SEQF1332.1|AE009948.1	CCTyper	repeat_region	908164	909849	1686	+	.	ID=SEQF1332.1|AE009948.1_1;Genome_ID=SEQF1332.1;Note=Predictor:CCtyper;Start:908164;End:909849;Consensus_Repeat:GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC;Number_of_Repeats:26;Repeat_Length:36;Average_Spacer_Length:30;Repeat_Identity:100.0;Spacer_Identity:43.2;Spacer_Length_Sem:0.1;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.798;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1332.1|AE009948.1	CCTyper	direct_repeat	908164	908199	36	+	.	ID=SEQF1332.1|AE009948.1_1_REPEAT1;Parent=SEQF1332.1|AE009948.1_1;Note=GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1332.1|AE009948.1	CCTyper	binding_site	908200	908229	30	+	.	ID=SEQF1332.1|AE009948.1_1_SPACER1;Parent=SEQF1332.1|AE009948.1_1;Note=TAATTGCCAATGCTTACAATATCTTCGTCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1332.1|AE009948.1	CCTyper	direct_repeat	908230	908265	36	+	.	ID=SEQF1332.1|AE009948.1_1_REPEAT2;Parent=SEQF1332.1|AE009948.1_1;Note=GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1332.1|AE009948.1	CCTyper	binding_site	908266	908295	30	+	.	ID=SEQF1332.1|AE009948.1_1_SPACER2;Parent=SEQF1332.1|AE009948.1_1;Note=ATGTTCTGAATTACCTTTCTCGACACTCCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1332.1|AE009948.1	CCTyper	direct_repeat	908296	908331	36	+	.	ID=SEQF1332.1|AE009948.1_1_REPEAT3;Parent=SEQF1332.1|AE009948.1_1;Note=GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1332.1|AE009948.1	CCTyper	binding_site	908332	908361	30	+	.	ID=SEQF1332.1|AE009948.1_1_SPACER3;Parent=SEQF1332.1|AE009948.1_1;Note=ACCATCAAGGCTCTTATCTGCAGATTGTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1332.1|AE009948.1	CCTyper	direct_repeat	908362	908397	36	+	.	ID=SEQF1332.1|AE009948.1_1_REPEAT4;Parent=SEQF1332.1|AE009948.1_1;Note=GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1332.1|AE009948.1	CCTyper	binding_site	908398	908427	30	+	.	ID=SEQF1332.1|AE009948.1_1_SPACER4;Parent=SEQF1332.1|AE009948.1_1;Note=AAATGGTTGCCAATGACTTTCTAGAGTGAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1332.1|AE009948.1	CCTyper	direct_repeat	908428	908463	36	+	.	ID=SEQF1332.1|AE009948.1_1_REPEAT5;Parent=SEQF1332.1|AE009948.1_1;Note=GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1332.1|AE009948.1	CCTyper	binding_site	908464	908493	30	+	.	ID=SEQF1332.1|AE009948.1_1_SPACER5;Parent=SEQF1332.1|AE009948.1_1;Note=ACAAAATCTTTTGTTGCTCCTGGACGTATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1332.1|AE009948.1	CCTyper	direct_repeat	908494	908529	36	+	.	ID=SEQF1332.1|AE009948.1_1_REPEAT6;Parent=SEQF1332.1|AE009948.1_1;Note=GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1332.1|AE009948.1	CCTyper	binding_site	908530	908559	30	+	.	ID=SEQF1332.1|AE009948.1_1_SPACER6;Parent=SEQF1332.1|AE009948.1_1;Note=ATGTAAGGTATTGTAAAACTTCTTCTTGCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1332.1|AE009948.1	CCTyper	direct_repeat	908560	908595	36	+	.	ID=SEQF1332.1|AE009948.1_1_REPEAT7;Parent=SEQF1332.1|AE009948.1_1;Note=GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1332.1|AE009948.1	CCTyper	binding_site	908596	908625	30	+	.	ID=SEQF1332.1|AE009948.1_1_SPACER7;Parent=SEQF1332.1|AE009948.1_1;Note=ACTGTTCCTATAATTAAAATAAAAGAGGTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1332.1|AE009948.1	CCTyper	direct_repeat	908626	908661	36	+	.	ID=SEQF1332.1|AE009948.1_1_REPEAT8;Parent=SEQF1332.1|AE009948.1_1;Note=GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1332.1|AE009948.1	CCTyper	binding_site	908662	908691	30	+	.	ID=SEQF1332.1|AE009948.1_1_SPACER8;Parent=SEQF1332.1|AE009948.1_1;Note=TGTTCCAGTAAAAAGTAATTTTAAAGCATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1332.1|AE009948.1	CCTyper	direct_repeat	908692	908727	36	+	.	ID=SEQF1332.1|AE009948.1_1_REPEAT9;Parent=SEQF1332.1|AE009948.1_1;Note=GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1332.1|AE009948.1	CCTyper	binding_site	908728	908757	30	+	.	ID=SEQF1332.1|AE009948.1_1_SPACER9;Parent=SEQF1332.1|AE009948.1_1;Note=CGCTCGATTGATGCTATCAACTATATTGAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1332.1|AE009948.1	CCTyper	direct_repeat	908758	908793	36	+	.	ID=SEQF1332.1|AE009948.1_1_REPEAT10;Parent=SEQF1332.1|AE009948.1_1;Note=GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1332.1|AE009948.1	CCTyper	binding_site	908794	908823	30	+	.	ID=SEQF1332.1|AE009948.1_1_SPACER10;Parent=SEQF1332.1|AE009948.1_1;Note=TTCTTCAAGAGAACTTGTAGAACAGCTTCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1332.1|AE009948.1	CCTyper	direct_repeat	908824	908859	36	+	.	ID=SEQF1332.1|AE009948.1_1_REPEAT11;Parent=SEQF1332.1|AE009948.1_1;Note=GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1332.1|AE009948.1	CCTyper	binding_site	908860	908889	30	+	.	ID=SEQF1332.1|AE009948.1_1_SPACER11;Parent=SEQF1332.1|AE009948.1_1;Note=AAGGTACTTTTAGCTTGTTCTTGTGGTGTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1332.1|AE009948.1	CCTyper	direct_repeat	908890	908925	36	+	.	ID=SEQF1332.1|AE009948.1_1_REPEAT12;Parent=SEQF1332.1|AE009948.1_1;Note=GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1332.1|AE009948.1	CCTyper	binding_site	908926	908955	30	+	.	ID=SEQF1332.1|AE009948.1_1_SPACER12;Parent=SEQF1332.1|AE009948.1_1;Note=ACAGCTACTGTAAATTCTGCTTTTACGGTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1332.1|AE009948.1	CCTyper	direct_repeat	908956	908991	36	+	.	ID=SEQF1332.1|AE009948.1_1_REPEAT13;Parent=SEQF1332.1|AE009948.1_1;Note=GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1332.1|AE009948.1	CCTyper	binding_site	908992	909021	30	+	.	ID=SEQF1332.1|AE009948.1_1_SPACER13;Parent=SEQF1332.1|AE009948.1_1;Note=TAGTGCAGTTGTCAAGGAGATTGTGAGCGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1332.1|AE009948.1	CCTyper	direct_repeat	909022	909057	36	+	.	ID=SEQF1332.1|AE009948.1_1_REPEAT14;Parent=SEQF1332.1|AE009948.1_1;Note=GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1332.1|AE009948.1	CCTyper	binding_site	909058	909087	30	+	.	ID=SEQF1332.1|AE009948.1_1_SPACER14;Parent=SEQF1332.1|AE009948.1_1;Note=TTTAACCTTTGAAAATGTGAAAGGCTCGTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1332.1|AE009948.1	CCTyper	direct_repeat	909088	909123	36	+	.	ID=SEQF1332.1|AE009948.1_1_REPEAT15;Parent=SEQF1332.1|AE009948.1_1;Note=GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1332.1|AE009948.1	CCTyper	binding_site	909124	909153	30	+	.	ID=SEQF1332.1|AE009948.1_1_SPACER15;Parent=SEQF1332.1|AE009948.1_1;Note=GCGATGATGGTAAGTCATCATGGACAGCGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1332.1|AE009948.1	CCTyper	direct_repeat	909154	909189	36	+	.	ID=SEQF1332.1|AE009948.1_1_REPEAT16;Parent=SEQF1332.1|AE009948.1_1;Note=GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1332.1|AE009948.1	CCTyper	binding_site	909190	909219	30	+	.	ID=SEQF1332.1|AE009948.1_1_SPACER16;Parent=SEQF1332.1|AE009948.1_1;Note=TTTTACACACGATGTCAGATATAATGTCAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1332.1|AE009948.1	CCTyper	direct_repeat	909220	909255	36	+	.	ID=SEQF1332.1|AE009948.1_1_REPEAT17;Parent=SEQF1332.1|AE009948.1_1;Note=GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1332.1|AE009948.1	CCTyper	binding_site	909256	909285	30	+	.	ID=SEQF1332.1|AE009948.1_1_SPACER17;Parent=SEQF1332.1|AE009948.1_1;Note=AGTACTGCACTAGGAATTGTAGAGATCAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1332.1|AE009948.1	CCTyper	direct_repeat	909286	909321	36	+	.	ID=SEQF1332.1|AE009948.1_1_REPEAT18;Parent=SEQF1332.1|AE009948.1_1;Note=GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1332.1|AE009948.1	CCTyper	binding_site	909322	909351	30	+	.	ID=SEQF1332.1|AE009948.1_1_SPACER18;Parent=SEQF1332.1|AE009948.1_1;Note=CGTACCATCTATCAATTTACCGCAAGCTGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1332.1|AE009948.1	CCTyper	direct_repeat	909352	909387	36	+	.	ID=SEQF1332.1|AE009948.1_1_REPEAT19;Parent=SEQF1332.1|AE009948.1_1;Note=GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1332.1|AE009948.1	CCTyper	binding_site	909388	909417	30	+	.	ID=SEQF1332.1|AE009948.1_1_SPACER19;Parent=SEQF1332.1|AE009948.1_1;Note=TTAAAAGATTTAAACTATCAAGCGTCAATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1332.1|AE009948.1	CCTyper	direct_repeat	909418	909453	36	+	.	ID=SEQF1332.1|AE009948.1_1_REPEAT20;Parent=SEQF1332.1|AE009948.1_1;Note=GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1332.1|AE009948.1	CCTyper	binding_site	909454	909483	30	+	.	ID=SEQF1332.1|AE009948.1_1_SPACER20;Parent=SEQF1332.1|AE009948.1_1;Note=TTCTAAATGCTGGTGACTGCTTTGCATAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1332.1|AE009948.1	CCTyper	direct_repeat	909484	909519	36	+	.	ID=SEQF1332.1|AE009948.1_1_REPEAT21;Parent=SEQF1332.1|AE009948.1_1;Note=GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1332.1|AE009948.1	CCTyper	binding_site	909520	909550	31	+	.	ID=SEQF1332.1|AE009948.1_1_SPACER21;Parent=SEQF1332.1|AE009948.1_1;Note=TTGCTGCTAGACCCAAACAGTTTATTTTTAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1332.1|AE009948.1	CCTyper	direct_repeat	909551	909586	36	+	.	ID=SEQF1332.1|AE009948.1_1_REPEAT22;Parent=SEQF1332.1|AE009948.1_1;Note=GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1332.1|AE009948.1	CCTyper	binding_site	909587	909616	30	+	.	ID=SEQF1332.1|AE009948.1_1_SPACER22;Parent=SEQF1332.1|AE009948.1_1;Note=TCCTTTTTTAGATAATGTGCGATCACGGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1332.1|AE009948.1	CCTyper	direct_repeat	909617	909652	36	+	.	ID=SEQF1332.1|AE009948.1_1_REPEAT23;Parent=SEQF1332.1|AE009948.1_1;Note=GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1332.1|AE009948.1	CCTyper	binding_site	909653	909681	29	+	.	ID=SEQF1332.1|AE009948.1_1_SPACER23;Parent=SEQF1332.1|AE009948.1_1;Note=TTTTACCAATGCTTCCATATCGCTTATAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1332.1|AE009948.1	CCTyper	direct_repeat	909682	909717	36	+	.	ID=SEQF1332.1|AE009948.1_1_REPEAT24;Parent=SEQF1332.1|AE009948.1_1;Note=GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1332.1|AE009948.1	CCTyper	binding_site	909718	909747	30	+	.	ID=SEQF1332.1|AE009948.1_1_SPACER24;Parent=SEQF1332.1|AE009948.1_1;Note=TGGTTATACATTTACTAATCCATCAGCATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1332.1|AE009948.1	CCTyper	direct_repeat	909748	909783	36	+	.	ID=SEQF1332.1|AE009948.1_1_REPEAT25;Parent=SEQF1332.1|AE009948.1_1;Note=GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1332.1|AE009948.1	CCTyper	binding_site	909784	909813	30	+	.	ID=SEQF1332.1|AE009948.1_1_SPACER25;Parent=SEQF1332.1|AE009948.1_1;Note=AAGCTAATTCTCATCTCACCGAGATGGATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1332.1|AE009948.1	CCTyper	direct_repeat	909814	909849	36	+	.	ID=SEQF1332.1|AE009948.1_1_REPEAT26;Parent=SEQF1332.1|AE009948.1_1;Note=GTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1332.1|AE009948.1	CCTyper	OPERON	902090	908063	5974	+	.	ID=SEQF1332.1|AE009948.1@19;Genome_ID=SEQF1332.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Cas9_1_II,Cas1_4_CAS-I-II-III-IV-V-VI,Cas2_5_CAS-I-II-III-IV-V-VI,Csn2_1_CAS-II-A;Positions=874,875,876,877;E-values=0.00e+00,6.20e-108,1.60e-52,3.70e-107;CoverageSeq=0.995,0.928,0.982,0.977;CoverageHMM=0.998,0.996,0.991,0.995;Strand_Interference=1;Strand_Adaptation=1
SEQF1332.1|AE009948.1	CCTyper	CDS	906204	907073	290	+	.	ID=SEQF1332.1|AE009948.1_875_cas;Genome_ID=SEQF1332.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=6.2e-108;Score=357.1;Coverage_Seq=0.9275862068965517;Coverage_Hmm=0.9963636363636363
SEQF1332.1|AE009948.1	CCTyper	CDS	907070	907411	114	+	.	ID=SEQF1332.1|AE009948.1_876_cas;Genome_ID=SEQF1332.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.6e-52;Score=173.6;Coverage_Seq=0.9824561403508771;Coverage_Hmm=0.9913793103448276
SEQF1332.1|AE009948.1	CCTyper	CDS	902090	906202	1371	+	.	ID=SEQF1332.1|AE009948.1_874_cas;Genome_ID=SEQF1332.1;Feature_type=CDS;Product=Cas Prediction : Cas9_1_II;coding_strand=+;E-value=0.0;Score=1241.8;Coverage_Seq=0.9948942377826404;Coverage_Hmm=0.9982142857142857
SEQF1332.1|AE009948.1	CCTyper	CDS	907398	908063	222	+	.	ID=SEQF1332.1|AE009948.1_877_cas;Genome_ID=SEQF1332.1;Feature_type=CDS;Product=Cas Prediction : Csn2_1_CAS-II-A;coding_strand=+;E-value=3.6999999999999997e-107;Score=353.9;Coverage_Seq=0.9774774774774775;Coverage_Hmm=0.9954128440366973