SEQF1069.2|AE014133.2	CCTyper	repeat_region	1327814	1328245	432	+	.	ID=SEQF1069.2|AE014133.2_1;Genome_ID=SEQF1069.2;Note=Predictor:CCtyper;Start:1327814;End:1328245;Consensus_Repeat:GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Number_of_Repeats:7;Repeat_Length:36;Average_Spacer_Length:30;Repeat_Identity:89.6;Spacer_Identity:41.9;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.549;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1069.2|AE014133.2	CCTyper	direct_repeat	1327814	1327849	36	+	.	ID=SEQF1069.2|AE014133.2_1_REPEAT1;Parent=SEQF1069.2|AE014133.2_1;Note=ATTTTAGTAAATCAGTAACTAACATGGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1069.2|AE014133.2	CCTyper	binding_site	1327850	1327879	30	+	.	ID=SEQF1069.2|AE014133.2_1_SPACER1;Parent=SEQF1069.2|AE014133.2_1;Note=TCAAATGTAGTAGTTACTTTCTTTTCACAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1069.2|AE014133.2	CCTyper	direct_repeat	1327880	1327915	36	+	.	ID=SEQF1069.2|AE014133.2_1_REPEAT2;Parent=SEQF1069.2|AE014133.2_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1069.2|AE014133.2	CCTyper	binding_site	1327916	1327945	30	+	.	ID=SEQF1069.2|AE014133.2_1_SPACER2;Parent=SEQF1069.2|AE014133.2_1;Note=TGTGGCAAGTCATGTCCGAATACATAGGCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1069.2|AE014133.2	CCTyper	direct_repeat	1327946	1327981	36	+	.	ID=SEQF1069.2|AE014133.2_1_REPEAT3;Parent=SEQF1069.2|AE014133.2_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1069.2|AE014133.2	CCTyper	binding_site	1327982	1328011	30	+	.	ID=SEQF1069.2|AE014133.2_1_SPACER3;Parent=SEQF1069.2|AE014133.2_1;Note=GTTTGTCTATTGTCTAATTGAAAATATTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1069.2|AE014133.2	CCTyper	direct_repeat	1328012	1328047	36	+	.	ID=SEQF1069.2|AE014133.2_1_REPEAT4;Parent=SEQF1069.2|AE014133.2_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1069.2|AE014133.2	CCTyper	binding_site	1328048	1328077	30	+	.	ID=SEQF1069.2|AE014133.2_1_SPACER4;Parent=SEQF1069.2|AE014133.2_1;Note=CTAACTATGATGACACAACAGCTTTTAGCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1069.2|AE014133.2	CCTyper	direct_repeat	1328078	1328113	36	+	.	ID=SEQF1069.2|AE014133.2_1_REPEAT5;Parent=SEQF1069.2|AE014133.2_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1069.2|AE014133.2	CCTyper	binding_site	1328114	1328143	30	+	.	ID=SEQF1069.2|AE014133.2_1_SPACER5;Parent=SEQF1069.2|AE014133.2_1;Note=AGAGCACTAACTGCGCTAGCTGGTTCAATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1069.2|AE014133.2	CCTyper	direct_repeat	1328144	1328179	36	+	.	ID=SEQF1069.2|AE014133.2_1_REPEAT6;Parent=SEQF1069.2|AE014133.2_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1069.2|AE014133.2	CCTyper	binding_site	1328180	1328209	30	+	.	ID=SEQF1069.2|AE014133.2_1_SPACER6;Parent=SEQF1069.2|AE014133.2_1;Note=TCACCATATTAATTAATGGCGTTTCCTTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1069.2|AE014133.2	CCTyper	direct_repeat	1328210	1328245	36	+	.	ID=SEQF1069.2|AE014133.2_1_REPEAT7;Parent=SEQF1069.2|AE014133.2_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1069.2|AE014133.2	CCTyper	OPERON	1662432	1671711	9280	-	.	ID=SEQF1069.2|AE014133.2@42;Genome_ID=SEQF1069.2;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-C;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=I-C;Best_score=21.0;Genes=Cas2_4_CAS-I-II-III-IV-V-VI,Cas1_0_IC,Cas4_0_I-II,Cas7_0_IC,Cas8c_0_CAS-I-C,Cas5_0_IC,Cas3_1_CAS-I,WYL_3_CAS-I-II-III-IV-V-VI;Positions=1545,1546,1549,1550,1551,1553,1554,1555;E-values=2.00e-30,7.80e-62,2.00e-31,2.50e-123,2.60e-97,7.20e-92,1.10e-103,4.70e-14;CoverageSeq=0.929,0.985,0.844,0.969,0.979,0.81,0.895,0.517;CoverageHMM=0.978,0.382,0.983,0.996,0.75,0.995,0.958,0.884;Strand_Interference=-1;Strand_Adaptation=-1
SEQF1069.2|AE014133.2	CCTyper	OPERON	1329083	1334979	5897	-	.	ID=SEQF1069.2|AE014133.2@34;Genome_ID=SEQF1069.2;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Csn2_1_CAS-II-A,Cas2_5_CAS-I-II-III-IV-V-VI,Cas1_4_CAS-I-II-III-IV-V-VI,Cas9_1_II;Positions=1234,1235,1236,1237;E-values=1.00e-106,1.40e-51,1.20e-102,0.00e+00;CoverageSeq=0.982,0.965,0.931,0.996;CoverageHMM=0.995,0.983,0.996,0.999;Strand_Interference=-1;Strand_Adaptation=-1
SEQF1069.2|AE014133.2	CCTyper	CDS	1662736	1663131	132	-	.	ID=SEQF1069.2|AE014133.2_1546_cas;Genome_ID=SEQF1069.2;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IC;coding_strand=-;E-value=7.799999999999999e-62;Score=206.1;Coverage_Seq=0.9848484848484849;Coverage_Hmm=0.38235294117647056
SEQF1069.2|AE014133.2	CCTyper	CDS	1330076	1330942	289	-	.	ID=SEQF1069.2|AE014133.2_1236_cas;Genome_ID=SEQF1069.2;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.2e-102;Score=339.6;Coverage_Seq=0.9307958477508651;Coverage_Hmm=0.9963636363636363
SEQF1069.2|AE014133.2	CCTyper	CDS	1662432	1662725	98	-	.	ID=SEQF1069.2|AE014133.2_1545_cas;Genome_ID=SEQF1069.2;Feature_type=CDS;Product=Cas Prediction : Cas2_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.9999999999999998e-30;Score=101.8;Coverage_Seq=0.9285714285714286;Coverage_Hmm=0.9775280898876404
SEQF1069.2|AE014133.2	CCTyper	CDS	1329735	1330079	115	-	.	ID=SEQF1069.2|AE014133.2_1235_cas;Genome_ID=SEQF1069.2;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.4e-51;Score=170.4;Coverage_Seq=0.9652173913043478;Coverage_Hmm=0.9827586206896551
SEQF1069.2|AE014133.2	CCTyper	CDS	1668084	1670486	801	-	.	ID=SEQF1069.2|AE014133.2_1554_cas;Genome_ID=SEQF1069.2;Feature_type=CDS;Product=Cas Prediction : Cas3_1_CAS-I;coding_strand=-;E-value=1.1e-103;Score=344.7;Coverage_Seq=0.8951310861423221;Coverage_Hmm=0.9583892617449664
SEQF1069.2|AE014133.2	CCTyper	CDS	1663756	1664427	224	-	.	ID=SEQF1069.2|AE014133.2_1549_cas;Genome_ID=SEQF1069.2;Feature_type=CDS;Product=Cas Prediction : Cas4_0_I-II;coding_strand=-;E-value=2e-31;Score=105.9;Coverage_Seq=0.84375;Coverage_Hmm=0.9833333333333333
SEQF1069.2|AE014133.2	CCTyper	CDS	1667240	1667983	248	-	.	ID=SEQF1069.2|AE014133.2_1553_cas;Genome_ID=SEQF1069.2;Feature_type=CDS;Product=Cas Prediction : Cas5_0_IC;coding_strand=-;E-value=7.2e-92;Score=303.8;Coverage_Seq=0.8104838709677419;Coverage_Hmm=0.9950738916256158
SEQF1069.2|AE014133.2	CCTyper	CDS	1664429	1665304	292	-	.	ID=SEQF1069.2|AE014133.2_1550_cas;Genome_ID=SEQF1069.2;Feature_type=CDS;Product=Cas Prediction : Cas7_0_IC;coding_strand=-;E-value=2.5e-123;Score=407.7;Coverage_Seq=0.9691780821917808;Coverage_Hmm=0.9964788732394366
SEQF1069.2|AE014133.2	CCTyper	CDS	1665308	1666717	470	-	.	ID=SEQF1069.2|AE014133.2_1551_cas;Genome_ID=SEQF1069.2;Feature_type=CDS;Product=Cas Prediction : Cas8c_0_CAS-I-C;coding_strand=-;E-value=2.6e-97;Score=323.5;Coverage_Seq=0.9787234042553191;Coverage_Hmm=0.75
SEQF1069.2|AE014133.2	CCTyper	CDS	1330942	1334979	1346	-	.	ID=SEQF1069.2|AE014133.2_1237_cas;Genome_ID=SEQF1069.2;Feature_type=CDS;Product=Cas Prediction : Cas9_1_II;coding_strand=-;E-value=0.0;Score=1274.2;Coverage_Seq=0.9955423476968797;Coverage_Hmm=0.9991071428571429
SEQF1069.2|AE014133.2	CCTyper	CDS	1329083	1329745	221	-	.	ID=SEQF1069.2|AE014133.2_1234_cas;Genome_ID=SEQF1069.2;Feature_type=CDS;Product=Cas Prediction : Csn2_1_CAS-II-A;coding_strand=-;E-value=1e-106;Score=352.3;Coverage_Seq=0.9819004524886877;Coverage_Hmm=0.9954128440366973
SEQF1069.2|AE014133.2	CCTyper	CDS	1670737	1671711	325	-	.	ID=SEQF1069.2|AE014133.2_1555_cas;Genome_ID=SEQF1069.2;Feature_type=CDS;Product=Cas Prediction : WYL_3_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=4.7e-14;Score=49.6;Coverage_Seq=0.5169230769230769;Coverage_Hmm=0.8837209302325582