SEQF1259.1|CP000233.1	CCTyper	repeat_region	120840	122657	1818	+	.	ID=SEQF1259.1|CP000233.1_1;Genome_ID=SEQF1259.1;Note=Predictor:CCtyper;Start:120840;End:122657;Consensus_Repeat:GTTTCAGAAGTATGTTAAATCAATAAGGTTAAGACC;Number_of_Repeats:28;Repeat_Length:36;Average_Spacer_Length:30;Repeat_Identity:93.5;Spacer_Identity:42.9;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.972;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1259.1|CP000233.1	CCTyper	direct_repeat	120840	120875	36	+	.	ID=SEQF1259.1|CP000233.1_1_REPEAT1;Parent=SEQF1259.1|CP000233.1_1;Note=GTTTCAGAAGTATGTTAAATCAATAAGGTTAAGACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1259.1|CP000233.1	CCTyper	binding_site	120876	120905	30	+	.	ID=SEQF1259.1|CP000233.1_1_SPACER1;Parent=SEQF1259.1|CP000233.1_1;Note=TATTTGTGGAGGTTATGATATTTGGATCAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1259.1|CP000233.1	CCTyper	direct_repeat	120906	120941	36	+	.	ID=SEQF1259.1|CP000233.1_1_REPEAT2;Parent=SEQF1259.1|CP000233.1_1;Note=GTTTCAGAAGTATGTTAAATCAATAAGGTTAAGACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1259.1|CP000233.1	CCTyper	binding_site	120942	120971	30	+	.	ID=SEQF1259.1|CP000233.1_1_SPACER2;Parent=SEQF1259.1|CP000233.1_1;Note=TATCTATCGTATTTATCCGCCTTAGGTTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1259.1|CP000233.1	CCTyper	direct_repeat	120972	121007	36	+	.	ID=SEQF1259.1|CP000233.1_1_REPEAT3;Parent=SEQF1259.1|CP000233.1_1;Note=GTTTCAGAAGTATGTTAAATCAATAAGGTTAAGACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1259.1|CP000233.1	CCTyper	binding_site	121008	121037	30	+	.	ID=SEQF1259.1|CP000233.1_1_SPACER3;Parent=SEQF1259.1|CP000233.1_1;Note=CTGCGATACTGTATATACCTTGAGCAACTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1259.1|CP000233.1	CCTyper	direct_repeat	121038	121073	36	+	.	ID=SEQF1259.1|CP000233.1_1_REPEAT4;Parent=SEQF1259.1|CP000233.1_1;Note=GTTTCAGAAGTATGTTAAATCAATAAGGTTAAGACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1259.1|CP000233.1	CCTyper	binding_site	121074	121103	30	+	.	ID=SEQF1259.1|CP000233.1_1_SPACER4;Parent=SEQF1259.1|CP000233.1_1;Note=AGAAAGCCAAATGAATAGTGGTTGGAATAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1259.1|CP000233.1	CCTyper	direct_repeat	121104	121139	36	+	.	ID=SEQF1259.1|CP000233.1_1_REPEAT5;Parent=SEQF1259.1|CP000233.1_1;Note=GTTTCAGAAGTATGTTAAATCAATAAGGTTAAGACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1259.1|CP000233.1	CCTyper	binding_site	121140	121169	30	+	.	ID=SEQF1259.1|CP000233.1_1_SPACER5;Parent=SEQF1259.1|CP000233.1_1;Note=TCTGATAGCCAGAGAAATGAATATTGTAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1259.1|CP000233.1	CCTyper	direct_repeat	121170	121205	36	+	.	ID=SEQF1259.1|CP000233.1_1_REPEAT6;Parent=SEQF1259.1|CP000233.1_1;Note=GTTTCAGAAGTATGTTAAATCAATAAGGTTAAGACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1259.1|CP000233.1	CCTyper	binding_site	121206	121235	30	+	.	ID=SEQF1259.1|CP000233.1_1_SPACER6;Parent=SEQF1259.1|CP000233.1_1;Note=ACGTTTGACTAACGTAAGCAAAGTTAAAGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1259.1|CP000233.1	CCTyper	direct_repeat	121236	121271	36	+	.	ID=SEQF1259.1|CP000233.1_1_REPEAT7;Parent=SEQF1259.1|CP000233.1_1;Note=GTTTCAGAAGTATGTTAAATCAATAAGGTTAAGACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1259.1|CP000233.1	CCTyper	binding_site	121272	121301	30	+	.	ID=SEQF1259.1|CP000233.1_1_SPACER7;Parent=SEQF1259.1|CP000233.1_1;Note=AGTAATGAATAGTTAAGTATAAGCGTTTAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1259.1|CP000233.1	CCTyper	direct_repeat	121302	121337	36	+	.	ID=SEQF1259.1|CP000233.1_1_REPEAT8;Parent=SEQF1259.1|CP000233.1_1;Note=GTTTCAGAAGTATGTTAAATCAATAAGGTTAAGACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1259.1|CP000233.1	CCTyper	binding_site	121338	121367	30	+	.	ID=SEQF1259.1|CP000233.1_1_SPACER8;Parent=SEQF1259.1|CP000233.1_1;Note=TAAGCCCGTTAATAGTGGTGATACACAGCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1259.1|CP000233.1	CCTyper	direct_repeat	121368	121403	36	+	.	ID=SEQF1259.1|CP000233.1_1_REPEAT9;Parent=SEQF1259.1|CP000233.1_1;Note=GTTTCAGAAGTATGTTAAATCAATAAGGTTAAGACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1259.1|CP000233.1	CCTyper	binding_site	121404	121433	30	+	.	ID=SEQF1259.1|CP000233.1_1_SPACER9;Parent=SEQF1259.1|CP000233.1_1;Note=TTATCTCTATGAAGAAATTCAAGCTATTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1259.1|CP000233.1	CCTyper	direct_repeat	121434	121469	36	+	.	ID=SEQF1259.1|CP000233.1_1_REPEAT10;Parent=SEQF1259.1|CP000233.1_1;Note=GTTTCAGAAGTATGTTAAATCAATAAGGTTAAGACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1259.1|CP000233.1	CCTyper	binding_site	121470	121499	30	+	.	ID=SEQF1259.1|CP000233.1_1_SPACER10;Parent=SEQF1259.1|CP000233.1_1;Note=TGGGTCAATTAACTACAATGTTATGACTAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1259.1|CP000233.1	CCTyper	direct_repeat	121500	121535	36	+	.	ID=SEQF1259.1|CP000233.1_1_REPEAT11;Parent=SEQF1259.1|CP000233.1_1;Note=GTTTCAGAAGTATGTTAAATCAATAAGGTTAAGACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1259.1|CP000233.1	CCTyper	binding_site	121536	121565	30	+	.	ID=SEQF1259.1|CP000233.1_1_SPACER11;Parent=SEQF1259.1|CP000233.1_1;Note=TTCACAAAAAGCTATCAAAGAGACTACTGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1259.1|CP000233.1	CCTyper	direct_repeat	121566	121601	36	+	.	ID=SEQF1259.1|CP000233.1_1_REPEAT12;Parent=SEQF1259.1|CP000233.1_1;Note=GTTTCAGAAGTATGTTAAATCAATAAGGTTAAGACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1259.1|CP000233.1	CCTyper	binding_site	121602	121631	30	+	.	ID=SEQF1259.1|CP000233.1_1_SPACER12;Parent=SEQF1259.1|CP000233.1_1;Note=TAACCGCTAATGTTAGATATGACGAAAGAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1259.1|CP000233.1	CCTyper	direct_repeat	121632	121667	36	+	.	ID=SEQF1259.1|CP000233.1_1_REPEAT13;Parent=SEQF1259.1|CP000233.1_1;Note=GTTTCAGAAGTATGTTAAATCAATAAGGTTAAGACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1259.1|CP000233.1	CCTyper	binding_site	121668	121697	30	+	.	ID=SEQF1259.1|CP000233.1_1_SPACER13;Parent=SEQF1259.1|CP000233.1_1;Note=TTAAAGCAGTTGGCAAGGTTGGAGATGCAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1259.1|CP000233.1	CCTyper	direct_repeat	121698	121733	36	+	.	ID=SEQF1259.1|CP000233.1_1_REPEAT14;Parent=SEQF1259.1|CP000233.1_1;Note=GTTTCAGAAGTATGTTAAATCAATAAGGTTAAGACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1259.1|CP000233.1	CCTyper	binding_site	121734	121763	30	+	.	ID=SEQF1259.1|CP000233.1_1_SPACER14;Parent=SEQF1259.1|CP000233.1_1;Note=GAAGTTTTACATTATGAAGCCCAAGCAAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1259.1|CP000233.1	CCTyper	direct_repeat	121764	121799	36	+	.	ID=SEQF1259.1|CP000233.1_1_REPEAT15;Parent=SEQF1259.1|CP000233.1_1;Note=GTTTCAGAAGTATGTTAAATCAATAAGGTTAAGACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1259.1|CP000233.1	CCTyper	binding_site	121800	121829	30	+	.	ID=SEQF1259.1|CP000233.1_1_SPACER15;Parent=SEQF1259.1|CP000233.1_1;Note=AGCGTATGTTGACGCTTATGATGGTTGGTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1259.1|CP000233.1	CCTyper	direct_repeat	121830	121865	36	+	.	ID=SEQF1259.1|CP000233.1_1_REPEAT16;Parent=SEQF1259.1|CP000233.1_1;Note=GTTTCAGAAGTATGTTAAATCAATAAGGTTAAGACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1259.1|CP000233.1	CCTyper	binding_site	121866	121895	30	+	.	ID=SEQF1259.1|CP000233.1_1_SPACER16;Parent=SEQF1259.1|CP000233.1_1;Note=AAAATTATATTATAAGGAGTGCGGTTTTGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1259.1|CP000233.1	CCTyper	direct_repeat	121896	121931	36	+	.	ID=SEQF1259.1|CP000233.1_1_REPEAT17;Parent=SEQF1259.1|CP000233.1_1;Note=GTTTCAGAAGTATGTTAAATCAATAAGGTTAAGACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1259.1|CP000233.1	CCTyper	binding_site	121932	121961	30	+	.	ID=SEQF1259.1|CP000233.1_1_SPACER17;Parent=SEQF1259.1|CP000233.1_1;Note=AAGGCGGTGAGATTAGTTGCAATGGCTAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1259.1|CP000233.1	CCTyper	direct_repeat	121962	121997	36	+	.	ID=SEQF1259.1|CP000233.1_1_REPEAT18;Parent=SEQF1259.1|CP000233.1_1;Note=GTTTCAGAAGTATGTTAAATCAATAAGGTTAAGACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1259.1|CP000233.1	CCTyper	binding_site	121998	122027	30	+	.	ID=SEQF1259.1|CP000233.1_1_SPACER18;Parent=SEQF1259.1|CP000233.1_1;Note=ACGGTATTAGTGGATCTAGTTCCGCTGGTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1259.1|CP000233.1	CCTyper	direct_repeat	122028	122063	36	+	.	ID=SEQF1259.1|CP000233.1_1_REPEAT19;Parent=SEQF1259.1|CP000233.1_1;Note=GTTTCAGAAGTATGTTAAATCAATAAGGTTAAGACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1259.1|CP000233.1	CCTyper	binding_site	122064	122093	30	+	.	ID=SEQF1259.1|CP000233.1_1_SPACER19;Parent=SEQF1259.1|CP000233.1_1;Note=AAAGGGCTTGAGAAACAAGTTTGGTCAGAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1259.1|CP000233.1	CCTyper	direct_repeat	122094	122129	36	+	.	ID=SEQF1259.1|CP000233.1_1_REPEAT20;Parent=SEQF1259.1|CP000233.1_1;Note=GTTTCAGAAGTATGTTAAATCAATAAGGTTAAGACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1259.1|CP000233.1	CCTyper	binding_site	122130	122159	30	+	.	ID=SEQF1259.1|CP000233.1_1_SPACER20;Parent=SEQF1259.1|CP000233.1_1;Note=ACAGCAATTTATAAGTTATCTCGCGATTGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1259.1|CP000233.1	CCTyper	direct_repeat	122160	122195	36	+	.	ID=SEQF1259.1|CP000233.1_1_REPEAT21;Parent=SEQF1259.1|CP000233.1_1;Note=GTTTCAGAAGTATGTTAAATCAATAAGGTTAAGACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1259.1|CP000233.1	CCTyper	binding_site	122196	122225	30	+	.	ID=SEQF1259.1|CP000233.1_1_SPACER21;Parent=SEQF1259.1|CP000233.1_1;Note=CAATTCACACCGCAGTTCAATCAGCTTACG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1259.1|CP000233.1	CCTyper	direct_repeat	122226	122261	36	+	.	ID=SEQF1259.1|CP000233.1_1_REPEAT22;Parent=SEQF1259.1|CP000233.1_1;Note=GTTTCAGAAGTATGTTAAATCAATAAGGTTAAGACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1259.1|CP000233.1	CCTyper	binding_site	122262	122291	30	+	.	ID=SEQF1259.1|CP000233.1_1_SPACER22;Parent=SEQF1259.1|CP000233.1_1;Note=TGCTTTACCTTTTAATGTGTCTTTAAGCGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1259.1|CP000233.1	CCTyper	direct_repeat	122292	122327	36	+	.	ID=SEQF1259.1|CP000233.1_1_REPEAT23;Parent=SEQF1259.1|CP000233.1_1;Note=GTTTCAGAAGTATGTTAAATCAATAAGGTTAAGACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1259.1|CP000233.1	CCTyper	binding_site	122328	122357	30	+	.	ID=SEQF1259.1|CP000233.1_1_SPACER23;Parent=SEQF1259.1|CP000233.1_1;Note=AGAAATCACATACAAGCTGCTATATGTTGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1259.1|CP000233.1	CCTyper	direct_repeat	122358	122393	36	+	.	ID=SEQF1259.1|CP000233.1_1_REPEAT24;Parent=SEQF1259.1|CP000233.1_1;Note=GTTTCAGAAGTATGTTAAATCAATAAGGTTAAGACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1259.1|CP000233.1	CCTyper	binding_site	122394	122423	30	+	.	ID=SEQF1259.1|CP000233.1_1_SPACER24;Parent=SEQF1259.1|CP000233.1_1;Note=TAACGTTGTAGCGTTTCTATACCGGCCAGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1259.1|CP000233.1	CCTyper	direct_repeat	122424	122459	36	+	.	ID=SEQF1259.1|CP000233.1_1_REPEAT25;Parent=SEQF1259.1|CP000233.1_1;Note=GTTTCAGAAGTATGTTAAATCAATAAGGTTAAGACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1259.1|CP000233.1	CCTyper	binding_site	122460	122489	30	+	.	ID=SEQF1259.1|CP000233.1_1_SPACER25;Parent=SEQF1259.1|CP000233.1_1;Note=CAGATTCCATAATCTTTATCTACGTTCTCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1259.1|CP000233.1	CCTyper	direct_repeat	122490	122525	36	+	.	ID=SEQF1259.1|CP000233.1_1_REPEAT26;Parent=SEQF1259.1|CP000233.1_1;Note=GTTTCAGAAGTATGTTAAATCAATAAGGTTAAGACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1259.1|CP000233.1	CCTyper	binding_site	122526	122555	30	+	.	ID=SEQF1259.1|CP000233.1_1_SPACER26;Parent=SEQF1259.1|CP000233.1_1;Note=AAATTGATATTTTAACACGCTACCACCATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1259.1|CP000233.1	CCTyper	direct_repeat	122556	122591	36	+	.	ID=SEQF1259.1|CP000233.1_1_REPEAT27;Parent=SEQF1259.1|CP000233.1_1;Note=GTTTCAGAAGTATGTTAAATCAATAAGGTTAAGAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1259.1|CP000233.1	CCTyper	binding_site	122592	122621	30	+	.	ID=SEQF1259.1|CP000233.1_1_SPACER27;Parent=SEQF1259.1|CP000233.1_1;Note=GGTTCTGAGCCTAGTTAGAATGACATAGGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1259.1|CP000233.1	CCTyper	direct_repeat	122622	122657	36	+	.	ID=SEQF1259.1|CP000233.1_1_REPEAT28;Parent=SEQF1259.1|CP000233.1_1;Note=GTTTCAGAAGAATATTAAATTAATTAGATTAATATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1259.1|CP000233.1	CCTyper	OPERON	114740	123261	8522	+	.	ID=SEQF1259.1|CP000233.1@4;Genome_ID=SEQF1259.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Cas9_0_II,Cas1_4_CAS-I-II-III-IV-V-VI,Cas2_9_CAS-I-II-III-IV-V-VI,Csn2_3_CAS-II-A,Csa3_1_CAS-I-II-III-IV-V-VI;Positions=104,106,107,108,109;E-values=3.80e-171,8.10e-95,5.90e-55,3.70e-80,1.40e-04;CoverageSeq=0.877,0.889,0.99,0.987,0.458;CoverageHMM=0.975,0.982,1.0,1.0,0.407;Strand_Interference=1;Strand_Adaptation=1
SEQF1259.1|CP000233.1	CCTyper	CDS	118967	119857	297	+	.	ID=SEQF1259.1|CP000233.1_106_cas;Genome_ID=SEQF1259.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=8.099999999999999e-95;Score=314.0;Coverage_Seq=0.8888888888888888;Coverage_Hmm=0.9818181818181818
SEQF1259.1|CP000233.1	CCTyper	CDS	119835	120140	102	+	.	ID=SEQF1259.1|CP000233.1_107_cas;Genome_ID=SEQF1259.1;Feature_type=CDS;Product=Cas Prediction : Cas2_9_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=5.9e-55;Score=180.7;Coverage_Seq=0.9901960784313726;Coverage_Hmm=1.0
SEQF1259.1|CP000233.1	CCTyper	CDS	114740	118189	1150	+	.	ID=SEQF1259.1|CP000233.1_104_cas;Genome_ID=SEQF1259.1;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=+;E-value=3.7999999999999998e-171;Score=568.2;Coverage_Seq=0.8773913043478261;Coverage_Hmm=0.9746987951807229
SEQF1259.1|CP000233.1	CCTyper	CDS	122941	123261	107	+	.	ID=SEQF1259.1|CP000233.1_109_cas;Genome_ID=SEQF1259.1;Feature_type=CDS;Product=Cas Prediction : Csa3_1_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=0.00014;Score=19.2;Coverage_Seq=0.45794392523364486;Coverage_Hmm=0.4067796610169492
SEQF1259.1|CP000233.1	CCTyper	CDS	120137	120808	224	+	.	ID=SEQF1259.1|CP000233.1_108_cas;Genome_ID=SEQF1259.1;Feature_type=CDS;Product=Cas Prediction : Csn2_3_CAS-II-A;coding_strand=+;E-value=3.7e-80;Score=265.6;Coverage_Seq=0.9866071428571429;Coverage_Hmm=1.0