SEQF1356.1|CP000260.1	CCTyper	repeat_region	850515	850675	161	+	.	ID=SEQF1356.1|CP000260.1_1;Genome_ID=SEQF1356.1;Note=Predictor:CCtyper;Start:850515;End:850675;Consensus_Repeat:GTTTTAGAGCTATGCTGTTTTGAATGGTC;Number_of_Repeats:3;Repeat_Length:29;Average_Spacer_Length:37.0;Repeat_Identity:100.0;Spacer_Identity:48.0;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.996;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1356.1|CP000260.1	CCTyper	direct_repeat	850515	850543	29	+	.	ID=SEQF1356.1|CP000260.1_1_REPEAT1;Parent=SEQF1356.1|CP000260.1_1;Note=GTTTTAGAGCTATGCTGTTTTGAATGGTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1356.1|CP000260.1	CCTyper	binding_site	850544	850580	37	+	.	ID=SEQF1356.1|CP000260.1_1_SPACER1;Parent=SEQF1356.1|CP000260.1_1;Note=CCAAAACAAGCCAAACGCTAGGTTTAACCGATGTTGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1356.1|CP000260.1	CCTyper	direct_repeat	850581	850609	29	+	.	ID=SEQF1356.1|CP000260.1_1_REPEAT2;Parent=SEQF1356.1|CP000260.1_1;Note=GTTTTAGAGCTATGCTGTTTTGAATGGTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1356.1|CP000260.1	CCTyper	binding_site	850610	850646	37	+	.	ID=SEQF1356.1|CP000260.1_1_SPACER2;Parent=SEQF1356.1|CP000260.1_1;Note=CCAAAACTAAAAAAACTCATACTAAAAAAATAGATTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1356.1|CP000260.1	CCTyper	direct_repeat	850647	850675	29	+	.	ID=SEQF1356.1|CP000260.1_1_REPEAT3;Parent=SEQF1356.1|CP000260.1_1;Note=GTTTTAGAGCTATGCTGTTTTGAATGGTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1356.1|CP000260.1	CCTyper	repeat_region	1298991	1299222	232	+	.	ID=SEQF1356.1|CP000260.1_2;Genome_ID=SEQF1356.1;Note=Predictor:CCtyper;Start:1298991;End:1299222;Consensus_Repeat:TATTTCAATCCACTCACCCATGAAGGGTGAGAC;Number_of_Repeats:4;Repeat_Length:33;Average_Spacer_Length:33.3;Repeat_Identity:94.2;Spacer_Identity:41.0;Spacer_Length_Sem:0.7;Trusted:True;Cas_Type_Prediction: I-C;Cas_Subtype_Prediction:I-C;Subtype_Probability:0.977;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1356.1|CP000260.1	CCTyper	direct_repeat	1298991	1299023	33	+	.	ID=SEQF1356.1|CP000260.1_2_REPEAT1;Parent=SEQF1356.1|CP000260.1_2;Note=TCTTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1356.1|CP000260.1	CCTyper	binding_site	1299024	1299057	34	+	.	ID=SEQF1356.1|CP000260.1_2_SPACER1;Parent=SEQF1356.1|CP000260.1_2;Note=GTGAGGTAAGAGAACTTAAAGATATTATGAGAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1356.1|CP000260.1	CCTyper	direct_repeat	1299058	1299090	33	+	.	ID=SEQF1356.1|CP000260.1_2_REPEAT2;Parent=SEQF1356.1|CP000260.1_2;Note=TATTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1356.1|CP000260.1	CCTyper	binding_site	1299091	1299124	34	+	.	ID=SEQF1356.1|CP000260.1_2_SPACER2;Parent=SEQF1356.1|CP000260.1_2;Note=CATAGACTTTGTATTCATATAGTTTTTTCTCTAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1356.1|CP000260.1	CCTyper	direct_repeat	1299125	1299157	33	+	.	ID=SEQF1356.1|CP000260.1_2_REPEAT3;Parent=SEQF1356.1|CP000260.1_2;Note=TATTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1356.1|CP000260.1	CCTyper	binding_site	1299158	1299189	32	+	.	ID=SEQF1356.1|CP000260.1_2_SPACER3;Parent=SEQF1356.1|CP000260.1_2;Note=GCTAACATGATGTGGGAACAGGGTATCATGCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1356.1|CP000260.1	CCTyper	direct_repeat	1299190	1299222	33	+	.	ID=SEQF1356.1|CP000260.1_2_REPEAT4;Parent=SEQF1356.1|CP000260.1_2;Note=GATTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1356.1|CP000260.1	CCTyper	OPERON	1299371	1307390	8020	-	.	ID=SEQF1356.1|CP000260.1@23;Genome_ID=SEQF1356.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-C;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=I-C;Best_score=21.0;Genes=Cas2_4_CAS-I-II-III-IV-V-VI,Cas1_0_IC,Cas1_0_IC,Cas4_0_I-II,Cas7_2_CAS-I-C,Cas8c_0_IC,Cas5_0_IC,Cas3_1_CAS-I;Positions=1297,1298,1299,1300,1301,1302,1303,1304;E-values=3.70e-33,1.00e-93,6.40e-47,1.30e-35,4.90e-148,3.40e-178,4.40e-101,8.50e-148;CoverageSeq=0.939,0.99,0.964,0.84,0.993,0.979,0.805,0.934;CoverageHMM=0.989,0.559,0.397,0.983,0.989,0.998,1.0,0.995;Strand_Interference=-1;Strand_Adaptation=-1
SEQF1356.1|CP000260.1	CCTyper	OPERON	844446	850255	5810	+	.	ID=SEQF1356.1|CP000260.1@16;Genome_ID=SEQF1356.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Cas9_1_II,Cas1_4_CAS-I-II-III-IV-V-VI,Cas2_5_CAS-I-II-III-IV-V-VI,Csn2_1_CAS-II-A;Positions=836,837,838,839;E-values=0.00e+00,6.90e-104,1.60e-50,6.30e-73;CoverageSeq=0.996,0.928,0.99,0.888;CoverageHMM=1.0,0.996,0.905,0.688;Strand_Interference=1;Strand_Adaptation=1
SEQF1356.1|CP000260.1	CCTyper	CDS	1299675	1300250	192	-	.	ID=SEQF1356.1|CP000260.1_1298_cas;Genome_ID=SEQF1356.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IC;coding_strand=-;E-value=1e-93;Score=311.0;Coverage_Seq=0.9895833333333334;Coverage_Hmm=0.5588235294117647
SEQF1356.1|CP000260.1	CCTyper	CDS	1300284	1300700	139	-	.	ID=SEQF1356.1|CP000260.1_1299_cas;Genome_ID=SEQF1356.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IC;coding_strand=-;E-value=6.4e-47;Score=157.1;Coverage_Seq=0.9640287769784173;Coverage_Hmm=0.39705882352941174
SEQF1356.1|CP000260.1	CCTyper	CDS	848552	849421	290	+	.	ID=SEQF1356.1|CP000260.1_837_cas;Genome_ID=SEQF1356.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=6.9e-104;Score=343.6;Coverage_Seq=0.9275862068965517;Coverage_Hmm=0.9963636363636363
SEQF1356.1|CP000260.1	CCTyper	CDS	1299371	1299664	98	-	.	ID=SEQF1356.1|CP000260.1_1297_cas;Genome_ID=SEQF1356.1;Feature_type=CDS;Product=Cas Prediction : Cas2_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=3.7e-33;Score=110.6;Coverage_Seq=0.9387755102040817;Coverage_Hmm=0.9887640449438202
SEQF1356.1|CP000260.1	CCTyper	CDS	849448	849759	104	+	.	ID=SEQF1356.1|CP000260.1_838_cas;Genome_ID=SEQF1356.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.6e-50;Score=167.0;Coverage_Seq=0.9903846153846154;Coverage_Hmm=0.9051724137931034
SEQF1356.1|CP000260.1	CCTyper	CDS	1304982	1307390	803	-	.	ID=SEQF1356.1|CP000260.1_1304_cas;Genome_ID=SEQF1356.1;Feature_type=CDS;Product=Cas Prediction : Cas3_1_CAS-I;coding_strand=-;E-value=8.5e-148;Score=490.6;Coverage_Seq=0.933997509339975;Coverage_Hmm=0.9946308724832215
SEQF1356.1|CP000260.1	CCTyper	CDS	1300697	1301371	225	-	.	ID=SEQF1356.1|CP000260.1_1300_cas;Genome_ID=SEQF1356.1;Feature_type=CDS;Product=Cas Prediction : Cas4_0_I-II;coding_strand=-;E-value=1.3e-35;Score=119.6;Coverage_Seq=0.84;Coverage_Hmm=0.9833333333333333
SEQF1356.1|CP000260.1	CCTyper	CDS	1304097	1304849	251	-	.	ID=SEQF1356.1|CP000260.1_1303_cas;Genome_ID=SEQF1356.1;Feature_type=CDS;Product=Cas Prediction : Cas5_0_IC;coding_strand=-;E-value=4.4000000000000004e-101;Score=333.9;Coverage_Seq=0.8047808764940239;Coverage_Hmm=1.0
SEQF1356.1|CP000260.1	CCTyper	CDS	1301373	1302221	283	-	.	ID=SEQF1356.1|CP000260.1_1301_cas;Genome_ID=SEQF1356.1;Feature_type=CDS;Product=Cas Prediction : Cas7_2_CAS-I-C;coding_strand=-;E-value=4.9e-148;Score=488.8;Coverage_Seq=0.9929328621908127;Coverage_Hmm=0.9893992932862191
SEQF1356.1|CP000260.1	CCTyper	CDS	1302226	1304121	632	-	.	ID=SEQF1356.1|CP000260.1_1302_cas;Genome_ID=SEQF1356.1;Feature_type=CDS;Product=Cas Prediction : Cas8c_0_IC;coding_strand=-;E-value=3.4000000000000003e-178;Score=590.5;Coverage_Seq=0.9794303797468354;Coverage_Hmm=0.9982993197278912
SEQF1356.1|CP000260.1	CCTyper	CDS	844446	848552	1369	+	.	ID=SEQF1356.1|CP000260.1_836_cas;Genome_ID=SEQF1356.1;Feature_type=CDS;Product=Cas Prediction : Cas9_1_II;coding_strand=+;E-value=0.0;Score=1681.3;Coverage_Seq=0.9963476990504018;Coverage_Hmm=1.0
SEQF1356.1|CP000260.1	CCTyper	CDS	849749	850255	169	+	.	ID=SEQF1356.1|CP000260.1_839_cas;Genome_ID=SEQF1356.1;Feature_type=CDS;Product=Cas Prediction : Csn2_1_CAS-II-A;coding_strand=+;E-value=6.300000000000001e-73;Score=241.8;Coverage_Seq=0.8875739644970414;Coverage_Hmm=0.6880733944954128