SEQF1362.1|CP000056.1	CCTyper	repeat_region	777299	777598	300	+	.	ID=SEQF1362.1|CP000056.1_1;Genome_ID=SEQF1362.1;Note=Predictor:CCtyper;Start:777299;End:777598;Consensus_Repeat:GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC;Number_of_Repeats:5;Repeat_Length:36;Average_Spacer_Length:30;Repeat_Identity:93.8;Spacer_Identity:41.9;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.998;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1362.1|CP000056.1	CCTyper	direct_repeat	777299	777334	36	+	.	ID=SEQF1362.1|CP000056.1_1_REPEAT1;Parent=SEQF1362.1|CP000056.1_1;Note=GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1362.1|CP000056.1	CCTyper	binding_site	777335	777364	30	+	.	ID=SEQF1362.1|CP000056.1_1_SPACER1;Parent=SEQF1362.1|CP000056.1_1;Note=TGCTCCAGATGGATTTTTAAACTGATTATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1362.1|CP000056.1	CCTyper	direct_repeat	777365	777400	36	+	.	ID=SEQF1362.1|CP000056.1_1_REPEAT2;Parent=SEQF1362.1|CP000056.1_1;Note=GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1362.1|CP000056.1	CCTyper	binding_site	777401	777430	30	+	.	ID=SEQF1362.1|CP000056.1_1_SPACER2;Parent=SEQF1362.1|CP000056.1_1;Note=TAGAAATTGACAATGCTTTTTCTTTTGTCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1362.1|CP000056.1	CCTyper	direct_repeat	777431	777466	36	+	.	ID=SEQF1362.1|CP000056.1_1_REPEAT3;Parent=SEQF1362.1|CP000056.1_1;Note=GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1362.1|CP000056.1	CCTyper	binding_site	777467	777496	30	+	.	ID=SEQF1362.1|CP000056.1_1_SPACER3;Parent=SEQF1362.1|CP000056.1_1;Note=AATAGAGCTAGACAAAAAATTGAGTTTGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1362.1|CP000056.1	CCTyper	direct_repeat	777497	777532	36	+	.	ID=SEQF1362.1|CP000056.1_1_REPEAT4;Parent=SEQF1362.1|CP000056.1_1;Note=GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1362.1|CP000056.1	CCTyper	binding_site	777533	777562	30	+	.	ID=SEQF1362.1|CP000056.1_1_SPACER4;Parent=SEQF1362.1|CP000056.1_1;Note=GACATATTAACGTCCTTTCTCCTGCTTTCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1362.1|CP000056.1	CCTyper	direct_repeat	777563	777598	36	+	.	ID=SEQF1362.1|CP000056.1_1_REPEAT5;Parent=SEQF1362.1|CP000056.1_1;Note=GTTTTAGAGCTATGCTGTTTTGAATGGTCTCCATTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1362.1|CP000056.1	CCTyper	OPERON	771231	777196	5966	+	.	ID=SEQF1362.1|CP000056.1@17;Genome_ID=SEQF1362.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Cas9_1_II,Cas1_4_CAS-I-II-III-IV-V-VI,Cas2_5_CAS-I-II-III-IV-V-VI,Csn2_1_CAS-II-A;Positions=704,705,706,707;E-values=0.00e+00,6.70e-104,1.60e-50,2.40e-108;CoverageSeq=0.996,0.928,0.99,0.982;CoverageHMM=1.0,0.996,0.905,0.995;Strand_Interference=1;Strand_Adaptation=1
SEQF1362.1|CP000056.1	CCTyper	OPERON	1272140	1280159	8020	-	.	ID=SEQF1362.1|CP000056.1@27;Genome_ID=SEQF1362.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-C;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=I-C;Best_score=21.0;Genes=Cas2_4_CAS-I-II-III-IV-V-VI,Cas1_0_IC,Cas4_0_I-II,Cas7_2_CAS-I-C,Cas8c_0_IC,Cas5_0_IC,Cas3_1_CAS-I;Positions=1242,1243,1244,1245,1246,1247,1248;E-values=3.60e-33,2.90e-147,6.30e-36,4.80e-148,3.60e-177,2.20e-101,4.00e-150;CoverageSeq=0.939,0.991,0.84,0.993,0.979,0.831,0.934;CoverageHMM=0.989,1.0,0.983,0.989,0.998,1.0,0.995;Strand_Interference=-1;Strand_Adaptation=-1
SEQF1362.1|CP000056.1	CCTyper	CDS	1272444	1273469	342	-	.	ID=SEQF1362.1|CP000056.1_1243_cas;Genome_ID=SEQF1362.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IC;coding_strand=-;E-value=2.9e-147;Score=487.0;Coverage_Seq=0.9912280701754386;Coverage_Hmm=1.0
SEQF1362.1|CP000056.1	CCTyper	CDS	775337	776206	290	+	.	ID=SEQF1362.1|CP000056.1_705_cas;Genome_ID=SEQF1362.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=6.7e-104;Score=343.6;Coverage_Seq=0.9275862068965517;Coverage_Hmm=0.9963636363636363
SEQF1362.1|CP000056.1	CCTyper	CDS	1272140	1272433	98	-	.	ID=SEQF1362.1|CP000056.1_1242_cas;Genome_ID=SEQF1362.1;Feature_type=CDS;Product=Cas Prediction : Cas2_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=3.6e-33;Score=110.6;Coverage_Seq=0.9387755102040817;Coverage_Hmm=0.9887640449438202
SEQF1362.1|CP000056.1	CCTyper	CDS	776233	776544	104	+	.	ID=SEQF1362.1|CP000056.1_706_cas;Genome_ID=SEQF1362.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.6e-50;Score=167.0;Coverage_Seq=0.9903846153846154;Coverage_Hmm=0.9051724137931034
SEQF1362.1|CP000056.1	CCTyper	CDS	1277751	1280159	803	-	.	ID=SEQF1362.1|CP000056.1_1248_cas;Genome_ID=SEQF1362.1;Feature_type=CDS;Product=Cas Prediction : Cas3_1_CAS-I;coding_strand=-;E-value=4e-150;Score=498.2;Coverage_Seq=0.933997509339975;Coverage_Hmm=0.9946308724832215
SEQF1362.1|CP000056.1	CCTyper	CDS	1273466	1274140	225	-	.	ID=SEQF1362.1|CP000056.1_1244_cas;Genome_ID=SEQF1362.1;Feature_type=CDS;Product=Cas Prediction : Cas4_0_I-II;coding_strand=-;E-value=6.300000000000001e-36;Score=120.6;Coverage_Seq=0.84;Coverage_Hmm=0.9833333333333333
SEQF1362.1|CP000056.1	CCTyper	CDS	1276890	1277618	243	-	.	ID=SEQF1362.1|CP000056.1_1247_cas;Genome_ID=SEQF1362.1;Feature_type=CDS;Product=Cas Prediction : Cas5_0_IC;coding_strand=-;E-value=2.2000000000000002e-101;Score=334.8;Coverage_Seq=0.831275720164609;Coverage_Hmm=1.0
SEQF1362.1|CP000056.1	CCTyper	CDS	1274142	1274990	283	-	.	ID=SEQF1362.1|CP000056.1_1245_cas;Genome_ID=SEQF1362.1;Feature_type=CDS;Product=Cas Prediction : Cas7_2_CAS-I-C;coding_strand=-;E-value=4.7999999999999996e-148;Score=488.8;Coverage_Seq=0.9929328621908127;Coverage_Hmm=0.9893992932862191
SEQF1362.1|CP000056.1	CCTyper	CDS	1274995	1276890	632	-	.	ID=SEQF1362.1|CP000056.1_1246_cas;Genome_ID=SEQF1362.1;Feature_type=CDS;Product=Cas Prediction : Cas8c_0_IC;coding_strand=-;E-value=3.6e-177;Score=587.1;Coverage_Seq=0.9794303797468354;Coverage_Hmm=0.9982993197278912
SEQF1362.1|CP000056.1	CCTyper	CDS	771231	775337	1369	+	.	ID=SEQF1362.1|CP000056.1_704_cas;Genome_ID=SEQF1362.1;Feature_type=CDS;Product=Cas Prediction : Cas9_1_II;coding_strand=+;E-value=0.0;Score=1678.3;Coverage_Seq=0.9963476990504018;Coverage_Hmm=1.0
SEQF1362.1|CP000056.1	CCTyper	CDS	776534	777196	221	+	.	ID=SEQF1362.1|CP000056.1_707_cas;Genome_ID=SEQF1362.1;Feature_type=CDS;Product=Cas Prediction : Csn2_1_CAS-II-A;coding_strand=+;E-value=2.4e-108;Score=357.5;Coverage_Seq=0.9819004524886877;Coverage_Hmm=0.9954128440366973