SEQF1208.2|U00096.3	CCTyper	repeat_region	2877701	2878463	763	+	.	ID=SEQF1208.2|U00096.3_1;Genome_ID=SEQF1208.2;Note=Predictor:CCtyper;Start:2877701;End:2878463;Consensus_Repeat:CGGTTTATCCCCGCTGGCGCGGGGAACTC;Number_of_Repeats:13;Repeat_Length:29;Average_Spacer_Length:32.2;Repeat_Identity:94.9;Spacer_Identity:43.2;Spacer_Length_Sem:0.1;Trusted:True;Cas_Type_Prediction: I-E;Cas_Subtype_Prediction:I-E;Subtype_Probability:1.0;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1208.2|U00096.3	CCTyper	direct_repeat	2877701	2877729	29	+	.	ID=SEQF1208.2|U00096.3_1_REPEAT1;Parent=SEQF1208.2|U00096.3_1;Note=CGGTTTATCCCCGCTGATGCGGGGAACAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1208.2|U00096.3	CCTyper	binding_site	2877730	2877761	32	+	.	ID=SEQF1208.2|U00096.3_1_SPACER1;Parent=SEQF1208.2|U00096.3_1;Note=CAGCGTCAGGCGTGAAATCTCACCGTCGTTGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1208.2|U00096.3	CCTyper	direct_repeat	2877762	2877790	29	+	.	ID=SEQF1208.2|U00096.3_1_REPEAT2;Parent=SEQF1208.2|U00096.3_1;Note=CGGTTTATCCCTGCTGGCGCGGGGAACTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1208.2|U00096.3	CCTyper	binding_site	2877791	2877822	32	+	.	ID=SEQF1208.2|U00096.3_1_SPACER2;Parent=SEQF1208.2|U00096.3_1;Note=TCGGTTCAGGCGTTGCAAACCTGGCTACCGGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1208.2|U00096.3	CCTyper	direct_repeat	2877823	2877851	29	+	.	ID=SEQF1208.2|U00096.3_1_REPEAT3;Parent=SEQF1208.2|U00096.3_1;Note=CGGTTTATCCCCGCTAACGCGGGGAACTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1208.2|U00096.3	CCTyper	binding_site	2877852	2877883	32	+	.	ID=SEQF1208.2|U00096.3_1_SPACER3;Parent=SEQF1208.2|U00096.3_1;Note=GTAGTCCATCATTCCACCTATGTCTGAACTCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1208.2|U00096.3	CCTyper	direct_repeat	2877884	2877912	29	+	.	ID=SEQF1208.2|U00096.3_1_REPEAT4;Parent=SEQF1208.2|U00096.3_1;Note=CGGTTTATCCCCGCTGGCGCGGGGAACTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1208.2|U00096.3	CCTyper	binding_site	2877913	2877944	32	+	.	ID=SEQF1208.2|U00096.3_1_SPACER4;Parent=SEQF1208.2|U00096.3_1;Note=CCGGGGGATAATGTTTACGGTCATGCGCCCCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1208.2|U00096.3	CCTyper	direct_repeat	2877945	2877973	29	+	.	ID=SEQF1208.2|U00096.3_1_REPEAT5;Parent=SEQF1208.2|U00096.3_1;Note=CGGTTTATCCCCGCTGGCGCGGGGAACTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1208.2|U00096.3	CCTyper	binding_site	2877974	2878005	32	+	.	ID=SEQF1208.2|U00096.3_1_SPACER5;Parent=SEQF1208.2|U00096.3_1;Note=TGGGCGGCTTGCCTTGCAGCCAGCTCCAGCAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1208.2|U00096.3	CCTyper	direct_repeat	2878006	2878034	29	+	.	ID=SEQF1208.2|U00096.3_1_REPEAT6;Parent=SEQF1208.2|U00096.3_1;Note=CGGTTTATCCCCGCTGGCGCGGGGAACTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1208.2|U00096.3	CCTyper	binding_site	2878035	2878066	32	+	.	ID=SEQF1208.2|U00096.3_1_SPACER6;Parent=SEQF1208.2|U00096.3_1;Note=AAGCTGGCTGGCAATCTCTTTCGGGGTGAGTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1208.2|U00096.3	CCTyper	direct_repeat	2878067	2878095	29	+	.	ID=SEQF1208.2|U00096.3_1_REPEAT7;Parent=SEQF1208.2|U00096.3_1;Note=CGGTTTATCCCCGCTGGCGCGGGGAACTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1208.2|U00096.3	CCTyper	binding_site	2878096	2878127	32	+	.	ID=SEQF1208.2|U00096.3_1_SPACER7;Parent=SEQF1208.2|U00096.3_1;Note=TAGTTTCCGTATCTCCGGATTTATAAAGCTGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1208.2|U00096.3	CCTyper	direct_repeat	2878128	2878156	29	+	.	ID=SEQF1208.2|U00096.3_1_REPEAT8;Parent=SEQF1208.2|U00096.3_1;Note=CGGTTTATCCCCGCTGGCGCGGGGAACTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1208.2|U00096.3	CCTyper	binding_site	2878157	2878189	33	+	.	ID=SEQF1208.2|U00096.3_1_SPACER8;Parent=SEQF1208.2|U00096.3_1;Note=GCAGGCGGCGACGCGCAGGGTATGCGCGATTCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1208.2|U00096.3	CCTyper	direct_repeat	2878190	2878218	29	+	.	ID=SEQF1208.2|U00096.3_1_REPEAT9;Parent=SEQF1208.2|U00096.3_1;Note=CGGTTTATCCCCGCTGGCGCGGGGAACTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1208.2|U00096.3	CCTyper	binding_site	2878219	2878251	33	+	.	ID=SEQF1208.2|U00096.3_1_SPACER9;Parent=SEQF1208.2|U00096.3_1;Note=GCGACCGCTCAGAAATTCCAGACCCGATCCAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1208.2|U00096.3	CCTyper	direct_repeat	2878252	2878280	29	+	.	ID=SEQF1208.2|U00096.3_1_REPEAT10;Parent=SEQF1208.2|U00096.3_1;Note=CGGTTTATCCCCGCTGGCGCGGGGAACTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1208.2|U00096.3	CCTyper	binding_site	2878281	2878312	32	+	.	ID=SEQF1208.2|U00096.3_1_SPACER10;Parent=SEQF1208.2|U00096.3_1;Note=TCAACATTATCAATTACAACCGACAGGGAGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1208.2|U00096.3	CCTyper	direct_repeat	2878313	2878341	29	+	.	ID=SEQF1208.2|U00096.3_1_REPEAT11;Parent=SEQF1208.2|U00096.3_1;Note=CGGTTTATCCCCGCTGGCGCGGGGAACTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1208.2|U00096.3	CCTyper	binding_site	2878342	2878373	32	+	.	ID=SEQF1208.2|U00096.3_1_SPACER11;Parent=SEQF1208.2|U00096.3_1;Note=AGCGTGTTCGGCATCACCTTTGGCTTCGGCTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1208.2|U00096.3	CCTyper	direct_repeat	2878374	2878402	29	+	.	ID=SEQF1208.2|U00096.3_1_REPEAT12;Parent=SEQF1208.2|U00096.3_1;Note=CGGTTTATCCCCGCTGGCGCGGGGAACTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1208.2|U00096.3	CCTyper	binding_site	2878403	2878434	32	+	.	ID=SEQF1208.2|U00096.3_1_SPACER12;Parent=SEQF1208.2|U00096.3_1;Note=TGCGTGAGCGTATCGCCGCGCGTCTGCGAAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1208.2|U00096.3	CCTyper	direct_repeat	2878435	2878463	29	+	.	ID=SEQF1208.2|U00096.3_1_REPEAT13;Parent=SEQF1208.2|U00096.3_1;Note=CGGTTTATCCCCGCTGGCGCGGGGAACTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1208.2|U00096.3	CCTyper	repeat_region	2904014	2904407	394	+	.	ID=SEQF1208.2|U00096.3_2;Genome_ID=SEQF1208.2;Note=Predictor:CCtyper;Start:2904014;End:2904407;Consensus_Repeat:GGTTTATCCCCGCTGGCGCGGGGAACAC;Number_of_Repeats:7;Repeat_Length:28;Average_Spacer_Length:33.0;Repeat_Identity:98.0;Spacer_Identity:40.9;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: I-E;Cas_Subtype_Prediction:I-E;Subtype_Probability:1.0;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1208.2|U00096.3	CCTyper	direct_repeat	2904014	2904041	28	+	.	ID=SEQF1208.2|U00096.3_2_REPEAT1;Parent=SEQF1208.2|U00096.3_2;Note=GGTTTATCCCCGCTGGCGCGGGGAACTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1208.2|U00096.3	CCTyper	binding_site	2904042	2904074	33	+	.	ID=SEQF1208.2|U00096.3_2_SPACER1;Parent=SEQF1208.2|U00096.3_2;Note=GACAGAACGGCCTCAGTAGTCTCGTCAGGCTCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1208.2|U00096.3	CCTyper	direct_repeat	2904075	2904102	28	+	.	ID=SEQF1208.2|U00096.3_2_REPEAT2;Parent=SEQF1208.2|U00096.3_2;Note=GGTTTATCCCCGCTGGCGCGGGGAACAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1208.2|U00096.3	CCTyper	binding_site	2904103	2904135	33	+	.	ID=SEQF1208.2|U00096.3_2_SPACER2;Parent=SEQF1208.2|U00096.3_2;Note=CTGTTTTCGCAAATCTATGGACTATTGCTATTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1208.2|U00096.3	CCTyper	direct_repeat	2904136	2904163	28	+	.	ID=SEQF1208.2|U00096.3_2_REPEAT3;Parent=SEQF1208.2|U00096.3_2;Note=GGTTTATCCCCGCTGGCGCGGGGAACAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1208.2|U00096.3	CCTyper	binding_site	2904164	2904196	33	+	.	ID=SEQF1208.2|U00096.3_2_SPACER3;Parent=SEQF1208.2|U00096.3_2;Note=GGGCGCACGGAATACAAAGCCGTGTATCTGCTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1208.2|U00096.3	CCTyper	direct_repeat	2904197	2904224	28	+	.	ID=SEQF1208.2|U00096.3_2_REPEAT4;Parent=SEQF1208.2|U00096.3_2;Note=GGTTTATCCCCGCTGGCGCGGGGAACAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1208.2|U00096.3	CCTyper	binding_site	2904225	2904257	33	+	.	ID=SEQF1208.2|U00096.3_2_SPACER4;Parent=SEQF1208.2|U00096.3_2;Note=TGGCTCTGCAACAGCAGCACCCATGACCACGTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1208.2|U00096.3	CCTyper	direct_repeat	2904258	2904285	28	+	.	ID=SEQF1208.2|U00096.3_2_REPEAT5;Parent=SEQF1208.2|U00096.3_2;Note=GGTTTATCCCCGCTGGCGCGGGGAACAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1208.2|U00096.3	CCTyper	binding_site	2904286	2904318	33	+	.	ID=SEQF1208.2|U00096.3_2_SPACER5;Parent=SEQF1208.2|U00096.3_2;Note=GAAATGCTGGTGAGCGTTAATGCCGCAAACACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1208.2|U00096.3	CCTyper	direct_repeat	2904319	2904346	28	+	.	ID=SEQF1208.2|U00096.3_2_REPEAT6;Parent=SEQF1208.2|U00096.3_2;Note=GGTTTATCCCCGCTGGCGCGGGGAACAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1208.2|U00096.3	CCTyper	binding_site	2904347	2904379	33	+	.	ID=SEQF1208.2|U00096.3_2_SPACER6;Parent=SEQF1208.2|U00096.3_2;Note=ATTACGCCTTTTTGCGATTGCCCGGTTTTTGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1208.2|U00096.3	CCTyper	direct_repeat	2904380	2904407	28	+	.	ID=SEQF1208.2|U00096.3_2_REPEAT7;Parent=SEQF1208.2|U00096.3_2;Note=GGTTTATCCCCGCTGGCGCGGGGAACAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1208.2|U00096.3	CCTyper	OPERON	2875421	2888312	12892	-	.	ID=SEQF1208.2|U00096.3@38;Genome_ID=SEQF1208.2;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-E;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=I-E;Best_score=28.0;Genes=CysH_0_IVB,Cas2_1_CAS-I-II-III-IV-V-VI,Cas1_0_IE,Cas6_0_IE,Cas5_0_IE,Cas7_0_CAS-I-E,Cse2gr11_0_CAS-I-E,Cse1_0_IE,Cas3_1_CAS-I,CysH_0_IVB;Positions=2704,2706,2707,2708,2709,2710,2711,2712,2713,2714;E-values=1.50e-19,6.40e-44,4.70e-114,3.30e-81,8.20e-87,1.00e-129,1.90e-37,3.80e-163,1.80e-163,6.40e-17;CoverageSeq=0.571,0.958,0.866,0.995,0.951,0.882,0.907,0.984,0.867,0.743;CoverageHMM=0.683,1.0,0.989,1.0,1.0,1.0,0.994,1.0,0.999,0.719;Strand_Interference=-1;Strand_Adaptation=-1
SEQF1208.2|U00096.3	CCTyper	CDS	2878855	2879772	306	-	.	ID=SEQF1208.2|U00096.3_2707_cas;Genome_ID=SEQF1208.2;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IE;coding_strand=-;E-value=4.7e-114;Score=378.1;Coverage_Seq=0.8660130718954249;Coverage_Hmm=0.9888475836431226
SEQF1208.2|U00096.3	CCTyper	CDS	2878569	2878853	95	-	.	ID=SEQF1208.2|U00096.3_2706_cas;Genome_ID=SEQF1208.2;Feature_type=CDS;Product=Cas Prediction : Cas2_1_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=6.400000000000001e-44;Score=146.0;Coverage_Seq=0.9578947368421052;Coverage_Hmm=1.0
SEQF1208.2|U00096.3	CCTyper	CDS	2884553	2887219	889	-	.	ID=SEQF1208.2|U00096.3_2713_cas;Genome_ID=SEQF1208.2;Feature_type=CDS;Product=Cas Prediction : Cas3_1_CAS-I;coding_strand=-;E-value=1.8e-163;Score=543.6;Coverage_Seq=0.8672665916760405;Coverage_Hmm=0.9986577181208054
SEQF1208.2|U00096.3	CCTyper	CDS	2880374	2881048	225	-	.	ID=SEQF1208.2|U00096.3_2709_cas;Genome_ID=SEQF1208.2;Feature_type=CDS;Product=Cas Prediction : Cas5_0_IE;coding_strand=-;E-value=8.2e-87;Score=288.6;Coverage_Seq=0.9511111111111111;Coverage_Hmm=1.0
SEQF1208.2|U00096.3	CCTyper	CDS	2879788	2880387	200	-	.	ID=SEQF1208.2|U00096.3_2708_cas;Genome_ID=SEQF1208.2;Feature_type=CDS;Product=Cas Prediction : Cas6_0_IE;coding_strand=-;E-value=3.3000000000000003e-81;Score=270.5;Coverage_Seq=0.995;Coverage_Hmm=1.0
SEQF1208.2|U00096.3	CCTyper	CDS	2881051	2882142	364	-	.	ID=SEQF1208.2|U00096.3_2710_cas;Genome_ID=SEQF1208.2;Feature_type=CDS;Product=Cas Prediction : Cas7_0_CAS-I-E;coding_strand=-;E-value=1e-129;Score=431.1;Coverage_Seq=0.8818681318681318;Coverage_Hmm=1.0
SEQF1208.2|U00096.3	CCTyper	CDS	2882630	2884138	503	-	.	ID=SEQF1208.2|U00096.3_2712_cas;Genome_ID=SEQF1208.2;Feature_type=CDS;Product=Cas Prediction : Cse1_0_IE;coding_strand=-;E-value=3.8e-163;Score=541.9;Coverage_Seq=0.9840954274353877;Coverage_Hmm=1.0
SEQF1208.2|U00096.3	CCTyper	CDS	2882155	2882637	161	-	.	ID=SEQF1208.2|U00096.3_2711_cas;Genome_ID=SEQF1208.2;Feature_type=CDS;Product=Cas Prediction : Cse2gr11_0_CAS-I-E;coding_strand=-;E-value=1.9e-37;Score=126.9;Coverage_Seq=0.906832298136646;Coverage_Hmm=0.99375
SEQF1208.2|U00096.3	CCTyper	CDS	2875421	2876329	303	-	.	ID=SEQF1208.2|U00096.3_2704_cas;Genome_ID=SEQF1208.2;Feature_type=CDS;Product=Cas Prediction : CysH_0_IVB;coding_strand=-;E-value=1.5e-19;Score=68.6;Coverage_Seq=0.570957095709571;Coverage_Hmm=0.6827309236947792
SEQF1208.2|U00096.3	CCTyper	CDS	2887578	2888312	245	-	.	ID=SEQF1208.2|U00096.3_2714_cas;Genome_ID=SEQF1208.2;Feature_type=CDS;Product=Cas Prediction : CysH_0_IVB;coding_strand=-;E-value=6.4e-17;Score=60.0;Coverage_Seq=0.7428571428571429;Coverage_Hmm=0.7188755020080321