP_001218596.1, SO:0001217, UniParc:UPI00004B5BD1, UniRef:UniRef100_Q2FYZ4, UniRef:UniRef50_Q6GHD4, UniRef:UniRef90_Q6GHD4 contig_1 cds 1334690 1335607 + GCA000560365_01277 pldB Hydrolase, alpha/beta fold family domain protein COG:COG2267, COG:I, SO:0001217, UniParc:UPI000005464A, UniRef:UniRef100_Q2FYZ3, UniRef:UniRef50_Q2FYZ3, UniRef:UniRef90_Q2FYZ3 contig_1 cds 1335625 1336560 + GCA000560365_01278 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA COG:COG0324, COG:J, EC:2.5.1.75, GO:0005524, GO:0005737, GO:0006400, GO:0052381, RefSeq:WP_001548613.1, SO:0001217, UniParc:UPI000012F0D2, UniRef:UniRef100_Q2FYZ2, UniRef:UniRef50_Q5HPN8, UniRef:UniRef90_Q2YXR3 contig_1 cds 1336575 1336808 + GCA000560365_01279 hfq RNA chaperone Hfq COG:COG1923, COG:T, GO:0003723, GO:0016070, RefSeq:WP_000561358.1, SO:0001217, UniParc:UPI000005462B, UniRef:UniRef100_Q2FYZ1, UniRef:UniRef50_A0A640MVL3, UniRef:UniRef90_A0A7Z7QYH9 contig_1 cds 1337030 1337506 - GCA000560365_01280 bsaA Glutathione peroxidase-like protein BsaA COG:COG0386, COG:VI, EC:1.11.1.9, GO:0004601, GO:0034599, KEGG:K00432, RefSeq:WP_000448078.1, SO:0001217, UniParc:UPI0000054618, UniRef:UniRef100_Q5HGC7, UniRef:UniRef50_Q8CSR9, UniRef:UniRef90_Q5HGC7 contig_1 cds 1337618 1338856 + GCA000560365_01281 hflX GTPase HflX COG:COG2262, COG:J, GO:0005525, RefSeq:WP_000068617.1, SO:0001217, UniParc:UPI00000CADD7, UniRef:UniRef100_Q2FYY9, UniRef:UniRef50_B9DPA4, UniRef:UniRef90_Q2FYY9 contig_1 cds 1338875 1340113 + GCA000560365_01282 ynbB Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme COG:COG4100, COG:PR, RefSeq:WP_000652047.1, SO:0001217, UniParc:UPI000005460C, UniRef:UniRef100_Q2FYY8, UniRef:UniRef50_A0A202F6W0, UniRef:UniRef90_Q2FYY8 contig_1 cds 1340356 1340724 + GCA000560365_01283 soxR HTH merR-type domain-containing protein COG:COG0789, COG:K, RefSeq:WP_000624945.1, SO:0001217, UniParc:UPI0000054602, UniRef:UniRef100_Q2FYY7, UniRef:UniRef50_Q2FYY7, UniRef:UniRef90_Q2FYY7 contig_1 cds 1340743 1342083 + GCA000560365_01284 glnA type I glutamate--ammonia ligase COG:COG0174, COG:E, EC:6.3.1.2, GO:0004356, GO:0005524, GO:0005737, GO:0006542, GO:0046872, KEGG:K01915, RefSeq:WP_001126603.1, SO:0001217, UniParc:UPI000012B701, UniRef:UniRef100_Q5HGC3, UniRef:UniRef50_P12425, UniRef:UniRef90_Q5HGC3 contig_1 cds 1343358 1343447 + GCA000560365_01285 (pseudo) hypothetical protein SO:0001217, UniParc:UPI0002AFC80E, UniRef:UniRef100_A0A7Z7W1U2, UniRef:UniRef50_A0A2X2KYI6, UniRef:UniRef50_A0A7Z7W1U2, UniRef:UniRef90_A0A2X2KYI6, UniRef:UniRef90_A0A7Z7W1U2 contig_1 cds 1343474 1343686 + GCA000560365_01286 XRE family transcriptional regulator RefSeq:WP_001071308.1, SO:0001217, UniParc:UPI0000696C20, UniRef:UniRef100_Q2FYY4, UniRef:UniRef50_A0A3E0IKC6, UniRef:UniRef90_Q2FYY4 contig_1 cds 1343980 1344186 + GCA000560365_01287 DNA-binding protein RefSeq:WP_001002340.1, SO:0001217, UniParc:UPI00000545CD, UniRef:UniRef100_Q2FYY3, UniRef:UniRef50_Q2FYY3, UniRef:UniRef90_Q2FYY3 contig_1 cds 1345425 1345610 + GCA000560365_01288 DNA-binding protein RefSeq:WP_000006110.1, SO:0001217, UniParc:UPI00000CAA56, UniRef:UniRef100_Q2FYY1, UniRef:UniRef50_Q2FYY1, UniRef:UniRef90_Q2FYY1 contig_1 cds 1346122 1346226 + GCA000560365_01289 hypothetical protein RefSeq:WP_000477492.1, SO:0001217, UniParc:UPI00000545AC, UniRef:UniRef100_Q2FYY0, UniRef:UniRef50_Q2FYY0, UniRef:UniRef90_Q2FYY0 contig_1 cds 1346355 1346606 + GCA000560365_01290 Phage protein RefSeq:WP_000956747.1, SO:0001217, UniParc:UPI0000054598, UniRef:UniRef100_Q2FYX8, UniRef:UniRef50_Q2FYX8, UniRef:UniRef90_Q2FYX8 contig_1 cds 1346652 1347236 + GCA000560365_01291 Phage head morphogenesis domain-containing protein RefSeq:WP_000899337.1, SO:0001217, UniParc:UPI000005458E, UniRef:UniRef100_Q2FYX7, UniRef:UniRef50_Q2FYX7, UniRef:UniRef90_Q2FYX7 contig_1 cds 1347357 1347605 + GCA000560365_01292 hypothetical protein RefSeq:WP_000906224.1, SO:0001217, UniParc:UPI00003B1633, UniRef:UniRef100_Q2FYX6, UniRef:UniRef50_Q2FYX6, UniRef:UniRef90_Q2FYX6 contig_1 cds 1347735 1347836 + GCA000560365_01293 hypothetical protein RefSeq:WP_000429647.1, SO:0001217, UniParc:UPI000005456D, UniRef:UniRef100_Q2FYX4, UniRef:UniRef50_Q2FYX4, UniRef:UniRef90_Q2FYX4 contig_1 cds 1347882 1348148 + GCA000560365_01294 Phage protein RefSeq:WP_000903039.1, SO:0001217, UniParc:UPI0000054564, UniRef:UniRef100_Q2FYX3, UniRef:UniRef50_A0A7U7JUC4, UniRef:UniRef90_Q2FYX3 contig_1 cds 1348157 1348282 + GCA000560365_01295 Phage protein RefSeq:WP_000887403.1, SO:0001217, UniParc:UPI000197A90A, UniRef:UniRef100_Q2FYX2, UniRef:UniRef50_A0A7U7JUI8, UniRef:UniRef90_A0A7U7JUI8 contig_1 cds 1348711 1349001 + GCA000560365_01296 Bacterial toxin 50 domain-containing protein RefSeq:WP_000900530.1, SO:0001217, UniParc:UPI0000054546, UniRef:UniRef100_Q2FYX0, UniRef:UniRef50_Q2FYX0, UniRef:UniRef90_Q2FYX0 contig_1 cds 1349012 1349206 + GCA000560365_01297 LSM domain protein RefSeq:WP_001217295.1, SO:0001217, UniParc:UPI00003B1630, UniRef:UniRef100_Q2FYW9, UniRef:UniRef50_Q2FYW9, UniRef:UniRef90_Q2FYW9 contig_1 cds 1349247 1349597 + GCA000560365_01298 Bacterial toxin 50 domain-containing protein RefSeq:WP_000891995.1, SO:0001217, UniParc:UPI0000054533, UniRef:UniRef100_Q2FYW8, UniRef:UniRef50_Q2FYW8, UniRef:UniRef90_Q2FYW8 contig_1 cds 1349604 1349795 + GCA000560365_01299 LSM domain protein RefSeq:WP_001053371.1, SO:0001217, UniParc:UPI0000054528, UniRef:UniRef100_Q2FYW7, UniRef:UniRef50_Q2FYW7, UniRef:UniRef90_Q2FYW7 contig_1 cds 1350344 1351369 - GCA000560365_01300 gLY1 Aromatic amino acid beta-eliminating lyase/threonine aldolase domain-containing protein COG:COG2008, COG:E, RefSeq:WP_000622700.1, SO:0001217, UniParc:UPI00000CACE3, UniRef:UniRef100_Q2FYW6, UniRef:UniRef50_Q2FYW6, UniRef:UniRef90_Q2FYW6 contig_1 cds 1351639 1351836 + GCA000560365_01301 Phage protein RefSeq:WP_000435068.1, SO:0001217, UniParc:UPI0000054508, UniRef:UniRef100_W8U6A7, UniRef:UniRef50_G5JMD9, UniRef:UniRef90_A0A6A9GYQ0 contig_1 cds 1351894 1353375 + GCA000560365_01302 cls cardiolipin synthase COG:COG1502, COG:I, EC:2.7.8.-, GO:0005886, GO:0008808, GO:0016780, GO:0032049, RefSeq:WP_001212860.1, SO:0001217, UniParc:UPI000004740B, UniRef:UniRef100_Q5HGA3, UniRef:UniRef50_Q8CPD8, UniRef:UniRef90_Q5HGA3 contig_1 cds 1353559 1354458 + GCA000560365_01303 rbbA ABC transporter ATP-binding protein COG:COG1131, COG:JV, RefSeq:WP_000614807.1, SO:0001217, UniParc:UPI00000D76F4, UniRef:UniRef100_A0A0D6HPC7, UniRef:UniRef50_A0A0D6HPC7, UniRef:UniRef90_A0A0D6HPC7 contig_1 cds 1354427 1355158 + GCA000560365_01304 yadH ABC transmembrane type-2 domain-containing protein COG:COG0842, COG:V, RefSeq:WP_000603968.1, SO:0001217, UniParc:UPI00004B5BD6, UniRef:UniRef100_Q2FYW2, UniRef:UniRef50_Q2FYW2, UniRef:UniRef90_Q2FYW2 contig_1 cds 1355162 1356253 + GCA000560365_01305 comP histidine kinase COG:COG4585, COG:T, EC:2.7.13.3, KEGG:K07778, RefSeq:WP_000670313.1, SO:0001217, UniParc:UPI0000696C21, UniRef:UniRef100_A0A1S5ZKP8, UniRef:UniRef50_A0A4U9TN42, UniRef:UniRef90_A0A391F3W4 contig_1 cds 1356250 1356852 + GCA000560365_01306 citB Response regulator transcription factor COG:COG2197, COG:TK, RefSeq:WP_000202389.1, SO:0001217, UniParc:UPI0000696C22, UniRef:UniRef100_A0A1S6DEB4, UniRef:UniRef50_Q2FYW0, UniRef:UniRef90_Q2FYW0 contig_1 cds 1356965 1357153 - GCA000560365_01307 lapA LapA family protein RefSeq:WP_001027143.1, SO:0001217, UniParc:UPI00000544C0, UniRef:UniRef100_Q2FYV9, UniRef:UniRef50_Q2FYV9, UniRef:UniRef90_Q2FYV9 contig_1 cds 1357292 1357825 + GCA000560365_01308 nucI thermonuclease NucI COG:COG1525, COG:L, EC:3.1.31.1, GO:0003676, GO:0016894, RefSeq:WP_000841351.1, SO:0001217, UniParc:UPI00000D77A5, UniRef:UniRef100_Q2FYV8, UniRef:UniRef50_P43270, UniRef:UniRef90_A0A7U7PYI0 contig_1 cds 1357968 1358822 - GCA000560365_01309 NERD domain-containing protein RefSeq:WP_000011823.1, SO:0001217, UniParc:UPI00000D9DCA, UniRef:UniRef100_Q2FYV7, UniRef:UniRef50_G5JGH5, UniRef:UniRef90_A0A0E1XGC0 contig_1 cds 1359144 1359728 + GCA000560365_01310 Phage protein SO:0001217, UniParc:UPI00006E8E86, UniRef:UniRef100_W8TTQ9, UniRef:UniRef50_A0A1S1GQT7, UniRef:UniRef90_A0A7Z7W2Q0 contig_1 cds 1359782 1361164 - GCA000560365_01311 metL1 aspartate kinase COG:COG0527, COG:E, EC:2.7.2.4, GO:0004072, GO:0009089, RefSeq:WP_000868645.1, SO:0001217, UniParc:UPI00000D7823, UniRef:UniRef100_Q2FYV5, UniRef:UniRef50_A0A6V7RA03, UniRef:UniRef90_A0A077UJG8 contig_1 cds 1361355 1362635 + GCA000560365_01312 thrA Homoserine dehydrogenase COG:COG0460, COG:E, RefSeq:WP_000735864.1, SO:0001217, UniParc:UPI00000CA98E, UniRef:UniRef100_Q2FYV4, UniRef:UniRef50_B9DP89, UniRef:UniRef90_A0A2K4AHW8 contig_1 cds 1362641 1363702 + GCA000560365_01313 thrC threonine synthase EC:4.2.3.1, GO:0004795, GO:0009088, KEGG:K01733, RefSeq:WP_001255460.1, SO:0001217, UniParc:UPI000005448B, UniRef:UniRef100_Q2FYV3, UniRef:UniRef50_Q9K7E3, UniRef:UniRef90_Q2FYV3 contig_1 cds 1363704 1364618 + GCA000560365_01314 thrB homoserine kinase COG:COG0083, COG:E, EC:2.7.1.39, GO:0004413, GO:0005524, GO:0005737, GO:0009088, RefSeq:WP_000073184.1, SO:0001217, UniParc:UPI0000054481, UniRef:UniRef100_Q2FYV2, UniRef:UniRef50_Q2FYV2, UniRef:UniRef90_Q2FYV2 contig_1 cds 1364676 1365479 + GCA000560365_01315 cof Cof-type HAD-IIB family hydrolase COG:COG0561, COG:HR, EC:3.1.3.104, KEGG:K21064, RefSeq:WP_000186313.1, SO:0001217, UniParc:UPI0000054476, UniRef:UniRef100_Q2FYV1, UniRef:UniRef50_Q2FYV1, UniRef:UniRef90_Q2FYV1 contig_1 cds 1365772 1366086 - GCA000560365_01316 Phage protein RefSeq:WP_000580198.1, SO:0001217, UniParc:UPI0000054461, UniRef:UniRef100_Q2FYV0, UniRef:UniRef50_B9DP93, UniRef:UniRef90_Q2FYV0 contig_1 cds 1366304 1367758 - GCA000560365_01317 lysP Amino acid permease/ SLC12A domain-containing protein COG:COG0833, COG:E, RefSeq:WP_000389956.1, SO:0001217, UniParc:UPI00000D7677, UniRef:UniRef100_Q2FYU8, UniRef:UniRef50_Q2FYU8, UniRef:UniRef90_Q2FYU8 contig_1 cds 1367962 1369479 + GCA000560365_01318 katA Catalase COG:COG0753, COG:P, EC:1.11.1.6, GO:0004096, GO:0005737, GO:0020037, GO:0042542, GO:0042744, GO:0046872, KEGG:K03781, RefSeq:WP_000082539.1, SO:0001217, UniParc:UPI00000D9DCC, UniRef:UniRef100_Q2FYU7, UniRef:UniRef50_O52762, UniRef:UniRef90_Q2FYU7 contig_1 cds 1369570 1369719 + GCA000560365_01319 rpmG 50S ribosomal protein L33 COG:COG0267, COG:J, GO:0003735, GO:0005737, GO:0005840, GO:0006412, GO:1990904, KEGG:K02913, RefSeq:WP_001265708.1, SO:0001217, UniParc:UPI0000132FC6, UniRef:UniRef100_Q2FYU6, UniRef:UniRef50_Q2FYU6, UniRef:UniRef90_Q2FYU6 contig_1 cds 1370173 1370442 + GCA000560365_01320 rpsN 30S ribosomal protein S14 COG:COG0199, COG:J, GO:0003735, GO:0005737, GO:0005840, GO:0006412, GO:0015935, GO:0019843, RefSeq:WP_001085655.1, SO:0001217, UniParc:UPI000005442A, UniRef:UniRef100_Q2FYU5, UniRef:UniRef50_Q5HPK6, UniRef:UniRef90_Q5HPK6 contig_1 cds 1370599 1371576 + GCA000560365_01321 GMP reductase RefSeq:WP_000688126.1, SO:0001217, UniParc:UPI00004B5BDA, UniRef:UniRef100_Q2FYU4, UniRef:UniRef90_Q4L646 contig_1 cds 1371751 1372614 + GCA000560365_01322 CAP domain-containing protein RefSeq:WP_000380731.1, SO:0001217, UniParc:UPI00004B5BDB, UniRef:UniRef100_Q2FYU2, UniRef:UniRef50_Q49XD3, UniRef:UniRef90_Q2FYU2 contig_1 cds 1372994 1373617 - GCA000560365_01323 lexA transcriptional repressor LexA COG:COG1974, COG:KT, EC:3.4.21.88, GO:0003677, GO:0004252, GO:0006260, GO:0006281, GO:0006508, GO:0009432, GO:0045892, KEGG:K01356, RefSeq:WP_001208760.1, SO:0001217, UniParc:UPI00000543FA, UniRef:UniRef100_Q2FYU1, UniRef:UniRef50_Q81A92, UniRef:UniRef90_Q2FYU1 contig_1 cds 1373757 1373993 + GCA000560365_01324 sosA DNA damage-induced cell division inhibitor SosA SO:0001217, UniParc:UPI00003B1AD7, UniRef:UniRef100_Q2FYU0, UniRef:UniRef50_A0A6K8S2R2, UniRef:UniRef90_A0A6K8S2R2 contig_1 cds 1374129 1374368 + GCA000560365_01325 ynzC UPF0291 protein SACOL1376 COG:COG4224, COG:S, GO:0005737, RefSeq:WP_000071351.1, SO:0001217, UniParc:UPI00000D776D, UniRef:UniRef100_P60076, UniRef:UniRef50_P60076, UniRef:UniRef90_P60076 contig_1 cds 1374489 1376477 + GCA000560365_01326 tkt transketolase COG:COG0021, COG:G, EC:2.2.1.1, GO:0004802, GO:0005829, GO:0006098, GO:0006310, GO:0019253, GO:0046872, KEGG:K00615, RefSeq:WP_000481443.1, SO:0001217, UniParc:UPI00000543E4, UniRef:UniRef100_Q5HG77, UniRef:UniRef50_P22976, UniRef:UniRef90_Q5HG77 contig_1 cds 1376710 1376997 + GCA000560365_01327 yneF UPF0154 protein SaurJH1_1431 COG:COG3763, COG:S, GO:0005886, KEGG:K09976, RefSeq:WP_001548645.1, SO:0001217, UniParc:UPI0000696C25, UniRef:UniRef100_P67291, UniRef:UniRef50_P67288, UniRef:UniRef90_P67291 contig_1 cds 1377176 1377643 + GCA000560365_01328 ccdC DUF1453 domain-containing protein COG:COG4846, COG:T, RefSeq:WP_000966142.1, SO:0001217, UniParc:UPI00000D7753, UniRef:UniRef100_W8UY14, UniRef:UniRef50_Q2FYT5, UniRef:UniRef90_Q2FYT5 contig_1 cds 1377767 1378888 + GCA000560365_01329 sbcD exonuclease subunit SbcD COG:COG0420, COG:L, EC:3.1.11.-, GO:0004519, GO:0004527, GO:0006260, GO:0006310, GO:0008408, RefSeq:WP_000691284.1, SO:0001217, UniParc:UPI00000D9DCF, UniRef:UniRef100_Q2FYT4, UniRef:UniRef50_Q2FYT4, UniRef:UniRef90_Q2FYT4 contig_1 cds 1378892 1381921 + GCA000560365_01330 sbcC exonuclease subunit SbcC COG:COG0419, COG:L, EC:3.1.11.-, GO:0004519, GO:0004527, GO:0005524, GO:0006260, GO:0006302, GO:0006310, GO:0016887, RefSeq:WP_000803164.1, SO:0001217, UniParc:UPI00004B5BDD, UniRef:UniRef100_Q5HG72, UniRef:UniRef50_Q2FYT3, UniRef:UniRef90_Q2FYT3 contig_1 cds 1381992 1382354 - GCA000560365_01331 mscL large conductance mechanosensitive channel protein MscL COG:COG1970, COG:M, GO:0005886, GO:0008381, GO:0042802, KEGG:K03282, RefSeq:WP_000910489.1, SO:0001217, UniParc:UPI000012F5E4, UniRef:UniRef100_P68805, UniRef:UniRef50_P68805, UniRef:UniRef90_P68805 contig_1 cds 1382558 1384204 + GCA000560365_01332 betT Glycine betaine transporter COG:COG1292, COG:M, RefSeq:WP_001088978.1, SO:0001217, UniParc:UPI00000549F5, UniRef:UniRef100_Q2FYT0, UniRef:UniRef50_A0A1D4R1U3, UniRef:UniRef90_A0A7U7JUD7 contig_1 ncRNA 1384481 1384808 - GCA000560365_01333 S35 Staphylococcus sRNA 35 (srn_0335) RFAM:RF02894, SO:0000655 contig_1 cds 1385096 1387801 + GCA000560365_01334 acnA aconitate hydratase AcnA COG:C, COG:COG1048, EC:4.2.1.3, GO:0003729, GO:0003730, GO:0003994, GO:0006099, GO:0019679, GO:0046872, GO:0047456, GO:0051539, KEGG:K27802, RefSeq:WP_000729744.1, SO:0001217, UniParc:UPI00000549F4, UniRef:UniRef100_Q5HG69, UniRef:UniRef50_Q9RTN7, UniRef:UniRef90_Q8CPC2 contig_1 cds 1387981 1388448 + GCA000560365_01335 menI 1,4-dihydroxy-2-naphthoyl-CoA hydrolase MenI COG:COG0824, COG:I, EC:3.1.2.-, EC:3.1.2.28, GO:0009234, KEGG:K07107, RefSeq:WP_031808146.1, SO:0001217, UniParc:UPI00045015FE, UniRef:UniRef100_UPI00045015FE, UniRef:UniRef50_Q2FYS8, UniRef:UniRef90_Q2FYS8 contig_1 cds 1388655 1388951 - GCA000560365_01336 yneR putative protein SAR1364 COG:COG4841, COG:S, RefSeq:WP_001165377.1, SO:0001217, UniParc:UPI00000549F2, UniRef:UniRef100_Q2FYS7, UniRef:UniRef50_Q2FYS7, UniRef:UniRef90_Q2FYS7 contig_1 ncRNA 1388944 1389192 + GCA000560365_01337 S35 Staphylococcus sRNA 35 (srn_0335) RFAM:RF02894, SO:0000655 contig_1 cds 1389327 1389935 - GCA000560365_01338 plsY glycerol-3-phosphate 1-O-acyltransferase PlsY COG:COG0344, COG:I, EC:2.3.1.15, EC:2.3.1.275, GO:0005886, GO:0006654, GO:0008374, GO:0008654, GO:0043772, KEGG:K08591, RefSeq:WP_000972781.1, SO:0001217, UniParc:UPI00000549F0, UniRef:UniRef100_Q2FYS6, UniRef:UniRef50_Q2FYS6, UniRef:UniRef90_Q2FYS6 contig_1 cds 1390141 1392132 + GCA000560365_01339 parE DNA topoisomerase IV subunit B COG:COG0187, COG:L, EC:5.6.2.2, GO:0003677, GO:0003918, GO:0005524, GO:0005694, GO:0006265, GO:0007059, GO:0034335, GO:0046872, RefSeq:WP_001548666.1, SO:0001217, UniParc:UPI000011D798, UniRef:UniRef100_Q2FYS5, UniRef:UniRef50_Q59961, UniRef:UniRef90_Q2FYS5 contig_1 cds 1392132 1394534 + GCA000560365_01340 parC DNA topoisomerase IV subunit A COG:COG0188, COG:L, EC:5.6.2.2, GO:0003677, GO:0003918, GO:0005524, GO:0005694, GO:0005737, GO:0006265, GO:0007059, GO:0009330, GO:0019897, GO:0034335, RefSeq:WP_001289589.1, SO:0001217, UniParc:UPI0000696C29, UniRef:UniRef100_A0A5P6T2Z4, UniRef:UniRef50_P72525, UniRef:UniRef90_Q2FYS4 contig_1 cds 1394784 1396244 + GCA000560365_01341 alsT Amino acid carrier protein COG:COG1115, COG:E, KEGG:K03310, RefSeq:WP_000651160.1, SO:0001217, UniParc:UPI00000D7777, UniRef:UniRef100_Q2G2N5, UniRef:UniRef50_A0A078M5B3, UniRef:UniRef90_A0A0U1MK54 contig_1 cds 1396744 1397595 + GCA000560365_01342 glcT glucose PTS transporter transcription antiterminator GlcT COG:COG3711, COG:K, GO:0003723, GO:0045893, KEGG:K03480, RefSeq:WP_000505015.1, SO:0001217, UniParc:UPI00000D7867, UniRef:UniRef100_Q2G2N4, UniRef:UniRef50_O33618, UniRef:UniRef90_Q2G2N4 contig_1 cds 1397790 1398938 + GCA000560365_01343 perM AI-2E family transporter COG:COG0628, COG:R, RefSeq:WP_000673632.1, SO:0001217, UniParc:UPI0001BAF7E0, UniRef:UniRef100_Q2G2N2, UniRef:UniRef50_Q2G2N2, UniRef:UniRef90_Q2G2N2 contig_1 cds 1399419 1401941 + GCA000560365_01344 mprF bifunctional lysylphosphatidylglycerol flippase/synthetase MprF COG:COG2898, COG:I, EC:2.3.2.3, GO:0005886, GO:0006629, GO:0046677, GO:0050071, GO:0055091, KEGG:K14205, RefSeq:WP_001071135.1, SO:0001217, UniParc:UPI0000052264, UniRef:UniRef100_Q2G2M2, UniRef:UniRef50_Q2G2M2, UniRef:UniRef90_Q2G2M2 contig_1 cds 1402144 1402653 - GCA000560365_01345 msrA1 Peptide methionine sulfoxide reductase MsrA 1 COG:COG0225, COG:O, EC:1.8.4.11, GO:0008113, GO:0033744, GO:0036211, RefSeq:WP_001024830.1, SO:0001217, UniParc:UPI000012F5B2, UniRef:UniRef100_P0A084, UniRef:UniRef50_P0A084, UniRef:UniRef90_P0A084 contig_1 cds 1402790 1403773 + GCA000560365_01346 msrR Regulatory protein MsrR COG:COG1316, COG:M, EC:2.7.8.-, GO:0005886, KEGG:K01005, RefSeq:WP_000356975.1, SO:0001217, UniParc:UPI00000549E5, UniRef:UniRef100_Q7BHL7, UniRef:UniRef50_Q7BHL7, UniRef:UniRef90_Q7BHL7 contig_1 cds 1403861 1404049 - GCA000560365_01347 pptA 2-hydroxymuconate tautomerase COG:COG1942, COG:Q, EC:5.3.2.-, EC:5.3.2.6, GO:0008152, GO:0016853, GO:0016862, RefSeq:WP_001548680.1, SO:0001217, UniParc:UPI00000549E3, UniRef:UniRef100_P99132, UniRef:UniRef50_Q814P5, UniRef:UniRef90_P99132 contig_1 cds 1404194 1405150 + GCA000560365_01348 Y-family DNA polymerase SO:0001217, UniRef:UniRef50_A0A3E0IME2, UniRef:UniRef90_UPI0021AB9F04 contig_1 cds 1405147 1405455 + GCA000560365_01349 Truncated ImpB/MucB/SamB family protein (Fragment 2) SO:0001217, UniRef:UniRef50_B9DP45 contig_1 cds 1405592 1406683 - GCA000560365_01350 tyrA prephenate dehydrogenase COG:COG0287, COG:E, EC:1.3.1.12, GO:0004665, GO:0006571, GO:0008977, GO:0070403, RefSeq:WP_000214266.1, SO:0001217, UniParc:UPI00000D9DD5, UniRef:UniRef100_Q2FH71, UniRef:UniRef50_Q2FYS1, UniRef:UniRef90_Q2FYS1 contig_1 cds 1406848 1407879 + GCA000560365_01351 frvX Aminopeptidase COG:COG1363, COG:EG, EC:3.4.11.-, KEGG:K01269, RefSeq:WP_000433363.1, SO:0001217, UniParc:UPI00004B5BE1, UniRef:UniRef100_A0A0E7NTZ3, UniRef:UniRef50_O07603, UniRef:UniRef90_A0A0E7NTZ3 contig_1 cds 1408371 1409777 + GCA000560365_01352 trpE anthranilate synthase component I COG:COG0147, COG:EH, EC:4.1.3.27, KEGG:K01657, RefSeq:WP_000350976.1, SO:0001217, UniParc:UPI0000696C2B, UniRef:UniRef100_A0A5A8VEJ8, UniRef:UniRef50_A0A6N3A4A0, UniRef:UniRef90_A0A7U7EYB1 contig_1 cds 1409774 1410340 + GCA000560365_01353 Anthranilate synthase component II RefSeq:WP_000604817.1, SO:0001217, UniParc:UPI00000549DE, UniRef:UniRef100_Q2FYR8, UniRef:UniRef50_B9DP49, UniRef:UniRef90_A0A077UJD9 contig_1 cds 1410346 1411344 + GCA000560365_01354 trpD Anthranilate phosphoribosyltransferase COG:COG0547, COG:E, EC:2.4.2.18, GO:0000162, GO:0000287, GO:0004048, GO:0005829, KEGG:K00766, RefSeq:WP_000173832.1, SO:0001217, UniParc:UPI0000232DA1, UniRef:UniRef100_Q2FYR7, UniRef:UniRef50_Q2FYR7, UniRef:UniRef90_Q2FYR7 contig_1 cds 1411346 1412128 + GCA000560365_01355 trpC indole-3-glycerol phosphate synthase TrpC COG:COG0134, COG:E, EC:4.1.1.48, GO:0000162, GO:0004425, GO:0004640, GO:0006568, RefSeq:WP_000154116.1, SO:0001217, UniParc:UPI0000137562, UniRef:UniRef100_Q2FYR6, UniRef:UniRef50_Q2FYR6, UniRef:UniRef90_Q2FYR6 contig_1 cds 1412125 1412760 + GCA000560365_01356 trpF phosphoribosylanthranilate isomerase COG:COG0135, COG:E, EC:5.3.1.24, GO:0000162, GO:0004640, GO:0006568, SO:0001217, UniParc:UPI00000549DB, UniRef:UniRef100_Q2FYR5, UniRef:UniRef50_Q2FYR5, UniRef:UniRef90_Q2FYR5 contig_1 cds 1412753 1413967 + GCA000560365_01357 trpB tryptophan synthase subunit beta COG:COG0133, COG:E, EC:4.2.1.20, GO:0000162, GO:0004834, GO:0005737, GO:0006568, RefSeq:WP_001041337.1, SO:0001217, UniParc:UPI00000549DA, UniRef:UniRef100_Q2FYR4, UniRef:UniRef50_P07600, UniRef:UniRef90_Q2FYR4 contig_1 cds 1413960 1414688 + GCA000560365_01358 trpA tryptophan synthase subunit alpha COG:COG0159, COG:E, EC:4.2.1.20, GO:0000162, GO:0004834, GO:0005829, GO:0006568, KEGG:K01695, RefSeq:WP_000163627.1, SO:0001217, UniParc:UPI00000D9DD8, UniRef:UniRef100_Q2FYR3, UniRef:UniRef50_Q2FYR3, UniRef:UniRef90_Q2FYR3 contig_1 cds 1415010 1416272 + GCA000560365_01359 femA glycine glycyltransferase FemA BlastRules:WP_000673309, COG:COG2348, COG:M, EC:2.3.2.17, GO:0000166, GO:0005737, GO:0008360, GO:0009252, GO:0016755, GO:0046677, GO:0071555, RefSeq:WP_000673309.1, SO:0001217, UniParc:UPI0000167807, UniRef:UniRef100_Q2FYR2, UniRef:UniRef50_Q2FYR2, UniRef:UniRef90_Q2FYR2 contig_1 cds 1416291 1417550 + GCA000560365_01360 femB glycine glycyltransferase FemB BlastRules:WP_000673098, COG:COG2348, COG:M, EC:2.3.2.18, GO:0005737, GO:0008360, GO:0009252, GO:0016755, GO:0071555, KEGG:K11695, RefSeq:WP_000673098.1, SO:0001217, UniParc:UPI00000549D5, UniRef:UniRef100_Q2FYR1, UniRef:UniRef50_Q2FYR1, UniRef:UniRef90_Q2FYR1 contig_1 cds 1418239 1419006 + GCA000560365_01361 cof Hydrolase COG:COG0561, COG:HR, RefSeq:WP_001213019.1, SO:0001217, UniParc:UPI0000006608, UniRef:UniRef100_Q2FYR0, UniRef:UniRef50_Q2FYR0, UniRef:UniRef90_Q2FYR0 contig_1 cds 1419054 1419527 - GCA000560365_01362 SWIM-type domain-containing protein RefSeq:WP_000523665.1, SO:0001217, UniParc:UPI0000006607, UniRef:UniRef100_Q2FYQ9, UniRef:UniRef50_Q2FYQ9, UniRef:UniRef90_Q2FYQ9 contig_1 cds 1419651 1420352 - GCA000560365_01363 nikE Nickel import system ATP-binding protein NikE COG:COG1124, COG:EP, EC:7.2.2.11, GO:0005524, GO:0005886, GO:0015413, GO:0016887, RefSeq:WP_000571258.1, SO:0001217, UniParc:UPI00000549D3, UniRef:UniRef100_Q2FYQ8, UniRef:UniRef50_Q2FYQ8, UniRef:UniRef90_Q2FYQ8 contig_1 cds 1420345 1421121 - GCA000560365_01364 nikD Nickel import system ATP-binding protein NikD COG:COG0444, COG:EP, EC:7.2.2.11, GO:0005524, GO:0005886, GO:0015413, GO:0016887, SO:0001217, UniParc:UPI00000BE13D, UniRef:UniRef100_A0A0D6HNB7, UniRef:UniRef50_Q2FYQ7, UniRef:UniRef90_Q2FYQ7 contig_1 cds 1421105 1421935 - GCA000560365_01365 nikC nickel transporter permease COG:COG1173, COG:EP, GO:0005886, GO:0015675, GO:0043190, GO:0055085, GO:0140359, RefSeq:WP_000548932.1, SO:0001217, UniParc:UPI0000006604, UniRef:UniRef100_Q2FYQ6, UniRef:UniRef50_Q2FYQ6, UniRef:UniRef90_Q2FYQ6 contig_1 cds 1421928 1422914 - GCA000560365_01366 nikB nickel ABC transporter permease COG:COG0601, COG:EP, GO:0005886, GO:0015099, GO:0043190, GO:0140359, RefSeq:WP_000469949.1, SO:0001217, UniParc:UPI0000006603, UniRef:UniRef100_Q2FYQ5, UniRef:UniRef50_Q2FYQ5, UniRef:UniRef90_Q2FYQ5 contig_1 cds 1423218 1423562 - GCA000560365_01367 Permease RefSeq:WP_000171798.1, SO:0001217, UniParc:UPI00000D788B, UniRef:UniRef100_Q2FYQ3, UniRef:UniRef50_A0A3A0VJ57, UniRef:UniRef90_Q2FYQ3 contig_1 cds 1423767 1425581 + GCA000560365_01368 pepF oligoendopeptidase F COG:COG1164, COG:E, EC:3.4.24.-, GO:0004222, GO:0006508, KEGG:K08602, RefSeq:WP_000077571.1, SO:0001217, UniParc:UPI00000CAA92, UniRef:UniRef100_Q2FYQ2, UniRef:UniRef50_A0A7X9ZKX9, UniRef:UniRef90_A0A641AAT8 contig_1 cds 1425721 1426362 - GCA000560365_01369 phoU phosphate signaling complex protein PhoU COG:COG0704, COG:P, GO:0006817, GO:0030643, GO:0045936, RefSeq:WP_000974847.1, SO:0001217, UniParc:UPI00000549CE, UniRef:UniRef100_Q2FYQ1, UniRef:UniRef50_A0A4R6BXI3, UniRef:UniRef90_A0A2K4AIT2 contig_1 cds 1426369 1427220 - GCA000560365_01370 pstB phosphate ABC transporter ATP-binding protein PstB COG:COG1117, COG:P, EC:7.3.2.1, GO:0005524, GO:0005886, GO:0006817, GO:0009898, GO:0015415, GO:0016887, GO:0035435, GO:0055052, RefSeq:WP_000079447.1, SO:0001217, UniParc:UPI00000549CD, UniRef:UniRef100_Q2FYQ0, UniRef:UniRef50_Q2FYQ0, UniRef:UniRef90_Q2FYQ0 contig_1 cds 1427267 1428184 - GCA000560365_01371 pstA phosphate ABC transporter permease PstA COG:COG0581, COG:P, GO:0005886, GO:0006817, GO:0015415, GO:0055052, RefSeq:WP_000450297.1, SO:0001217, UniParc:UPI00000549CC, UniRef:UniRef100_Q2FYP9, UniRef:UniRef50_B9E6T5, UniRef:UniRef90_A0A380EIN5 contig_1 cds 1428186 1429112 - GCA000560365_01372 pstC phosphate ABC transporter permease subunit PstC COG:COG0573, COG:P, GO:0005886, GO:0006817, GO:0015415, GO:0055052, RefSeq:WP_000204625.1, SO:0001217, UniParc:UPI00000D9DE2, UniRef:UniRef100_Q2FYP8, UniRef:UniRef50_A0A235FA99, UniRef:UniRef90_A0A380EHK1 contig_1 cds 1429303 1430286 - GCA000560365_01373 pstS Phosphate-binding protein PstS COG:COG0226, COG:P, GO:0005886, GO:0006817, GO:0042301, RefSeq:WP_000759232.1, SO:0001217, UniParc:UPI00000549C9, UniRef:UniRef100_Q2FYP6, UniRef:UniRef50_Q49XJ1, UniRef:UniRef90_Q2FYP6 contig_1 cds 1431258 1432160 - GCA000560365_01374 cvfB RNA-binding virulence regulatory protein CvfB BlastRules:WP_001095445, BlastRules:WP_001162352, RefSeq:WP_001162359.1, SO:0001217, UniParc:UPI00000549C7, UniRef:UniRef100_Q2FYP3, UniRef:UniRef50_Q2FYP3, UniRef:UniRef90_Q2FYP3 contig_1 cds 1432307 1433908 + GCA000560365_01375 uup ABC transporter domain-containing protein COG:COG0488, COG:R, RefSeq:WP_000942300.1, SO:0001217, UniParc:UPI00000D9DE5, UniRef:UniRef100_Q2FYP2, UniRef:UniRef50_R5Y8E8, UniRef:UniRef90_S2YJP1 contig_1 ncRNA-region 1434511 1434686 + Lysine riboswitch aptamer RFAM:RF00168, SO:0000035 contig_1 cds 1434768 1435973 + GCA000560365_01376 metL1 aspartate kinase COG:COG0527, COG:E, EC:2.7.2.4, RefSeq:WP_000258711.1, SO:0001217, UniParc:UPI0000696C2C, UniRef:UniRef100_A0A0E8GBM7, UniRef:UniRef50_B9EBZ4, UniRef:UniRef90_A0A0H2WZ50 contig_1 cds 1436037 1437026 + GCA000560365_01377 asd aspartate-semialdehyde dehydrogenase COG:COG0136, COG:E, EC:1.2.1.11, GO:0004073, GO:0008652, GO:0016620, GO:0051287, KEGG:K00133, RefSeq:WP_000163531.1, SO:0001217, UniParc:UPI00000549C4, UniRef:UniRef100_Q2FYP0, UniRef:UniRef50_A0A2T4PUK5, UniRef:UniRef90_A0A7Z7QZD9 contig_1 cds 1437028 1437915 + GCA000560365_01378 dapA 4-hydroxy-tetrahydrodipicolinate synthase COG:COG0329, COG:EM, EC:4.3.3.7, GO:0005829, GO:0008840, GO:0009089, GO:0019877, RefSeq:WP_000149257.1, SO:0001217, UniParc:UPI00000549C3, UniRef:UniRef100_Q9EZ12, UniRef:UniRef50_Q6GH13, UniRef:UniRef90_Q6GH13 contig_1 cds 1437912 1438634 + GCA000560365_01379 dapB 4-hydroxy-tetrahydrodipicolinate reductase COG:COG0289, COG:E, EC:1.17.1.8, GO:0005829, GO:0008839, GO:0009089, GO:0016726, GO:0019877, GO:0050661, GO:0051287, KEGG:K00215, RefSeq:WP_000698235.1, SO:0001217, UniParc:UPI00004B5BE7, UniRef:UniRef100_Q9EZ11, UniRef:UniRef50_Q9EZ11, UniRef:UniRef90_Q9EZ11 contig_1 cds 1438661 1439380 + GCA000560365_01380 dapD 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase COG:COG2171, COG:E, EC:2.3.1.89, GO:0009089, GO:0019877, GO:0047200, KEGG:K05822, RefSeq:WP_000249839.1, SO:0001217, UniParc:UPI00000549C1, UniRef:UniRef100_Q2FYN7, UniRef:UniRef50_A8F8L8, UniRef:UniRef90_Q2FYN7 contig_1 cds 1439523 1440674 + GCA000560365_01381 abgB putative hydrolase SAS1339 COG:COG1473, COG:R, EC:3.-.-.-, GO:0016787, RefSeq:WP_001003793.1, SO:0001217, UniParc:UPI00000D9DE8, UniRef:UniRef100_Q2FYN6, UniRef:UniRef50_Q2FYN6, UniRef:UniRef90_Q2FYN6 contig_1 cds 1440679 1441764 + GCA000560365_01382 alr2 Alanine racemase 2 COG:COG0787, COG:M, EC:5.1.1.1, GO:0005829, GO:0008784, GO:0009252, GO:0030170, GO:0030632, KEGG:K01775, RefSeq:WP_000127593.1, SO:0001217, UniParc:UPI00001258DA, UniRef:UniRef100_Q9EZ08, UniRef:UniRef50_Q9EZ08, UniRef:UniRef90_Q9EZ08 contig_1 cds 1441754 1443019 + GCA000560365_01383 lysA diaminopimelate decarboxylase COG:COG0019, COG:E, EC:4.1.1.20, GO:0008836, GO:0009089, GO:0030170, GO:0046677, KEGG:K01586, RefSeq:WP_000216946.1, SO:0001217, UniParc:UPI00000549BE, UniRef:UniRef100_Q5HG20, UniRef:UniRef50_Q5HG20, UniRef:UniRef90_Q5HG20 contig_1 cds 1443259 1443660 - GCA000560365_01384 msaC sarA expression modulator MsaC BlastRules:WP_000876201, GO:0005886, RefSeq:WP_000876201.1, SO:0001217, UniParc:UPI00000D776A, UniRef:UniRef100_Q2FYN3, UniRef:UniRef50_Q2FYN3, UniRef:UniRef90_Q2FYN3 contig_1 cds 1443857 1444057 - GCA000560365_01385 cspA cold shock protein CspA BlastRules:WP_000809131, COG:COG1278, COG:K, GO:0003676, GO:0005737, KEGG:K03704, RefSeq:WP_000809131.1, SO:0001217, UniParc:UPI00000D7888, UniRef:UniRef100_Q2FYN2, UniRef:UniRef50_P42016, UniRef:UniRef90_Q2FYN2 contig_1 cds 1444228 1444536 - GCA000560365_01386 msaA regulatory protein MsaA BlastRules:WP_000269923, COG:COG4699, COG:S, RefSeq:WP_000269923.1, SO:0001217, UniParc:UPI0000054A76, UniRef:UniRef100_Q2FYN0, UniRef:UniRef50_Q2FYN0, UniRef:UniRef90_Q2FYN0 contig_1 cds 1444699 1444968 + GCA000560365_01387 acyP acylphosphatase COG:C, COG:COG1254, EC:3.6.1.7, GO:0003998, GO:0008270, GO:0016743, GO:0051604, RefSeq:WP_001215907.1, SO:0001217, UniParc:UPI00000D7703, UniRef:UniRef100_Q2FYM9, UniRef:UniRef50_Q4L6A9, UniRef:UniRef90_Q2FYM9 contig_1 cds 1444993 1445616 + GCA000560365_01388 xpaC 5-bromo-4-chloroindolyl phosphate hydrolase COG:COG4915, COG:QR, SO:0001217, UniParc:UPI00000D787B, UniRef:UniRef100_A0A7I0YLW0, UniRef:UniRef50_K9AM25, UniRef:UniRef90_Q2FYM8 contig_1 cds 1445648 1446784 + GCA000560365_01389 yaaN TelA-like protein MW1294 COG:COG3853, COG:V, RefSeq:WP_000138413.1, SO:0001217, UniParc:UPI00003B167B, UniRef:UniRef100_Q2FYM7, UniRef:UniRef50_Q49XK7, UniRef:UniRef90_Q2FYM7 contig_1 cds 1447052 1447444 - GCA000560365_01390 Truncated transposase SO:0001217, UniParc:UPI0000054A6E, UniRef:UniRef100_Q2FYM5, UniRef:UniRef50_Q4L350, UniRef:UniRef90_Q2FYM5 contig_1 ncRNA 1447481 1447718 + GCA000560365_01391 tsr24 S. aureus tsr24 small RNA RFAM:RF02577, SO:0000655 contig_1 cds 1447797 1449140 - GCA000560365_01392 brnQ branched-chain amino acid transport system II carrier protein COG:COG1114, COG:E, GO:0005304, GO:0005886, GO:0015188, GO:0015190, GO:0015658, GO:0015803, GO:0015818, GO:0015820, GO:0016020, KEGG:K03311, RefSeq:WP_001039275.1, SO:0001217, UniParc:UPI0000054A6D, UniRef:UniRef100_Q2FYM4, UniRef:UniRef50_Q2FYM4, UniRef:UniRef90_Q2FYM4 contig_1 cds 1449365 1451251 - GCA000560365_01393 norD Nitric oxide reductase activation protein NorD COG:COG4548, COG:P, RefSeq:WP_001283665.1, SO:0001217, UniParc:UPI0000054A6C, UniRef:UniRef100_Q2G2J9, UniRef:UniRef50_A0A380G8L3, UniRef:UniRef90_A0A5N5IGR7 contig_1 cds 1451265 1452056 - GCA000560365_01394 mMP0363 putative protein SAOUHSC_01413 COG:COG0714, COG:R, GO:0005524, GO:0016887, RefSeq:WP_001185424.1, SO:0001217, UniParc:UPI0000696C2D, UniRef:UniRef100_Q2FH29, UniRef:UniRef50_Q49XL1, UniRef:UniRef90_Q2G2J8 contig_1 cds 1452237 1452440 - GCA000560365_01395 Phage protein RefSeq:WP_000902175.1, SO:0001217, UniParc:UPI0000054A6A, UniRef:UniRef100_Q2G2J7, UniRef:UniRef50_Q2G2J7, UniRef:UniRef90_Q2G2J7 contig_1 cds 1452469 1453278 - GCA000560365_01396 VOC domain-containing protein RefSeq:WP_000334518.1, SO:0001217, UniParc:UPI00000D77BF, UniRef:UniRef100_Q2FYM3, UniRef:UniRef50_A0A6N3AGB1, UniRef:UniRef90_Q2FYM3 contig_1 cds 1453858 1455126 - GCA000560365_01397 sucB dihydrolipoyllysine-residue succinyltransferase COG:C, COG:COG0508, EC:2.3.1.61, GO:0004149, GO:0005829, GO:0006099, GO:0033512, GO:0045252, RefSeq:WP_031808147.1, SO:0001217, UniParc:UPI0004489282, UniRef:UniRef100_UPI0004489282, UniRef:UniRef50_Q2FYM2, UniRef:UniRef90_Q2FYM2 contig_1 cds 1455140 1457938 - GCA000560365_01398 odhA 2-oxoglutarate dehydrogenase E1 component COG:C, COG:COG0567, EC:1.2.4.2, GO:0004591, GO:0005829, GO:0006096, GO:0006099, GO:0030976, GO:0045252, RefSeq:WP_000180666.1, SO:0001217, UniParc:UPI0000054A66, UniRef:UniRef100_Q2FYM1, UniRef:UniRef50_P0C601, UniRef:UniRef90_P0C601 contig_1 cds 1458222 1459577 - GCA000560365_01399 arlS sensor histidine kinase ArlS BlastRules:WP_000166801, COG:COG5002, COG:T, EC:2.7.13.3, GO:0000155, GO:0005524, GO:0005886, KEGG:K18940, RefSeq:WP_000166801.1, SO:0001217, UniParc:UPI0000054A65, UniRef:UniRef100_Q9KJN3, UniRef:UniRef50_Q9KJN3, UniRef:UniRef90_Q9KJN3 contig_1 cds 1459574 1460233 - GCA000560365_01400 arlR response regulator transcription factor ArlR BlastRules:WP_000192137, GO:0000156, GO:0000976, GO:0005829, GO:0006355, GO:0032993, KEGG:K18941, RefSeq:WP_000192137.1, SO:0001217, UniParc:UPI000002E8B9, UniRef:UniRef100_Q9KJN4, UniRef:UniRef50_Q9KJN4, UniRef:UniRef90_Q9KJN4 contig_1 cds 1460703 1460903 - GCA000560365_01401 Transposase RefSeq:WP_000184341.1, SO:0001217, UniParc:UPI00015FD6ED, UniRef:UniRef100_A0A1S5Z3J3, UniRef:UniRef50_Q2FYL7, UniRef:UniRef90_Q2FYL7 contig_1 ncRNA 1460826 1461006 + GCA000560365_01402 tsr25 S. aureus tsr25 small RNA RFAM:RF02578, SO:0000655 contig_1 cds 1461147 1461632 + GCA000560365_01403 tnp IS200/IS605 family ISSep3 transposase COG:COG1943, COG:X, GO:0004803, IS:ISSep3, RefSeq:WP_000093392.1, SO:0001217, UniParc:UPI000005434D, UniRef:UniRef100_Q2G1W3, UniRef:UniRef50_E6LCX5, UniRef:UniRef90_A0AAE2ZW92 contig_1 cds 1461763 1462377 - GCA000560365_01404 pgpB Phosphatidic acid phosphatase type 2/haloperoxidase domain-containing protein COG:COG0671, COG:I, RefSeq:WP_000084780.1, SO:0001217, UniParc:UPI0000054A64, UniRef:UniRef100_Q2FYL6, UniRef:UniRef50_Q2FYL6, UniRef:UniRef90_Q2FYL6 contig_1 cds 1462394 1463464 - GCA000560365_01405 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase COG:COG0707, COG:M, EC:2.4.1.227, GO:0005886, GO:0005975, GO:0008360, GO:0009252, GO:0030259, GO:0050511, GO:0051301, GO:0051991, GO:0071555, KEGG:K02563, RefSeq:WP_000160913.1, SO:0001217, UniParc:UPI0000696C2E, UniRef:UniRef100_Q2FH20, UniRef:UniRef50_Q2FYL5, UniRef:UniRef90_Q2FYL5 contig_1 ncRNA 1462762 1462936 + GCA000560365_01406 S414 Staphylococcus sRNA 414 RFAM:RF02895, SO:0000655 contig_1 cds 1463476 1463985 - GCA000560365_01407 rimL N-acetyltransferase domain-containing protein COG:COG1670, COG:JO, RefSeq:WP_000620194.1, SO:0001217, UniParc:UPI00000D77C0, UniRef:UniRef100_Q2FYL4, UniRef:UniRef50_Q2FYL4, UniRef:UniRef90_Q2FYL4 contig_1 cds 1464385 1465875 - GCA000560365_01408 ctpA putative CtpA-like serine protease COG:COG0793, COG:O, EC:3.4.21.-, GO:0004175, GO:0005886, GO:0006508, GO:0007165, GO:0008236, GO:0030288, RefSeq:WP_000342125.1, SO:0001217, UniParc:UPI0000054A61, UniRef:UniRef100_Q2FYL3, UniRef:UniRef50_Q4L6D0, UniRef:UniRef90_Q99U67 contig_1 cds 1466067 1466288 - GCA000560365_01409 yozE UPF0346 protein SaurJH9_1481 COG:COG4479, COG:S, RefSeq:WP_000801007.1, SO:0001217, UniParc:UPI0000054A60, UniRef:UniRef100_Q2FYL1, UniRef:UniRef50_Q2FYL1, UniRef:UniRef90_Q2FYL1 contig_1 cds 1466288 1466788 - GCA000560365_01410 crr PTS system glucose-specific EIIA component COG:COG2190, COG:G, GO:0005737, GO:0009401, GO:0016301, GO:0046872, RefSeq:WP_000473652.1, SO:0001217, UniParc:UPI00000B5951, UniRef:UniRef100_Q5HFZ9, UniRef:UniRef50_Q81JY0, UniRef:UniRef90_P60856 contig_1 cds 1466800 1467228 - GCA000560365_01411 msrB Peptide methionine sulfoxide reductase MsrB COG:COG0229, COG:O, EC:1.8.4.12, GO:0005737, GO:0006979, GO:0030091, GO:0033743, RefSeq:WP_000913315.1, SO:0001217, UniParc:UPI0000054A5E, UniRef:UniRef100_P0A088, UniRef:UniRef50_P0A088, UniRef:UniRef90_P0A088 contig_1 cds 1467221 1467754 - GCA000560365_01412 msrA2 Peptide methionine sulfoxide reductase MsrA 2 EC:1.8.4.11, GO:0008113, GO:0033744, GO:0036211, RefSeq:WP_000159902.1, SO:0001217, UniParc:UPI0000054A5D, UniRef:UniRef100_P0A086, UniRef:UniRef50_P0A086, UniRef:UniRef90_P0A086 contig_1 cds 1467840 1468679 - GCA000560365_01413 fakB2 fatty acid kinase binding subunit FakB2 BlastRules:WP_000166059, COG:COG1307, COG:I, GO:0008289, RefSeq:WP_000166059.1, SO:0001217, UniParc:UPI0000054A5C, UniRef:UniRef100_Q8NWR0, UniRef:UniRef50_Q8NWR0, UniRef:UniRef90_Q8NWR0 contig_1 cds 1468694 1469173 - GCA000560365_01414 folA Dihydrofolate reductase COG:COG0262, COG:H, EC:1.5.1.3, GO:0004146, GO:0005829, GO:0006730, GO:0046452, GO:0046654, GO:0046655, GO:0050661, KEGG:K00287, RefSeq:WP_000175746.1, SO:0001217, UniParc:UPI0000054A5B, UniRef:UniRef100_Q5HFZ7, UniRef:UniRef50_Q5HFZ7, UniRef:UniRef90_Q5HFZ7 contig_1 cds 1469373 1470329 - GCA000560365_01415 thyA thymidylate synthase COG:COG0207, COG:F, EC:2.1.1.45, GO:0004799, GO:0005829, GO:0006231, GO:0006235, GO:0032259, KEGG:K00560, RefSeq:WP_000934885.1, SO:0001217, UniParc:UPI00003B168A, UniRef:UniRef100_Q2FYK5, UniRef:UniRef50_P00469, UniRef:UniRef90_P67046 contig_1 cds 1470753 1471190 - GCA000560365_01416 Bacilliredoxin SAV1428 GO:0045454, KEGG:K26958, RefSeq:WP_000995287.1, SO:0001217, UniParc:UPI00000D769E, UniRef:UniRef100_Q2FYK4, UniRef:UniRef50_Q2FYK4, UniRef:UniRef90_Q2FYK4 contig_1 cds 1471206 1472330 - GCA000560365_01417 cvfC Conserved virulence factor C GO:0016491, RefSeq:WP_000404653.1, SO:0001217, UniParc:UPI0000696C2F, UniRef:UniRef100_Q2FH09, UniRef:UniRef50_Q2FYK3, UniRef:UniRef90_Q2FH09 contig_1 cds 1472368 1472619 - GCA000560365_01418 Scaffold protein Nfu/NifU N-terminal domain-containing protein RefSeq:WP_000691942.1, SO:0001217, UniParc:UPI0000054A56, UniRef:UniRef100_Q2FYK2, UniRef:UniRef50_A0A0U1E823, UniRef:UniRef90_Q2FYK2 contig_1 cds 1473070 1473774 + GCA000560365_01419 yhhQ queuosine precursor transporter COG:COG1738, COG:J, GO:1990397, RefSeq:WP_000282171.1, SO:0001217, UniParc:UPI0000054A52, UniRef:UniRef100_Q2FYK0, UniRef:UniRef50_A0A380CFB3, UniRef:UniRef90_A0A0U1MKY9 contig_1 ncRNA 1473795 1474119 + GCA000560365_01420 S35 Staphylococcus sRNA 35 (srn_0335) RFAM:RF02894, SO:0000655 contig_1 cds 1473839 1473970 - GCA000560365_01421 Nitrogen regulation protein NIFR3 RefSeq:WP_000529138.1, SO:0001217, UniParc:UPI00004B5BE9, UniRef:UniRef100_Q2FYJ9, UniRef:UniRef50_Q2FYJ9, UniRef:UniRef90_Q2FYJ9 contig_1 cds 1474315 1474716 + GCA000560365_01422 rnhA RNase H type-1 domain-containing protein COG:COG0328, COG:L, RefSeq:WP_001062936.1, SO:0001217, UniParc:UPI00004B5BEA, UniRef:UniRef100_Q2FYJ7, UniRef:UniRef50_Q2FYJ7, UniRef:UniRef90_Q2FYJ7 contig_1 cds 1474775 1506040 - GCA000560365_01423 ebh Extracellular matrix-binding protein ebh GO:0005886, RefSeq:WP_001109328.1, SO:0001217, UniParc:UPI00006975D1, UniRef:UniRef100_Q2FH04, UniRef:UniRef50_Q2FYJ6, UniRef:UniRef90_Q2FH04 contig_1 cds 1506438 1507829 - GCA000560365_01424 norB multidrug efflux MFS transporter NorB BlastRules:WP_000414682, COG:COG0477, COG:GEPR, GO:0005886, GO:0022857, GO:0046677, KEGG:K08170, RefSeq:WP_000414684.1, SO:0001217, UniParc:UPI00004B5BEB, UniRef:UniRef100_Q5HFY7, UniRef:UniRef50_Q2FYJ5, UniRef:UniRef90_Q2FYJ5 contig_1 cds 1507986 1509308 - GCA000560365_01425 potE Amino acid permease COG:COG0531, COG:E, RefSeq:WP_000064778.1, SO:0001217, UniParc:UPI0000054A4A, UniRef:UniRef100_Q2FYJ4, UniRef:UniRef50_Q2FYJ4, UniRef:UniRef90_Q2FYJ4 contig_1 cds 1509339 1510379 - GCA000560365_01426 tdcB bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB COG:COG1171, COG:E, EC:4.3.1.19, GO:0000166, GO:0003941, GO:0004794, GO:0006565, GO:0006567, GO:0009097, GO:0030170, GO:0070689, RefSeq:WP_000210828.1, SO:0001217, UniParc:UPI0000054A49, UniRef:UniRef100_Q2FYJ3, UniRef:UniRef50_P0AGF6, UniRef:UniRef90_Q2FYJ3 contig_1 cds 1510474 1511592 - GCA000560365_01427 ald alanine dehydrogenase COG:COG0686, COG:E, EC:1.4.1.1, GO:0000286, GO:0005886, GO:0042853, KEGG:K00259, RefSeq:WP_000959424.1, SO:0001217, UniParc:UPI00000CAD0F, UniRef:UniRef100_Q2FH00, UniRef:UniRef50_Q2FYJ2, UniRef:UniRef90_Q2FYJ2 contig_1 cds 1512067 1512945 - GCA000560365_01428 exoIX 5'-3' exonuclease COG:COG0258, COG:L, RefSeq:WP_001133011.1, SO:0001217, UniParc:UPI0000054A47, UniRef:UniRef100_Q2FYJ1, UniRef:UniRef50_A0A380G7N4, UniRef:UniRef90_A0A641AB36 contig_1 cds 1512965 1516405 - GCA000560365_01429 era Dynamin N-terminal domain-containing protein COG:COG1159, COG:J, RefSeq:WP_000608523.1, SO:0001217, UniParc:UPI0000696C31, UniRef:UniRef100_A0A5A8VQ89, UniRef:UniRef50_K9B117, UniRef:UniRef90_Q2FYJ0 contig_1 cds 1516709 1518049 + GCA000560365_01430 piuB PepSY domain-containing protein COG:COG3182, COG:P, RefSeq:WP_000798979.1, SO:0001217, UniParc:UPI0000696C32, UniRef:UniRef100_A0A1S6CPW2, UniRef:UniRef50_Q2FYI9, UniRef:UniRef90_Q2FYI9 contig_1 cds 1518255 1518587 - GCA000560365_01431 DUF4889 domain-containing protein RefSeq:WP_000516800.1, SO:0001217, UniParc:UPI0000054A43, UniRef:UniRef100_Q2FYI7, UniRef:UniRef50_Q2FYI7, UniRef:UniRef90_Q2FYI7 contig_1 cds 1518671 1519816 - GCA000560365_01432 rlmL THUMP domain-containing protein COG:COG0116, COG:J, RefSeq:WP_000487150.1, SO:0001217, UniParc:UPI0000054A42, UniRef:UniRef100_Q2FYI6, UniRef:UniRef50_P50840, UniRef:UniRef90_Q2FYI6 contig_1 ncRNA 1520025 1520404 - GCA000560365_01433 RNaseP_bact_b Bacterial RNase P class B RFAM:RF00011, SO:0000386 contig_1 cds 1520250 1520366 - GCA000560365_01434 hypothetical protein SO:0001217, UniParc:UPI00000D78B8, UniRef:UniRef100_A0A0M5N980, UniRef:UniRef50_A0A0M5N980, UniRef:UniRef90_A0A0M5N980 contig_1 cds 1520467 1520811 - GCA000560365_01435 gpsB cell division regulator GpsB COG:COG3599, COG:D, GO:0005737, GO:0008360, GO:0051301, RefSeq:WP_001286320.1, SO:0001217, UniParc:UPI0000054A3F, UniRef:UniRef100_Q2FYI5, UniRef:UniRef50_Q2FYI5, UniRef:UniRef90_Q2FYI5 contig_1 cds 1520825 1521388 - GCA000560365_01436 yoqJ UPF0398 protein SaurJH1_1535 COG:COG4474, COG:X, RefSeq:WP_000241308.1, SO:0001217, UniParc:UPI00000D78A2, UniRef:UniRef100_Q2FYI4, UniRef:UniRef50_Q2FYI4, UniRef:UniRef90_Q2FYI4 contig_1 cds 1521381 1521782 - GCA000560365_01437 DUF1798 domain-containing protein SO:0001217, UniParc:UPI0000054C52, UniRef:UniRef100_Q2FYI3, UniRef:UniRef50_Q2FYI3, UniRef:UniRef90_Q2FYI3 contig_1 cds 1522271 1522897 + GCA000560365_01438 recU Holliday junction resolvase RecU COG:COG3331, COG:R, EC:3.1.21.10, GO:0000287, GO:0003676, GO:0004519, GO:0005737, GO:0006281, GO:0006310, GO:0007059, RefSeq:WP_001108889.1, SO:0001217, UniParc:UPI00000009F1, UniRef:UniRef100_Q2FGZ1, UniRef:UniRef50_Q8GN53, UniRef:UniRef90_Q8GN53 contig_1 cds 1522894 1525077 + GCA000560365_01439 mrcB peptidoglycan glycosyltransferase COG:COG0744, COG:M, RefSeq:WP_000138351.1, SO:0001217, UniParc:UPI0000054C56, UniRef:UniRef100_Q2FYI0, UniRef:UniRef50_F4NA87, UniRef:UniRef90_F4NA87 contig_1 cds 1525643 1525984 - GCA000560365_01440 YpoC-like domain-containing protein RefSeq:WP_000182019.1, SO:0001217, UniParc:UPI0000054C57, UniRef:UniRef100_Q2FYH9, UniRef:UniRef50_A0A143PAF6, UniRef:UniRef90_Q2FYH9 contig_1 cds 1525989 1526648 - GCA000560365_01441 nth endonuclease III COG:COG0177, COG:L, EC:4.2.99.18, GO:0006281, GO:0140078, RefSeq:WP_000253765.1, SO:0001217, UniParc:UPI00000D7789, UniRef:UniRef100_Q2FYH8, UniRef:UniRef50_A0A024P153, UniRef:UniRef90_A0A7X9ZHC0 contig_1 cds 1526638 1527324 - GCA000560365_01442 dnaD Chromosome replication initiation protein dnaD COG:COG3935, COG:L, RefSeq:WP_000362212.1, SO:0001217, UniParc:UPI0000054C59, UniRef:UniRef100_Q2FYH7, UniRef:UniRef50_A0A2T4RL44, UniRef:UniRef90_A0A2W2X8C3 contig_1 cds 1527652 1528944 - GCA000560365_01443 asnS asparagine--tRNA ligase COG:COG0017, COG:J, EC:6.1.1.22, GO:0003676, GO:0004816, GO:0005524, GO:0005737, GO:0006421, GO:0016740, KEGG:K01893, RefSeq:WP_000858789.1, SO:0001217, UniParc:UPI00004B5BF1, UniRef:UniRef100_Q2FYH6, UniRef:UniRef50_P54262, UniRef:UniRef90_Q2FYH6 contig_1 cds 1529266 1531959 - GCA000560365_01444 dinG 3'-5' exonuclease DinG COG:COG2176, COG:L, EC:3.1.-.-, GO:0003677, GO:0003887, GO:0004386, GO:0005524, GO:0005829, GO:0008408, GO:0016818, GO:0045004, KEGG:K03722, RefSeq:WP_031808148.1, SO:0001217, UniParc:UPI000447A3DD, UniRef:UniRef100_UPI000447A3DD, UniRef:UniRef50_Q6GGV4, UniRef:UniRef90_Q6GGV4 contig_1 cds 1531983 1532954 - GCA000560365_01445 birA Bifunctional ligase/repressor BirA COG:COG1654, COG:K, EC:6.3.4.15, KEGG:K03524, RefSeq:WP_000049919.1, SO:0001217, UniParc:UPI00004B5BF2, UniRef:UniRef100_A0A0E7NXW5, UniRef:UniRef50_A0A2K4AIL1, UniRef:UniRef90_A0A2K4AIL1 contig_1 cds 1532941 1534143 - GCA000560365_01446 cca CCA tRNA nucleotidyltransferase COG:COG0617, COG:J, EC:2.7.7.72, GO:0000049, GO:0000287, GO:0001680, GO:0005524, GO:0016779, GO:0042245, GO:0160016, RefSeq:WP_000361544.1, SO:0001217, UniParc:UPI00004B5BF3, UniRef:UniRef100_Q5HFW6, UniRef:UniRef50_Q49XR3, UniRef:UniRef90_Q99U32 contig_1 cds 1534148 1535290 - GCA000560365_01447 bshA N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA COG:COG0438, COG:M, GO:0016757, GO:0071793, RefSeq:WP_000690027.1, SO:0001217, UniParc:UPI0000696C34, UniRef:UniRef100_Q2G255, UniRef:UniRef50_P42982, UniRef:UniRef90_Q2G255 contig_1 cds 1535531 1535848 - GCA000560365_01448 mazG NTP pyrophosphohydrolase MazG-like domain-containing protein COG:COG1694, COG:V, RefSeq:WP_000839926.1, SO:0001217, UniParc:UPI0000054C60, UniRef:UniRef100_Q2G254, UniRef:UniRef50_K8ZP05, UniRef:UniRef90_Q2G254 contig_1 cds 1536185 1536883 - GCA000560365_01449 yugP Putative membrane protease YugP COG:COG2738, COG:O, KEGG:K06973, SO:0001217, UniParc:UPI00000CAC92, UniRef:UniRef100_A0A7Z7W209, UniRef:UniRef50_A0A7U7PY90, UniRef:UniRef90_A0A7U7PY90 contig_1 cds 1536937 1537524 - GCA000560365_01450 ypjA DUF1405 domain-containing protein COG:COG4347, COG:S, RefSeq:WP_000152734.1, SO:0001217, UniParc:UPI0000054C62, UniRef:UniRef100_Q2FYH4, UniRef:UniRef50_Q2FYH4, UniRef:UniRef90_Q2FYH4 contig_1 cds 1537514 1538101 - GCA000560365_01451 ypiB UPF0302 protein SA1295 COG:COG5582, COG:S, SO:0001217, UniParc:UPI0002CC314F, UniRef:UniRef100_Q2FGX8, UniRef:UniRef50_Q2FYH3, UniRef:UniRef90_Q2FYH3 contig_1 cds 1538103 1539347 - GCA000560365_01452 tadD Tetratricopeptide repeat protein COG:COG5010, COG:W, RefSeq:WP_000389524.1, SO:0001217, UniParc:UPI0000054C64, UniRef:UniRef100_Q2FYH2, UniRef:UniRef50_Q49XR9, UniRef:UniRef90_A0AA40JLE9 contig_1 cds 1539354 1540652 - GCA000560365_01453 aroA 3-phosphoshikimate 1-carboxyvinyltransferase COG:COG0128, COG:E, EC:2.5.1.19, GO:0003866, GO:0005737, GO:0008652, GO:0009073, GO:0009423, RefSeq:WP_000245895.1, SO:0001217, UniParc:UPI0000125F53, UniRef:UniRef100_Q05615, UniRef:UniRef50_Q05615, UniRef:UniRef90_Q05615 contig_1 cds 1540662 1541726 - GCA000560365_01454 aroB 3-dehydroquinate synthase COG:COG0337, COG:E, EC:4.2.3.4, GO:0000166, GO:0003856, GO:0005737, GO:0008652, GO:0009073, GO:0009423, GO:0046872, KEGG:K01735, RefSeq:WP_000776323.1, SO:0001217, UniParc:UPI00004B5BF8, UniRef:UniRef100_Q2FGX5, UniRef:UniRef50_Q6GGU4, UniRef:UniRef90_Q6GGU4 contig_1 cds 1541752 1542918 - GCA000560365_01455 aroC chorismate synthase COG:COG0082, COG:E, EC:4.2.3.5, GO:0004107, GO:0005829, GO:0008652, GO:0009073, GO:0009423, GO:0010181, KEGG:K01736, RefSeq:WP_001269929.1, SO:0001217, UniParc:UPI00004B5BF9, UniRef:UniRef100_Q2FYG9, UniRef:UniRef50_Q59803, UniRef:UniRef90_Q59803 contig_1 cds 1543304 1543504 - GCA000560365_01456 hypothetical protein RefSeq:WP_000789522.1, SO:0001217, UniParc:UPI0000054C68, UniRef:UniRef100_Q2FYG8, UniRef:UniRef50_Q2FYG8, UniRef:UniRef90_Q2FYG8 contig_1 cds 1543713 1544162 - GCA000560365_01457 ndk nucleoside-diphosphate kinase COG:COG0105, COG:F, EC:2.7.4.6, GO:0004550, GO:0005524, GO:0005737, GO:0006183, GO:0006228, GO:0006241, GO:0046872, RefSeq:WP_000442480.1, SO:0001217, UniParc:UPI000012FEC6, UniRef:UniRef100_Q2FYG7, UniRef:UniRef50_Q2FYG7, UniRef:UniRef90_Q2FYG7 contig_1 cds 1544254 1545213 - GCA000560365_01458 ispA Farnesyl pyrophosphate synthetase COG:COG0142, COG:H, EC:2.5.1.30, KEGG:K24873, RefSeq:WP_001096471.1, SO:0001217, UniParc:UPI00000CABC5, UniRef:UniRef100_A0A0D6HKK2, UniRef:UniRef50_A0A0D6HKK2, UniRef:UniRef90_A0A0D6HKK2 contig_1 cds 1545215 1545940 - GCA000560365_01459 menG demethylmenaquinone methyltransferase COG:COG2226, COG:HJ, EC:2.1.1.163, GO:0008168, GO:0009234, GO:0032259, GO:0043770, RefSeq:WP_000774684.1, SO:0001217, UniParc:UPI0000054C6C, UniRef:UniRef100_Q5HFV2, UniRef:UniRef50_P31113, UniRef:UniRef90_Q6GGU0 contig_1 cds 1545943 1546515 - GCA000560365_01460 Heptaprenyl pyrophosphate synthase subunit A EC:2.5.1.30, KEGG:K00805, RefSeq:WP_000450553.1, SO:0001217, UniParc:UPI0000054C6D, UniRef:UniRef100_Q2FYG4, UniRef:UniRef50_Q2FYG4, UniRef:UniRef90_Q2FYG4 contig_1 cds 1546946 1547218 - GCA000560365_01461 hup DNA-binding protein HU COG:B, COG:COG0776, GO:0003677, GO:0005829, GO:0030261, GO:0030527, RefSeq:WP_001043863.1, SO:0001217, UniParc:UPI0000054C6E, UniRef:UniRef100_Q5HFV0, UniRef:UniRef50_P0A3H3, UniRef:UniRef90_Q5HFV0 contig_1 cds 1547389 1548387 - GCA000560365_01462 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase COG:C, COG:COG0240, EC:1.1.1.94, GO:0005829, GO:0005975, GO:0006650, GO:0008654, GO:0009331, GO:0046167, GO:0046168, GO:0047952, GO:0051287, RefSeq:WP_000161738.1, SO:0001217, UniParc:UPI0000054C6F, UniRef:UniRef100_Q2FYG1, UniRef:UniRef50_Q5XE03, UniRef:UniRef90_Q2FYG1 contig_1 cds 1548404 1549714 - GCA000560365_01463 der ribosome biogenesis GTPase Der COG:COG1160, COG:J, EC:3.6.5.-, GO:0003924, GO:0005525, GO:0005737, GO:0042254, GO:0043022, KEGG:K03977, RefSeq:WP_000165536.1, SO:0001217, UniParc:UPI0000696C3A, UniRef:UniRef100_Q2FGW7, UniRef:UniRef50_P50743, UniRef:UniRef90_Q2FYG0 contig_1 cds 1549936 1551111 - GCA000560365_01464 rpsA 30S ribosomal protein S1 COG:COG0539, COG:J, GO:0003676, GO:0003729, GO:0003735, GO:0006412, GO:0022627, RefSeq:WP_000133954.1, SO:0001217, UniParc:UPI000004801E, UniRef:UniRef100_Q5HFU7, UniRef:UniRef50_Q49XT0, UniRef:UniRef90_Q6GGT5 contig_1 cds 1551823 1552482 - GCA000560365_01465 cmk (d)CMP kinase COG:COG0283, COG:F, EC:2.7.4.25, GO:0004127, GO:0005524, GO:0005829, GO:0006220, GO:0015949, GO:0036430, GO:0036431, RefSeq:WP_000644391.1, SO:0001217, UniParc:UPI0000054C73, UniRef:UniRef100_Q5HFU6, UniRef:UniRef50_B9DNU7, UniRef:UniRef90_Q6GGT4 contig_1 cds 1552559 1553527 + GCA000560365_01466 ansA Alpha/beta hydrolase fold-3 domain-containing protein COG:COG0252, COG:JE, RefSeq:WP_000681756.1, SO:0001217, UniParc:UPI00000541D7, UniRef:UniRef100_Q2FYF4, UniRef:UniRef50_K8E262, UniRef:UniRef90_A0A391A6D3 contig_1 cds 1553642 1554628 - GCA000560365_01467 trxB FAD-binding protein COG:COG0492, COG:O, EC:1.8.1.-, KEGG:K26960, RefSeq:WP_001174260.1, SO:0001217, UniParc:UPI00000D9E08, UniRef:UniRef100_Q2FYF3, UniRef:UniRef50_A0A380G2E5, UniRef:UniRef90_A0A2K4AII5 contig_1 cds 1555030 1556490 - GCA000560365_01468 ebp cell surface elastin binding protein GO:0005886, RefSeq:WP_000069282.1, SO:0001217, UniParc:UPI00000B839A, UniRef:UniRef100_Q2FYF1, UniRef:UniRef50_Q2FYF1, UniRef:UniRef90_Q2FYF1, VFDB:VFC0001, VFDB:VFG001278 contig_1 cds 1556643 1558022 - GCA000560365_01469 recQ ATP-dependent DNA helicase COG:COG0514, COG:L, RefSeq:WP_000902119.1, SO:0001217, UniParc:UPI00000541DB, UniRef:UniRef100_Q2FYF0, UniRef:UniRef50_A0A380G6G1, UniRef:UniRef90_A0A390B2J9 contig_1 cds 1558012 1558965 - GCA000560365_01470 ypbB Helicase Helix-turn-helix domain-containing protein COG:COG4955, COG:S, RefSeq:WP_001163801.1, SO:0001217, UniParc:UPI00000D785B, UniRef:UniRef100_Q2FYE9, UniRef:UniRef50_Q2FYE9, UniRef:UniRef90_Q2FYE9 contig_1 cds 1559073 1559321 + GCA000560365_01471 fer Ferredoxin COG:C, COG:COG1141, RefSeq:WP_001151997.1, SO:0001217, UniParc:UPI00000D7814, UniRef:UniRef100_A0A7Z7QYV2, UniRef:UniRef50_P50727, UniRef:UniRef90_D3G002 contig_1 cds 1559427 1559972 - GCA000560365_01472 ribU Riboflavin transporter RibU COG:COG3601, COG:H, GO:0005886, GO:0032217, KEGG:K23675, RefSeq:WP_001186912.1, SO:0001217, UniParc:UPI00000D76F1, UniRef:UniRef100_Q2FYE7, UniRef:UniRef50_E5QVT2, UniRef:UniRef90_E5QVT2 contig_1 ncRNA-region 1560034 1560168 - FMN riboswitch aptamer (RFN element) RFAM:RF00050, SO:0000035 contig_1 cds 1560569 1561483 - GCA000560365_01473 DUF1672 domain-containing protein RefSeq:WP_000913219.1, SO:0001217, UniParc:UPI00000541E1, UniRef:UniRef100_Q2FYE5, UniRef:UniRef50_Q2FYE5, UniRef:UniRef90_Q2FYE5 contig_1 cds 1561498 1561704 - GCA000560365_01474 hypothetical protein RefSeq:WP_001033757.1, SO:0001217, UniParc:UPI00004B5BFB, UniRef:UniRef100_Q2FYE4, UniRef:UniRef50_Q2FYE4, UniRef:UniRef90_Q2FYE4 contig_1 cds 1561697 1562575 - GCA000560365_01475 Lipoprotein RefSeq:WP_001548827.1, SO:0001217, UniParc:UPI00004B5BFC, UniRef:UniRef100_A0A1S5YLQ0, UniRef:UniRef50_A0A0H3JSF1, UniRef:UniRef90_Q2FYE3 contig_1 cds 1562692 1563609 - GCA000560365_01476 DUF1672 domain-containing protein RefSeq:WP_000476873.1, SO:0001217, UniParc:UPI00000541E4, UniRef:UniRef100_Q2FYE2, UniRef:UniRef50_A0A0H3JSF1, UniRef:UniRef90_Q2FYE2 contig_1 cds 1564134 1565111 - GCA000560365_01477 lukF-PV Panton-Valentine bi-component leukocidin subunit F NCBIProtein:BAA24008.1, SO:0001217, UniParc:UPI000009C32D, UniRef:UniRef100_A0A9X9K0A9, UniRef:UniRef50_Q2FVK1, UniRef:UniRef90_Q53747, VFDB:VFC0235, VFDB:VFG001276 contig_1 cds 1565113 1566051 - GCA000560365_01478 lukS-PV Panton-Valentine bi-component leukocidin subunit S NCBIProtein:AGW33874.1, RefSeq:WP_000239545.1, SO:0001217, UniParc:UPI00000D9E0F, UniRef:UniRef100_A0A977TES7, UniRef:UniRef50_O54081, UniRef:UniRef90_A0FGS6, VFDB:VFC0235, VFDB:VFG001277 contig_1 cds 1566441 1567895 - GCA000560365_01479 putative autolysin PH EC:3.5.1.28, GO:0008745, GO:0009253, GO:0030288, GO:0031640, GO:0042742, GO:0043093, GO:0071555, KEGG:K01448, RefSeq:WP_000909220.1, SO:0001217, UniParc:UPI000009B886, UniRef:UniRef100_A0A977TEL1, UniRef:UniRef50_Q2FYD8, UniRef:UniRef90_Q2FYD8 contig_1 cds 1567906 1568208 - GCA000560365_01480 phage holin GO:0140911, RefSeq:WP_000339146.1, SO:0001217, UniParc:UPI000009C019, UniRef:UniRef100_A0A977TEN7, UniRef:UniRef50_M1T2Y5, UniRef:UniRef90_M1T2Y5 contig_1 cds 1568344 1568643 - GCA000560365_01481 DUF2951 domain-containing protein RefSeq:WP_000466784.1, SO:0001217, UniParc:UPI000009BE83, UniRef:UniRef100_Q4ZCR9, UniRef:UniRef50_A0EWN0, UniRef:UniRef90_A0EWN0 contig_1 cds 1568689 1568853 - GCA000560365_01482 xkdX XkdX family protein RefSeq:WP_000916020.1, SO:0001217, UniParc:UPI00000541EC, UniRef:UniRef100_Q4ZCS0, UniRef:UniRef50_B2ZZ00, UniRef:UniRef90_M9QX31 contig_1 cds 1568846 1569235 - GCA000560365_01483 DUF2977 domain-containing protein RefSeq:WP_001166599.1, SO:0001217, UniParc:UPI00000541ED, UniRef:UniRef100_Q2FYD4, UniRef:UniRef50_A0A0K1LKC8, UniRef:UniRef90_A0A0K1LKC8 contig_1 cds 1569235 1570701 - GCA000560365_01484 bppU BppU N-terminal domain-containing protein RefSeq:WP_000067127.1, SO:0001217, UniParc:UPI0000696C3D, UniRef:UniRef100_A0A977XQ24, UniRef:UniRef50_B5WZQ8, UniRef:UniRef90_B5WZQ8 contig_1 cds 1570701 1572611 - GCA000560365_01485 P68 RBP/TagC-like beta propeller domain-containing protein RefSeq:WP_000429558.1, SO:0001217, UniParc:UPI0000696C3E, UniRef:UniRef100_A0A977XRN8, UniRef:UniRef50_R4WAL5, UniRef:UniRef90_R4WAL5 contig_1 cds 1572627 1572917 - GCA000560365_01486 Phage protein RefSeq:WP_000179858.1, SO:0001217, UniParc:UPI000009BCE2, UniRef:UniRef100_A0AAE7DSH6, UniRef:UniRef50_R4WEC3, UniRef:UniRef90_R4WEC3 contig_1 cds 1572917 1574500 - GCA000560365_01487 Peptidase RefSeq:WP_000384474.1, SO:0001217, UniParc:UPI00000D9E12, UniRef:UniRef100_M1SNW3, UniRef:UniRef50_M9QX27, UniRef:UniRef90_R4WCV5 contig_1 cds 1574509 1575333 - GCA000560365_01488 Siphovirus-type tail component RIFT-related domain-containing protein RefSeq:WP_001190533.1, SO:0001217, UniParc:UPI00000541F2, UniRef:UniRef100_Q2FYC9, UniRef:UniRef50_R4WAV3, UniRef:UniRef90_R4WAV3 contig_1 cds 1575333 1581533 - GCA000560365_01489 lysostaphin RefSeq:WP_001003408.1, SO:0001217, UniParc:UPI0000696C3F, UniRef:UniRef100_A0A977TFF5, UniRef:UniRef50_Q2FYC8, UniRef:UniRef90_Q2FYC8 contig_1 cds 1581547 1581705 - GCA000560365_01490 Phage protein RefSeq:WP_000438833.1, SO:0001217, UniParc:UPI00000541F4, UniRef:UniRef100_A0AAE9P536, UniRef:UniRef50_A0AAE9P536, UniRef:UniRef90_A0AAE9P536 contig_1 cds 1581747 1582097 - GCA000560365_01491 gpG phage tail assembly chaperone G RefSeq:WP_000589167.1, SO:0001217, UniParc:UPI00000541F5, UniRef:UniRef100_A0A2K9VBQ8, UniRef:UniRef50_A0A0K1LKJ0, UniRef:UniRef90_A0A0K1LKJ0 contig_1 cds 1582155 1582610 - GCA000560365_01492 ORF023 RefSeq:WP_000169127.1, SO:0001217, UniParc:UPI00003B16B7, UniRef:UniRef100_A0A2K9VBR9, UniRef:UniRef50_Q4ZCT1, UniRef:UniRef90_Q4ZCT1 contig_1 cds 1582702 1583343 - GCA000560365_01493 Tail protein RefSeq:WP_000807536.1, SO:0001217, UniParc:UPI00000541F7, UniRef:UniRef100_Q2G2K1, UniRef:UniRef50_A0A2T4PZ36, UniRef:UniRef90_A0A9X9JV04 contig_1 cds 1583378 1583773 - GCA000560365_01494 DUF3168 domain-containing protein RefSeq:WP_001023806.1, SO:0001217, UniParc:UPI00000541F8, UniRef:UniRef100_A0A2K9VBQ2, UniRef:UniRef50_A0A1L7RV34, UniRef:UniRef90_R4WAV1 contig_1 cds 1583774 1584175 - GCA000560365_01495 PhiSLT protein RefSeq:WP_000110023.1, SO:0001217, UniParc:UPI00000541F9, UniRef:UniRef100_Q2G2S5, UniRef:UniRef50_A0A1L7RVH1, UniRef:UniRef90_A0A6G4ZMM4 contig_1 cds 1584172 1584504 - GCA000560365_01496 Phage protein RefSeq:WP_000395498.1, SO:0001217, UniParc:UPI00000541FA, UniRef:UniRef100_Q2G2S4, UniRef:UniRef50_M9QX19, UniRef:UniRef90_A0A9X9P522 contig_1 cds 1584516 1584794 - GCA000560365_01497 head-tail connector protein GO:0016032, RefSeq:WP_000050973.1, SO:0001217, UniParc:UPI00000541FB, UniRef:UniRef100_A0AAE9P379, UniRef:UniRef50_R4WAL3, UniRef:UniRef90_R4WAL3 contig_1 cds 1584863 1586026 - GCA000560365_01498 phage major capsid protein GO:0005198, GO:0019068, GO:0044423, RefSeq:WP_001142734.1, SO:0001217, UniParc:UPI000009B7B2, UniRef:UniRef100_A0A9E7MV44, UniRef:UniRef50_A0A1L7RSR1, UniRef:UniRef90_M1SVC5 contig_1 cds 1586038 1586811 - GCA000560365_01499 ATP-dependent Clp protease proteolytic subunit RefSeq:WP_000061866.1, SO:0001217, UniParc:UPI000009C1AD, UniRef:UniRef100_Q2G2S1, UniRef:UniRef50_A0A2T4PZ65, UniRef:UniRef90_A0AAJ4YUJ4 contig_1 cds 1586795 1588033 - GCA000560365_01500 phage portal protein GO:0005198, GO:0019068, GO:0044423, RefSeq:WP_001100664.1, SO:0001217, UniParc:UPI0000696C40, UniRef:UniRef100_A0A977XRN3, UniRef:UniRef50_A0A077RGY7, UniRef:UniRef90_A0A977XRN3 contig_1 cds 1588038 1589729 - GCA000560365_01501 Terminase large subunit RefSeq:WP_000153540.1, SO:0001217, UniParc:UPI0000505959, UniRef:UniRef100_A0A8E7KZI2, UniRef:UniRef50_A0A429X5P5, UniRef:UniRef90_B5WZP1 contig_1 cds 1589719 1590024 - GCA000560365_01502 Terminase small subunit RefSeq:WP_000778933.1, SO:0001217, UniParc:UPI0000054200, UniRef:UniRef100_Q2FYC5, UniRef:UniRef50_A0A073K507, UniRef:UniRef90_A0A2I6PDN6 contig_1 cds 1590151 1590465 - GCA000560365_01503 HNH endonuclease RefSeq:WP_000160686.1, SO:0001217, UniParc:UPI0000696C41, UniRef:UniRef100_A0A977XQL3, UniRef:UniRef50_A0A0H3JWK3, UniRef:UniRef90_A0A977XQL3 contig_1 cds 1590622 1591059 - GCA000560365_01504 Transcriptional regulator RefSeq:WP_000528512.1, SO:0001217, UniParc:UPI000009B96E, UniRef:UniRef100_A0A345AQA4, UniRef:UniRef50_R4WCU7, UniRef:UniRef90_R4WCU7 contig_1 cds 1591072 1592430 - GCA000560365_01505 DNA helicase SO:0001217, UniParc:UPI00016997E7, UniRef:UniRef100_A0A1S6A291, UniRef:UniRef50_A0A411BM78, UniRef:UniRef90_A0A411BM78 contig_1 cds 1592420 1592710 - GCA000560365_01506 VRR-NUC domain-containing protein RefSeq:WP_001548892.1, SO:0001217, UniParc:UPI0000696C43, UniRef:UniRef100_A0A977TER0, UniRef:UniRef50_A7TWI5, UniRef:UniRef90_A7TWI5 contig_1 cds 1593051 1595498 - GCA000560365_01507 Virulence-associated protein E-like domain-containing protein RefSeq:WP_000884870.1, SO:0001217, UniParc:UPI00000D9E1B, UniRef:UniRef100_U5U4T5, UniRef:UniRef50_A0A419SQH7, UniRef:UniRef90_U5U4T5 contig_1 cds 1595553 1595759 + GCA000560365_01508 hypothetical protein RefSeq:WP_001548893.1, SO:0001217, UniParc:UPI00000D9E1C, UniRef:UniRef100_A0A1X9IGZ9, UniRef:UniRef50_A0A1X9IGZ9, UniRef:UniRef90_A0A1X9IGZ9 contig_1 cds 1595786 1595986 - GCA000560365_01509 DUF1514 domain-containing protein RefSeq:WP_000265252.1, SO:0001217, UniParc:UPI00000D9E1D, UniRef:UniRef100_A0A977TFN6, UniRef:UniRef50_A0A0K1LL54, UniRef:UniRef90_A0A0K1LL54 contig_1 sorf 1595989 1596060 - GCA000560365_01510 Hypothetical phage protein SO:0001217, UniParc:UPI00003B16C3, UniRef:UniRef100_A0A7U7EV04, UniRef:UniRef50_A0A7U7EV04, UniRef:UniRef90_A0A7U7EV04 contig_1 cds 1596054 1596206 - GCA000560365_01511 rinB transcriptional activator RinB RefSeq:WP_000595263.1, SO:0001217, UniParc:UPI00003B1AA3, UniRef:UniRef100_A0AAE7AJY6, UniRef:UniRef50_A0A2I6PE89, UniRef:UniRef90_A0A9X9K0S8 contig_1 cds 1596203 1596592 - GCA000560365_01512 secreted protein SO:0001217, UniRef:UniRef50_C8CH08, UniRef:UniRef90_UPI0013665542 contig_1 cds 1596582 1596818 - GCA000560365_01513 Phage protein SO:0001217, UniRef:UniRef50_A9CR94, UniRef:UniRef90_A9CR94 contig_1 cds 1596811 1597014 - GCA000560365_01514 Phage protein RefSeq:WP_000141180.1, SO:0001217, UniParc:UPI0000696C44, UniRef:UniRef100_A0A977XPX7, UniRef:UniRef50_A0A2K4ANQ7, UniRef:UniRef90_A0A2K4ANQ7 contig_1 cds 1597011 1597217 - GCA000560365_01515 DUF1381 domain-containing protein RefSeq:WP_000195794.1, SO:0001217, UniParc:UPI0000696C45, UniRef:UniRef100_A0A977XR61, UniRef:UniRef50_A9CR91, UniRef:UniRef90_A0A0C6ELC0 contig_1 cds 1597254 1597790 - GCA000560365_01516 dUTPase RefSeq:WP_000185671.1, SO:0001217, UniParc:UPI0000696C46, UniRef:UniRef100_A0A977XQL0, UniRef:UniRef50_A0A7U7JTE6, UniRef:UniRef90_U5U798 contig_1 cds 1597783 1598031 - GCA000560365_01517 DUF1024 domain-containing protein RefSeq:WP_001065039.1, SO:0001217, UniParc:UPI0000696C47, UniRef:UniRef100_A0A977TFE3, UniRef:UniRef50_A9CR86, UniRef:UniRef90_A0A0N9BAY6 contig_1 cds 1598046 1598288 - GCA000560365_01518 Phage protein RefSeq:WP_000132194.1, SO:0001217, UniParc:UPI0000696C48, UniRef:UniRef100_A0A977XQ34, UniRef:UniRef50_A9CR79, UniRef:UniRef90_M9NRL7 contig_1 cds 1598303 1598503 - GCA000560365_01519 Phage protein RefSeq:WP_000235324.1, SO:0001217, UniParc:UPI00003B16CD, UniRef:UniRef100_A0A977XRQ6, UniRef:UniRef50_C5I650, UniRef:UniRef90_C5I650 contig_1 cds 1598506 1598763 - GCA000560365_01520 DUF3310 domain-containing protein RefSeq:WP_000022728.1, SO:0001217, UniParc:UPI00000D9E28, UniRef:UniRef100_A0AAE7AJX8, UniRef:UniRef50_B2ZYW4, UniRef:UniRef90_B2ZYW4 contig_1 cds 1598763 1599164 - GCA000560365_01521 PVL family protein RefSeq:WP_000113974.1, SO:0001217, UniParc:UPI00000D9E29, UniRef:UniRef100_A0A2K9VBY6, UniRef:UniRef50_A0A2I6PEE6, UniRef:UniRef90_A0A2D1G5N4 contig_1 cds 1599164 1599349 - GCA000560365_01522 DUF3113 domain-containing protein RefSeq:WP_001164629.1, SO:0001217, UniParc:UPI0000054219, UniRef:UniRef100_Q2FYA2, UniRef:UniRef50_G5JH61, UniRef:UniRef90_M9QQK5 contig_1 cds 1599362 1601323 - GCA000560365_01523 DNA polymerase EC:2.7.7.7, KEGG:K02334, SO:0001217, UniParc:UPI00000D9E2A, UniRef:UniRef100_A0A977TEK8, UniRef:UniRef50_B5WZM5, UniRef:UniRef90_B5WZM5 contig_1 cds 1601382 1601939 - GCA000560365_01524 DUF2815 domain-containing protein RefSeq:WP_000645048.1, SO:0001217, UniParc:UPI00000D9E2B, UniRef:UniRef100_M1TB24, UniRef:UniRef50_B8I925, UniRef:UniRef90_M1TB24 contig_1 cds 1601965 1603131 - GCA000560365_01525 DUF2800 domain-containing protein RefSeq:WP_000762552.1, SO:0001217, UniParc:UPI00000D9E2C, UniRef:UniRef100_A0AAE7DT35, UniRef:UniRef50_B5WZM3, UniRef:UniRef90_B5WZM3 contig_1 cds 1603128 1603490 - GCA000560365_01526 Phage protein RefSeq:WP_000985979.1, SO:0001217, UniParc:UPI00000D9E2D, UniRef:UniRef100_A0AAE7AJY3, UniRef:UniRef50_A0A0K1LKE9, UniRef:UniRef90_A0A0K1LKE9 contig_1 cds 1603504 1603764 - GCA000560365_01527 DUF1108 domain-containing protein RefSeq:WP_000291481.1, SO:0001217, UniParc:UPI0000696C4A, UniRef:UniRef100_A0A977XQ15, UniRef:UniRef50_A0A2I6PDT0, UniRef:UniRef90_A0A977XQ15 contig_1 cds 1603769 1604071 - GCA000560365_01528 DUF2482 domain-containing protein RefSeq:WP_000163431.1, SO:0001217, UniParc:UPI00015FD725, UniRef:UniRef100_A0A977XRM7, UniRef:UniRef50_A0A2I6PE07, UniRef:UniRef90_A0A2I6PE07 contig_1 cds 1604064 1604381 - GCA000560365_01529 Phage protein RefSeq:WP_000829612.1, SO:0001217, UniParc:UPI0000696C4B, UniRef:UniRef100_A0A977XPX5, UniRef:UniRef50_M9NUK8, UniRef:UniRef90_M9NUK8 contig_1 cds 1604647 1604910 - GCA000560365_01530 DNA-binding protein SO:0001217, UniRef:UniRef50_A0AAE8Z0C4, UniRef:UniRef90_A0AAE8Z0C4 contig_1 cds 1604935 1605150 - GCA000560365_01531 Phage protein RefSeq:WP_001036299.1, SO:0001217, UniParc:UPI00003B1A93, UniRef:UniRef100_A0A977TFT7, UniRef:UniRef50_A0A898CJM3, UniRef:UniRef90_A0A898CJM3 contig_1 cds 1605197 1605436 + GCA000560365_01532 hypothetical protein RefSeq:WP_001548903.1, SO:0001217, UniParc:UPI00003B1A92, UniRef:UniRef100_A0A9E7MVJ1, UniRef:UniRef50_A0A0H3U2T9, UniRef:UniRef90_A0A0H3U2T9 contig_1 cds 1605433 1605609 - GCA000560365_01533 hypothetical protein RefSeq:WP_001001356.1, SO:0001217, UniParc:UPI00003B1A91, UniRef:UniRef100_A0A2C9TR45, UniRef:UniRef50_A0A2C9TR45, UniRef:UniRef90_A0A2C9TR45 contig_1 cds 1605693 1605884 - GCA000560365_01534 XRE family transcriptional regulator RefSeq:WP_001115060.1, SO:0001217, UniParc:UPI00000CAE86, UniRef:UniRef100_A0A977XRP8, UniRef:UniRef50_A0AAE7P0Q9, UniRef:UniRef90_A0AA40JN51 contig_1 cds 1606045 1606374 + GCA000560365_01535 DNA-binding helix-turn-helix protein RefSeq:WP_000429766.1, SO:0001217, UniParc:UPI00000CAE85, UniRef:UniRef100_A0AAE7ANM5, UniRef:UniRef50_A0A364JKZ8, UniRef:UniRef90_A0A0K1LKK8 contig_1 cds 1606378 1606848 + GCA000560365_01536 Toxin SO:0001217, UniParc:UPI0001F62F35, UniRef:UniRef100_A0A977TEK1, UniRef:UniRef50_M9NUH9, UniRef:UniRef90_A0A0H3JQL7 contig_1 cds 1606866 1607300 + GCA000560365_01537 Lipoprotein RefSeq:WP_000755722.1, SO:0001217, UniParc:UPI0000696C4E, UniRef:UniRef100_A0A977TF97, UniRef:UniRef50_A0A641ACN8, UniRef:UniRef90_A0A641ACN8 contig_1 cds 1607329 1607724 + GCA000560365_01538 Phage protein RefSeq:WP_000449655.1, SO:0001217, UniParc:UPI000009B36B, UniRef:UniRef100_A0A2K9VBV5, UniRef:UniRef50_A0ZS06, UniRef:UniRef90_A0A0H3JWE4 contig_1 cds 1607835 1607960 + GCA000560365_01539 Staphylokinase RefSeq:WP_000227849.1, SO:0001217, UniParc:UPI00016991FC, UniRef:UniRef100_A0A9X9JWJ2, UniRef:UniRef50_A0A9X9JZX3, UniRef:UniRef90_A0A9X9JWJ2 contig_1 cds 1607957 1608571 - GCA000560365_01540 ATPase RefSeq:WP_000191466.1, SO:0001217, UniParc:UPI000009BB14, UniRef:UniRef100_Q4ZCR5, UniRef:UniRef50_O80069, UniRef:UniRef90_O80069 contig_1 cds 1608697 1609902 + GCA000560365_01541 Integrase RefSeq:WP_000264751.1, SO:0001217, UniParc:UPI000009C32E, UniRef:UniRef100_A0A345AQ68, UniRef:UniRef50_P20709, UniRef:UniRef90_A0A977TEW5 contig_1 cds 1609945 1611099 - GCA000560365_01542 Lipoprotein SO:0001217, UniParc:UPI00024E4E62, UniRef:UniRef100_A0A2C6N4I3, UniRef:UniRef50_A0A0E1X540, UniRef:UniRef90_A0A7U7JUS1 contig_1 cds 1611126 1611971 - GCA000560365_01543 Lipoprotein SO:0001217, UniParc:UPI00024E4C34, UniRef:UniRef100_A0A133PWN9, UniRef:UniRef50_A0A0E1X540, UniRef:UniRef90_A0AAP8CQY8 contig_1 cds 1611964 1612893 - GCA000560365_01544 Lipoprotein RefSeq:WP_001548912.1, SO:0001217, UniParc:UPI0000054310, UniRef:UniRef100_Q2FY81, UniRef:UniRef50_A0A0H3JSF1, UniRef:UniRef90_Q2FY81 contig_1 cds 1613138 1614889 - GCA000560365_01545 srrB two-component system sensor histidine kinase SrrB BlastRules:WP_000987769, COG:COG5002, COG:T, EC:2.7.13.3, GO:0000155, GO:0000156, GO:0005524, GO:0005886, GO:0007234, GO:0030295, KEGG:K07651, RefSeq:WP_000987769.1, SO:0001217, UniParc:UPI00004B5BFF, UniRef:UniRef100_Q2FY80, UniRef:UniRef50_Q9L523, UniRef:UniRef90_Q9L523 contig_1 cds 1614870 1615595 - GCA000560365_01546 srrA two-component system response regulator SrrA BlastRules:WP_000064078, COG:COG0745, COG:TK, GO:0000156, GO:0000976, GO:0005829, GO:0006355, GO:0032993, RefSeq:WP_000064078.1, SO:0001217, UniParc:UPI00000D76FC, UniRef:UniRef100_Q2FY79, UniRef:UniRef50_P35163, UniRef:UniRef90_Q2FY79 contig_1 cds 1615728 1616465 - GCA000560365_01547 rsuA Pseudouridine synthase COG:COG1187, COG:J, RefSeq:WP_000159577.1, SO:0001217, UniParc:UPI000005430C, UniRef:UniRef100_Q2FY78, UniRef:UniRef50_A0A090YKY4, UniRef:UniRef90_A0A7U7IEK5 contig_1 cds 1616458 1617000 - GCA000560365_01548 scpB SMC-Scp complex subunit ScpB COG:COG1386, COG:K, GO:0005515, GO:0005737, GO:0006260, GO:0007059, GO:0051301, GO:0051304, KEGG:K06024, RefSeq:WP_000368653.1, SO:0001217, UniParc:UPI00004B5C00, UniRef:UniRef100_Q2FY77, UniRef:UniRef50_Q2FY77, UniRef:UniRef90_Q2FY77 contig_1 cds 1616993 1617748 - GCA000560365_01549 scpA Segregation and condensation protein A COG:COG1354, COG:L, GO:0005737, GO:0006260, GO:0007059, GO:0051301, KEGG:K05896, SO:0001217, UniParc:UPI00000D768E, UniRef:UniRef100_Q2FY76, UniRef:UniRef50_Q6GGK3, UniRef:UniRef90_Q6GGK3 contig_1 cds 1617816 1618322 + GCA000560365_01550 ypuF Cytosolic protein COG:COG1547, COG:S, KEGG:K09763, RefSeq:WP_001183429.1, SO:0001217, UniParc:UPI0000054309, UniRef:UniRef100_Q2FY75, UniRef:UniRef50_Q2FY75, UniRef:UniRef90_Q2FY75 contig_1 cds 1618400 1619287 - GCA000560365_01551 xerD site-specific tyrosine recombinase XerD COG:COG4974, COG:L, GO:0003677, GO:0005737, GO:0006310, GO:0006313, GO:0007059, GO:0009009, GO:0009037, GO:0051301, RefSeq:WP_000447733.1, SO:0001217, UniParc:UPI00000D7702, UniRef:UniRef100_Q5HFS5, UniRef:UniRef50_Q5HFS5, UniRef:UniRef90_Q5HFS5 contig_1 cds 1619336 1619785 - GCA000560365_01552 fur Transcriptional regulator, Fur, putative COG:COG0735, COG:P, RefSeq:WP_000392691.1, SO:0001217, UniParc:UPI00000D782F, UniRef:UniRef100_Q2FY73, UniRef:UniRef50_Q2FY73, UniRef:UniRef90_Q2FY73 contig_1 cds 1619890 1620432 - GCA000560365_01553 mutT GDP-mannose pyrophosphatase COG:COG0494, COG:V, RefSeq:WP_000365246.1, SO:0001217, UniParc:UPI00000D9E3F, UniRef:UniRef100_Q2FY72, UniRef:UniRef50_A0A8I0L781, UniRef:UniRef90_A0A8I0L781 contig_1 cds 1620514 1621422 + GCA000560365_01554 pdxI NADPH-dependent aldo-keto reductase COG:COG0667, COG:HR, RefSeq:WP_001171351.1, SO:0001217, UniParc:UPI0000054305, UniRef:UniRef100_Q2FY71, UniRef:UniRef50_A0A380G9Q4, UniRef:UniRef90_A0A7U7JUR9 contig_1 cds 1621638 1621886 - GCA000560365_01555 Phage protein RefSeq:WP_000995800.1, SO:0001217, UniParc:UPI00000CAAC1, UniRef:UniRef100_Q2FY70, UniRef:UniRef50_A0A2K4AGQ5, UniRef:UniRef90_Q2FY70 contig_1 cds 1621902 1622657 - GCA000560365_01556 yqjQ SDR family oxidoreductase COG:COG0300, COG:R, RefSeq:WP_000678232.1, SO:0001217, UniParc:UPI00000CA987, UniRef:UniRef100_Q2FY69, UniRef:UniRef50_Q2FY69, UniRef:UniRef90_Q2FY69 contig_1 cds 1622799 1623614 + GCA000560365_01557 proC pyrroline-5-carboxylate reductase COG:COG0345, COG:E, EC:1.5.1.2, GO:0004735, GO:0005737, GO:0006561, GO:0055129, RefSeq:WP_000779748.1, SO:0001217, UniParc:UPI00003B16E7, UniRef:UniRef100_Q5HFR9, UniRef:UniRef50_Q49XV0, UniRef:UniRef90_Q99TZ0 contig_1 cds 1623719 1624639 - GCA000560365_01558 rnz ribonuclease Z COG:COG1234, COG:J, EC:3.1.26.11, GO:0008270, GO:0016891, GO:0042780, GO:0042781, RefSeq:WP_000454064.1, SO:0001217, UniParc:UPI0000054300, UniRef:UniRef100_Q2FY67, UniRef:UniRef50_Q2FY67, UniRef:UniRef90_Q2FY67 contig_1 cds 1624952 1626436 + GCA000560365_01559 zwf glucose-6-phosphate dehydrogenase COG:COG0364, COG:G, EC:1.1.1.49, GO:0004345, GO:0006006, GO:0006098, GO:0016614, GO:0050661, RefSeq:WP_000105070.1, SO:0001217, UniParc:UPI00000D771A, UniRef:UniRef100_Q2FY66, UniRef:UniRef50_Q5HP46, UniRef:UniRef90_Q5HP46 contig_1 cds 1626666 1627532 + GCA000560365_01560 araC HTH araC/xylS-type domain-containing protein COG:COG2207, COG:K, RefSeq:WP_000382585.1, SO:0001217, UniParc:UPI00000CAA4E, UniRef:UniRef100_A0A7Z7QZU6, UniRef:UniRef50_Q2FY65, UniRef:UniRef90_Q2FY65 contig_1 cds 1627615 1629264 - GCA000560365_01561 amyA Alpha-amylase COG:COG0366, COG:G, RefSeq:WP_001041911.1, SO:0001217, UniParc:UPI00000542FC, UniRef:UniRef100_Q2FY64, UniRef:UniRef50_O05242, UniRef:UniRef90_A0A7Z7QZR5 contig_1 cds 1629280 1630299 - GCA000560365_01562 purR Transcriptional regulator, putative COG:COG1609, COG:K, RefSeq:WP_000256338.1, SO:0001217, UniParc:UPI00000542FB, UniRef:UniRef100_Q2FY63, UniRef:UniRef50_Q2FY63, UniRef:UniRef90_Q2FY63 contig_1 cds 1630493 1630864 - GCA000560365_01563 gloA Glyoxalase COG:COG0346, COG:Q, RefSeq:WP_000413437.1, SO:0001217, UniParc:UPI00000542FA, UniRef:UniRef100_Q2FY61, UniRef:UniRef50_A0A090M013, UniRef:UniRef90_A0A090M013 contig_1 cds 1631083 1632489 - GCA000560365_01564 gndA NADP-dependent phosphogluconate dehydrogenase COG:COG0362, COG:G, EC:1.1.1.44, GO:0004616, GO:0006098, GO:0016054, GO:0019521, GO:0050661, KEGG:K00033, RefSeq:WP_000193707.1, SO:0001217, UniParc:UPI00000542F9, UniRef:UniRef100_Q5HFR2, UniRef:UniRef50_P00350, UniRef:UniRef90_Q931R3 contig_1 cds 1632557 1633690 - GCA000560365_01565 pepD2 M20/M25/M40 family metallo-hydrolase COG:COG2195, COG:E, EC:3.4.11.4, KEGG:K01258, RefSeq:WP_000606676.1, SO:0001217, UniParc:UPI00004B5C01, UniRef:UniRef100_A0A0D6HL17, UniRef:UniRef50_A0A380G6E1, UniRef:UniRef90_A0A0D6HL17 contig_1 cds 1634040 1634132 + GCA000560365_01566 prli42 stressosome-associated protein Prli42 RefSeq:WP_001180311.1, SO:0001217, UniParc:UPI0001573141, UniRef:UniRef100_Q2FY58, UniRef:UniRef50_Q2FY58, UniRef:UniRef90_Q2FY58 contig_1 cds 1634259 1635239 - GCA000560365_01567 ygaE Putative membrane protein COG:COG4129, COG:S, RefSeq:WP_000916195.1, SO:0001217, UniParc:UPI00000542F4, UniRef:UniRef100_X5EEY9, UniRef:UniRef50_Q49XV8, UniRef:UniRef90_A0A7U7JUT7 contig_1 cds 1635253 1635690 - GCA000560365_01568 Bacilliredoxin SAR1592 GO:0045454, KEGG:K26958, RefSeq:WP_000367419.1, SO:0001217, UniParc:UPI00000D76F9, UniRef:UniRef100_Q2FY55, UniRef:UniRef50_Q2FY55, UniRef:UniRef90_Q2FY55 contig_1 cds 1636041 1637315 - GCA000560365_01569 aceF Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex COG:C, COG:COG0508, RefSeq:WP_000406842.1, SO:0001217, UniParc:UPI0000696C50, UniRef:UniRef100_A0A5A8VMR8, UniRef:UniRef50_P37942, UniRef:UniRef90_A0A0U1MLL2 contig_1 cds 1637328 1638311 - GCA000560365_01570 acoB Pyruvate dehydrogenase E1 component subunit beta COG:C, COG:COG0022, RefSeq:WP_001096642.1, SO:0001217, UniParc:UPI00000542F1, UniRef:UniRef100_Q2FY53, UniRef:UniRef50_P37941, UniRef:UniRef90_Q2FY53 contig_1 cds 1638311 1639303 - GCA000560365_01571 acoA 2-oxoisovalerate dehydrogenase subunit alpha COG:C, COG:COG1071, RefSeq:WP_000568353.1, SO:0001217, UniParc:UPI00000542F0, UniRef:UniRef100_Q2FY52, UniRef:UniRef50_A0A085UCJ1, UniRef:UniRef90_A0A2Y2J981 contig_1 cds 1639319 1640740 - GCA000560365_01572 lpdA dihydrolipoyl dehydrogenase COG:C, COG:COG1249, EC:1.8.1.4, GO:0004148, GO:0050660, KEGG:K00382, RefSeq:WP_001291535.1, SO:0001217, UniParc:UPI00000542EF, UniRef:UniRef100_Q2FY51, UniRef:UniRef50_A0A0U1MLM9, UniRef:UniRef90_A0A0U1MLM9 contig_1 cds 1640891 1642570 - GCA000560365_01573 recN DNA repair protein RecN COG:COG0497, COG:L, GO:0005524, GO:0006281, GO:0006310, RefSeq:WP_000942211.1, SO:0001217, UniParc:UPI00000D9E4A, UniRef:UniRef100_A0A0D3Q7N8, UniRef:UniRef50_B9E6Q3, UniRef:UniRef90_A0A0D3Q7N8 contig_1 cds 1642586 1643038 - GCA000560365_01574 ahrC transcriptional regulator AhrC/ArgR COG:COG1438, COG:K, GO:0003677, GO:0003700, GO:0005737, GO:0006355, GO:0006526, GO:0034618, GO:0051259, GO:1900079, KEGG:K03402, RefSeq:WP_001124985.1, SO:0001217, UniParc:UPI00000D783E, UniRef:UniRef100_Q2FY49, UniRef:UniRef50_P17893, UniRef:UniRef90_Q2FY49 contig_1 cds 1643470 1644351 - GCA000560365_01575 ispA Geranyltranstransferase, putative COG:COG0142, COG:H, RefSeq:WP_000183378.1, SO:0001217, UniParc:UPI00000542EB, UniRef:UniRef100_Q2FY48, UniRef:UniRef50_A0A4U9TB05, UniRef:UniRef90_Q2FY48 contig_1 cds 1644329 1644559 - GCA000560365_01576 xseB exodeoxyribonuclease VII small subunit COG:COG1722, COG:L, EC:3.1.11.6, GO:0005829, GO:0006308, GO:0008855, GO:0009318, RefSeq:WP_000159865.1, SO:0001217, UniParc:UPI00000542EA, UniRef:UniRef100_Q2FY47, UniRef:UniRef50_Q2FY47, UniRef:UniRef90_Q2FY47 contig_1 cds 1644552 1645889 - GCA000560365_01577 xseA exodeoxyribonuclease VII large subunit COG:COG1570, COG:L, EC:3.1.11.6, GO:0003676, GO:0005737, GO:0006308, GO:0008855, GO:0009318, KEGG:K03601, RefSeq:WP_001286928.1, SO:0001217, UniParc:UPI00000542E9, UniRef:UniRef100_Q2FY46, UniRef:UniRef50_Q2FY46, UniRef:UniRef90_Q2FY46 contig_1 cds 1645906 1646295 - GCA000560365_01578 nusB transcription antitermination factor NusB COG:COG0781, COG:K, GO:0003723, GO:0005829, GO:0006353, GO:0031564, KEGG:K03625, RefSeq:WP_000087388.1, SO:0001217, UniParc:UPI0000696C51, UniRef:UniRef100_Q2FGK9, UniRef:UniRef50_Q2FY45, UniRef:UniRef90_Q2FY45 contig_1 cds 1646355 1646717 - GCA000560365_01579 yloU putative conserved protein YloU, alkaline shock protein (Asp23) family COG:COG1302, COG:S, RefSeq:WP_000241588.1, SO:0001217, UniParc:UPI00000542E7, UniRef:UniRef100_Q2FY44, UniRef:UniRef50_A0A853V4U3, UniRef:UniRef90_Q2FY44 contig_1 cds 1646732 1648087 - GCA000560365_01580 accC acetyl-CoA carboxylase biotin carboxylase subunit COG:COG4770, COG:I, EC:6.3.4.14, GO:0004075, GO:0009317, GO:0016874, RefSeq:WP_000756612.1, SO:0001217, UniParc:UPI00000542E6, UniRef:UniRef100_Q2FY43, UniRef:UniRef50_A0A0U1E6Z3, UniRef:UniRef90_A0A0Y9APZ0 contig_1 cds 1648087 1648551 - GCA000560365_01581 accB acetyl-CoA carboxylase biotin carboxyl carrier protein COG:COG0511, COG:I, EC:6.4.1.2, GO:0003989, GO:0006633, GO:0009317, RefSeq:WP_001009516.1, SO:0001217, UniParc:UPI00000542E5, UniRef:UniRef100_Q2FY42, UniRef:UniRef50_A0A090LU16, UniRef:UniRef90_A0A090LU16 contig_1 cds 1649025 1649582 - GCA000560365_01582 efp elongation factor P COG:COG0231, COG:J, GO:0003746, GO:0005737, GO:0006414, GO:0043043, KEGG:K02356, RefSeq:WP_000626504.1, SO:0001217, UniParc:UPI00000542E4, UniRef:UniRef100_Q2FY41, UniRef:UniRef50_Q2FY41, UniRef:UniRef90_Q2FY41 contig_1 cds 1649608 1650669 - GCA000560365_01583 pepP Aminopeptidase P family protein COG:COG0006, COG:E, EC:3.4.11.9, KEGG:K01262, RefSeq:WP_000087107.1, SO:0001217, UniParc:UPI00004B5C0D, UniRef:UniRef100_Q2FY40, UniRef:UniRef50_A0A0D6XTL2, UniRef:UniRef90_A0A2K4AGC7 contig_1 cds 1650774 1651355 + GCA000560365_01584 Lipoprotein RefSeq:WP_000737686.1, SO:0001217, UniParc:UPI00000542E2, UniRef:UniRef100_Q2FY39, UniRef:UniRef50_A0A1J3ZXK3, UniRef:UniRef90_Q2FY39 contig_1 cds 1651369 1651587 + GCA000560365_01585 hypothetical protein RefSeq:WP_001244298.1, SO:0001217, UniParc:UPI00000CAA2A, UniRef:UniRef100_Q2FY38, UniRef:UniRef50_Q2FY38, UniRef:UniRef90_Q2FY38 contig_1 cds 1651651 1652481 - GCA000560365_01586 lipM Octanoyltransferase LipM COG:COG0095, COG:H, EC:2.3.1.181, GO:0009107, GO:0033819, RefSeq:WP_000141108.1, SO:0001217, UniParc:UPI0000696C58, UniRef:UniRef100_A0A0E8GJ70, UniRef:UniRef50_P54511, UniRef:UniRef90_Q2FY37 contig_1 cds 1652639 1653025 + GCA000560365_01587 pspE Rhodanese domain-containing protein COG:COG0607, COG:P, RefSeq:WP_001276571.1, SO:0001217, UniParc:UPI00000542DF, UniRef:UniRef100_Q2FY36, UniRef:UniRef50_Q2FY36, UniRef:UniRef90_Q2FY36 contig_1 cds 1653390 1654862 - GCA000560365_01588 gcvPB aminomethyl-transferring glycine dehydrogenase subunit GcvPB COG:COG1003, COG:E, EC:1.4.4.2, GO:0004375, GO:0005829, GO:0005960, GO:0006546, GO:0016594, GO:0019464, GO:0030170, RefSeq:WP_000202189.1, SO:0001217, UniParc:UPI00000542DE, UniRef:UniRef100_Q2FY35, UniRef:UniRef50_P54377, UniRef:UniRef90_Q2FY35 contig_1 cds 1654855 1656201 - GCA000560365_01589 gcvPA aminomethyl-transferring glycine dehydrogenase subunit GcvPA COG:COG0403, COG:E, EC:1.4.4.2, GO:0004375, GO:0006546, GO:0009116, GO:0019464, RefSeq:WP_000019687.1, SO:0001217, UniParc:UPI00000D9E51, UniRef:UniRef100_Q2FY34, UniRef:UniRef50_Q81M07, UniRef:UniRef90_Q2FY34 contig_1 cds 1656221 1657312 - GCA000560365_01590 gcvT glycine cleavage system aminomethyltransferase GcvT COG:COG0404, COG:E, EC:2.1.2.10, GO:0004047, GO:0005737, GO:0005829, GO:0005960, GO:0008483, GO:0019464, RefSeq:WP_000093349.1, SO:0001217, UniParc:UPI00000542DC, UniRef:UniRef100_Q2FY33, UniRef:UniRef50_Q2FY33, UniRef:UniRef90_Q2FY33 contig_1 ncRNA-region 1657387 1657484 - Glycine riboswitch aptamer RFAM:RF00504, SO:0000035 contig_1 cds 1657471 1657995 - GCA000560365_01591 aroK Shikimate kinase COG:COG0703, COG:E, EC:2.7.1.71, GO:0000287, GO:0004765, GO:0005524, GO:0005829, GO:0008652, GO:0009073, GO:0009423, RefSeq:WP_001015117.1, SO:0001217, UniParc:UPI00000542DB, UniRef:UniRef100_Q2FY32, UniRef:UniRef50_Q2FY32, UniRef:UniRef90_Q2FY32 contig_1 cds 1658228 1658602 - GCA000560365_01592 Competence ComGF-like protein SO:0001217, UniParc:UPI000069AACC, UniRef:UniRef100_Q2G2I9, UniRef:UniRef50_A0A2X4YB59, UniRef:UniRef90_Q2G2I9 contig_1 cds 1658643 1658942 - GCA000560365_01593 Competence protein ComGE RefSeq:WP_000844413.1, SO:0001217, UniParc:UPI00000542D8, UniRef:UniRef100_Q2G2I8, UniRef:UniRef50_A0A2K4AGD7, UniRef:UniRef90_Q2G2I8 contig_1 cds 1658929 1659363 - GCA000560365_01594 comGD competence type IV pilus minor pilin ComGD COG:COG2165, COG:NU, SO:0001217, UniParc:UPI000169833D, UniRef:UniRef100_A0A1S6CR26, UniRef:UniRef50_Q2G2I7, UniRef:UniRef90_Q2G2I7 contig_1 cds 1659353 1659664 - GCA000560365_01595 comGC competence type IV pilus major pilin ComGC COG:COG4537, COG:X, GO:0030420, RefSeq:WP_000472256.1, SO:0001217, UniParc:UPI00000542D4, UniRef:UniRef100_Q2G2J0, UniRef:UniRef50_A0A380G8S0, UniRef:UniRef90_A0A0U1MLR1 contig_1 cds 1659678 1660748 - GCA000560365_01596 comGB competence type IV pilus assembly protein ComGB COG:COG1459, COG:NU, RefSeq:WP_000775708.1, SO:0001217, UniParc:UPI00004B5C10, UniRef:UniRef100_Q2G2I6, UniRef:UniRef50_Q2G2I6, UniRef:UniRef90_Q2G2I6 contig_1 cds 1660720 1661694 - GCA000560365_01597 comGA competence type IV pilus ATPase ComGA COG:COG2804, COG:NU, RefSeq:WP_000697228.1, SO:0001217, UniParc:UPI00004B5C11, UniRef:UniRef100_Q2FY30, UniRef:UniRef50_Q2FY30, UniRef:UniRef90_Q2FY30 contig_1 cds 1661746 1662369 - GCA000560365_01598 gloB Metallo-beta-lactamase domain-containing protein COG:COG0491, COG:R, RefSeq:WP_001223008.1, SO:0001217, UniParc:UPI00000542D1, UniRef:UniRef100_Q2FY29, UniRef:UniRef50_Q2FY29, UniRef:UniRef90_Q2FY29 contig_1 cds 1662366 1662695 - GCA000560365_01599 yqgV Thiamine-binding protein domain-containing protein COG:COG0011, COG:H, RefSeq:WP_001018871.1, SO:0001217, UniParc:UPI00000542D0, UniRef:UniRef100_Q2FY28, UniRef:UniRef50_Q56200, UniRef:UniRef90_A0A7U7JUV1 contig_1 cds 1662695 1663681 - GCA000560365_01600 nagC Glucokinase COG:COG1940, COG:GK, RefSeq:WP_000161314.1, SO:0001217, UniParc:UPI00000542CF, UniRef:UniRef100_Q2FY27, UniRef:UniRef50_Q56198, UniRef:UniRef90_A0A7U7JUV0 contig_1 cds 1663862 1665325 - GCA000560365_01601 glpG Membrane peptidase, contains TPR repeat domain COG:COG0705, COG:O, EC:3.4.21.105, KEGG:K19225, RefSeq:WP_031808149.1, SO:0001217, UniParc:UPI00044DED1F, UniRef:UniRef100_UPI00044DED1F, UniRef:UniRef50_A0A4U9T9N5, UniRef:UniRef90_A0A6B5H1W4 contig_1 cds 1665337 1665930 - GCA000560365_01602 fAU1 5-formyltetrahydrofolate cyclo-ligase COG:COG0212, COG:H, EC:6.3.3.2, GO:0006730, GO:0030272, SO:0001217, UniParc:UPI00000542CA, UniRef:UniRef100_A0A0D6HL28, UniRef:UniRef50_Q2FY23, UniRef:UniRef90_Q2FY23 contig_1 cds 1666085 1666234 - GCA000560365_01603 rpmG 50S ribosomal protein L33 COG:COG0267, COG:J, GO:0003735, GO:0005737, GO:0005840, GO:0006412, GO:1990904, KEGG:K02913, RefSeq:WP_001265709.1, SO:0001217, UniParc:UPI00000542C9, UniRef:UniRef100_Q2FY22, UniRef:UniRef50_Q5HNZ8, UniRef:UniRef90_Q5HNZ8 contig_1 cds 1666347 1668422 - GCA000560365_01604 ftsI Putative penicillin-binding protein COG:COG0768, COG:DM, EC:3.4.-.-, KEGG:K12553, RefSeq:WP_000919754.1, SO:0001217, UniParc:UPI0000696C5A, UniRef:UniRef100_A0A5A8VNY1, UniRef:UniRef50_P83331, UniRef:UniRef90_P83331 contig_1 cds 1668543 1669142 - GCA000560365_01605 sodA Superoxide dismutase [Mn/Fe] 1 COG:COG0605, COG:P, EC:1.15.1.1, GO:0004784, GO:0005737, GO:0046872, KEGG:K04564, RefSeq:WP_000863556.1, SO:0001217, UniParc:UPI00000542C7, UniRef:UniRef100_P0A0J3, UniRef:UniRef50_Q9K4V3, UniRef:UniRef90_P0A0J3 contig_1 cds 1669419 1669829 - GCA000560365_01606 fur Ferric uptake regulation protein COG:COG0735, COG:P, GO:0000976, GO:0003700, GO:0005737, GO:0008270, GO:0045892, GO:1900376, KEGG:K02076, RefSeq:WP_001095260.1, SO:0001217, UniParc:UPI00000542C6, UniRef:UniRef100_Q2FY19, UniRef:UniRef50_Q2FY19, UniRef:UniRef90_Q2FY19 contig_1 cds 1669816 1670688 - GCA000560365_01607 znuB Metal ABC transporter permease COG:COG1108, COG:P, SO:0001217, UniParc:UPI00005FE533, UniRef:UniRef100_A0A7Z7W1S3, UniRef:UniRef50_Q2FY18, UniRef:UniRef90_Q2FY18 contig_1 cds 1670721 1671506 - GCA000560365_01608 znuC ABC transporter, putative COG:COG1121, COG:P, RefSeq:WP_001213908.1, SO:0001217, UniParc:UPI00000542C4, UniRef:UniRef100_Q2FY17, UniRef:UniRef50_A0A1W7AC50, UniRef:UniRef90_Q2FY17 contig_1 cds 1671632 1672522 - GCA000560365_01609 nfo deoxyribonuclease IV COG:COG0648, COG:L, EC:3.1.21.2, GO:0003677, GO:0003906, GO:0006281, GO:0006284, GO:0008081, GO:0008270, GO:0008833, RefSeq:WP_000924214.1, SO:0001217, UniParc:UPI00004B5C13, UniRef:UniRef100_Q2FY16, UniRef:UniRef50_Q2FY16, UniRef:UniRef90_Q2FY16 contig_1 cds 1672532 1673878 - GCA000560365_01610 cshB DEAD-box ATP-dependent RNA helicase CshB COG:COG0513, COG:L, EC:3.6.4.13, GO:0003689, GO:0003724, GO:0005524, GO:0005829, GO:0006401, GO:0009409, GO:0016887, GO:0033592, GO:0061775, GO:0140584, GO:0140665, GO:0140849, RefSeq:WP_001062180.1, SO:0001217, UniParc:UPI00000542C2, UniRef:UniRef100_Q2FY15, UniRef:UniRef50_Q2FY15, UniRef:UniRef90_Q2FY15 contig_1 cds 1673992 1675092 - GCA000560365_01611 nIF3 Nif3-like dinuclear metal center hexameric protein COG:COG0327, COG:H, EC:3.5.4.16, GO:0005737, GO:0046872, GO:0051540, KEGG:K22391, RefSeq:WP_000683931.1, SO:0001217, UniParc:UPI00000542C1, UniRef:UniRef100_Q5HFK1, UniRef:UniRef50_P67272, UniRef:UniRef90_P67272 contig_1 cds 1675095 1675772 - GCA000560365_01612 trmK tRNA-m1A22 methylase COG:COG2384, COG:J, EC:2.1.1.217, KEGG:K06967, RefSeq:WP_000624584.1, SO:0001217, UniParc:UPI00000542C0, UniRef:UniRef100_Q2FY13, UniRef:UniRef50_A0A239Z5U5, UniRef:UniRef90_A0A2X2M890 contig_1 cds 1675903 1677009 - GCA000560365_01613 rpoD RNA polymerase sigma factor RpoD COG:COG0568, COG:K, GO:0003677, GO:0005737, GO:0006352, GO:0006355, GO:0016987, KEGG:K03086, RefSeq:WP_001283055.1, SO:0001217, UniParc:UPI00000542BF, UniRef:UniRef100_P0A0J0, UniRef:UniRef50_P0A0J0, UniRef:UniRef90_P0A0J0 contig_1 cds 1677233 1679032 - GCA000560365_01614 dnaG DNA primase COG:COG0358, COG:L, EC:2.7.7.101, GO:0000428, GO:0003677, GO:0003678, GO:0003896, GO:0005524, GO:0005737, GO:0008270, GO:1990077, KEGG:K02316, RefSeq:WP_001217261.1, SO:0001217, UniParc:UPI000011DD9D, UniRef:UniRef100_Q5HFJ8, UniRef:UniRef50_O05338, UniRef:UniRef90_O05338 contig_1 cds 1679093 1679911 - GCA000560365_01615 ppsR Putative pyruvate, phosphate dikinase regulatory protein COG:COG1806, COG:T, EC:2.7.11.32, EC:2.7.4.27, GO:0004674, GO:0005524, GO:0016776, GO:0043531, RefSeq:WP_000411299.1, SO:0001217, UniParc:UPI00000542BE, UniRef:UniRef100_Q2FY10, UniRef:UniRef50_Q2FY10, UniRef:UniRef90_Q2FY10 contig_1 cds 1679922 1680461 - GCA000560365_01616 glpR CBS domain-containing protein COG:COG1349, COG:KG, RefSeq:WP_001054797.1, SO:0001217, UniParc:UPI00004B5C15, UniRef:UniRef100_Q2FY09, UniRef:UniRef50_O34994, UniRef:UniRef90_A0A7U7JV00 contig_1 cds 1680880 1682271 + GCA000560365_01617 glyQS glycine--tRNA ligase COG:COG0423, COG:J, EC:6.1.1.14, GO:0000166, GO:0004820, GO:0005524, GO:0005737, GO:0006426, GO:0016740, GO:0046983, KEGG:K01880, RefSeq:WP_001030080.1, SO:0001217, UniParc:UPI000002E8EC, UniRef:UniRef100_Q2FY08, UniRef:UniRef50_Q2FY08, UniRef:UniRef90_Q2FY08 contig_1 cds 1682421 1683167 - GCA000560365_01618 recO DNA repair protein RecO COG:COG1381, COG:L, GO:0003677, GO:0006281, GO:0006302, GO:0006310, GO:0043590, RefSeq:WP_001548963.1, SO:0001217, UniParc:UPI000069AACF, UniRef:UniRef100_Q2FGF7, UniRef:UniRef50_Q49Y09, UniRef:UniRef90_Q2FGF7 contig_1 cds 1683195 1684094 - GCA000560365_01619 era GTPase Era COG:COG1159, COG:J, GO:0000028, GO:0003723, GO:0003924, GO:0005525, GO:0005829, GO:0005886, GO:0043024, GO:0070181, RefSeq:WP_000134765.1, SO:0001217, UniParc:UPI000012A100, UniRef:UniRef100_Q2FGF6, UniRef:UniRef50_P42182, UniRef:UniRef90_Q2FY06 contig_1 cds 1684095 1684499 - GCA000560365_01620 cdd cytidine deaminase COG:COG0295, COG:F, EC:3.5.4.5, GO:0004126, GO:0005737, GO:0008270, GO:0008655, GO:0009972, KEGG:K01489, RefSeq:WP_000121875.1, SO:0001217, UniParc:UPI00000542B8, UniRef:UniRef100_Q2FY04, UniRef:UniRef50_A0A1W7AC49, UniRef:UniRef90_A0A2K4AGX2 contig_1 cds 1684510 1684854 - GCA000560365_01621 ybeY rRNA maturation RNase YbeY COG:COG0818, COG:I, GO:0004540, GO:0042254, GO:0046872, RefSeq:WP_000819532.1, SO:0001217, UniParc:UPI00000542B7, UniRef:UniRef100_Q2FY03, UniRef:UniRef50_Q2FY03, UniRef:UniRef90_Q2FY03 contig_1 cds 1684857 1685324 - GCA000560365_01622 ybeY rRNA maturation RNase YbeY COG:COG0319, COG:J, EC:3.1.-.-, GO:0004222, GO:0004521, GO:0004540, GO:0005737, GO:0006364, GO:0008270, GO:0042254, GO:0046872, RefSeq:WP_000494134.1, SO:0001217, UniParc:UPI000013AD70, UniRef:UniRef100_Q2FY02, UniRef:UniRef50_Q2FY02, UniRef:UniRef90_Q2FY02 contig_1 cds 1685325 1686272 - GCA000560365_01623 phoH PhoH-like protein COG:COG1702, COG:T, KEGG:K06217, RefSeq:WP_001117767.1, SO:0001217, UniParc:UPI00000D7657, UniRef:UniRef100_Q2FY01, UniRef:UniRef50_A0A174T1P7, UniRef:UniRef90_A0A115CVC0 contig_1 cds 1686576 1687274 - GCA000560365_01624 Iron transporter RefSeq:WP_000110603.1, SO:0001217, UniParc:UPI00000542B4, UniRef:UniRef100_Q2FY00, UniRef:UniRef50_Q2FY00, UniRef:UniRef90_Q2FY00 contig_1 cds 1687291 1688280 - GCA000560365_01625 floA flotillin-like protein FloA COG:COG4864, COG:M, GO:0005886, GO:0045121, RefSeq:WP_000492114.1, SO:0001217, UniParc:UPI00000542B3, UniRef:UniRef100_Q2FXZ9, UniRef:UniRef50_P54466, UniRef:UniRef90_Q49Y16 contig_1 cds 1688298 1689005 - GCA000560365_01626 nfeD NfeD-like C-terminal domain-containing protein COG:COG1030, COG:O, SO:0001217, UniParc:UPI00000D76DF, UniRef:UniRef100_W8U5J3, UniRef:UniRef50_Q2FXZ8, UniRef:UniRef90_Q2FXZ8 contig_1 cds 1689225 1689401 - GCA000560365_01627 rpsU 30S ribosomal protein S21 COG:COG0828, COG:J, GO:0003735, GO:0005840, GO:0006412, GO:1990904, RefSeq:WP_000048060.1, SO:0001217, UniParc:UPI000004802C, UniRef:UniRef100_Q2FXZ7, UniRef:UniRef50_Q5M3E1, UniRef:UniRef90_Q2FXZ7 contig_1 cds 1689694 1691040 - GCA000560365_01628 mtaB tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB COG:COG0621, COG:J, EC:2.8.4.5, GO:0006400, GO:0051539, GO:0061712, GO:1904047, KEGG:K18707, RefSeq:WP_000108667.1, SO:0001217, UniParc:UPI00000542B0, UniRef:UniRef100_Q2FXZ6, UniRef:UniRef50_P54462, UniRef:UniRef90_A0A077URN1 contig_1 cds 1691047 1691799 - GCA000560365_01629 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase COG:COG1385, COG:J, EC:2.1.1.193, GO:0006364, GO:0008168, KEGG:K09761, RefSeq:WP_001190128.1, SO:0001217, UniParc:UPI00004B5C18, UniRef:UniRef100_Q2FXZ5, UniRef:UniRef50_A0A122ER25, UniRef:UniRef90_A0A122ER25 contig_1 cds 1691801 1692739 - GCA000560365_01630 prmA 50S ribosomal protein L11 methyltransferase COG:COG2264, COG:J, EC:2.1.1.-, GO:0005737, GO:0008757, GO:0032259, GO:0036211, GO:0042054, RefSeq:WP_001104611.1, SO:0001217, UniParc:UPI00000542AD, UniRef:UniRef100_Q2FXZ4, UniRef:UniRef50_Q2FXZ4, UniRef:UniRef90_Q2FXZ4 contig_1 cds 1692743 1693882 - GCA000560365_01631 dnaJ molecular chaperone DnaJ COG:COG0484, COG:O, GO:0005524, GO:0005737, GO:0006260, GO:0006457, GO:0008270, GO:0009408, GO:0031072, GO:0042026, GO:0051082, GO:0051085, RefSeq:WP_001119021.1, SO:0001217, UniParc:UPI00000D7685, UniRef:UniRef100_Q2FXZ3, UniRef:UniRef50_P95830, UniRef:UniRef90_Q2FXZ3 contig_1 cds 1694018 1695850 - GCA000560365_01632 dnaK molecular chaperone DnaK COG:COG0443, COG:O, GO:0005524, GO:0006457, GO:0016887, GO:0051082, GO:0140662, RefSeq:WP_000034716.1, SO:0001217, UniParc:UPI0000129601, UniRef:UniRef100_Q2FXZ2, UniRef:UniRef50_P17820, UniRef:UniRef90_Q2FXZ2 contig_1 cds 1695919 1696545 - GCA000560365_01633 grpE nucleotide exchange factor GrpE COG:COG0576, COG:O, GO:0000774, GO:0005737, GO:0006457, GO:0042803, GO:0051082, GO:0051087, RefSeq:WP_000182215.1, SO:0001217, UniParc:UPI00000542AA, UniRef:UniRef100_Q2FXZ1, UniRef:UniRef50_Q2FXZ1, UniRef:UniRef90_Q2FXZ1 contig_1 cds 1696577 1697554 - GCA000560365_01634 hrcA heat-inducible transcriptional repressor HrcA COG:COG1420, COG:K, GO:0003677, GO:0006355, GO:0045892, KEGG:K03705, RefSeq:WP_000627140.1, SO:0001217, UniParc:UPI00000542A9, UniRef:UniRef100_Q2FXZ0, UniRef:UniRef50_P68792, UniRef:UniRef90_P68792 contig_1 cds 1697654 1698811 - GCA000560365_01635 hemW radical SAM family heme chaperone HemW COG:COG0635, COG:H, GO:0005737, GO:0006779, GO:0051539, GO:0051989, SO:0001217, UniRef:UniRef50_A0A0D6HI97, UniRef:UniRef90_A0A0D6HI97 contig_1 ncRNA 1699030 1699275 + GCA000560365_01636 S35 Staphylococcus sRNA 35 (srn_0335) RFAM:RF02894, SO:0000655 contig_1 cds 1699341 1701164 - GCA000560365_01637 lepA translation elongation factor 4 COG:COG0481, COG:J, EC:3.6.5.n1, GO:0003746, GO:0003924, GO:0005525, GO:0005886, GO:0043022, GO:0045727, GO:1990606, RefSeq:WP_000368341.1, SO:0001217, UniParc:UPI00000542A7, UniRef:UniRef100_Q2FXY7, UniRef:UniRef50_Q2FXY7, UniRef:UniRef90_Q2FXY7 contig_1 cds 1701510 1701761 + GCA000560365_01638 rpsT 30S ribosomal protein S20 COG:COG0268, COG:J, GO:0003723, GO:0003735, GO:0005829, GO:0005840, GO:0006412, GO:0015935, GO:0070181, KEGG:K02968, RefSeq:WP_001274017.1, SO:0001217, UniParc:UPI0000048018, UniRef:UniRef100_Q2FXY6, UniRef:UniRef50_Q5HNW1, UniRef:UniRef90_Q2FXY6 contig_1 cds 1701806 1702780 - GCA000560365_01639 holA DNA polymerase III subunit delta COG:COG1466, COG:L, EC:2.7.7.7, GO:0003677, GO:0003887, GO:0006260, RefSeq:WP_001282562.1, SO:0001217, UniParc:UPI00000542A5, UniRef:UniRef100_Q2FXY5, UniRef:UniRef50_K9AV25, UniRef:UniRef90_A0A3A5LSD9 contig_1 cds 1702837 1705038 - GCA000560365_01640 comEC DNA internalization-related competence protein ComEC/Rec2 COG:COG2333, COG:U, GO:0005215, GO:0009290, GO:0016020, KEGG:K02238, RefSeq:WP_001548978.1, SO:0001217, UniParc:UPI0000696C5D, UniRef:UniRef100_A0AAN2Q3C1, UniRef:UniRef50_A0A6K1MRM3, UniRef:UniRef90_A0A6K1MRM3 contig_1 cds 1705043 1705474 - GCA000560365_01641 comEB ComE operon protein 2 COG:COG2131, COG:FJ, RefSeq:WP_001548979.1, SO:0001217, UniParc:UPI00004B5C1B, UniRef:UniRef100_Q2G2A1, UniRef:UniRef50_A0A1E7X972, UniRef:UniRef90_A0A380G1G9 contig_1 cds 1705596 1706273 - GCA000560365_01642 comEA ComE operon protein 1 COG:COG1555, COG:L, SO:0001217, UniParc:UPI0001574486, UniRef:UniRef100_A0A0D6HJH2, UniRef:UniRef50_A0A9P2YX25, UniRef:UniRef90_A0A9P2YX25 contig_1 cds 1706322 1707038 - GCA000560365_01643 Methyltransferase COG:COG4976, COG:R, RefSeq:WP_000084829.1, SO:0001217, UniParc:UPI000005429E, UniRef:UniRef100_Q2G2A0, UniRef:UniRef50_A0A2S6DNM9, UniRef:UniRef90_A0A2S6DNM9 contig_1 cds 1707041 1707394 - GCA000560365_01644 rsfS ribosome silencing factor COG:COG0799, COG:J, GO:0017148, GO:0043022, RefSeq:WP_001088022.1, SO:0001217, UniParc:UPI000005429D, UniRef:UniRef100_Q2G298, UniRef:UniRef50_Q2G298, UniRef:UniRef90_Q2G298 contig_1 cds 1707395 1707979 - GCA000560365_01645 nadD nicotinate (nicotinamide) nucleotide adenylyltransferase COG:COG1713, COG:TR, EC:2.7.7.18, EC:3.6.1.41, GO:0000166, GO:0000309, GO:0004515, GO:0005737, GO:0009435, GO:0016787, GO:0046872, RefSeq:WP_001019324.1, SO:0001217, UniParc:UPI00000D767A, UniRef:UniRef100_Q2G297, UniRef:UniRef50_Q2G297, UniRef:UniRef90_Q2G297 contig_1 cds 1707969 1708538 - GCA000560365_01646 nadD nicotinate (nicotinamide) nucleotide adenylyltransferase COG:COG1057, COG:H, EC:2.7.7.18, GO:0000309, GO:0004515, GO:0005524, GO:0005737, GO:0009435, RefSeq:WP_000725162.1, SO:0001217, UniParc:UPI000005429B, UniRef:UniRef100_Q2FXY3, UniRef:UniRef50_Q2FXY3, UniRef:UniRef90_Q2FXY3 contig_1 cds 1708541 1708831 - GCA000560365_01647 yhbY ribosome assembly RNA-binding protein YhbY COG:COG1534, COG:J, GO:0003723, RefSeq:WP_000955231.1, SO:0001217, UniParc:UPI000005429A, UniRef:UniRef100_Q2FXY2, UniRef:UniRef50_C0ZB08, UniRef:UniRef90_Q2FXY2 contig_1 cds 1708835 1709641 - GCA000560365_01648 aroE Shikimate dehydrogenase (NADP(+)) COG:COG0169, COG:E, EC:1.1.1.25, GO:0004764, GO:0005829, GO:0008652, GO:0009073, GO:0009423, GO:0019632, GO:0050661, RefSeq:WP_000666761.1, SO:0001217, UniParc:UPI00004B5C1D, UniRef:UniRef100_Q2FXY1, UniRef:UniRef50_Q5HNV1, UniRef:UniRef90_Q2FXY1 contig_1 cds 1709655 1710755 - GCA000560365_01649 yqeH ribosome biogenesis GTPase YqeH COG:COG1161, COG:J, GO:0003924, GO:0005525, GO:0005737, GO:0042254, RefSeq:WP_001280141.1, SO:0001217, UniParc:UPI00000D9E63, UniRef:UniRef100_Q2FXY0, UniRef:UniRef50_P54453, UniRef:UniRef90_Q2FXY0 contig_1 cds 1710756 1711283 - GCA000560365_01650 yqeG YqeG family HAD IIIA-type phosphatase COG:COG2179, COG:R, RefSeq:WP_000524902.1, SO:0001217, UniParc:UPI0000054297, UniRef:UniRef100_Q2FXX9, UniRef:UniRef50_Q2FXX9, UniRef:UniRef90_Q2FXX9 contig_1 cds 1711303 1711989 - GCA000560365_01651 mtnN 5'-methylthioadenosine/adenosylhomocysteine nucleosidase COG:COG0775, COG:FH, EC:3.2.2.9, GO:0005829, GO:0008782, GO:0008930, GO:0009116, GO:0009164, GO:0019284, GO:0019509, KEGG:K01243, RefSeq:WP_000579275.1, SO:0001217, UniParc:UPI00000D783C, UniRef:UniRef100_Q2FXX8, UniRef:UniRef50_Q4L6V0, UniRef:UniRef90_Q2FXX8 contig_1 cds 1712303 1712572 + GCA000560365_01652 hypothetical protein RefSeq:WP_000829750.1, SO:0001217, UniParc:UPI0000054295, UniRef:UniRef100_Q2FXX6, UniRef:UniRef50_Q2FXX6, UniRef:UniRef90_Q2FXX6 contig_1 cds 1712774 1713526 - GCA000560365_01653 sel26 staphylococcal enterotoxin type 26 KEGG:K11040, NCBIProtein:KAG18833.1, RefSeq:WP_001548981.1, SO:0001217, UniParc:UPI0001BE5BF8, UniRef:UniRef100_A0A0D6HI16, UniRef:UniRef50_A0A0D6HI16, UniRef:UniRef90_A0A0D6HI16 contig_1 cds 1713940 1715160 - GCA000560365_01654 Fido domain-containing protein COG:COG3177, COG:K, RefSeq:WP_000542309.1, SO:0001217, UniParc:UPI0000054293, UniRef:UniRef100_Q2FXX4, UniRef:UniRef50_Q2FXX4, UniRef:UniRef90_Q2FXX4 contig_1 cds 1715449 1716678 - GCA000560365_01655 mntH Divalent metal cation transporter COG:COG1914, COG:P, RefSeq:WP_000533238.1, SO:0001217, UniParc:UPI0000054292, UniRef:UniRef100_Q2FXX3, UniRef:UniRef50_Q5HNU7, UniRef:UniRef90_Q2FXX3 contig_1 cds 1716691 1717443 - GCA000560365_01656 pxpA 5-oxoprolinase subunit PxpA COG:COG1540, COG:E, EC:3.5.2.9, GO:0003824, GO:0005524, GO:0005975, GO:0017168, RefSeq:WP_001261795.1, SO:0001217, UniParc:UPI0000054291, UniRef:UniRef100_Q2FXX2, UniRef:UniRef50_Q57RM2, UniRef:UniRef90_Q2FXX2 contig_1 cds 1717443 1718804 - GCA000560365_01657 accC Acetyl-CoA carboxylase biotin carboxylase subunit COG:COG0439, COG:I, RefSeq:WP_000942744.1, SO:0001217, UniParc:UPI0000054290, UniRef:UniRef100_Q2FXX1, UniRef:UniRef50_A0A2T4PV93, UniRef:UniRef90_A0AAE8P885 contig_1 cds 1718818 1719267 - GCA000560365_01658 accB Acetyl-CoA carboxylase biotin carboxyl carrier protein subunit COG:COG0511, COG:I, RefSeq:WP_001019337.1, SO:0001217, UniParc:UPI000005428F, UniRef:UniRef100_Q2FXX0, UniRef:UniRef50_A0A380FYW2, UniRef:UniRef90_A0A2W2SQL9 contig_1 cds 1719269 1720279 - GCA000560365_01659 pxpC Carboxyltransferase domain-containing protein COG:COG1984, COG:E, RefSeq:WP_000023316.1, SO:0001217, UniParc:UPI000005428E, UniRef:UniRef100_Q2FXW9, UniRef:UniRef50_Q2FXW9, UniRef:UniRef90_Q2FXW9 contig_1 cds 1720269 1721003 - GCA000560365_01660 pxpB 5-oxoprolinase subunit PxpB COG:COG2049, COG:E, EC:3.5.2.9, GO:0005975, GO:0008152, GO:0017168, RefSeq:WP_000383180.1, SO:0001217, UniParc:UPI00000CAD41, UniRef:UniRef100_W8U5F9, UniRef:UniRef50_A0A9X0PF13, UniRef:UniRef90_W8U5F9 contig_1 cds 1721329 1721805 - GCA000560365_01661 greA transcription elongation factor GreA COG:COG0782, COG:K, GO:0003677, GO:0006354, GO:0032784, GO:0070063, RefSeq:WP_000431312.1, SO:0001217, UniParc:UPI000005428C, UniRef:UniRef100_Q2FXW7, UniRef:UniRef50_Q2FXW7, UniRef:UniRef90_Q2FXW7 contig_1 cds 1721833 1722456 - GCA000560365_01662 udk uridine kinase COG:COG0572, COG:F, EC:2.7.1.48, GO:0004849, GO:0005524, GO:0005737, GO:0043771, GO:0044206, GO:0044211, RefSeq:WP_000648617.1, SO:0001217, UniParc:UPI000005428B, UniRef:UniRef100_Q2FXW6, UniRef:UniRef50_Q9KDD8, UniRef:UniRef90_Q2FXW6 contig_1 cds 1722456 1723724 - GCA000560365_01663 rlhA Peptidase family U32 C-terminal domain-containing protein COG:COG0826, COG:J, EC:3.4.-.-, KEGG:K08303, RefSeq:WP_000848304.1, SO:0001217, UniParc:UPI000005428A, UniRef:UniRef100_Q2FXW5, UniRef:UniRef50_O32034, UniRef:UniRef90_Q2FXW5 contig_1 cds 1723736 1724659 - GCA000560365_01664 rlhA Peptidase U32 family protein COG:COG0826, COG:J, RefSeq:WP_000137775.1, SO:0001217, UniParc:UPI00000D9E6B, UniRef:UniRef100_Q2FXW4, UniRef:UniRef50_O32035, UniRef:UniRef90_A0A389PYG2 contig_1 cds 1724662 1725300 - GCA000560365_01665 trmR tRNA 5-hydroxyuridine methyltransferase COG:COG4122, COG:J, RefSeq:WP_000342266.1, SO:0001217, UniParc:UPI0000054288, UniRef:UniRef100_Q2FXW3, UniRef:UniRef50_A0A2A1K8K5, UniRef:UniRef90_A0A6B1RN35 contig_1 cds 1725585 1725893 - GCA000560365_01666 yrzB UPF0473 protein SAOUHSC_01719 COG:COG3906, COG:S, RefSeq:WP_000134779.1, SO:0001217, UniParc:UPI0000054287, UniRef:UniRef100_Q2FXW2, UniRef:UniRef50_Q2FXW2, UniRef:UniRef90_Q2FXW2 contig_1 cds 1725908 1726336 - GCA000560365_01667 ruvX Holliday junction resolvase RuvX COG:COG0816, COG:JLK, EC:3.1.-.-, EC:3.1.21.10, GO:0000967, GO:0004518, GO:0005829, GO:0006364, RefSeq:WP_000939059.1, SO:0001217, UniParc:UPI0000054286, UniRef:UniRef100_Q2FXW1, UniRef:UniRef50_Q2FXW1, UniRef:UniRef90_Q2FXW1 contig_1 cds 1726340 1726600 - GCA000560365_01668 ireB IreB family regulatory phosphoprotein COG:COG4472, COG:S, RefSeq:WP_000426912.1, SO:0001217, UniParc:UPI00000D778B, UniRef:UniRef100_Q2FXW0, UniRef:UniRef50_Q7WY61, UniRef:UniRef90_Q2FXW0 contig_1 cds 1726663 1729296 - GCA000560365_01669 alaS alanine--tRNA ligase COG:COG0013, COG:J, EC:6.1.1.7, GO:0000049, GO:0000166, GO:0002161, GO:0004813, GO:0005524, GO:0005737, GO:0005829, GO:0006419, GO:0008270, GO:0016740, SO:0001217, UniParc:UPI0000052298, UniRef:UniRef100_Q2FXV9, UniRef:UniRef50_Q03ER8, UniRef:UniRef90_Q2FXV9 contig_1 ncRNA-region 1729425 1729602 - T-box leader RFAM:RF00230, SO:0000140 contig_1 cds 1729636 1732113 - GCA000560365_01670 recD ATP-dependent RecD2 DNA helicase COG:COG0507, COG:L, RefSeq:WP_001283311.1, SO:0001217, UniParc:UPI0000054283, UniRef:UniRef100_Q2FXV8, UniRef:UniRef50_A0A654AZ37, UniRef:UniRef90_Q2FXV8 contig_1 cds 1732115 1732783 - GCA000560365_01671 tPR Tetratricopeptide repeat protein COG:COG0457, COG:R, RefSeq:WP_000567028.1, SO:0001217, UniParc:UPI0000054282, UniRef:UniRef100_Q2FXV7, UniRef:UniRef50_A0A2A1KA84, UniRef:UniRef90_A0A7Z1N2M0 contig_1 cds 1733245 1734363 - GCA000560365_01672 mnmA tRNA 2-thiouridine(34) synthase MnmA COG:COG0482, COG:J, EC:2.8.1.13, GO:0000049, GO:0002143, GO:0005524, GO:0005737, GO:0008033, GO:0016740, GO:0016783, GO:0103016, KEGG:K00566, RefSeq:WP_000066097.1, SO:0001217, UniParc:UPI000013748D, UniRef:UniRef100_Q2FXV6, UniRef:UniRef50_Q97T38, UniRef:UniRef90_Q2FXV6 contig_1 cds 1734364 1735506 - GCA000560365_01673 nifS cysteine desulfurase COG:COG1104, COG:E, EC:2.8.1.7, KEGG:K04487, RefSeq:WP_000409167.1, SO:0001217, UniParc:UPI000005427F, UniRef:UniRef100_Q2FXV4, UniRef:UniRef50_A0A391MGC8, UniRef:UniRef90_A0A391MGC8 contig_1 cds 1735818 1736831 + GCA000560365_01674 ssuD LLM class flavin-dependent oxidoreductase COG:COG2141, COG:HR, RefSeq:WP_000985886.1, SO:0001217, UniParc:UPI00004B5C22, UniRef:UniRef100_A0A0D6HHK7, UniRef:UniRef50_A0A0D6HHK7, UniRef:UniRef90_A0A0D6HHK7 contig_1 cds 1737068 1737214 - GCA000560365_01675 SAS049 family protein RefSeq:WP_000009238.1, SO:0001217, UniParc:UPI000005427D, UniRef:UniRef100_Q2FXV2, UniRef:UniRef50_A0A7Z0RRV6, UniRef:UniRef90_Q2FXV2 contig_1 cds 1737254 1737436 - GCA000560365_01676 yjbJ UPF0337 protein SAS1561 COG:COG3237, COG:S, RefSeq:WP_000752913.1, SO:0001217, UniParc:UPI00004B5C23, UniRef:UniRef100_Q2FGA1, UniRef:UniRef50_Q2FXV1, UniRef:UniRef90_Q2FXV1 contig_1 cds 1737536 1737958 - GCA000560365_01677 cymR cysteine metabolism transcriptional regulator CymR COG:COG1959, COG:K, KEGG:K17472, RefSeq:WP_000704122.1, SO:0001217, UniParc:UPI00000D7899, UniRef:UniRef100_A0A7Z7W340, UniRef:UniRef50_B9E703, UniRef:UniRef90_A0A2X2K6J6 contig_1 cds 1738043 1739317 + GCA000560365_01678 rarA AAA+ ATPase domain-containing protein COG:COG2256, COG:L, KEGG:K07478, RefSeq:WP_000102735.1, SO:0001217, UniParc:UPI00004B5C24, UniRef:UniRef100_Q2FXU8, UniRef:UniRef50_O34528, UniRef:UniRef90_Q2FXU8 contig_1 cds 1739478 1740251 - GCA000560365_01679 tcdA HesA/moeB/thiF family protein COG:COG1179, COG:J, RefSeq:WP_000682646.1, SO:0001217, UniParc:UPI0000054276, UniRef:UniRef100_Q2FXU7, UniRef:UniRef50_A0A2S5CXU7, UniRef:UniRef90_A0A077UH91 contig_1 ncRNA 1740444 1740634 - GCA000560365_01680 6S 6S / SsrS RNA RFAM:RF00013, SO:0000655 contig_1 cds 1740712 1742478 - GCA000560365_01681 aspS aspartate--tRNA ligase COG:COG0173, COG:J, EC:6.1.1.12, GO:0000166, GO:0003676, GO:0004812, GO:0004815, GO:0005524, GO:0005737, GO:0006418, GO:0006422, GO:0016740, GO:0016874, RefSeq:WP_000044799.1, SO:0001217, UniParc:UPI0000030ADD, UniRef:UniRef100_Q2FG97, UniRef:UniRef50_A9KIA6, UniRef:UniRef90_Q2FXU5 contig_1 cds 1742494 1743756 - GCA000560365_01682 hisS histidine--tRNA ligase COG:COG0124, COG:J, EC:6.1.1.21, GO:0004821, GO:0005524, GO:0005737, GO:0006427, GO:0016740, KEGG:K01892, RefSeq:WP_000590826.1, SO:0001217, UniParc:UPI000002FBCF, UniRef:UniRef100_Q2FXU4, UniRef:UniRef50_O32039, UniRef:UniRef90_Q2FXU4 contig_1 cds 1744217 1745092 - GCA000560365_01683 lytH putative cell wall amidase LytH COG:COG0860, COG:M, EC:3.5.1.-, GO:0005576, GO:0008745, GO:0009253, GO:0030288, GO:0071555, KEGG:K01448, RefSeq:WP_000717800.1, SO:0001217, UniParc:UPI0000054273, UniRef:UniRef100_Q2FXU3, UniRef:UniRef50_Q2FXU3, UniRef:UniRef90_Q2FXU3 contig_1 cds 1745089 1745541 - GCA000560365_01684 dtd D-aminoacyl-tRNA deacylase COG:COG1490, COG:J, EC:3.1.1.96, GO:0000049, GO:0004045, GO:0005737, GO:0008152, GO:0019478, GO:0043908, GO:0051500, GO:0106026, KEGG:K07560, RefSeq:WP_000869983.1, SO:0001217, UniParc:UPI000012993E, UniRef:UniRef100_Q2FXU2, UniRef:UniRef50_Q2FXU2, UniRef:UniRef90_Q2FXU2 contig_1 cds 1745553 1747763 - GCA000560365_01685 relA GTP pyrophosphokinase COG:COG0317, COG:TK, EC:2.7.6.5, GO:0005524, GO:0005525, GO:0005886, GO:0008728, GO:0015970, GO:0016301, KEGG:K01139, SO:0001217, UniParc:UPI0000054270, UniRef:UniRef100_Q6GG70, UniRef:UniRef50_Q931Q4, UniRef:UniRef90_Q6GG70 contig_1 cds 1748170 1748688 - GCA000560365_01686 apt adenine phosphoribosyltransferase COG:COG0503, COG:F, EC:2.4.2.7, GO:0002055, GO:0003999, GO:0005737, GO:0006166, GO:0006168, GO:0009116, GO:0016208, GO:0044209, KEGG:K00759, RefSeq:WP_000364542.1, SO:0001217, UniParc:UPI000005426F, UniRef:UniRef100_Q2FXU0, UniRef:UniRef50_Q1G9R7, UniRef:UniRef90_Q2FXU0 contig_1 cds 1748710 1750983 - GCA000560365_01687 recJ single-stranded-DNA-specific exonuclease RecJ COG:COG4199, COG:L, EC:3.1.-.-, GO:0006281, GO:0006310, GO:0008409, KEGG:K07462, RefSeq:WP_000594993.1, SO:0001217, UniParc:UPI000005426E, UniRef:UniRef100_Q2FXT9, UniRef:UniRef50_A0AAP8TSV1, UniRef:UniRef90_A0A390R1U9 contig_1 cds 1751186 1753465 - GCA000560365_01688 secDF protein translocase subunit SecDF COG:COG0342, COG:U, RefSeq:WP_000749795.1, SO:0001217, UniParc:UPI00000D7784, UniRef:UniRef100_W8UA89, UniRef:UniRef50_B9E715, UniRef:UniRef90_W8UA89 contig_1 cds 1753740 1754000 - GCA000560365_01689 yajC preprotein translocase subunit YajC COG:COG1862, COG:U, GO:0005886, GO:0009306, GO:0015450, KEGG:K03210, RefSeq:WP_001160682.1, SO:0001217, UniParc:UPI000005426C, UniRef:UniRef100_Q2FXT7, UniRef:UniRef50_B9DNG6, UniRef:UniRef90_A0A2K4AGL2 contig_1 cds 1754019 1755158 - GCA000560365_01690 tgt tRNA guanosine(34) transglycosylase Tgt COG:COG0343, COG:J, EC:2.4.2.29, GO:0002099, GO:0005737, GO:0005829, GO:0006400, GO:0008479, GO:0008616, GO:0046872, GO:0101030, KEGG:K00773, RefSeq:WP_001112045.1, SO:0001217, UniParc:UPI0000136CFD, UniRef:UniRef100_Q2FXT6, UniRef:UniRef50_O32053, UniRef:UniRef90_Q2FXT6 contig_1 cds 1755181 1756206 - GCA000560365_01691 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA COG:COG0809, COG:J, EC:2.4.99.17, GO:0002099, GO:0005737, GO:0008616, GO:0016740, GO:0016853, GO:0051075, KEGG:K07568, RefSeq:WP_001019172.1, SO:0001217, UniParc:UPI00004B5C26, UniRef:UniRef100_Q2FXT5, UniRef:UniRef50_A8AYK5, UniRef:UniRef90_Q2FXT5 contig_1 cds 1756208 1757212 - GCA000560365_01692 ruvB Holliday junction branch migration DNA helicase RuvB COG:COG2255, COG:L, EC:3.6.4.-, EC:3.6.4.12, GO:0000400, GO:0003677, GO:0003689, GO:0005524, GO:0005737, GO:0006281, GO:0006310, GO:0009378, GO:0016887, GO:0036121, GO:0048476, GO:0061749, GO:0061775, GO:0140584, GO:0140665, GO:0140849, GO:1990518, RefSeq:WP_001005767.1, SO:0001217, UniParc:UPI0000054269, UniRef:UniRef100_Q2FXT4, UniRef:UniRef50_O32055, UniRef:UniRef90_Q2FXT4 contig_1 cds 1757244 1757846 - GCA000560365_01693 ruvA Holliday junction branch migration protein RuvA COG:COG0632, COG:L, EC:3.6.4.12, GO:0000400, GO:0003678, GO:0005524, GO:0005737, GO:0006281, GO:0006310, GO:0009378, GO:0009379, GO:0036121, GO:0048476, GO:0061749, GO:1990518, RefSeq:WP_000271547.1, SO:0001217, UniParc:UPI00004B5C27, UniRef:UniRef100_Q2FXT3, UniRef:UniRef50_Q2FXT3, UniRef:UniRef90_Q2FXT3 contig_1 cds 1757860 1758318 - GCA000560365_01694 pheB ACT domain-containing protein COG:COG4492, COG:R, EC:5.4.99.5, KEGG:K06209, RefSeq:WP_001548994.1, SO:0001217, UniParc:UPI0000054266, UniRef:UniRef100_Q2FXT2, UniRef:UniRef50_Q2FXT2, UniRef:UniRef90_Q2FXT2 contig_1 cds 1758328 1759620 - GCA000560365_01695 obgE GTPase ObgE COG:COG0536, COG:DL, EC:3.6.5.-, GO:0000287, GO:0003924, GO:0005525, GO:0005737, GO:0042254, RefSeq:WP_000496100.1, SO:0001217, UniParc:UPI00000D7796, UniRef:UniRef100_Q2FXT1, UniRef:UniRef50_P20964, UniRef:UniRef90_Q2FXT1 contig_1 cds 1759975 1760259 - GCA000560365_01696 rpmA 50S ribosomal protein L27 COG:COG0211, COG:J, GO:0000315, GO:0003735, GO:0006412, GO:0022625, KEGG:K02899, RefSeq:WP_000916187.1, SO:0001217, UniParc:UPI0000133E1A, UniRef:UniRef100_Q2FXT0, UniRef:UniRef50_Q2FXT0, UniRef:UniRef90_Q2FXT0 contig_1 cds 1760271 1760591 - GCA000560365_01697 prp Ribosomal processing cysteine protease Prp COG:COG2868, COG:S, EC:3.4.22.-, GO:0006508, GO:0008234, GO:0042254, KEGG:K07584, RefSeq:WP_000633692.1, SO:0001217, UniParc:UPI0000054263, UniRef:UniRef100_Q2FXS9, UniRef:UniRef50_Q2FXS9, UniRef:UniRef90_Q2FXS9 contig_1 cds 1760597 1760905 - GCA000560365_01698 rplU 50S ribosomal protein L21 COG:COG0261, COG:J, GO:0003723, GO:0003735, GO:0005737, GO:0005840, GO:0006412, GO:0019843, GO:1990904, KEGG:K02888, RefSeq:WP_000457386.1, SO:0001217, UniParc:UPI00000D766C, UniRef:UniRef100_Q2FXS8, UniRef:UniRef50_Q2FXS8, UniRef:UniRef90_Q2FXS8 contig_1 ncRNA-region 1760918 1761045 - Ribosomal protein L21 leader RFAM:RF00559, SO:0000140 contig_1 cds 1761072 1761602 - GCA000560365_01699 mreD rod shape-determining protein MreD COG:COG2891, COG:M, GO:0008360, GO:0016020, RefSeq:WP_001259925.1, SO:0001217, UniParc:UPI00000D7842, UniRef:UniRef100_Q2FXS7, UniRef:UniRef50_A0A0D0RNW4, UniRef:UniRef90_A0A0U1MP65 contig_1 cds 1761602 1762444 - GCA000560365_01700 mreC rod shape-determining protein MreC COG:COG1792, COG:DZ, GO:0008360, KEGG:K03570, RefSeq:WP_000911041.1, SO:0001217, UniParc:UPI00000D78B1, UniRef:UniRef100_Q2FXS6, UniRef:UniRef50_A0A0H2VGM0, UniRef:UniRef90_D7URR5 contig_1 cds 1762837 1763310 - GCA000560365_01701 DUF4930 domain-containing protein RefSeq:WP_001236735.1, SO:0001217, UniParc:UPI0000054C11, UniRef:UniRef100_Q2FXS4, UniRef:UniRef50_A0A1J3ZXU8, UniRef:UniRef90_Q2FXS4 contig_1 cds 1763784 1764068 - GCA000560365_01702 MW1603 protein RefSeq:WP_000171859.1, SO:0001217, UniParc:UPI00000D7835, UniRef:UniRef100_Q2FXS3, UniRef:UniRef50_Q2FXS3, UniRef:UniRef90_Q2FXS3 contig_1 cds 1764136 1764822 - GCA000560365_01703 radC DNA repair protein RadC GO:0003677, GO:0006281, GO:0006508, GO:0008237, GO:0046872, KEGG:K03630, RefSeq:WP_000692870.1, SO:0001217, UniParc:UPI00001330C5, UniRef:UniRef100_P31337, UniRef:UniRef50_P31337, UniRef:UniRef90_P31337 contig_1 cds 1764819 1765526 - GCA000560365_01704 gspO Prepilin peptidase A24 N-terminal domain-containing protein COG:COG1989, COG:NU, RefSeq:WP_000261115.1, SO:0001217, UniParc:UPI00000D76C4, UniRef:UniRef100_Q2FXS1, UniRef:UniRef50_A0A077UH67, UniRef:UniRef90_Q2FXS1 contig_1 cds 1765796 1767067 - GCA000560365_01705 folC tetrahydrofolate synthase COG:COG0285, COG:H, RefSeq:WP_001108346.1, SO:0001217, UniParc:UPI0000054C15, UniRef:UniRef100_Q2FXR9, UniRef:UniRef50_Q2FXR9, UniRef:UniRef90_Q2FXR9 contig_1 cds 1767080 1769710 - GCA000560365_01706 valS valine--tRNA ligase COG:COG0525, COG:J, EC:6.1.1.9, GO:0000166, GO:0002161, GO:0004812, GO:0004832, GO:0005524, GO:0005829, GO:0006438, RefSeq:WP_000425353.1, SO:0001217, UniParc:UPI0000030ADA, UniRef:UniRef100_Q2FXR8, UniRef:UniRef50_P11931, UniRef:UniRef90_Q2FXR8 contig_1 ncRNA-region 1769754 1770055 - T-box leader RFAM:RF00230, SO:0000140 contig_1 cds 1770113 1770673 + GCA000560365_01707 tag DNA-3-methyladenine glycosylase I COG:COG2818, COG:L, EC:3.2.2.20, KEGG:K01246, RefSeq:WP_001001228.1, SO:0001217, UniParc:UPI00000B45CC, UniRef:UniRef100_Q2FXR7, UniRef:UniRef50_Q2FXR7, UniRef:UniRef90_Q2FXR7 contig_1 cds 1770896 1771963 - GCA000560365_01708 abrB AbrB family transcriptional regulator COG:COG3180, COG:R, KEGG:K07120, SO:0001217, UniParc:UPI00015744A1, UniRef:UniRef100_Q2FXR6, UniRef:UniRef50_Q2FXR6, UniRef:UniRef90_Q2FXR6 contig_1 cds 1772165 1773451 - GCA000560365_01709 hemL glutamate-1-semialdehyde 2,1-aminomutase COG:COG0001, COG:H, EC:5.4.3.8, GO:0005737, GO:0006782, GO:0008483, GO:0030170, GO:0033014, GO:0042286, RefSeq:WP_001270868.1, SO:0001217, UniParc:UPI0000054C19, UniRef:UniRef100_Q2FXR4, UniRef:UniRef50_Q2S1S3, UniRef:UniRef90_Q2FXR4 contig_1 cds 1773499 1774473 - GCA000560365_01710 hemB porphobilinogen synthase COG:COG0113, COG:H, EC:4.2.1.24, GO:0003824, GO:0004655, GO:0005829, GO:0006782, GO:0008270, GO:0033014, GO:0046872, KEGG:K01698, RefSeq:WP_000667126.1, SO:0001217, UniParc:UPI0000054C1A, UniRef:UniRef100_Q2FXR3, UniRef:UniRef50_Q2FXR3, UniRef:UniRef90_Q2FXR3 contig_1 cds 1774476 1775144 - GCA000560365_01711 hemD Uroporphyrinogen-III synthase COG:COG1587, COG:H, RefSeq:WP_000805950.1, SO:0001217, UniParc:UPI0000054C1B, UniRef:UniRef100_Q2FXR2, UniRef:UniRef50_Q5HNN4, UniRef:UniRef90_A0A390VSB3 contig_1 cds 1775166 1776092 - GCA000560365_01712 hemC hydroxymethylbilane synthase COG:COG0181, COG:H, EC:2.5.1.61, GO:0004418, GO:0005737, GO:0006782, GO:0033014, KEGG:K01749, RefSeq:WP_001230228.1, SO:0001217, UniParc:UPI000012C492, UniRef:UniRef100_O34090, UniRef:UniRef50_O34090, UniRef:UniRef90_O34090 contig_1 cds 1776134 1776949 - GCA000560365_01713 ccmC Cytochrome c assembly protein domain-containing protein COG:COG0755, COG:O, KEGG:K02497, RefSeq:WP_001157329.1, SO:0001217, UniParc:UPI0000054C1D, UniRef:UniRef100_Q2FXR0, UniRef:UniRef50_Q2FXR0, UniRef:UniRef90_Q2FXR0 contig_1 cds 1776971 1778317 - GCA000560365_01714 hemA glutamyl-tRNA reductase COG:COG0373, COG:H, EC:1.2.1.70, GO:0006782, GO:0008883, GO:0050661, KEGG:K02492, RefSeq:WP_000545451.1, SO:0001217, UniParc:UPI000012C435, UniRef:UniRef100_Q2FG64, UniRef:UniRef50_Q65GJ9, UniRef:UniRef90_Q2FXQ9 contig_1 cds 1778534 1779124 - GCA000560365_01715 yihA ribosome biogenesis GTP-binding protein YihA/YsxC COG:COG0218, COG:D, GO:0000917, GO:0003924, GO:0005525, GO:0005737, GO:0005829, GO:0042254, GO:0043022, GO:0046872, RefSeq:WP_000867697.1, SO:0001217, UniParc:UPI0000054C1F, UniRef:UniRef100_Q2FXQ8, UniRef:UniRef50_Q2FXQ8, UniRef:UniRef90_Q2FXQ8 contig_1 cds 1779278 1780540 - GCA000560365_01716 clpX ATP-dependent Clp protease ATP-binding subunit ClpX COG:COG1219, COG:O, GO:0005524, GO:0008270, GO:0009376, GO:0016887, GO:0046983, GO:0051082, GO:0051301, GO:0051603, GO:0140662, RefSeq:WP_000472302.1, SO:0001217, UniParc:UPI0000054C20, UniRef:UniRef100_Q2FXQ7, UniRef:UniRef50_Q2FXQ7, UniRef:UniRef90_Q2FXQ7 contig_1 cds 1780691 1781992 - GCA000560365_01717 tig trigger factor COG:COG0544, COG:O, EC:5.2.1.8, GO:0003755, GO:0005737, GO:0005854, GO:0015031, GO:0043022, GO:0043335, GO:0044183, GO:0051082, GO:0051083, GO:0051301, GO:0061077, GO:0140839, GO:0140840, RefSeq:WP_000127573.1, SO:0001217, UniParc:UPI0000054C21, UniRef:UniRef100_Q2FXQ6, UniRef:UniRef50_P80698, UniRef:UniRef90_Q2FXQ6 contig_1 cds 1782155 1783084 - GCA000560365_01718 TPR domain protein RefSeq:WP_001280018.1, SO:0001217, UniParc:UPI00004B5C2A, UniRef:UniRef100_Q2FXQ4, UniRef:UniRef50_Q5HNM7, UniRef:UniRef90_A0A380E4T8 contig_1 cds 1783103 1783711 - GCA000560365_01719 ymaB Nudix hydrolase domain-containing protein COG:COG4112, COG:R, RefSeq:WP_000032657.1, SO:0001217, UniParc:UPI0000054C24, UniRef:UniRef100_Q2FXQ3, UniRef:UniRef50_Q2FXQ3, UniRef:UniRef90_Q2FXQ3 contig_1 cds 1783853 1784209 - GCA000560365_01720 rplT 50S ribosomal protein L20 COG:COG0292, COG:J, GO:0000027, GO:0000315, GO:0003735, GO:0005840, GO:0006412, GO:0019843, GO:0022625, GO:1990904, RefSeq:WP_001138360.1, SO:0001217, UniParc:UPI0000054C25, UniRef:UniRef100_Q2FXQ1, UniRef:UniRef50_P13070, UniRef:UniRef90_Q49YB0 contig_1 cds 1784256 1784456 - GCA000560365_01721 rpmI 50S ribosomal protein L35 COG:COG0291, COG:J, GO:0003735, GO:0005840, GO:0006412, GO:0022625, KEGG:K02916, RefSeq:WP_001125540.1, SO:0001217, UniParc:UPI0000054C26, UniRef:UniRef100_Q2FXQ0, UniRef:UniRef50_P55874, UniRef:UniRef90_Q2FXQ0 contig_1 cds 1784485 1785045 - GCA000560365_01722 infC translation initiation factor IF-3 COG:COG0290, COG:J, GO:0003743, GO:0005829, GO:0006413, GO:0016020, GO:0032790, GO:0043022, SO:0001217, UniParc:UPI0001AB195A, UniRef:UniRef100_A0A0G2LSY7, UniRef:UniRef50_B9DNC6, UniRef:UniRef90_B9DNC6 contig_1 ncRNA-region 1785041 1785166 - Ribosomal protein L20 leader RFAM:RF00558, SO:0000140 contig_1 cds 1785241 1786734 - GCA000560365_01723 lysP Amino acid permease/ SLC12A domain-containing protein COG:COG0833, COG:E, KEGG:K11733, RefSeq:WP_000049154.1, SO:0001217, UniParc:UPI0000054C28, UniRef:UniRef100_Q2FXP8, UniRef:UniRef50_P25737, UniRef:UniRef90_Q2FXP8 contig_1 ncRNA-region 1786879 1787054 - Lysine riboswitch aptamer RFAM:RF00168, SO:0000035 contig_1 cds 1787160 1789097 - GCA000560365_01724 thrS threonine--tRNA ligase COG:COG0441, COG:J, EC:6.1.1.3, GO:0000049, GO:0004829, GO:0005524, GO:0005737, GO:0006435, GO:0016740, GO:0046872, KEGG:K01868, RefSeq:WP_000435132.1, SO:0001217, UniParc:UPI0000030ADF, UniRef:UniRef100_Q2FG54, UniRef:UniRef50_P18255, UniRef:UniRef90_B9DNC9 contig_1 cds 1789510 1790430 - GCA000560365_01725 dnaI primosomal protein DnaI COG:COG1484, COG:L, RefSeq:WP_000808621.1, SO:0001217, UniParc:UPI00000CABBE, UniRef:UniRef100_Q2FXP5, UniRef:UniRef50_Q2FXP5, UniRef:UniRef90_Q2FXP5 contig_1 cds 1790430 1791830 - GCA000560365_01726 dnaB2 DnaD domain-containing protein COG:COG3611, COG:L, KEGG:K03346, RefSeq:WP_000533485.1, SO:0001217, UniParc:UPI0000054C2D, UniRef:UniRef100_Q2FXP4, UniRef:UniRef50_Q2FXP4, UniRef:UniRef90_Q2FXP4 contig_1 cds 1791831 1792301 - GCA000560365_01727 nrdR transcriptional regulator NrdR COG:COG1327, COG:K, GO:0003677, GO:0005524, GO:0006355, GO:0008270, GO:0045892, GO:0140110, RefSeq:WP_000650082.1, SO:0001217, UniParc:UPI0000054C2E, UniRef:UniRef100_Q2FXP3, UniRef:UniRef50_Q5M5X8, UniRef:UniRef90_Q2FXP3 contig_1 cds 1792511 1793536 - GCA000560365_01728 gap type I glyceraldehyde-3-phosphate dehydrogenase COG:COG0057, COG:G, EC:1.2.1.12, GO:0004365, GO:0005737, GO:0006006, GO:0006096, GO:0016620, GO:0050661, GO:0051287, RefSeq:WP_000106141.1, SO:0001217, UniParc:UPI00000D7659, UniRef:UniRef100_Q5HF86, UniRef:UniRef50_Q6GG19, UniRef:UniRef90_Q5HF86 contig_1 cds 1793706 1794329 - GCA000560365_01729 coaE dephospho-CoA kinase COG:COG0237, COG:H, EC:2.7.1.24, GO:0004140, GO:0005524, GO:0005737, GO:0015937, KEGG:K00859, RefSeq:WP_001127167.1, SO:0001217, UniParc:UPI0000127CF3, UniRef:UniRef100_Q2FG49, UniRef:UniRef50_Q49YB9, UniRef:UniRef90_Q2FG49 contig_1 cds 1794345 1795217 - GCA000560365_01730 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase COG:COG0266, COG:L, EC:3.2.2.23, EC:4.2.99.18, GO:0003676, GO:0003684, GO:0003906, GO:0006281, GO:0006284, GO:0008270, GO:0008534, GO:0016799, GO:0019104, KEGG:K10563, RefSeq:WP_001114452.1, SO:0001217, UniParc:UPI0000054C31, UniRef:UniRef100_Q2FXP0, UniRef:UniRef50_A0A7T1B1X4, UniRef:UniRef90_A0A811I2Z9 contig_1 cds 1795233 1797863 - GCA000560365_01731 polA DNA polymerase I COG:COG0749, COG:L, EC:2.7.7.7, GO:0003676, GO:0003677, GO:0003887, GO:0006261, GO:0008408, RefSeq:WP_001038308.1, SO:0001217, UniParc:UPI00000D77CB, UniRef:UniRef100_Q2FXN9, UniRef:UniRef50_K9B5S8, UniRef:UniRef90_A0AAJ4YWX0 contig_1 cds 1798157 1799644 - GCA000560365_01732 Glucosyltransferase RefSeq:WP_000849439.1, SO:0001217, UniParc:UPI00003B1AEF, UniRef:UniRef100_Q2FXN8, UniRef:UniRef50_Q2FXN8, UniRef:UniRef90_Q2FXN8 contig_1 cds 1800143 1801807 - GCA000560365_01733 pnpS two-component system histidine kinase PnpS COG:COG5002, COG:T, GO:0000155, GO:0016310, SO:0001217, UniParc:UPI0000054C34, UniRef:UniRef100_Q2FXN7, UniRef:UniRef50_A0A380G833, UniRef:UniRef90_A0A7H9C746 contig_1 cds 1801804 1802508 - GCA000560365_01734 ompR Alkaline phosphatase synthesis transcriptional regulatory protein COG:COG0745, COG:TK, RefSeq:WP_000080028.1, SO:0001217, UniParc:UPI000002E89E, UniRef:UniRef100_Q2FXN6, UniRef:UniRef50_A0A9D3AXH1, UniRef:UniRef90_A0A0S3E1C9 contig_1 cds 1802898 1804166 - GCA000560365_01735 icd NADP-dependent isocitrate dehydrogenase COG:C, COG:COG0538, EC:1.1.1.42, GO:0000287, GO:0004450, GO:0006097, GO:0006099, GO:0051287, RefSeq:WP_000123165.1, SO:0001217, UniParc:UPI0000054C35, UniRef:UniRef100_Q5HF79, UniRef:UniRef50_Q5HNL1, UniRef:UniRef90_Q8NW61 contig_1 cds 1804215 1805336 - GCA000560365_01736 gltA citrate synthase COG:C, COG:COG0372, RefSeq:WP_000829167.1, SO:0001217, UniParc:UPI00000D76BC, UniRef:UniRef100_W8U5A3, UniRef:UniRef50_P39120, UniRef:UniRef90_W8U5A3 contig_1 cds 1805684 1807045 + GCA000560365_01737 ansP Amino acid permease/ SLC12A domain-containing protein COG:COG1113, COG:E, RefSeq:WP_000818525.1, SO:0001217, UniParc:UPI00000522DA, UniRef:UniRef100_Q2FXN2, UniRef:UniRef50_Q2FXN2, UniRef:UniRef90_Q2FXN2 contig_1 cds 1807078 1807884 - GCA000560365_01738 IS1182 family transposase GO:0004803, KEGG:K07487, RefSeq:WP_001549023.1, SO:0001217, UniParc:UPI000069AAE0, UniRef:UniRef100_Q2FXN1, UniRef:UniRef50_A0A9P2Z0V2, UniRef:UniRef90_A0AAN1ZQC3 contig_1 cds 1807902 1808729 - GCA000560365_01739 Truncated transposase, putative SO:0001217, UniParc:UPI0000054C38, UniRef:UniRef100_Q2FXN0, UniRef:UniRef50_Q2FXN0, UniRef:UniRef90_Q2FXN0 contig_1 ncRNA 1808766 1809003 + GCA000560365_01740 tsr24 S. aureus tsr24 small RNA RFAM:RF02577, SO:0000655 contig_1 cds 1809370 1811127 - GCA000560365_01741 pyk pyruvate kinase COG:COG3848, COG:T, EC:2.7.1.40, GO:0000287, GO:0004743, GO:0005524, GO:0006096, GO:0016301, GO:0030955, KEGG:K00873, RefSeq:WP_001232648.1, SO:0001217, UniParc:UPI00000522A3, UniRef:UniRef100_Q2FXM9, UniRef:UniRef50_Q02499, UniRef:UniRef90_Q2FXM9 contig_1 cds 1811149 1812117 - GCA000560365_01742 pfkA 6-phosphofructokinase COG:COG0205, COG:G, EC:2.7.1.11, GO:0003872, GO:0005524, GO:0005945, GO:0006002, GO:0006096, GO:0016208, GO:0030388, GO:0042802, GO:0046872, GO:0048029, GO:0061621, GO:0070095, KEGG:K00850, RefSeq:WP_000717561.1, SO:0001217, UniParc:UPI0000054C39, UniRef:UniRef100_Q2FXM8, UniRef:UniRef50_Q2FXM8, UniRef:UniRef90_Q2FXM8 contig_1 cds 1812386 1813330 - GCA000560365_01743 accA acetyl-CoA carboxylase carboxyltransferase subunit alpha COG:COG0825, COG:I, EC:2.1.3.15, EC:6.4.1.2, GO:0003989, GO:0005524, GO:0006633, GO:0009317, GO:0016743, GO:2001295, RefSeq:WP_000883645.1, SO:0001217, UniParc:UPI0000054C3A, UniRef:UniRef100_Q2FXM7, UniRef:UniRef50_Q9HXZ2, UniRef:UniRef90_Q2FXM7 contig_1 cds 1813330 1814187 - GCA000560365_01744 accD acetyl-CoA carboxylase, carboxyltransferase subunit beta COG:COG0777, COG:I, EC:2.1.3.15, EC:6.4.1.2, GO:0003989, GO:0005524, GO:0006633, GO:0008270, GO:0009317, GO:0016743, GO:2001295, RefSeq:WP_000471571.1, SO:0001217, UniParc:UPI0000054C3B, UniRef:UniRef100_Q2FXM6, UniRef:UniRef50_C0SP93, UniRef:UniRef90_Q2FXM6 contig_1 cds 1814382 1815611 - GCA000560365_01745 sfcA NADP-dependent malic enzyme (Conversion of malate into pyruvate) COG:C, COG:COG0281, RefSeq:WP_000058383.1, SO:0001217, UniParc:UPI0000054C3C, UniRef:UniRef100_Q2FXM5, UniRef:UniRef50_A0A2U3KL65, UniRef:UniRef90_A0A7U7PYW9 contig_1 cds 1816061 1819258 - GCA000560365_01746 dnaE DNA polymerase III subunit alpha COG:COG0587, COG:L, EC:2.7.7.7, GO:0003676, GO:0003887, GO:0005737, GO:0006260, GO:0008408, RefSeq:WP_000226911.1, SO:0001217, UniParc:UPI00004B5C2B, UniRef:UniRef100_Q5HF71, UniRef:UniRef50_Q9F1K0, UniRef:UniRef90_Q9F1K0 contig_1 cds 1819279 1820220 - GCA000560365_01747 pde2 pApA hydrolase Pde2 BlastRules:WP_000626074, COG:COG0618, COG:FT, EC:3.1.13.3, EC:3.1.3.7, KEGG:K06881, RefSeq:WP_000626074.1, SO:0001217, UniParc:UPI00000D9E7E, UniRef:UniRef100_Q2FXM3, UniRef:UniRef50_A0A7U7JV59, UniRef:UniRef90_A0A0U1MNX7 contig_1 cds 1820481 1821779 - GCA000560365_01748 ytoI CBS domain-containing protein COG:COG4109, COG:K, RefSeq:WP_000160435.1, SO:0001217, UniParc:UPI0000054C3F, UniRef:UniRef100_Q2FXM2, UniRef:UniRef50_A0A7U7JV62, UniRef:UniRef90_A0A7U7JV62 contig_1 cds 1821984 1822397 + GCA000560365_01749 uspA UspA domain-containing protein COG:COG0589, COG:T, RefSeq:WP_000277602.1, SO:0001217, UniParc:UPI00000D7756, UniRef:UniRef100_Q2FXM1, UniRef:UniRef50_Q2FXM1, UniRef:UniRef90_Q2FXM1 contig_1 cds 1822702 1823391 - GCA000560365_01750 ulaG metal-dependent hydrolase COG:COG2220, COG:G, GO:0016787, RefSeq:WP_000777188.1, SO:0001217, UniParc:UPI000013B147, UniRef:UniRef100_Q2FXM0, UniRef:UniRef50_Q2FXM0, UniRef:UniRef90_Q2FXM0 contig_1 cds 1823566 1824621 + GCA000560365_01751 pepP putative peptidase SAUSA300_1654 COG:COG0006, COG:E, EC:3.4.-.-, GO:0016787, GO:0046872, RefSeq:WP_000161661.1, SO:0001217, UniParc:UPI00004B5C2C, UniRef:UniRef100_Q2FXL9, UniRef:UniRef50_Q7A552, UniRef:UniRef90_Q7A552 contig_1 cds 1824937 1826055 - GCA000560365_01752 ald alanine dehydrogenase COG:COG0686, COG:E, EC:1.4.1.1, GO:0000286, GO:0005886, GO:0042853, KEGG:K00259, RefSeq:WP_000689998.1, SO:0001217, UniParc:UPI00000D9E81, UniRef:UniRef100_Q2FXL7, UniRef:UniRef50_P17556, UniRef:UniRef90_Q2FXL7 contig_1 cds 1826196 1826696 + GCA000560365_01753 uspA Putative universal stress protein MW1653 COG:COG0589, COG:T, GO:0005737, RefSeq:WP_000634175.1, SO:0001217, UniParc:UPI0000054C46, UniRef:UniRef100_Q2FXL6, UniRef:UniRef50_Q2FXL6, UniRef:UniRef90_Q2FXL6 contig_1 cds 1826942 1828144 - GCA000560365_01754 ackA Acetate kinase COG:C, COG:COG0282, EC:2.7.2.1, GO:0000287, GO:0005524, GO:0005737, GO:0006083, GO:0006085, GO:0008776, KEGG:K00925, RefSeq:WP_000040069.1, SO:0001217, UniParc:UPI000012529B, UniRef:UniRef100_Q2FXL5, UniRef:UniRef50_O52594, UniRef:UniRef90_Q2FXL5 contig_1 cds 1828232 1829179 - GCA000560365_01755 ytxK Adenine-specific methyltransferase COG:COG0827, COG:L, RefSeq:WP_000840574.1, SO:0001217, UniParc:UPI00000D9E82, UniRef:UniRef100_Q2FXL4, UniRef:UniRef50_B9DN82, UniRef:UniRef90_A0A077UL38 contig_1 cds 1829302 1829796 - GCA000560365_01756 tpx thiol peroxidase COG:COG2077, COG:O, EC:1.11.1.-, EC:1.11.1.24, GO:0008379, GO:0016684, KEGG:K11065, RefSeq:WP_000136253.1, SO:0001217, UniParc:UPI000013729F, UniRef:UniRef100_Q5HF61, UniRef:UniRef50_P80864, UniRef:UniRef90_P66954 contig_1 cds 1829894 1830664 - GCA000560365_01757 tauE putative membrane transporter protein COG:COG0730, COG:P, RefSeq:WP_000365320.1, SO:0001217, UniParc:UPI0000054C4B, UniRef:UniRef100_Q2FXL2, UniRef:UniRef50_A0A239TZL2, UniRef:UniRef90_A0A391DGZ3 contig_1 cds 1830708 1831931 - GCA000560365_01758 thiI putative tRNA sulfurtransferase COG:COG0301, COG:HJ, EC:2.8.1.4, GO:0000049, GO:0002937, GO:0004810, GO:0005524, GO:0005829, GO:0009228, GO:0009229, GO:0052837, GO:0140741, KEGG:K03151, RefSeq:WP_000872653.1, SO:0001217, UniParc:UPI0000054C4C, UniRef:UniRef100_Q2FXL1, UniRef:UniRef50_Q2FXL1, UniRef:UniRef90_Q2FXL1 contig_1 cds 1831931 1833097 - GCA000560365_01759 nifS Aminotransferase COG:COG1104, COG:E, SO:0001217, UniParc:UPI0001B3AAB6, UniRef:UniRef100_A0A0D6HH30, UniRef:UniRef50_A0A0D6HH30, UniRef:UniRef90_A0A0D6HH30 contig_1 cds 1833442 1835136 - GCA000560365_01760 ezrA septation ring formation regulator EzrA COG:COG4477, COG:D, GO:0000917, GO:0000921, GO:0005886, GO:0005940, KEGG:K06286, RefSeq:WP_000244865.1, SO:0001217, UniParc:UPI0000054C4F, UniRef:UniRef100_Q2FG20, UniRef:UniRef50_Q5HNI8, UniRef:UniRef90_P64002 contig_1 cds 1835273 1835737 + GCA000560365_01761 msrC GAF domain-containing protein COG:COG1956, COG:VT, RefSeq:WP_000207845.1, SO:0001217, UniParc:UPI00004B5C2F, UniRef:UniRef100_Q2FXK7, UniRef:UniRef50_A0A0A5FWD3, UniRef:UniRef90_A0A0U1MMX1 contig_1 cds 1835981 1836583 + GCA000560365_01762 rpsD 30S ribosomal protein S4 COG:COG0522, COG:J, GO:0003735, GO:0006412, GO:0015935, GO:0019843, GO:0042274, KEGG:K02986, RefSeq:WP_000090512.1, SO:0001217, UniParc:UPI0000135022, UniRef:UniRef100_Q2FXK6, UniRef:UniRef50_P21466, UniRef:UniRef90_Q2FXK6 contig_1 cds 1836799 1837542 - GCA000560365_01763 ugpQ GP-PDE domain-containing protein COG:COG0584, COG:I, EC:3.1.4.46, KEGG:K01126, RefSeq:WP_000174282.1, SO:0001217, UniParc:UPI000005439B, UniRef:UniRef100_Q2FXK4, UniRef:UniRef50_Q2FXK4, UniRef:UniRef90_Q2FXK4 contig_1 cds 1837622 1838068 + GCA000560365_01764 osmC Organic hydroperoxide resistance protein COG:COG1764, COG:V, RefSeq:WP_000553926.1, SO:0001217, UniParc:UPI00004B5C30, UniRef:UniRef100_Q2FXK3, UniRef:UniRef50_B9DN81, UniRef:UniRef90_A0A0D1JRC2 contig_1 cds 1838182 1839342 + GCA000560365_01765 pucG Aminotransferase class V domain-containing protein COG:COG0075, COG:EF, RefSeq:WP_000291415.1, SO:0001217, UniParc:UPI0000054399, UniRef:UniRef100_Q2FXK2, UniRef:UniRef50_Q2FXK2, UniRef:UniRef90_Q2FXK2 contig_1 cds 1839329 1840933 + GCA000560365_01766 serA phosphoglycerate dehydrogenase COG:COG1760, COG:E, EC:1.1.1.95, GO:0004617, GO:0006564, RefSeq:WP_000808845.1, SO:0001217, UniParc:UPI0000054398, UniRef:UniRef100_Q2FXK1, UniRef:UniRef50_B9DN70, UniRef:UniRef90_A0A3A5LA45 contig_1 cds 1841083 1842213 - GCA000560365_01767 gph HAD family hydrolase COG:C, COG:COG0546, RefSeq:WP_000721707.1, SO:0001217, UniParc:UPI00000D9E8A, UniRef:UniRef100_Q2FXJ9, UniRef:UniRef50_A0A6N3EB75, UniRef:UniRef90_A0A389U3P7 contig_1 cds 1842320 1843786 - GCA000560365_01768 ptsG2 N-acetylglucosamine-specific PTS transporter subunit IIBC COG:COG1264, COG:G, RefSeq:WP_000276371.1, SO:0001217, UniParc:UPI0000696C65, UniRef:UniRef100_A0A1S6DFN8, UniRef:UniRef50_A0A2Y2SMF5, UniRef:UniRef90_A0A2Y2SMF5 contig_1 cds 1843914 1844531 - GCA000560365_01769 plsC 1-acyl-sn-glycerol-3-phosphate acyltransferase COG:COG0204, COG:I, RefSeq:WP_000287588.1, SO:0001217, UniParc:UPI0000054395, UniRef:UniRef100_Q2FXJ7, UniRef:UniRef50_A0A1D4JQG0, UniRef:UniRef90_A0A2K4AFG9 contig_1 cds 1844703 1845977 + GCA000560365_01770 degQ Serine protease HtrA-like COG:COG0265, COG:O, RefSeq:WP_001279338.1, SO:0001217, UniParc:UPI000005224B, UniRef:UniRef100_Q2FXJ6, UniRef:UniRef50_A0A380HKD8, UniRef:UniRef90_A0A2K4AFG2 contig_1 cds 1846071 1847333 - GCA000560365_01771 tyrS tyrosine--tRNA ligase COG:COG0162, COG:J, EC:6.1.1.1, GO:0000166, GO:0003723, GO:0004831, GO:0005524, GO:0005829, GO:0006437, KEGG:K01866, RefSeq:WP_000186029.1, SO:0001217, UniParc:UPI000002E8ED, UniRef:UniRef100_Q2FXJ5, UniRef:UniRef50_Q2FXJ5, UniRef:UniRef90_Q2FXJ5 contig_1 cds 1847715 1848620 + GCA000560365_01772 mrcB peptidoglycan glycosyltransferase COG:COG0744, COG:M, EC:2.4.99.28, KEGG:K12551, RefSeq:WP_000184370.1, SO:0001217, UniParc:UPI0000054394, UniRef:UniRef100_Q2FXJ4, UniRef:UniRef50_G5JFR8, UniRef:UniRef90_A0A6B0D5L6 contig_1 cds 1848823 1850199 - GCA000560365_01773 Cell wall surface anchor family protein SO:0001217, UniParc:UPI00044A8C13, UniRef:UniRef100_A0A380EIZ9, UniRef:UniRef50_A0A380EIZ9, UniRef:UniRef90_A0A380EIZ9 contig_1 cds 1850274 1851509 - GCA000560365_01774 Cell wall surface anchor family protein SO:0001217, UniRef:UniRef50_A0A380DVP7, UniRef:UniRef90_A0A380DVP7 contig_1 ncRNA 1851525 1851581 + GCA000560365_01775 rsaB RNA Staph. aureus A RFAM:RF01817, SO:0000655 contig_1 cds 1851805 1853472 - GCA000560365_01776 fhs formate--tetrahydrofolate ligase COG:COG2759, COG:F, EC:6.3.4.3, GO:0004329, GO:0005524, GO:0035999, RefSeq:WP_000149404.1, SO:0001217, UniParc:UPI0000696C66, UniRef:UniRef100_Q2FG06, UniRef:UniRef50_Q5HF42, UniRef:UniRef90_Q5HF42 contig_1 cds 1853913 1855619 - GCA000560365_01777 acsA acetate--CoA ligase EC:6.2.1.1, RefSeq:WP_000862083.1, SO:0001217, UniParc:UPI0000054390, UniRef:UniRef100_A0A0H3KH25, UniRef:UniRef50_P39062, UniRef:UniRef90_A0A6H4CW26 contig_1 cds 1855788 1856420 + GCA000560365_01778 N-acetyltransferase domain-containing protein EC:2.3.1.-, KEGG:K04766, RefSeq:WP_001015996.1, SO:0001217, UniParc:UPI000005438F, UniRef:UniRef100_Q2G293, UniRef:UniRef50_P39065, UniRef:UniRef90_Q2G293 contig_1 cds 1856445 1857614 + GCA000560365_01779 acuC Acetoin utilization protein AcuC COG:COG0123, COG:Q, GO:0004407, GO:0040029, GO:0045150, RefSeq:WP_001184005.1, SO:0001217, UniParc:UPI00004B5C36, UniRef:UniRef100_Q5HF39, UniRef:UniRef50_P64375, UniRef:UniRef90_P64375 contig_1 cds 1857712 1858701 - GCA000560365_01780 ccpA catabolite control protein A COG:COG1609, COG:K, GO:0000976, GO:0001228, GO:0003677, GO:0003700, GO:0005975, GO:0006355, RefSeq:WP_000219066.1, SO:0001217, UniParc:UPI000005438C, UniRef:UniRef100_Q5HF38, UniRef:UniRef50_Q5HNH3, UniRef:UniRef90_Q5HF38 contig_1 cds 1859241 1860332 - GCA000560365_01781 aroGA bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase COG:COG2876, COG:E, EC:2.5.1.54, EC:5.4.99.5, GO:0003824, GO:0009073, GO:0046417, KEGG:K13853, RefSeq:WP_000066378.1, SO:0001217, UniParc:UPI000005438A, UniRef:UniRef100_Q2G248, UniRef:UniRef50_P39912, UniRef:UniRef90_A0A7U7JV80 contig_1 cds 1861032 1862390 - GCA000560365_01782 Smooth muscle caldesmon RefSeq:WP_000193917.1, SO:0001217, UniParc:UPI00015FD6FB, UniRef:UniRef100_A0A0E8GPH7, UniRef:UniRef50_A0A0H2XJG9, UniRef:UniRef90_A0A0E8GPH7 contig_1 cds 1862464 1862955 - GCA000560365_01783 UPF0478 protein MW1682 COG:COG4768, COG:S, GO:0005886, RefSeq:WP_000383814.1, SO:0001217, UniParc:UPI0000054388, UniRef:UniRef100_Q2G247, UniRef:UniRef50_Q49YH0, UniRef:UniRef90_Q2G247 contig_1 cds 1863029 1864342 - GCA000560365_01784 murC UDP-N-acetylmuramate--L-alanine ligase COG:COG0773, COG:M, EC:6.3.2.8, GO:0005524, GO:0005737, GO:0008360, GO:0008763, GO:0009252, GO:0051301, GO:0071555, KEGG:K01924, RefSeq:WP_000150168.1, SO:0001217, UniParc:UPI00003D7D59, UniRef:UniRef100_Q2FXJ0, UniRef:UniRef50_Q2FXJ0, UniRef:UniRef90_Q2FXJ0 contig_1 cds 1864366 1868190 - GCA000560365_01785 ftsK FtsK domain-containing protein COG:COG1674, COG:D, RefSeq:WP_000118287.1, SO:0001217, UniParc:UPI0000696C68, UniRef:UniRef100_A0A1S5ZD33, UniRef:UniRef50_A0A151A4B2, UniRef:UniRef90_Q2FXI9 contig_1 cds 1868211 1868807 - GCA000560365_01786 ytpR YtpR family tRNA-binding protein COG:COG0073, COG:J, RefSeq:WP_001048368.1, SO:0001217, UniParc:UPI0000054386, UniRef:UniRef100_Q2FXI8, UniRef:UniRef50_O34943, UniRef:UniRef90_A0A2S6DGF7 contig_1 cds 1868836 1869693 - GCA000560365_01787 ytpQ UPF0354 protein SA1564 COG:COG4848, COG:R, RefSeq:WP_001091387.1, SO:0001217, UniParc:UPI00000CAE0C, UniRef:UniRef100_Q2FXI7, UniRef:UniRef50_Q2FXI7, UniRef:UniRef90_Q2FXI7 contig_1 cds 1869793 1870104 - GCA000560365_01788 cnoX Thioredoxin domain-containing protein COG:COG3118, COG:O, RefSeq:WP_000811163.1, SO:0001217, UniParc:UPI0000054384, UniRef:UniRef100_Q2FXI6, UniRef:UniRef50_A0A380G846, UniRef:UniRef90_Q2FXI6 contig_1 cds 1870169 1871245 - GCA000560365_01789 frvX Glutamyl aminopeptidase Deblocking aminopeptidase COG:COG1363, COG:EG, RefSeq:WP_001024576.1, SO:0001217, UniParc:UPI00000CA9CB, UniRef:UniRef100_Q2FXI5, UniRef:UniRef50_A0A0D1GA35, UniRef:UniRef90_A0A0D1GA35 contig_1 cds 1871329 1871643 + GCA000560365_01790 PepSY domain-containing protein COG:COG5584, COG:S, SO:0001217, UniParc:UPI00006E3DDC, UniRef:UniRef100_Q2FXI4, UniRef:UniRef50_Q2FXI4, UniRef:UniRef90_Q2FXI4 contig_1 cds 1871768 1872610 - GCA000560365_01791 gloB Metal-dependent hydrolase COG:COG0491, COG:R, RefSeq:WP_000689580.1, SO:0001217, UniParc:UPI0000696C69, UniRef:UniRef100_Q2FXI3, UniRef:UniRef50_A0A077US04, UniRef:UniRef90_A0A077US04 contig_1 ncRNA 1872877 1872935 + GCA000560365_01792 sau-5949 Staphylococcus sRNA sau-5949 RFAM:RF02396, SO:0000655 contig_1 cds 1873080 1873724 - GCA000560365_01793 trmB tRNA (guanosine(46)-N7)-methyltransferase TrmB COG:COG0220, COG:J, EC:2.1.1.33, GO:0006400, GO:0008176, GO:0043527, RefSeq:WP_001266157.1, SO:0001217, UniParc:UPI000005437E, UniRef:UniRef100_Q2FXI2, UniRef:UniRef50_Q2FXI2, UniRef:UniRef90_Q2FXI2 contig_1 cds 1873739 1874530 - GCA000560365_01794 cotS Aminoglycoside phosphotransferase domain-containing protein COG:COG0510, COG:H, RefSeq:WP_000434765.1, SO:0001217, UniParc:UPI00000CAA0E, UniRef:UniRef100_A0A7Z7R097, UniRef:UniRef50_I3ECD2, UniRef:UniRef90_Q2FXI1 contig_1 cds 1875080 1875928 - GCA000560365_01795 dat D-amino-acid transaminase COG:COG0115, COG:EH, EC:2.6.1.21, GO:0005829, GO:0019478, GO:0019480, GO:0030170, GO:0046416, GO:0046437, GO:0047810, KEGG:K00824, RefSeq:WP_000411085.1, SO:0001217, UniParc:UPI000005437C, UniRef:UniRef100_Q5HF24, UniRef:UniRef50_Q5HNG0, UniRef:UniRef90_P63511 contig_1 cds 1875932 1877341 - GCA000560365_01796 sapep Mn(2+)-dependent dipeptidase Sapep BlastRules:WP_000265417, COG:COG0624, COG:E, EC:3.4.13.-, GO:0006508, GO:0006526, GO:0008237, GO:0008270, GO:0008777, GO:0016805, RefSeq:WP_000265417.1, SO:0001217, UniParc:UPI000005437B, UniRef:UniRef100_Q2FXH9, UniRef:UniRef50_Q2FXH9, UniRef:UniRef90_Q2FXH9 contig_1 cds 1878091 1878513 - GCA000560365_01797 ytxH YtxH domain-containing protein RefSeq:WP_001051860.1, SO:0001217, UniParc:UPI000005437A, UniRef:UniRef100_Q2FXH8, UniRef:UniRef50_A0A1J3ZYN5, UniRef:UniRef90_Q2FXH8 contig_1 cds 1878530 1879225 - GCA000560365_01798 rsuA Pseudouridine synthase COG:COG1187, COG:J, RefSeq:WP_001217125.1, SO:0001217, UniParc:UPI0000054379, UniRef:UniRef100_Q2FXH7, UniRef:UniRef50_A0A2S6D0E1, UniRef:UniRef90_A0A2S6D0E1 contig_1 cds 1879222 1880883 - GCA000560365_01799 spoVB Polysaccharide biosynthesis protein COG:COG5841, COG:D, RefSeq:WP_000004335.1, SO:0001217, UniParc:UPI0000054377, UniRef:UniRef100_Q2FXH6, UniRef:UniRef50_B9E7H2, UniRef:UniRef90_A0A2K4AFH1 contig_1 cds 1881290 1882558 + GCA000560365_01800 yhiN Aminoacetone oxidase family FAD-binding enzyme COG:COG2081, COG:R, RefSeq:WP_000285014.1, SO:0001217, UniParc:UPI0000696C6A, UniRef:UniRef100_A0A5A8VFU7, UniRef:UniRef50_A0A0U1MPZ9, UniRef:UniRef90_A0A0U1MPZ9 contig_1 cds 1882675 1889235 - GCA000560365_01801 sasC LPXTG-anchored repetitive surface protein SasC BlastRules:WP_001050546, COG:COG1196, COG:D, RefSeq:WP_001050548.1, SO:0001217, UniParc:UPI0000696C6B, UniRef:UniRef100_A0A2C9TN08, UniRef:UniRef50_C7BUR8, UniRef:UniRef90_C7BUR8 contig_1 cds 1889561 1889872 - GCA000560365_01802 pspE Rhodanese domain-containing protein COG:COG0607, COG:P, RefSeq:WP_000836465.1, SO:0001217, UniParc:UPI0000054374, UniRef:UniRef100_Q2FXH3, UniRef:UniRef50_A0A654B5B2, UniRef:UniRef90_Q2FXH3 contig_1 cds 1889894 1892311 - GCA000560365_01803 leuS leucine--tRNA ligase COG:COG0495, COG:J, EC:6.1.1.4, GO:0000166, GO:0002161, GO:0004823, GO:0005524, GO:0005829, GO:0006429, KEGG:K01869, RefSeq:WP_001549041.1, SO:0001217, UniParc:UPI00004B5C38, UniRef:UniRef100_Q2FXH2, UniRef:UniRef50_A8FGG0, UniRef:UniRef90_Q2FXH2 contig_1 cds 1892599 1893780 - GCA000560365_01804 araJ Major facilitator superfamily (MFS) profile domain-containing protein COG:COG2814, COG:G, RefSeq:WP_001025061.1, SO:0001217, UniParc:UPI0000054372, UniRef:UniRef100_Q2FXH1, UniRef:UniRef50_Q2FXH1, UniRef:UniRef90_Q2FXH1 contig_1 cds 1893890 1894843 + GCA000560365_01805 yhcC TIGR01212 family radical SAM protein COG:COG1242, COG:R, GO:0051536, GO:1904047, KEGG:K07139, RefSeq:WP_000526539.1, SO:0001217, UniParc:UPI0000054371, UniRef:UniRef100_Q2FXH0, UniRef:UniRef50_U1LL80, UniRef:UniRef90_Q2FXH0 contig_1 cds 1894840 1895403 + GCA000560365_01806 mnmM tRNA (mnm(5)s(2)U34)-methyltransferase COG:COG0275, COG:J, EC:2.1.1.61, GO:0008033, GO:0008168, GO:0032259, RefSeq:WP_000764419.1, SO:0001217, UniParc:UPI0000054370, UniRef:UniRef100_Q2FXG9, UniRef:UniRef50_Q2FXG9, UniRef:UniRef90_Q2FXG9 contig_1 cds 1895523 1895924 - GCA000560365_01807 rot HTH-type transcriptional regulator rot COG:COG1846, COG:K, GO:0003677, GO:0003700, GO:0006950, KEGG:K20338, RefSeq:WP_000757543.1, SO:0001217, UniParc:UPI000069AAE8, UniRef:UniRef100_Q9RFJ6, UniRef:UniRef50_Q9RFJ6, UniRef:UniRef90_Q9RFJ6 contig_1 cds 1896444 1896668 - GCA000560365_01808 Transposase SO:0001217, UniParc:UPI000069AAE9, UniRef:UniRef100_Q2FXG7, UniRef:UniRef50_Q2FXG7, UniRef:UniRef90_Q2FXG7 contig_1 cds 1896665 1897156 - GCA000560365_01809 insH Transposase InsH N-terminal domain-containing protein SO:0001217, UniParc:UPI000005436C, UniRef:UniRef100_Q2FXG6, UniRef:UniRef50_Q2FXG6, UniRef:UniRef90_Q2FXG6 contig_1 ncRNA 1897193 1897430 + GCA000560365_01810 tsr24 S. aureus tsr24 small RNA RFAM:RF02577, SO:0000655 contig_1 cds 1897503 1898330 - GCA000560365_01811 pldB Serine aminopeptidase S33 domain-containing protein COG:COG2267, COG:I, RefSeq:WP_000266096.1, SO:0001217, UniParc:UPI000005436B, UniRef:UniRef100_Q2FXG5, UniRef:UniRef50_Q2FXG5, UniRef:UniRef90_Q2FXG5 contig_1 cds 1898564 1899565 + GCA000560365_01812 putA proline dehydrogenase COG:COG0506, COG:E, RefSeq:WP_001196354.1, SO:0001217, UniParc:UPI000005436A, UniRef:UniRef100_Q2FXG3, UniRef:UniRef50_A0A390ZXL9, UniRef:UniRef90_A0A390ZXL9 contig_1 cds 1899687 1900151 - GCA000560365_01813 ribE 6,7-dimethyl-8-ribityllumazine synthase COG:COG0054, COG:H, EC:2.5.1.78, GO:0000906, GO:0005829, GO:0009231, GO:0009349, KEGG:K00794, RefSeq:WP_001008551.1, SO:0001217, UniParc:UPI0000054369, UniRef:UniRef100_Q2FXG2, UniRef:UniRef50_O66529, UniRef:UniRef90_Q2FXG2 contig_1 cds 1900164 1901345 - GCA000560365_01814 ribBA Riboflavin biosynthesis protein RibBA COG:COG0807, COG:H, EC:3.5.4.25, EC:4.1.99.12, GO:0000287, GO:0003935, GO:0005525, GO:0005829, GO:0008270, GO:0008686, GO:0009231, GO:0030145, KEGG:K14652, RefSeq:WP_001159022.1, SO:0001217, UniParc:UPI00000522A4, UniRef:UniRef100_Q5HF07, UniRef:UniRef50_Q4L7B1, UniRef:UniRef90_Q99TA0 contig_1 cds 1901356 1901988 - GCA000560365_01815 ribC riboflavin synthase COG:COG0307, COG:H, EC:2.5.1.9, KEGG:K00793, RefSeq:WP_000493892.1, SO:0001217, UniParc:UPI0000054367, UniRef:UniRef100_Q2FXG0, UniRef:UniRef50_B9DN31, UniRef:UniRef90_A0A0U1MNE7 contig_1 cds 1901995 1903026 - GCA000560365_01816 ribD bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD COG:COG1985, COG:H, EC:1.1.1.193, EC:3.5.4.26, GO:0008703, GO:0008835, KEGG:K11752, SO:0001217, UniParc:UPI0000054366, UniRef:UniRef100_A0A2G4VG13, UniRef:UniRef50_A0A2G4VG13, UniRef:UniRef90_A0A2G4VG13 contig_1 ncRNA-region 1903165 1903300 - FMN riboswitch aptamer (RFN element) RFAM:RF00050, SO:0000035 contig_1 cds 1903519 1905021 - GCA000560365_01817 ydhS FAD-dependent urate hydroxylase HpyO/Asp monooxygenase CreE-like FAD/NAD(P)-binding domain-containing protein COG:COG4529, COG:R, RefSeq:WP_001261677.1, SO:0001217, UniParc:UPI00004B5C3B, UniRef:UniRef100_A0A0E7MG06, UniRef:UniRef50_S2XMM3, UniRef:UniRef90_Q2FXF8 contig_1 cds 1905544 1905858 + GCA000560365_01818 Arsenate operon regulator RefSeq:WP_000221179.1, SO:0001217, UniParc:UPI00000BF2AB, UniRef:UniRef100_Q2FXF7, UniRef:UniRef50_P30338, UniRef:UniRef90_Q2FXF7 contig_1 cds 1905858 1907150 + GCA000560365_01819 arsB arsenite efflux transporter membrane subunit ArsB COG:COG1055, COG:P, GO:0005886, GO:0015105, GO:0015700, GO:0016020, GO:0046685, KEGG:K03893, NCBIFam:NF033877.0, RefSeq:WP_000989121.1, SO:0001217, UniParc:UPI00000CAAD7, UniRef:UniRef100_Q5HF02, UniRef:UniRef50_Q5HF02, UniRef:UniRef90_Q5HF02 contig_1 cds 1907168 1907563 + GCA000560365_01820 arsC arsenate reductase (thioredoxin) EC:1.20.4.4, GO:0004725, GO:0005737, GO:0030612, GO:0046685, KEGG:K03741, RefSeq:WP_000163235.1, SO:0001217, UniParc:UPI0000054361, UniRef:UniRef100_Q2FXF5, UniRef:UniRef50_Q2FXF5, UniRef:UniRef90_Q2FXF5 contig_1 cds 1907858 1908712 - GCA000560365_01821 lytD Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain-containing protein COG:COG4193, COG:G, RefSeq:WP_001032833.1, SO:0001217, UniParc:UPI00000BF2A9, UniRef:UniRef100_Q2FXF4, UniRef:UniRef50_Q2FXF4, UniRef:UniRef90_Q2FXF4 contig_1 cds 1908988 1909212 - GCA000560365_01822 Staphylococcal protein RefSeq:WP_000384171.1, SO:0001217, UniParc:UPI000005435F, UniRef:UniRef100_Q2FXF3, UniRef:UniRef50_Q2FXF3, UniRef:UniRef90_Q2FXF3 contig_1 cds 1909411 1909881 + GCA000560365_01823 sigS RNA polymerase sigma factor SigS BlastRules:WP_000671063, COG:COG1595, COG:K, GO:0003677, GO:0006352, GO:0016987, RefSeq:WP_000671052.1, SO:0001217, UniParc:UPI00000D9EA7, UniRef:UniRef100_Q2FFW3, UniRef:UniRef50_Q2FXF2, UniRef:UniRef90_Q2FXF2 contig_1 cds 1909994 1910437 + GCA000560365_01824 comK Competence protein ComK RefSeq:WP_001153742.1, SO:0001217, UniParc:UPI00000D78AD, UniRef:UniRef100_Q2FXF1, UniRef:UniRef50_Q2FXF1, UniRef:UniRef90_Q2FXF1 contig_1 cds 1910424 1910867 - GCA000560365_01825 Staphylococcal protein RefSeq:WP_001030465.1, SO:0001217, UniParc:UPI000005435C, UniRef:UniRef100_Q2FXF0, UniRef:UniRef50_Q2FXF0, UniRef:UniRef90_Q2FXF0 contig_1 cds 1911163 1911798 + GCA000560365_01826 sdpA CPBP family intramembrane metalloprotease SdpA BlastRules:WP_001168904, COG:COG1266, COG:O, RefSeq:WP_001168904.1, SO:0001217, UniParc:UPI000005435B, UniRef:UniRef100_Q2FXE9, UniRef:UniRef50_Q2FXE9, UniRef:UniRef90_Q2FXE9 contig_1 cds 1912238 1912951 - GCA000560365_01827 talA transaldolase COG:COG0176, COG:G, EC:2.2.1.2, GO:0004801, GO:0006098, RefSeq:WP_001096459.1, SO:0001217, UniParc:UPI0000696C70, UniRef:UniRef100_A0A5A8VMD0, UniRef:UniRef50_A0A0D0SMT5, UniRef:UniRef90_A0A0D0SMT5 contig_1 cds 1913211 1913513 + GCA000560365_01828 Membrane protein RefSeq:WP_000091445.1, SO:0001217, UniParc:UPI0000054357, UniRef:UniRef100_A0AA43V2N0, UniRef:UniRef50_Q5HND2, UniRef:UniRef90_A0A389U3H2 contig_1 cds 1913769 1914134 + GCA000560365_01829 crcB fluoride efflux transporter CrcB COG:COG0239, COG:DP, GO:0005886, GO:0046872, GO:0062054, GO:0140114, RefSeq:WP_001200541.1, SO:0001217, UniParc:UPI0001EFF14E, UniRef:UniRef100_A0A1S6D053, UniRef:UniRef50_Q2FXE6, UniRef:UniRef90_Q2FXE6 contig_1 cds 1914131 1914484 + GCA000560365_01830 fluC Fluoride-specific ion channel FluC COG:COG0239, COG:DP, GO:0005886, GO:0046872, GO:0062054, GO:0140114, RefSeq:WP_000623471.1, SO:0001217, UniParc:UPI00005FE5C6, UniRef:UniRef100_Q2FXE5, UniRef:UniRef50_Q2FXE5, UniRef:UniRef90_Q2FXE5 contig_1 ncRNA 1914724 1914944 - GCA000560365_01831 tsr24 S. aureus tsr24 small RNA RFAM:RF02577, SO:0000655 contig_1 cds 1915039 1915863 + GCA000560365_01832 tnp IS1182 family transposase GO:0004803, KEGG:K07487, SO:0001217, UniParc:UPI0000054354, UniRef:UniRef100_Q2FXE4, UniRef:UniRef50_A0A9P2Z0V2, UniRef:UniRef90_Q2FW68 contig_1 cds 1915896 1916504 + GCA000560365_01833 tnp IS1182 family transposase GO:0004803, KEGG:K07487, SO:0001217, UniParc:UPI0001574469, UniRef:UniRef100_A0A2X2KKF7, UniRef:UniRef50_A0A9P2Z0V2, UniRef:UniRef90_Q2FW68 contig_1 cds 1916567 1917400 - GCA000560365_01834 aRA1 Aldo/keto reductase family protein COG:COG0656, COG:Q, RefSeq:WP_000453320.1, SO:0001217, UniParc:UPI0000054352, UniRef:UniRef100_Q2FXE2, UniRef:UniRef50_B9DN15, UniRef:UniRef90_A0A0H2J452 contig_1 cds 1917612 1918520 - GCA000560365_01835 NERD domain-containing protein RefSeq:WP_000366154.1, SO:0001217, UniParc:UPI00004B5C3D, UniRef:UniRef100_Q2G1W5, UniRef:UniRef50_Q2G1W5, UniRef:UniRef90_Q2G1W5 contig_1 cds 1918645 1919838 - GCA000560365_01836 metK methionine adenosyltransferase COG:COG0192, COG:H, EC:2.5.1.6, GO:0000287, GO:0004478, GO:0005524, GO:0005737, GO:0006556, GO:0006730, KEGG:K00789, RefSeq:WP_000933822.1, SO:0001217, UniParc:UPI0000054350, UniRef:UniRef100_Q2G1W4, UniRef:UniRef50_P72871, UniRef:UniRef90_Q2G1W4 contig_1 ncRNA-region 1919944 1920054 - SAM riboswitch aptamer (S box leader) RFAM:RF00162, SO:0000140 contig_1 cds 1920209 1921801 + GCA000560365_01837 pckA phosphoenolpyruvate carboxykinase (ATP) COG:C, COG:COG1866, EC:4.1.1.49, GO:0004612, GO:0005524, GO:0005829, GO:0006094, GO:0046872, KEGG:K01610, RefSeq:WP_000109906.1, SO:0001217, UniParc:UPI000013203A, UniRef:UniRef100_Q2G1W2, UniRef:UniRef50_Q2G1W2, UniRef:UniRef90_Q2G1W2 contig_1 cds 1921937 1922299 - GCA000560365_01838 tnpA IS200/IS605 family transposase GO:0004803, SO:0001217, UniRef:UniRef50_G1UWV3, UniRef:UniRef90_UPI00378F43D1 contig_1 cds 1922797 1923567 - GCA000560365_01839 dAP2 Peptidase S9 prolyl oligopeptidase catalytic domain-containing protein COG:COG1506, COG:E, SO:0001217, UniParc:UPI00004B5C3E, UniRef:UniRef100_Q2G2V6, UniRef:UniRef50_Q2G2V6, UniRef:UniRef90_Q2G2V6 contig_1 cds 1923548 1924027 - GCA000560365_01840 ytkD RNA deprotection pyrophosphohydrolase COG:COG1051, COG:F, GO:0006139, GO:0017111, SO:0001217, UniParc:UPI000005434B, UniRef:UniRef100_X5E2B2, UniRef:UniRef50_A0A0D6XNS6, UniRef:UniRef90_Q2G2V5 contig_1 cds 1924087 1924344 + GCA000560365_01841 yidD membrane protein insertion efficiency factor YidD COG:COG0759, COG:M, GO:0005886, KEGG:K08998, RefSeq:WP_000718107.1, SO:0001217, UniParc:UPI000013B193, UniRef:UniRef100_Q2G2V4, UniRef:UniRef50_Q2G2V4, UniRef:UniRef90_Q2G2V4 contig_1 cds 1924341 1925342 - GCA000560365_01842 menC o-succinylbenzoate synthase COG:COG4948, COG:MR, EC:4.2.1.113, GO:0000287, GO:0009234, GO:0016829, GO:0043748, RefSeq:WP_000778523.1, SO:0001217, UniParc:UPI00000AFD5F, UniRef:UniRef100_A0A0H2WWB5, UniRef:UniRef50_A0A0H2WWB5, UniRef:UniRef90_A0A0H2WWB5 contig_1 cds 1925347 1926825 - GCA000560365_01843 menE o-succinylbenzoate--CoA ligase COG:COG0318, COG:I, EC:6.2.1.26, GO:0005524, GO:0008756, GO:0009234, RefSeq:WP_000348360.1, SO:0001217, UniParc:UPI0000054348, UniRef:UniRef100_Q2G2V3, UniRef:UniRef50_Q2G2V3, UniRef:UniRef90_Q2G2V3 contig_1 cds 1926984 1927466 - GCA000560365_01844 DUF4909 domain-containing protein SO:0001217, UniParc:UPI00004B5C3F, UniRef:UniRef100_Q2G2Y6, UniRef:UniRef50_Q2G2Y6, UniRef:UniRef90_Q2G2Y6 contig_1 cds 1927778 1928392 + GCA000560365_01845 Endonuclease RefSeq:WP_001091080.1, SO:0001217, UniParc:UPI0001698992, UniRef:UniRef100_A0A0D6HG31, UniRef:UniRef50_A0A380E5B9, UniRef:UniRef90_A0A380E5B9 contig_1 cds 1928473 1929468 + GCA000560365_01846 DUF4352 domain-containing protein RefSeq:WP_000070653.1, SO:0001217, UniParc:UPI00004B5C40, UniRef:UniRef100_Q2G2Y3, UniRef:UniRef50_Q2G2Y3, UniRef:UniRef90_Q2G2Y3 contig_1 cds 1929544 1929699 + GCA000560365_01847 Lipoprotein SO:0001217, UniParc:UPI0000696C74, UniRef:UniRef100_Q2G2Y5, UniRef:UniRef50_Q2G2Y5, UniRef:UniRef90_Q2G2Y5 contig_1 cds 1929700 1930170 + GCA000560365_01848 Lipoprotein SO:0001217, UniParc:UPI0000696C75, UniRef:UniRef100_Q2G2Y5, UniRef:UniRef50_Q2G2Y5, UniRef:UniRef90_Q2G2Y5 contig_1 cds 1930211 1930555 + GCA000560365_01849 DUF3969 domain-containing protein RefSeq:WP_000627551.1, SO:0001217, UniParc:UPI0000054342, UniRef:UniRef100_Q2G2Y2, UniRef:UniRef50_Q2G2Y2, UniRef:UniRef90_Q2G2Y2 contig_1 cds 1930653 1931204 + GCA000560365_01850 Phage protein RefSeq:WP_000414205.1, SO:0001217, UniParc:UPI00004B5C41, UniRef:UniRef100_Q2FXE1, UniRef:UniRef50_Q2FXE1, UniRef:UniRef90_Q2FXE1 contig_1 cds 1931422 1932063 - GCA000560365_01851 irrE IrrE N-terminal-like domain-containing protein RefSeq:WP_000494956.1, SO:0001217, UniParc:UPI0000054340, UniRef:UniRef100_Q2FXE0, UniRef:UniRef50_Q2FXE0, UniRef:UniRef90_Q2FXE0 contig_1 cds 1932364 1932540 - GCA000560365_01852 Mobilization protein RefSeq:WP_000375476.1, SO:0001217, UniParc:UPI000005433E, UniRef:UniRef100_Q2FXD8, UniRef:UniRef50_A0AAC9RPI6, UniRef:UniRef90_Q2FXD8 contig_1 cds 1932551 1932934 - GCA000560365_01853 Phage protein RefSeq:WP_000070811.1, SO:0001217, UniParc:UPI00000D9EB9, UniRef:UniRef100_A0A0E7TEX1, UniRef:UniRef50_A0A077UIW9, UniRef:UniRef90_A0A077UIW9 contig_1 cds 1933538 1933681 - GCA000560365_01854 Transposase family protein, putative RefSeq:WP_001549059.1, SO:0001217, UniParc:UPI000005433C, UniRef:UniRef100_Q2FXD5, UniRef:UniRef50_Q2FXD5, UniRef:UniRef90_Q2FXD5 contig_1 ncRNA 1933927 1934021 - GCA000560365_01855 fstAT Fst antitoxin sRNA RFAM:RF01797, SO:0000655 contig_1 cds 1934551 1934928 - GCA000560365_01856 DUF1433 domain-containing protein RefSeq:WP_001037045.1, SO:0001217, UniParc:UPI00000D9EBC, UniRef:UniRef100_A0A0D3Q8F3, UniRef:UniRef50_A0A2K4FCP2, UniRef:UniRef90_A0A5S9C6M7 contig_1 cds 1935449 1939561 - GCA000560365_01857 SMEK domain-containing protein RefSeq:WP_000831218.1, SO:0001217, UniParc:UPI00000D9EBD, UniRef:UniRef100_Q2FXD2, UniRef:UniRef50_Q2FXD2, UniRef:UniRef90_Q2FXD2 contig_1 cds 1940411 1941610 - GCA000560365_01858 Restriction endonuclease subunit S EC:3.1.21.3, KEGG:K01154, RefSeq:WP_000072576.1, SO:0001217, UniParc:UPI00004B5C45, UniRef:UniRef100_A0A2I7Y4B2, UniRef:UniRef50_A0A2I7Y4B2, UniRef:UniRef90_A0A2I7Y4B2 contig_1 cds 1941603 1943159 - GCA000560365_01859 type I restriction-modification system subunit M EC:2.1.1.72, GO:0003677, GO:0009007, GO:0009307, KEGG:K03427, RefSeq:WP_000028659.1, SO:0001217, UniParc:UPI00004B5C46, UniRef:UniRef100_A0A6H4EPT3, UniRef:UniRef50_A0A6H4EPT3, UniRef:UniRef90_A0A6H4EPT3 contig_1 cds 1943522 1944241 - GCA000560365_01860 splF serine protease SplF BlastRules:WP_001038688, COG:COG3591, COG:O, EC:3.4.21.-, GO:0005576, GO:0006508, GO:0008236, RefSeq:WP_001038688.1, SO:0001217, UniParc:UPI0000046F04, UniRef:UniRef100_Q2FXC8, UniRef:UniRef50_Q2FXC3, UniRef:UniRef90_Q2FXC8 contig_1 cds 1944392 1945108 - GCA000560365_01861 splE serine protease SplE BlastRules:WP_001038759, EC:3.4.21.-, GO:0004252, GO:0005576, GO:0006508, NCBIProtein:ABD30999.1, RefSeq:WP_001038759.1, SO:0001217, UniParc:UPI0000054336, UniRef:UniRef100_Q2FXC7, UniRef:UniRef50_Q2FXC3, UniRef:UniRef90_Q2FXC7 contig_1 cds 1945266 1945985 - GCA000560365_01862 splD serine protease SplD BlastRules:WP_001038704, COG:COG3591, COG:O, EC:3.4.21.-, GO:0005576, GO:0006508, GO:0008236, RefSeq:WP_001038704.1, SO:0001217, UniParc:UPI00000CAA66, UniRef:UniRef100_Q2FXC5, UniRef:UniRef50_Q2FXC3, UniRef:UniRef90_Q2FXC8 contig_1 cds 1946106 1946825 - GCA000560365_01863 splC serine protease SplC BlastRules:WP_001038867, COG:COG3591, COG:O, EC:3.4.21.-, GO:0004252, GO:0005576, GO:0006508, RefSeq:WP_001038867.1, SO:0001217, UniParc:UPI00000B4E0D, UniRef:UniRef100_Q2FXC4, UniRef:UniRef50_Q2FXC3, UniRef:UniRef90_Q2FXC4 contig_1 cds 1946883 1947605 - GCA000560365_01864 splB serine protease SplB BlastRules:WP_001039447, COG:COG3591, COG:O, EC:3.4.21.-, GO:0004252, GO:0005576, GO:0006508, NCBIProtein:ABD31003.1, RefSeq:WP_001039447.1, SO:0001217, UniParc:UPI00000B64E2, UniRef:UniRef100_Q2FXC3, UniRef:UniRef50_Q2FXC3, UniRef:UniRef90_Q2FXC3 contig_1 cds 1947730 1948437 - GCA000560365_01865 splA serine protease SplA BlastRules:WP_001039435, COG:COG3591, COG:O, EC:3.4.21.-, GO:0004252, GO:0005576, GO:0006508, NCBIProtein:ABD31004.1, RefSeq:WP_001039435.1, SO:0001217, UniParc:UPI0000054332, UniRef:UniRef100_Q2FXC2, UniRef:UniRef50_Q2FXC2, UniRef:UniRef90_Q2FXC2 contig_1 cds 1949402 1949968 + GCA000560365_01866 DUF4888 domain-containing protein RefSeq:WP_001092763.1, SO:0001217, UniParc:UPI0000054331, UniRef:UniRef100_Q2FXC0, UniRef:UniRef50_Q2FXC0, UniRef:UniRef90_Q2FXC0 contig_1 cds 1950442 1951140 - GCA000560365_01867 Lantibiotic ABC transporter protein KEGG:K20494, RefSeq:WP_000586140.1, SO:0001217, UniParc:UPI00000D9EC4, UniRef:UniRef100_Q2FXB9, UniRef:UniRef50_A0A6G4N7X5, UniRef:UniRef90_A0A6G4N7X5 contig_1 cds 1951137 1951898 - GCA000560365_01868 Membrane protein, putative KEGG:K20491, RefSeq:WP_000581552.1, SO:0001217, UniParc:UPI000005432F, UniRef:UniRef100_Q2FXB8, UniRef:UniRef50_A3QNN9, UniRef:UniRef90_Q2FXB8 contig_1 cds 1951895 1952587 - GCA000560365_01869 Lantibiotic immunity protein F RefSeq:WP_001096791.1, SO:0001217, UniParc:UPI00000D9EC5, UniRef:UniRef100_Q2FXB7, UniRef:UniRef50_A0A1S8TBK5, UniRef:UniRef90_A0A0H3K976 contig_1 cds 1952610 1953983 - GCA000560365_01870 Leader peptide-processing serine protease RefSeq:WP_031808151.1, SO:0001217, UniParc:UPI00045084E8, UniRef:UniRef100_UPI00045084E8, UniRef:UniRef50_A0A077UKA7, UniRef:UniRef90_Q2FXB6 contig_1 cds 1953993 1954511 - GCA000560365_01871 Lantibiotic modifying enzyme RefSeq:WP_000504439.1, SO:0001217, UniParc:UPI00000D9EC6, UniRef:UniRef100_Q2FXB5, UniRef:UniRef50_P30197, UniRef:UniRef90_A0A077UK13 contig_1 cds 1954527 1955771 - GCA000560365_01872 Lanthionine synthetase C-like family protein EC:3.13.2.4, KEGG:K20484, RefSeq:WP_000566596.1, SO:0001217, UniParc:UPI00000D9EC7, UniRef:UniRef100_Q2FXB4, UniRef:UniRef50_A0A077UKI6, UniRef:UniRef90_A0A380ELY0 contig_1 cds 1955764 1958757 - GCA000560365_01873 epiB Epidermin biosynthesis protein epiB EC:3.13.2.4, KEGG:K20483, RefSeq:WP_001092605.1, SO:0001217, UniParc:UPI0000696C78, UniRef:UniRef100_Q2FXB3, UniRef:UniRef50_A0A8G2HW37, UniRef:UniRef90_A0A8G2HW37 contig_1 cds 1958822 1958965 - GCA000560365_01874 Lantibiotic RefSeq:WP_000416756.1, SO:0001217, UniParc:UPI0000054328, UniRef:UniRef100_Q2FXB2, UniRef:UniRef50_I6XG59, UniRef:UniRef90_A0A7U7PYR9 contig_1 cds 1960087 1961070 - GCA000560365_01875 lukD bi-component leukocidin LukED subunit D BlastRules:WP_088621910, GO:0005576, GO:0051715, GO:0090729, NCBIProtein:CAA73668.1, RefSeq:WP_000782464.1, SO:0001217, UniParc:UPI00000522A5, UniRef:UniRef100_Q2FXB1, UniRef:UniRef50_Q2FVK1, UniRef:UniRef90_O54082 contig_1 cds 1961072 1962007 - GCA000560365_01876 lukE bi-component leukocidin LukED subunit E BlastRules:WP_088621909, BlastRules:WP_114304764, GO:0005576, GO:0051715, GO:0090729, NCBIProtein:RCV70079.1, RefSeq:WP_000473596.1, SO:0001217, UniParc:UPI00000D7779, UniRef:UniRef100_Q2FXB0, UniRef:UniRef50_O54081, UniRef:UniRef90_O54081 contig_1 ncRNA 1962515 1962664 - GCA000560365_01877 sprC Small pathogenicity island RNA C (srn_3610) RFAM:RF02890, SO:0000655 contig_1 cds 1962890 1963345 + GCA000560365_01878 DUF6978 domain-containing protein RefSeq:WP_001086053.1, SO:0001217, UniParc:UPI0000696C79, UniRef:UniRef100_A0A5A8VDQ0, UniRef:UniRef50_Q2FXA9, UniRef:UniRef90_Q2FXA9 contig_1 cds 1963358 1963999 + GCA000560365_01879 DUF1828 domain-containing protein SO:0001217, UniParc:UPI0000696C7A, UniRef:UniRef100_Q2FXA8, UniRef:UniRef50_Q2FXA8, UniRef:UniRef90_Q2FXA8 contig_1 tRNA 1965388 1965476 - GCA000560365_01880 trnS tRNA-Ser(gga) SO:0000269 contig_1 tRNA 1965531 1965602 - GCA000560365_01881 trnE tRNA-Glu(ttc) SO:0000259 contig_1 tRNA 1965604 1965678 - GCA000560365_01882 trnN tRNA-Asn(gtt) SO:0000257 contig_1 tRNA 1965693 1965766 - GCA000560365_01883 trnG tRNA-Gly(tcc) SO:0000260 contig_1 tRNA 1965782 1965857 - GCA000560365_01884 trnH tRNA-His(gtg) SO:0000262 contig_1 tRNA 1965871 1965943 - GCA000560365_01885 trnF tRNA-Phe(gaa) SO:0000267 contig_1 tRNA 1965960 1966035 - GCA000560365_01886 trnD tRNA-Asp(gtc) SO:0000256 contig_1 tRNA 1966057 1966130 - GCA000560365_01887 trnfM tRNA-fMet(cat) SO:0000266 contig_1 ncRNA 1966111 1966205 - GCA000560365_01888 S774 Staphylococcus sRNA 774 RFAM:RF02896, SO:0000655 contig_1 cds 1966602 1967156 - GCA000560365_01889 ydeN Serine hydrolase family protein COG:COG3545, COG:R, RefSeq:WP_000132890.1, SO:0001217, UniParc:UPI00000D7833, UniRef:UniRef100_A0A0H3KHA1, UniRef:UniRef50_Q2FXA7, UniRef:UniRef90_Q2FXA7 contig_1 cds 1967479 1968879 - GCA000560365_01890 hemY protoporphyrinogen oxidase COG:COG1232, COG:H, EC:1.3.3.15, EC:1.3.3.4, GO:0004729, GO:0005737, GO:0006779, GO:0006783, GO:0016491, RefSeq:WP_000167538.1, SO:0001217, UniParc:UPI00004B5C4D, UniRef:UniRef100_Q2FXA5, UniRef:UniRef50_Q2FXA5, UniRef:UniRef90_Q2FXA5 contig_1 cds 1968903 1969826 - GCA000560365_01891 hemH ferrochelatase COG:COG0276, COG:H, EC:4.98.1.1, EC:4.99.1.9, GO:0004325, GO:0005737, GO:0006779, GO:0006783, GO:0046872, KEGG:K01772, RefSeq:WP_000162881.1, SO:0001217, UniParc:UPI000012C5EF, UniRef:UniRef100_Q5HEU3, UniRef:UniRef50_P32396, UniRef:UniRef90_Q2FXA4 contig_1 cds 1969884 1970921 - GCA000560365_01892 hemE uroporphyrinogen decarboxylase COG:COG0407, COG:H, EC:4.1.1.37, GO:0004853, GO:0005829, GO:0006779, GO:0006782, KEGG:K01599, RefSeq:WP_000233526.1, SO:0001217, UniParc:UPI0000054321, UniRef:UniRef100_Q2FXA3, UniRef:UniRef50_P32395, UniRef:UniRef90_Q2FXA3 contig_1 cds 1971184 1971687 + GCA000560365_01893 traP signal transduction protein TRAP BlastRules:WP_000737976, BlastRules:WP_001829811, GO:0016020, RefSeq:WP_000737976.1, SO:0001217, UniParc:UPI0000049A4E, UniRef:UniRef100_Q2G2F3, UniRef:UniRef50_Q2G2F3, UniRef:UniRef90_Q2G2F3 contig_1 cds 1971811 1973034 - GCA000560365_01894 ecsB ABC transporter permease EcsB COG:COG4473, COG:U, KEGG:K25157, RefSeq:WP_001245769.1, SO:0001217, UniParc:UPI00004B5C4E, UniRef:UniRef100_Q2G2F2, UniRef:UniRef50_Q2G2F2, UniRef:UniRef90_Q2G2F2 contig_1 cds 1973027 1973767 - GCA000560365_01895 rbbA ABC transporter ATP-binding protein COG:COG1131, COG:JV, RefSeq:WP_000216878.1, SO:0001217, UniParc:UPI00004B5C4F, UniRef:UniRef100_Q2G2F1, UniRef:UniRef50_A0A0M9FN87, UniRef:UniRef90_A0A8G2HXZ9 contig_1 cds 1973901 1974323 + GCA000560365_01896 hinT HIT domain-containing protein COG:COG0537, COG:FR, RefSeq:WP_000004981.1, SO:0001217, UniParc:UPI00000D76E8, UniRef:UniRef100_Q2G2F0, UniRef:UniRef50_A0A1D2KB85, UniRef:UniRef90_Q2G2F0 contig_1 cds 1974465 1974830 + GCA000560365_01897 gvpP YtxH domain-containing protein COG:COG4980, COG:R, RefSeq:WP_000648118.1, SO:0001217, UniParc:UPI000005431B, UniRef:UniRef100_Q2G2T0, UniRef:UniRef50_A0A1S2MI30, UniRef:UniRef90_Q2G2T0 contig_1 cds 1975563 1976120 + GCA000560365_01898 DUF3267 domain-containing protein RefSeq:WP_000477959.1, SO:0001217, UniParc:UPI000005431A, UniRef:UniRef100_Q2G2S9, UniRef:UniRef50_Q2G2S9, UniRef:UniRef90_Q2G2S9 contig_1 cds 1976325 1977287 + GCA000560365_01899 prsA Foldase protein PrsA COG:COG0760, COG:O, EC:5.2.1.8, GO:0005886, GO:0006457, GO:0140839, GO:0140840, RefSeq:WP_000782121.1, SO:0001217, UniParc:UPI000005229F, UniRef:UniRef100_Q2G2S6, UniRef:UniRef50_Q2G2S6, UniRef:UniRef90_Q2G2S6 contig_1 cds 1977408 1978349 - GCA000560365_01900 yhaM 3'-5' exoribonuclease YhaM COG:COG3481, COG:J, EC:3.1.-.-, KEGG:K03698, RefSeq:WP_001244175.1, SO:0001217, UniParc:UPI0000052249, UniRef:UniRef100_Q2G2T1, UniRef:UniRef50_Q9KDN6, UniRef:UniRef90_Q2G2T1 contig_1 cds 1978346 1981282 - GCA000560365_01901 yhaN putative protein YhaN AAA domain-containing protein COG:COG4717, COG:S, RefSeq:WP_000584648.1, SO:0001217, UniParc:UPI00004B5C50, UniRef:UniRef100_Q2G2S8, UniRef:UniRef50_B9DMY3, UniRef:UniRef90_Q2G2S8 contig_1 cds 1981272 1982468 - GCA000560365_01902 sbcD Calcineurin-like phosphoesterase domain-containing protein COG:COG0420, COG:L, RefSeq:WP_000238227.1, SO:0001217, UniParc:UPI0000054317, UniRef:UniRef100_Q2G2S7, UniRef:UniRef50_Q2G2S7, UniRef:UniRef90_Q2G2S7 contig_1 cds 1983240 1983584 - GCA000560365_01903 ylbF YlbF/YmcA family competence regulator COG:COG3679, COG:T, RefSeq:WP_000290301.1, SO:0001217, UniParc:UPI0000054315, UniRef:UniRef100_Q2FXA0, UniRef:UniRef50_Q2FXA0, UniRef:UniRef90_Q2FXA0 contig_1 cds 1983653 1984777 - GCA000560365_01904 yheB UPF0754 membrane protein SAOUHSC_01978 COG:COG4399, COG:S, GO:0005886, RefSeq:WP_000992527.1, SO:0001217, UniParc:UPI00004B5C51, UniRef:UniRef100_Q2FX99, UniRef:UniRef50_Q2FX99, UniRef:UniRef90_Q2FX99 contig_1 cds 1984956 1985420 - GCA000560365_01905 xRE HTH cro/C1-type domain-containing protein COG:COG1476, COG:K, RefSeq:WP_000375864.1, SO:0001217, UniParc:UPI00000D780E, UniRef:UniRef100_Q2FX98, UniRef:UniRef50_Q2FX98, UniRef:UniRef90_Q2FX98 contig_1 cds 1985776 1986399 - GCA000560365_01906 citB DNA-binding response regulator COG:COG2197, COG:TK, RefSeq:WP_001045133.1, SO:0001217, UniParc:UPI0000054A4B, UniRef:UniRef100_Q2FX97, UniRef:UniRef50_S2XG46, UniRef:UniRef90_A0A2W2R098 contig_1 cds 1986421 1987533 - GCA000560365_01907 comP histidine kinase COG:COG4585, COG:T, RefSeq:WP_000437967.1, SO:0001217, UniParc:UPI00003B17C9, UniRef:UniRef100_Q2FX96, UniRef:UniRef50_A0A380G577, UniRef:UniRef90_A0A077UMX2 contig_1 cds 1987696 1988517 + GCA000560365_01908 rluA Pseudouridine synthase COG:COG0564, COG:J, RefSeq:WP_000669376.1, SO:0001217, UniParc:UPI0000054A55, UniRef:UniRef100_Q2FX95, UniRef:UniRef50_A0A239YUZ3, UniRef:UniRef90_A0A7U7PYN7 contig_1 cds 1988980 1990365 - GCA000560365_01909 fumC class II fumarate hydratase COG:C, COG:COG0114, EC:4.2.1.2, GO:0004333, GO:0005737, GO:0006099, GO:0006106, GO:0006108, GO:0045239, KEGG:K01679, RefSeq:WP_000116224.1, SO:0001217, UniParc:UPI0000054A68, UniRef:UniRef100_Q5HES4, UniRef:UniRef50_P64172, UniRef:UniRef90_P64172 contig_1 cds 1990561 1990956 - GCA000560365_01910 DUF2975 domain-containing protein RefSeq:WP_000901021.1, SO:0001217, UniParc:UPI00004B5C52, UniRef:UniRef100_Q2FX93, UniRef:UniRef50_Q2FX93, UniRef:UniRef90_Q2FX93 contig_1 cds 1991733 1991885 - GCA000560365_01911 SAS053 family DNA gyrase inhibitor GO:0090729, RefSeq:WP_000031108.1, SO:0001217, UniParc:UPI00000D7729, UniRef:UniRef100_Q2FX91, UniRef:UniRef50_Q2FX91, UniRef:UniRef90_Q2FX91 contig_1 cds 1991910 1992509 - GCA000560365_01912 nagB Glucosamine-6-phosphate isomerase COG:COG0363, COG:G, RefSeq:WP_001251224.1, SO:0001217, UniParc:UPI00000D77DC, UniRef:UniRef100_Q2FX90, UniRef:UniRef50_Q2FX90, UniRef:UniRef90_Q2FX90 contig_1 cds 1992668 1993138 - GCA000560365_01913 trmL tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL COG:COG0219, COG:J, EC:2.1.1.207, GO:0006400, GO:0008175, KEGG:K03216, RefSeq:WP_000181398.1, SO:0001217, UniParc:UPI0000054A9B, UniRef:UniRef100_Q2FX89, UniRef:UniRef50_A2RKW7, UniRef:UniRef90_Q2FX89 contig_1 cds 1993143 1994270 - GCA000560365_01914 queG tRNA epoxyqueuosine(34) reductase QueG COG:COG1600, COG:J, EC:1.17.99.6, GO:0005737, GO:0006400, GO:0008033, GO:0008616, GO:0046872, GO:0051539, GO:0052693, KEGG:K18979, RefSeq:WP_000379978.1, SO:0001217, UniParc:UPI00004B5C53, UniRef:UniRef100_A0A0D6HCX7, UniRef:UniRef50_P97030, UniRef:UniRef90_Q2FX88 contig_1 cds 1994421 1995149 - GCA000560365_01915 glnQ Glutamine transport ATP-binding protein glnQ COG:COG1126, COG:E, RefSeq:WP_001144055.1, SO:0001217, UniParc:UPI0000054AAF, UniRef:UniRef100_Q2FX87, UniRef:UniRef50_W0QFA6, UniRef:UniRef90_A0A2S6DLA3 contig_1 cds 1995136 1996593 - GCA000560365_01916 hisJ ABC transporter, permease protein, putative COG:COG0834, COG:ET, RefSeq:WP_000649907.1, SO:0001217, UniParc:UPI00000D9ED6, UniRef:UniRef100_Q2FX86, UniRef:UniRef50_A0A239YWZ0, UniRef:UniRef90_Q2FX86 contig_1 cds 1996851 1997912 - GCA000560365_01917 pfoR Phosphotransferase system EIIC domain-containing protein COG:COG3641, COG:T, KEGG:K07035, RefSeq:WP_000063582.1, SO:0001217, UniParc:UPI0000054B58, UniRef:UniRef100_Q2FX85, UniRef:UniRef50_B9DMY0, UniRef:UniRef90_A0A6B0D056 contig_1 ncRNA 1998339 1998396 - GCA000560365_01918 sau-5949 Staphylococcus sRNA sau-5949 RFAM:RF02396, SO:0000655 contig_1 cds 1998405 1999766 + GCA000560365_01919 tnp ISL3 family IS1181 transposase COG:COG3464, COG:X, GO:0004803, IS:IS1181, KEGG:K07485, SO:0001217, UniParc:UPI00015FD73D, UniRef:UniRef100_A0A1S6D7P4, UniRef:UniRef50_A0A380DS67, UniRef:UniRef90_A0A380DS67 contig_1 tRNA 1999859 1999942 - GCA000560365_01920 trnL tRNA-Leu(caa) SO:0000264 contig_1 tRNA 1999981 2000055 - GCA000560365_01921 trnG tRNA-Gly(tcc) SO:0000260 contig_1 tRNA 2000069 2000143 - GCA000560365_01922 trnG (pseudo) tRNA-Gly(tcc) SO:0000260 contig_1 tRNA 2000159 2000233 - GCA000560365_01923 trnG tRNA-Gly(tcc) SO:0000260 contig_1 tRNA 2000241 2000314 - GCA000560365_01924 trnC tRNA-Cys(gca) SO:0000258 contig_1 tRNA 2000320 2000391 - GCA000560365_01925 trnQ tRNA-Gln(ttg) SO:0000261 contig_1 tRNA 2000403 2000475 - GCA000560365_01926 trnH tRNA-His(gtg) SO:0000262 contig_1 tRNA 2000478 2000551 - GCA000560365_01927 trnW tRNA-Trp(cca) SO:0000271 contig_1 tRNA 2000567 2000647 - GCA000560365_01928 trnY tRNA-Tyr(gta) SO:0000272 contig_1 tRNA 2000653 2000728 - GCA000560365_01929 trnT tRNA-Thr(tgt) SO:0000270 contig_1 tRNA 2000736 2000808 - GCA000560365_01930 trnF tRNA-Phe(gaa) SO:0000267 contig_1 tRNA 2000827 2000902 - GCA000560365_01931 trnD tRNA-Asp(gtc) SO:0000256 contig_1 tRNA 2000912 2000985 - GCA000560365_01932 trnfM tRNA-fMet(cat) SO:0000266 contig_1 tRNA 2001000 2001092 - GCA000560365_01933 trnS tRNA-Ser(tga) SO:0000269 contig_1 tRNA 2001131 2001206 - GCA000560365_01934 trnD tRNA-Asp(gtc) SO:0000256 contig_1 tRNA 2001217 2001306 - GCA000560365_01935 trnS tRNA-Ser(tga) SO:0000269 contig_1 tRNA 2001316 2001389 - GCA000560365_01936 trnI tRNA-Ile2(cat) SO:0000263 contig_1 tRNA 2001418 2001491 - GCA000560365_01937 trnM tRNA-Met(cat) SO:0000266 contig_1 tRNA 2001513 2001588 - GCA000560365_01938 trnA tRNA-Ala(tgc) SO:0000254 contig_1 tRNA 2001606 2001679 - GCA000560365_01939 trnP tRNA-Pro(tgg) SO:0000268 contig_1 tRNA 2001689 2001762 - GCA000560365_01940 trnR tRNA-Arg(acg) SO:0001036 contig_1 tRNA 2001781 2001869 - GCA000560365_01941 trnL tRNA-Leu(taa) SO:0000264 contig_1 tRNA 2001880 2001954 - GCA000560365_01942 trnG tRNA-Gly(gcc) SO:0000260 contig_1 tRNA 2001958 2002039 - GCA000560365_01943 trnL tRNA-Leu(tag) SO:0000264 contig_1 tRNA 2002043 2002118 - GCA000560365_01944 trnK tRNA-Lys(ttt) SO:0000265 contig_1 tRNA 2002124 2002199 - GCA000560365_01945 trnT tRNA-Thr(tgt) SO:0000270 contig_1 tRNA 2002216 2002291 - GCA000560365_01946 trnV tRNA-Val(tac) SO:0000273 contig_1 rRNA 2002303 2002417 - GCA000560365_01947 rrf 5S ribosomal RNA GO:0003735, GO:0005840, KEGG:K01985, RFAM:RF00001, SO:0000652 contig_1 rRNA 2002490 2005412 - GCA000560365_01948 rrl 23S ribosomal RNA GO:0003735, GO:0005840, KEGG:K01980, RFAM:RF02541, SO:0001001 contig_1 tRNA 2005626 2005701 - GCA000560365_01949 trnA tRNA-Ala(tgc) SO:0000254 contig_1 tRNA 2005720 2005796 - GCA000560365_01950 trnI tRNA-Ile(gat) SO:0000263 contig_1 rRNA 2005888 2007439 - GCA000560365_01951 rrs 16S ribosomal RNA GO:0003735, GO:0005840, KEGG:K01977, RFAM:RF00177, SO:0001000 contig_1 cds 2008180 2008626 - GCA000560365_01952 perR peroxide-responsive transcriptional repressor PerR BlastRules:WP_000110011, BlastRules:WP_002858684, BlastRules:WP_002987920, BlastRules:WP_003223285, COG:COG0735, COG:P, GO:0000976, GO:0003700, GO:0005737, GO:0008270, GO:0045892, GO:1900376, RefSeq:WP_000110011.1, SO:0001217, UniParc:UPI00000522DC, UniRef:UniRef100_Q2G282, UniRef:UniRef50_Q2G282, UniRef:UniRef90_Q2G282 contig_1 cds 2008723 2009682 - GCA000560365_01953 serA Hydroxyacid dehydrogenase COG:COG0111, COG:H, SO:0001217, UniParc:UPI0002CB05EE, UniRef:UniRef100_Q2G281, UniRef:UniRef50_Q2G281, UniRef:UniRef90_Q2G281 contig_1 cds 2009679 2010134 - GCA000560365_01954 bcp thioredoxin-dependent thiol peroxidase COG:COG1225, COG:O, EC:1.11.1.24, GO:0016209, GO:0016491, RefSeq:WP_000939521.1, SO:0001217, UniParc:UPI00000544FC, UniRef:UniRef100_Q2G280, UniRef:UniRef50_Q5HN72, UniRef:UniRef90_A0A2K4AJG8 contig_1 cds 2010215 2011504 + GCA000560365_01955 hemL2 glutamate-1-semialdehyde 2,1-aminomutase COG:COG0001, COG:H, EC:5.4.3.8, GO:0005737, GO:0006782, GO:0008483, GO:0030170, GO:0033014, GO:0042286, RefSeq:WP_001011598.1, SO:0001217, UniParc:UPI00000544FB, UniRef:UniRef100_Q2G283, UniRef:UniRef50_Q2G283, UniRef:UniRef90_Q2G283 contig_1 cds 2011746 2012891 + GCA000560365_01956 ygaE Aromatic acid exporter family protein COG:COG4129, COG:S, SO:0001217, UniParc:UPI00015FD73E, UniRef:UniRef100_Q2G2N1, UniRef:UniRef50_Q2G2N1, UniRef:UniRef90_Q2G2N1 contig_1 cds 2013082 2014818 - GCA000560365_01957 mdlB SAV1866 family putative multidrug efflux ABC transporter BlastRules:WP_000597238, COG:COG1132, COG:V, EC:7.6.2.-, GO:0005524, GO:0005886, GO:0015421, GO:0016887, RefSeq:WP_000597238.1, SO:0001217, UniParc:UPI00000544F9, UniRef:UniRef100_Q2G2M9, UniRef:UniRef50_P71082, UniRef:UniRef90_Q2G2M9 contig_1 cds 2015109 2015651 - GCA000560365_01958 ygaC Nucleoside triphosphate/diphosphate phosphatase COG:COG3557, COG:S, EC:3.6.1.15, EC:3.6.1.6, GO:0000287, GO:0017110, GO:0017111, KEGG:K07586, RefSeq:WP_000251253.1, SO:0001217, UniParc:UPI00000D7652, UniRef:UniRef100_Q2G2M8, UniRef:UniRef50_Q2G2M8, UniRef:UniRef90_Q2G2M8 contig_1 cds 2015953 2016990 - GCA000560365_01959 mutY A/G-specific adenine glycosylase COG:COG1194, COG:L, EC:3.2.2.31, GO:0006284, GO:0019104, RefSeq:WP_000284752.1, SO:0001217, UniParc:UPI00000544F7, UniRef:UniRef100_Q2G2W0, UniRef:UniRef50_A0A7U7JQ99, UniRef:UniRef90_A0A0U1MPG3 contig_1 cds 2017142 2018119 + GCA000560365_01960 ybcI Metal-dependent hydrolase COG:COG1988, COG:R, KEGG:K07038, RefSeq:WP_000379098.1, SO:0001217, UniParc:UPI00000544F6, UniRef:UniRef100_Q2G2V9, UniRef:UniRef50_Q2G2V9, UniRef:UniRef90_Q2G2V9 contig_1 cds 2018380 2019216 - GCA000560365_01961 tagG Teichoic acid translocation permease protein TagG RefSeq:WP_000886468.1, SO:0001217, UniParc:UPI00000544F5, UniRef:UniRef100_Q2G2V7, UniRef:UniRef50_Q2G2V7, UniRef:UniRef90_Q2G2V7 contig_1 cds 2019225 2020742 - GCA000560365_01962 tagH ABC transporter domain-containing protein COG:COG1134, COG:G, RefSeq:WP_000535834.1, SO:0001217, UniParc:UPI00000544F3, UniRef:UniRef100_Q2G2H3, UniRef:UniRef50_Q2G2H3, UniRef:UniRef90_Q2G2H3 contig_1 cds 2020757 2021071 - GCA000560365_01963 Transcriptional regulator RefSeq:WP_000435806.1, SO:0001217, UniParc:UPI00000D778E, UniRef:UniRef100_Q2G2H0, UniRef:UniRef50_G5JJ30, UniRef:UniRef90_G5JJ30 contig_1 cds 2021049 2021867 - GCA000560365_01964 recX recombination regulator RecX COG:COG2137, COG:O, GO:0005737, GO:0006282, RefSeq:WP_001124419.1, SO:0001217, UniParc:UPI0000133610, UniRef:UniRef100_Q2G2G9, UniRef:UniRef50_Q2G2G9, UniRef:UniRef90_Q2G2G9 contig_1 cds 2022128 2022937 - GCA000560365_01965 sgtB monofunctional peptidoglycan glycosyltransferase SgtB BlastRules:WP_000830377, COG:COG0744, COG:M, EC:2.4.-.-, EC:2.4.99.28, GO:0005886, GO:0008360, GO:0008955, GO:0009252, GO:0030288, GO:0071555, RefSeq:WP_000830380.1, SO:0001217, UniParc:UPI00000D7827, UniRef:UniRef100_Q93Q23, UniRef:UniRef50_Q93Q23, UniRef:UniRef90_Q93Q23 contig_1 cds 2023278 2023793 - GCA000560365_01966 yajL putative protein SACOL1933 COG:COG0693, COG:V, RefSeq:WP_000163283.1, SO:0001217, UniParc:UPI0000052288, UniRef:UniRef100_P0A0K3, UniRef:UniRef50_P0A0K3, UniRef:UniRef90_P0A0K3 contig_1 cds 2023924 2024085 - GCA000560365_01967 Cytosolic protein RefSeq:WP_001005407.1, SO:0001217, UniParc:UPI00000544EF, UniRef:UniRef100_Q2G2H1, UniRef:UniRef50_A0A654BB04, UniRef:UniRef90_A0A654BB04 contig_1 cds 2024309 2025460 + GCA000560365_01968 yfkAB radical SAM/CxCxxxxC motif protein YfkAB COG:COG0535, COG:DH, GO:0008152, GO:0051539, GO:1904047, RefSeq:WP_001089613.1, SO:0001217, UniParc:UPI00004B5C55, UniRef:UniRef100_A0A0D6HBX1, UniRef:UniRef50_B9E7Z7, UniRef:UniRef90_A0AA40JNB2 contig_1 cds 2025720 2026250 - GCA000560365_01969 yciA HotDog ACOT-type domain-containing protein COG:COG1607, COG:I, RefSeq:WP_000184383.1, SO:0001217, UniParc:UPI00000D7727, UniRef:UniRef100_Q2FX15, UniRef:UniRef50_A0A654BBY2, UniRef:UniRef90_Q2FX15 contig_1 cds 2026340 2027587 - GCA000560365_01970 ampS Aminopeptidase PepS COG:COG2309, COG:E, SO:0001217, UniParc:UPI0000696C7E, UniRef:UniRef100_A0A0D6HBV5, UniRef:UniRef50_A0A9N8IJS9, UniRef:UniRef90_A0A9N8IJS9 contig_1 cds 2027599 2027805 - GCA000560365_01971 yfkK UPF0435 protein SAHV_1865 COG:COG4840, COG:S, SO:0001217, UniParc:UPI00004B5C57, UniRef:UniRef100_Q2FX13, UniRef:UniRef50_Q2FX13, UniRef:UniRef90_Q2FX13 contig_1 cds 2027946 2028410 + GCA000560365_01972 ptpA Low molecular weight protein-tyrosine-phosphatase PtpA COG:COG0394, COG:T, EC:3.1.3.48, GO:0004726, GO:0005576, GO:0030946, GO:0140793, RefSeq:WP_000228666.1, SO:0001217, UniParc:UPI000005449F, UniRef:UniRef100_Q2FX12, UniRef:UniRef50_Q2FX12, UniRef:UniRef90_Q2FX12 contig_1 cds 2028417 2028692 + GCA000560365_01973 ytxH YtxH domain-containing protein RefSeq:WP_000428172.1, SO:0001217, UniParc:UPI000005449E, UniRef:UniRef100_Q2FX11, UniRef:UniRef50_A0A2K3ZIL3, UniRef:UniRef90_Q2FX11 contig_1 cds 2028970 2030187 + GCA000560365_01974 brkB Ribonuclease BN COG:COG1295, COG:S, RefSeq:WP_000037075.1, SO:0001217, UniParc:UPI00000C7F85, UniRef:UniRef100_Q2FX10, UniRef:UniRef50_A0A077UL04, UniRef:UniRef90_A0A077UL04 contig_1 cds 2030303 2030932 - GCA000560365_01975 vraR two-component system response regulator VraR BlastRules:WP_000153530, COG:COG2197, COG:TK, GO:0000160, GO:0003677, GO:0005737, GO:0006355, KEGG:K07694, RefSeq:WP_000153530.1, SO:0001217, UniParc:UPI000005449C, UniRef:UniRef100_Q2FX09, UniRef:UniRef50_Q7A2Q1, UniRef:UniRef90_Q7A2Q1 contig_1 cds 2030922 2031965 - GCA000560365_01976 vraS Sensor protein VraS COG:COG4585, COG:T, EC:2.7.13.3, GO:0000155, GO:0005524, GO:0005886, GO:0046983, KEGG:K07681, RefSeq:WP_001017131.1, SO:0001217, UniParc:UPI000005449B, UniRef:UniRef100_Q5HEN9, UniRef:UniRef50_Q7A2Q0, UniRef:UniRef90_Q7A2Q0 contig_1 cds 2031962 2032663 - GCA000560365_01977 liaF Cell wall-active antibiotics response LiaF-like C-terminal domain-containing protein COG:COG4758, COG:T, KEGG:K11622, RefSeq:WP_000149064.1, SO:0001217, UniParc:UPI000005449A, UniRef:UniRef100_Q2FX07, UniRef:UniRef50_Q2FX07, UniRef:UniRef90_Q2FX07 contig_1 cds 2032678 2033064 - GCA000560365_01978 Staphylococcal protein RefSeq:WP_001110179.1, SO:0001217, UniParc:UPI00000D76F0, UniRef:UniRef100_Q2FX06, UniRef:UniRef50_G5JJT9, UniRef:UniRef90_Q2FX06 contig_1 cds 2033281 2034039 - GCA000560365_01979 map type I methionyl aminopeptidase COG:COG0024, COG:J, EC:3.4.11.18, GO:0004239, GO:0006508, GO:0046872, GO:0070006, RefSeq:WP_000636142.1, SO:0001217, UniParc:UPI0000054498, UniRef:UniRef100_Q5HEN6, UniRef:UniRef50_Q8CRU9, UniRef:UniRef90_Q5HEN6 contig_1 ncRNA 2034170 2034437 + GCA000560365_01980 S35 Staphylococcus sRNA 35 (srn_0335) RFAM:RF02894, SO:0000655 contig_1 cds 2034567 2035553 + GCA000560365_01981 ygaE UPF0421 protein SACOL1947 COG:COG4129, COG:S, GO:0005886, RefSeq:WP_000999713.1, SO:0001217, UniParc:UPI0000054495, UniRef:UniRef100_Q2FX03, UniRef:UniRef50_Q2FX03, UniRef:UniRef90_Q2FX03 contig_1 ncRNA 2035566 2035897 + GCA000560365_01982 S35 Staphylococcus sRNA 35 (srn_0335) RFAM:RF02894, SO:0000655 contig_1 cds 2036043 2036456 - GCA000560365_01983 Cytosolic protein RefSeq:WP_001549145.1, SO:0001217, UniParc:UPI00004B5C59, UniRef:UniRef100_Q2FX02, UniRef:UniRef50_Q2FX02, UniRef:UniRef90_Q2FX02 contig_1 cds 2036681 2037412 - GCA000560365_01984 gatD Lipid II isoglutaminyl synthase (glutamine-hydrolyzing) subunit GatD COG:COG3442, COG:R, EC:6.3.5.13, GO:0004359, GO:0008360, GO:0009236, GO:0009252, GO:0071555, GO:0140282, KEGG:K07009, RefSeq:WP_000544969.1, SO:0001217, UniParc:UPI00000D77A4, UniRef:UniRef100_A0A0H2WZ38, UniRef:UniRef50_A0A0H2WZ38, UniRef:UniRef90_A0A0H2WZ38 contig_1 cds 2037414 2038727 - GCA000560365_01985 murT lipid II isoglutaminyl synthase subunit MurT BlastRules:WP_001250336, COG:COG0769, COG:M, EC:6.3.5.13, GO:0005524, GO:0008270, GO:0008360, GO:0009252, GO:0016881, GO:0071555, GO:0140282, KEGG:K23393, RefSeq:WP_001250336.1, SO:0001217, UniParc:UPI00004B5C5B, UniRef:UniRef100_A0A0H2WZQ7, UniRef:UniRef50_A0A0H3JUU7, UniRef:UniRef90_A0A0H3JUU7 contig_1 cds 2039019 2039519 + GCA000560365_01986 ftnA H-type ferritin FtnA BlastRules:WP_000949467, COG:COG1528, COG:P, EC:1.16.3.2, GO:0004322, GO:0005829, GO:0006826, GO:0006880, GO:0008198, GO:0008199, RefSeq:WP_000949467.1, SO:0001217, UniParc:UPI0000054490, UniRef:UniRef100_Q2FWZ8, UniRef:UniRef50_Q2FWZ8, UniRef:UniRef90_Q2FWZ8 contig_1 cds 2039908 2040462 + GCA000560365_01987 dnaQ DNA polymerase III polC-type COG:COG0847, COG:L, RefSeq:WP_000613733.1, SO:0001217, UniParc:UPI000005448E, UniRef:UniRef100_Q2FWZ6, UniRef:UniRef50_Q4L7K7, UniRef:UniRef90_A0A2I7Y430 contig_1 cds 2040530 2041600 - GCA000560365_01988 dinB DNA polymerase IV COG:COG0389, COG:L, EC:2.7.7.7, GO:0000287, GO:0003684, GO:0003887, GO:0005829, GO:0006261, GO:0006281, GO:0009432, GO:0042276, RefSeq:WP_000140176.1, SO:0001217, UniParc:UPI00001297A1, UniRef:UniRef100_Q5HEM7, UniRef:UniRef50_Q49YT9, UniRef:UniRef90_P63991 contig_1 cds 2041847 2042377 - GCA000560365_01989 Permease RefSeq:WP_000548781.1, SO:0001217, UniParc:UPI00000CAC36, UniRef:UniRef100_Q2FWZ4, UniRef:UniRef50_Q2FWZ4, UniRef:UniRef90_Q2FWZ4 contig_1 cds 2042547 2043908 - GCA000560365_01990 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD COG:COG2265, COG:J, EC:2.1.1.-, EC:2.1.1.190, GO:0008649, GO:0046872, GO:0051539, GO:0070041, GO:0070475, KEGG:K03215, RefSeq:WP_001147868.1, SO:0001217, UniParc:UPI00004B5C5C, UniRef:UniRef100_Q5HEM5, UniRef:UniRef50_Q8CRU6, UniRef:UniRef90_Q7A4Q9 contig_1 cds 2043989 2044936 - GCA000560365_01991 dagK diacylglycerol kinase COG:COG1597, COG:IR, EC:2.7.1.107, GO:0003951, GO:0004143, GO:0005524, GO:0005886, GO:0008654, GO:0046872, RefSeq:WP_001231451.1, SO:0001217, UniParc:UPI0000054489, UniRef:UniRef100_Q2FWZ2, UniRef:UniRef50_Q6GFF9, UniRef:UniRef90_Q6GFF9 contig_1 ncRNA 2044981 2045302 + GCA000560365_01992 S35 Staphylococcus sRNA 35 (srn_0335) RFAM:RF02894, SO:0000655 contig_1 cds 2045705 2047132 - GCA000560365_01993 gatB Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB COG:COG0064, COG:J, EC:6.3.5.-, GO:0005524, GO:0006412, GO:0016884, GO:0050566, GO:0050567, GO:0070681, KEGG:K02434, RefSeq:WP_000545370.1, SO:0001217, UniParc:UPI000012B162, UniRef:UniRef100_Q2FWZ0, UniRef:UniRef50_Q45486, UniRef:UniRef90_Q45486 contig_1 cds 2047145 2048602 - GCA000560365_01994 gatA Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA COG:COG0154, COG:J, EC:6.3.5.7, GO:0005524, GO:0006412, GO:0006424, GO:0030956, GO:0050567, KEGG:K02433, RefSeq:WP_000027928.1, SO:0001217, UniParc:UPI00003D0D85, UniRef:UniRef100_Q2FWY9, UniRef:UniRef50_O06491, UniRef:UniRef90_P63488 contig_1 cds 2048604 2048906 - GCA000560365_01995 gatC Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC COG:COG0721, COG:J, EC:6.3.5.-, GO:0005524, GO:0006412, GO:0006424, GO:0006450, GO:0030956, GO:0050566, GO:0050567, GO:0070681, RefSeq:WP_000170162.1, SO:0001217, UniParc:UPI0000054485, UniRef:UniRef100_Q2FWY8, UniRef:UniRef50_Q2FWY8, UniRef:UniRef90_Q2FWY8 contig_1 cds 2049273 2050811 + GCA000560365_01996 putP sodium/proline symporter PutP COG:COG0591, COG:E, GO:0005298, GO:0005886, GO:0006814, GO:0015193, GO:0015824, GO:0016020, GO:0031402, RefSeq:WP_000957015.1, SO:0001217, UniParc:UPI0000696C81, UniRef:UniRef100_Q2FFJ3, UniRef:UniRef50_Q2FWY7, UniRef:UniRef90_Q2FWY7 contig_1 cds 2050900 2052099 - GCA000560365_01997 camS CamS family sex pheromone protein COG:COG4851, COG:R, RefSeq:WP_000831698.1, SO:0001217, UniParc:UPI00004B5C5D, UniRef:UniRef100_Q2FWY6, UniRef:UniRef50_Q2FWY6, UniRef:UniRef90_Q2FWY6 contig_1 cds 2052112 2054115 - GCA000560365_01998 ligA NAD-dependent DNA ligase LigA COG:COG0272, COG:L, EC:6.5.1.2, GO:0003677, GO:0003911, GO:0005829, GO:0006260, GO:0006281, GO:0006288, GO:0046872, RefSeq:WP_000774565.1, SO:0001217, UniParc:UPI00000D789E, UniRef:UniRef100_Q2G1Y0, UniRef:UniRef50_Q837V6, UniRef:UniRef90_Q99SY3 contig_1 cds 2054119 2056311 - GCA000560365_01999 pcrA DNA helicase PcrA COG:COG0210, COG:L, EC:3.6.4.12, EC:5.6.2.4, GO:0000725, GO:0003677, GO:0003678, GO:0003689, GO:0005524, GO:0005737, GO:0005829, GO:0006268, GO:0006281, GO:0009378, GO:0016853, GO:0016887, GO:0033202, GO:0036121, GO:0061749, GO:0061775, GO:0140584, GO:0140665, GO:0140849, GO:1990518, RefSeq:WP_000992921.1, SO:0001217, UniParc:UPI0000054480, UniRef:UniRef100_Q53727, UniRef:UniRef50_Q53727, UniRef:UniRef90_Q53727 contig_1 cds 2056308 2057000 - GCA000560365_02000 pcrB heptaprenylglyceryl phosphate synthase COG:COG1646, COG:I, EC:2.5.1.n9, GO:0000287, GO:0002094, GO:0046474, RefSeq:WP_000272069.1, SO:0001217, UniParc:UPI0000696C82, UniRef:UniRef100_Q2FFI9, UniRef:UniRef50_Q53726, UniRef:UniRef90_Q53726 contig_1 cds 2057172 2057474 - GCA000560365_02001 yerC His repressor COG:COG4496, COG:R, RefSeq:WP_001165363.1, SO:0001217, UniParc:UPI000005447E, UniRef:UniRef100_Q2G1Y1, UniRef:UniRef50_Q7BVT7, UniRef:UniRef90_Q2G1Y1 contig_1 cds 2057583 2058878 - GCA000560365_02002 purB adenylosuccinate lyase COG:COG0015, COG:F, EC:4.3.2.2, GO:0004018, GO:0005829, GO:0006189, GO:0009152, GO:0044208, GO:0070626, KEGG:K01756, RefSeq:WP_000572878.1, SO:0001217, UniParc:UPI00000D76FE, UniRef:UniRef100_Q2G2S0, UniRef:UniRef50_Q2G2S0, UniRef:UniRef90_Q2G2S0 contig_1 cds 2059739 2060905 + GCA000560365_02003 scpA cysteine protease staphopain A BlastRules:WP_000827761, EC:3.4.22.48, GO:0005576, GO:0006508, GO:0008234, RefSeq:WP_000827748.1, SO:0001217, UniParc:UPI000005447C, UniRef:UniRef100_Q2G2R8, UniRef:UniRef50_P81297, UniRef:UniRef90_P81297 contig_1 cds 2060936 2061262 + GCA000560365_02004 Staphostatin A domain-containing protein RefSeq:WP_000434933.1, SO:0001217, UniParc:UPI00000CAAE0, UniRef:UniRef100_Q2G2R7, UniRef:UniRef50_Q2G2R7, UniRef:UniRef90_Q2G2R7 contig_1 cds 2061554 2061727 - GCA000560365_02005 NETI motif-containing protein RefSeq:WP_000669862.1, SO:0001217, UniParc:UPI000005447A, UniRef:UniRef100_Q2G2R6, UniRef:UniRef50_A0A0B5APK8, UniRef:UniRef90_Q2G2R6 contig_1 cds 2061708 2062310 - GCA000560365_02006 yebE UPF0316 protein SA1727 COG:COG4843, COG:S, GO:0005886, RefSeq:WP_000011538.1, SO:0001217, UniParc:UPI0000696C83, UniRef:UniRef100_Q2FFI4, UniRef:UniRef50_Q2G2R9, UniRef:UniRef90_Q2G2R9 contig_1 cds 2062581 2063402 - GCA000560365_02007 nadE nicotinate phosphoribosyltransferase EC:6.3.1.5, EC:6.3.4.21, GO:0003952, GO:0004359, GO:0004516, GO:0005524, GO:0005737, GO:0008795, GO:0009435, GO:0046872, KEGG:K00763, RefSeq:WP_000040873.1, SO:0001217, UniParc:UPI00004B5C5F, UniRef:UniRef100_Q2G236, UniRef:UniRef50_Q2G236, UniRef:UniRef90_Q2G236 contig_1 cds 2063395 2064864 - GCA000560365_02008 pncB nicotinate phosphoribosyltransferase COG:COG1488, COG:H, EC:6.3.4.21, GO:0004516, GO:0009435, KEGG:K00763, RefSeq:WP_000284431.1, SO:0001217, UniParc:UPI00003B1B09, UniRef:UniRef100_A0A0D3Q8S4, UniRef:UniRef50_O32090, UniRef:UniRef90_A0A3A5LU92 contig_1 cds 2065048 2066124 + GCA000560365_02009 nos Nitric oxide synthase oxygenase COG:COG4362, COG:P, EC:1.14.14.47, GO:0004517, GO:0006809, GO:0020037, GO:0046872, RefSeq:WP_000897635.1, SO:0001217, UniParc:UPI00000D76C2, UniRef:UniRef100_Q5HEK7, UniRef:UniRef50_Q6GFE2, UniRef:UniRef90_Q6GFE2 contig_1 cds 2066144 2066938 + GCA000560365_02010 pheA2 prephenate dehydratase COG:COG0077, COG:E, RefSeq:WP_001177817.1, SO:0001217, UniParc:UPI00004B5C60, UniRef:UniRef100_A0A0E7Y8C1, UniRef:UniRef50_A0A0E7Y8C1, UniRef:UniRef90_A0A0E7Y8C1 contig_1 cds 2067128 2068690 - GCA000560365_02011 sdcS Sodium-dependent dicarboxylate transporter SdcS COG:COG0471, COG:G, GO:0005886, GO:0006814, GO:0015293, RefSeq:WP_000323167.1, SO:0001217, UniParc:UPI0000696C84, UniRef:UniRef100_Q2FFH9, UniRef:UniRef50_Q2FWY4, UniRef:UniRef90_Q2FWY4 contig_1 cds 2068895 2069992 - GCA000560365_02012 Cell wall surface anchor family protein RefSeq:WP_000275730.1, SO:0001217, UniParc:UPI00004B5C62, UniRef:UniRef100_Q2FWY3, UniRef:UniRef50_A0A2U0IGB7, UniRef:UniRef90_A0A2U0IGB7 contig_1 cds 2070364 2070924 + GCA000560365_02013 pncA Nicotinamidase COG:COG1335, COG:HR, RefSeq:WP_000149686.1, SO:0001217, UniParc:UPI0000054471, UniRef:UniRef100_Q2FWY2, UniRef:UniRef50_B9E842, UniRef:UniRef90_A0A077UMZ6 contig_1 cds 2070977 2071906 + GCA000560365_02014 ppaC manganese-dependent inorganic pyrophosphatase COG:C, COG:COG1227, EC:3.6.1.1, GO:0004427, GO:0005737, GO:0030145, KEGG:K15986, RefSeq:WP_001140871.1, SO:0001217, UniParc:UPI0000131FDA, UniRef:UniRef100_Q2FWY1, UniRef:UniRef50_P37487, UniRef:UniRef90_Q2FWY1 contig_1 cds 2072326 2073705 + GCA000560365_02015 aldH1 4,4'-diaponeurosporen-aldehyde dehydrogenase COG:COG1012, COG:I, EC:1.2.1.-, GO:0004029, GO:0005737, GO:0006081, GO:0016117, GO:0016620, RefSeq:WP_001021214.1, SO:0001217, UniParc:UPI000005446E, UniRef:UniRef100_Q2FWX9, UniRef:UniRef50_Q2FWX9, UniRef:UniRef90_Q2FWX9 contig_1 cds 2073825 2074853 - GCA000560365_02016 pgl putative protein SAOUHSC_02143 COG:COG2706, COG:G, GO:0005829, GO:0017057, RefSeq:WP_000181322.1, SO:0001217, UniParc:UPI000005446D, UniRef:UniRef100_Q2FWX8, UniRef:UniRef50_Q2FWX8, UniRef:UniRef90_Q2FWX8 contig_1 cds 2075123 2075524 + GCA000560365_02017 YolD-like family protein RefSeq:WP_000205106.1, SO:0001217, UniParc:UPI000005446C, UniRef:UniRef100_Q2FWX7, UniRef:UniRef50_Q2FWX7, UniRef:UniRef90_Q2FWX7 contig_1 ncRNA 2075787 2076024 + GCA000560365_02018 tsr24 S. aureus tsr24 small RNA RFAM:RF02577, SO:0000655 contig_1 cds 2076097 2076270 - GCA000560365_02019 Phage protein RefSeq:WP_000267034.1, SO:0001217, UniParc:UPI000005446B, UniRef:UniRef100_Q2FWX6, UniRef:UniRef50_Q2FWX6, UniRef:UniRef90_Q2FWX6 contig_1 cds 2076649 2077761 + GCA000560365_02020 Peptidase C45 hydrolase domain-containing protein COG:COG4927, COG:R, SO:0001217, UniParc:UPI000005446A, UniRef:UniRef100_Q2FWX5, UniRef:UniRef50_A0A380GLM7, UniRef:UniRef90_Q2FWX5 contig_1 cds 2077818 2078660 - GCA000560365_02021 DUF4097 domain-containing protein RefSeq:WP_000713072.1, SO:0001217, UniParc:UPI0000054469, UniRef:UniRef100_Q2FWX4, UniRef:UniRef50_Q2FWX4, UniRef:UniRef90_Q2FWX4 contig_1 cds 2078657 2079214 - GCA000560365_02022 DUF1700 domain-containing protein COG:COG4709, COG:S, RefSeq:WP_001033971.1, SO:0001217, UniParc:UPI00000D7831, UniRef:UniRef100_W8U4M8, UniRef:UniRef50_Q2FWX3, UniRef:UniRef90_Q2FWX3 contig_1 cds 2079274 2079798 - GCA000560365_02023 Lipoprotein RefSeq:WP_000966288.1, SO:0001217, UniParc:UPI0000054467, UniRef:UniRef100_Q2FWX2, UniRef:UniRef50_G5JI25, UniRef:UniRef90_Q2FWX2 contig_1 cds 2079919 2080482 + GCA000560365_02024 Thioredoxin family protein RefSeq:WP_000182842.1, SO:0001217, UniParc:UPI00000D769F, UniRef:UniRef100_Q2FWX1, UniRef:UniRef50_Q2FWX1, UniRef:UniRef90_Q2FWX1 contig_1 cds 2080548 2081288 - GCA000560365_02025 pmtD phenol-soluble modulin export ABC transporter permease subunit PmtD BlastRules:WP_001221651, BlastRules:WP_001830379, RefSeq:WP_001221651.1, SO:0001217, UniParc:UPI0000054465, UniRef:UniRef100_Q2FWX0, UniRef:UniRef50_Q2FWX0, UniRef:UniRef90_Q2FWX0 contig_1 cds 2081288 2082160 - GCA000560365_02026 pmtC phenol-soluble modulin export ABC transporter ATP-binding protein PmtC BlastRules:WP_000763048, BlastRules:WP_001830444, COG:COG1131, COG:JV, RefSeq:WP_000763048.1, SO:0001217, UniParc:UPI0000054464, UniRef:UniRef100_Q2FWW9, UniRef:UniRef50_S2XE79, UniRef:UniRef90_A0A390VQC9 contig_1 cds 2082157 2082837 - GCA000560365_02027 pmtB phenol-soluble modulin export ABC transporter permease subunit PmtB BlastRules:WP_000645727, BlastRules:WP_002494112, RefSeq:WP_000645727.1, SO:0001217, UniParc:UPI0000054463, UniRef:UniRef100_Q2FWW8, UniRef:UniRef50_Q2FWW8, UniRef:UniRef90_Q2FWW8 contig_1 cds 2082838 2083734 - GCA000560365_02028 pmtA phenol-soluble modulin export ABC transporter ATP-binding protein PmtA BlastRules:WP_000991302, BlastRules:WP_001830432, COG:COG1131, COG:JV, RefSeq:WP_000991302.1, SO:0001217, UniParc:UPI0000054462, UniRef:UniRef100_Q2FWW7, UniRef:UniRef50_A0A380DUR2, UniRef:UniRef90_A0A380DUR2 contig_1 cds 2083731 2084111 - GCA000560365_02029 pmtR PSM export ABC transporter transcriptional regulator PmtR COG:COG1725, COG:K, KEGG:K07979, RefSeq:WP_000691584.1, SO:0001217, UniParc:UPI00000D785D, UniRef:UniRef100_Q2FWW6, UniRef:UniRef50_Q2FWW6, UniRef:UniRef90_Q2FWW6 contig_1 cds 2084375 2084551 - GCA000560365_02030 SE1626 family protein RefSeq:WP_000681968.1, SO:0001217, UniParc:UPI00000D76B9, UniRef:UniRef100_Q2FWW5, UniRef:UniRef50_A0A151A0Y9, UniRef:UniRef90_Q2FWW5 contig_1 cds 2085092 2086378 + GCA000560365_02031 aspB Aminotransferase class I/classII large domain-containing protein COG:COG0436, COG:E, RefSeq:WP_001068542.1, SO:0001217, UniParc:UPI000005445D, UniRef:UniRef100_Q2FWW3, UniRef:UniRef50_A0A380FXV6, UniRef:UniRef90_Q2FWW3 contig_1 cds 2086702 2086992 - GCA000560365_02032 MAP domain-containing protein RefSeq:WP_000671712.1, SO:0001217, UniParc:UPI000069AB0B, UniRef:UniRef100_Q2FWW2, UniRef:UniRef50_Q2FWW2, UniRef:UniRef90_Q2FWW2 contig_1 cds 2087003 2088757 - GCA000560365_02033 65 kDa membrane protein GO:0005886, KEGG:K14204, RefSeq:WP_001549158.1, SO:0001217, UniParc:UPI000005445B, UniRef:UniRef100_A6QIG2, UniRef:UniRef50_Q53599, UniRef:UniRef90_A6QIG2 contig_1 cds 2089143 2089343 + GCA000560365_02034 Beta-hemolysin SO:0001217, UniParc:UPI00000D77C2, UniRef:UniRef100_A0A0H3K9G7, UniRef:UniRef50_A0A7U6XWR1, UniRef:UniRef90_A0A7U6XWR1 contig_1 sorf 2089820 2089894 + GCA000560365_02035 Phage protein SO:0001217, UniParc:UPI000865C40E, UniRef:UniRef100_A0A1C9ZYE6, UniRef:UniRef50_A0A0H5BLP8, UniRef:UniRef90_A0A0H5BLP8 contig_1 cds 2090518 2090868 - GCA000560365_02036 scn complement inhibitor SCIN-A BlastRules:WP_000702263, GO:0005576, KEGG:K14199, NCBIProtein:ADL23798.1, RefSeq:WP_000702263.1, SO:0001217, UniParc:UPI00000D7752, UniRef:UniRef100_Q2FFF8, UniRef:UniRef50_Q2FWV6, UniRef:UniRef90_Q2FWV6 contig_1 ncRNA 2091027 2091168 - GCA000560365_02037 sprD Small pathogenicity island RNA D RFAM:RF01828, SO:0000655 contig_1 cds 2091553 2092002 + GCA000560365_02038 chp chemotaxis-inhibiting protein CHIPS GO:0005576, RefSeq:WP_000727649.1, SO:0001217, UniParc:UPI00001B580C, UniRef:UniRef100_Q2FFF7, UniRef:UniRef50_Q2FWV5, UniRef:UniRef90_Q2FWV5, VFDB:VFC0258, VFDB:VFG002422 contig_1 cds 2092097 2092393 - GCA000560365_02039 Peptidoglycan hydrolase, putative RefSeq:WP_001110822.1, SO:0001217, UniParc:UPI0000696C86, UniRef:UniRef100_Q2FWV4, UniRef:UniRef50_A0A345AR31, UniRef:UniRef90_Q2FWV4 contig_1 ncRNA 2092635 2092785 - GCA000560365_02040 sprX Small pathogenicity island RNA X RFAM:RF02672, SO:0000655 contig_1 cds 2093082 2093573 - GCA000560365_02041 sak staphylokinase BlastRules:WP_000920038, GO:0005576, NCBIProtein:CAA24957.1, RefSeq:WP_000919350.1, SO:0001217, UniParc:UPI00000B6E0F, UniRef:UniRef100_Q6GFB2, UniRef:UniRef50_P15240, UniRef:UniRef90_P15240 contig_1 cds 2093764 2094519 - GCA000560365_02042 Autolysin RefSeq:WP_000861038.1, SO:0001217, UniParc:UPI0000054453, UniRef:UniRef100_Q2FWV2, UniRef:UniRef50_A0A1W7ACD2, UniRef:UniRef90_A0A380E267 contig_1 cds 2094531 2094785 - GCA000560365_02043 phage holin COG:COG5546, COG:S, GO:0140911, RefSeq:WP_000611512.1, SO:0001217, UniParc:UPI0000054452, UniRef:UniRef100_Q2FWV1, UniRef:UniRef50_A0A3D8ZD14, UniRef:UniRef90_A0A2X2MCQ2 contig_1 ncRNA 2095025 2095204 - GCA000560365_02044 rli28 Listeria sRNA rli28 RFAM:RF01492, SO:0000655 contig_1 cds 2095323 2095553 - GCA000560365_02045 DUF2951 domain-containing protein SO:0001217, UniRef:UniRef50_A0A7U0G7S2, UniRef:UniRef90_UPI00352AF0CC contig_1 cds 2095677 2095964 - GCA000560365_02046 Phage protein RefSeq:WP_001040261.1, SO:0001217, UniParc:UPI000005444F, UniRef:UniRef100_Q2FWU7, UniRef:UniRef50_A0A0H3JMR5, UniRef:UniRef90_W5R962 contig_1 cds 2096011 2096163 - GCA000560365_02047 Phage protein SO:0001217, UniRef:UniRef50_A0A345AQI6, UniRef:UniRef90_W5RAM1 contig_1 cds 2096153 2099938 - GCA000560365_02048 Peptidase S74 domain-containing protein RefSeq:WP_000582165.1, SO:0001217, UniParc:UPI0000696C87, UniRef:UniRef100_A0A9X9P4I3, UniRef:UniRef50_A0A2I6PDL0, UniRef:UniRef90_A0A9X9JUS9 contig_1 cds 2099954 2101438 - GCA000560365_02049 Phage tail protein RefSeq:WP_000567394.1, SO:0001217, UniParc:UPI0000696C88, UniRef:UniRef100_A0A0H3U501, UniRef:UniRef50_C5I676, UniRef:UniRef90_C8CH31 contig_1 cds 2101435 2105964 - GCA000560365_02050 lysostaphin RefSeq:WP_031808152.1, SO:0001217, UniParc:UPI00044FCE8B, UniRef:UniRef100_UPI00044FCE8B, UniRef:UniRef50_A0A0U1MQ46, UniRef:UniRef90_A0A5P6T594 contig_1 cds 2106021 2106158 - GCA000560365_02051 Phage protein SO:0001217, UniRef:UniRef50_C8CH29, UniRef:UniRef90_A0A898CKY1 contig_1 cds 2106209 2106559 - GCA000560365_02052 gpG phage tail assembly chaperone G RefSeq:WP_001096354.1, SO:0001217, UniParc:UPI0000696C8A, UniRef:UniRef100_A0A0H3U503, UniRef:UniRef50_A0A0H3U503, UniRef:UniRef90_A0A0H3U503 contig_1 cds 2106875 2107519 - GCA000560365_02053 Phage tail protein RefSeq:WP_000260578.1, SO:0001217, UniParc:UPI0000696C8C, UniRef:UniRef100_A0A0H3U4E6, UniRef:UniRef50_Q4L5J9, UniRef:UniRef90_A0A7U7JQL9 contig_1 cds 2107523 2107927 - GCA000560365_02054 Bacteriophage protein RefSeq:WP_000565500.1, SO:0001217, UniParc:UPI00015FD6CB, UniRef:UniRef100_A0A1S6AV09, UniRef:UniRef50_Q4L5J8, UniRef:UniRef90_A0A2K4ANR9 contig_1 cds 2107924 2108328 - GCA000560365_02055 Phage protein RefSeq:WP_000114229.1, SO:0001217, UniParc:UPI0000696C8D, UniRef:UniRef100_A0A0H3U2V1, UniRef:UniRef50_A0A9P3ZD13, UniRef:UniRef90_A0A9P3ZD13 contig_1 cds 2108325 2108687 - GCA000560365_02056 Phage protein RefSeq:WP_000755150.1, SO:0001217, UniParc:UPI00000CAC93, UniRef:UniRef100_A0AA44A5F5, UniRef:UniRef50_Q4L5J6, UniRef:UniRef90_A0A7U7PW63 contig_1 cds 2108671 2108955 - GCA000560365_02057 Phage head-tail adapter protein RefSeq:WP_000150936.1, SO:0001217, UniParc:UPI00000CACBA, UniRef:UniRef100_A0AA43V301, UniRef:UniRef50_A0A7U7PWE4, UniRef:UniRef90_A0AA43V301 contig_1 cds 2108945 2109229 - GCA000560365_02058 Phage protein RefSeq:WP_000238236.1, SO:0001217, UniParc:UPI00000CAD90, UniRef:UniRef100_A0A9X9P1T4, UniRef:UniRef50_A0A0H3U504, UniRef:UniRef90_A0A6B0BAF2 contig_1 cds 2109249 2110394 - GCA000560365_02059 phage major capsid protein GO:0005198, GO:0019068, GO:0044423, RefSeq:WP_000154559.1, SO:0001217, UniParc:UPI00000CAC20, UniRef:UniRef100_A0A977TEQ5, UniRef:UniRef50_B9DJD8, UniRef:UniRef90_A0A5S9C4Q8 contig_1 cds 2110418 2111155 - GCA000560365_02060 clpP ATP-dependent Clp protease proteolytic subunit COG:COG0740, COG:O, EC:3.4.21.92, KEGG:K01358, RefSeq:WP_000642728.1, SO:0001217, UniParc:UPI00000CAB27, UniRef:UniRef100_A0A1X9GZV5, UniRef:UniRef50_A0A173M2D6, UniRef:UniRef90_A0A173M2D6 contig_1 cds 2111139 2112326 - GCA000560365_02061 phage portal protein GO:0005198, GO:0019068, GO:0044423, SO:0001217, UniRef:UniRef50_A0A9X9JZ49, UniRef:UniRef90_A0A9X9JZ49 contig_1 cds 2112342 2114003 - GCA000560365_02062 ymfN Terminase large subunit COG:COG4626, COG:X, RefSeq:WP_000625088.1, SO:0001217, UniParc:UPI00000CADB1, UniRef:UniRef100_A0A9X9JWR2, UniRef:UniRef50_Q4L5J1, UniRef:UniRef90_A0A7U7JQH6 contig_1 cds 2114000 2114344 - GCA000560365_02063 Phage protein SO:0001217, UniRef:UniRef50_A0AAP7IF51, UniRef:UniRef90_UPI00090F1C5D contig_1 cds 2114474 2114773 - GCA000560365_02064 mcrA Putative HNH nuclease YajD COG:COG1403, COG:V, RefSeq:WP_000988336.1, SO:0001217, UniParc:UPI00003B180E, UniRef:UniRef100_A0A075LZI9, UniRef:UniRef50_A0A2X2K0P5, UniRef:UniRef90_A0A6B0BKP5 contig_1 cds 2115005 2115421 - GCA000560365_02065 Transcriptional regulator RefSeq:WP_000590122.1, SO:0001217, UniParc:UPI00000CACDE, UniRef:UniRef100_A0AA43V3D4, UniRef:UniRef50_Q4L3V7, UniRef:UniRef90_A0A345AR05 contig_1 cds 2115449 2115649 - GCA000560365_02066 Phage protein RefSeq:WP_000265043.1, SO:0001217, UniParc:UPI000009B286, UniRef:UniRef100_W5R8L4, UniRef:UniRef50_A0A0H3JV18, UniRef:UniRef90_A0A0H3JV18 contig_1 cds 2115649 2115798 - GCA000560365_02067 rinB transcriptional activator RinB SO:0001217, UniRef:UniRef50_A0A653ZBR0, UniRef:UniRef90_A0AA47KWC5 contig_1 cds 2115795 2116181 - GCA000560365_02068 Phage protein SO:0001217, UniRef:UniRef50_C8CH08, UniRef:UniRef90_A0A0E3T9I5 contig_1 cds 2116178 2116384 - GCA000560365_02069 DUF1381 domain-containing protein SO:0001217, UniRef:UniRef50_B2ZYX3, UniRef:UniRef90_A0A0N9BAZ6 contig_1 cds 2116381 2116626 - GCA000560365_02070 Phage protein RefSeq:WP_001282074.1, SO:0001217, UniParc:UPI0000505B47, UniRef:UniRef100_A0A0H3U2V0, UniRef:UniRef50_A0A0H3U2V0, UniRef:UniRef90_A0A0H3U2V0 contig_1 cds 2116663 2117196 - GCA000560365_02071 dUTP diphosphatase RefSeq:WP_000181819.1, SO:0001217, UniParc:UPI0000696C90, UniRef:UniRef100_A0A0H3U2T1, UniRef:UniRef50_A0A5C8XBY4, UniRef:UniRef90_A0A0U1MJL5 contig_1 cds 2117189 2117431 - GCA000560365_02072 Phage protein RefSeq:WP_000700108.1, SO:0001217, UniParc:UPI00000CAF0C, UniRef:UniRef100_A0A2I6PEF8, UniRef:UniRef50_A0A2I6PEF8, UniRef:UniRef90_A0A2I6PEF8 contig_1 cds 2117421 2117657 - GCA000560365_02073 DUF1024 domain-containing protein RefSeq:WP_001065101.1, SO:0001217, UniParc:UPI00000CAF0D, UniRef:UniRef100_A0A0H3U313, UniRef:UniRef50_A9CR86, UniRef:UniRef90_A0A0H3U313 contig_1 cds 2117650 2118021 - GCA000560365_02074 Acetyltransferase RefSeq:WP_001549172.1, SO:0001217, UniParc:UPI0000696C91, UniRef:UniRef100_A0A1S6BJ04, UniRef:UniRef50_C8CH13, UniRef:UniRef90_A0A0H3U4X7 contig_1 cds 2118030 2118272 - GCA000560365_02075 Phage family protein RefSeq:WP_000131383.1, SO:0001217, UniParc:UPI0000696C92, UniRef:UniRef100_A0A0H3U4B0, UniRef:UniRef50_M9NTB1, UniRef:UniRef90_A0A0H3U4B0 contig_1 cds 2118276 2118644 - GCA000560365_02076 Phage protein RefSeq:WP_000101288.1, SO:0001217, UniParc:UPI00000CAF10, UniRef:UniRef100_A0A0U1MQ67, UniRef:UniRef50_A0A075M052, UniRef:UniRef90_A0A075M052 contig_1 cds 2118657 2119061 - GCA000560365_02077 Phage protein RefSeq:WP_000401977.1, SO:0001217, UniParc:UPI0000696C94, UniRef:UniRef100_A0A0H3U2W2, UniRef:UniRef50_A0A7U7JQI6, UniRef:UniRef90_A0A7U7JQI6 contig_1 cds 2119070 2119288 - GCA000560365_02078 Phage protein RefSeq:WP_000338530.1, SO:0001217, UniParc:UPI000009B4CF, UniRef:UniRef100_A0A9X9JUK2, UniRef:UniRef50_A0A0H3K3X1, UniRef:UniRef90_A0A0H3K3X1 contig_1 cds 2119295 2120188 - GCA000560365_02079 dnaD DnaD domain-containing protein COG:COG3935, COG:L, RefSeq:WP_000148333.1, SO:0001217, UniParc:UPI00000CA984, UniRef:UniRef100_A0A075M4D6, UniRef:UniRef50_A0EWX4, UniRef:UniRef90_A0A2I6PDG7 contig_1 cds 2120218 2120688 - GCA000560365_02080 ssb Single-stranded DNA-binding protein COG:COG0629, COG:L, GO:0003697, GO:0006260, GO:0009295, RefSeq:WP_000934753.1, SO:0001217, UniParc:UPI0000696C95, UniRef:UniRef100_A0A0H3U4B5, UniRef:UniRef50_P37455, UniRef:UniRef90_Q931K4 contig_1 cds 2120689 2121174 - GCA000560365_02081 phnP Metallo-beta-lactamase superfamily domain protein COG:COG1235, COG:P, SO:0001217, UniParc:UPI0000696C96, UniRef:UniRef100_A0A0H3U2T4, UniRef:UniRef50_A0A499SQV4, UniRef:UniRef90_S4V971 contig_1 cds 2121387 2122307 - GCA000560365_02082 DNA single-strand annealing proteins KEGG:K07455, RefSeq:WP_000138475.1, SO:0001217, UniParc:UPI000009BBBB, UniRef:UniRef100_A0A9X9P1Q5, UniRef:UniRef50_A0A2H4JDY2, UniRef:UniRef90_A0A7U7JQQ2 contig_1 cds 2122309 2124252 - GCA000560365_02083 Nuclease SbcCD subunit C RefSeq:WP_000700561.1, SO:0001217, UniParc:UPI0001698996, UniRef:UniRef100_A0A0H2XI78, UniRef:UniRef50_A0A0U1MQA4, UniRef:UniRef90_A0A0U1MQA4 contig_1 cds 2124261 2124524 - GCA000560365_02084 Phage protein RefSeq:WP_001205732.1, SO:0001217, UniParc:UPI00000D7769, UniRef:UniRef100_A0A0E3TAG5, UniRef:UniRef50_O80079, UniRef:UniRef90_O80079 contig_1 cds 2124533 2124793 - GCA000560365_02085 DUF1108 domain-containing protein RefSeq:WP_000291513.1, SO:0001217, UniParc:UPI0000696C98, UniRef:UniRef100_A0A0H3U2T6, UniRef:UniRef50_B2ZYV1, UniRef:UniRef90_A0A0H3U2T6 contig_1 cds 2124833 2125093 - GCA000560365_02086 DUF2482 domain-containing protein RefSeq:WP_001549178.1, SO:0001217, UniParc:UPI0000696C99, UniRef:UniRef100_A0A0H3U2W4, UniRef:UniRef50_A0A0H3U2W4, UniRef:UniRef90_A0A0H3U2W4 contig_1 cds 2125188 2125349 - GCA000560365_02087 DUF1270 domain-containing protein RefSeq:WP_001285960.1, SO:0001217, UniParc:UPI00015FD6D1, UniRef:UniRef100_A0A0H3U4Y7, UniRef:UniRef50_B2ZYU9, UniRef:UniRef90_S4V7J2 contig_1 cds 2125346 2125666 - GCA000560365_02088 DUF771 domain-containing protein COG:COG4707, COG:X, RefSeq:WP_001120199.1, SO:0001217, UniParc:UPI0000696C9A, UniRef:UniRef100_A0A0H3U4C3, UniRef:UniRef50_Q4L5G9, UniRef:UniRef90_A0A075LYF5 contig_1 cds 2125725 2125955 + GCA000560365_02089 hypothetical protein RefSeq:WP_000549548.1, SO:0001217, UniParc:UPI00015FD6D2, UniRef:UniRef100_A0A0H3U2T9, UniRef:UniRef50_A0A0H3U2T9, UniRef:UniRef90_A0A0H3U2T9 contig_1 cds 2125952 2126128 - GCA000560365_02090 hypothetical protein RefSeq:WP_001001356.1, SO:0001217, UniParc:UPI00003B1A91, UniRef:UniRef100_A0A2C9TR45, UniRef:UniRef50_A0A2C9TR45, UniRef:UniRef90_A0A2C9TR45 contig_1 cds 2126144 2126896 - GCA000560365_02091 kilAC Anti-repressor COG:COG3645, COG:X, KEGG:K07741, RefSeq:WP_001148642.1, SO:0001217, UniParc:UPI0000696C9C, UniRef:UniRef100_A0A0H3U319, UniRef:UniRef50_A0A0C6ELE4, UniRef:UniRef90_C5I631 contig_1 cds 2126947 2127276 + GCA000560365_02092 Phage protein RefSeq:WP_000180411.1, SO:0001217, UniParc:UPI0000696C9D, UniRef:UniRef100_A0A0H3U4Z1, UniRef:UniRef50_A0A0H3JR08, UniRef:UniRef90_A0A0H3JR08 contig_1 cds 2127265 2127480 - GCA000560365_02093 DUF2829 domain-containing protein RefSeq:WP_001025404.1, SO:0001217, UniParc:UPI00000C7FA5, UniRef:UniRef100_A0A0H3U4C7, UniRef:UniRef50_A0A0H3U4C7, UniRef:UniRef90_A0A0H3U4C7 contig_1 cds 2127496 2127759 - GCA000560365_02094 xRE Helix-turn-helix domain protein COG:COG1476, COG:K, RefSeq:WP_000854072.1, SO:0001217, UniParc:UPI0000054223, UniRef:UniRef100_Q2FY91, UniRef:UniRef50_Q2FY91, UniRef:UniRef90_Q2FY91 contig_1 cds 2127892 2128605 + GCA000560365_02095 HTH cro/C1-type domain-containing protein COG:COG2932, COG:X, RefSeq:WP_001031454.1, SO:0001217, UniParc:UPI0000054224, UniRef:UniRef100_Q2FY89, UniRef:UniRef50_A0A0D6XS71, UniRef:UniRef90_A0A2I6PF08 contig_1 cds 2128621 2129553 + GCA000560365_02096 dnaQ Exonuclease family COG:COG0847, COG:L, RefSeq:WP_000759682.1, SO:0001217, UniParc:UPI000009BB0A, UniRef:UniRef100_Q2FY88, UniRef:UniRef50_A0A240C1T0, UniRef:UniRef90_Q2FY88 contig_1 cds 2129559 2129900 + GCA000560365_02097 Phage protein RefSeq:WP_000591749.1, SO:0001217, UniParc:UPI0000054226, UniRef:UniRef100_M9NTH6, UniRef:UniRef50_M9NTH6, UniRef:UniRef90_M9NTH6 contig_1 cds 2130104 2130286 + GCA000560365_02098 Phage protein RefSeq:WP_000705246.1, SO:0001217, UniParc:UPI00015FD6D3, UniRef:UniRef100_A0A0H3U4Z4, UniRef:UniRef50_A4ZF71, UniRef:UniRef90_M9NSW6 contig_1 cds 2130364 2131077 + GCA000560365_02099 mazF Endoribonuclease MazF RefSeq:WP_001549185.1, SO:0001217, UniParc:UPI0000696C9F, UniRef:UniRef100_C8CGX3, UniRef:UniRef50_A0A2C9TLD0, UniRef:UniRef90_A0A2C9TLD0 contig_1 cds 2131268 2132305 + GCA000560365_02100 Integrase RefSeq:WP_000857199.1, SO:0001217, UniParc:UPI0000696CA0, UniRef:UniRef100_A0A5A8VGL6, UniRef:UniRef90_Q38460 contig_1 cds 2132362 2133186 + GCA000560365_02101 sph sphingomyelin phosphodiesterase EC:3.1.4.12, GO:0004767, RefSeq:WP_000283440.1, SO:0001217, UniParc:UPI00000D9F09, UniRef:UniRef100_A0A1P8L6H7, UniRef:UniRef50_Q2FWP1, UniRef:UniRef90_A0A0Q0XKP0 contig_1 cds 2133424 2134440 - GCA000560365_02102 lukG bi-component leukocidin LukGH subunit G BlastRules:WP_000595324, GO:0005576, GO:0051715, RefSeq:WP_000595324.1, SO:0001217, UniParc:UPI0000696CA1, UniRef:UniRef100_Q2FWP0, UniRef:UniRef50_Q2FWP0, UniRef:UniRef90_Q2FWP0 contig_1 cds 2134462 2135517 - GCA000560365_02103 lukH bi-component leukocidin LukGH subunit H BlastRules:WP_000791407, GO:0005576, GO:0051715, RefSeq:WP_000791407.1, SO:0001217, UniParc:UPI0000052260, UniRef:UniRef100_Q2FWN9, UniRef:UniRef50_Q2FWN9, UniRef:UniRef90_Q2FWN9 contig_1 cds 2135952 2137175 + GCA000560365_02104 dapE putative succinyl-diaminopimelate desuccinylase COG:COG0624, COG:E, EC:3.5.1.18, GO:0009014, GO:0009089, GO:0019877, GO:0046872, RefSeq:WP_000206639.1, SO:0001217, UniParc:UPI0000696CA2, UniRef:UniRef100_A0A1S6BAQ0, UniRef:UniRef50_Q5HKI1, UniRef:UniRef90_Q99SN6 contig_1 cds 2137547 2138392 - GCA000560365_02105 Class I SAM-dependent methyltransferase RefSeq:WP_000812010.1, SO:0001217, UniParc:UPI0000696CA3, UniRef:UniRef100_A0A5A8VID9, UniRef:UniRef50_Q2FWN7, UniRef:UniRef90_Q2FWN7 contig_1 cds 2138454 2139365 - GCA000560365_02106 Fe/B12 periplasmic-binding domain-containing protein RefSeq:WP_000825510.1, SO:0001217, UniParc:UPI0000054230, UniRef:UniRef100_Q2FWN6, UniRef:UniRef50_Q2FWN6, UniRef:UniRef90_Q2FWN6 contig_1 cds 2139526 2140833 + GCA000560365_02107 Na+-transporting ATP synthase RefSeq:WP_001045079.1, SO:0001217, UniParc:UPI0000054232, UniRef:UniRef100_Q2FWN5, UniRef:UniRef50_Q4L3A1, UniRef:UniRef90_A0A8G2I1H9 contig_1 cds 2141686 2142129 - GCA000560365_02108 N-acetyltransferase domain-containing protein RefSeq:WP_000022887.1, SO:0001217, UniParc:UPI00000D9F0D, UniRef:UniRef100_Q2G2N9, UniRef:UniRef50_Q2G2N9, UniRef:UniRef90_Q2G2N9 contig_1 cds 2142294 2142635 - GCA000560365_02109 Membrane protein SO:0001217, UniParc:UPI0001699BC7, UniRef:UniRef100_A0A0E8IM44, UniRef:UniRef50_Q2G2N8, UniRef:UniRef90_Q2G2N8 contig_1 cds 2142989 2143579 - GCA000560365_02110 xtmA Terminase small subunit COG:COG3728, COG:X, RefSeq:WP_001293058.1, SO:0001217, UniParc:UPI0000054235, UniRef:UniRef100_Q2G2N7, UniRef:UniRef50_Q4L4N2, UniRef:UniRef90_Q93CE3 contig_1 cds 2144490 2146106 - GCA000560365_02111 groL chaperonin GroEL COG:COG0459, COG:O, EC:5.6.1.7, GO:0005524, GO:0005737, GO:0016853, GO:0042026, GO:0051082, GO:0140662, RefSeq:WP_000240645.1, SO:0001217, UniParc:UPI00004B5C68, UniRef:UniRef100_Q2FF95, UniRef:UniRef50_Q9KKF0, UniRef:UniRef90_Q08854 contig_1 cds 2146182 2146466 - GCA000560365_02112 groES co-chaperone GroES COG:COG0234, COG:O, GO:0005524, GO:0005737, GO:0044183, GO:0046872, GO:0051082, GO:0051085, GO:0051087, KEGG:K04078, RefSeq:WP_000917289.1, SO:0001217, UniParc:UPI0000000ED6, UniRef:UniRef100_Q2FWN3, UniRef:UniRef50_Q2FWN3, UniRef:UniRef90_Q2FWN3 contig_1 cds 2146641 2147384 + GCA000560365_02113 mroQ intramembrane glutamic endopeptidase MroQ COG:COG1266, COG:O, EC:3.4.-.-, EC:3.4.26.-, GO:0004222, GO:0016020, GO:0071586, RefSeq:WP_000197635.1, SO:0001217, UniParc:UPI0000054238, UniRef:UniRef100_A0A0H2XEK8, UniRef:UniRef50_A0A0H2XEK8, UniRef:UniRef90_A0A0H2XEK8 contig_1 cds 2147409 2148662 - GCA000560365_02114 Membrane anchored protein RefSeq:WP_000120307.1, SO:0001217, UniParc:UPI0000696CA4, UniRef:UniRef100_A0A1S6B2U1, UniRef:UniRef50_A0A2K4AJE0, UniRef:UniRef90_A0A6G4Z6S9 contig_1 cds 2148859 2149485 + GCA000560365_02115 fMR2 Nitroreductase domain-containing protein COG:COG3560, COG:R, KEGG:K07078, RefSeq:WP_000522384.1, SO:0001217, UniParc:UPI000005423C, UniRef:UniRef100_Q2FWN0, UniRef:UniRef50_Q2FWN0, UniRef:UniRef90_Q2FWN0 contig_1 sorf 2149655 2149723 - GCA000560365_02116 nifR Nitrogen fixation protein NifR SO:0001217, UniParc:UPI0004F35BC7, UniRef:UniRef100_A0A7Z1SA60, UniRef:UniRef50_A0A7Z1SA60, UniRef:UniRef90_A0A7Z1SA60 contig_1 cds 2149846 2150631 + GCA000560365_02117 yafV Hydrolase in agr operon COG:COG0388, COG:V, EC:3.5.-.-, GO:0016787, RefSeq:WP_000867960.1, SO:0001217, UniParc:UPI000005423D, UniRef:UniRef100_P55177, UniRef:UniRef50_P0DP65, UniRef:UniRef90_P0DP65 contig_1 ncRNA 2150879 2151392 - GCA000560365_02118 RNAIII RNAIII RFAM:RF00503, SO:0000655 contig_1 cds 2151228 2151362 - GCA000560365_02119 hld delta-hemolysin GO:0005576, GO:0016020, GO:0019836, GO:0020002, GO:0090729, KEGG:K11039, NCBIProtein:AGU62139.1, RefSeq:WP_001549197.1, SO:0001217, UniParc:UPI0000000A3A, UniRef:UniRef100_Q2FWM8, UniRef:UniRef50_Q2FWM8, UniRef:UniRef90_Q2FWM8, VFDB:VFC0235, VFDB:VFG001292 contig_1 cds 2151544 2152167 + GCA000560365_02120 agrB accessory gene regulator AgrB BlastRules:WP_001105707, EC:3.4.-.-, GO:0005886, GO:0006508, GO:0008233, GO:0009372, KEGG:K07813, SO:0001217, UniParc:UPI0000054240, UniRef:UniRef100_D5LFT3, UniRef:UniRef50_Q2FWM7, UniRef:UniRef90_Q2FWM7 contig_1 cds 2152164 2152304 + GCA000560365_02121 agrD AgrD RefSeq:WP_001093929.1, SO:0001217, UniParc:UPI0000054241, UniRef:UniRef100_Q2FWM6, UniRef:UniRef50_Q2FWM6, UniRef:UniRef90_Q2FWM6 contig_1 cds 2152329 2153621 + GCA000560365_02122 agrC quorum-sensing sensor histidine kinase AgrC EC:2.7.13.3, KEGG:K07706, RefSeq:WP_001549202.1, SO:0001217, UniParc:UPI00015FD6DC, UniRef:UniRef100_A0A1E8WWT6, UniRef:UniRef50_Q2FWM5, UniRef:UniRef90_Q2FWM5 contig_1 cds 2153640 2154356 + GCA000560365_02123 agrA quorum-sensing response regulator AgrA COG:COG3279, COG:KT, GO:0000156, GO:0003677, GO:0005737, KEGG:K07707, RefSeq:WP_000688492.1, SO:0001217, UniParc:UPI0000054244, UniRef:UniRef100_Q5HEG2, UniRef:UniRef50_Q5HMY2, UniRef:UniRef90_Q5HEG2 contig_1 cds 2154723 2155682 - GCA000560365_02124 rbsK Carbohydrate kinase COG:COG0524, COG:G, RefSeq:WP_001253312.1, SO:0001217, UniParc:UPI0000054247, UniRef:UniRef100_Q2FWM2, UniRef:UniRef50_A0A0Y9VKF8, UniRef:UniRef90_A0A0Y9VKF8 contig_1 cds 2155679 2157163 - GCA000560365_02125 sacC Sucrose-6-phosphate hydrolase COG:COG1621, COG:G, RefSeq:WP_000141414.1, SO:0001217, UniParc:UPI0000054248, UniRef:UniRef100_Q2FWM1, UniRef:UniRef50_Q05936, UniRef:UniRef90_A0A0H2WWU4 contig_1 cds 2157312 2158262 - GCA000560365_02126 purR Sucrose operon repressor, putative COG:COG1609, COG:K, RefSeq:WP_000790330.1, SO:0001217, UniParc:UPI0000054249, UniRef:UniRef100_Q2FWM0, UniRef:UniRef50_P74892, UniRef:UniRef90_Q2FWM0 contig_1 cds 2158445 2159695 - GCA000560365_02127 amtB Ammonium transporter COG:COG0004, COG:P, KEGG:K03320, RefSeq:WP_001052270.1, SO:0001217, UniParc:UPI00000CAA84, UniRef:UniRef100_Q2FWL9, UniRef:UniRef50_A0A0D0SEH5, UniRef:UniRef90_A0A113YTI9 contig_1 cds 2159903 2160127 - GCA000560365_02128 tusA UPF0033 domain-containing protein COG:COG0425, COG:JHO, RefSeq:WP_000581077.1, SO:0001217, UniParc:UPI00000D9F1B, UniRef:UniRef100_Q2FWL8, UniRef:UniRef50_A0A7U7JQM0, UniRef:UniRef90_A0A7U7JQM0 contig_1 cds 2160187 2161266 - GCA000560365_02129 yedE YeeE/YedE family protein COG:COG2391, COG:R, KEGG:K07112, RefSeq:WP_000266883.1, SO:0001217, UniParc:UPI000005424C, UniRef:UniRef100_Q2FWL7, UniRef:UniRef50_A0A7U7JQE1, UniRef:UniRef90_A0A9P2Z014 contig_1 cds 2161570 2162205 - GCA000560365_02130 rex redox-sensing transcriptional repressor Rex COG:COG2344, COG:K, GO:0003677, GO:0003700, GO:0005737, GO:0045892, GO:0051775, KEGG:K01926, RefSeq:WP_001283612.1, SO:0001217, UniParc:UPI000005424D, UniRef:UniRef100_Q2FWL6, UniRef:UniRef50_Q2FWL6, UniRef:UniRef90_Q2FWL6 contig_1 cds 2162458 2164386 + GCA000560365_02131 abc-f ribosomal protection-like ABC-F family protein COG:COG0488, COG:R, GO:0003677, GO:0005524, GO:0016887, RefSeq:WP_000602049.1, SO:0001217, UniParc:UPI0000696CA7, UniRef:UniRef100_A0A1S6CRE2, UniRef:UniRef50_A0A131I335, UniRef:UniRef90_A0A131I335 contig_1 cds 2164747 2166357 + GCA000560365_02132 mutS MutS domain V protein COG:COG0249, COG:L, RefSeq:WP_000106330.1, SO:0001217, UniParc:UPI000005424F, UniRef:UniRef100_Q2FWL3, UniRef:UniRef50_G5JKS6, UniRef:UniRef90_Q2FWL3 contig_1 cds 2166459 2167484 - GCA000560365_02133 tsaD tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD COG:COG0533, COG:J, EC:2.3.1.234, GO:0002949, GO:0005506, GO:0005737, GO:0061711, RefSeq:WP_000159034.1, SO:0001217, UniParc:UPI0000054250, UniRef:UniRef100_Q2FWL2, UniRef:UniRef50_Q2FWL2, UniRef:UniRef90_Q2FWL2 contig_1 cds 2167477 2167941 - GCA000560365_02134 rimI ribosomal protein S18-alanine N-acetyltransferase COG:COG0456, COG:J, EC:2.3.1.266, GO:0008999, GO:0036211, GO:0042254, RefSeq:WP_000372758.1, SO:0001217, UniParc:UPI00000CAA0A, UniRef:UniRef100_A0A0D6HBI8, UniRef:UniRef50_A0A855GHV1, UniRef:UniRef90_A0A7U7PW89 contig_1 cds 2167914 2168576 - GCA000560365_02135 tsaB tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB COG:COG1214, COG:J, EC:2.3.1.234, GO:0002949, RefSeq:WP_001086744.1, SO:0001217, UniParc:UPI00004B5C6D, UniRef:UniRef100_Q2FWL0, UniRef:UniRef50_A0AAE2ZX37, UniRef:UniRef90_A0AAE2ZX37 contig_1 cds 2168557 2169051 - GCA000560365_02136 tsaE tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE COG:COG0802, COG:J, GO:0002949, SO:0001217, UniParc:UPI0000054254, UniRef:UniRef100_Q2FWK9, UniRef:UniRef50_A0A0D1JSJ2, UniRef:UniRef90_A0A0D1JSJ2 contig_1 ncRNA 2169220 2169424 + GCA000560365_02137 rli60 Listeria sRNA rli60 RFAM:RF02414, SO:0000655 contig_1 cds 2169529 2171217 + GCA000560365_02138 ilvD dihydroxy-acid dehydratase COG:COG0129, COG:EG, EC:4.2.1.9, GO:0000287, GO:0004160, GO:0005829, GO:0009082, GO:0009097, GO:0009099, GO:0051536, GO:0051537, KEGG:K01687, RefSeq:WP_001255791.1, SO:0001217, UniParc:UPI0000696CA8, UniRef:UniRef100_Q2FF71, UniRef:UniRef50_Q2FWK7, UniRef:UniRef90_Q2FWK7 contig_1 cds 2171245 2173014 + GCA000560365_02139 ilvB biosynthetic-type acetolactate synthase large subunit COG:COG0028, COG:EH, EC:2.2.1.6, GO:0000287, GO:0003984, GO:0009082, GO:0030976, GO:0050660, KEGG:K01652, RefSeq:WP_000047820.1, SO:0001217, UniParc:UPI00004B5C70, UniRef:UniRef100_Q2FWK6, UniRef:UniRef50_Q02137, UniRef:UniRef90_A0A0E1XAU7 contig_1 cds 2173014 2173268 + GCA000560365_02140 ilvH ACT domain-containing protein COG:COG0440, COG:E, EC:2.2.1.6, KEGG:K01653, RefSeq:WP_000196911.1, SO:0001217, UniParc:UPI0000054257, UniRef:UniRef100_Q2FWK5, UniRef:UniRef50_A0A7Z8E1T8, UniRef:UniRef90_Q2FWK5 contig_1 cds 2173405 2174409 + GCA000560365_02141 ilvC ketol-acid reductoisomerase COG:COG0059, COG:EH, EC:1.1.1.86, GO:0000287, GO:0004455, GO:0005829, GO:0009097, GO:0009099, GO:0050661, KEGG:K00053, RefSeq:WP_000214557.1, SO:0001217, UniParc:UPI00004B5C71, UniRef:UniRef100_Q2FWK4, UniRef:UniRef50_Q58938, UniRef:UniRef90_Q2FWK4 contig_1 cds 2174439 2175968 + GCA000560365_02142 leuA 2-isopropylmalate synthase COG:COG0119, COG:E, EC:2.3.3.13, GO:0003852, GO:0003985, GO:0005737, GO:0009098, GO:0030145, KEGG:K01649, RefSeq:WP_000094576.1, SO:0001217, UniParc:UPI00004B5C72, UniRef:UniRef100_Q2FWK3, UniRef:UniRef50_P94565, UniRef:UniRef90_Q2FWK3 contig_1 cds 2175971 2177017 + GCA000560365_02143 leuB 3-isopropylmalate dehydrogenase COG:CE, COG:COG0473, EC:1.1.1.85, GO:0000287, GO:0003862, GO:0005829, GO:0009098, GO:0051287, KEGG:K00052, RefSeq:WP_000221958.1, SO:0001217, UniParc:UPI00004B5C73, UniRef:UniRef100_Q2FF66, UniRef:UniRef50_P12010, UniRef:UniRef90_Q2FWK2 contig_1 cds 2177031 2178401 + GCA000560365_02144 leuC 3-isopropylmalate dehydratase large subunit COG:COG0065, COG:E, EC:4.2.1.33, GO:0003861, GO:0009098, GO:0046872, GO:0051539, KEGG:K01703, RefSeq:WP_000531823.1, SO:0001217, UniParc:UPI000005425B, UniRef:UniRef100_Q2FWK1, UniRef:UniRef50_P80858, UniRef:UniRef90_Q2FWK1 contig_1 cds 2178402 2178974 + GCA000560365_02145 leuD 3-isopropylmalate dehydratase small subunit COG:COG0066, COG:E, EC:4.2.1.33, GO:0003861, GO:0009098, GO:0009316, RefSeq:WP_000718955.1, SO:0001217, UniParc:UPI000005425E, UniRef:UniRef100_Q2FWK0, UniRef:UniRef50_Q8Y5R6, UniRef:UniRef90_Q2FWK0 contig_1 cds 2178989 2180257 + GCA000560365_02146 ilvA threonine ammonia-lyase IlvA COG:COG1171, COG:E, EC:4.3.1.19, GO:0003941, GO:0004794, GO:0006520, GO:0006565, GO:0006566, GO:0006567, GO:0009097, GO:0030170, RefSeq:WP_000216853.1, SO:0001217, UniParc:UPI00004B5C74, UniRef:UniRef100_Q2FWJ9, UniRef:UniRef50_P37946, UniRef:UniRef90_Q2FWJ9 contig_1 rRNA 2180467 2180581 - GCA000560365_02147 rrf 5S ribosomal RNA GO:0003735, GO:0005840, KEGG:K01985, RFAM:RF00001, SO:0000652 contig_1 rRNA 2180654 2183576 - GCA000560365_02148 rrl 23S ribosomal RNA GO:0003735, GO:0005840, KEGG:K01980, RFAM:RF02541, SO:0001001 contig_1 rRNA 2183881 2185432 - GCA000560365_02149 rrs 16S ribosomal RNA GO:0003735, GO:0005840, KEGG:K01977, RFAM:RF00177, SO:0001000 contig_1 tRNA 2185551 2185624 - GCA000560365_02150 trnG tRNA-Gly(tcc) SO:0000260 contig_1 tRNA 2185647 2185729 - GCA000560365_02151 trnL tRNA-Leu(gag) SO:0000264 contig_1 cds 2186376 2186831 - GCA000560365_02152 sprT SprT family protein COG:COG3091, COG:R, GO:0005737, GO:0008270, GO:0033554, RefSeq:WP_001058111.1, SO:0001217, UniParc:UPI00000D7726, UniRef:UniRef100_Q2FWJ6, UniRef:UniRef50_Q8Y8K2, UniRef:UniRef90_Q2FWJ6 contig_1 cds 2186824 2188962 - GCA000560365_02153 tex S1 motif domain-containing protein COG:COG2183, COG:K, KEGG:K06959, SO:0001217, UniParc:UPI0002CAED2A, UniRef:UniRef100_A0A2X3PSQ1, UniRef:UniRef50_A0A1M6SVE8, UniRef:UniRef90_A0A0H3JYF6 contig_1 cds 2189408 2190178 - GCA000560365_02154 sigB RNA polymerase sigma factor SigB COG:COG1191, COG:K, GO:0003700, GO:0006352, GO:0016987, KEGG:K03090, RefSeq:WP_001041103.1, SO:0001217, UniParc:UPI00000545BC, UniRef:UniRef100_Q2FWJ4, UniRef:UniRef50_P06574, UniRef:UniRef90_A0A390QYZ6 contig_1 cds 2190153 2190632 - GCA000560365_02155 rsbW anti-sigma B factor RsbW COG:COG2172, COG:T, EC:2.7.11.1, GO:0004674, GO:0004676, GO:0004677, GO:0004679, GO:0004711, GO:0005524, GO:0006468, GO:0016989, GO:0035175, GO:0035402, GO:0035403, GO:0035979, GO:0044022, GO:0044023, GO:0044024, GO:0044025, GO:0045892, GO:0072354, GO:0072371, GO:0072518, GO:0106310, GO:0140823, GO:0140855, GO:0140857, GO:1990244, RefSeq:WP_001190829.1, SO:0001217, UniParc:UPI00000D4737, UniRef:UniRef100_Q2FWJ3, UniRef:UniRef50_P17904, UniRef:UniRef90_Q2FWJ3 contig_1 cds 2190634 2190960 - GCA000560365_02156 rsbV Anti-sigma-B factor antagonist COG:COG5815, COG:DT, GO:0043856, RefSeq:WP_001052491.1, SO:0001217, UniParc:UPI00000545BE, UniRef:UniRef100_P60070, UniRef:UniRef50_P60070, UniRef:UniRef90_P60070 contig_1 cds 2191079 2192080 - GCA000560365_02157 rsbU RsbU COG:COG2208, COG:TK, RefSeq:WP_000390829.1, SO:0001217, UniParc:UPI00000D76B3, UniRef:UniRef100_A0A7Z7R0V7, UniRef:UniRef50_S2XRQ7, UniRef:UniRef90_A0A2K4AFK3 contig_1 cds 2192430 2192792 - GCA000560365_02158 mazF Endoribonuclease MazF COG:COG2337, COG:V, EC:3.1.-.-, GO:0003677, GO:0003723, GO:0004521, GO:0006402, GO:0016075, RefSeq:WP_000621175.1, SO:0001217, UniParc:UPI00000545C1, UniRef:UniRef100_Q2FWI8, UniRef:UniRef50_Q2FWI8, UniRef:UniRef90_Q2FWI8 contig_1 cds 2192789 2192959 - GCA000560365_02159 mazE type II toxin-antitoxin system antitoxin MazE BlastRules:WP_000948331, BlastRules:WP_001829931, BlastRules:WP_011275271, BlastRules:WP_011302702, GO:0006355, RefSeq:WP_000948331.1, SO:0001217, UniParc:UPI00000D780C, UniRef:UniRef100_Q2FWI7, UniRef:UniRef50_Q2FWI7, UniRef:UniRef90_Q2FWI7 contig_1 cds 2193044 2194192 - GCA000560365_02160 alr alanine racemase COG:COG0787, COG:M, EC:5.1.1.1, GO:0005829, GO:0006522, GO:0008784, GO:0009252, GO:0030170, GO:0030632, KEGG:K01775, RefSeq:WP_001281145.1, SO:0001217, UniParc:UPI00001258C9, UniRef:UniRef100_Q9ZAH5, UniRef:UniRef50_P63479, UniRef:UniRef90_P63479 contig_1 cds 2194258 2194617 - GCA000560365_02161 acpS Holo-[acyl-carrier-protein] synthase COG:COG0736, COG:I, EC:2.7.8.7, GO:0000287, GO:0005737, GO:0006633, GO:0008897, RefSeq:WP_000581200.1, SO:0001217, UniParc:UPI00000545C5, UniRef:UniRef100_Q9ZAH6, UniRef:UniRef50_Q9ZAH6, UniRef:UniRef90_Q9ZAH6 contig_1 cds 2194621 2195115 - GCA000560365_02162 ydbS YdbS-like PH domain-containing protein COG:COG3402, COG:S, SO:0001217, UniParc:UPI00000BE51F, UniRef:UniRef100_Q2FWI4, UniRef:UniRef50_Q2FWI4, UniRef:UniRef90_Q2FWI4 contig_1 cds 2195099 2196682 - GCA000560365_02163 ydbT YdbS-like PH domain-containing protein COG:COG3428, COG:S, KEGG:K08981, RefSeq:WP_001294626.1, SO:0001217, UniParc:UPI00000D77B0, UniRef:UniRef100_Q2FWI3, UniRef:UniRef50_A0A2K4AEP0, UniRef:UniRef90_Q2FWI3 contig_1 cds 2196675 2197154 - GCA000560365_02164 ydbS YdbS-like PH domain-containing protein COG:COG3402, COG:S, RefSeq:WP_001287088.1, SO:0001217, UniParc:UPI00000545C8, UniRef:UniRef100_Q2FWI2, UniRef:UniRef50_Q2FWI2, UniRef:UniRef90_Q2FWI2 contig_1 cds 2197362 2197922 - GCA000560365_02165 kdpC K(+)-transporting ATPase subunit C COG:COG2156, COG:P, GO:0005524, GO:0005886, GO:0008556, GO:0071805, RefSeq:WP_001092411.1, SO:0001217, UniParc:UPI00000CADC0, UniRef:UniRef100_Q2FWI1, UniRef:UniRef50_Q2FWI1, UniRef:UniRef90_Q2FWI1 contig_1 cds 2197942 2199969 - GCA000560365_02166 kdpB potassium-transporting ATPase subunit KdpB COG:COG2216, COG:P, EC:7.2.2.6, GO:0000287, GO:0005524, GO:0005886, GO:0006813, GO:0008556, GO:0016020, GO:0016887, GO:0031004, RefSeq:WP_000546584.1, SO:0001217, UniParc:UPI00004B5C77, UniRef:UniRef100_Q5HEC4, UniRef:UniRef50_P63683, UniRef:UniRef90_P63683 contig_1 cds 2199988 2201664 - GCA000560365_02167 kdpA potassium-transporting ATPase subunit KdpA COG:COG2060, COG:P, EC:7.2.2.6, GO:0005886, GO:0006813, GO:0008556, GO:0030955, GO:0031004, KEGG:K01546, RefSeq:WP_000402656.1, SO:0001217, UniParc:UPI00004B5C78, UniRef:UniRef100_Q2FWH9, UniRef:UniRef50_Q2FWH9, UniRef:UniRef90_Q2FWH9 contig_1 cds 2201936 2204593 + GCA000560365_02168 kdpD Sensor histidine kinase KdpD COG:COG2205, COG:T, EC:2.7.13.3, GO:0000155, GO:0005524, GO:0005886, RefSeq:WP_000072278.1, SO:0001217, UniParc:UPI00000CA9CF, UniRef:UniRef100_Q2FWH7, UniRef:UniRef50_Q2FWH7, UniRef:UniRef90_Q2FWH7 contig_1 cds 2204593 2205288 + GCA000560365_02169 kdpE Transcriptional regulatory protein KdpE COG:COG0745, COG:TK, GO:0000156, GO:0000976, GO:0005829, GO:0006355, GO:0032993, RefSeq:WP_001190841.1, SO:0001217, UniParc:UPI00000545CE, UniRef:UniRef100_Q2FWH6, UniRef:UniRef50_Q2FWH6, UniRef:UniRef90_Q2FWH6 contig_1 cds 2205657 2207177 - GCA000560365_02170 cshA DEAD-box ATP-dependent RNA helicase CshA COG:COG0513, COG:L, EC:3.6.4.13, GO:0003689, GO:0003724, GO:0005524, GO:0005829, GO:0005840, GO:0006401, GO:0009409, GO:0010501, GO:0016887, GO:0033592, GO:0061775, GO:0140584, GO:0140665, GO:0140849, RefSeq:WP_001178942.1, SO:0001217, UniParc:UPI00000D7761, UniRef:UniRef100_Q2FWH5, UniRef:UniRef50_Q2FWH5, UniRef:UniRef90_Q2FWH5 contig_1 cds 2207694 2209052 - GCA000560365_02171 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase COG:COG0770, COG:M, EC:6.3.2.10, GO:0005524, GO:0005737, GO:0008360, GO:0008766, GO:0009252, GO:0047480, GO:0051301, GO:0071555, KEGG:K01929, RefSeq:WP_000611462.1, SO:0001217, UniParc:UPI0000696CAB, UniRef:UniRef100_A0A0E8J639, UniRef:UniRef50_Q2FWH4, UniRef:UniRef90_Q2FWH4 contig_1 cds 2209067 2210137 - GCA000560365_02172 ddl D-alanine--D-alanine ligase COG:COG1181, COG:MR, EC:6.3.2.4, GO:0005524, GO:0005829, GO:0008360, GO:0008716, GO:0009252, GO:0046872, GO:0071555, RefSeq:WP_000159631.1, SO:0001217, UniParc:UPI00001290BE, UniRef:UniRef100_Q2FWH3, UniRef:UniRef50_Q8NVH8, UniRef:UniRef90_Q8NVH8 contig_1 cds 2210455 2211657 + GCA000560365_02173 ftsW Rod shape-determining protein RodA COG:COG0772, COG:D, KEGG:K05837, RefSeq:WP_001109939.1, SO:0001217, UniParc:UPI00000545D2, UniRef:UniRef100_Q2FWH2, UniRef:UniRef50_Q2FWH2, UniRef:UniRef90_Q2FWH2 contig_1 cds 2211921 2212058 - GCA000560365_02174 Lmo0850 family protein RefSeq:WP_000828354.1, SO:0001217, UniParc:UPI00000D7764, UniRef:UniRef100_Q2FWH1, UniRef:UniRef50_A0A0H2VHK0, UniRef:UniRef90_Q2FWH1 contig_1 cds 2212186 2212395 - GCA000560365_02175 csoZ putative copper chaperone CsoZ RefSeq:WP_000581792.1, SO:0001217, UniParc:UPI00000545D4, UniRef:UniRef100_Q2FWH0, UniRef:UniRef50_Q2FWH0, UniRef:UniRef90_Q2FWH0 contig_1 cds 2212407 2212700 - GCA000560365_02176 csoR copper-sensing transcriptional repressor CsoR BlastRules:WP_000138932, COG:COG1937, COG:K, KEGG:K21600, RefSeq:WP_000138932.1, SO:0001217, UniParc:UPI00000D7670, UniRef:UniRef100_Q2FWG9, UniRef:UniRef50_K9AII0, UniRef:UniRef90_Q2FWG9 contig_1 cds 2212866 2214350 + GCA000560365_02177 cls cardiolipin synthase Cls COG:COG1502, COG:I, EC:2.7.8.-, GO:0005886, GO:0008808, GO:0016780, GO:0032049, KEGG:K06131, RefSeq:WP_000571549.1, SO:0001217, UniParc:UPI00000D778F, UniRef:UniRef100_Q5HEB2, UniRef:UniRef50_Q8Y4E3, UniRef:UniRef90_Q5HEB2 contig_1 cds 2214378 2215025 + GCA000560365_02178 rnaY HD domain-containing protein COG:COG1418, COG:JR, KEGG:K06950, RefSeq:WP_001187629.1, SO:0001217, UniParc:UPI00004B5C7B, UniRef:UniRef100_Q2FWG7, UniRef:UniRef50_Q2FWG7, UniRef:UniRef90_Q2FWG7 contig_1 cds 2215838 2216710 - GCA000560365_02179 yidC Membrane protein insertase YidC COG:COG0706, COG:M, GO:0005886, GO:0015031, GO:0032977, GO:0051205, KEGG:K03217, RefSeq:WP_000725802.1, SO:0001217, UniParc:UPI00000522A6, UniRef:UniRef100_Q2FWG4, UniRef:UniRef50_Q8CMK8, UniRef:UniRef90_Q2FWG4 contig_1 cds 2216796 2217437 - GCA000560365_02180 thiE Thiamine-phosphate synthase COG:COG0352, COG:H, EC:2.5.1.3, GO:0000287, GO:0004789, GO:0005737, GO:0009228, GO:0009229, RefSeq:WP_000483153.1, SO:0001217, UniParc:UPI0000136DDF, UniRef:UniRef100_Q2FWG3, UniRef:UniRef50_Q5HMD0, UniRef:UniRef90_Q2FWG3 contig_1 cds 2217439 2218230 - GCA000560365_02181 thiM hydroxyethylthiazole kinase COG:COG2145, COG:H, EC:2.7.1.50, GO:0000287, GO:0004417, GO:0005524, GO:0009228, GO:0009229, RefSeq:WP_001108479.1, SO:0001217, UniParc:UPI00000545DE, UniRef:UniRef100_Q2FWG2, UniRef:UniRef50_Q6GEY3, UniRef:UniRef90_Q6GEY3 contig_1 cds 2218214 2219044 - GCA000560365_02182 thiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase COG:COG0351, COG:H, EC:2.7.1.49, EC:2.7.4.7, GO:0005524, GO:0005829, GO:0008902, GO:0008972, GO:0009228, GO:0009229, RefSeq:WP_000594959.1, SO:0001217, UniParc:UPI00000545DF, UniRef:UniRef100_Q2FWG1, UniRef:UniRef50_P66915, UniRef:UniRef90_P66915 contig_1 cds 2219037 2219726 - GCA000560365_02183 tenA thiaminase II COG:COG0819, COG:H, EC:3.5.99.2, GO:0005829, GO:0006772, GO:0009228, GO:0009229, GO:0050334, RefSeq:WP_000396077.1, SO:0001217, UniParc:UPI00000D76DB, UniRef:UniRef100_Q2FF32, UniRef:UniRef50_Q6GEY1, UniRef:UniRef90_Q6GEY1 contig_1 ncRNA-region 2219806 2219908 - TPP riboswitch aptamer (THI element) RFAM:RF00059, SO:0000035 contig_1 cds 2220112 2220807 - GCA000560365_02184 sceD lytic transglycosylase SceD BlastRules:WP_000752009, EC:3.2.-.-, GO:0005576, GO:0016798, RefSeq:WP_000752008.1, SO:0001217, UniParc:UPI00000545E2, UniRef:UniRef100_Q2FWF8, UniRef:UniRef50_Q2FWF8, UniRef:UniRef90_Q2FWF8 contig_1 cds 2221244 2221591 - GCA000560365_02185 ssb Single-stranded DNA-binding protein COG:COG0629, COG:L, SO:0001217, UniParc:UPI0000696CAD, UniRef:UniRef100_Q2FWF7, UniRef:UniRef50_K9AX51, UniRef:UniRef90_A0A7U7PX14 contig_1 cds 2221785 2222225 + GCA000560365_02186 ywpF YwpF protein RefSeq:WP_000846746.1, SO:0001217, UniParc:UPI00000D77B6, UniRef:UniRef100_Q2FWF6, UniRef:UniRef50_Q2FWF6, UniRef:UniRef90_Q2FWF6 contig_1 cds 2222284 2222724 - GCA000560365_02187 fabZ 3-hydroxyacyl-ACP dehydratase FabZ COG:COG0764, COG:I, EC:4.2.1.59, GO:0005737, GO:0006633, GO:0009245, GO:0016020, GO:0019171, KEGG:K02372, RefSeq:WP_000447678.1, SO:0001217, UniParc:UPI00000545E6, UniRef:UniRef100_Q2FWF5, UniRef:UniRef50_Q2FWF5, UniRef:UniRef90_Q2FWF5 contig_1 cds 2222758 2224023 - GCA000560365_02188 murA UDP-N-acetylglucosamine 1-carboxyvinyltransferase EC:2.5.1.7, GO:0008760, GO:0019277, KEGG:K00790, RefSeq:WP_000358000.1, SO:0001217, UniParc:UPI0000696CAE, UniRef:UniRef100_A0A0E8J2T6, UniRef:UniRef50_P33986, UniRef:UniRef90_A0A0E8J2T6 contig_1 cds 2224134 2224367 - GCA000560365_02189 ywzB DUF1146 domain-containing protein COG:COG4836, COG:S, RefSeq:WP_000384523.1, SO:0001217, UniParc:UPI00000545E8, UniRef:UniRef100_Q2FWF3, UniRef:UniRef50_Q2FWF3, UniRef:UniRef90_Q2FWF3 contig_1 cds 2224929 2225333 - GCA000560365_02190 atpC F0F1 ATP synthase subunit epsilon COG:C, COG:COG0355, EC:7.1.2.2, GO:0005524, GO:0005886, GO:0015986, GO:0045261, GO:0046933, RefSeq:WP_001094394.1, SO:0001217, UniParc:UPI00000545E9, UniRef:UniRef100_Q2FWF1, UniRef:UniRef50_Q8CNJ8, UniRef:UniRef90_Q2FWF1 contig_1 cds 2225353 2226765 - GCA000560365_02191 atpD F0F1 ATP synthase subunit beta COG:C, COG:COG0055, EC:7.1.2.2, GO:0005524, GO:0005886, GO:0015986, GO:0016887, GO:0045261, GO:0046933, GO:0046961, RefSeq:WP_000511135.1, SO:0001217, UniParc:UPI00000545EA, UniRef:UniRef100_Q2FWF0, UniRef:UniRef50_P50002, UniRef:UniRef90_Q2FWF0 contig_1 cds 2226787 2227653 - GCA000560365_02192 atpG ATP synthase F1 subunit gamma COG:C, COG:COG0224, EC:7.1.2.2, GO:0005524, GO:0005886, GO:0015986, GO:0042777, GO:0045261, GO:0046933, KEGG:K02115, RefSeq:WP_000157603.1, SO:0001217, UniParc:UPI00000D76D5, UniRef:UniRef100_Q5HE96, UniRef:UniRef50_Q49Z51, UniRef:UniRef90_Q5HE96 contig_1 cds 2227684 2229192 - GCA000560365_02193 atpA F0F1 ATP synthase subunit alpha COG:C, COG:COG0056, EC:7.1.2.2, GO:0005524, GO:0005886, GO:0015986, GO:0043531, GO:0045261, GO:0046933, GO:0046961, RefSeq:WP_000974881.1, SO:0001217, UniParc:UPI00000545EC, UniRef:UniRef100_Q2FWE8, UniRef:UniRef50_P26679, UniRef:UniRef90_Q2FWE8 contig_1 cds 2229214 2229753 - GCA000560365_02194 atpH F0F1 ATP synthase subunit delta COG:C, COG:COG0712, EC:7.1.2.2, GO:0005886, GO:0045261, GO:0046933, RefSeq:WP_000241351.1, SO:0001217, UniParc:UPI00000545ED, UniRef:UniRef100_Q2FWE7, UniRef:UniRef50_Q2FWE7, UniRef:UniRef90_Q2FWE7 contig_1 cds 2229753 2230274 - GCA000560365_02195 atpF F0F1 ATP synthase subunit B COG:C, COG:COG0711, GO:0005886, GO:0045263, GO:0046933, GO:0046961, RefSeq:WP_000140679.1, SO:0001217, UniParc:UPI00000D78AB, UniRef:UniRef100_Q2G2F8, UniRef:UniRef50_Q49Z54, UniRef:UniRef90_Q6GEW8 contig_1 cds 2230472 2230684 - GCA000560365_02196 atpE F0F1 ATP synthase subunit C COG:C, COG:COG0636, EC:7.1.2.2, GO:0005886, GO:0008289, GO:0015078, GO:0015986, GO:0045263, GO:0046933, RefSeq:WP_001048816.1, SO:0001217, UniParc:UPI00000545F0, UniRef:UniRef100_Q2G2F6, UniRef:UniRef50_P37815, UniRef:UniRef90_Q2G2F6 contig_1 cds 2230727 2231455 - GCA000560365_02197 atpB F0F1 ATP synthase subunit A COG:C, COG:COG0356, EC:7.1.2.2, GO:0005886, GO:0015078, GO:0015986, GO:0042777, GO:0045263, GO:0046933, KEGG:K02108, RefSeq:WP_000349655.1, SO:0001217, UniParc:UPI00000545F1, UniRef:UniRef100_Q2G2F4, UniRef:UniRef50_Q2G2F4, UniRef:UniRef90_Q2G2F4 contig_1 cds 2231476 2231829 - GCA000560365_02198 ATP synthase protein I SO:0001217, UniParc:UPI00000545F2, UniRef:UniRef100_A0A7U7EZC5, UniRef:UniRef50_A0A0U1MR76, UniRef:UniRef90_A0A7U7EZC5 contig_1 cds 2231996 2233123 - GCA000560365_02199 wecB non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase COG:COG0381, COG:M, EC:5.1.3.14, GO:0008761, KEGG:K01791, RefSeq:WP_000723418.1, SO:0001217, UniParc:UPI00000BB0B7, UniRef:UniRef100_Q2G2F5, UniRef:UniRef50_A0A2Y8PHC9, UniRef:UniRef90_A0A2Y8PHC9 contig_1 cds 2233147 2233776 - GCA000560365_02200 upp uracil phosphoribosyltransferase COG:COG0035, COG:F, EC:2.4.2.9, GO:0000287, GO:0004845, GO:0005525, GO:0006223, GO:0009116, GO:0044206, RefSeq:WP_000048712.1, SO:0001217, UniParc:UPI00000545F4, UniRef:UniRef100_Q2FWE6, UniRef:UniRef50_Q9RU32, UniRef:UniRef90_Q2FWE6 contig_1 cds 2233804 2235042 - GCA000560365_02201 glyA Serine hydroxymethyltransferase COG:COG0112, COG:E, EC:2.1.2.1, GO:0004372, GO:0005829, GO:0019264, GO:0030170, GO:0035999, KEGG:K00600, RefSeq:WP_000120500.1, SO:0001217, UniParc:UPI0000696CB0, UniRef:UniRef100_Q2FF15, UniRef:UniRef50_Q2FWE5, UniRef:UniRef90_Q2FWE5 contig_1 cds 2235069 2235593 - GCA000560365_02202 ywlG UPF0340 protein SAR2202 COG:COG4475, COG:S, RefSeq:WP_000654185.1, SO:0001217, UniParc:UPI00000545F6, UniRef:UniRef100_Q2FWE4, UniRef:UniRef50_Q2FWE4, UniRef:UniRef90_Q2FWE4 contig_1 cds 2235700 2236119 - GCA000560365_02203 ptpB Low molecular weight protein-tyrosine-phosphatase PtpB COG:COG0394, COG:T, EC:3.1.3.48, GO:0004726, GO:0030946, GO:0140793, RefSeq:WP_000697334.1, SO:0001217, UniParc:UPI000004740C, UniRef:UniRef100_Q2FWE3, UniRef:UniRef50_Q2FWE3, UniRef:UniRef90_Q2FWE3 contig_1 cds 2236116 2237162 - GCA000560365_02204 tsaC L-threonylcarbamoyladenylate synthase COG:COG0009, COG:J, EC:2.7.7.87, GO:0003725, GO:0006400, GO:0061710, RefSeq:WP_000379888.1, SO:0001217, UniParc:UPI0000696CB1, UniRef:UniRef100_A0A0D3QBK7, UniRef:UniRef50_A0A6K1LH12, UniRef:UniRef90_A0A6K1LH12 contig_1 cds 2237246 2238082 - GCA000560365_02205 prmC peptide chain release factor N(5)-glutamine methyltransferase COG:COG2890, COG:J, EC:2.1.1.297, GO:0003676, GO:0006412, GO:0006415, GO:0008757, GO:0018364, GO:0032259, GO:0036009, GO:0102559, RefSeq:WP_000248735.1, SO:0001217, UniParc:UPI00000545F8, UniRef:UniRef100_Q2FWE1, UniRef:UniRef50_Q2FWE1, UniRef:UniRef90_Q2FWE1 contig_1 cds 2238069 2239145 - GCA000560365_02206 prfA peptide chain release factor 1 COG:COG0216, COG:J, GO:0005737, GO:0006415, GO:0016149, KEGG:K02835, RefSeq:WP_000460242.1, SO:0001217, UniParc:UPI0000133750, UniRef:UniRef100_Q2FWE0, UniRef:UniRef50_B9DS45, UniRef:UniRef90_Q2FWE0 contig_1 cds 2239146 2239745 - GCA000560365_02207 tdk thymidine kinase COG:COG1435, COG:F, EC:2.7.1.21, GO:0004797, GO:0005524, GO:0005829, GO:0008270, GO:0046104, GO:0071897, KEGG:K00857, RefSeq:WP_000273356.1, SO:0001217, UniParc:UPI00000D9F35, UniRef:UniRef100_Q2FF09, UniRef:UniRef50_Q5KUH1, UniRef:UniRef90_Q2FF09 contig_1 cds 2240092 2240346 - GCA000560365_02208 rpmE2 type B 50S ribosomal protein L31 COG:COG0254, COG:J, GO:0003735, GO:0005840, GO:0006412, GO:1990904, RefSeq:WP_000808968.1, SO:0001217, UniParc:UPI00000545FB, UniRef:UniRef100_Q2FWD8, UniRef:UniRef50_Q5HMA2, UniRef:UniRef90_Q5HMA2 contig_1 cds 2240464 2241780 - GCA000560365_02209 rho transcription termination factor Rho COG:COG1158, COG:K, EC:3.6.4.-, GO:0003723, GO:0005524, GO:0006353, GO:0008186, KEGG:K03628, RefSeq:WP_001115101.1, SO:0001217, UniParc:UPI00000D7733, UniRef:UniRef100_A0A133PU93, UniRef:UniRef50_A0A2D6ZY33, UniRef:UniRef90_A0A133PU93 contig_1 cds 2242027 2243454 - GCA000560365_02210 adhE Putative aldehyde dehydrogenase COG:COG1012, COG:I, EC:1.2.1.3, GO:0004029, GO:0006081, RefSeq:WP_001206093.1, SO:0001217, UniParc:UPI00000CA95D, UniRef:UniRef100_Q2FWD6, UniRef:UniRef50_Q4L803, UniRef:UniRef90_Q2FWD6 contig_1 cds 2243692 2244027 - GCA000560365_02211 hxlR HTH hxlR-type domain-containing protein COG:COG1733, COG:K, RefSeq:WP_000451438.1, SO:0001217, UniParc:UPI00004B5C7F, UniRef:UniRef100_A0AA43V3D6, UniRef:UniRef50_B9DMD6, UniRef:UniRef90_A0A7U7PWB3 contig_1 cds 2244116 2245375 - GCA000560365_02212 murA2 UDP-N-acetylglucosamine 1-carboxyvinyltransferase COG:COG0766, COG:M, EC:2.5.1.7, GO:0005737, GO:0008360, GO:0008760, GO:0009252, GO:0019277, GO:0051301, GO:0071555, KEGG:K00790, RefSeq:WP_000046602.1, SO:0001217, UniParc:UPI00000545FF, UniRef:UniRef100_Q5HE76, UniRef:UniRef50_P19670, UniRef:UniRef90_Q6GEV1 contig_1 cds 2245841 2246701 - GCA000560365_02213 fba class II fructose-bisphosphate aldolase COG:COG0191, COG:G, EC:4.1.2.13, GO:0004332, GO:0006096, GO:0008270, GO:0030388, KEGG:K01624, RefSeq:WP_001131841.1, SO:0001217, UniParc:UPI00000D7773, UniRef:UniRef100_Q5HE75, UniRef:UniRef50_P94453, UniRef:UniRef90_Q5HM97 contig_1 cds 2246919 2247440 + GCA000560365_02214 DUF2529 domain-containing protein RefSeq:WP_000036005.1, SO:0001217, UniParc:UPI0000054601, UniRef:UniRef100_Q2FWD2, UniRef:UniRef50_Q2FWD2, UniRef:UniRef90_Q2FWD2 contig_1 cds 2247549 2249159 - GCA000560365_02215 pyrG CTP synthase COG:COG0504, COG:F, EC:6.3.4.2, GO:0003883, GO:0004359, GO:0005524, GO:0005829, GO:0006221, GO:0006241, GO:0019856, GO:0042802, GO:0044210, GO:0046872, RefSeq:WP_000159960.1, SO:0001217, UniParc:UPI0000132D80, UniRef:UniRef100_Q2FF01, UniRef:UniRef50_Q8Y495, UniRef:UniRef90_Q2FWD1 contig_1 ncRNA 2249378 2249447 - GCA000560365_02216 tsr31 S. aureus tsr31 small RNA RFAM:RF02580, SO:0000655 contig_1 cds 2249495 2250025 - GCA000560365_02217 rpoE DNA-directed RNA polymerase subunit delta COG:COG3343, COG:K, EC:2.7.7.6, GO:0000428, GO:0003899, GO:0006351, GO:0006355, KEGG:K03048, RefSeq:WP_000701483.1, SO:0001217, UniParc:UPI0000054604, UniRef:UniRef100_Q2FWD0, UniRef:UniRef50_Q2FWD0, UniRef:UniRef90_Q2FWD0 contig_1 cds 2250137 2250997 - GCA000560365_02218 rimL N-acetyltransferase domain-containing protein COG:COG1670, COG:JO, RefSeq:WP_001040736.1, SO:0001217, UniParc:UPI0000054605, UniRef:UniRef100_Q2FWC9, UniRef:UniRef50_Q2FWC9, UniRef:UniRef90_Q2FWC9 contig_1 cds 2251421 2252224 + GCA000560365_02219 coaW type II pantothenate kinase COG:COG5146, COG:H, EC:2.7.1.33, GO:0004594, GO:0005524, GO:0005829, GO:0015937, RefSeq:WP_000862727.1, SO:0001217, UniParc:UPI0000054606, UniRef:UniRef100_Q2FWC7, UniRef:UniRef50_Q2FWC7, UniRef:UniRef90_Q2FWC7 contig_1 cds 2252354 2253025 - GCA000560365_02220 DUF2750 domain-containing protein RefSeq:WP_000120549.1, SO:0001217, UniParc:UPI0000054607, UniRef:UniRef100_Q2FWC6, UniRef:UniRef50_Q2FWC6, UniRef:UniRef90_Q2FWC6 contig_1 cds 2253424 2254617 - GCA000560365_02221 accC L-aspartate--L-methionine ligase COG:COG0439, COG:I, EC:6.3.2.-, GO:0000096, GO:0000287, GO:0005524, GO:0006555, GO:0016881, GO:0034026, GO:0042802, GO:0042803, GO:1901605, KEGG:K27344, RefSeq:WP_000183726.1, SO:0001217, UniParc:UPI0000054608, UniRef:UniRef100_Q2FWC5, UniRef:UniRef50_Q2FWC5, UniRef:UniRef90_Q2FWC5 contig_1 cds 2254617 2255801 - GCA000560365_02222 abgB Peptidase M20 domain-containing protein 2 COG:COG1473, COG:R, RefSeq:WP_001291500.1, SO:0001217, UniParc:UPI00000522DD, UniRef:UniRef100_Q2FWC4, UniRef:UniRef50_Q79EU8, UniRef:UniRef90_Q79EU8 contig_1 cds 2256112 2256582 + GCA000560365_02223 luxS S-ribosylhomocysteine lyase COG:COG1854, COG:T, EC:4.4.1.21, GO:0005506, GO:0009372, GO:0043768, KEGG:K07173, RefSeq:WP_000164421.1, SO:0001217, UniParc:UPI0000054609, UniRef:UniRef100_Q2FWC3, UniRef:UniRef50_Q9ZMW8, UniRef:UniRef90_Q2FWC3 contig_1 cds 2256734 2257084 - GCA000560365_02224 doxX DoxX family membrane protein COG:COG4270, COG:R, RefSeq:WP_001024035.1, SO:0001217, UniParc:UPI00000CAC3B, UniRef:UniRef100_Q2FWC2, UniRef:UniRef50_B9DJX6, UniRef:UniRef90_Q2FWC2 contig_1 cds 2257098 2258399 - GCA000560365_02225 pdp pyrimidine-nucleoside phosphorylase COG:COG0213, COG:F, EC:2.4.2.2, GO:0004645, GO:0004850, GO:0005829, GO:0006206, GO:0006213, GO:0009032, GO:0016154, GO:0046872, GO:0047847, KEGG:K04047, RefSeq:WP_001242318.1, SO:0001217, UniParc:UPI00004B5C81, UniRef:UniRef100_Q2FWC1, UniRef:UniRef50_Q99SC3, UniRef:UniRef90_Q99SC3 contig_1 cds 2258678 2259340 - GCA000560365_02226 deoC deoxyribose-phosphate aldolase COG:COG0274, COG:F, EC:4.1.2.4, GO:0004139, GO:0005737, GO:0006018, GO:0009264, GO:0016052, KEGG:K01619, RefSeq:WP_001083316.1, SO:0001217, UniParc:UPI0000696CB3, UniRef:UniRef100_A0A5A8VF33, UniRef:UniRef50_Q6GKG7, UniRef:UniRef90_Q6GKG7 contig_1 cds 2259655 2260365 + GCA000560365_02227 deoD purine-nucleoside phosphorylase COG:COG0813, COG:F, EC:2.4.2.1, GO:0004731, GO:0006139, KEGG:K03784, RefSeq:WP_000160304.1, SO:0001217, UniParc:UPI000005460E, UniRef:UniRef100_Q2FWB8, UniRef:UniRef50_A0A1C5V1M1, UniRef:UniRef90_A0A2K4AEZ2 contig_1 cds 2260486 2260929 - GCA000560365_02228 dps DNA starvation/stationary phase protection protein COG:B, COG:COG0783, KEGG:K04047, RefSeq:WP_000070866.1, SO:0001217, UniParc:UPI000005460F, UniRef:UniRef100_Q2FWB7, UniRef:UniRef50_A0A9Q9F1A2, UniRef:UniRef90_A0A2K4AF10 contig_1 cds 2261129 2261542 - GCA000560365_02229 yuxK DUF393 domain-containing protein COG:COG3011, COG:R, RefSeq:WP_001123303.1, SO:0001217, UniParc:UPI0000054610, UniRef:UniRef100_Q2FWB6, UniRef:UniRef50_Q2FWB6, UniRef:UniRef90_Q2FWB6 contig_1 cds 2262000 2263373 - GCA000560365_02230 eVE EVE domain-containing protein COG:COG2947, COG:R, RefSeq:WP_000123393.1, SO:0001217, UniParc:UPI0000054611, UniRef:UniRef100_Q2FWB5, UniRef:UniRef50_Q49Z89, UniRef:UniRef90_Q2FWB5 contig_1 cds 2264045 2264275 - GCA000560365_02231 Integral membrane protein RefSeq:WP_000808817.1, SO:0001217, UniParc:UPI00000D76A1, UniRef:UniRef100_Q2FWB4, UniRef:UniRef50_Q2FWB4, UniRef:UniRef90_Q2FWB4 contig_1 cds 2264306 2265244 - GCA000560365_02232 manA mannose-6-phosphate isomerase, class I COG:COG1482, COG:G, EC:5.3.1.8, GO:0004476, GO:0005975, GO:0008270, RefSeq:WP_001127960.1, SO:0001217, UniParc:UPI00000D7844, UniRef:UniRef100_A0A7U7EZF3, UniRef:UniRef50_A0A0A8HNJ1, UniRef:UniRef90_A0A0E1XIN3 contig_1 cds 2265679 2266344 - GCA000560365_02233 ybjT putative sugar epimerase YhfK COG:COG0702, COG:R, RefSeq:WP_001024094.1, SO:0001217, UniParc:UPI0000054615, UniRef:UniRef100_Q2FWB1, UniRef:UniRef50_A0A1W7A9I9, UniRef:UniRef90_A0A7U7JQM2 contig_1 cds 2266496 2266816 + GCA000560365_02234 czrA Zn(II)-responsive metalloregulatory transcriptional repressor CzrA BlastRules:WP_000003759, BlastRules:WP_002499956, BlastRules:WP_003231284, COG:COG0640, COG:K, RefSeq:WP_000003759.1, SO:0001217, UniParc:UPI0000054616, UniRef:UniRef100_Q2FWB0, UniRef:UniRef50_Q2FWB0, UniRef:UniRef90_Q2FWB0 contig_1 cds 2266818 2267798 + GCA000560365_02235 czrB CDF family zinc efflux transporter CzrB BlastRules:WP_128146008, COG:COG1230, COG:P, RefSeq:WP_000019744.1, SO:0001217, UniParc:UPI00004B5C82, UniRef:UniRef100_Q2FWA9, UniRef:UniRef50_A0A7U7JQM3, UniRef:UniRef90_A0A7U7JQM3 contig_1 cds 2268064 2269155 + GCA000560365_02236 Transcriptional regulator RefSeq:WP_000495671.1, SO:0001217, UniParc:UPI0000696CB4, UniRef:UniRef100_Q2FWA8, UniRef:UniRef50_A0A0E1X8C7, UniRef:UniRef90_A0A0E1X8C7 contig_1 sorf 2269655 2269735 - GCA000560365_02237 Holin-like toxin RefSeq:WP_001790137.1, SO:0001217, UniParc:UPI00000D9F3D, UniRef:UniRef100_Q2FWA7, UniRef:UniRef50_Q2FWA7, UniRef:UniRef90_Q2FWA7 contig_1 ncRNA 2269662 2269842 - GCA000560365_02238 rli28 Listeria sRNA rli28 RFAM:RF01492, SO:0000655 contig_1 cds 2270184 2270387 - GCA000560365_02239 DNA-invertase hin SO:0001217, UniParc:UPI000069AB2E, UniRef:UniRef100_Q2FWA6, UniRef:UniRef50_A0A6J9WDM0, UniRef:UniRef90_A0A6J9WDM0 contig_1 cds 2270446 2271582 - GCA000560365_02240 SAP domain-containing protein RefSeq:WP_000115564.1, SO:0001217, UniParc:UPI00004B5C84, UniRef:UniRef100_A0A0E7RYR7, UniRef:UniRef50_Q2FWA5, UniRef:UniRef90_Q2FWA5 contig_1 cds 2272668 2273525 - GCA000560365_02241 cof Cof-type HAD-IIB family hydrolase COG:COG0561, COG:HR, RefSeq:WP_000370924.1, SO:0001217, UniParc:UPI0000696CB5, UniRef:UniRef100_Q2FWA2, UniRef:UniRef50_Q2FWA2, UniRef:UniRef90_Q2FWA2 contig_1 cds 2273593 2274375 - GCA000560365_02242 modF ABC superfamily ATP binding cassette transporter, ABC protein COG:COG1119, COG:P, RefSeq:WP_000908176.1, SO:0001217, UniParc:UPI0000696CB6, UniRef:UniRef100_A0A0E8J4E5, UniRef:UniRef50_Q4L835, UniRef:UniRef90_A0A391EDP6 contig_1 cds 2274607 2276412 - GCA000560365_02243 glmS glutamine--fructose-6-phosphate transaminase (isomerizing) COG:COG0449, COG:M, EC:2.6.1.16, GO:0004360, GO:0005829, GO:0005975, GO:0006002, GO:0006047, GO:0006487, GO:0097367, GO:1901137, KEGG:K00820, RefSeq:WP_000334465.1, SO:0001217, UniParc:UPI0000054621, UniRef:UniRef100_Q5HE49, UniRef:UniRef50_Q88YE7, UniRef:UniRef90_Q6GES3 contig_1 ncRNA-region 2276614 2276830 - glmS glucosamine-6-phosphate activated ribozyme aptamer RFAM:RF00234, SO:0005836 contig_1 cds 2277093 2278631 + GCA000560365_02244 mtlA PTS system mannitol-specific EIICB component COG:COG2213, COG:G, EC:2.7.1.197, GO:0005886, GO:0009401, GO:0016301, GO:0022872, GO:0090563, KEGG:K02800, RefSeq:WP_000083807.1, SO:0001217, UniParc:UPI0000054622, UniRef:UniRef100_Q99SA3, UniRef:UniRef50_P28008, UniRef:UniRef90_Q99SA3 contig_1 cds 2278666 2280798 + GCA000560365_02245 bglG BglG family transcription antiterminator COG:COG3711, COG:K, KEGG:K03483, RefSeq:WP_000927360.1, SO:0001217, UniParc:UPI0000696CB7, UniRef:UniRef100_A0A1S6C2H3, UniRef:UniRef50_A0A0D6H7E9, UniRef:UniRef90_A0A0D6H7E9 contig_1 cds 2280810 2281244 + GCA000560365_02246 mtlF Mannitol-specific phosphotransferase enzyme IIA component COG:COG4668, COG:G, GO:0005737, GO:0005886, GO:0009401, GO:0016301, GO:0090563, RefSeq:WP_001292149.1, SO:0001217, UniParc:UPI0000165A32, UniRef:UniRef100_Q5HE46, UniRef:UniRef50_P17876, UniRef:UniRef90_Q5HE46 contig_1 cds 2281244 2282350 + GCA000560365_02247 mtlD mannitol-1-phosphate 5-dehydrogenase COG:COG0246, COG:G, EC:1.1.1.17, GO:0005829, GO:0008926, GO:0019592, KEGG:K00009, RefSeq:WP_000648718.1, SO:0001217, UniParc:UPI00000B98FA, UniRef:UniRef100_Q2FEX4, UniRef:UniRef50_Q2FW96, UniRef:UniRef90_Q2FW96 contig_1 cds 2282669 2286550 - GCA000560365_02248 fmtB Truncated FmtB protein SO:0001217, UniParc:UPI0000696CB9, UniRef:UniRef100_A0A0H2XI22, UniRef:UniRef50_A0A0H2XI22, UniRef:UniRef90_A0A0H2XI22 contig_1 cds 2286797 2290105 - GCA000560365_02249 DUF1542 domain-containing protein SO:0001217, UniParc:UPI0000696CBA, UniRef:UniRef100_Q9RL69, UniRef:UniRef50_Q2FW95, UniRef:UniRef90_Q2FW95 contig_1 cds 2290382 2291737 - GCA000560365_02250 glmM phosphoglucosamine mutase COG:COG1109, COG:G, EC:5.4.2.10, GO:0000287, GO:0004615, GO:0005829, GO:0005975, GO:0006048, GO:0008966, GO:0009252, RefSeq:WP_000521491.1, SO:0001217, UniParc:UPI0000054627, UniRef:UniRef100_P0C0V7, UniRef:UniRef50_P0C0V7, UniRef:UniRef90_P0C0V7 contig_1 cds 2291764 2292696 - GCA000560365_02251 ybbR YbbR-like domain-containing protein COG:COG4856, COG:T, RefSeq:WP_000894032.1, SO:0001217, UniParc:UPI0000054628, UniRef:UniRef100_Q2FW93, UniRef:UniRef50_A0A2T4S925, UniRef:UniRef90_Q2FW93 contig_1 cds 2292698 2293507 - GCA000560365_02252 cdaA diadenylate cyclase CdaA COG:COG1642, COG:T, EC:2.7.7.85, GO:0004016, GO:0006171, KEGG:K18672, RefSeq:WP_000347896.1, SO:0001217, UniParc:UPI0000054629, UniRef:UniRef100_Q2FW92, UniRef:UniRef50_A0A223KXB4, UniRef:UniRef90_A0A898CM21 contig_1 cds 2293696 2294604 - GCA000560365_02253 rocF arginase COG:COG0010, COG:E, EC:3.5.3.1, GO:0000050, GO:0004053, GO:0005737, GO:0019547, GO:0030145, GO:0046872, KEGG:K01476, RefSeq:WP_000167867.1, SO:0001217, UniParc:UPI000005462A, UniRef:UniRef100_P60086, UniRef:UniRef50_P60086, UniRef:UniRef90_P60086 contig_1 ncRNA 2294764 2294821 - GCA000560365_02254 sau-5949 Staphylococcus sRNA sau-5949 RFAM:RF02396, SO:0000655 contig_1 cds 2294830 2296032 + GCA000560365_02255 tnp ISL3 family IS1181 transposase COG:COG3464, COG:X, GO:0004803, IS:IS1181, KEGG:K07485, RefSeq:WP_001550301.1, SO:0001217, UniParc:UPI000069AAF3, UniRef:UniRef100_Q2FW90, UniRef:UniRef50_A0A380DS67, UniRef:UniRef90_A0A380DS67 contig_1 tRNA 2296263 2296335 - GCA000560365_02256 trnK tRNA-Lys(ttt) SO:0000265 contig_1 tRNA 2296339 2296413 - GCA000560365_02257 trnQ tRNA-Gln(ttg) SO:0000261 contig_1 tRNA 2296423 2296506 - GCA000560365_02258 trnY tRNA-Tyr(gta) SO:0000272 contig_1 tRNA 2296536 2296611 - GCA000560365_02259 trnV tRNA-Val(tac) SO:0000273 contig_1 tRNA 2296619 2296690 - GCA000560365_02260 trnE tRNA-Glu(ttc) SO:0000259 contig_1 tRNA 2296692 2296766 - GCA000560365_02261 trnN tRNA-Asn(gtt) SO:0000257 contig_1 rRNA 2296777 2296891 - GCA000560365_02262 rrf 5S ribosomal RNA GO:0003735, GO:0005840, KEGG:K01985, RFAM:RF00001, SO:0000652 contig_1 rRNA 2296964 2299886 - GCA000560365_02263 rrl 23S ribosomal RNA GO:0003735, GO:0005840, KEGG:K01980, RFAM:RF02541, SO:0001001 contig_1 rRNA 2300191 2301742 - GCA000560365_02264 rrs 16S ribosomal RNA GO:0003735, GO:0005840, KEGG:K01977, RFAM:RF00177, SO:0001000 contig_1 cds 2302199 2303263 - GCA000560365_02265 mrp Iron-sulfur cluster carrier protein COG:COG0489, COG:D, RefSeq:WP_000958531.1, SO:0001217, UniParc:UPI00000D7766, UniRef:UniRef100_A0A380EMC4, UniRef:UniRef50_P50863, UniRef:UniRef90_A0A7U7JQN2 contig_1 cds 2303411 2304853 - GCA000560365_02266 lmrS multidrug efflux MFS transporter LmrS BlastRules:WP_001140999, COG:COG2814, COG:G, KEGG:K18934, NCBIProtein:AAW38464.1, RefSeq:WP_001140995.1, SO:0001217, UniParc:UPI0000696CBD, UniRef:UniRef100_A0A5A8VCB8, UniRef:UniRef50_Q2FW85, UniRef:UniRef90_Q2FW85 contig_1 cds 2305175 2305642 - GCA000560365_02267 sepA multidrug efflux transporter SepA BlastRules:WP_011382353, GO:0005886, SO:0001217, UniParc:UPI00006E6025, UniRef:UniRef100_A0A2Y2NE66, UniRef:UniRef50_Q5HM62, UniRef:UniRef90_Q2FW84 contig_1 cds 2305747 2307090 - GCA000560365_02268 sdrM multidrug efflux MFS transporter SdrM COG:COG2814, COG:G, GO:0005886, GO:0022857, GO:0046677, KEGG:K18935, RefSeq:WP_001237506.1, SO:0001217, UniParc:UPI0000054BD8, UniRef:UniRef100_Q99S97, UniRef:UniRef50_Q99S97, UniRef:UniRef90_Q99S97 contig_1 cds 2307267 2307953 - GCA000560365_02269 yqfA Hemolysin III COG:COG1272, COG:U, SO:0001217, UniParc:UPI00000D0F2C, UniRef:UniRef100_Q2FW82, UniRef:UniRef50_Q2FW82, UniRef:UniRef90_Q2FW82 contig_1 cds 2307969 2309156 - GCA000560365_02270 qRI1 putative uridylyltransferase MW2097 COG:COG4284, COG:G, EC:2.7.7.-, GO:0070569, KEGG:K11442, RefSeq:WP_000884739.1, SO:0001217, UniParc:UPI00004B5C89, UniRef:UniRef100_Q2FW81, UniRef:UniRef50_Q2FW81, UniRef:UniRef90_Q2FW81 contig_1 cds 2309200 2309715 - GCA000560365_02271 ybcI Metal-dependent hydrolase COG:COG1988, COG:R, KEGG:K07038, RefSeq:WP_000147094.1, SO:0001217, UniParc:UPI0000054BDC, UniRef:UniRef100_Q2FW80, UniRef:UniRef50_Q2FW80, UniRef:UniRef90_Q2FW80 contig_1 cds 2309892 2310152 + GCA000560365_02272 UPF0457 protein SAR2264 RefSeq:WP_001251935.1, SO:0001217, UniParc:UPI0000054BDD, UniRef:UniRef100_Q2FW79, UniRef:UniRef50_Q2FW79, UniRef:UniRef90_Q2FW79 contig_1 cds 2310284 2311654 - GCA000560365_02273 spoVV Nucleoside transporter/FeoB GTPase Gate domain-containing protein COG:COG3314, COG:DE, RefSeq:WP_001549577.1, SO:0001217, UniParc:UPI0000054BDE, UniRef:UniRef100_Q2FW78, UniRef:UniRef50_B9DM72, UniRef:UniRef90_A0A7U7PWQ6 contig_1 cds 2311890 2312858 - GCA000560365_02274 fepD Heme ABC type transporter HtsABC, permease protein HtsC COG:COG0609, COG:P, RefSeq:WP_000989091.1, SO:0001217, UniParc:UPI0000054BDF, UniRef:UniRef100_Q2FW77, UniRef:UniRef50_A0A2K4AJP4, UniRef:UniRef90_A0A2K4AJP4 contig_1 cds 2312855 2313886 - GCA000560365_02275 fepD Iron-dicitrate ABC transporter (Permease) COG:COG0609, COG:P, RefSeq:WP_000974906.1, SO:0001217, UniParc:UPI0000054BE0, UniRef:UniRef100_Q2FW76, UniRef:UniRef50_A0A380G4K5, UniRef:UniRef90_A0A0U1MRT1 contig_1 cds 2313898 2314881 - GCA000560365_02276 fecB Iron-dicitrate ABC transporter (Binding lipoprotein) COG:COG4594, COG:P, KEGG:K23181, RefSeq:WP_001214661.1, SO:0001217, UniParc:UPI00000CAB53, UniRef:UniRef100_Q2FW75, UniRef:UniRef50_S2Y8V6, UniRef:UniRef90_A0A0U1MR80 contig_1 cds 2315273 2316343 - GCA000560365_02277 sfaC staphyloferrin A biosynthesis protein SfaC BlastRules:WP_000951636, COG:COG3457, COG:E, EC:5.1.1.12, KEGG:K21898, RefSeq:WP_000951636.1, SO:0001217, UniParc:UPI0000054BE2, UniRef:UniRef100_Q2FW73, UniRef:UniRef50_Q2FW73, UniRef:UniRef90_Q2FW73 contig_1 cds 2316350 2318107 - GCA000560365_02278 sfaB staphyloferrin A synthetase SfaB BlastRules:WP_000262640, COG:COG4264, COG:P, EC:6.3.2.57, GO:0005524, GO:0016874, GO:0019290, KEGG:K23447, RefSeq:WP_000262640.1, SO:0001217, UniParc:UPI0000054BE3, UniRef:UniRef100_Q2FW72, UniRef:UniRef50_Q2FW72, UniRef:UniRef90_Q2FW72 contig_1 cds 2318094 2319287 - GCA000560365_02279 sfaA staphyloferrin A export MFS transporter BlastRules:WP_000170403, GO:0005886, GO:0022857, KEGG:K23448, RefSeq:WP_000170403.1, SO:0001217, UniParc:UPI0000054BE4, UniRef:UniRef100_Q2FW71, UniRef:UniRef50_Q2FW71, UniRef:UniRef90_Q2FW71 contig_1 cds 2319389 2321365 + GCA000560365_02280 sfaD D-ornithine--citrate ligase SfaD BlastRules:WP_001052566, COG:COG4264, COG:P, EC:6.3.2.58, GO:0005524, GO:0016874, GO:0019290, KEGG:K23446, RefSeq:WP_001052566.1, SO:0001217, UniParc:UPI00004B5C8B, UniRef:UniRef100_A0A0E7QLN2, UniRef:UniRef50_Q2FW70, UniRef:UniRef90_Q2FW70 contig_1 ncRNA 2321547 2321784 - GCA000560365_02281 tsr24 S. aureus tsr24 small RNA RFAM:RF02577, SO:0000655 contig_1 cds 2321821 2322621 + GCA000560365_02282 insH Transposase InsH N-terminal domain-containing protein SO:0001217, UniParc:UPI000069AB39, UniRef:UniRef100_Q2FW69, UniRef:UniRef50_A0A5S9I4R9, UniRef:UniRef90_Q2FW69 contig_1 cds 2322639 2322938 + GCA000560365_02283 tnp IS1182 family transposase GO:0004803, KEGG:K07487, SO:0001217, UniParc:UPI000069AB3A, UniRef:UniRef100_Q2FW68, UniRef:UniRef50_A0A9P2Z0V2, UniRef:UniRef90_Q2FW68 contig_1 cds 2323101 2323445 + GCA000560365_02284 IS1182 family transposase GO:0004803, KEGG:K07487, SO:0001217, UniParc:UPI000069AB3B, UniRef:UniRef100_Q2FW67, UniRef:UniRef50_A0A9P2Z0V2, UniRef:UniRef90_A0AAN1ZQC3 contig_1 cds 2323481 2323990 - GCA000560365_02285 asp23 Alkaline shock protein 23 COG:COG1302, COG:S, RefSeq:WP_000215236.1, SO:0001217, UniParc:UPI0000054BEA, UniRef:UniRef100_Q2FW66, UniRef:UniRef50_Q2FW66, UniRef:UniRef90_Q2FW66 contig_1 cds 2324053 2324292 - GCA000560365_02286 DUF2273 domain-containing protein COG:COG5547, COG:S, RefSeq:WP_000002683.1, SO:0001217, UniParc:UPI0000054BEB, UniRef:UniRef100_Q2FW65, UniRef:UniRef50_Q2FW65, UniRef:UniRef90_Q2FW65 contig_1 cds 2324305 2324841 - GCA000560365_02287 amaP alkaline shock response membrane anchor protein AmaP RefSeq:WP_000825819.1, SO:0001217, UniParc:UPI00000D7671, UniRef:UniRef100_Q2FW64, UniRef:UniRef50_Q2FW64, UniRef:UniRef90_Q2FW64 contig_1 cds 2325016 2326578 - GCA000560365_02288 betT BCCT family transporter COG:COG1292, COG:M, RefSeq:WP_000792345.1, SO:0001217, UniParc:UPI0000054BED, UniRef:UniRef100_Q2FW63, UniRef:UniRef50_A0A9X4QYP5, UniRef:UniRef90_Q7BJZ6 contig_1 cds 2326885 2327886 - GCA000560365_02289 qor Zinc-type alcohol dehydrogenase-like protein MW2112 COG:COG0604, COG:CR, GO:0008270, GO:0016491, RefSeq:WP_000781945.1, SO:0001217, UniParc:UPI0000054BEE, UniRef:UniRef100_Q5HE19, UniRef:UniRef50_Q5HM44, UniRef:UniRef90_P63475 contig_1 cds 2328120 2329124 - GCA000560365_02290 curA Quinone oxidoreductase COG:COG2130, COG:QR, SO:0001217, UniParc:UPI0000054BF0, UniRef:UniRef100_Q2G2D7, UniRef:UniRef50_A0A1H5ZK44, UniRef:UniRef90_A0A7I8NIX0 contig_1 cds 2329404 2330273 - GCA000560365_02291 Alpha/beta hydrolase COG:COG4814, COG:S, RefSeq:WP_000719324.1, SO:0001217, UniParc:UPI0000696CBF, UniRef:UniRef100_A0A2C9TQK5, UniRef:UniRef50_Q2G2D6, UniRef:UniRef90_Q2G2D6 contig_1 cds 2330539 2331951 - GCA000560365_02292 lacG 6-phospho-beta-galactosidase COG:COG2723, COG:G, EC:3.2.1.85, GO:0005829, GO:0008422, GO:0019512, GO:0033920, RefSeq:WP_000169220.1, SO:0001217, UniParc:UPI0000054BF2, UniRef:UniRef100_Q2G2D5, UniRef:UniRef50_C7N8L9, UniRef:UniRef90_Q2G2D5 contig_1 cds 2331969 2333681 - GCA000560365_02293 lacE lactose-specific PTS transporter subunit EIIC COG:COG1455, COG:G, EC:2.7.1.207, GO:0005886, GO:0009401, GO:0015155, GO:0016020, GO:0016301, GO:0019197, GO:0022869, GO:1901264, KEGG:K02788, RefSeq:WP_000983330.1, SO:0001217, UniParc:UPI00000D772D, UniRef:UniRef100_Q5HE15, UniRef:UniRef50_P11162, UniRef:UniRef90_P11162 contig_1 cds 2333687 2333998 - GCA000560365_02294 lacF PTS system lactose-specific EIIA component COG:COG1447, COG:G, EC:2.7.1.207, GO:0005737, GO:0009401, GO:0016740, GO:0046872, KEGG:K02786, RefSeq:WP_001078309.1, SO:0001217, UniParc:UPI0000054BF4, UniRef:UniRef100_Q5HE14, UniRef:UniRef50_P23532, UniRef:UniRef90_Q5HE14 contig_1 cds 2334020 2335000 - GCA000560365_02295 lacD tagatose-bisphosphate aldolase COG:COG3684, COG:GP, EC:4.1.2.40, GO:0009024, GO:0009025, GO:0019512, GO:0061595, GO:1902777, GO:2001059, KEGG:K01635, RefSeq:WP_000047009.1, SO:0001217, UniParc:UPI0000054BF5, UniRef:UniRef100_P0A011, UniRef:UniRef50_P26593, UniRef:UniRef90_P0A011 contig_1 cds 2335004 2335936 - GCA000560365_02296 lacC tagatose-6-phosphate kinase COG:COG1105, COG:G, EC:2.7.1.144, GO:0005524, GO:0005829, GO:0008443, GO:0009024, GO:0019512, GO:2001059, KEGG:K00917, RefSeq:WP_000604135.1, SO:0001217, UniParc:UPI0000054BF6, UniRef:UniRef100_P0A0B9, UniRef:UniRef50_P0A0B9, UniRef:UniRef90_P0A0B9 contig_1 cds 2335949 2336464 - GCA000560365_02297 lacB galactose-6-phosphate isomerase subunit LacB COG:COG0698, COG:G, EC:5.3.1.26, GO:0004751, GO:0009052, GO:0016861, GO:0019316, GO:0019388, GO:0019512, GO:0050044, RefSeq:WP_000684746.1, SO:0001217, UniParc:UPI0000054BF7, UniRef:UniRef100_Q2G2R0, UniRef:UniRef50_P23495, UniRef:UniRef90_Q2G2R0 contig_1 cds 2336480 2336908 - GCA000560365_02298 lacA galactose-6-phosphate isomerase subunit LacA COG:COG0698, COG:G, EC:5.3.1.26, GO:0004751, GO:0009052, GO:0019316, GO:0019388, GO:0019512, GO:0050044, KEGG:K01819, RefSeq:WP_000974608.1, SO:0001217, UniParc:UPI0000054BF8, UniRef:UniRef100_Q2G2R4, UniRef:UniRef50_Q2G2R4, UniRef:UniRef90_Q2G2R4 contig_1 cds 2337276 2338031 - GCA000560365_02299 lacR Lactose phosphotransferase system repressor GO:0003677, GO:0003700, GO:0005988, KEGG:K02530, RefSeq:WP_001032739.1, SO:0001217, UniParc:UPI000012E1E8, UniRef:UniRef100_P0A0Q0, UniRef:UniRef50_P0A0Q0, UniRef:UniRef90_P0A0Q0 contig_1 cds 2338273 2339013 + GCA000560365_02300 cobB NAD-dependent protein deacylase COG:COG0846, COG:O, EC:2.3.1.286, GO:0005737, GO:0008270, GO:0032041, GO:0034979, GO:0046969, GO:0046970, GO:0051287, GO:0070403, GO:0097372, GO:0140765, GO:0141222, RefSeq:WP_001549592.1, SO:0001217, UniParc:UPI000069AB3C, UniRef:UniRef100_A0A2P0A8H1, UniRef:UniRef50_P66815, UniRef:UniRef90_P66815 contig_1 cds 2339304 2339738 - GCA000560365_02301 hypothetical protein PFAM:PF13021.12, SO:0001217, UniParc:UPI0000696CC0, UniRef:UniRef100_A0A0H2XEJ0, UniRef:UniRef50_A0A0H2XEJ0, UniRef:UniRef90_A0A0H2XEJ0 contig_1 cds 2340173 2340298 - GCA000560365_02302 Doubtful CDS No database matches RefSeq:WP_001549596.1, SO:0001217, UniParc:UPI0000054BFD, UniRef:UniRef100_Q2FW58, UniRef:UniRef50_Q2FW58, UniRef:UniRef90_Q2FW58 contig_1 cds 2340518 2341366 - GCA000560365_02303 aRA1 Aldo/keto reductase COG:COG0656, COG:Q, RefSeq:WP_001015500.1, SO:0001217, UniParc:UPI0000054BFE, UniRef:UniRef100_Q2FW57, UniRef:UniRef50_A0A0U1MRZ3, UniRef:UniRef90_A0A0U1MRZ3 contig_1 cds 2341436 2341852 - GCA000560365_02304 soxR MerR family transcriptional regulator COG:COG0789, COG:K, RefSeq:WP_000850012.1, SO:0001217, UniParc:UPI0000696CC1, UniRef:UniRef100_A0A1S5YP49, UniRef:UniRef50_R2R848, UniRef:UniRef90_A0A390R2I5 contig_1 ncRNA 2342090 2342240 + GCA000560365_02305 tsr32 S. aureus tsr32 small RNA RFAM:RF02581, SO:0000655 contig_1 cds 2342260 2344683 + GCA000560365_02306 hysA hyaluronate lyase HysA BlastRules:WP_000222239, EC:4.2.2.1, GO:0005576, GO:0005975, GO:0030246, GO:0030340, KEGG:K01727, RefSeq:WP_000222239.1, SO:0001217, UniParc:UPI000012D050, UniRef:UniRef100_Q59801, UniRef:UniRef50_Q59801, UniRef:UniRef90_Q59801 contig_1 cds 2344743 2345597 - GCA000560365_02307 nlpD lysostaphin COG:COG0739, COG:M, RefSeq:WP_001044432.1, SO:0001217, UniParc:UPI0000054C01, UniRef:UniRef100_Q2FW53, UniRef:UniRef50_Q2FW53, UniRef:UniRef90_Q2FW53 contig_1 cds 2345808 2346623 - GCA000560365_02308 cof putative hydrolase in edin-B 3'region COG:COG0561, COG:HR, EC:3.-.-.-, GO:0000287, GO:0005829, GO:0016791, RefSeq:WP_000044363.1, SO:0001217, UniParc:UPI00004B5C92, UniRef:UniRef100_Q2FW52, UniRef:UniRef50_Q8GAX4, UniRef:UniRef90_Q8GAX4 contig_1 cds 2346917 2347342 + GCA000560365_02309 MAP domain-containing protein RefSeq:WP_001549607.1, SO:0001217, UniParc:UPI00000522A8, UniRef:UniRef100_Q2FW51, UniRef:UniRef50_A0A7U7JQY5, UniRef:UniRef90_A0A7U7JQY5 contig_1 cds 2347706 2348410 - GCA000560365_02310 budA acetolactate decarboxylase COG:COG3527, COG:Q, EC:4.1.1.5, GO:0045151, GO:0047605, RefSeq:WP_000186134.1, SO:0001217, UniParc:UPI00000CA9E8, UniRef:UniRef100_Q2FW50, UniRef:UniRef50_A0A641A785, UniRef:UniRef90_A0A0U1MRE6 contig_1 cds 2348447 2350111 - GCA000560365_02311 alsS acetolactate synthase AlsS COG:COG0028, COG:EH, EC:2.2.1.6, GO:0000287, GO:0003984, GO:0030976, GO:0034077, RefSeq:WP_000130149.1, SO:0001217, UniParc:UPI00000CAB60, UniRef:UniRef100_A0A0D6WCP3, UniRef:UniRef50_A0A0U1MRE5, UniRef:UniRef90_A0A0D6WCP3 contig_1 cds 2351301 2352707 - GCA000560365_02312 hypothetical protein RefSeq:WP_001549616.1, SO:0001217, UniParc:UPI0000054C08, UniRef:UniRef100_Q2FW46, UniRef:UniRef50_Q2FW46, UniRef:UniRef90_Q2FW46 contig_1 cds 2352836 2353972 - GCA000560365_02313 AAA+ ATPase domain-containing protein RefSeq:WP_000402465.1, SO:0001217, UniParc:UPI0000054C09, UniRef:UniRef100_Q2FW45, UniRef:UniRef50_A0A0R1K3U4, UniRef:UniRef90_Q2FW45 contig_1 cds 2353973 2354764 - GCA000560365_02314 Phage tail protein SO:0001217, UniParc:UPI0000696CC2, UniRef:UniRef100_A0A0D6H5I9, UniRef:UniRef50_A0A7L8W7L6, UniRef:UniRef90_Q2FW43 contig_1 cds 2354777 2355070 - GCA000560365_02315 Type ISP restriction-modification enzyme LLaBIII C-terminal specificity domain-containing protein RefSeq:WP_001549623.1, SO:0001217, UniParc:UPI0000054C0B, UniRef:UniRef100_Q2FW42, UniRef:UniRef50_Q2FW42, UniRef:UniRef90_Q2FW42 contig_1 cds 2355067 2356164 - GCA000560365_02316 Type ISP restriction-modification enzyme LLaBIII C-terminal specificity domain-containing protein RefSeq:WP_001549626.1, SO:0001217, UniParc:UPI000069AB43, UniRef:UniRef100_Q2FW41, UniRef:UniRef50_Q2FW41, UniRef:UniRef90_Q2FW41 contig_1 cds 2356709 2357107 - GCA000560365_02317 rpsI 30S ribosomal protein S9 COG:COG0103, COG:J, GO:0003723, GO:0003735, GO:0005840, GO:0006412, GO:0022627, KEGG:K02996, RefSeq:WP_000170975.1, SO:0001217, UniParc:UPI0000048023, UniRef:UniRef100_Q2FW39, UniRef:UniRef50_Q2FW39, UniRef:UniRef90_Q2FW39 contig_1 cds 2357121 2357558 - GCA000560365_02318 rplM 50S ribosomal protein L13 COG:COG0102, COG:J, GO:0003729, GO:0003735, GO:0005840, GO:0006412, GO:0017148, GO:0022625, KEGG:K02871, RefSeq:WP_001250038.1, SO:0001217, UniParc:UPI0000054B7F, UniRef:UniRef100_Q2FW38, UniRef:UniRef50_Q2FW38, UniRef:UniRef90_Q2FW38 contig_1 ncRNA-region 2357686 2357755 - Ribosomal protein L13 leader RFAM:RF00555, SO:0000140 contig_1 cds 2357798 2358601 - GCA000560365_02319 truA tRNA pseudouridine(38-40) synthase TruA COG:COG0101, COG:J, EC:5.4.99.12, GO:0001522, GO:0003723, GO:0009451, GO:0009982, GO:0031119, GO:0160147, KEGG:K06173, RefSeq:WP_001221860.1, SO:0001217, UniParc:UPI0000054B89, UniRef:UniRef100_Q2FW37, UniRef:UniRef50_Q2FW37, UniRef:UniRef90_Q2FW37 contig_1 cds 2358606 2359412 - GCA000560365_02320 ecfT Energy-coupling factor transporter transmembrane protein EcfT COG:COG0619, COG:H, GO:0005886, GO:0022857, KEGG:K16785, RefSeq:WP_000791620.1, SO:0001217, UniParc:UPI0000054B94, UniRef:UniRef100_D3ERJ1, UniRef:UniRef50_D3ERJ1, UniRef:UniRef90_D3ERJ1 contig_1 cds 2359402 2360262 - GCA000560365_02321 ecfA2 energy-coupling factor transporter ATPase COG:COG1122, COG:PR, EC:3.6.3.-, GO:0005524, GO:0016887, GO:0042626, GO:0043190, RefSeq:WP_000155386.1, SO:0001217, UniParc:UPI0000054B9F, UniRef:UniRef100_Q2FW35, UniRef:UniRef50_Q2FW35, UniRef:UniRef90_Q2FW35 contig_1 cds 2360259 2361068 - GCA000560365_02322 ecfA1 energy-coupling factor transporter ATPase COG:COG1122, COG:PR, EC:7.-.-.-, GO:0005524, GO:0006810, GO:0009898, GO:0016887, GO:0042626, GO:0043190, RefSeq:WP_000389662.1, SO:0001217, UniParc:UPI00004B5C97, UniRef:UniRef100_Q2FW34, UniRef:UniRef50_Q2YYM4, UniRef:UniRef90_Q2YYM4 contig_1 ncRNA 2360375 2360440 + GCA000560365_02323 sau-31 Staphylococcus sRNA sau-31 RFAM:RF02389, SO:0000655 contig_1 ncRNA 2361417 2361480 - GCA000560365_02324 sau-30 Staphylococcus sRNA sau-30 RFAM:RF02388, SO:0000655 contig_1 cds 2361606 2361974 - GCA000560365_02325 rplQ 50S ribosomal protein L17 COG:COG0203, COG:J, GO:0003735, GO:0005840, GO:0006412, GO:0022625, RefSeq:WP_000542274.1, SO:0001217, UniParc:UPI0000054BB3, UniRef:UniRef100_Q2FW33, UniRef:UniRef50_P20277, UniRef:UniRef90_Q2FW33 contig_1 cds 2361991 2362935 - GCA000560365_02326 rpoA DNA-directed RNA polymerase subunit alpha COG:COG0202, COG:K, EC:2.7.7.6, GO:0000428, GO:0001054, GO:0001055, GO:0001056, GO:0001057, GO:0001058, GO:0001066, GO:0003677, GO:0003899, GO:0005737, GO:0006351, GO:0046983, RefSeq:WP_000569649.1, SO:0001217, UniParc:UPI0000054BBD, UniRef:UniRef100_Q2FW32, UniRef:UniRef50_Q2FW32, UniRef:UniRef90_Q2FW32 contig_1 cds 2363010 2363399 - GCA000560365_02327 rpsK 30S ribosomal protein S11 COG:COG0100, COG:J, GO:0003735, GO:0005840, GO:0006412, GO:0019843, GO:1990904, KEGG:K02948, RefSeq:WP_000101625.1, SO:0001217, UniParc:UPI0000048025, UniRef:UniRef100_Q2FW31, UniRef:UniRef50_Q6N4V6, UniRef:UniRef90_B9E9L6 contig_1 cds 2363423 2363788 - GCA000560365_02328 rpsM 30S ribosomal protein S13 COG:COG0099, COG:J, GO:0000049, GO:0003723, GO:0003735, GO:0005829, GO:0005840, GO:0006412, GO:0015935, GO:0019843, KEGG:K02952, RefSeq:WP_000090796.1, SO:0001217, UniParc:UPI0000048027, UniRef:UniRef100_Q2FW30, UniRef:UniRef50_P20282, UniRef:UniRef90_Q2FW30 contig_1 cds 2363811 2363924 - GCA000560365_02329 rpmJ 50S ribosomal protein L36 COG:COG0257, COG:J, GO:0003735, GO:0005737, GO:0005840, GO:0006412, GO:1990904, KEGG:K02919, RefSeq:WP_000868342.1, SO:0001217, UniParc:UPI0000054BDA, UniRef:UniRef100_Q2FW29, UniRef:UniRef50_P07841, UniRef:UniRef90_P07841 contig_1 cds 2363956 2364174 - GCA000560365_02330 infA translation initiation factor IF-1 COG:COG0361, COG:J, GO:0003743, GO:0005829, GO:0006413, GO:0019843, GO:0043022, KEGG:K02518, RefSeq:WP_001118443.1, SO:0001217, UniParc:UPI0000054BE5, UniRef:UniRef100_Q2FW28, UniRef:UniRef50_P0A3K4, UniRef:UniRef90_Q2FW28 contig_1 cds 2364367 2365014 - GCA000560365_02331 adk adenylate kinase COG:COG0563, COG:F, EC:2.7.4.3, GO:0004017, GO:0005524, GO:0005737, GO:0006139, GO:0008270, GO:0016776, GO:0019205, GO:0044209, RefSeq:WP_001021468.1, SO:0001217, UniParc:UPI000012DBE8, UniRef:UniRef100_Q5HDX9, UniRef:UniRef50_B2A4G2, UniRef:UniRef90_Q5HM20 contig_1 cds 2365031 2366323 - GCA000560365_02332 secY preprotein translocase subunit SecY COG:COG0201, COG:U, GO:0005886, GO:0006605, GO:0015031, GO:0016020, GO:0043952, GO:0065002, RefSeq:WP_000616784.1, SO:0001217, UniParc:UPI0000054BFA, UniRef:UniRef100_O08387, UniRef:UniRef50_O08387, UniRef:UniRef90_O08387 contig_1 cds 2366323 2366763 - GCA000560365_02333 rplO 50S ribosomal protein L15 COG:COG0200, COG:J, GO:0003735, GO:0006412, GO:0015934, GO:0019843, GO:0022625, KEGG:K02876, RefSeq:WP_000766074.1, SO:0001217, UniParc:UPI0000054C04, UniRef:UniRef100_P0A0F8, UniRef:UniRef50_Q5M2D2, UniRef:UniRef90_P0A0F8 contig_1 cds 2366780 2366959 - GCA000560365_02334 rpmD 50S ribosomal protein L30 COG:COG1841, COG:J, GO:0003735, GO:0006412, GO:0015934, GO:0022625, RefSeq:WP_001096577.1, SO:0001217, UniParc:UPI0000054C0F, UniRef:UniRef100_P0A0G2, UniRef:UniRef50_P0A0G2, UniRef:UniRef90_P0A0G2 contig_1 cds 2366976 2367476 - GCA000560365_02335 rpsE 30S ribosomal protein S5 COG:COG0098, COG:J, GO:0003735, GO:0005737, GO:0006412, GO:0015935, GO:0019843, KEGG:K02988, RefSeq:WP_000113851.1, SO:0001217, UniParc:UPI0000048021, UniRef:UniRef100_Q2FW23, UniRef:UniRef50_P21467, UniRef:UniRef90_B9DM30 contig_1 cds 2367497 2367856 - GCA000560365_02336 rplR 50S ribosomal protein L18 COG:COG0256, COG:J, GO:0003735, GO:0005840, GO:0006412, GO:0008097, GO:0022625, RefSeq:WP_000623881.1, SO:0001217, UniParc:UPI0000054C23, UniRef:UniRef100_Q2FW22, UniRef:UniRef50_Q2FW22, UniRef:UniRef90_Q2FW22 contig_1 cds 2367887 2368423 - GCA000560365_02337 rplF 50S ribosomal protein L6 COG:COG0097, COG:J, GO:0002181, GO:0003735, GO:0005840, GO:0006412, GO:0019843, GO:0022625, RefSeq:WP_000091975.1, SO:0001217, UniParc:UPI0000054C2C, UniRef:UniRef100_Q2FW21, UniRef:UniRef50_B1XJJ3, UniRef:UniRef90_Q2FW21 contig_1 cds 2368448 2368846 - GCA000560365_02338 rpsH 30S ribosomal protein S8 COG:COG0096, COG:J, GO:0003735, GO:0005737, GO:0005840, GO:0006412, GO:0019843, GO:1990904, RefSeq:WP_000178881.1, SO:0001217, UniParc:UPI000004801B, UniRef:UniRef100_Q2FW20, UniRef:UniRef50_P12879, UniRef:UniRef90_B9DM33 contig_1 cds 2368878 2369063 - GCA000560365_02339 rpsZ type Z 30S ribosomal protein S14 COG:COG0199, COG:J, GO:0003735, GO:0005840, GO:0006412, GO:0008270, GO:0015935, GO:0019843, KEGG:K02954, RefSeq:WP_001140799.1, SO:0001217, UniParc:UPI0000048028, UniRef:UniRef100_Q2FW19, UniRef:UniRef50_P12878, UniRef:UniRef90_Q2FW19 contig_1 cds 2369086 2369625 - GCA000560365_02340 rplE 50S ribosomal protein L5 COG:COG0094, COG:J, GO:0000049, GO:0003735, GO:0005840, GO:0006412, GO:0019843, GO:1990904, KEGG:K02931, RefSeq:WP_001080824.1, SO:0001217, UniParc:UPI00000D76D0, UniRef:UniRef100_Q2FW18, UniRef:UniRef50_Q6N4U5, UniRef:UniRef90_Q2FW18 contig_1 cds 2369652 2369969 - GCA000560365_02341 rplX 50S ribosomal protein L24 COG:COG0198, COG:J, GO:0003735, GO:0005840, GO:0006412, GO:0019843, GO:1990904, RefSeq:WP_000547687.1, SO:0001217, UniParc:UPI0000054C5E, UniRef:UniRef100_Q2FW17, UniRef:UniRef50_P0CI78, UniRef:UniRef90_Q49ZF7 contig_1 cds 2370005 2370373 - GCA000560365_02342 rplN 50S ribosomal protein L14 COG:COG0093, COG:J, GO:0003735, GO:0006412, GO:0015934, GO:0022625, GO:0070180, RefSeq:WP_000615921.1, SO:0001217, UniParc:UPI0000054C69, UniRef:UniRef100_Q2FW16, UniRef:UniRef50_B2LMN0, UniRef:UniRef90_Q927L7 contig_1 cds 2370405 2370668 - GCA000560365_02343 rpsQ 30S ribosomal protein S17 COG:COG0186, COG:J, GO:0003735, GO:0005840, GO:0006412, GO:0019843, GO:0022627, RefSeq:WP_000004086.1, SO:0001217, UniParc:UPI000004801D, UniRef:UniRef100_Q2FW15, UniRef:UniRef50_P12874, UniRef:UniRef90_Q2FW15 contig_1 cds 2370692 2370901 - GCA000560365_02344 rpmC 50S ribosomal protein L29 COG:COG0255, COG:J, GO:0003735, GO:0005840, GO:0006412, GO:0022625, RefSeq:WP_000644737.1, SO:0001217, UniParc:UPI0000133E90, UniRef:UniRef100_Q2FW14, UniRef:UniRef50_Q2FW14, UniRef:UniRef90_Q2FW14 contig_1 cds 2370891 2371325 - GCA000560365_02345 rplP 50S ribosomal protein L16 COG:COG0197, COG:J, GO:0000049, GO:0003735, GO:0006412, GO:0019843, GO:0022625, RefSeq:WP_000926310.1, SO:0001217, UniParc:UPI00000D76A9, UniRef:UniRef100_Q2FW13, UniRef:UniRef50_Q2FW13, UniRef:UniRef90_Q2FW13 contig_1 cds 2371328 2371981 - GCA000560365_02346 rpsC 30S ribosomal protein S3 COG:COG0092, COG:J, GO:0003729, GO:0003735, GO:0006412, GO:0019843, GO:0022627, KEGG:K02982, RefSeq:WP_000529877.1, SO:0001217, UniParc:UPI0000134FAF, UniRef:UniRef100_Q2FW12, UniRef:UniRef50_P23309, UniRef:UniRef90_Q2FW12 contig_1 cds 2372005 2372358 - GCA000560365_02347 rplV 50S ribosomal protein L22 COG:COG0091, COG:J, GO:0003735, GO:0006412, GO:0015934, GO:0019843, GO:0022625, KEGG:K02890, RefSeq:WP_000387527.1, SO:0001217, UniParc:UPI0000054ADA, UniRef:UniRef100_Q2FW11, UniRef:UniRef50_Q2FW11, UniRef:UniRef90_Q2FW11 contig_1 cds 2372387 2372665 - GCA000560365_02348 rpsS 30S ribosomal protein S19 COG:COG0185, COG:J, GO:0000028, GO:0003735, GO:0005737, GO:0006412, GO:0015935, GO:0019843, RefSeq:WP_000124353.1, SO:0001217, UniParc:UPI000004802B, UniRef:UniRef100_Q2FW10, UniRef:UniRef50_Q49ZG4, UniRef:UniRef90_Q49ZG4 contig_1 cds 2372732 2373565 - GCA000560365_02349 rplB 50S ribosomal protein L2 COG:COG0090, COG:J, GO:0002181, GO:0003723, GO:0003735, GO:0006412, GO:0015934, GO:0016740, GO:0019843, KEGG:K02886, RefSeq:WP_000985472.1, SO:0001217, UniParc:UPI00000522A9, UniRef:UniRef100_P60430, UniRef:UniRef50_A1BJ31, UniRef:UniRef90_P60430 contig_1 cds 2373598 2373873 - GCA000560365_02350 rplW 50S ribosomal protein L23 COG:COG0089, COG:J, GO:0003735, GO:0005840, GO:0006412, GO:0019843, GO:1990904, RefSeq:WP_000388082.1, SO:0001217, UniParc:UPI00000549A8, UniRef:UniRef100_Q2FW08, UniRef:UniRef50_A0QSD3, UniRef:UniRef90_B9DM17 contig_1 cds 2373873 2374496 - GCA000560365_02351 rplD 50S ribosomal protein L4 COG:COG0088, COG:J, GO:0003735, GO:0005840, GO:0006412, GO:0019843, GO:0022625, GO:1990904, RefSeq:WP_000024827.1, SO:0001217, UniParc:UPI00000545D9, UniRef:UniRef100_Q2FW07, UniRef:UniRef50_P42921, UniRef:UniRef90_Q49ZG7 contig_1 cds 2374523 2375185 - GCA000560365_02352 rplC 50S ribosomal protein L3 RplC COG:COG0087, COG:J, GO:0003735, GO:0005840, GO:0006412, GO:0019843, GO:0022625, KEGG:K02906, RefSeq:WP_000160212.1, SO:0001217, UniParc:UPI00000D76AA, UniRef:UniRef100_Q2FW06, UniRef:UniRef50_Q2FW06, UniRef:UniRef90_Q2FW06 contig_1 cds 2375213 2375521 - GCA000560365_02353 rpsJ_Y58D 30S ribosomal protein S10 COG:COG0051, COG:J, GO:0000049, GO:0003723, GO:0003735, GO:0005840, GO:0006412, GO:1990904, RefSeq:WP_001118667.1, SO:0001217, UniParc:UPI0000048024, UniRef:UniRef100_Q5HLZ8, UniRef:UniRef50_P0A7R5, UniRef:UniRef90_B9E9J0 contig_1 cds 2375878 2376267 + GCA000560365_02354 Integral membrane protein RefSeq:WP_000788443.1, SO:0001217, UniParc:UPI00000CAA87, UniRef:UniRef100_Q2FW05, UniRef:UniRef50_Q2FW05, UniRef:UniRef90_Q2FW05 contig_1 cds 2376459 2377793 - GCA000560365_02355 nCS2 NCS2 family permease COG:COG2252, COG:F, KEGG:K06901, RefSeq:WP_000800700.1, SO:0001217, UniParc:UPI00000D7655, UniRef:UniRef100_Q2FW04, UniRef:UniRef50_O34987, UniRef:UniRef90_Q2FW04 contig_1 cds 2377906 2380041 - GCA000560365_02356 topB DNA topoisomerase 3 COG:COG0551, COG:L, EC:5.6.2.1, GO:0000287, GO:0003677, GO:0003917, GO:0006265, GO:0006281, GO:0006310, GO:0043597, RefSeq:WP_000838479.1, SO:0001217, UniParc:UPI00000D77D4, UniRef:UniRef100_Q2FEN5, UniRef:UniRef50_P0C2W6, UniRef:UniRef90_P0C2W6 contig_1 cds 2380228 2381115 + GCA000560365_02357 N-acetyltransferase domain-containing protein RefSeq:WP_000029536.1, SO:0001217, UniParc:UPI00000D9F5F, UniRef:UniRef100_Q2FW01, UniRef:UniRef50_Q2FW01, UniRef:UniRef90_Q2FW01 contig_1 cds 2381296 2382159 + GCA000560365_02358 glcU putative glucose uptake protein GlcU COG:COG4975, COG:G, GO:0005886, GO:0015144, KEGG:K05340, RefSeq:WP_001159898.1, SO:0001217, UniParc:UPI00000D76E6, UniRef:UniRef100_Q5HDV2, UniRef:UniRef50_O07881, UniRef:UniRef90_Q6GEH7 contig_1 cds 2382578 2383486 - GCA000560365_02359 yfdV AEC family transporter COG:COG0679, COG:R, RefSeq:WP_000139189.1, SO:0001217, UniParc:UPI000169854A, UniRef:UniRef100_A0A0E8HSA0, UniRef:UniRef50_Q2FVZ8, UniRef:UniRef90_Q2FVZ8 contig_1 cds 2383619 2383783 + GCA000560365_02360 SE1832 family protein RefSeq:WP_000051206.1, SO:0001217, UniParc:UPI00000546B7, UniRef:UniRef100_Q2FVZ7, UniRef:UniRef50_Q2FVZ7, UniRef:UniRef90_Q2FVZ7 contig_1 cds 2384028 2384345 + GCA000560365_02361 mspA membrane stabilizing protein MspA GO:0016020, RefSeq:WP_001161085.1, SO:0001217, UniParc:UPI00000D76DA, UniRef:UniRef100_Q2FVZ6, UniRef:UniRef50_Q2FVZ6, UniRef:UniRef90_Q2FVZ6 contig_1 cds 2384532 2387699 - GCA000560365_02362 acrB multidrug efflux RND transporter permease subunit AcrB COG:COG0841, COG:V, RefSeq:WP_000592303.1, SO:0001217, UniParc:UPI00000B1611, UniRef:UniRef100_Q2FVZ5, UniRef:UniRef50_Q2FVZ5, UniRef:UniRef90_Q2FVZ5 contig_1 cds 2387816 2389081 - GCA000560365_02363 femX lipid II:glycine glycyltransferase BlastRules:WP_000413865, COG:COG2348, COG:M, EC:2.3.2.16, GO:0005737, GO:0008360, GO:0009252, GO:0016755, GO:0046677, GO:0071555, KEGG:K11693, RefSeq:WP_000413865.1, SO:0001217, UniParc:UPI00000546DE, UniRef:UniRef100_Q2FVZ4, UniRef:UniRef50_Q2FVZ4, UniRef:UniRef90_Q2FVZ4 contig_1 cds 2389470 2389721 + GCA000560365_02364 hypothetical protein RefSeq:WP_001549681.1, SO:0001217, UniParc:UPI00000CA9A1, UniRef:UniRef100_Q2FVZ3, UniRef:UniRef50_Q2FVZ3, UniRef:UniRef90_Q2FVZ3 contig_1 cds 2389713 2390477 - GCA000560365_02365 Glyoxalase-like domain-containing protein RefSeq:WP_000600967.1, SO:0001217, UniParc:UPI00000546E8, UniRef:UniRef100_Q2FVZ2, UniRef:UniRef50_Q2FVZ2, UniRef:UniRef90_Q2FVZ2 contig_1 cds 2390639 2391079 + GCA000560365_02366 marR putative HTH-type transcriptional regulator SA2060 COG:COG1846, COG:K, GO:0003677, GO:0003700, GO:0006950, RefSeq:WP_000951059.1, SO:0001217, UniParc:UPI0000696CC5, UniRef:UniRef100_A0A5A8VS58, UniRef:UniRef50_Q6GEG9, UniRef:UniRef90_Q6GEG9 contig_1 cds 2391072 2392283 + GCA000560365_02367 araJ Major facilitator superfamily (MFS) profile domain-containing protein COG:COG2814, COG:G, RefSeq:WP_000184419.1, SO:0001217, UniParc:UPI00000546F4, UniRef:UniRef100_Q2FVZ0, UniRef:UniRef50_Q2FVZ0, UniRef:UniRef90_Q2FVZ0 contig_1 cds 2392385 2392735 - GCA000560365_02368 sarV HTH-type transcriptional regulator SarV BlastRules:WP_000066900, COG:COG1846, COG:K, GO:0003677, GO:0005737, GO:0006355, RefSeq:WP_000066900.1, SO:0001217, UniParc:UPI0000054708, UniRef:UniRef100_Q2FVY9, UniRef:UniRef50_Q2FVY9, UniRef:UniRef90_Q2FVY9 contig_1 ncRNA 2392988 2393260 + GCA000560365_02369 S35 Staphylococcus sRNA 35 (srn_0335) RFAM:RF02894, SO:0000655 contig_1 cds 2393426 2394448 - GCA000560365_02370 moaA GTP 3',8-cyclase MoaA COG:COG2896, COG:H, EC:4.1.99.22, GO:0005525, GO:0006777, GO:0046872, GO:0051539, GO:0061798, GO:0061799, GO:1904047, RefSeq:WP_000230173.1, SO:0001217, UniParc:UPI0000054728, UniRef:UniRef100_P69848, UniRef:UniRef50_P69848, UniRef:UniRef90_P69848 contig_1 cds 2394468 2395067 - GCA000560365_02371 mobA molybdenum cofactor guanylyltransferase MobA COG:COG0746, COG:H, EC:2.7.7.77, GO:0005525, GO:0005737, GO:0006777, GO:0046872, GO:0061603, RefSeq:WP_000643988.1, SO:0001217, UniParc:UPI0000054733, UniRef:UniRef100_Q2FVY4, UniRef:UniRef50_Q5HLY0, UniRef:UniRef90_Q2FVY4 contig_1 cds 2395074 2395307 - GCA000560365_02372 moaD molybdopterin converting factor subunit 1 COG:COG1977, COG:H, GO:0000166, GO:0003824, GO:0006777, GO:1990133, RefSeq:WP_000866971.1, SO:0001217, UniParc:UPI000005473D, UniRef:UniRef100_Q7A441, UniRef:UniRef50_Q7A441, UniRef:UniRef90_Q7A441 contig_1 cds 2395313 2395759 - GCA000560365_02373 moaE Molybdopterin synthase catalytic subunit COG:COG0314, COG:H, EC:2.8.1.12, GO:0006777, GO:0030366, KEGG:K03635, RefSeq:WP_000808500.1, SO:0001217, UniParc:UPI0000054752, UniRef:UniRef100_Q5HDT6, UniRef:UniRef50_Q9K8I7, UniRef:UniRef90_P65400 contig_1 cds 2395773 2396258 - GCA000560365_02374 mobB molybdopterin-guanine dinucleotide biosynthesis protein B COG:COG1763, COG:H, GO:0003824, GO:0005525, GO:0006777, RefSeq:WP_000602937.1, SO:0001217, UniParc:UPI000005475C, UniRef:UniRef100_Q2FVY1, UniRef:UniRef50_A0A380H3I1, UniRef:UniRef90_A0A0U1MRQ4 contig_1 cds 2396255 2397514 - GCA000560365_02375 glp gephyrin-like molybdotransferase Glp COG:COG0303, COG:H, EC:2.10.1.1, GO:0005829, GO:0006777, GO:0046872, GO:0061599, GO:1990586, RefSeq:WP_000259718.1, SO:0001217, UniParc:UPI0000054767, UniRef:UniRef100_Q5HDT4, UniRef:UniRef50_P65407, UniRef:UniRef90_P65407 contig_1 cds 2397577 2398071 + GCA000560365_02376 moaC cyclic pyranopterin monophosphate synthase MoaC COG:COG0315, COG:H, EC:4.6.1.17, GO:0006777, GO:0061799, KEGG:K03637, RefSeq:WP_000134528.1, SO:0001217, UniParc:UPI0000054768, UniRef:UniRef100_Q2FVX9, UniRef:UniRef50_Q2FVX9, UniRef:UniRef90_Q2FVX9 contig_1 cds 2398073 2398579 - GCA000560365_02377 moaB Molybdenum cofactor biosynthesis protein B COG:COG0521, COG:H, GO:0005829, GO:0006777, RefSeq:WP_000503817.1, SO:0001217, UniParc:UPI0000696CC6, UniRef:UniRef100_A0A0E8HMR4, UniRef:UniRef50_Q9ZIN3, UniRef:UniRef90_P65406 contig_1 cds 2398610 2399614 - GCA000560365_02378 thiF THIF-type NAD/FAD binding fold domain-containing protein COG:COG0476, COG:H, RefSeq:WP_000076929.1, SO:0001217, UniParc:UPI00004B5C9A, UniRef:UniRef100_Q2FVX7, UniRef:UniRef50_A0A380C5E9, UniRef:UniRef90_Q2FVX7 contig_1 cds 2399784 2400389 - GCA000560365_02379 modC ATP-binding cassette domain-containing protein COG:COG4148, COG:P, RefSeq:WP_000913019.1, SO:0001217, UniParc:UPI000005478D, UniRef:UniRef100_Q2FVX6, UniRef:UniRef50_A0A380G6T3, UniRef:UniRef90_A0A390QQI7 contig_1 cds 2400390 2401061 - GCA000560365_02380 modB molybdate ABC transporter permease subunit COG:COG4149, COG:P, GO:0005886, GO:0015412, GO:0015689, GO:0055052, RefSeq:WP_001113090.1, SO:0001217, UniParc:UPI0000696CC7, UniRef:UniRef100_A0A0E8HNL7, UniRef:UniRef50_A0AAJ4SFQ7, UniRef:UniRef90_A0A0E8HNL7 contig_1 cds 2401075 2401857 - GCA000560365_02381 modA molybdate ABC transporter substrate-binding protein COG:COG0725, COG:P, GO:0015412, GO:0015689, GO:0030288, GO:0030973, GO:0055052, RefSeq:WP_000769517.1, SO:0001217, UniParc:UPI00004B5C9B, UniRef:UniRef100_Q2FVX4, UniRef:UniRef50_Q4L8E3, UniRef:UniRef90_A0A0U1MSA4 contig_1 cds 2402147 2402944 + GCA000560365_02382 fdhD formate dehydrogenase accessory sulfurtransferase FdhD COG:C, COG:COG1526, GO:0005737, GO:0006777, GO:0009061, GO:0009326, GO:0015942, GO:0016783, GO:0097163, KEGG:K02379, RefSeq:WP_001030825.1, SO:0001217, UniParc:UPI00000547A4, UniRef:UniRef100_Q2FVX3, UniRef:UniRef50_P64120, UniRef:UniRef90_P64120 contig_1 cds 2403116 2403886 - GCA000560365_02383 N-acetyltransferase domain-containing protein RefSeq:WP_000146745.1, SO:0001217, UniParc:UPI00004B5C9C, UniRef:UniRef100_Q2FVX2, UniRef:UniRef50_Q2FVX2, UniRef:UniRef90_Q2FVX2 contig_1 cds 2403958 2404512 - GCA000560365_02384 bioY Biotin transporter COG:COG1268, COG:H, KEGG:K03523, RefSeq:WP_000208736.1, SO:0001217, UniParc:UPI00004B5C9D, UniRef:UniRef100_A0A0E7RMI7, UniRef:UniRef50_A0A0E7RMI7, UniRef:UniRef90_A0A0E7RMI7 contig_1 cds 2404633 2405574 - GCA000560365_02385 uRH1 Purine nucleosidase COG:COG1957, COG:F, RefSeq:WP_000163416.1, SO:0001217, UniParc:UPI00000D787E, UniRef:UniRef100_Q2FVX0, UniRef:UniRef50_A0A2S6DCG5, UniRef:UniRef90_A0A2S6DCG5 contig_1 cds 2405973 2406881 - GCA000560365_02386 fepB Fe/B12 periplasmic-binding domain-containing protein COG:COG0614, COG:P, RefSeq:WP_000735038.1, SO:0001217, UniParc:UPI00000547D7, UniRef:UniRef100_Q2FVW9, UniRef:UniRef50_A0A0S4MA85, UniRef:UniRef90_Q2FVW9 contig_1 cds 2407095 2408249 - GCA000560365_02387 caiA Acyl-CoA dehydrogenase COG:COG1960, COG:I, RefSeq:WP_000999205.1, SO:0001217, UniParc:UPI00000CA9D6, UniRef:UniRef100_Q2FVW8, UniRef:UniRef50_A0A380FY69, UniRef:UniRef90_A0A380DW78 contig_1 cds 2408466 2409371 - GCA000560365_02388 yut urea transporter COG:COG4413, COG:E, GO:0015204, GO:0015840, GO:0016020, RefSeq:WP_000691095.1, SO:0001217, UniParc:UPI00004B5C9E, UniRef:UniRef100_X5DZB1, UniRef:UniRef50_A0A0H3KEG3, UniRef:UniRef90_A0A0H3KEG3 contig_1 cds 2409631 2409933 + GCA000560365_02389 ureA urease subunit gamma COG:COG0831, COG:E, EC:3.5.1.5, GO:0005737, GO:0009039, GO:0016151, GO:0043419, RefSeq:WP_000545928.1, SO:0001217, UniParc:UPI00000D77A0, UniRef:UniRef100_Q2FVW5, UniRef:UniRef50_Q89UG3, UniRef:UniRef90_Q2FVW5 contig_1 cds 2409947 2410357 + GCA000560365_02390 ureB urease subunit beta COG:COG0832, COG:E, EC:3.5.1.5, GO:0009039, GO:0035550, GO:0043419, RefSeq:WP_000612128.1, SO:0001217, UniParc:UPI0000054802, UniRef:UniRef100_Q2G2K6, UniRef:UniRef50_Q4A0J4, UniRef:UniRef90_Q2YYQ7 contig_1 cds 2410354 2412069 + GCA000560365_02391 ureC urease subunit alpha COG:COG0804, COG:E, EC:3.5.1.5, GO:0005737, GO:0009039, GO:0016151, GO:0019627, GO:0043419, RefSeq:WP_000008673.1, SO:0001217, UniParc:UPI000005480D, UniRef:UniRef100_Q2G2K5, UniRef:UniRef50_P17086, UniRef:UniRef90_Q2G2K5 contig_1 ncRNA 2410505 2410807 - GCA000560365_02392 5_ureB_sRNA 5' ureB small RNA RFAM:RF02514, SO:0000655 contig_1 cds 2412082 2412534 + GCA000560365_02393 ureE urease accessory protein UreE COG:COG2371, COG:O, GO:0005737, GO:0006457, GO:0016151, GO:0019627, GO:0051082, GO:0065003, RefSeq:WP_000634589.1, SO:0001217, UniParc:UPI0000054814, UniRef:UniRef100_Q2G2K8, UniRef:UniRef50_Q2G2K8, UniRef:UniRef90_Q2G2K8 contig_1 cds 2412527 2413216 + GCA000560365_02394 ureF Urease accessory protein UreF COG:COG0830, COG:O, GO:0005737, GO:0016151, RefSeq:WP_000565255.1, SO:0001217, UniParc:UPI000005481F, UniRef:UniRef100_Q2G2K7, UniRef:UniRef50_Q2G2K7, UniRef:UniRef90_Q2G2K7 contig_1 cds 2413229 2413843 + GCA000560365_02395 ureG urease accessory protein UreG COG:COG0378, COG:O, GO:0003924, GO:0005525, GO:0005737, GO:0016151, GO:0016530, GO:0019627, GO:0043419, GO:0046872, KEGG:K03189, RefSeq:WP_000002973.1, SO:0001217, UniParc:UPI00000CAABE, UniRef:UniRef100_Q2G273, UniRef:UniRef50_P18319, UniRef:UniRef90_Q2G273 contig_1 cds 2413843 2414679 + GCA000560365_02396 ureD Urease accessory protein UreD COG:COG0829, COG:O, GO:0005737, GO:0016151, RefSeq:WP_000344352.1, SO:0001217, UniParc:UPI0000054834, UniRef:UniRef100_Q2G272, UniRef:UniRef50_Q2G272, UniRef:UniRef90_Q2G272 contig_1 ncRNA 2414732 2414816 - GCA000560365_02397 tsr33 S. aureus tsr33 small RNA RFAM:RF02582, SO:0000655 contig_1 cds 2414868 2415215 - GCA000560365_02398 sarR HTH-type transcriptional regulator SarR BlastRules:WP_000036076, EC:7.5.2.1, GO:0003677, GO:0003700, GO:0005737, GO:0006950, GO:0008643, GO:0015144, GO:0055085, RefSeq:WP_000036076.1, SO:0001217, UniParc:UPI00000D7855, UniRef:UniRef100_Q9F0R1, UniRef:UniRef50_P0AEX9, UniRef:UniRef90_Q9F0R1 contig_1 cds 2415643 2415969 - GCA000560365_02399 YokE-like PH domain-containing protein RefSeq:WP_000599587.1, SO:0001217, UniParc:UPI00004B5C9F, UniRef:UniRef100_Q2G270, UniRef:UniRef50_Q2G270, UniRef:UniRef90_Q2G270 contig_1 cds 2416033 2416776 - GCA000560365_02400 Transcriptional regulator SarA/SarZ/Rot-like helix-turn-helix domain-containing protein RefSeq:WP_000032855.1, SO:0001217, UniParc:UPI00004B5CA0, UniRef:UniRef100_A0A0E7R3Y1, UniRef:UniRef50_Q2G2J5, UniRef:UniRef90_Q2G2J5 contig_1 cds 2416802 2418757 - GCA000560365_02401 araC HTH araC/xylS-type domain-containing protein COG:COG2207, COG:K, RefSeq:WP_000131830.1, SO:0001217, UniParc:UPI0000696CC9, UniRef:UniRef100_A0A5A8VQU7, UniRef:UniRef50_Q2G2J4, UniRef:UniRef90_Q2G2J4 contig_1 cds 2419367 2420170 + GCA000560365_02402 ssaA2 Staphylococcal secretory antigen ssaA2 COG:COG3942, COG:M, GO:0005576, RefSeq:WP_000717381.1, SO:0001217, UniParc:UPI000005225C, UniRef:UniRef100_Q2G2J2, UniRef:UniRef50_Q2G2J2, UniRef:UniRef90_Q2G2J2 contig_1 ncRNA 2420171 2420602 + GCA000560365_02403 Teg23 S. aureus Teg23 small RNA RFAM:RF02583, SO:0000655 contig_1 cds 2420603 2422000 - GCA000560365_02404 nhaC Na+/H+ antiporter NhaC COG:C, COG:COG1757, GO:0006814, GO:0015297, GO:0015385, GO:0016020, GO:1902600, KEGG:K03315, SO:0001217, UniParc:UPI0002C953FC, UniRef:UniRef100_Q2G2J3, UniRef:UniRef50_A0A291JHU7, UniRef:UniRef90_A0A0E1XBW8 contig_1 cds 2422098 2423180 - GCA000560365_02405 gpsA 6-phosphogluconate dehydrogenase, decarboxylating COG:C, COG:COG0240, EC:1.5.1.28, KEGG:K04940, RefSeq:WP_000684567.1, SO:0001217, UniParc:UPI00000D7680, UniRef:UniRef100_Q2G1W0, UniRef:UniRef50_A0A7Z7QNB8, UniRef:UniRef90_A0A077UKH6 contig_1 cds 2423428 2423850 + GCA000560365_02406 tic20a DUF4870 domain-containing protein COG:COG3296, COG:R, KEGG:K09940, RefSeq:WP_000206108.1, SO:0001217, UniParc:UPI0000054358, UniRef:UniRef100_Q2G1V8, UniRef:UniRef50_Q2G1V8, UniRef:UniRef90_Q2G1V8 contig_1 cds 2424087 2424587 + GCA000560365_02407 ssaA Secretory antigen SsaA COG:COG3942, COG:M, RefSeq:WP_000737705.1, SO:0001217, UniParc:UPI000005434E, UniRef:UniRef100_Q2G1W1, UniRef:UniRef50_A0A2I7YA24, UniRef:UniRef90_A0A2I7YA24 contig_1 cds 2424949 2425902 + GCA000560365_02408 ldhA Putative 2-hydroxyacid dehydrogenase MW2224 COG:CHR, COG:COG1052, EC:1.1.1.-, GO:0016616, GO:0051287, RefSeq:WP_000417016.1, SO:0001217, UniParc:UPI0000054343, UniRef:UniRef100_Q2FVW4, UniRef:UniRef50_Q2FVW4, UniRef:UniRef90_Q2FVW4 contig_1 cds 2425994 2427118 - GCA000560365_02409 ubiH Salicylate hydroxylase COG:COG0654, COG:HC, RefSeq:WP_000684141.1, SO:0001217, UniParc:UPI0000054329, UniRef:UniRef100_Q2FVW3, UniRef:UniRef50_A0A380C5V0, UniRef:UniRef90_A0A2K4AFY1 contig_1 cds 2427429 2428205 - GCA000560365_02410 lytD Autolysin COG:COG4193, COG:G, RefSeq:WP_000739224.1, SO:0001217, UniParc:UPI000005431F, UniRef:UniRef100_Q2FVW2, UniRef:UniRef50_A0A170I2K6, UniRef:UniRef90_A0A170I2K6 contig_1 cds 2428227 2428460 - GCA000560365_02411 Group-Specific protein RefSeq:WP_000921246.1, SO:0001217, UniParc:UPI000069AB4E, UniRef:UniRef100_Q2FVW1, UniRef:UniRef50_A0A640MZA9, UniRef:UniRef90_Q2FVW1 contig_1 cds 2428688 2429161 - GCA000560365_02412 forE DUF1641 domain-containing protein COG:C, COG:COG2427, RefSeq:WP_000840811.1, SO:0001217, UniParc:UPI0000054318, UniRef:UniRef100_Q2FVW0, UniRef:UniRef50_Q2FVW0, UniRef:UniRef90_Q2FVW0 contig_1 cds 2429161 2432199 - GCA000560365_02413 fdhF formate dehydrogenase subunit alpha COG:C, COG:COG3383, EC:1.17.1.9, GO:0003954, GO:0008863, GO:0009326, GO:0015942, GO:0016020, GO:0022904, GO:0043546, GO:0046872, GO:0051537, GO:0051539, SO:0001217, UniParc:UPI0001E097FA, UniRef:UniRef100_Q2FVV9, UniRef:UniRef50_Q49ZN0, UniRef:UniRef90_Q99RW4 contig_1 cds 2432717 2433664 - GCA000560365_02414 cps2a LytR family transcriptional regulator COG:COG1316, COG:M, EC:2.7.8.-, KEGG:K01005, RefSeq:WP_000831055.1, SO:0001217, UniParc:UPI00000D775D, UniRef:UniRef100_Q2FVV8, UniRef:UniRef50_A0A640MZN0, UniRef:UniRef90_A0A077UH28 contig_1 cds 2433797 2434594 - GCA000560365_02415 suhB Inositol monophosphatase family protein COG:COG0483, COG:G, RefSeq:WP_000130454.1, SO:0001217, UniParc:UPI00000CAC44, UniRef:UniRef100_Q2FVV7, UniRef:UniRef50_Q2FVV7, UniRef:UniRef90_Q2FVV7 contig_1 ncRNA 2434688 2434831 - GCA000560365_02416 RsaOG RNA S.aureus Orsay G RFAM:RF01775, SO:0000655 contig_1 cds 2434979 2435671 + GCA000560365_02417 yobV HTH deoR-type domain-containing protein COG:COG2378, COG:K, RefSeq:WP_001030125.1, SO:0001217, UniParc:UPI00000D7807, UniRef:UniRef100_Q2FVV6, UniRef:UniRef50_Q2FVV6, UniRef:UniRef90_Q2FVV6 contig_1 ncRNA 2435712 2435932 - GCA000560365_02418 tsr24 S. aureus tsr24 small RNA RFAM:RF02577, SO:0000655 contig_1 cds 2436318 2437055 - GCA000560365_02419 sdpB CPBP family intramembrane metalloprotease SdpB BlastRules:WP_000426696, COG:COG1266, COG:O, RefSeq:WP_000426696.1, SO:0001217, UniParc:UPI00000D779E, UniRef:UniRef100_Q2FVV4, UniRef:UniRef50_Q2FVV4, UniRef:UniRef90_Q2FVV4 contig_1 cds 2437104 2437433 + GCA000560365_02420 Transmembrane protein RefSeq:WP_000606726.1, SO:0001217, UniParc:UPI00000542D6, UniRef:UniRef100_Q2FVV3, UniRef:UniRef50_Q2FVV3, UniRef:UniRef90_Q2FVV3 contig_1 cds 2437878 2438750 + GCA000560365_02421 rpiR MurR/RpiR family transcriptional regulator COG:COG1737, COG:K, RefSeq:WP_000073195.1, SO:0001217, UniParc:UPI00000D7730, UniRef:UniRef100_Q2FVV2, UniRef:UniRef50_Q2FVV2, UniRef:UniRef90_Q2FVV2 contig_1 cds 2439137 2440516 - GCA000560365_02422 ansP Amino acid permease/ SLC12A domain-containing protein COG:COG1113, COG:E, RefSeq:WP_000429674.1, SO:0001217, UniParc:UPI00000542BA, UniRef:UniRef100_Q2FVV1, UniRef:UniRef50_P27837, UniRef:UniRef90_Q2FVV1 contig_1 cds 2440796 2441152 + GCA000560365_02423 Group-Specific protein RefSeq:WP_000917664.1, SO:0001217, UniParc:UPI00000D9F7B, UniRef:UniRef100_Q2FVV0, UniRef:UniRef50_A0A640MZ73, UniRef:UniRef90_Q2FVV0 contig_1 cds 2441149 2441334 + GCA000560365_02424 Mid2-like cell wall stress sensor domain protein RefSeq:WP_000205307.1, SO:0001217, UniParc:UPI00000549F6, UniRef:UniRef100_Q2FVU9, UniRef:UniRef50_Q2FVU9, UniRef:UniRef90_Q2FVU9 contig_1 cds 2441430 2441618 - GCA000560365_02425 Haloacid dehalogenase-like hydrolase SO:0001217, UniParc:UPI0001BE5C4B, UniRef:UniRef100_Q2FVU8, UniRef:UniRef50_Q2FVU7, UniRef:UniRef90_Q2FVU8 contig_1 cds 2441632 2442267 - GCA000560365_02426 ycjU HAD family hydrolase COG:COG0637, COG:G, RefSeq:WP_000285450.1, SO:0001217, UniParc:UPI00000549F8, UniRef:UniRef100_Q2FVU7, UniRef:UniRef50_Q2FVU7, UniRef:UniRef90_Q2FVU7 contig_1 cds 2442342 2443259 - GCA000560365_02427 yfeH Bile acid:sodium symporter family protein COG:COG0385, COG:R, KEGG:K03453, RefSeq:WP_000486816.1, SO:0001217, UniParc:UPI00004B5CA3, UniRef:UniRef100_Q2FVU6, UniRef:UniRef50_Q2FVU6, UniRef:UniRef90_Q2FVU6 contig_1 cds 2443527 2444057 + GCA000560365_02428 Homing endonuclease LAGLIDADG domain-containing protein RefSeq:WP_000904065.1, SO:0001217, UniParc:UPI00000D765D, UniRef:UniRef100_Q2FVU5, UniRef:UniRef50_A0A974KZR7, UniRef:UniRef90_Q2FVU5 contig_1 cds 2444123 2445727 - GCA000560365_02429 ptsG2 Alpha-glucoside-specific PTS transporter subunit IIBC COG:COG1264, COG:G, EC:2.7.1.-, EC:2.7.1.208, KEGG:K02750, RefSeq:WP_000991502.1, SO:0001217, UniParc:UPI00000549FC, UniRef:UniRef100_Q2FVU4, UniRef:UniRef50_P31452, UniRef:UniRef90_A0A2W3AI92 contig_1 cds 2446057 2446821 + GCA000560365_02430 rpiR RpiR family transcriptional regulator COG:COG1737, COG:K, RefSeq:WP_000477992.1, SO:0001217, UniParc:UPI00004B5CA5, UniRef:UniRef100_Q2FVU3, UniRef:UniRef50_A0A0D1GF60, UniRef:UniRef90_A0A0D1GF60 contig_1 cds 2446879 2447385 - GCA000560365_02431 yndB Activator of Hsp90 ATPase-like ue 1/2-like C-terminal domain-containing protein COG:COG3832, COG:I, RefSeq:WP_001051556.1, SO:0001217, UniParc:UPI00000CAD43, UniRef:UniRef100_Q2FVU2, UniRef:UniRef50_Q2FVU2, UniRef:UniRef90_Q2FVU2 contig_1 cds 2447552 2448865 - GCA000560365_02432 nhaC Na+/H+ antiporter NhaC-like C-terminal domain-containing protein COG:C, COG:COG1757, RefSeq:WP_000451837.1, SO:0001217, UniParc:UPI00004B5CA6, UniRef:UniRef100_Q2FVU1, UniRef:UniRef50_G5JKB9, UniRef:UniRef90_G5JKB9 contig_1 ncRNA-region 2448942 2449037 - SAM riboswitch aptamer (S box leader) RFAM:RF00162, SO:0000140 contig_1 cds 2449090 2449659 - GCA000560365_02433 DUF3796 domain-containing protein RefSeq:WP_001185193.1, SO:0001217, UniParc:UPI0000054A00, UniRef:UniRef100_Q2FVT9, UniRef:UniRef50_A0A5S9I5V4, UniRef:UniRef90_Q2FVT9 contig_1 cds 2450146 2451027 - GCA000560365_02434 fabG SDR family oxidoreductase COG:COG1028, COG:I, RefSeq:WP_000730043.1, SO:0001217, UniParc:UPI0000054A01, UniRef:UniRef100_Q2FVT8, UniRef:UniRef50_D5DPI1, UniRef:UniRef90_Q2FVT8 contig_1 cds 2451138 2452259 - GCA000560365_02435 abgB Amidohydrolase COG:COG1473, COG:R, RefSeq:WP_000523151.1, SO:0001217, UniParc:UPI00004B5CA7, UniRef:UniRef100_A0A0E7Q410, UniRef:UniRef50_A0A0E7Q410, UniRef:UniRef90_A0A0E7Q410 contig_1 cds 2452536 2453774 - GCA000560365_02436 hutI imidazolonepropionase COG:COG1228, COG:Q, EC:3.5.2.7, GO:0005506, GO:0005737, GO:0008270, GO:0016812, GO:0019556, GO:0019557, GO:0050480, KEGG:K01468, RefSeq:WP_000998767.1, SO:0001217, UniParc:UPI0000054A04, UniRef:UniRef100_Q2FVT6, UniRef:UniRef50_Q2FVT6, UniRef:UniRef90_Q2FVT6 contig_1 cds 2453774 2455435 - GCA000560365_02437 hutU urocanate hydratase COG:COG2987, COG:E, EC:4.2.1.49, GO:0005737, GO:0006548, GO:0016153, GO:0019556, GO:0019557, KEGG:K01712, RefSeq:WP_001226823.1, SO:0001217, UniParc:UPI0000054A05, UniRef:UniRef100_Q5HDM6, UniRef:UniRef50_Q8XW28, UniRef:UniRef90_Q931G1 contig_1 cds 2455595 2456479 + GCA000560365_02438 lysR HTH lysR-type domain-containing protein COG:COG0583, COG:K, RefSeq:WP_000691839.1, SO:0001217, UniParc:UPI0000054A06, UniRef:UniRef100_Q2FVT4, UniRef:UniRef50_Q2FVT4, UniRef:UniRef90_Q2FVT4 contig_1 cds 2456601 2457020 + GCA000560365_02439 fosB FosB/FosD family fosfomycin resistance bacillithiol transferase COG:COG0346, COG:Q, EC:2.5.1.-, GO:0000287, GO:0005737, GO:0016765, GO:0046677, KEGG:K11210, NCBIProtein:WP_000920239.1, RefSeq:WP_000920239.1, SO:0001217, UniParc:UPI00000CAB5F, UniRef:UniRef100_Q2FVT3, UniRef:UniRef50_Q81RK2, UniRef:UniRef90_Q2FVT3 contig_1 cds 2457276 2458211 - GCA000560365_02440 hutG formimidoylglutamase COG:COG0010, COG:E, EC:3.5.3.8, GO:0008783, GO:0019556, GO:0019557, GO:0030145, GO:0033389, GO:0050415, KEGG:K01479, RefSeq:WP_000277968.1, SO:0001217, UniParc:UPI00000CAA06, UniRef:UniRef100_Q2FVT2, UniRef:UniRef50_Q2FVT2, UniRef:UniRef90_Q2FVT2 contig_1 cds 2458501 2459760 + GCA000560365_02441 sdpC CPBP family intramembrane metalloprotease SdpC BlastRules:WP_000794443, COG:COG1266, COG:O, GO:0004222, GO:0005886, GO:0071586, RefSeq:WP_000794442.1, SO:0001217, UniParc:UPI0000054A09, UniRef:UniRef100_Q2FVT1, UniRef:UniRef50_Q2FVT1, UniRef:UniRef90_Q2FVT1 contig_1 cds 2459826 2460512 - GCA000560365_02442 rpiA ribose 5-phosphate isomerase A COG:COG0120, COG:G, EC:5.3.1.6, GO:0004751, GO:0005829, GO:0006014, GO:0009052, RefSeq:WP_000655864.1, SO:0001217, UniParc:UPI0000054A0A, UniRef:UniRef100_P66694, UniRef:UniRef50_Q5HLQ9, UniRef:UniRef90_P66694 contig_1 cds 2460686 2461339 + GCA000560365_02443 yiiM MOSC domain-containing protein COG:COG2258, COG:FV, RefSeq:WP_000623452.1, SO:0001217, UniParc:UPI00004B5CAA, UniRef:UniRef100_A0A0D3QA71, UniRef:UniRef50_Q5HLQ8, UniRef:UniRef90_Q2FVS9 contig_1 cds 2461575 2462594 - GCA000560365_02444 galM Aldose 1-epimerase COG:COG2017, COG:G, RefSeq:WP_000634685.1, SO:0001217, UniParc:UPI0000054A0E, UniRef:UniRef100_Q2FVS7, UniRef:UniRef50_A0A0D6XRD3, UniRef:UniRef90_A0A2S6DDQ6 contig_1 cds 2462624 2462950 - GCA000560365_02445 ynfA YnfA family protein COG:COG1742, COG:R, GO:0005886, GO:0016020, RefSeq:WP_000966695.1, SO:0001217, UniParc:UPI0000054A0F, UniRef:UniRef100_Q2FVS6, UniRef:UniRef50_O31553, UniRef:UniRef90_Q2FVS6 contig_1 cds 2463168 2464400 - GCA000560365_02446 natB ABC-2 type transporter transmembrane domain-containing protein COG:COG1668, COG:CP, RefSeq:WP_000548707.1, SO:0001217, UniParc:UPI00004B5CAB, UniRef:UniRef100_Q2FVS4, UniRef:UniRef50_Q2FVS4, UniRef:UniRef90_Q2FVS4 contig_1 cds 2464393 2465292 - GCA000560365_02447 yhaQ ABC transporter domain-containing protein COG:COG4152, COG:R, RefSeq:WP_000524836.1, SO:0001217, UniParc:UPI0000054A12, UniRef:UniRef100_Q2FVS3, UniRef:UniRef50_Q2FVS3, UniRef:UniRef90_Q2FVS3 contig_1 cds 2465523 2466170 - GCA000560365_02448 yhaH DUF805 domain-containing protein COG:COG3152, COG:S, RefSeq:WP_000436818.1, SO:0001217, UniParc:UPI00004B5CAD, UniRef:UniRef100_Q2FVS2, UniRef:UniRef50_Q2FVS2, UniRef:UniRef90_Q2FVS2 contig_1 cds 2466569 2467177 + GCA000560365_02449 mpg Putative 3-methyladenine DNA glycosylase COG:COG2094, COG:L, EC:3.2.2.-, GO:0003677, GO:0003905, GO:0006284, RefSeq:WP_000348300.1, SO:0001217, UniParc:UPI0000054A15, UniRef:UniRef100_Q2FVS1, UniRef:UniRef50_Q2FVS1, UniRef:UniRef90_Q2FVS1 contig_1 cds 2467514 2468722 + GCA000560365_02450 gltS sodium/glutamate symporter COG:COG0786, COG:E, GO:0015501, GO:0015813, GO:0016020, KEGG:K03312, RefSeq:WP_000571584.1, SO:0001217, UniParc:UPI00003B18F4, UniRef:UniRef100_Q2FVS0, UniRef:UniRef50_A0A380G4D5, UniRef:UniRef90_A0A390UCJ6 contig_1 cds 2468770 2469819 - GCA000560365_02451 fni type 2 isopentenyl-diphosphate Delta-isomerase COG:CIR, COG:COG1304, EC:5.3.3.2, GO:0000287, GO:0004452, GO:0005737, GO:0008299, GO:0010181, GO:0016491, GO:0070402, RefSeq:WP_001279381.1, SO:0001217, UniParc:UPI0000054A18, UniRef:UniRef100_Q2FVR9, UniRef:UniRef50_Q2FVR9, UniRef:UniRef90_Q2FVR9 contig_1 cds 2469850 2470797 - GCA000560365_02452 corA magnesium/cobalt transporter CorA COG:COG0598, COG:P, GO:0006824, GO:0015087, GO:0015095, GO:0015693, GO:0016020, RefSeq:WP_001185431.1, SO:0001217, UniParc:UPI0000054A19, UniRef:UniRef100_Q2FVR8, UniRef:UniRef50_A0A2I7YA74, UniRef:UniRef90_A0A2I7YA74 contig_1 cds 2470894 2471385 + GCA000560365_02453 fadM Thioesterase COG:COG0824, COG:I, RefSeq:WP_000234728.1, SO:0001217, UniParc:UPI00004B5CAE, UniRef:UniRef100_Q2FVR7, UniRef:UniRef50_Q2FVR7, UniRef:UniRef90_Q2FVR7 contig_1 cds 2471382 2471801 + GCA000560365_02454 Phage protein RefSeq:WP_031808153.1, SO:0001217, UniParc:UPI000450AF93, UniRef:UniRef100_UPI000450AF93, UniRef:UniRef50_A0A7X9WGR3, UniRef:UniRef90_Q2G2W6 contig_1 cds 2471909 2472829 - GCA000560365_02455 aes Alpha/beta hydrolase fold-3 domain-containing protein COG:COG0657, COG:I, RefSeq:WP_000620864.1, SO:0001217, UniParc:UPI00000CAD49, UniRef:UniRef100_Q2G2W3, UniRef:UniRef50_Q2G2W3, UniRef:UniRef90_Q2G2W3 contig_1 cds 2473037 2473675 + GCA000560365_02456 Membrane protein RefSeq:WP_000184227.1, SO:0001217, UniParc:UPI00004B5CB0, UniRef:UniRef100_A0A0D3QA38, UniRef:UniRef50_A0A1S2MLM7, UniRef:UniRef90_Q2G2W2 contig_1 cds 2473921 2475852 - GCA000560365_02457 araJ Quinolone resistance protein NorB COG:COG2814, COG:G, KEGG:K03446, RefSeq:WP_000213873.1, SO:0001217, UniParc:UPI0000696CCC, UniRef:UniRef100_A0A1S6E7Y9, UniRef:UniRef50_Q9F0Z1, UniRef:UniRef90_Q9F0Z1 contig_1 cds 2475865 2476512 - GCA000560365_02458 emrA Membrane fusion protein biotin-lipoyl like domain-containing protein COG:COG1566, COG:V, RefSeq:WP_000738247.1, SO:0001217, UniParc:UPI0000054A1E, UniRef:UniRef100_Q2G2W5, UniRef:UniRef50_Q2G2W5, UniRef:UniRef90_Q2G2W5 contig_1 cds 2476633 2477184 + GCA000560365_02459 acrR HTH tetR-type domain-containing protein COG:COG1309, COG:K, RefSeq:WP_000828570.1, SO:0001217, UniParc:UPI0000054A1F, UniRef:UniRef100_Q2G2W4, UniRef:UniRef50_Q2G2W4, UniRef:UniRef90_Q2G2W4 contig_1 cds 2477414 2478622 - GCA000560365_02460 araJ Bcr/CflA family efflux transporter COG:COG2814, COG:G, KEGG:K07552, RefSeq:WP_000999131.1, SO:0001217, UniParc:UPI00000D7674, UniRef:UniRef100_Q9F4G1, UniRef:UniRef50_Q9F4G1, UniRef:UniRef90_Q9F4G1 contig_1 cds 2478891 2480273 - GCA000560365_02461 tcaA Membrane-associated protein TcaA COG:COG4640, COG:S, GO:0005886, GO:0046677, GO:0046872, KEGG:K21463, RefSeq:WP_000833797.1, SO:0001217, UniParc:UPI0000054A22, UniRef:UniRef100_Q2G2I1, UniRef:UniRef50_Q5HDJ9, UniRef:UniRef90_Q5HDJ9 contig_1 cds 2480513 2480968 - GCA000560365_02462 tcaR HTH-type transcriptional regulator TcaR COG:COG1846, COG:K, GO:0003677, GO:0003700, GO:0006950, KEGG:K21454, RefSeq:WP_000238542.1, SO:0001217, UniParc:UPI00000D778A, UniRef:UniRef100_Q9F4G3, UniRef:UniRef50_Q9F4G3, UniRef:UniRef90_Q9F4G3 contig_1 cds 2481163 2482131 + GCA000560365_02463 elyC DUF218 domain-containing protein COG:COG1434, COG:M, RefSeq:WP_001549718.1, SO:0001217, UniParc:UPI0000054A25, UniRef:UniRef100_Q2FVR4, UniRef:UniRef50_Q2FVR4, UniRef:UniRef90_Q2FVR4 contig_1 ncRNA 2482430 2482654 - GCA000560365_02464 tsr24 S. aureus tsr24 small RNA RFAM:RF02577, SO:0000655 contig_1 cds 2482706 2483062 + GCA000560365_02465 Truncated transposase SO:0001217, UniParc:UPI0000054A26, UniRef:UniRef100_Q2FVR2, UniRef:UniRef50_Q2FVR2, UniRef:UniRef90_Q2FVR2 contig_1 cds 2483202 2483867 - GCA000560365_02466 hrtA Putative hemin import ATP-binding protein HrtA COG:COG1136, COG:M, EC:7.6.2.-, GO:0005524, GO:0005886, GO:0016887, GO:0022857, RefSeq:WP_001229911.1, SO:0001217, UniParc:UPI0000054A27, UniRef:UniRef100_Q2FVR1, UniRef:UniRef50_Q99RR8, UniRef:UniRef90_Q99RR8 contig_1 cds 2483867 2484922 - GCA000560365_02467 hrtB Putative hemin transport system permease protein HrtB GO:0005886, KEGG:K09813, RefSeq:WP_000761395.1, SO:0001217, UniParc:UPI00000D769C, UniRef:UniRef100_Q2FVR0, UniRef:UniRef50_Q2FVR0, UniRef:UniRef90_Q2FVR0 contig_1 cds 2485058 2485732 + GCA000560365_02468 hssR DNA-binding heme response regulator HssR BlastRules:WP_000249498, COG:COG0745, COG:TK, GO:0000156, GO:0000976, GO:0005829, GO:0006355, GO:0032993, RefSeq:WP_000249497.1, SO:0001217, UniParc:UPI00000D76A0, UniRef:UniRef100_Q2FVQ9, UniRef:UniRef50_Q2FVQ9, UniRef:UniRef90_Q2FVQ9 contig_1 cds 2485725 2487098 + GCA000560365_02469 hssS heme sensor histidine kinase HssS BlastRules:WP_000477337, COG:COG0642, COG:T, EC:2.7.13.3, GO:0000155, GO:0005524, GO:0005886, RefSeq:WP_000477329.1, SO:0001217, UniParc:UPI0000054A2C, UniRef:UniRef100_Q2FVQ8, UniRef:UniRef50_Q2FVQ8, UniRef:UniRef90_Q2FVQ8 contig_1 cds 2487261 2487704 + GCA000560365_02470 lytTR putative HTH-type transcriptional regulator MW2284 COG:COG3289, COG:K, GO:0000156, GO:0003677, GO:0005737, RefSeq:WP_000977037.1, SO:0001217, UniParc:UPI0000054A2D, UniRef:UniRef100_Q2FVQ7, UniRef:UniRef50_Q2FVQ7, UniRef:UniRef90_Q2FVQ7 contig_1 cds 2487701 2488156 + GCA000560365_02471 DUF3021 domain-containing protein RefSeq:WP_000793169.1, SO:0001217, UniParc:UPI0000054A2E, UniRef:UniRef100_Q2FVQ6, UniRef:UniRef50_Q2FVQ6, UniRef:UniRef90_Q2FVQ6 contig_1 cds 2488222 2489700 - GCA000560365_02472 mqo malate dehydrogenase (quinone) COG:COG0579, COG:G, EC:1.1.5.4, GO:0006099, GO:0008924, GO:0047545, RefSeq:WP_000211359.1, SO:0001217, UniParc:UPI00004B5CB3, UniRef:UniRef100_Q5HDJ0, UniRef:UniRef50_C5DAE0, UniRef:UniRef90_P65421 contig_1 cds 2490081 2491679 - GCA000560365_02473 lldP L-lactate permease COG:C, COG:COG1620, RefSeq:WP_000960852.1, SO:0001217, UniParc:UPI0000696CCD, UniRef:UniRef100_A0A1S6C213, UniRef:UniRef50_Q9K5Z9, UniRef:UniRef90_A0A2X2JS03 contig_1 cds 2491996 2493669 + GCA000560365_02474 tagB CDP-glycerol glycerophosphotransferase family protein COG:COG1887, COG:MI, RefSeq:WP_000595298.1, SO:0001217, UniParc:UPI00004B5CB4, UniRef:UniRef100_Q2FVQ3, UniRef:UniRef50_Q2FVQ3, UniRef:UniRef90_Q2FVQ3 contig_1 cds 2493822 2494451 - GCA000560365_02475 putative lipoprotein SAV2368 GO:0005886, RefSeq:WP_000827000.1, SO:0001217, UniParc:UPI0000054A31, UniRef:UniRef100_Q2FVQ2, UniRef:UniRef50_Q2FVQ2, UniRef:UniRef90_Q2FVQ2 contig_1 cds 2494765 2495280 - GCA000560365_02476 rimI Protease synthase and sporulation negative regulatory protein PAI 1 COG:COG0456, COG:J, RefSeq:WP_000907311.1, SO:0001217, UniParc:UPI0000054A32, UniRef:UniRef100_Q2FVQ1, UniRef:UniRef50_A0A0U1MSC1, UniRef:UniRef90_A0A0U1MSC1 contig_1 cds 2495471 2496475 + GCA000560365_02477 qor Acryloyl-CoA reductase COG:COG0604, COG:CR, RefSeq:WP_000573242.1, SO:0001217, UniParc:UPI00000D9F96, UniRef:UniRef100_A0A2Y1TSU4, UniRef:UniRef50_A0A2Y1TSU4, UniRef:UniRef90_A0A2Y1TSU4 contig_1 cds 2496521 2496856 - GCA000560365_02478 N-acetyltransferase domain-containing protein RefSeq:WP_001549720.1, SO:0001217, UniParc:UPI000069AB58, UniRef:UniRef100_Q2FVP9, UniRef:UniRef50_Q2FVP9, UniRef:UniRef90_Q2FVP9 contig_1 cds 2496958 2497992 - GCA000560365_02479 Ferredoxin--NADP reductase EC:1.18.1.2, GO:0004324, GO:0050660, GO:0050661, KEGG:K21567, RefSeq:WP_000655971.1, SO:0001217, UniParc:UPI00004B5CB5, UniRef:UniRef100_Q2FVP8, UniRef:UniRef50_Q2FVP8, UniRef:UniRef90_Q2FVP8 contig_1 cds 2498224 2498655 - GCA000560365_02480 DUF2871 domain-containing protein RefSeq:WP_001253464.1, SO:0001217, UniParc:UPI0000054A38, UniRef:UniRef100_Q2FVP6, UniRef:UniRef50_Q2FVP6, UniRef:UniRef90_Q2FVP6 contig_1 cds 2498862 2500139 - GCA000560365_02481 yhgE Membrane protein, putative COG:COG1511, COG:S, KEGG:K01421, RefSeq:WP_001020023.1, SO:0001217, UniParc:UPI00004B5CB7, UniRef:UniRef100_Q2FVP4, UniRef:UniRef50_B9DJT1, UniRef:UniRef90_Q2FVP4 contig_1 cds 2500300 2500923 + GCA000560365_02482 acrR HTH tetR-type domain-containing protein COG:COG1309, COG:K, RefSeq:WP_000656771.1, SO:0001217, UniParc:UPI00000D76B8, UniRef:UniRef100_Q2FVP3, UniRef:UniRef50_Q2FVP3, UniRef:UniRef90_Q2FVP3 contig_1 cds 2500969 2501913 + GCA000560365_02483 corA Magnesium transporter CorA family protein COG:COG0598, COG:P, RefSeq:WP_000633068.1, SO:0001217, UniParc:UPI0000054A3C, UniRef:UniRef100_Q2FVP2, UniRef:UniRef50_Q2FVP2, UniRef:UniRef90_Q2FVP2 contig_1 cds 2501999 2503441 - GCA000560365_02484 ptsG2 protein-N(pi)-phosphohistidine--sucrose phosphotransferase COG:COG1264, COG:G, RefSeq:WP_001108126.1, SO:0001217, UniParc:UPI00000D9F9A, UniRef:UniRef100_A0A0D6H1J5, UniRef:UniRef50_P51184, UniRef:UniRef90_A0A7U7JRC9 contig_1 cds 2503624 2504007 + GCA000560365_02485 DUF1722 domain-containing protein RefSeq:WP_000664394.1, SO:0001217, UniParc:UPI00004B5CB8, UniRef:UniRef100_A0A0D3QAR4, UniRef:UniRef50_A0A0H3JX25, UniRef:UniRef90_A0A0H3JX25 contig_1 cds 2505495 2507600 + GCA000560365_02486 rsp AraC family transcriptional regulator Rsp COG:COG2207, COG:K, GO:0003700, GO:0006355, GO:0043565, RefSeq:WP_000128366.1, SO:0001217, UniParc:UPI000005456E, UniRef:UniRef100_Q2FVN8, UniRef:UniRef50_A0A0U1MT29, UniRef:UniRef90_A0A0U1MT29 contig_1 cds 2507671 2508093 + GCA000560365_02487 yzzA Pyridoxamine 5'-phosphate oxidase N-terminal domain-containing protein COG:COG3871, COG:S, RefSeq:WP_000071901.1, SO:0001217, UniParc:UPI00004B5CB9, UniRef:UniRef100_X5EGR8, UniRef:UniRef50_Q2FVN7, UniRef:UniRef90_Q2FVN7 contig_1 cds 2508358 2508714 + GCA000560365_02488 DUF4889 domain-containing protein RefSeq:WP_000727328.1, SO:0001217, UniParc:UPI0000054640, UniRef:UniRef100_Q2FVN6, UniRef:UniRef50_Q2FVN6, UniRef:UniRef90_Q2FVN6 contig_1 cds 2509118 2510395 - GCA000560365_02489 gltP Cation:dicarboxylase symporter family transporter COG:C, COG:COG1301, KEGG:K11102, RefSeq:WP_001173165.1, SO:0001217, UniParc:UPI00000D7873, UniRef:UniRef100_Q2FVN5, UniRef:UniRef50_Q2FVN5, UniRef:UniRef90_Q2FVN5 contig_1 cds 2510577 2510942 - GCA000560365_02490 DUF3139 domain-containing protein RefSeq:WP_000727537.1, SO:0001217, UniParc:UPI0000054770, UniRef:UniRef100_Q2FVN4, UniRef:UniRef50_Q2FVN4, UniRef:UniRef90_Q2FVN4 contig_1 cds 2511340 2511786 + GCA000560365_02491 sarZ HTH-type transcriptional regulator SarZ COG:COG1846, COG:K, GO:0003677, GO:0003700, GO:0005737, RefSeq:WP_000289213.1, SO:0001217, UniParc:UPI00000D9F9D, UniRef:UniRef100_Q2FVN3, UniRef:UniRef50_Q2FVN3, UniRef:UniRef90_Q2FVN3 contig_1 cds 2512008 2512430 + GCA000560365_02492 Crystallin SO:0001217, UniRef:UniRef50_Q2FVN2, UniRef:UniRef90_A0A0D1IXM8 contig_1 cds 2512537 2513706 - GCA000560365_02493 narT putative nitrate transporter NarT COG:COG2223, COG:P, GO:0005886, GO:0015112, GO:0042128, KEGG:K10850, RefSeq:WP_000278558.1, SO:0001217, UniParc:UPI00000D9F9E, UniRef:UniRef100_Q2FVN1, UniRef:UniRef50_Q2FVN1, UniRef:UniRef90_Q2FVN1 contig_1 cds 2514076 2514714 + GCA000560365_02494 yjaZ DUF2268 domain-containing protein COG:COG5504, COG:R, SO:0001217, UniParc:UPI0000054B83, UniRef:UniRef100_Q2FVN0, UniRef:UniRef50_Q2FVM9, UniRef:UniRef90_Q2FVN0 contig_1 cds 2514784 2514990 + GCA000560365_02495 yjaZ DUF2268 domain-containing protein COG:COG5504, COG:R, SO:0001217, UniParc:UPI0000054B84, UniRef:UniRef100_Q2FVM9, UniRef:UniRef50_Q2FVM9, UniRef:UniRef90_Q2FVN0 contig_1 cds 2514969 2515709 + GCA000560365_02496 soxR HTH merR-type domain-containing protein COG:COG0789, COG:K, RefSeq:WP_000332063.1, SO:0001217, UniParc:UPI00000522A1, UniRef:UniRef100_Q2FVM8, UniRef:UniRef50_Q2FVM8, UniRef:UniRef90_Q2FVM8 contig_1 cds 2515967 2516620 - GCA000560365_02497 nreC nitrate respiration regulation response regulator NreC BlastRules:WP_015901130, BlastRules:WP_016911488, COG:COG2197, COG:TK, GO:0000160, GO:0003677, GO:0005737, GO:0006355, RefSeq:WP_000706315.1, SO:0001217, UniParc:UPI00000D7876, UniRef:UniRef100_Q2FVM7, UniRef:UniRef50_Q7WZY4, UniRef:UniRef90_Q2FVM7 contig_1 cds 2516643 2517677 - GCA000560365_02498 nreB nitrate respiration regulation sensor histidine kinase NreB BlastRules:WP_000606551, BlastRules:WP_011274984, BlastRules:WP_015901131, COG:COG4585, COG:T, EC:2.7.13.3, GO:0000155, GO:0005506, GO:0005524, GO:0005737, GO:0016020, GO:0046983, GO:0051539, KEGG:K07683, RefSeq:WP_000606546.1, SO:0001217, UniParc:UPI0000054B87, UniRef:UniRef100_Q2FVM6, UniRef:UniRef50_Q7WZY5, UniRef:UniRef90_Q2FVM6 contig_1 cds 2517701 2518153 - GCA000560365_02499 nreA nitrate respiration regulation accessory nitrate sensor NreA COG:COG2203, COG:T, KEGG:K10851, RefSeq:WP_000186933.1, SO:0001217, UniParc:UPI00000D764F, UniRef:UniRef100_Q2FVM5, UniRef:UniRef50_Q2FVM5, UniRef:UniRef90_Q2FVM5 contig_1 cds 2518173 2518850 - GCA000560365_02500 narI respiratory nitrate reductase subunit gamma COG:COG2181, COG:CP, EC:1.7.99.4, GO:0008940, GO:0009325, GO:0019645, RefSeq:WP_000934151.1, SO:0001217, UniParc:UPI0000054B8A, UniRef:UniRef100_Q2FVM4, UniRef:UniRef50_A0A7U7PWT4, UniRef:UniRef90_A0A7U7PWT4 contig_1 cds 2518843 2519418 - GCA000560365_02501 narJ nitrate reductase molybdenum cofactor assembly chaperone COG:COG2180, COG:CPO, GO:0051082, GO:0051131, KEGG:K00373, RefSeq:WP_000606768.1, SO:0001217, UniParc:UPI00000CA9C7, UniRef:UniRef100_W8TTV0, UniRef:UniRef50_A0A0D0RML2, UniRef:UniRef90_W8TTV0 contig_1 cds 2519411 2520970 - GCA000560365_02502 narH nitrate reductase subunit beta COG:COG1140, COG:CP, EC:1.7.5.1, EC:1.7.99.-, EC:1.7.99.4, GO:0008940, GO:0009325, GO:0042126, KEGG:K00371, RefSeq:WP_000692645.1, SO:0001217, UniParc:UPI00000D9FA4, UniRef:UniRef100_Q2FVM2, UniRef:UniRef50_P11349, UniRef:UniRef90_A0A0U1MSV9 contig_1 cds 2520960 2524649 - GCA000560365_02503 narG nitrate reductase subunit alpha COG:COG5013, COG:CP, EC:1.7.5.1, EC:1.7.99.-, EC:1.7.99.4, GO:0008940, GO:0009325, GO:0042126, KEGG:K00370, RefSeq:WP_000514391.1, SO:0001217, UniParc:UPI0000054B8D, UniRef:UniRef100_Q2FVM1, UniRef:UniRef50_A0A127FDB7, UniRef:UniRef90_A0A2S6DTK4 contig_1 cds 2524958 2525935 - GCA000560365_02504 cysG uroporphyrinogen-III C-methyltransferase COG:COG0007, COG:H, RefSeq:WP_000109968.1, SO:0001217, UniParc:UPI00004B5CBD, UniRef:UniRef100_A0A0E7VD74, UniRef:UniRef50_A0A3A5LVF3, UniRef:UniRef90_A0A3A5LVF3 contig_1 cds 2525926 2526240 - GCA000560365_02505 nirD Nitrite reductase (NAD(P)H) small subunit COG:COG2146, COG:PQ, EC:1.7.1.4, KEGG:K26138, RefSeq:WP_000448222.1, SO:0001217, UniParc:UPI0000054B8F, UniRef:UniRef100_Q2FVL9, UniRef:UniRef50_A0A3A3AHT4, UniRef:UniRef90_A0A3A3AHT4 contig_1 cds 2526244 2528649 - GCA000560365_02506 nirB NAD(P)/FAD-dependent oxidoreductase COG:C, COG:COG1251, RefSeq:WP_001118736.1, SO:0001217, UniParc:UPI0000696CD1, UniRef:UniRef100_A0A0E8HHC4, UniRef:UniRef50_A0A380G539, UniRef:UniRef90_A0A3M9GSL0 contig_1 cds 2528715 2529446 - GCA000560365_02507 sirB Sirohydrochlorin chelatase COG:COG2138, COG:H, RefSeq:WP_001014062.1, SO:0001217, UniParc:UPI00004B5CBE, UniRef:UniRef100_Q2G1V2, UniRef:UniRef50_Q2G1V2, UniRef:UniRef90_Q2G1V2 contig_1 cds 2529676 2530212 - GCA000560365_02508 yhbS N-acetyltransferase domain-containing protein COG:COG3153, COG:R, EC:2.3.1.-, KEGG:K00680, RefSeq:WP_000169317.1, SO:0001217, UniParc:UPI00000CAC8F, UniRef:UniRef100_W8U3H5, UniRef:UniRef50_Q2G1V1, UniRef:UniRef90_Q2G1V1 contig_1 cds 2530445 2531269 - GCA000560365_02509 focA Formate/nitrite transporter, putative COG:COG2116, COG:P, RefSeq:WP_000572040.1, SO:0001217, UniParc:UPI00000D9FAA, UniRef:UniRef100_Q2G1V0, UniRef:UniRef50_Q2G1V0, UniRef:UniRef90_Q2G1V0 contig_1 cds 2531486 2531668 - GCA000560365_02510 hypothetical protein RefSeq:WP_000230294.1, SO:0001217, UniParc:UPI00000D9FAB, UniRef:UniRef100_Q2G1U7, UniRef:UniRef50_Q2G1U7, UniRef:UniRef90_Q2G1U7 contig_1 cds 2531752 2532219 - GCA000560365_02511 yndB Activator of Hsp90 ATPase-like ue 1/2-like C-terminal domain-containing protein COG:COG3832, COG:I, RefSeq:WP_000153344.1, SO:0001217, UniParc:UPI0000054B96, UniRef:UniRef100_Q2G1U9, UniRef:UniRef50_Q5HLI9, UniRef:UniRef90_Q2G1U9 contig_1 cds 2532405 2533955 - GCA000560365_02512 adcA zinc ABC transporter substrate-binding lipoprotein AdcA COG:COG3443, COG:P, RefSeq:WP_000727762.1, SO:0001217, UniParc:UPI00004B5CBF, UniRef:UniRef100_Q2G1U8, UniRef:UniRef50_A0A391LQP8, UniRef:UniRef90_A0A391LQP8 contig_1 cds 2534250 2534516 - GCA000560365_02513 Txe/YoeB family addiction module toxin COG:COG4115, COG:V, GO:0008219, RefSeq:WP_000113262.1, SO:0001217, UniParc:UPI0000054B98, UniRef:UniRef100_Q2G286, UniRef:UniRef50_A0A3A3ATA4, UniRef:UniRef90_A0A3A3ATA4 contig_1 cds 2534516 2534767 - GCA000560365_02514 stbD Antitoxin COG:COG2161, COG:V, KEGG:K19159, RefSeq:WP_000584502.1, SO:0001217, UniParc:UPI0000696CD2, UniRef:UniRef100_A0A5A8VWS3, UniRef:UniRef50_Q5DWE0, UniRef:UniRef90_A0A077UKZ8 contig_1 cds 2535040 2535639 - GCA000560365_02515 dsbG Thioredoxin-like fold domain-containing protein COG:COG1651, COG:O, RefSeq:WP_000162813.1, SO:0001217, UniParc:UPI0000054B9A, UniRef:UniRef100_Q2FVL7, UniRef:UniRef50_A0AAP8PPS4, UniRef:UniRef90_Q2FVL7 contig_1 cds 2535658 2536017 - GCA000560365_02516 DUF4467 domain-containing protein RefSeq:WP_000819847.1, SO:0001217, UniParc:UPI0001698BEA, UniRef:UniRef100_A0A1S5ZEY9, UniRef:UniRef50_A0A640MXZ4, UniRef:UniRef90_Q2FVL6 contig_1 cds 2536272 2537522 + GCA000560365_02517 fmhA FemA/FemB family glycyltransferase FmhA BlastRules:WP_001012222, COG:COG2348, COG:M, RefSeq:WP_001012222.1, SO:0001217, UniParc:UPI0000054B9C, UniRef:UniRef100_Q2FVL5, UniRef:UniRef50_B9DMC1, UniRef:UniRef90_Q9X4D6 contig_1 cds 2537619 2538350 - GCA000560365_02518 glnQ Amino acid ABC transporter, ATP-binding protein COG:COG1126, COG:E, RefSeq:WP_000615461.1, SO:0001217, UniParc:UPI0000054B9D, UniRef:UniRef100_Q2FVL4, UniRef:UniRef50_A0A564T2N1, UniRef:UniRef90_A0A0Z1CVJ0 contig_1 cds 2538347 2539075 - GCA000560365_02519 hisM Amino acid ABC transproter, permease protein, putative COG:COG0765, COG:E, SO:0001217, UniParc:UPI00004B5CC3, UniRef:UniRef100_Q2FVL3, UniRef:UniRef50_B9DL82, UniRef:UniRef90_Q2FVL3 contig_1 cds 2539047 2539826 - GCA000560365_02520 hisJ Amino acid ABC transporter substrate-binding protein COG:COG0834, COG:ET, RefSeq:WP_000825929.1, SO:0001217, UniParc:UPI0000054BA0, UniRef:UniRef100_Q2FVL2, UniRef:UniRef50_B9DL83, UniRef:UniRef90_Q2FVL2 contig_1 cds 2539947 2541386 - GCA000560365_02521 mdeA multidrug efflux MFS transporter MdeA BlastRules:WP_000038968, COG:COG2814, COG:G, RefSeq:WP_000038961.1, SO:0001217, UniParc:UPI00015FD760, UniRef:UniRef100_A0A0D6H0H7, UniRef:UniRef50_A0A660A2M0, UniRef:UniRef90_A0A660A2M0 contig_1 cds 2541560 2541664 + GCA000560365_02522 Metal homeostasis protein RefSeq:WP_000762708.1, SO:0001217, UniParc:UPI0000054BA3, UniRef:UniRef100_Q2FVK9, UniRef:UniRef50_Q49ZZ1, UniRef:UniRef90_G5JKK3 contig_1 cds 2541818 2542504 - GCA000560365_02523 gpmA 2,3-diphosphoglycerate-dependent phosphoglycerate mutase COG:COG0588, COG:G, EC:5.4.2.11, GO:0006094, GO:0006096, GO:0046538, KEGG:K01834, RefSeq:WP_001125208.1, SO:0001217, UniParc:UPI0000054BA4, UniRef:UniRef100_Q2FVK8, UniRef:UniRef50_Q9CIM0, UniRef:UniRef90_Q2FVK8 contig_1 cds 2542831 2543697 - GCA000560365_02524 fieF Cation efflux protein cytoplasmic domain-containing protein COG:COG0053, COG:P, KEGG:K13283, RefSeq:WP_000019127.1, SO:0001217, UniParc:UPI00000D78A0, UniRef:UniRef100_Q2FVK7, UniRef:UniRef50_Q2FVK7, UniRef:UniRef90_Q2FVK7 contig_1 cds 2544449 2545759 + GCA000560365_02525 sbi immunoglobulin-binding protein Sbi BlastRules:WP_000792564, GO:0005576, GO:0005886, GO:0019864, KEGG:K14197, RefSeq:WP_000792564.1, SO:0001217, UniParc:UPI0000052259, UniRef:UniRef100_Q2FVK5, UniRef:UniRef50_Q931F4, UniRef:UniRef90_Q931F4 contig_1 cds 2546259 2547224 + GCA000560365_02526 hlgA bi-component gamma-hemolysin HlgAB subunit A BlastRules:WP_000594519, GO:0005576, GO:0051715, GO:0090729, NCBIProtein:AUU54669.1, SO:0001217, UniParc:UPI0000054BA7, UniRef:UniRef100_Q5HDD6, UniRef:UniRef50_O54081, UniRef:UniRef90_Q5HDD6 contig_1 cds 2547791 2548738 + GCA000560365_02527 hlgC bi-component gamma-hemolysin HlgCB subunit C GO:0005576, GO:0051715, GO:0090729, NCBIProtein:CAA57277.1, RefSeq:WP_000916713.1, SO:0001217, UniParc:UPI000012C93F, UniRef:UniRef100_Q2FVK2, UniRef:UniRef50_O54081, UniRef:UniRef90_P31716, VFDB:VFC0235, VFDB:VFG001274 contig_1 cds 2548740 2549717 + GCA000560365_02528 hlgB bi-component gamma-hemolysin HlgAB/HlgCB subunit B GO:0005576, GO:0051715, GO:0090729, NCBIProtein:CAA57278.1, RefSeq:WP_000783428.1, SO:0001217, UniParc:UPI0000046EFC, UniRef:UniRef100_Q2FVK1, UniRef:UniRef50_Q2FVK1, UniRef:UniRef90_Q2FVK1, VFDB:VFC0235, VFDB:VFG001275 contig_1 cds 2549769 2550236 - GCA000560365_02529 queT QueT transporter family protein RefSeq:WP_000200948.1, SO:0001217, UniParc:UPI0000696CD5, UniRef:UniRef100_Q2FVK0, UniRef:UniRef50_Q2FVK0, UniRef:UniRef90_Q2FVK0 contig_1 cds 2550247 2550939 - GCA000560365_02530 bioW 6-carboxyhexanoate--CoA ligase COG:COG1424, COG:H, EC:6.2.1.14, GO:0000287, GO:0005524, GO:0009102, GO:0042410, KEGG:K01906, RefSeq:WP_000286875.1, SO:0001217, UniParc:UPI00000CAA5A, UniRef:UniRef100_Q2FVJ9, UniRef:UniRef50_Q2FVJ9, UniRef:UniRef90_Q2FVJ9 contig_1 cds 2550950 2552065 - GCA000560365_02531 bioF 8-amino-7-oxononanoate synthase COG:COG0156, COG:H, RefSeq:WP_000671751.1, SO:0001217, UniParc:UPI00004B5CC6, UniRef:UniRef100_Q2FVJ8, UniRef:UniRef50_A0A2I7YAG2, UniRef:UniRef90_A0A2I7YAG2 contig_1 cds 2552043 2553050 - GCA000560365_02532 bioB biotin synthase BioB COG:COG0502, COG:H, EC:2.8.1.6, GO:0004076, GO:0005506, GO:0009102, GO:0051536, GO:0051537, GO:0051539, GO:1904047, KEGG:K01012, RefSeq:WP_001046646.1, SO:0001217, UniParc:UPI0000054BAE, UniRef:UniRef100_Q2FVJ7, UniRef:UniRef50_Q81MB3, UniRef:UniRef90_Q2FVJ7 contig_1 cds 2553052 2554410 - GCA000560365_02533 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase COG:COG0161, COG:H, EC:2.6.1.62, GO:0004015, GO:0005737, GO:0009102, GO:0030170, KEGG:K00833, RefSeq:WP_001110064.1, SO:0001217, UniParc:UPI0000054BAF, UniRef:UniRef100_Q2FVJ6, UniRef:UniRef50_Q2FVJ6, UniRef:UniRef90_Q2FVJ6 contig_1 cds 2554388 2555074 - GCA000560365_02534 bioD dethiobiotin synthase COG:COG0132, COG:H, EC:6.3.3.3, GO:0000287, GO:0004141, GO:0005524, GO:0009102, KEGG:K01935, RefSeq:WP_001217917.1, SO:0001217, UniParc:UPI00004B5CC7, UniRef:UniRef100_Q2FVJ5, UniRef:UniRef50_Q5HKF0, UniRef:UniRef90_A0A3A5LQG2 contig_1 ncRNA 2555174 2555460 + GCA000560365_02535 rsaJ RNA Staph. aureus A RFAM:RF01822, SO:0000655 contig_1 cds 2555526 2557259 - GCA000560365_02536 mdlB ABC transporter ATP-binding protein COG:COG1132, COG:V, RefSeq:WP_000486494.1, SO:0001217, UniParc:UPI0000054BB1, UniRef:UniRef100_Q2FVJ2, UniRef:UniRef50_Q2FVJ2, UniRef:UniRef90_Q2FVJ2 contig_1 cds 2557284 2559047 - GCA000560365_02537 mdlB ABC transporter ATP-binding protein COG:COG1132, COG:V, RefSeq:WP_001064838.1, SO:0001217, UniParc:UPI00004B5CCA, UniRef:UniRef100_Q2FVJ1, UniRef:UniRef50_Q2FVJ1, UniRef:UniRef90_Q2FVJ1 contig_1 ncRNA 2559283 2559533 + GCA000560365_02538 S35 Staphylococcus sRNA 35 (srn_0335) RFAM:RF02894, SO:0000655 contig_1 ncRNA 2559643 2559739 + GCA000560365_02539 fstAT Fst antitoxin sRNA RFAM:RF01797, SO:0000655 contig_1 cds 2559916 2560302 - GCA000560365_02540 gtxA flippase GtxA BlastRules:WP_000779358, COG:COG2246, COG:I, RefSeq:WP_000779358.1, SO:0001217, UniParc:UPI0000054BB6, UniRef:UniRef100_Q2FVI8, UniRef:UniRef50_Q2FVI8, UniRef:UniRef90_Q2FVI8 contig_1 cds 2560570 2561712 + GCA000560365_02541 glxK Glycerate kinase COG:COG1929, COG:G, EC:2.7.1.165, KEGG:K00865, RefSeq:WP_001176863.1, SO:0001217, UniParc:UPI00000CAB7C, UniRef:UniRef100_Q2FVI7, UniRef:UniRef50_A0A0U1MSN1, UniRef:UniRef90_A0A0U1MSN1 contig_1 cds 2561772 2562431 + GCA000560365_02542 hypothetical protein RefSeq:WP_000831298.1, SO:0001217, UniParc:UPI00000CAD76, UniRef:UniRef100_Q2FVI6, UniRef:UniRef50_Q2FVI6, UniRef:UniRef90_Q2FVI6 contig_1 cds 2562613 2563824 + GCA000560365_02543 araJ Bcr/CflA family efflux transporter COG:COG2814, COG:G, KEGG:K07552, RefSeq:WP_001192075.1, SO:0001217, UniParc:UPI00000522E0, UniRef:UniRef100_Q2FVI5, UniRef:UniRef50_Q2FVI5, UniRef:UniRef90_Q2FVI5 contig_1 cds 2563947 2564420 - GCA000560365_02544 ydeE Bacterial transcription activator effector binding domain-containing protein COG:COG3708, COG:K, RefSeq:WP_000456489.1, SO:0001217, UniParc:UPI0000054BB9, UniRef:UniRef100_Q2FVI4, UniRef:UniRef50_A0A7U7IFB2, UniRef:UniRef90_A0A7U7IFB2 contig_1 cds 2564533 2565189 + GCA000560365_02545 yvpB Peptidase C39-like domain-containing protein COG:COG4990, COG:R, RefSeq:WP_001080281.1, SO:0001217, UniParc:UPI00000D7887, UniRef:UniRef100_Q2FVI3, UniRef:UniRef50_Q2FVI3, UniRef:UniRef90_Q2FVI3 contig_1 cds 2565252 2566058 - GCA000560365_02546 cpdA Calcineurin-like phosphoesterase domain-containing protein COG:COG1409, COG:T, RefSeq:WP_000690197.1, SO:0001217, UniParc:UPI00004B5CCB, UniRef:UniRef100_Q2FVI2, UniRef:UniRef50_Q2FVI2, UniRef:UniRef90_Q2FVI2 contig_1 cds 2566344 2567753 + GCA000560365_02547 D-serine/D-alanine/glycine transporter RefSeq:WP_000101538.1, SO:0001217, UniParc:UPI0000054BBC, UniRef:UniRef100_Q2FVI1, UniRef:UniRef50_Q2FXN2, UniRef:UniRef90_A0A077UKT4 contig_1 cds 2567891 2569969 + GCA000560365_02548 nhaP Cation/H+ exchanger transmembrane domain-containing protein COG:COG0025, COG:P, KEGG:K24163, RefSeq:WP_001185692.1, SO:0001217, UniParc:UPI0000054BBE, UniRef:UniRef100_Q2FVI0, UniRef:UniRef50_Q2FVI0, UniRef:UniRef90_Q2FVI0 contig_1 cds 2570109 2571938 - GCA000560365_02549 Putative cyclic di-AMP transporter RefSeq:WP_000483049.1, SO:0001217, UniParc:UPI0000054BC0, UniRef:UniRef100_Q2FVH8, UniRef:UniRef50_P96589, UniRef:UniRef90_A0A7U7PXE9 contig_1 cds 2572170 2573666 + GCA000560365_02550 flp Protein flp COG:COG1680, COG:V, GO:0005886, RefSeq:WP_000208576.1, SO:0001217, UniParc:UPI0000696CD7, UniRef:UniRef100_A0A0E7QCY4, UniRef:UniRef50_Q2FVH6, UniRef:UniRef90_Q2FVH6 contig_1 cds 2573758 2574609 - GCA000560365_02551 wcaG MW2366 protein COG:COG0451, COG:M, RefSeq:WP_000034507.1, SO:0001217, UniParc:UPI00004B5CCE, UniRef:UniRef100_Q2FVH5, UniRef:UniRef50_B9DIE7, UniRef:UniRef90_A0A0H3K1K1 contig_1 cds 2574931 2575866 - GCA000560365_02552 panE 2-dehydropantoate 2-reductase COG:COG1893, COG:H, RefSeq:WP_000684056.1, SO:0001217, UniParc:UPI0000054BC6, UniRef:UniRef100_Q2FVH3, UniRef:UniRef50_A0A0U1EBN6, UniRef:UniRef90_A0A2S6D1V7 contig_1 cds 2576092 2577492 - GCA000560365_02553 proP Quinolone resistance protein NorB COG:COG0477, COG:GEPR, KEGG:K08170, RefSeq:WP_000381270.1, SO:0001217, UniParc:UPI0000054BC7, UniRef:UniRef100_Q2FVH2, UniRef:UniRef50_Q2FYJ5, UniRef:UniRef90_A0AAJ4YV50 contig_1 cds 2577786 2578481 - GCA000560365_02554 opuBB Glycine betaine/carnitine/choline/choline sulfate ABC transporter (Permease) COG:COG1174, COG:E, RefSeq:WP_000398941.1, SO:0001217, UniParc:UPI0000054BC8, UniRef:UniRef100_Q2FVH1, UniRef:UniRef50_P39775, UniRef:UniRef90_A0A0U1MTP7 contig_1 cds 2578481 2579422 - GCA000560365_02555 osmF Glycine betaine/carnitine/choline/choline sulfate ABC transporter (Osmoprotectant-binding lipoprotein) COG:COG1732, COG:M, RefSeq:WP_000721553.1, SO:0001217, UniParc:UPI0000054BC9, UniRef:UniRef100_Q2FVH0, UniRef:UniRef50_Q45462, UniRef:UniRef90_A0A7U7JR79 contig_1 cds 2579439 2580074 - GCA000560365_02556 opuBB Glycine betaine/carnitine/choline/choline sulfate ABC transporter (Permease) COG:COG1174, COG:E, RefSeq:WP_000569120.1, SO:0001217, UniParc:UPI0000054BCA, UniRef:UniRef100_Q2FVG9, UniRef:UniRef50_O34878, UniRef:UniRef90_A0A0U1MSP2 contig_1 cds 2580071 2581297 - GCA000560365_02557 opuBA Quaternary amine transport ATP-binding protein COG:COG1125, COG:E, RefSeq:WP_000948970.1, SO:0001217, UniParc:UPI0000696CD8, UniRef:UniRef100_A0A5A8VN53, UniRef:UniRef50_Q45460, UniRef:UniRef90_A0A7U7JRH5 contig_1 cds 2581967 2582566 - GCA000560365_02558 ydeI YdhG-like domain-containing protein COG:COG4430, COG:S, RefSeq:WP_001291519.1, SO:0001217, UniParc:UPI00000CAF3B, UniRef:UniRef100_Q2FVG5, UniRef:UniRef50_A0A1E9A998, UniRef:UniRef90_A0A7U7JR81 contig_1 cds 2582746 2584383 + GCA000560365_02559 potE APC family permease COG:COG0531, COG:E, RefSeq:WP_031808154.1, SO:0001217, UniParc:UPI00044C4DEF, UniRef:UniRef100_UPI00044C4DEF, UniRef:UniRef50_A0A4U9TDF7, UniRef:UniRef90_Q2FVG4 contig_1 ncRNA 2584523 2584752 - GCA000560365_02560 S35 Staphylococcus sRNA 35 (srn_0335) RFAM:RF02894, SO:0000655 contig_1 cds 2584991 2586343 + GCA000560365_02561 pnbA Carboxylic ester hydrolase COG:COG2272, COG:I, RefSeq:WP_000700921.1, SO:0001217, UniParc:UPI0000054BCE, UniRef:UniRef100_Q2FVG3, UniRef:UniRef50_A0A0H2WZR3, UniRef:UniRef90_A0A0H2WZR3 contig_1 cds 2586405 2587592 - GCA000560365_02562 araJ Major facilitator superfamily (MFS) profile domain-containing protein COG:COG2814, COG:G, RefSeq:WP_000026194.1, SO:0001217, UniParc:UPI00000D9FC5, UniRef:UniRef100_Q2FVG2, UniRef:UniRef50_Q2FVG2, UniRef:UniRef90_Q2FVG2 contig_1 cds 2587988 2588764 - GCA000560365_02563 fetB ABC superfamily ATP binding cassette transporter, membrane protein COG:COG0390, COG:P, KEGG:K02069, RefSeq:WP_000072147.1, SO:0001217, UniParc:UPI0000054BD0, UniRef:UniRef100_Q2FVG1, UniRef:UniRef50_A0A0D0SFV4, UniRef:UniRef90_A0A3A3AVI9 contig_1 cds 2588757 2589419 - GCA000560365_02564 ATP-binding cassette domain-containing protein RefSeq:WP_000923520.1, SO:0001217, UniParc:UPI00004B5CD5, UniRef:UniRef100_Q2FVG0, UniRef:UniRef50_A0A0D0SPN6, UniRef:UniRef90_A0A6B1RL06 contig_1 cds 2589667 2590743 - GCA000560365_02565 frvX Endoglucanase M COG:COG1363, COG:EG, RefSeq:WP_001076671.1, SO:0001217, UniParc:UPI00000D9FC8, UniRef:UniRef100_Q2FVF9, UniRef:UniRef50_A0A390YIZ1, UniRef:UniRef90_A0A390YIZ1 contig_1 cds 2591098 2591364 - GCA000560365_02566 Txe/YoeB family addiction module toxin COG:COG4115, COG:V, GO:0008219, RefSeq:WP_000074048.1, SO:0001217, UniParc:UPI00000D9FC9, UniRef:UniRef100_Q2FVF8, UniRef:UniRef50_Q2FVF8, UniRef:UniRef90_Q2FVF8 contig_1 cds 2591364 2591621 - GCA000560365_02567 stbD Antitoxin COG:COG2161, COG:V, KEGG:K19159, RefSeq:WP_000587616.1, SO:0001217, UniParc:UPI0000054859, UniRef:UniRef100_Q2FVF7, UniRef:UniRef50_A0A8G2HZW6, UniRef:UniRef90_A0A8G2HZW6 contig_1 cds 2591980 2592435 + GCA000560365_02568 yehR DUF1307 domain-containing protein COG:COG4808, COG:S, RefSeq:WP_000732082.1, SO:0001217, UniParc:UPI00000D9FCA, UniRef:UniRef100_Q2FVF5, UniRef:UniRef50_A0A2T4PYL1, UniRef:UniRef90_Q2FVF5 contig_1 cds 2592603 2594180 - GCA000560365_02569 gltB2 FMN-binding glutamate synthase family protein COG:COG0069, COG:E, RefSeq:WP_000143503.1, SO:0001217, UniParc:UPI00004B5CD7, UniRef:UniRef100_Q2FVF4, UniRef:UniRef50_A0A2S6D1V6, UniRef:UniRef90_A0A2S6D1V6 contig_1 cds 2594375 2595124 + GCA000560365_02570 lnsB CPBP family lipoprotein N-acylation protein LnsB EC:2.3.1.-, KEGG:K27958, RefSeq:WP_000072444.1, SO:0001217, UniParc:UPI0000696CD9, UniRef:UniRef100_A0A1S5ZNI4, UniRef:UniRef50_Q2FVF3, UniRef:UniRef90_Q2FVF3 contig_1 cds 2595348 2596541 - GCA000560365_02571 cntE staphylopine family metallophore export MFS transporter CntE COG:COG2814, COG:G, GO:0005886, GO:0022857, RefSeq:WP_000675401.1, SO:0001217, UniParc:UPI000005485F, UniRef:UniRef100_A0A0H3JTK0, UniRef:UniRef50_A0A0H3JTK0, UniRef:UniRef90_A0A0H3JTK0 contig_1 cds 2596553 2597302 - GCA000560365_02572 cntF Metal-staphylopine import system ATP-binding protein CntF COG:COG1124, COG:EP, EC:7.2.2.-, GO:0005524, GO:0005886, GO:0006824, GO:0006829, GO:0015675, GO:0016887, RefSeq:WP_000590517.1, SO:0001217, UniParc:UPI00004B5CD9, UniRef:UniRef100_Q2FVF1, UniRef:UniRef50_Q2FVF1, UniRef:UniRef90_Q2FVF1 contig_1 cds 2597295 2598110 - GCA000560365_02573 cntD staphylopine uptake ABC transporter ATP-binding protein CntD COG:COG0444, COG:EP, EC:7.2.2.-, GO:0005524, GO:0005886, GO:0006824, GO:0006825, GO:0006826, GO:0006829, GO:0015675, GO:0016887, RefSeq:WP_000173869.1, SO:0001217, UniParc:UPI0000054861, UniRef:UniRef100_Q2FVF0, UniRef:UniRef50_Q2FVF0, UniRef:UniRef90_Q2FVF0 contig_1 cds 2598107 2598976 - GCA000560365_02574 cntC staphylopine uptake ABC transporter permease subunit CntC COG:COG1173, COG:EP, GO:0005886, GO:0006824, GO:0006825, GO:0006826, GO:0006829, GO:0015675, RefSeq:WP_000584765.1, SO:0001217, UniParc:UPI0000054862, UniRef:UniRef100_Q2FVE9, UniRef:UniRef50_Q2FVE9, UniRef:UniRef90_Q2FVE9 contig_1 cds 2598973 2599908 - GCA000560365_02575 opp1B nickel/cobalt ABC transporter permease COG:COG0601, COG:EP, GO:0005886, GO:0006824, GO:0006825, GO:0006826, GO:0006829, GO:0015675, GO:0043190, GO:0140359, RefSeq:WP_000472235.1, SO:0001217, UniParc:UPI0000054863, UniRef:UniRef100_Q2FVE8, UniRef:UniRef50_Q2FVE8, UniRef:UniRef90_Q2FVE8 contig_1 cds 2599921 2601519 - GCA000560365_02576 cntA staphylopine-dependent metal ABC transporter substrate-binding protein CntA BlastRules:WP_001229077, BlastRules:WP_002496571, COG:COG0747, COG:E, GO:0006824, GO:0006825, GO:0006826, GO:0006829, GO:0015675, GO:0015833, GO:0016151, GO:0020037, GO:0030288, GO:0043190, GO:1904680, RefSeq:WP_001229077.1, SO:0001217, UniParc:UPI0000696CDA, UniRef:UniRef100_A0A068A9N4, UniRef:UniRef50_Q2FVE7, UniRef:UniRef90_Q2FVE7 contig_1 cds 2601662 2602963 - GCA000560365_02577 cntM staphylopine dehydrogenase CntM BlastRules:WP_096659686, COG:COG4408, COG:S, EC:1.5.1.52, GO:0016491, KEGG:K23122, RefSeq:WP_000040575.1, SO:0001217, UniParc:UPI00015FD778, UniRef:UniRef100_A0A0G2LVZ8, UniRef:UniRef50_A0A0H3JT80, UniRef:UniRef90_A0A0H3JT80 contig_1 cds 2602956 2603774 - GCA000560365_02578 cntL D-histidine (S)-2-aminobutanoyltransferase CntL BlastRules:WP_001058843, EC:2.5.1.152, GO:0030410, GO:0030418, RefSeq:WP_001058843.1, SO:0001217, UniParc:UPI0000054866, UniRef:UniRef100_Q2FVE5, UniRef:UniRef50_A0A0H3JXA8, UniRef:UniRef90_A0A0H3JXA8 contig_1 cds 2603785 2604606 - GCA000560365_02579 cntK histidine racemase CntK COG:COG0253, COG:E, EC:5.1.1.24, GO:0016853, KEGG:K01780, RefSeq:WP_001081682.1, SO:0001217, UniParc:UPI0000054868, UniRef:UniRef100_Q2FVE4, UniRef:UniRef50_A0A0H3JU78, UniRef:UniRef90_A0A0H3JU78 contig_1 cds 2605473 2605838 - GCA000560365_02580 Genomic island nu Sa alpha2 RefSeq:WP_000910581.1, SO:0001217, UniParc:UPI0000054869, UniRef:UniRef100_Q2FVE3, UniRef:UniRef50_Q2FVE3, UniRef:UniRef90_Q2FVE3 contig_1 cds 2606101 2606820 - GCA000560365_02581 fabG SDR family oxidoreductase COG:COG1028, COG:I, RefSeq:WP_000257478.1, SO:0001217, UniParc:UPI00016024F3, UniRef:UniRef100_A0A0D6GW28, UniRef:UniRef50_P46331, UniRef:UniRef90_A0A0D6GW28 contig_1 cds 2607152 2608690 + GCA000560365_02582 abgT Transporter, putative COG:COG2978, COG:H, KEGG:K12942, RefSeq:WP_000202037.1, SO:0001217, UniParc:UPI00004B5CDE, UniRef:UniRef100_Q2FVE1, UniRef:UniRef50_Q4L8X7, UniRef:UniRef90_Q2FVE1 contig_1 cds 2608802 2609224 - GCA000560365_02583 yciW Carboxymuconolactone decarboxylase-like domain-containing protein COG:COG2128, COG:P, RefSeq:WP_001146763.1, SO:0001217, UniParc:UPI00000CACD7, UniRef:UniRef100_Q2FVE0, UniRef:UniRef50_Q2FVE0, UniRef:UniRef90_Q2FVE0 contig_1 cds 2609676 2610095 - GCA000560365_02584 DUF1433 domain-containing protein RefSeq:WP_000037508.1, SO:0001217, UniParc:UPI000005486D, UniRef:UniRef100_Q2FVD9, UniRef:UniRef50_A0A7U7JRB0, UniRef:UniRef90_Q2FVD9 contig_1 cds 2610113 2610532 - GCA000560365_02585 DUF1433 domain-containing protein RefSeq:WP_000038231.1, SO:0001217, UniParc:UPI000005486E, UniRef:UniRef100_Q2FVD8, UniRef:UniRef50_Q2FVD6, UniRef:UniRef90_Q2FVD8 contig_1 cds 2610799 2611221 - GCA000560365_02586 DUF1433 domain-containing protein RefSeq:WP_001034756.1, SO:0001217, UniParc:UPI00004B5CDF, UniRef:UniRef100_Q2FVD6, UniRef:UniRef50_Q2FVD6, UniRef:UniRef90_Q2FVD6 contig_1 cds 2611472 2612167 - GCA000560365_02587 ydfG putative oxidoreductase SAOUHSC_02778 COG:C, COG:COG4221, EC:1.-.-.-, GO:0016491, RefSeq:WP_000217466.1, SO:0001217, UniParc:UPI0000054870, UniRef:UniRef100_Q2FVD5, UniRef:UniRef50_Q2FVD5, UniRef:UniRef90_Q2FVD5 contig_1 cds 2612456 2612737 + GCA000560365_02588 DUF1413 domain-containing protein RefSeq:WP_000220938.1, SO:0001217, UniParc:UPI00000D78A1, UniRef:UniRef100_Q2FVD4, UniRef:UniRef50_Q2FVD4, UniRef:UniRef90_Q2FVD4 contig_1 cds 2612997 2613188 - GCA000560365_02589 HTH cro/C1-type domain-containing protein RefSeq:WP_001224379.1, SO:0001217, UniParc:UPI00000D788C, UniRef:UniRef100_Q2FVD2, UniRef:UniRef50_S2YA76, UniRef:UniRef90_Q2FVD2 contig_1 ncRNA 2613399 2613473 + GCA000560365_02590 sau-19 Staphylococcus sRNA sau-19 RFAM:RF02386, SO:0000655 contig_1 cds 2613749 2614543 - GCA000560365_02591 putative protein SACOL2493 GO:0005886, RefSeq:WP_031808155.1, SO:0001217, UniParc:UPI00044A06CE, UniRef:UniRef100_UPI00044A06CE, UniRef:UniRef50_Q7A7G4, UniRef:UniRef90_Q2FVD0 contig_1 cds 2615079 2615366 - GCA000560365_02592 hypothetical protein RefSeq:WP_000521958.1, SO:0001217, UniParc:UPI00004B5CE3, UniRef:UniRef100_Q2FVC9, UniRef:UniRef50_Q2FVC9, UniRef:UniRef90_Q2FVC9 contig_1 cds 2615369 2615695 - GCA000560365_02593 Cytosolic protein RefSeq:WP_000495498.1, SO:0001217, UniParc:UPI0000054876, UniRef:UniRef100_Q2FVC8, UniRef:UniRef50_Q2FVC8, UniRef:UniRef90_Q2FVC8 contig_1 cds 2615907 2617019 - GCA000560365_02594 Cytosolic protein SO:0001217, UniParc:UPI0000054878, UniRef:UniRef100_Q2FVC6, UniRef:UniRef50_Q2FVC6, UniRef:UniRef90_Q2FVC6 contig_1 cds 2617016 2617405 - GCA000560365_02595 Tandem-type lipoprotein SO:0001217, UniRef:UniRef50_A0AA94F8T8 contig_1 cds 2617354 2617800 - GCA000560365_02596 Tandem-type lipoprotein SO:0001217, UniRef:UniRef50_A0A0E1XB94 contig_1 cds 2617912 2618688 - GCA000560365_02597 putative lipoprotein SAUSA300_2430 GO:0005886, RefSeq:WP_001549768.1, SO:0001217, UniParc:UPI000005487A, UniRef:UniRef100_Q2FVC4, UniRef:UniRef50_Q7A7G4, UniRef:UniRef90_Q2FVC4 contig_1 cds 2618991 2621852 - GCA000560365_02598 DUF3427 domain-containing protein RefSeq:WP_000088722.1, SO:0001217, UniParc:UPI000005487B, UniRef:UniRef100_Q2FVC3, UniRef:UniRef50_A0A380HJB7, UniRef:UniRef90_Q2FVC3 contig_1 cds 2621854 2622246 - GCA000560365_02599 mutT 8-oxo-dGTP diphosphatase COG:COG0494, COG:V, RefSeq:WP_000755954.1, SO:0001217, UniParc:UPI00003B196D, UniRef:UniRef100_Q2FVC2, UniRef:UniRef50_A0A3A5KZ23, UniRef:UniRef90_A0A3A5KZ23 contig_1 cds 2622534 2624171 + GCA000560365_02600 pgcA Phosphoglucomutase COG:COG1109, COG:G, EC:5.4.2.2, GO:0000287, GO:0004614, GO:0006006, GO:0006166, GO:0008973, GO:0009246, SO:0001217, UniParc:UPI0001E07159, UniRef:UniRef100_A0A133PV72, UniRef:UniRef50_Q2FVC1, UniRef:UniRef90_Q2FVC1 contig_1 cds 2624455 2624721 + GCA000560365_02601 Secreted protein RefSeq:WP_000678764.1, SO:0001217, UniParc:UPI000005487E, UniRef:UniRef100_Q2FVC0, UniRef:UniRef50_A0A2K4AFJ0, UniRef:UniRef90_A0A2K4AFJ0 contig_1 cds 2624865 2625173 + GCA000560365_02602 DUF3784 domain-containing protein RefSeq:WP_000217710.1, SO:0001217, UniParc:UPI000005487F, UniRef:UniRef100_Q2G2B5, UniRef:UniRef50_Q2G2B5, UniRef:UniRef90_Q2G2B5 contig_1 cds 2625281 2625451 - GCA000560365_02603 hypothetical protein RefSeq:WP_000875586.1, SO:0001217, UniParc:UPI0001698E26, UniRef:UniRef100_A0A641A834, UniRef:UniRef50_Q2G2B4, UniRef:UniRef90_Q2G2B4 contig_1 cds 2625495 2626688 - GCA000560365_02604 MFS transporter RefSeq:WP_000966099.1, SO:0001217, UniParc:UPI00004B5CE5, UniRef:UniRef100_Q2G2B3, UniRef:UniRef50_A0A0M2NSQ1, UniRef:UniRef90_Q2G2B3 contig_1 cds 2627072 2627638 - GCA000560365_02605 Surface protein KEGG:K14195, RefSeq:WP_001549770.1, SO:0001217, UniParc:UPI00025F4B82, UniRef:UniRef100_A0A389V7U2, UniRef:UniRef50_A0A389V7U2, UniRef:UniRef90_A0A389V7U2 contig_1 cds 2627808 2628137 + GCA000560365_02606 hypothetical protein SO:0001217, UniParc:UPI00026C21C6, UniRef:UniRef100_A0A380EM44, UniRef:UniRef50_A0A380EM23, UniRef:UniRef90_A0A380EM23 contig_1 cds 2629084 2630418 - GCA000560365_02607 Cell wall anchor protein KEGG:K14195, RefSeq:WP_001549775.1, SO:0001217, UniParc:UPI0000696CDF, UniRef:UniRef100_A0A6B5EVI7, UniRef:UniRef50_A0A7U7F058, UniRef:UniRef90_A0A7U7F058 contig_1 cds 2630724 2631080 - GCA000560365_02608 sarT HTH-type transcriptional regulator SarT BlastRules:WP_000998869, COG:COG1846, COG:K, GO:0003677, GO:0003700, GO:0005737, GO:0006950, RefSeq:WP_000998869.1, SO:0001217, UniParc:UPI00004B5CE6, UniRef:UniRef100_Q2G2B1, UniRef:UniRef50_Q2G2B1, UniRef:UniRef90_Q2G2B1 contig_1 cds 2631407 2632150 + GCA000560365_02609 sarU HTH-type transcriptional regulator SarU BlastRules:WP_000386367, COG:COG1846, COG:K, GO:0003677, GO:0003700, GO:0005737, GO:0006950, RefSeq:WP_000386366.1, SO:0001217, UniParc:UPI0000696CE0, UniRef:UniRef100_A0A1S6DRK0, UniRef:UniRef50_Q2G1T7, UniRef:UniRef90_Q2G1T7 contig_1 cds 2632361 2633227 - GCA000560365_02610 galU UTP--glucose-1-phosphate uridylyltransferase GalU COG:COG1210, COG:M, EC:2.7.7.9, GO:0003983, GO:0006011, GO:0009246, RefSeq:WP_000721336.1, SO:0001217, UniParc:UPI00000CA9A8, UniRef:UniRef100_Q2G1T6, UniRef:UniRef50_Q2G1T6, UniRef:UniRef90_Q2G1T6 contig_1 cds 2633407 2636229 - GCA000560365_02611 fnbB fibronectin-binding protein FnbB BlastRules:WP_001566815, GO:0005576, GO:0007155, RefSeq:WP_000841422.1, SO:0001217, UniParc:UPI00000B7719, UniRef:UniRef100_A0A0H2XKG3, UniRef:UniRef50_P14738, UniRef:UniRef90_A0A0H2XKG3 contig_1 cds 2636911 2639967 - GCA000560365_02612 fnbA Fibronectin-binding protein A GO:0005576, GO:0007155, RefSeq:WP_000794589.1, SO:0001217, UniParc:UPI0000052256, UniRef:UniRef100_Q2FE03, UniRef:UniRef50_P14738, UniRef:UniRef90_P14738 contig_1 cds 2640436 2641794 - GCA000560365_02613 gntT Gluconate permease, putative COG:COG2610, COG:G, RefSeq:WP_000481425.1, SO:0001217, UniParc:UPI000005488A, UniRef:UniRef100_Q2G206, UniRef:UniRef50_O31862, UniRef:UniRef90_Q2G206 contig_1 cds 2641911 2643464 - GCA000560365_02614 gntK gluconokinase COG:COG1070, COG:G, EC:2.7.1.12, GO:0009255, GO:0019521, GO:0046316, KEGG:K25031, RefSeq:WP_000876663.1, SO:0001217, UniParc:UPI000005488B, UniRef:UniRef100_Q2G205, UniRef:UniRef50_A0A1X1FDN6, UniRef:UniRef90_A0A077UL99 contig_1 cds 2643488 2644168 - GCA000560365_02615 gntR FCD domain-containing protein COG:COG1802, COG:K, KEGG:K11476, RefSeq:WP_000990133.1, SO:0001217, UniParc:UPI00000522E1, UniRef:UniRef100_Q2G208, UniRef:UniRef50_A0A239YRW4, UniRef:UniRef90_A0A0U1MT80 contig_1 cds 2644322 2645086 - GCA000560365_02616 soxR HTH merR-type domain-containing protein COG:COG0789, COG:K, RefSeq:WP_031808156.1, SO:0001217, UniParc:UPI00044A494B, UniRef:UniRef100_UPI00044A494B, UniRef:UniRef50_Q2G2L8, UniRef:UniRef90_Q2G2L8 contig_1 cds 2645251 2645943 - GCA000560365_02617 yjbM GTP pyrophosphokinase YwaC COG:COG2357, COG:FT, RefSeq:WP_000289136.1, SO:0001217, UniParc:UPI000005488E, UniRef:UniRef100_Q2G2L7, UniRef:UniRef50_A0A240A5W9, UniRef:UniRef90_A0A7U7JRL0 contig_1 cds 2646174 2646590 - GCA000560365_02618 ydaT DUF2188 domain-containing protein COG:COG4876, COG:S, RefSeq:WP_001117054.1, SO:0001217, UniParc:UPI0000054890, UniRef:UniRef100_Q2G2L6, UniRef:UniRef50_Q2G2L6, UniRef:UniRef90_Q2G2L6 contig_1 cds 2646729 2648552 - GCA000560365_02619 yccC Integral membrane bound transporter domain-containing protein COG:COG1289, COG:S, RefSeq:WP_000586392.1, SO:0001217, UniParc:UPI00015FD77B, UniRef:UniRef100_A0A380ENV1, UniRef:UniRef50_A0A853V3T2, UniRef:UniRef90_A0A0H3JXE4 contig_1 cds 2649030 2650307 - GCA000560365_02620 uhpC Major facilitator superfamily (MFS) profile domain-containing protein COG:COG2271, COG:G, RefSeq:WP_000660709.1, SO:0001217, UniParc:UPI0000054892, UniRef:UniRef100_Q2FVB9, UniRef:UniRef50_Q2FVB9, UniRef:UniRef90_Q2FVB9 contig_1 cds 2650854 2651465 + GCA000560365_02621 uptA Undecaprenyl phosphate transporter A COG:COG0586, COG:M, GO:0005886, GO:0071555, KEGG:K03975, RefSeq:WP_000435044.1, SO:0001217, UniParc:UPI0000054893, UniRef:UniRef100_Q2FVB8, UniRef:UniRef50_Q2FVB8, UniRef:UniRef90_Q2FVB8 contig_1 cds 2651562 2652725 - GCA000560365_02622 Major facilitator superfamily (MFS) profile domain-containing protein RefSeq:WP_000610884.1, SO:0001217, UniParc:UPI0000054894, UniRef:UniRef100_Q2FVB6, UniRef:UniRef50_Q2FVB6, UniRef:UniRef90_Q2FVB6 contig_1 cds 2652718 2653182 - GCA000560365_02623 HTH marR-type domain-containing protein SO:0001217, UniParc:UPI00004B5CEC, UniRef:UniRef100_Q2FVB5, UniRef:UniRef50_Q2FVB5, UniRef:UniRef90_Q2FVB5 contig_1 cds 2653610 2654305 + GCA000560365_02624 rbbA ABC transporter domain-containing protein COG:COG1131, COG:JV, RefSeq:WP_000382904.1, SO:0001217, UniParc:UPI0000054896, UniRef:UniRef100_Q2FVB4, UniRef:UniRef50_Q2FVB4, UniRef:UniRef90_Q2FVB4 contig_1 cds 2654307 2655077 + GCA000560365_02625 Membrane spanning protein, putative RefSeq:WP_000536961.1, SO:0001217, UniParc:UPI0000054897, UniRef:UniRef100_Q2FVB3, UniRef:UniRef50_K9AVH9, UniRef:UniRef90_Q2FVB3 contig_1 cds 2655450 2657414 + GCA000560365_02626 fbp Fructose-1,6-bisphosphatase class 3 COG:COG3855, COG:G, EC:3.1.3.11, GO:0006094, GO:0042132, KEGG:K04041, RefSeq:WP_000192168.1, SO:0001217, UniParc:UPI0000054898, UniRef:UniRef100_Q2FVB2, UniRef:UniRef50_Q2FVB2, UniRef:UniRef90_Q2FVB2 contig_1 ncRNA 2657448 2657537 - GCA000560365_02627 fstAT Fst antitoxin sRNA RFAM:RF01797, SO:0000655 contig_1 sorf 2657562 2657639 + GCA000560365_02628 Secreted protein SO:0001217, UniParc:UPI00000D9FF2, UniRef:UniRef100_Q2FVB1, UniRef:UniRef50_Q2FVB1, UniRef:UniRef90_Q2FVB1 contig_1 cds 2657758 2658837 + GCA000560365_02629 ykvI Branched-chain amino acid transport system carrier protein COG:COG3949, COG:S, RefSeq:WP_001549787.1, SO:0001217, UniParc:UPI0000047407, UniRef:UniRef100_A0A0D6WG35, UniRef:UniRef50_Q2FVB0, UniRef:UniRef90_Q2FVB0 contig_1 cds 2658942 2659535 - GCA000560365_02630 mhqD methylhydroquinone degradation carboxylesterase MhqD COG:COG0400, COG:R, RefSeq:WP_000400032.1, SO:0001217, UniParc:UPI00004B5CED, UniRef:UniRef100_Q2FVA9, UniRef:UniRef50_Q2FVA9, UniRef:UniRef90_Q2FVA9 contig_1 cds 2659557 2660525 - GCA000560365_02631 gloA Dioxygenase COG:COG0346, COG:Q, KEGG:K15975, RefSeq:WP_000609348.1, SO:0001217, UniParc:UPI0000047406, UniRef:UniRef100_Q2FVA8, UniRef:UniRef50_F4BQ31, UniRef:UniRef90_A0A3A5LQ32 contig_1 cds 2660603 2661037 - GCA000560365_02632 marR HTH marR-type domain-containing protein COG:COG1846, COG:K, RefSeq:WP_000376235.1, SO:0001217, UniParc:UPI000005489B, UniRef:UniRef100_Q2FVA7, UniRef:UniRef50_Q2FVA7, UniRef:UniRef90_Q2FVA7 contig_1 cds 2661264 2661548 + GCA000560365_02633 yidJ Acetyltransferase COG:COG2388, COG:R, RefSeq:WP_000067115.1, SO:0001217, UniParc:UPI00004B5CEE, UniRef:UniRef100_Q2FVA6, UniRef:UniRef50_A0A1E9A8Y1, UniRef:UniRef90_A0A7U7JRC7 contig_1 cds 2661719 2662525 + GCA000560365_02634 catE Glyoxalase COG:COG2514, COG:Q, RefSeq:WP_031808157.1, SO:0001217, UniParc:UPI00044CBAB1, UniRef:UniRef100_UPI00044CBAB1, UniRef:UniRef50_A0A6L9GI04, UniRef:UniRef90_A0A0S2JAB5 contig_1 cds 2662645 2663316 - GCA000560365_02635 nfnB Putative NAD(P)H nitroreductase SAB2397c COG:C, COG:COG0778, EC:1.-.-.-, GO:0005829, GO:0046256, GO:0046857, RefSeq:WP_000069101.1, SO:0001217, UniParc:UPI00004B5CEF, UniRef:UniRef100_Q2FVA4, UniRef:UniRef50_Q4A087, UniRef:UniRef90_Q2FVA4 contig_1 cds 2663586 2664578 + GCA000560365_02636 ldhD D-lactate dehydrogenase COG:CHR, COG:COG1052, EC:1.1.1.28, GO:0008720, GO:0051287, RefSeq:WP_000161536.1, SO:0001217, UniParc:UPI00000BC046, UniRef:UniRef100_Q5HD29, UniRef:UniRef50_P63940, UniRef:UniRef90_P63940 contig_1 cds 2664827 2665627 - GCA000560365_02637 cof HAD family hydrolase COG:COG0561, COG:HR, RefSeq:WP_000237518.1, SO:0001217, UniParc:UPI00004B5CF0, UniRef:UniRef100_A0A0E7PWL2, UniRef:UniRef50_Q2FVA2, UniRef:UniRef90_Q2FVA2 contig_1 cds 2665948 2666583 + GCA000560365_02638 rbbA ABC transporter domain-containing protein COG:COG1131, COG:JV, KEGG:K16917, RefSeq:WP_000773921.1, SO:0001217, UniParc:UPI00000548A1, UniRef:UniRef100_Q2FVA1, UniRef:UniRef50_Q2FVA1, UniRef:UniRef90_Q2FVA1 contig_1 cds 2666598 2667320 + GCA000560365_02639 Peptide ABC transporter permease SO:0001217, UniParc:UPI0001698BF1, UniRef:UniRef100_X5EI48, UniRef:UniRef50_Q45592, UniRef:UniRef90_Q2FVA0 contig_1 cds 2667480 2668100 - GCA000560365_02640 srtA class A sortase SrtA BlastRules:WP_000759361, COG:COG3764, COG:M, EC:3.4.22.70, GO:0005886, GO:0006508, GO:0008234, GO:0046872, RefSeq:WP_000759361.1, SO:0001217, UniParc:UPI00000B26CB, UniRef:UniRef100_Q2FV99, UniRef:UniRef50_Q2FV99, UniRef:UniRef90_Q2FV99 contig_1 cds 2668294 2668785 + GCA000560365_02641 mnaT N-acetyltransferase domain-containing protein COG:COG1247, COG:E, EC:2.3.1.-, KEGG:K24217, RefSeq:WP_000621927.1, SO:0001217, UniParc:UPI00000548A7, UniRef:UniRef100_Q2FV98, UniRef:UniRef50_Q2FV98, UniRef:UniRef90_Q2FV98 contig_1 cds 2669223 2669393 - GCA000560365_02642 Mobilization protein RefSeq:WP_001549802.1, SO:0001217, UniParc:UPI00000D9FFB, UniRef:UniRef100_Q2FV97, UniRef:UniRef50_A0A1D4MSI6, UniRef:UniRef90_Q2FV97 contig_1 cds 2669572 2670471 - GCA000560365_02643 sdaAA L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha COG:COG1760, COG:E, EC:4.3.1.17, GO:0003941, GO:0006094, GO:0006565, KEGG:K01752, RefSeq:WP_000460421.1, SO:0001217, UniParc:UPI0000052255, UniRef:UniRef100_Q2FV95, UniRef:UniRef50_A0AAN1D8A6, UniRef:UniRef90_A0A2K4ALL6 contig_1 cds 2670485 2671165 - GCA000560365_02644 sdaAB L-serine ammonia-lyase, iron-sulfur-dependent subunit beta COG:COG1760, COG:E, EC:4.3.1.17, GO:0003941, GO:0006094, GO:0006565, KEGG:K01752, RefSeq:WP_001140234.1, SO:0001217, UniParc:UPI00000548A9, UniRef:UniRef100_Q2FV94, UniRef:UniRef50_A0A0U1E0K5, UniRef:UniRef90_A0A2K4ALQ3 contig_1 cds 2671168 2672211 - GCA000560365_02645 frwC Phosphotransferase system EIIC domain-containing protein COG:COG1299, COG:G, RefSeq:WP_000353634.1, SO:0001217, UniParc:UPI00000548AA, UniRef:UniRef100_Q2FV93, UniRef:UniRef50_Q2FV93, UniRef:UniRef90_Q2FV93 contig_1 cds 2672762 2672965 + GCA000560365_02646 hypothetical protein RefSeq:WP_001177186.1, SO:0001217, UniParc:UPI00000D76CD, UniRef:UniRef100_Q2FV92, UniRef:UniRef50_Q2FV92, UniRef:UniRef90_Q2FV92 contig_1 cds 2673121 2674083 + GCA000560365_02647 rhaT EamA domain-containing protein COG:COG0697, COG:GER, SO:0001217, UniParc:UPI00000548AB, UniRef:UniRef100_A0A0D3QB51, UniRef:UniRef50_Q2FV91, UniRef:UniRef90_Q2FV91 contig_1 cds 2674165 2675133 - GCA000560365_02648 aes Alpha/beta hydrolase COG:COG0657, COG:I, RefSeq:WP_001228162.1, SO:0001217, UniParc:UPI00000548AC, UniRef:UniRef100_Q2FV90, UniRef:UniRef50_A0A3A3AIJ1, UniRef:UniRef90_A0A3A3AIJ1 contig_1 cds 2675266 2675610 - GCA000560365_02649 Thioredoxin domain-containing protein RefSeq:WP_000240662.1, SO:0001217, UniParc:UPI00000D9FFD, UniRef:UniRef100_Q2FV89, UniRef:UniRef50_Q2FV89, UniRef:UniRef90_Q2FV89 contig_1 cds 2675652 2676062 - GCA000560365_02650 fadM Acyl-CoA thioesterase COG:COG0824, COG:I, RefSeq:WP_000206033.1, SO:0001217, UniParc:UPI00000548B0, UniRef:UniRef100_Q2FV88, UniRef:UniRef50_Q2FV88, UniRef:UniRef90_Q2FV88 contig_1 cds 2676442 2678508 - GCA000560365_02651 glcB PTS system glucoside-specific EIICBA component COG:COG2190, COG:G, GO:0005886, GO:0008982, GO:0009401, GO:0016301, GO:0055056, GO:0090563, GO:1904659, RefSeq:WP_000473675.1, SO:0001217, UniParc:UPI00000D9FFE, UniRef:UniRef100_Q2FV87, UniRef:UniRef50_P20166, UniRef:UniRef90_Q2FV87 contig_1 cds 2678809 2680548 - GCA000560365_02652 ilvB pyruvate oxidase COG:COG0028, COG:EH, EC:1.2.3.3, GO:0000287, GO:0030976, KEGG:K00158, RefSeq:WP_001062658.1, SO:0001217, UniParc:UPI00000522A2, UniRef:UniRef100_Q2FV86, UniRef:UniRef50_A0A0D0QSZ0, UniRef:UniRef90_A0A142G9E0 contig_1 cds 2680595 2681284 - GCA000560365_02653 cidB Holin-like protein CidB COG:COG1346, COG:M, GO:0005886, GO:0031640, RefSeq:WP_001001019.1, SO:0001217, UniParc:UPI00000548B3, UniRef:UniRef100_P60639, UniRef:UniRef50_P60639, UniRef:UniRef90_P60639 contig_1 cds 2681277 2681672 - GCA000560365_02654 cidA holin-like murein hydrolase modulator CidA BlastRules:WP_000549734, COG:COG1380, COG:R, GO:0005886, GO:0012501, GO:0019835, GO:0031640, RefSeq:WP_000549734.1, SO:0001217, UniParc:UPI00000548B4, UniRef:UniRef100_P60647, UniRef:UniRef50_P60647, UniRef:UniRef90_P60647 contig_1 cds 2681885 2682748 - GCA000560365_02655 cidR cidABC operon transcriptional activator CidR COG:COG0583, COG:K, SO:0001217, UniParc:UPI0001E0716E, UniRef:UniRef100_Q2FV83, UniRef:UniRef50_Q2FV83, UniRef:UniRef90_Q2FV83 contig_1 cds 2682930 2683148 + GCA000560365_02656 yozE YozE SAM-like domain-containing protein RefSeq:WP_000011687.1, SO:0001217, UniParc:UPI00000D775E, UniRef:UniRef100_Q2FV82, UniRef:UniRef50_Q2FV82, UniRef:UniRef90_Q2FV82 contig_1 ncRNA 2683158 2683210 + GCA000560365_02657 sau-6072 Staphylococcus sRNA sau-6072 RFAM:RF02398, SO:0000655 contig_1 cds 2683537 2683968 + GCA000560365_02658 lysM LysM domain protein COG:COG3942, COG:M, RefSeq:WP_000455861.1, SO:0001217, UniParc:UPI00000548B8, UniRef:UniRef100_Q2FV81, UniRef:UniRef50_Q2FV81, UniRef:UniRef90_Q2FV81 contig_1 cds 2684728 2684985 - GCA000560365_02659 hypothetical protein RefSeq:WP_000402605.1, SO:0001217, UniParc:UPI00004B5CF4, UniRef:UniRef100_Q2FV78, UniRef:UniRef50_Q2FV78, UniRef:UniRef90_Q2FV78 contig_1 cds 2685564 2686841 - GCA000560365_02660 hMG1 hydroxymethylglutaryl-CoA reductase, degradative COG:COG1257, COG:I, EC:1.1.1.88, GO:0004420, GO:0015936, GO:0016616, KEGG:K00054, RefSeq:WP_001180323.1, SO:0001217, UniParc:UPI00000548BC, UniRef:UniRef100_Q2FV77, UniRef:UniRef50_B9DLB2, UniRef:UniRef90_A0A641A7V3 contig_1 cds 2687095 2688261 + GCA000560365_02661 pksG hydroxymethylglutaryl-CoA synthase COG:COG3425, COG:I, EC:2.3.3.10, GO:0004421, KEGG:K01641, RefSeq:WP_000151982.1, SO:0001217, UniParc:UPI00000548BD, UniRef:UniRef100_Q2FV76, UniRef:UniRef50_R3WMN8, UniRef:UniRef90_A0A2S6D8I9 contig_1 cds 2688431 2688952 - GCA000560365_02662 adaB Methylated-DNA--protein-cysteine methyltransferase COG:COG0350, COG:L, RefSeq:WP_000455987.1, SO:0001217, UniParc:UPI00000548BE, UniRef:UniRef100_Q2FV75, UniRef:UniRef50_A0A3A5LJI7, UniRef:UniRef90_A0A3A5LJI7 contig_1 cds 2689361 2691466 + GCA000560365_02663 clpL ATP-dependent Clp protease ATP-binding subunit ClpL BlastRules:WP_001058981, COG:COG0542, COG:O, GO:0005524, GO:0005737, GO:0016887, GO:0034605, KEGG:K04086, RefSeq:WP_001058981.1, SO:0001217, UniParc:UPI00000548BF, UniRef:UniRef100_Q2FV74, UniRef:UniRef50_Q2FV74, UniRef:UniRef90_Q2FV74 contig_1 cds 2691535 2691705 - GCA000560365_02664 FeoB-associated Cys-rich membrane protein RefSeq:WP_000111118.1, SO:0001217, UniParc:UPI00000DA004, UniRef:UniRef100_Q2FV73, UniRef:UniRef50_Q2FV73, UniRef:UniRef90_Q2FV73 contig_1 cds 2691718 2693712 - GCA000560365_02665 feoB ferrous iron transport protein B COG:COG0370, COG:P, GO:0005525, GO:0005886, GO:0006826, GO:0015093, GO:0016020, RefSeq:WP_000432907.1, SO:0001217, UniParc:UPI00004B5CF5, UniRef:UniRef100_Q5HD01, UniRef:UniRef50_Q99R86, UniRef:UniRef90_Q99R86 contig_1 cds 2693724 2693951 - GCA000560365_02666 feoA Ferrous iron transporter FeoA-like domain-containing protein COG:COG1918, COG:P, RefSeq:WP_000932073.1, SO:0001217, UniParc:UPI00000548C1, UniRef:UniRef100_Q2FV71, UniRef:UniRef50_Q2FV71, UniRef:UniRef90_Q2FV71 contig_1 cds 2694167 2696656 - GCA000560365_02667 farE fatty acid efflux MMPL transporter FarE BlastRules:WP_001051413, COG:COG2409, COG:R, RefSeq:WP_001051428.1, SO:0001217, UniParc:UPI0001D0CD53, UniRef:UniRef100_A0A6B0DA92, UniRef:UniRef50_A0A2A4GX54, UniRef:UniRef90_A0A122EMC8 contig_1 cds 2696801 2697349 + GCA000560365_02668 farR fatty acid efflux pump transcriptional regulator FarR BlastRules:WP_000665241, COG:COG1309, COG:K, RefSeq:WP_000665238.1, SO:0001217, UniParc:UPI00000548C4, UniRef:UniRef100_Q2FV69, UniRef:UniRef50_Q2FV69, UniRef:UniRef90_Q2FV69 contig_1 cds 2697705 2699249 - GCA000560365_02669 pruA L-glutamate gamma-semialdehyde dehydrogenase COG:COG1012, COG:I, EC:1.2.1.88, GO:0003842, GO:0006537, GO:0006562, GO:0009898, GO:0010133, KEGG:K00294, RefSeq:WP_000259692.1, SO:0001217, UniParc:UPI00000CA9A3, UniRef:UniRef100_Q2FV67, UniRef:UniRef50_P94391, UniRef:UniRef90_Q2FV67 contig_1 cds 2699439 2700038 - GCA000560365_02670 wbbJ Putative acetyltransferase SAS2441 COG:COG0110, COG:R, EC:2.3.1.-, GO:0008870, KEGG:K00661, RefSeq:WP_000136500.1, SO:0001217, UniParc:UPI00000DA009, UniRef:UniRef100_Q5HCZ5, UniRef:UniRef50_Q5HCZ5, UniRef:UniRef90_Q5HCZ5 contig_1 cds 2700277 2700468 + GCA000560365_02671 cwrA cell wall inhibition responsive protein CwrA BlastRules:WP_001221404, RefSeq:WP_001221404.1, SO:0001217, UniParc:UPI00000CAA05, UniRef:UniRef100_Q2FV65, UniRef:UniRef50_A0AAE3D5F7, UniRef:UniRef90_A0AAE3D5F7 contig_1 cds 2700708 2703116 + GCA000560365_02672 copZ copper chaperone CopZ COG:COG2217, COG:P, EC:7.2.2.8, GO:0005507, GO:0005524, GO:0005886, GO:0016887, GO:0043682, GO:0046872, GO:0055070, GO:0140581, RefSeq:WP_000024128.1, SO:0001217, UniParc:UPI0000696CE7, UniRef:UniRef100_Q2FDV0, UniRef:UniRef50_Q2FV64, UniRef:UniRef90_Q2FV64 contig_1 cds 2703545 2703751 + GCA000560365_02673 copZ copper chaperone CopZ COG:COG2608, COG:P, GO:0005507, GO:0005737, RefSeq:WP_000076661.1, SO:0001217, UniParc:UPI00000D7866, UniRef:UniRef100_Q2FV63, UniRef:UniRef50_Q2FV63, UniRef:UniRef90_Q2FV63 contig_1 cds 2703841 2704839 - GCA000560365_02674 ldhA D-lactate dehydrogenase COG:CHR, COG:COG1052, RefSeq:WP_000161358.1, SO:0001217, UniParc:UPI00004B5CF9, UniRef:UniRef100_Q2FV62, UniRef:UniRef50_A0A658WNB1, UniRef:UniRef90_A0A658WNB1 contig_1 cds 2704862 2706016 - GCA000560365_02675 aspB Aminotransferase COG:COG0436, COG:E, RefSeq:WP_000625059.1, SO:0001217, UniParc:UPI00004B5CFA, UniRef:UniRef100_Q2FV61, UniRef:UniRef50_A0A2I7YAX0, UniRef:UniRef90_A0A2I7YAX0 contig_1 cds 2706443 2707951 - GCA000560365_02676 crtN 4,4'-diapophytoene desaturase (4,4'-diaponeurosporene-forming) COG:COG1233, COG:Q, EC:1.3.8.-, GO:0016117, GO:0102223, RefSeq:WP_000686168.1, SO:0001217, UniParc:UPI00000548CF, UniRef:UniRef100_Q2FV60, UniRef:UniRef50_Q2FV60, UniRef:UniRef90_Q2FV60 contig_1 cds 2707963 2708826 - GCA000560365_02677 crtM 4,4'-diapophytoene synthase COG:COG1562, COG:I, EC:2.5.1.96, GO:0004311, GO:0016117, GO:0046872, GO:0051996, RefSeq:WP_031808158.1, SO:0001217, UniParc:UPI00044DF68C, UniRef:UniRef100_UPI00044DF68C, UniRef:UniRef50_Q2FV59, UniRef:UniRef90_Q2FV59 contig_1 cds 2708863 2709990 - GCA000560365_02678 crtQ 4,4'-diaponeurosporenoate glycosyltransferase BlastRules:WP_000871731, COG:COG0463, COG:M, EC:2.4.1.-, GO:0005886, GO:0016117, GO:0016757, KEGG:K10211, RefSeq:WP_000871731.1, SO:0001217, UniParc:UPI00000DA010, UniRef:UniRef100_Q2FV58, UniRef:UniRef50_Q2FV58, UniRef:UniRef90_Q2FV58 contig_1 cds 2709996 2711489 - GCA000560365_02679 crtP 4,4'-diaponeurosporene oxygenase COG:COG1233, COG:Q, EC:1.14.99.-, GO:0016117, GO:0016491, KEGG:K10210, RefSeq:WP_000160456.1, SO:0001217, UniParc:UPI00004B5CFD, UniRef:UniRef100_Q2FV57, UniRef:UniRef50_Q4VKU9, UniRef:UniRef90_Q2FV57 contig_1 cds 2711482 2711979 - GCA000560365_02680 crtO glycosyl-4,4'-diaponeurosporenoate acyltransferase BlastRules:WP_000855549, EC:2.3.1.-, GO:0005886, GO:0016117, GO:0016746, KEGG:K10212, SO:0001217, UniParc:UPI00000548D3, UniRef:UniRef100_Q2FV56, UniRef:UniRef50_Q53588, UniRef:UniRef90_Q53588 contig_1 cds 2712145 2712912 - GCA000560365_02681 ssaA Staphylococcal secretory antigen SsaA COG:COG3942, COG:M, GO:0005576, RefSeq:WP_000725225.1, SO:0001217, UniParc:UPI00000D7806, UniRef:UniRef100_Q2FV55, UniRef:UniRef50_Q2G2J2, UniRef:UniRef90_Q2FV55 contig_1 cds 2713273 2715084 - GCA000560365_02682 oatA O-acetyltransferase OatA COG:COG1835, COG:M, EC:2.3.1.-, GO:0005886, GO:0009103, GO:0016747, RefSeq:WP_000379821.1, SO:0001217, UniParc:UPI00000548D5, UniRef:UniRef100_Q2FV54, UniRef:UniRef50_Q2FV54, UniRef:UniRef90_Q2FV54 contig_1 cds 2715595 2715837 - GCA000560365_02683 GNAT family N-acetyltransferase SO:0001217, UniRef:UniRef50_UPI0012B014AC, UniRef:UniRef90_UPI0012B014AC contig_1 cds 2715807 2716082 - GCA000560365_02684 (pseudo) Acetyltransferase, GNAT family SO:0001217, UniRef:UniRef50_Q2FV53, UniRef:UniRef90_A0A380DPU9 contig_1 cds 2716358 2717059 - GCA000560365_02685 isaA lytic transglycosylase IsaA BlastRules:WP_000751267, EC:3.2.-.-, GO:0005576, GO:0016798, RefSeq:WP_000751267.1, SO:0001217, UniParc:UPI0000052252, UniRef:UniRef100_Q2FV52, UniRef:UniRef50_Q2FV52, UniRef:UniRef90_Q2FV52 contig_1 cds 2717667 2718722 - GCA000560365_02686 pfoR Phosphotransferase system EIIC domain-containing protein COG:COG3641, COG:T, KEGG:K07035, RefSeq:WP_000200684.1, SO:0001217, UniParc:UPI00000CAA88, UniRef:UniRef100_Q2FV51, UniRef:UniRef50_Q2FV51, UniRef:UniRef90_Q2FV51 contig_1 cds 2719114 2719701 + GCA000560365_02687 acrR HTH tetR-type domain-containing protein COG:COG1309, COG:K, SO:0001217, UniParc:UPI00006E4543, UniRef:UniRef100_A0A0H2WZJ2, UniRef:UniRef50_Q2FV48, UniRef:UniRef90_Q2FV48 contig_1 cds 2720079 2720399 + GCA000560365_02688 (pseudo) hypothetical protein SO:0001217, UniParc:UPI00000CAE03, UniRef:UniRef100_A0A1Q8R4W5, UniRef:UniRef50_A0A0H3K4R4, UniRef:UniRef50_Q2FV47, UniRef:UniRef90_A0A1Q8R4W5, UniRef:UniRef90_Q2FV47 contig_1 cds 2720619 2720849 + GCA000560365_02689 ynzC UPF0291 protein SAR2654 COG:COG4224, COG:S, GO:0005737, RefSeq:WP_000697134.1, SO:0001217, UniParc:UPI00000548DD, UniRef:UniRef100_P60077, UniRef:UniRef50_P60077, UniRef:UniRef90_P60077 contig_1 cds 2720999 2721376 - GCA000560365_02690 VOC domain-containing protein RefSeq:WP_000616227.1, SO:0001217, UniParc:UPI00000DA015, UniRef:UniRef100_Q2FV45, UniRef:UniRef50_Q2FV45, UniRef:UniRef90_Q2FV45 contig_1 cds 2721393 2722214 - GCA000560365_02691 ybjT NAD dependent epimerase/dehydratase family protein COG:COG0702, COG:R, RefSeq:WP_000651837.1, SO:0001217, UniParc:UPI00000548DF, UniRef:UniRef100_Q2FV44, UniRef:UniRef50_A0A380FXE5, UniRef:UniRef90_A0A2S6D292 contig_1 cds 2722234 2722533 - GCA000560365_02692 DUF2316 domain-containing protein COG:COG4367, COG:S, RefSeq:WP_000055846.1, SO:0001217, UniParc:UPI00004B5D01, UniRef:UniRef100_Q2FV43, UniRef:UniRef50_Q2FV43, UniRef:UniRef90_Q2FV43 contig_1 cds 2722664 2723221 + GCA000560365_02693 acrR HTH-type transcriptional regulator SACOL2593 COG:COG1309, COG:K, GO:0003677, RefSeq:WP_001224188.1, SO:0001217, UniParc:UPI00000548E2, UniRef:UniRef100_Q2FV42, UniRef:UniRef50_Q2FV42, UniRef:UniRef90_Q2FV42 contig_1 cds 2723214 2723918 + GCA000560365_02694 fabG KR domain-containing protein COG:COG1028, COG:I, RefSeq:WP_000161829.1, SO:0001217, UniParc:UPI00000D7815, UniRef:UniRef100_Q2FV41, UniRef:UniRef50_A0A2K4AHE4, UniRef:UniRef90_A0A2K4AHE4 contig_1 cds 2724016 2725026 + GCA000560365_02695 ligW Amidohydrolase-related domain-containing protein COG:COG2159, COG:G, RefSeq:WP_000836419.1, SO:0001217, UniParc:UPI0000696CE9, UniRef:UniRef100_A0A0D6HPN7, UniRef:UniRef50_Q2FV40, UniRef:UniRef90_Q2FV40 contig_1 cds 2725046 2725876 + GCA000560365_02696 menH putative hydrolase SA2367 COG:COG0596, COG:HR, EC:3.-.-.-, GO:0016020, GO:0016787, RefSeq:WP_000448901.1, SO:0001217, UniParc:UPI0000696CEA, UniRef:UniRef100_Q2FDS6, UniRef:UniRef50_Q2FDS6, UniRef:UniRef90_Q2FDS6 contig_1 cds 2726023 2726913 - GCA000560365_02697 yejR GTP-binding protein COG:COG0523, COG:R, RefSeq:WP_000706519.1, SO:0001217, UniParc:UPI00000548E6, UniRef:UniRef100_Q2FV38, UniRef:UniRef50_L7STG1, UniRef:UniRef90_Q2FV38 contig_1 cds 2727011 2728351 - GCA000560365_02698 feoB Ferrous iron transport protein B COG:COG0370, COG:P, RefSeq:WP_000895195.1, SO:0001217, UniParc:UPI00000DA01A, UniRef:UniRef100_A0A2C9TPH8, UniRef:UniRef50_B9DL78, UniRef:UniRef90_A0A077UMB4 contig_1 cds 2728345 2729451 - GCA000560365_02699 trxB Putative flavoprotein monooxygenase COG:COG0492, COG:O, EC:1.-.-.-, GO:0004497, GO:0050660, RefSeq:WP_001163751.1, SO:0001217, UniParc:UPI00000548E9, UniRef:UniRef100_Q2FV35, UniRef:UniRef50_Q99R54, UniRef:UniRef90_Q99R54 contig_1 cds 2729785 2730081 - GCA000560365_02700 DUF4176 domain-containing protein COG:COG4495, COG:S, RefSeq:WP_000447710.1, SO:0001217, UniParc:UPI00000548EA, UniRef:UniRef100_Q2FV34, UniRef:UniRef50_Q2FV34, UniRef:UniRef90_Q2FV34 contig_1 cds 2730069 2730440 - GCA000560365_02701 hypothetical protein SO:0001217, UniParc:UPI00000548EC, UniRef:UniRef100_A0A133Q112, UniRef:UniRef50_A0A6A9GUL6, UniRef:UniRef90_A0A6A9GUL6 contig_1 cds 2730452 2730730 - GCA000560365_02702 TIGR04197 family type VII secretion effector RefSeq:WP_000987949.1, SO:0001217, UniParc:UPI00000548ED, UniRef:UniRef100_Q2FV32, UniRef:UniRef50_Q2FV32, UniRef:UniRef90_Q2FV32 contig_1 cds 2731072 2731938 - GCA000560365_02703 fN3K putative ketoamine kinase SAOUHSC_02908 COG:COG3001, COG:G, EC:2.7.1.-, GO:0005524, GO:0016301, GO:0016773, GO:0102193, RefSeq:WP_001005511.1, SO:0001217, UniParc:UPI0000696CEB, UniRef:UniRef100_Q2FV31, UniRef:UniRef50_Q2FV31, UniRef:UniRef90_Q2FV31 contig_1 cds 2732156 2733220 + GCA000560365_02704 pyrD quinone-dependent dihydroorotate dehydrogenase COG:COG0167, COG:F, EC:1.3.5.2, RefSeq:WP_000277415.1, SO:0001217, UniParc:UPI00000548EF, UniRef:UniRef100_Q2FV30, UniRef:UniRef50_Q2FV30, UniRef:UniRef90_Q2FV30 contig_1 cds 2733375 2733650 + GCA000560365_02705 Transmembrane protein RefSeq:WP_000159837.1, SO:0001217, UniParc:UPI00000548F0, UniRef:UniRef100_Q2FV29, UniRef:UniRef50_A0A654C2I8, UniRef:UniRef90_Q2FV29 contig_1 cds 2733836 2734558 - GCA000560365_02706 queH Epoxyqueuosine reductase QueH COG:COG1636, COG:J, EC:1.17.99.6, GO:0006400, GO:0008616, GO:0046872, GO:0051539, GO:0052693, KEGG:K09765, RefSeq:WP_000606210.1, SO:0001217, UniParc:UPI00000548F1, UniRef:UniRef100_A0A0H3JUG6, UniRef:UniRef50_Q9A1K3, UniRef:UniRef90_A0A0H3JUG6 contig_1 cds 2734912 2735361 + GCA000560365_02707 phnB PhnB-like domain-containing protein COG:C, COG:COG2764, RefSeq:WP_000125708.1, SO:0001217, UniParc:UPI00004B5D08, UniRef:UniRef100_Q2FV27, UniRef:UniRef50_Q2FV27, UniRef:UniRef90_Q2FV27 contig_1 cds 2735442 2736029 - GCA000560365_02708 acrR HTH tetR-type domain-containing protein COG:COG1309, COG:K, RefSeq:WP_000151112.1, SO:0001217, UniParc:UPI00000DA020, UniRef:UniRef100_Q2FV26, UniRef:UniRef50_Q2FV26, UniRef:UniRef90_Q2FV26 contig_1 cds 2736162 2737844 + GCA000560365_02709 Xaa-Pro dipeptidyl-peptidase C-terminal domain-containing protein COG:COG2936, COG:R, KEGG:K06978, RefSeq:WP_001071591.1, SO:0001217, UniParc:UPI0000696CEC, UniRef:UniRef100_Q2FV24, UniRef:UniRef50_A0A380G5J2, UniRef:UniRef90_Q2FV24 contig_1 cds 2737973 2738356 - GCA000560365_02710 panD aspartate 1-decarboxylase COG:COG0853, COG:H, EC:4.1.1.11, GO:0004068, GO:0005829, GO:0006523, GO:0015940, KEGG:K01579, RefSeq:WP_000621532.1, SO:0001217, UniParc:UPI00001312C4, UniRef:UniRef100_Q2FV23, UniRef:UniRef50_Q2FV23, UniRef:UniRef90_Q2FV23 contig_1 cds 2738358 2739209 - GCA000560365_02711 panC pantoate--beta-alanine ligase COG:COG0414, COG:H, EC:6.3.2.1, GO:0004592, GO:0005524, GO:0005829, GO:0015940, KEGG:K01918, RefSeq:WP_000163735.1, SO:0001217, UniParc:UPI00004B5D0A, UniRef:UniRef100_Q2FDR1, UniRef:UniRef50_Q2FV22, UniRef:UniRef90_Q2FV22 contig_1 cds 2739202 2740020 - GCA000560365_02712 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase COG:COG0413, COG:H, EC:2.1.2.11, GO:0000287, GO:0003864, GO:0005737, GO:0015940, KEGG:K00606, RefSeq:WP_000860047.1, SO:0001217, UniParc:UPI0000131282, UniRef:UniRef100_Q2FV21, UniRef:UniRef50_Q2FV21, UniRef:UniRef90_Q2FV21 contig_1 cds 2740093 2740953 + GCA000560365_02713 panE oxidoreductase COG:COG1893, COG:H, RefSeq:WP_000953568.1, SO:0001217, UniParc:UPI00004B5D0C, UniRef:UniRef100_A0A0D6GTP0, UniRef:UniRef50_A0A0J9X283, UniRef:UniRef90_A0A0J9X283 contig_1 cds 2741039 2741743 - GCA000560365_02714 budA acetolactate decarboxylase COG:COG3527, COG:Q, EC:4.1.1.5, GO:0045151, GO:0047605, KEGG:K01575, RefSeq:WP_000186117.1, SO:0001217, UniParc:UPI00000548FA, UniRef:UniRef100_Q2FV19, UniRef:UniRef50_A0A641A785, UniRef:UniRef90_A0A0U1MVR1 contig_1 cds 2742021 2742980 - GCA000560365_02715 ldh2 L-lactate dehydrogenase COG:C, COG:COG0039, EC:1.1.1.27, GO:0004459, GO:0005737, GO:0006089, GO:0006096, KEGG:K00016, RefSeq:WP_000846637.1, SO:0001217, UniParc:UPI00000548FB, UniRef:UniRef100_Q2G1Y5, UniRef:UniRef50_P00344, UniRef:UniRef90_Q2G1Y5 contig_1 cds 2743667 2745115 + GCA000560365_02716 potE Amino acid permease COG:COG0531, COG:E, RefSeq:WP_000534425.1, SO:0001217, UniParc:UPI00000522E2, UniRef:UniRef100_A0A0D6WF60, UniRef:UniRef50_A2RHI9, UniRef:UniRef90_Q2G1Y2 contig_1 cds 2745196 2746533 - GCA000560365_02717 argD aspartate aminotransferase family protein COG:COG0160, COG:E, GO:0008483, RefSeq:WP_031808159.1, SO:0001217, UniParc:UPI0004454E77, UniRef:UniRef100_UPI0004454E77, UniRef:UniRef50_Q2G1Y4, UniRef:UniRef90_Q2G1Y4 contig_1 cds 2746791 2747207 + GCA000560365_02718 hypothetical protein RefSeq:WP_001237629.1, SO:0001217, UniParc:UPI00000CAB0D, UniRef:UniRef100_Q2FV18, UniRef:UniRef50_Q2FV18, UniRef:UniRef90_Q2FV18 contig_1 cds 2747330 2748220 + GCA000560365_02719 fda fructose bisphosphate aldolase EC:4.1.2.13, GO:0004332, GO:0006096, KEGG:K01623, RefSeq:WP_001031413.1, SO:0001217, UniParc:UPI00004B5D0F, UniRef:UniRef100_Q2FV17, UniRef:UniRef50_Q8CMY5, UniRef:UniRef90_Q6GDJ7 contig_1 cds 2748413 2749909 - GCA000560365_02720 lqo L-lactate dehydrogenase (quinone) COG:COG0579, COG:G, EC:1.1.5.-, EC:1.1.5.4, GO:0006099, GO:0008924, GO:0047545, KEGG:K00116, RefSeq:WP_001130051.1, SO:0001217, UniParc:UPI000012F4C1, UniRef:UniRef100_Q5HCU5, UniRef:UniRef50_O69282, UniRef:UniRef90_Q5HCU5 contig_1 cds 2750594 2752213 - GCA000560365_02721 mbcS acyl-CoA synthetase MbcS COG:COG0365, COG:I, SO:0001217, UniParc:UPI0000054904, UniRef:UniRef100_A0A380EMG2, UniRef:UniRef50_C0SPB0, UniRef:UniRef90_A0A2K4AH92 contig_1 cds 2752386 2752829 - GCA000560365_02722 Signal transduction protein TRAP RefSeq:WP_000708242.1, SO:0001217, UniParc:UPI00004B5D11, UniRef:UniRef100_Q2FV13, UniRef:UniRef50_A0A2T4SS92, UniRef:UniRef90_A0A0U1MTU5 contig_1 cds 2753110 2753322 - GCA000560365_02723 yozE YozE SAM-like domain-containing protein RefSeq:WP_000011688.1, SO:0001217, UniParc:UPI0000054906, UniRef:UniRef100_Q2FV12, UniRef:UniRef50_Q2FV12, UniRef:UniRef90_Q2FV12 contig_1 cds 2753600 2755309 - GCA000560365_02724 betA choline dehydrogenase COG:COG2303, COG:IR, EC:1.1.99.1, GO:0008802, GO:0008812, GO:0016020, GO:0019285, GO:0050660, KEGG:K00108, RefSeq:WP_000066521.1, SO:0001217, UniParc:UPI00000CAC6B, UniRef:UniRef100_Q2FV11, UniRef:UniRef50_Q9X2M2, UniRef:UniRef90_Q8NUM0 contig_1 cds 2755570 2757060 - GCA000560365_02725 betB betaine-aldehyde dehydrogenase COG:COG1012, COG:I, EC:1.2.1.8, GO:0008802, GO:0019285, GO:0046872, RefSeq:WP_000421701.1, SO:0001217, UniParc:UPI0000054908, UniRef:UniRef100_Q2FV10, UniRef:UniRef50_P71016, UniRef:UniRef90_A0A114JEL6 contig_1 cds 2757313 2757876 + GCA000560365_02726 cudC choline uptake/conversion transcriptional regulator CudC COG:COG1510, COG:K, RefSeq:WP_000198602.1, SO:0001217, UniParc:UPI0000696CEF, UniRef:UniRef100_A0A5A8VR20, UniRef:UniRef50_A0A653VN80, UniRef:UniRef90_A0A7U7PWT0 contig_1 cds 2758064 2758750 - GCA000560365_02727 Metallo-beta-lactamase domain-containing protein RefSeq:WP_000184398.1, SO:0001217, UniParc:UPI000005490D, UniRef:UniRef100_Q2FV07, UniRef:UniRef50_Q2FV07, UniRef:UniRef90_Q2FV07 contig_1 cds 2759014 2760636 - GCA000560365_02728 betT BCCT family transporter COG:COG1292, COG:M, RefSeq:WP_000711870.1, SO:0001217, UniParc:UPI00000D7878, UniRef:UniRef100_Q2FV06, UniRef:UniRef50_B9DJU7, UniRef:UniRef90_A0A2K4AH89 contig_1 cds 2761155 2761691 - GCA000560365_02729 nrdG anaerobic ribonucleoside-triphosphate reductase activating protein COG:COG0602, COG:H, GO:0043365, GO:0051539, RefSeq:WP_000601724.1, SO:0001217, UniParc:UPI0000054911, UniRef:UniRef100_Q2FV03, UniRef:UniRef50_Q5HL05, UniRef:UniRef90_W8TQE8 contig_1 cds 2761688 2763538 - GCA000560365_02730 nrdD anaerobic ribonucleoside-triphosphate reductase COG:COG1328, COG:F, EC:1.1.98.6, EC:1.17.4.2, GO:0006260, GO:0008998, KEGG:K21636, RefSeq:WP_001071717.1, SO:0001217, UniParc:UPI0000054912, UniRef:UniRef100_Q2FV02, UniRef:UniRef50_A0A3M8TCM7, UniRef:UniRef90_A0A6B1RSJ5 contig_1 cds 2763785 2765155 - GCA000560365_02731 citM Citrate transporter COG:C, COG:COG2851, RefSeq:WP_001083499.1, SO:0001217, UniParc:UPI00000522E3, UniRef:UniRef100_Q2FV01, UniRef:UniRef50_U7MQB7, UniRef:UniRef90_A0A2K4AHA3 contig_1 cds 2765648 2766253 - GCA000560365_02732 cysG2 NAD(P)-binding protein COG:COG1648, COG:H, RefSeq:WP_001057051.1, SO:0001217, UniParc:UPI00004B5D12, UniRef:UniRef100_Q2FUZ9, UniRef:UniRef50_A0A380FX36, UniRef:UniRef90_A0A2S6D249 contig_1 cds 2766316 2768196 - GCA000560365_02733 cysJ assimilatory sulfite reductase (NADPH) flavoprotein subunit COG:COG0369, COG:FP, EC:1.8.1.2, GO:0004783, GO:0006790, GO:0009337, GO:0010181, GO:0019344, GO:0050660, RefSeq:WP_031783792.1, SO:0001217, UniParc:UPI0004511DA5, UniRef:UniRef100_UPI0004511DA5, UniRef:UniRef50_A0A380BWQ0, UniRef:UniRef90_Q2FUZ8 contig_1 cds 2768591 2769088 - GCA000560365_02734 btuE Glutathione peroxidase COG:COG0386, COG:VI, EC:1.11.1.9, KEGG:K00432, RefSeq:WP_001065268.1, SO:0001217, UniParc:UPI0000054918, UniRef:UniRef100_Q2FUZ6, UniRef:UniRef50_Q5HKZ3, UniRef:UniRef90_A0A7U7JRL2 contig_1 cds 2770512 2772512 - GCA000560365_02735 Similar to ABC transporter (ATP-binding protein) KEGG:K19084, RefSeq:WP_000776751.1, SO:0001217, UniParc:UPI000005491B, UniRef:UniRef100_A0A0D6WF85, UniRef:UniRef50_A0A7U7F0H2, UniRef:UniRef90_A0A7U7F0H2 contig_1 cds 2772509 2773264 - GCA000560365_02736 lolD ABC transporter ATP-binding protein COG:COG1136, COG:M, RefSeq:WP_000923760.1, SO:0001217, UniParc:UPI00000D782D, UniRef:UniRef100_Q2FUZ1, UniRef:UniRef50_A0A2S6D259, UniRef:UniRef90_A0A2S6D259 contig_1 cds 2773372 2774259 - GCA000560365_02737 nsaS nisin susceptibility-associated two-component system sensor histidine kinase NsaS BlastRules:WP_000143419, COG:COG0642, COG:T, EC:2.7.13.3, KEGG:K19081, RefSeq:WP_000143419.1, SO:0001217, UniParc:UPI00004B5D16, UniRef:UniRef100_Q2FUZ0, UniRef:UniRef50_A0A389PV50, UniRef:UniRef90_A0A389PV50 contig_1 cds 2774270 2774935 - GCA000560365_02738 nsaR nisin susceptibility-associated two-component system response regulator NsaR BlastRules:WP_000697886, COG:COG0745, COG:TK, RefSeq:WP_000697886.1, SO:0001217, UniParc:UPI000005491E, UniRef:UniRef100_Q2FUY9, UniRef:UniRef50_A0A371ILZ4, UniRef:UniRef90_A0A5F0HLH2 contig_1 cds 2774961 2775161 - GCA000560365_02739 hypothetical protein RefSeq:WP_000604728.1, SO:0001217, UniParc:UPI000005491F, UniRef:UniRef100_Q2FUY8, UniRef:UniRef50_Q2FUY8, UniRef:UniRef90_Q2FUY8 contig_1 cds 2775359 2776783 + GCA000560365_02740 phoA Alkaline phosphatase 3 COG:COG1785, COG:PR, EC:3.1.3.1, KEGG:K01077, RefSeq:WP_000953744.1, SO:0001217, UniParc:UPI0000054920, UniRef:UniRef100_Q2FUY6, UniRef:UniRef50_A0A0U1MVV2, UniRef:UniRef90_A0A0U1MVV2 contig_1 ncRNA 2776142 2776245 - GCA000560365_02741 sau-13 Staphylococcus sRNA sau-13 RFAM:RF02385, SO:0000655 contig_1 cds 2776843 2776947 - GCA000560365_02742 SE2200 family small protein SO:0001217, UniParc:UPI0000054923, UniRef:UniRef100_Q8NUL1, UniRef:UniRef50_P60876, UniRef:UniRef90_P60876 contig_1 cds 2777066 2777521 - GCA000560365_02743 marR HTH marR-type domain-containing protein COG:COG1846, COG:K, RefSeq:WP_000106185.1, SO:0001217, UniParc:UPI0000054925, UniRef:UniRef100_Q2FUY4, UniRef:UniRef50_Q2FUY4, UniRef:UniRef90_Q2FUY4 contig_1 cds 2777766 2778527 - GCA000560365_02744 frmB S-formylglutathione hydrolase COG:COG0627, COG:V, RefSeq:WP_000323455.1, SO:0001217, UniParc:UPI0000054926, UniRef:UniRef100_Q2FUY3, UniRef:UniRef50_Q2FUY3, UniRef:UniRef90_Q2FUY3 contig_1 cds 2778643 2781090 - GCA000560365_02745 clfB MSCRAMM family adhesin clumping factor ClfB GO:0007155, RefSeq:WP_031808160.1, SO:0001217, UniParc:UPI00044CDD1B, UniRef:UniRef100_UPI00044CDD1B, UniRef:UniRef50_UPI00044CDD1B, UniRef:UniRef90_UPI00044CDD1B contig_1 cds 2781440 2782144 - GCA000560365_02746 arcR HTH-type transcriptional regulator ArcR COG:COG0664, COG:T, GO:0003677, GO:0005737, GO:0030552, KEGG:K21828, RefSeq:WP_000138214.1, SO:0001217, UniParc:UPI0000054928, UniRef:UniRef100_Q2FUY1, UniRef:UniRef50_Q2FUY1, UniRef:UniRef90_Q2FUY1 contig_1 cds 2782243 2783184 - GCA000560365_02747 arcC carbamate kinase COG:COG0549, COG:E, EC:2.7.2.2, GO:0005524, GO:0005829, GO:0006520, GO:0008804, GO:0019546, RefSeq:WP_000660034.1, SO:0001217, UniParc:UPI00001A9C89, UniRef:UniRef100_Q7X2S2, UniRef:UniRef50_P0A2X7, UniRef:UniRef90_P63555 contig_1 cds 2783201 2784631 - GCA000560365_02748 arcD arginine-ornithine antiporter COG:COG0531, COG:E, GO:0005886, GO:0006527, GO:0043858, GO:1903826, KEGG:K03758, RefSeq:WP_001005842.1, SO:0001217, UniParc:UPI00001A9C88, UniRef:UniRef100_Q2FUX9, UniRef:UniRef50_A0A0Y9RFY3, UniRef:UniRef90_A0A0Y9RFY3 contig_1 cds 2784722 2785732 - GCA000560365_02749 argF ornithine carbamoyltransferase COG:COG0078, COG:E, EC:2.1.3.3, GO:0004585, GO:0005737, GO:0006526, GO:0016597, GO:0019240, GO:0019547, GO:0042450, KEGG:K00611, RefSeq:WP_000136166.1, SO:0001217, UniParc:UPI00000DA038, UniRef:UniRef100_Q5HCR3, UniRef:UniRef50_P08308, UniRef:UniRef90_P65601 contig_1 cds 2785765 2787000 - GCA000560365_02750 arcA arginine deiminase COG:COG2235, COG:E, EC:3.5.3.6, GO:0005737, GO:0016990, GO:0019546, GO:0019547, RefSeq:WP_000129411.1, SO:0001217, UniParc:UPI000005492C, UniRef:UniRef100_Q2FUX7, UniRef:UniRef50_O86131, UniRef:UniRef90_Q2FUX7 contig_1 cds 2787347 2787796 - GCA000560365_02751 argR Arginine repressor COG:COG1438, COG:K, RefSeq:WP_000748760.1, SO:0001217, UniParc:UPI00000D7654, UniRef:UniRef100_Q2FUX5, UniRef:UniRef50_A0A2K4AHB6, UniRef:UniRef90_A0A2K4AHB6 contig_1 cds 2788163 2789692 - GCA000560365_02752 aur zinc metalloproteinase aureolysin COG:COG3227, COG:O, EC:3.4.24.29, GO:0004222, GO:0006508, GO:0046872, KEGG:K01401, NCBIProtein:EHO93748.1, RefSeq:WP_001225019.1, SO:0001217, UniParc:UPI0000052250, UniRef:UniRef100_Q2FUX4, UniRef:UniRef50_P81177, UniRef:UniRef90_P81177, VFDB:VFC0251, VFDB:VFG001314 contig_1 cds 2790116 2790643 - GCA000560365_02753 isaB immunodominant staphylococcal antigen IsaB BlastRules:WP_001044560, BlastRules:WP_001077096, GO:0005576, RefSeq:WP_001044560.1, SO:0001217, UniParc:UPI000005492F, UniRef:UniRef100_Q2FUX3, UniRef:UniRef50_Q2FUX3, UniRef:UniRef90_Q2FUX3 contig_1 cds 2790901 2791359 + GCA000560365_02754 Low-complexity protein RefSeq:WP_000734803.1, SO:0001217, UniParc:UPI00004B5D18, UniRef:UniRef100_Q2FUX2, UniRef:UniRef50_Q2FUX2, UniRef:UniRef90_Q2FUX2 contig_1 cds 2791599 2793473 + GCA000560365_02755 bglG Activator of the mannose operon (Transcriptional antiterminator), BglG family COG:COG3711, COG:K, KEGG:K02538, RefSeq:WP_000887026.1, SO:0001217, UniParc:UPI0000054931, UniRef:UniRef100_Q2FUX1, UniRef:UniRef50_A0A2I7YB65, UniRef:UniRef90_A0A2I7YB65 contig_1 cds 2793550 2795502 + GCA000560365_02756 ptsN Phosphotransferase system (PTS) mannose-specific enzyme IIBCA component COG:COG1762, COG:GT, RefSeq:WP_031808161.1, SO:0001217, UniParc:UPI0004468EF0, UniRef:UniRef100_UPI0004468EF0, UniRef:UniRef50_O31645, UniRef:UniRef90_A0A0U1MW07 contig_1 cds 2795516 2796454 + GCA000560365_02757 manA mannose-6-phosphate isomerase, class I COG:COG1482, COG:G, EC:5.3.1.8, GO:0004476, GO:0005975, GO:0008270, RefSeq:WP_001173201.1, SO:0001217, UniParc:UPI0000054933, UniRef:UniRef100_Q2G223, UniRef:UniRef50_Q59935, UniRef:UniRef90_A0A0D1I542 contig_1 cds 2796566 2799547 - GCA000560365_02758 yhgE Phage infection protein, putative COG:COG1511, COG:S, KEGG:K01421, RefSeq:WP_000785110.1, SO:0001217, UniParc:UPI00004B5D1A, UniRef:UniRef100_Q2G221, UniRef:UniRef50_Q49UI0, UniRef:UniRef90_Q2G221 contig_1 cds 2799758 2801617 + GCA000560365_02759 amidase domain-containing protein COG:COG3942, COG:M, GO:0004040, GO:0005576, RefSeq:WP_001125610.1, SO:0001217, UniParc:UPI0000696CF2, UniRef:UniRef100_A0A0E8I376, UniRef:UniRef50_Q2G222, UniRef:UniRef90_Q2G222 contig_1 cds 2801884 2802444 - GCA000560365_02760 pncA Isochorismatase-like domain-containing protein COG:COG1335, COG:HR, RefSeq:WP_000088195.1, SO:0001217, UniParc:UPI00000D7800, UniRef:UniRef100_Q2G220, UniRef:UniRef50_Q2G220, UniRef:UniRef90_Q2G220 contig_1 cds 2802612 2804519 - GCA000560365_02761 sasF cell-wall-anchored protein SasF BlastRules:WP_001151900, GO:0005576, RefSeq:WP_001151900.1, SO:0001217, UniParc:UPI00004B5D1B, UniRef:UniRef100_Q2FUW9, UniRef:UniRef50_Q2FUW9, UniRef:UniRef90_Q2FUW9 contig_1 cds 2804761 2806119 - GCA000560365_02762 gtfB accessory Sec system glycosylation chaperone GtfB GO:0031647, RefSeq:WP_000593153.1, SO:0001217, UniParc:UPI0000054938, UniRef:UniRef100_Q2FUW8, UniRef:UniRef50_A0A7U7PX78, UniRef:UniRef90_A0A5S9I5Q0 contig_1 cds 2806112 2807620 - GCA000560365_02763 gtfA accessory Sec system glycosyltransferase GtfA COG:COG0438, COG:M, GO:0016757, RefSeq:WP_000158433.1, SO:0001217, UniParc:UPI0000054939, UniRef:UniRef100_Q2FUW7, UniRef:UniRef50_A0A077UJB5, UniRef:UniRef90_A0A390ZTZ9 contig_1 cds 2807638 2810028 - GCA000560365_02764 secA2 accessory Sec system translocase SecA2 COG:COG0653, COG:U, EC:7.4.2.8, GO:0005524, GO:0005829, GO:0005886, GO:0006605, GO:0008564, GO:0015031, GO:0015450, GO:0017038, GO:0031522, GO:0043952, GO:0065002, RefSeq:WP_000680947.1, SO:0001217, UniParc:UPI000005493A, UniRef:UniRef100_Q2FUW6, UniRef:UniRef50_Q2FUW6, UniRef:UniRef90_Q2FUW6 contig_1 cds 2810018 2810977 - GCA000560365_02765 asp3 accessory Sec system protein Asp3 GO:0006886, GO:0015031, KEGG:K12270, RefSeq:WP_000916742.1, SO:0001217, UniParc:UPI00004B5D1C, UniRef:UniRef100_Q2FUW5, UniRef:UniRef50_Q2FUW5, UniRef:UniRef90_Q2FUW5 contig_1 cds 2810955 2812526 - GCA000560365_02766 asp2 accessory Sec system protein Asp2 GO:0006886, GO:0015031, KEGG:K12269, SO:0001217, UniRef:UniRef50_Q2FUW4, UniRef:UniRef90_Q2FUW4 contig_1 cds 2812513 2814066 - GCA000560365_02767 asp1 accessory Sec system protein Asp1 GO:0006886, GO:0015031, RefSeq:WP_000873197.1, SO:0001217, UniParc:UPI000005493D, UniRef:UniRef100_Q2FUW3, UniRef:UniRef50_Q2FUW3, UniRef:UniRef90_Q2FUW3 contig_1 cds 2814077 2815288 - GCA000560365_02768 secY2 accessory Sec system protein translocase subunit SecY2 COG:COG0201, COG:U, GO:0005886, GO:0006605, GO:0065002, RefSeq:WP_000916119.1, SO:0001217, UniParc:UPI000005493F, UniRef:UniRef100_Q2FUW2, UniRef:UniRef50_Q2FUW2, UniRef:UniRef90_Q2FUW2 contig_1 cds 2815418 2822233 - GCA000560365_02769 sraP Serine-rich adhesin for platelets GO:0005509, GO:0005576, GO:0007155, GO:0016020, RefSeq:WP_000044529.1, SO:0001217, UniParc:UPI0000696CF4, UniRef:UniRef100_Q2FDK5, UniRef:UniRef50_Q2FUW1, UniRef:UniRef90_Q2FUW1 contig_1 cds 2822778 2823470 - GCA000560365_02770 rutF Flavin reductase like domain-containing protein COG:C, COG:COG1853, RefSeq:WP_001109877.1, SO:0001217, UniParc:UPI0000696CF5, UniRef:UniRef100_A0A5A8VQ05, UniRef:UniRef50_K8DVZ2, UniRef:UniRef90_K8DWD5 contig_1 cds 2823736 2824164 + GCA000560365_02771 Lipoprotein RefSeq:WP_001549854.1, SO:0001217, UniParc:UPI0000054948, UniRef:UniRef100_Q2FUV9, UniRef:UniRef50_A0A853UZX6, UniRef:UniRef90_Q2FUV9 contig_1 cds 2824151 2824453 + GCA000560365_02772 Phage protein RefSeq:WP_001260013.1, SO:0001217, UniParc:UPI00004B5D1F, UniRef:UniRef100_Q2FUV8, UniRef:UniRef50_A0A7U7PXN0, UniRef:UniRef90_Q2FUV8 contig_1 cds 2824607 2824966 + GCA000560365_02773 doxX DoxX family protein RefSeq:WP_000603480.1, SO:0001217, UniParc:UPI000005494B, UniRef:UniRef100_Q2FUV7, UniRef:UniRef50_A0A1E9AB62, UniRef:UniRef90_Q2FUV7 contig_1 cds 2825051 2825662 - GCA000560365_02774 rutF Flavin reductase like domain-containing protein COG:C, COG:COG1853, RefSeq:WP_000287917.1, SO:0001217, UniParc:UPI000005494C, UniRef:UniRef100_Q2FUV6, UniRef:UniRef50_F4BMC7, UniRef:UniRef90_A0A7U7JRS4 contig_1 cds 2825741 2826217 - GCA000560365_02775 msrA peptide-methionine (S)-S-oxide reductase COG:COG0225, COG:O, EC:1.8.4.11, GO:0008113, RefSeq:WP_000301926.1, SO:0001217, UniParc:UPI000005494D, UniRef:UniRef100_Q2FUV5, UniRef:UniRef50_M7NDY9, UniRef:UniRef90_A0A131HWZ4 contig_1 cds 2826220 2826720 - GCA000560365_02776 yhbS N-acetyltransferase domain-containing protein COG:COG3153, COG:R, RefSeq:WP_000244278.1, SO:0001217, UniParc:UPI000005494E, UniRef:UniRef100_Q2FUV4, UniRef:UniRef50_Q2FUV4, UniRef:UniRef90_Q2FUV4 contig_1 cds 2826955 2827722 - GCA000560365_02777 ywqE Tyrosine-protein phosphatase COG:COG4464, COG:T, RefSeq:WP_000565310.1, SO:0001217, UniParc:UPI000005494F, UniRef:UniRef100_Q2FUV3, UniRef:UniRef50_P39852, UniRef:UniRef90_A0A0U1MU51 contig_1 cds 2827719 2828411 - GCA000560365_02778 mrp non-specific protein-tyrosine kinase COG:COG0489, COG:D, RefSeq:WP_000185864.1, SO:0001217, UniParc:UPI0000054950, UniRef:UniRef100_Q2FUV2, UniRef:UniRef50_P39851, UniRef:UniRef90_A8YPQ5 contig_1 cds 2828428 2829090 - GCA000560365_02779 capA Capsular polysaccharide biosynthesis protein CapA COG:COG3944, COG:M, GO:0004713, GO:0005886, GO:0045227, RefSeq:WP_000659675.1, SO:0001217, UniParc:UPI00000D7682, UniRef:UniRef100_Q5HCN3, UniRef:UniRef50_Q5HCN3, UniRef:UniRef90_Q5HCN3 contig_1 ncRNA-region 2829548 2829937 - icaR 3'UTR RFAM:RF02660, SO:0005836 contig_1 cds 2829938 2830498 - GCA000560365_02780 icaR ica operon transcriptional regulator IcaR BlastRules:WP_000653261, COG:COG1309, COG:K, GO:0003677, RefSeq:WP_000653261.1, SO:0001217, UniParc:UPI00000D7897, UniRef:UniRef100_Q9RQQ0, UniRef:UniRef50_Q5HKQ1, UniRef:UniRef90_Q9RQQ0 contig_1 ncRNA-region 2830496 2830570 - icaR 5' UTR RFAM:RF02661, SO:0005836 contig_1 cds 2830662 2831900 + GCA000560365_02781 icaA N-acetylglucosaminyltransferase, involved in polysaccharide intercellular adhesin(PIA) synthesis COG:COG1215, COG:N, EC:2.4.1.-, GO:0005886, GO:0008375, GO:0042710, GO:0043708, RefSeq:WP_001159430.1, SO:0001217, UniParc:UPI00000CAC33, UniRef:UniRef100_Q9RQP9, UniRef:UniRef50_Q5HKQ0, UniRef:UniRef90_Q9RQP9, VFDB:VFC0271, VFDB:VFG001285 contig_1 cds 2831864 2832169 + GCA000560365_02782 icaD intercellular adhesion protein D, involved in polysaccharide intercellular adhesin(PIA) synthesis GO:0000271, GO:0005886, GO:0008375, KEGG:K21461, RefSeq:WP_000240580.1, SO:0001217, UniParc:UPI0000054955, UniRef:UniRef100_Q9RQP8, UniRef:UniRef50_Q5HKP9, UniRef:UniRef90_Q9RQP8, VFDB:VFC0271, VFDB:VFG001286 contig_1 cds 2832166 2833038 + GCA000560365_02783 icaB N-deacetylase, involved in polysaccharide intercellular adhesin(PIA) synthesis COG:COG0726, COG:GM, EC:3.5.1.-, GO:0000271, GO:0005576, GO:0005975, GO:0016811, GO:0019213, KEGG:K21478, RefSeq:WP_000877317.1, SO:0001217, UniParc:UPI00000DA049, UniRef:UniRef100_Q9RQP7, UniRef:UniRef50_Q9RQP7, UniRef:UniRef90_Q9RQP7, VFDB:VFC0271, VFDB:VFG001287 contig_1 cds 2833025 2834077 + GCA000560365_02784 icaC polysaccharide intercellular adhesin biosynthesis/export protein IcaC BlastRules:WP_000723836, BlastRules:WP_002470903, COG:COG3936, COG:G, GO:0005886, GO:0009246, GO:0016413, KEGG:K21462, NCBIProtein:AUU58561.1, RefSeq:WP_000723836.1, SO:0001217, UniParc:UPI0000054957, UniRef:UniRef100_Q9RQP6, UniRef:UniRef50_Q5HKP7, UniRef:UniRef90_Q9RQP6 contig_1 ncRNA 2834190 2834442 + GCA000560365_02785 S35 Staphylococcus sRNA 35 (srn_0335) RFAM:RF02894, SO:0000655 contig_1 cds 2834524 2836569 - GCA000560365_02786 lip1 YSIRK domain-containing triacylglycerol lipase Lip1 BlastRules:WP_000842036, COG:COG1075, COG:I, EC:3.1.1.3, GO:0004806, GO:0005509, GO:0005576, GO:0016042, GO:0016298, GO:0046872, KEGG:K01046, SO:0001217, UniParc:UPI00000DA04A, UniRef:UniRef100_Q2FUU5, UniRef:UniRef50_Q6GDD3, UniRef:UniRef90_P65288 contig_1 cds 2837659 2838291 - GCA000560365_02787 hisIE bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE EC:3.5.4.19, EC:3.6.1.31, GO:0000105, GO:0004635, GO:0004636, GO:0005524, GO:0005737, RefSeq:WP_000170492.1, SO:0001217, UniParc:UPI0000696CF6, UniRef:UniRef100_Q2FUU3, UniRef:UniRef50_P64355, UniRef:UniRef90_P64355 contig_1 cds 2838288 2839046 - GCA000560365_02788 hisF Imidazole glycerol phosphate synthase subunit HisF EC:4.3.2.10, GO:0000105, GO:0000107, GO:0005737, GO:0016829, SO:0001217, UniParc:UPI000012C83B, UniRef:UniRef100_Q2FDI8, UniRef:UniRef50_Q9X0C6, UniRef:UniRef90_P64361 contig_1 cds 2839043 2839747 - GCA000560365_02789 hisA 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase COG:COG0106, COG:E, EC:5.3.1.16, GO:0000105, GO:0000162, GO:0003949, GO:0005737, RefSeq:WP_000571736.1, SO:0001217, UniParc:UPI000005495B, UniRef:UniRef100_Q2FUU2, UniRef:UniRef50_Q2FUU2, UniRef:UniRef90_Q2FUU2 contig_1 cds 2839740 2840318 - GCA000560365_02790 hisH imidazole glycerol phosphate synthase subunit HisH COG:COG0118, COG:E, EC:4.3.2.10, GO:0000105, GO:0000107, GO:0004359, GO:0005737, GO:0016829, RefSeq:WP_000635623.1, SO:0001217, UniParc:UPI000005495C, UniRef:UniRef100_Q5HCM2, UniRef:UniRef50_Q4A047, UniRef:UniRef90_Q5HCM2 contig_1 cds 2840315 2840893 - GCA000560365_02791 hisB imidazoleglycerol-phosphate dehydratase HisB COG:COG0131, COG:E, EC:4.2.1.19, GO:0000105, GO:0004424, GO:0005737, RefSeq:WP_000640266.1, SO:0001217, UniParc:UPI000012C871, UniRef:UniRef100_Q2FUU0, UniRef:UniRef50_Q2FUU0, UniRef:UniRef90_Q2FUU0 contig_1 cds 2840862 2841875 - GCA000560365_02792 hisC Putative pyridoxal phosphate-dependent acyltransferase COG:COG0079, COG:E, RefSeq:WP_000639183.1, SO:0001217, UniParc:UPI000005495F, UniRef:UniRef100_Q2FUT9, UniRef:UniRef50_A0A389Q8Y1, UniRef:UniRef90_A0A389Q8Y1 contig_1 cds 2841891 2843141 - GCA000560365_02793 hisD histidinol dehydrogenase COG:COG0141, COG:E, EC:1.1.1.23, GO:0000105, GO:0004399, GO:0005829, GO:0008270, GO:0051287, KEGG:K00013, RefSeq:WP_000930643.1, SO:0001217, UniParc:UPI0000696CF7, UniRef:UniRef100_Q5HCL9, UniRef:UniRef50_Q8CQ95, UniRef:UniRef90_P63952 contig_1 cds 2843134 2843748 - GCA000560365_02794 hisG ATP phosphoribosyltransferase COG:COG0040, COG:E, EC:2.4.2.17, GO:0000105, GO:0003879, GO:0005524, GO:0005737, KEGG:K00765, RefSeq:WP_000944150.1, SO:0001217, UniParc:UPI0000696CF8, UniRef:UniRef100_Q2FDI2, UniRef:UniRef50_Q2FUT7, UniRef:UniRef90_Q2FUT7 contig_1 cds 2843766 2844584 - GCA000560365_02795 hisZ ATP phosphoribosyltransferase regulatory subunit COG:COG3705, COG:E, GO:0000105, GO:0005737, GO:0016740, RefSeq:WP_001065590.1, SO:0001217, UniParc:UPI00004B5D24, UniRef:UniRef100_Q2FUT6, UniRef:UniRef50_Q2FUT6, UniRef:UniRef90_Q2FUT6 contig_1 cds 2844889 2846013 - GCA000560365_02796 NodB-like y domain-containing protein RefSeq:WP_000549223.1, SO:0001217, UniParc:UPI0000054963, UniRef:UniRef100_Q2FUT5, UniRef:UniRef50_Q2FUT5, UniRef:UniRef90_Q2FUT5 contig_1 cds 2846131 2846628 - GCA000560365_02797 rimL N-acetyltransferase domain-containing protein COG:COG1670, COG:JO, RefSeq:WP_000610978.1, SO:0001217, UniParc:UPI0000054964, UniRef:UniRef100_Q2FUT4, UniRef:UniRef50_Q2FUT4, UniRef:UniRef90_Q2FUT4 contig_1 cds 2846675 2847508 - GCA000560365_02798 ecfT Energy-coupling factor transporter transmembrane protein EcfT COG:COG0619, COG:H, KEGG:K16785, RefSeq:WP_001077826.1, SO:0001217, UniParc:UPI0000054965, UniRef:UniRef100_Q2FUT3, UniRef:UniRef50_A0A3A1YCN1, UniRef:UniRef90_Q2FUT3 contig_1 cds 2847505 2849217 - GCA000560365_02799 ecfA2 energy-coupling factor transporter ATPase COG:COG1122, COG:PR, EC:7.-.-.-, GO:0005524, GO:0006810, GO:0009898, GO:0016887, GO:0042626, GO:0043190, RefSeq:WP_000138648.1, SO:0001217, UniParc:UPI0000696CF9, UniRef:UniRef100_A0A0E8I7J5, UniRef:UniRef50_Q7A342, UniRef:UniRef90_Q7A342 contig_1 cds 2849270 2849824 - GCA000560365_02800 eCF-S ECF-type riboflavin transporter substrate-binding protein COG:COG4720, COG:H, GO:0005886, GO:0016020, KEGG:K16924, RefSeq:WP_000743717.1, SO:0001217, UniParc:UPI00004B5D26, UniRef:UniRef100_Q2FUT1, UniRef:UniRef50_Q2FUT1, UniRef:UniRef90_Q2FUT1 contig_1 cds 2849853 2850701 - GCA000560365_02801 DNA-directed RNA polymerase subunit delta COG:COG1912, COG:HV, RefSeq:WP_000528923.1, SO:0001217, UniParc:UPI0000054968, UniRef:UniRef100_Q2FUT0, UniRef:UniRef50_A0A2L0D2I0, UniRef:UniRef90_Q2FUT0 contig_1 cds 2851081 2851596 + GCA000560365_02802 yceI UPF0312 protein SAOUHSC_03022 COG:COG2353, COG:R, RefSeq:WP_000181129.1, SO:0001217, UniParc:UPI000005496A, UniRef:UniRef100_Q2FUS9, UniRef:UniRef50_Q2FUS9, UniRef:UniRef90_Q2FUS9 contig_1 cds 2851745 2852719 - GCA000560365_02803 drp35 Lactonase drp35 COG:COG3386, COG:G, EC:3.1.1.-, GO:0005737, GO:0016787, GO:0046872, KEGG:K02352, SO:0001217, UniParc:UPI00000CAC56, UniRef:UniRef100_Q2FUS8, UniRef:UniRef50_Q9S0S3, UniRef:UniRef90_Q9S0S3 contig_1 cds 2852960 2853916 + GCA000560365_02804 trhO rhodanese-related sulfurtransferase COG:COG1054, COG:J, EC:1.14.-.-, GO:0006400, GO:0016705, KEGG:K07146, RefSeq:WP_001109273.1, SO:0001217, UniParc:UPI000005496C, UniRef:UniRef100_Q2FUS7, UniRef:UniRef50_Q2NIJ6, UniRef:UniRef90_Q2FUS7 contig_1 cds 2854068 2854706 + GCA000560365_02805 pcp pyroglutamyl-peptidase I COG:COG2039, COG:O, EC:3.4.19.3, GO:0005829, GO:0006508, GO:0008234, GO:0016920, KEGG:K01304, RefSeq:WP_000547833.1, SO:0001217, UniParc:UPI000005496D, UniRef:UniRef100_Q2FUS6, UniRef:UniRef50_Q53596, UniRef:UniRef90_Q53596 contig_1 cds 2854825 2855592 - GCA000560365_02806 DUF1129 domain-containing protein RefSeq:WP_000949560.1, SO:0001217, UniParc:UPI00004B5D29, UniRef:UniRef100_Q2FUS5, UniRef:UniRef50_A0A7U7JRQ9, UniRef:UniRef90_A0A7U7JRQ9 contig_1 cds 2855582 2855920 - GCA000560365_02807 padR Transcription regulator PadR N-terminal domain-containing protein COG:COG1695, COG:K, RefSeq:WP_000116417.1, SO:0001217, UniParc:UPI00004B5D2A, UniRef:UniRef100_Q2FUS4, UniRef:UniRef50_Q2FUS4, UniRef:UniRef90_Q2FUS4 contig_1 cds 2856087 2856551 + GCA000560365_02808 bstA bacillithiol transferase BstA BlastRules:WP_000208915, BlastRules:WP_003243944, RefSeq:WP_000208915.1, SO:0001217, UniParc:UPI00004B5D2B, UniRef:UniRef100_Q2FUS3, UniRef:UniRef50_Q2FUS3, UniRef:UniRef90_Q2FUS3 contig_1 cds 2856789 2858207 + GCA000560365_02809 citT 2-oxoglutarate/malate translocator-like proteinue COG:COG0471, COG:G, KEGG:K03319, RefSeq:WP_000432356.1, SO:0001217, UniParc:UPI00000522E4, UniRef:UniRef100_Q2FUS2, UniRef:UniRef50_Q7WS08, UniRef:UniRef90_Q7WS08 contig_1 cds 2858620 2859528 - GCA000560365_02810 rarD EamA family transporter RarD COG:COG2962, COG:R, GO:0005215, GO:0005886, GO:0006810, KEGG:K05786, RefSeq:WP_001083804.1, SO:0001217, UniParc:UPI00004B5D2C, UniRef:UniRef100_Q2FUS1, UniRef:UniRef50_Q2FUS1, UniRef:UniRef90_Q2FUS1 contig_1 cds 2859753 2860328 + GCA000560365_02811 DNA-binding protein RefSeq:WP_000174578.1, SO:0001217, UniParc:UPI0000054973, UniRef:UniRef100_Q2FUS0, UniRef:UniRef50_Q2FUS0, UniRef:UniRef90_Q2FUS0 contig_1 cds 2860493 2861509 + GCA000560365_02812 nixA Nickel transporter NixA COG:COG3376, COG:P, GO:0005886, GO:0015099, KEGG:K07241, RefSeq:WP_000215642.1, SO:0001217, UniParc:UPI0000696CFA, UniRef:UniRef100_Q2FUR9, UniRef:UniRef50_Q2FUR9, UniRef:UniRef90_Q2FUR9 contig_1 cds 2861752 2862546 + GCA000560365_02813 nhoA Arylamine N-acetyltransferase COG:COG2162, COG:Q, RefSeq:WP_001017423.1, SO:0001217, UniParc:UPI00004B5D2D, UniRef:UniRef100_Q2FUR8, UniRef:UniRef50_Q2FUR8, UniRef:UniRef90_Q2FUR8 contig_1 cds 2862680 2863192 - GCA000560365_02814 hdeD HdeD family acid-resistance protein COG:COG3247, COG:R, RefSeq:WP_000410771.1, SO:0001217, UniParc:UPI00004B5D2E, UniRef:UniRef100_Q2FUR7, UniRef:UniRef50_Q2FUR7, UniRef:UniRef90_Q2FUR7 contig_1 cds 2863475 2864233 + GCA000560365_02815 vraD peptide resistance ABC transporter ATP-binding subunit VraD BlastRules:WP_000154162, COG:COG1136, COG:M, RefSeq:WP_000154162.1, SO:0001217, UniParc:UPI0000054977, UniRef:UniRef100_Q2FUR6, UniRef:UniRef50_O34697, UniRef:UniRef90_A0A0Z4JTA0 contig_1 cds 2864223 2866103 + GCA000560365_02816 vraE peptide resistance ABC transporter permease subunit VraE BlastRules:WP_000143649, KEGG:K11632, RefSeq:WP_000143642.1, SO:0001217, UniParc:UPI00004B5D2F, UniRef:UniRef100_A0A0E7PD33, UniRef:UniRef50_Q9KWJ6, UniRef:UniRef90_Q9KWJ6 contig_1 cds 2866196 2866387 + GCA000560365_02817 vraH peptide resistance ABC transporter activity modulator VraH BlastRules:WP_000672038, RefSeq:WP_000672038.1, SO:0001217, UniParc:UPI0000054979, UniRef:UniRef100_A0A1M3SJC8, UniRef:UniRef50_Q5HS20, UniRef:UniRef90_A0A7Z7R167 contig_1 cds 2866399 2866935 + GCA000560365_02818 IS30 family transposase GO:0004803, RefSeq:WP_001549881.1, SO:0001217, UniParc:UPI00004B5D30, UniRef:UniRef100_Q2FUR3, UniRef:UniRef50_B9E9N8, UniRef:UniRef90_A0A380END2 contig_1 cds 2866995 2867492 - GCA000560365_02819 Phage tail protein RefSeq:WP_000586232.1, SO:0001217, UniParc:UPI000005497B, UniRef:UniRef100_Q2FUR2, UniRef:UniRef50_Q2FUR2, UniRef:UniRef90_Q2FUR2 contig_1 cds 2867950 2868141 + GCA000560365_02820 vraH peptide resistance ABC transporter activity modulator VraH BlastRules:WP_000672038, RefSeq:WP_000672039.1, SO:0001217, UniParc:UPI000005497E, UniRef:UniRef100_X5E1M5, UniRef:UniRef50_Q5HS20, UniRef:UniRef90_A0A7Z7R167 contig_1 cds 2868534 2868734 + GCA000560365_02821 cspA Cold shock protein CspA COG:COG1278, COG:K, KEGG:K03704, RefSeq:WP_001059079.1, SO:0001217, UniParc:UPI00000D77A7, UniRef:UniRef100_Q2FUQ9, UniRef:UniRef50_P0C0F1, UniRef:UniRef90_Q2FUQ9 contig_1 cds 2868861 2869430 - GCA000560365_02822 xRE Transcriptional regulator COG:COG1476, COG:K, RefSeq:WP_001054118.1, SO:0001217, UniParc:UPI00000DA05D, UniRef:UniRef100_Q2FUQ8, UniRef:UniRef50_A0A0H2VIN2, UniRef:UniRef90_A0A391EYF8 contig_1 cds 2869690 2870085 - GCA000560365_02823 DUF3147 domain-containing protein RefSeq:WP_000779136.1, SO:0001217, UniParc:UPI0000054982, UniRef:UniRef100_Q2FUQ7, UniRef:UniRef50_Q2FUQ7, UniRef:UniRef90_Q2FUQ7 contig_1 cds 2870153 2870506 - GCA000560365_02824 Permease RefSeq:WP_000491382.1, SO:0001217, UniParc:UPI00000D771D, UniRef:UniRef100_Q2FUQ6, UniRef:UniRef50_Q2FUQ6, UniRef:UniRef90_Q2FUQ6 contig_2 ncRNA 1 92 + GCA000560365_02825 S35 (5' truncated) Staphylococcus sRNA 35 (srn_0335) RFAM:RF02894, SO:0000655 contig_2 cds 220 1059 - GCA000560365_02826 noc nucleoid occlusion protein COG:COG1475, COG:D, GO:0032466, GO:0043565, KEGG:K03497, RefSeq:WP_000742837.1, SO:0001217, UniParc:UPI0000054984, UniRef:UniRef100_Q2FUQ5, UniRef:UniRef50_A0A6N3FL57, UniRef:UniRef90_Q2FUQ5 contig_2 cds 1102 1821 - GCA000560365_02827 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG COG:COG0357, COG:J, EC:2.1.1.-, EC:2.1.1.170, GO:0005829, GO:0008168, GO:0031167, GO:0046118, GO:0070043, KEGG:K03501, RefSeq:WP_000215595.1, SO:0001217, UniParc:UPI0000054985, UniRef:UniRef100_Q2FUQ4, UniRef:UniRef50_P25813, UniRef:UniRef90_Q2FUQ4 contig_2 cds 1821 3698 - GCA000560365_02828 mnmG tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG COG:COG0445, COG:J, GO:0002098, GO:0005829, GO:0008033, GO:0030488, GO:0050660, KEGG:K03495, RefSeq:WP_000249662.1, SO:0001217, UniParc:UPI000005228D, UniRef:UniRef100_Q2FUQ3, UniRef:UniRef50_Q2FUQ3, UniRef:UniRef90_Q2FUQ3 contig_2 cds 3765 5144 - GCA000560365_02829 mnmE tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE EC:3.6.-.-, GO:0002098, GO:0003924, GO:0005525, GO:0005829, GO:0006400, GO:0030488, GO:0046872, RefSeq:WP_000362503.1, SO:0001217, UniParc:UPI00004B5D33, UniRef:UniRef100_Q2FDE8, UniRef:UniRef50_Q8DPZ8, UniRef:UniRef90_Q931E1 contig_2 cds 5283 5630 - GCA000560365_02830 rnpA ribonuclease P protein component COG:COG0594, COG:J, EC:3.1.26.5, GO:0000049, GO:0001682, GO:0004526, GO:0008033, GO:0030677, GO:0042781, SO:0001217, UniParc:UPI0000134441, UniRef:UniRef100_Q5HCI2, UniRef:UniRef50_Q2FUQ1, UniRef:UniRef90_Q2FUQ1 contig_2 cds 5757 5894 - GCA000560365_02831 rpmH 50S ribosomal protein L34 COG:COG0230, COG:J, GO:0000315, GO:0003735, GO:0005840, GO:0006412, GO:0022625, GO:1990904, KEGG:K02914, RefSeq:WP_000240855.1, SO:0001217, UniParc:UPI0000133FD1, UniRef:UniRef100_Q2FUQ0, UniRef:UniRef50_A5VMV2, UniRef:UniRef90_Q2FUQ0