SEQF1359.1|CP000261.1	CCTyper	repeat_region	819152	819313	162	+	.	ID=SEQF1359.1|CP000261.1_1;Genome_ID=SEQF1359.1;Note=Predictor:CCtyper;Start:819152;End:819313;Consensus_Repeat:GTTTTAGAGCTATGCTGTTTTGAATGGTC;Number_of_Repeats:3;Repeat_Length:29;Average_Spacer_Length:37.5;Repeat_Identity:100.0;Spacer_Identity:53.1;Spacer_Length_Sem:0.5;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.996;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1359.1|CP000261.1	CCTyper	direct_repeat	819152	819180	29	+	.	ID=SEQF1359.1|CP000261.1_1_REPEAT1;Parent=SEQF1359.1|CP000261.1_1;Note=GTTTTAGAGCTATGCTGTTTTGAATGGTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1359.1|CP000261.1	CCTyper	binding_site	819181	819218	38	+	.	ID=SEQF1359.1|CP000261.1_1_SPACER1;Parent=SEQF1359.1|CP000261.1_1;Note=CCAAAACGATTGACCACAACATCCAACGCTTAGGTTAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1359.1|CP000261.1	CCTyper	direct_repeat	819219	819247	29	+	.	ID=SEQF1359.1|CP000261.1_1_REPEAT2;Parent=SEQF1359.1|CP000261.1_1;Note=GTTTTAGAGCTATGCTGTTTTGAATGGTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1359.1|CP000261.1	CCTyper	binding_site	819248	819284	37	+	.	ID=SEQF1359.1|CP000261.1_1_SPACER2;Parent=SEQF1359.1|CP000261.1_1;Note=CCAAAACAATAGAGCTAGACAAAAAATTGAGTTTGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1359.1|CP000261.1	CCTyper	direct_repeat	819285	819313	29	+	.	ID=SEQF1359.1|CP000261.1_1_REPEAT3;Parent=SEQF1359.1|CP000261.1_1;Note=GTTTTAGAGCTATGCTGTTTTGAATGGTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1359.1|CP000261.1	CCTyper	repeat_region	1257972	1258403	432	+	.	ID=SEQF1359.1|CP000261.1_2;Genome_ID=SEQF1359.1;Note=Predictor:CCtyper;Start:1257972;End:1258403;Consensus_Repeat:ATTTCAATCCACTCACCCATGAAGGGTGAGAC;Number_of_Repeats:7;Repeat_Length:32;Average_Spacer_Length:34.7;Repeat_Identity:98.3;Spacer_Identity:45.1;Spacer_Length_Sem:0.4;Trusted:True;Cas_Type_Prediction: I-C;Cas_Subtype_Prediction:I-C;Subtype_Probability:0.995;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1359.1|CP000261.1	CCTyper	direct_repeat	1257972	1258003	32	+	.	ID=SEQF1359.1|CP000261.1_2_REPEAT1;Parent=SEQF1359.1|CP000261.1_2;Note=CTTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1359.1|CP000261.1	CCTyper	binding_site	1258004	1258036	33	+	.	ID=SEQF1359.1|CP000261.1_2_SPACER1;Parent=SEQF1359.1|CP000261.1_2;Note=AACTAATTCCGCAAAGGCATTGTTCATATAATG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1359.1|CP000261.1	CCTyper	direct_repeat	1258037	1258068	32	+	.	ID=SEQF1359.1|CP000261.1_2_REPEAT2;Parent=SEQF1359.1|CP000261.1_2;Note=ATTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1359.1|CP000261.1	CCTyper	binding_site	1258069	1258103	35	+	.	ID=SEQF1359.1|CP000261.1_2_SPACER2;Parent=SEQF1359.1|CP000261.1_2;Note=TTGCAAAATTTACGTGATAACTTTAATAAAATAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1359.1|CP000261.1	CCTyper	direct_repeat	1258104	1258135	32	+	.	ID=SEQF1359.1|CP000261.1_2_REPEAT3;Parent=SEQF1359.1|CP000261.1_2;Note=ATTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1359.1|CP000261.1	CCTyper	binding_site	1258136	1258170	35	+	.	ID=SEQF1359.1|CP000261.1_2_SPACER3;Parent=SEQF1359.1|CP000261.1_2;Note=CAAACGTAGCAAATTCTACTTTTACAAAAGTTGGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1359.1|CP000261.1	CCTyper	direct_repeat	1258171	1258202	32	+	.	ID=SEQF1359.1|CP000261.1_2_REPEAT4;Parent=SEQF1359.1|CP000261.1_2;Note=ATTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1359.1|CP000261.1	CCTyper	binding_site	1258203	1258237	35	+	.	ID=SEQF1359.1|CP000261.1_2_SPACER4;Parent=SEQF1359.1|CP000261.1_2;Note=GCTTTATCGATTTTTTAGAATATCTAGCCGAATCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1359.1|CP000261.1	CCTyper	direct_repeat	1258238	1258269	32	+	.	ID=SEQF1359.1|CP000261.1_2_REPEAT5;Parent=SEQF1359.1|CP000261.1_2;Note=ATTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1359.1|CP000261.1	CCTyper	binding_site	1258270	1258305	36	+	.	ID=SEQF1359.1|CP000261.1_2_SPACER5;Parent=SEQF1359.1|CP000261.1_2;Note=GTAACCCTAACTGATCAAGATGCAGGAGATGAAATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1359.1|CP000261.1	CCTyper	direct_repeat	1258306	1258337	32	+	.	ID=SEQF1359.1|CP000261.1_2_REPEAT6;Parent=SEQF1359.1|CP000261.1_2;Note=ATTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1359.1|CP000261.1	CCTyper	binding_site	1258338	1258371	34	+	.	ID=SEQF1359.1|CP000261.1_2_SPACER6;Parent=SEQF1359.1|CP000261.1_2;Note=GAACTCTATGTTTCCTTTTATCTGCAAAATCGAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1359.1|CP000261.1	CCTyper	direct_repeat	1258372	1258403	32	+	.	ID=SEQF1359.1|CP000261.1_2_REPEAT7;Parent=SEQF1359.1|CP000261.1_2;Note=ATTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1359.1|CP000261.1	CCTyper	OPERON	813084	819049	5966	+	.	ID=SEQF1359.1|CP000261.1@14;Genome_ID=SEQF1359.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Cas9_1_II,Cas1_4_CAS-I-II-III-IV-V-VI,Cas2_5_CAS-I-II-III-IV-V-VI,Csn2_1_CAS-II-A;Positions=794,795,796,797;E-values=0.00e+00,6.60e-104,1.60e-50,2.40e-108;CoverageSeq=0.996,0.928,0.99,0.982;CoverageHMM=1.0,0.996,0.905,0.995;Strand_Interference=1;Strand_Adaptation=1
SEQF1359.1|CP000261.1	CCTyper	OPERON	1258552	1266571	8020	-	.	ID=SEQF1359.1|CP000261.1@23;Genome_ID=SEQF1359.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-C;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=I-C;Best_score=21.0;Genes=Cas2_4_CAS-I-II-III-IV-V-VI,Cas1_0_IC,Cas4_0_I-II,Cas7_2_CAS-I-C,Cas8c_0_IC,Cas5_0_IC,Cas3_1_CAS-I;Positions=1250,1251,1252,1253,1254,1255,1256;E-values=3.50e-33,1.60e-148,5.50e-36,2.50e-146,8.20e-177,5.70e-101,4.00e-150;CoverageSeq=0.939,0.991,0.84,0.993,0.979,0.831,0.934;CoverageHMM=0.989,1.0,0.983,0.989,0.998,1.0,0.995;Strand_Interference=-1;Strand_Adaptation=-1
SEQF1359.1|CP000261.1	CCTyper	CDS	1258856	1259881	342	-	.	ID=SEQF1359.1|CP000261.1_1251_cas;Genome_ID=SEQF1359.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IC;coding_strand=-;E-value=1.6e-148;Score=491.0;Coverage_Seq=0.9912280701754386;Coverage_Hmm=1.0
SEQF1359.1|CP000261.1	CCTyper	CDS	817190	818059	290	+	.	ID=SEQF1359.1|CP000261.1_795_cas;Genome_ID=SEQF1359.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=6.6e-104;Score=343.6;Coverage_Seq=0.9275862068965517;Coverage_Hmm=0.9963636363636363
SEQF1359.1|CP000261.1	CCTyper	CDS	1258552	1258845	98	-	.	ID=SEQF1359.1|CP000261.1_1250_cas;Genome_ID=SEQF1359.1;Feature_type=CDS;Product=Cas Prediction : Cas2_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=3.5e-33;Score=110.6;Coverage_Seq=0.9387755102040817;Coverage_Hmm=0.9887640449438202
SEQF1359.1|CP000261.1	CCTyper	CDS	818086	818397	104	+	.	ID=SEQF1359.1|CP000261.1_796_cas;Genome_ID=SEQF1359.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.6e-50;Score=167.0;Coverage_Seq=0.9903846153846154;Coverage_Hmm=0.9051724137931034
SEQF1359.1|CP000261.1	CCTyper	CDS	1264163	1266571	803	-	.	ID=SEQF1359.1|CP000261.1_1256_cas;Genome_ID=SEQF1359.1;Feature_type=CDS;Product=Cas Prediction : Cas3_1_CAS-I;coding_strand=-;E-value=4e-150;Score=498.2;Coverage_Seq=0.933997509339975;Coverage_Hmm=0.9946308724832215
SEQF1359.1|CP000261.1	CCTyper	CDS	1259878	1260552	225	-	.	ID=SEQF1359.1|CP000261.1_1252_cas;Genome_ID=SEQF1359.1;Feature_type=CDS;Product=Cas Prediction : Cas4_0_I-II;coding_strand=-;E-value=5.5000000000000005e-36;Score=120.8;Coverage_Seq=0.84;Coverage_Hmm=0.9833333333333333
SEQF1359.1|CP000261.1	CCTyper	CDS	1263302	1264030	243	-	.	ID=SEQF1359.1|CP000261.1_1255_cas;Genome_ID=SEQF1359.1;Feature_type=CDS;Product=Cas Prediction : Cas5_0_IC;coding_strand=-;E-value=5.7e-101;Score=333.5;Coverage_Seq=0.831275720164609;Coverage_Hmm=1.0
SEQF1359.1|CP000261.1	CCTyper	CDS	1260554	1261402	283	-	.	ID=SEQF1359.1|CP000261.1_1253_cas;Genome_ID=SEQF1359.1;Feature_type=CDS;Product=Cas Prediction : Cas7_2_CAS-I-C;coding_strand=-;E-value=2.5000000000000002e-146;Score=483.1;Coverage_Seq=0.9929328621908127;Coverage_Hmm=0.9893992932862191
SEQF1359.1|CP000261.1	CCTyper	CDS	1261407	1263302	632	-	.	ID=SEQF1359.1|CP000261.1_1254_cas;Genome_ID=SEQF1359.1;Feature_type=CDS;Product=Cas Prediction : Cas8c_0_IC;coding_strand=-;E-value=8.2e-177;Score=585.9;Coverage_Seq=0.9794303797468354;Coverage_Hmm=0.9982993197278912
SEQF1359.1|CP000261.1	CCTyper	CDS	813084	817190	1369	+	.	ID=SEQF1359.1|CP000261.1_794_cas;Genome_ID=SEQF1359.1;Feature_type=CDS;Product=Cas Prediction : Cas9_1_II;coding_strand=+;E-value=0.0;Score=1673.9;Coverage_Seq=0.9963476990504018;Coverage_Hmm=1.0
SEQF1359.1|CP000261.1	CCTyper	CDS	818387	819049	221	+	.	ID=SEQF1359.1|CP000261.1_797_cas;Genome_ID=SEQF1359.1;Feature_type=CDS;Product=Cas Prediction : Csn2_1_CAS-II-A;coding_strand=+;E-value=2.4e-108;Score=357.5;Coverage_Seq=0.9819004524886877;Coverage_Hmm=0.9954128440366973