SEQF1364.1|CP000259.1	CCTyper	repeat_region	858576	858737	162	+	.	ID=SEQF1364.1|CP000259.1_1;Genome_ID=SEQF1364.1;Note=Predictor:CCtyper;Start:858576;End:858737;Consensus_Repeat:GTTTTAGAGCTATGCTGTTTTGAATGGTC;Number_of_Repeats:3;Repeat_Length:29;Average_Spacer_Length:37.5;Repeat_Identity:100.0;Spacer_Identity:53.1;Spacer_Length_Sem:0.5;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.996;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1364.1|CP000259.1	CCTyper	direct_repeat	858576	858604	29	+	.	ID=SEQF1364.1|CP000259.1_1_REPEAT1;Parent=SEQF1364.1|CP000259.1_1;Note=GTTTTAGAGCTATGCTGTTTTGAATGGTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1364.1|CP000259.1	CCTyper	binding_site	858605	858642	38	+	.	ID=SEQF1364.1|CP000259.1_1_SPACER1;Parent=SEQF1364.1|CP000259.1_1;Note=CCAAAACGATTGACCACAACATCCAACGCTTAGGTTAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1364.1|CP000259.1	CCTyper	direct_repeat	858643	858671	29	+	.	ID=SEQF1364.1|CP000259.1_1_REPEAT2;Parent=SEQF1364.1|CP000259.1_1;Note=GTTTTAGAGCTATGCTGTTTTGAATGGTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1364.1|CP000259.1	CCTyper	binding_site	858672	858708	37	+	.	ID=SEQF1364.1|CP000259.1_1_SPACER2;Parent=SEQF1364.1|CP000259.1_1;Note=CCAAAACAATAGAGCTAGACAAAAAATTGAGTTTGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1364.1|CP000259.1	CCTyper	direct_repeat	858709	858737	29	+	.	ID=SEQF1364.1|CP000259.1_1_REPEAT3;Parent=SEQF1364.1|CP000259.1_1;Note=GTTTTAGAGCTATGCTGTTTTGAATGGTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1364.1|CP000259.1	CCTyper	repeat_region	1234060	1234560	501	+	.	ID=SEQF1364.1|CP000259.1_2;Genome_ID=SEQF1364.1;Note=Predictor:CCtyper;Start:1234060;End:1234560;Consensus_Repeat:TATTTCAATCCACTCACCCATGAAGGGTGAGAC;Number_of_Repeats:8;Repeat_Length:33;Average_Spacer_Length:33.9;Repeat_Identity:95.8;Spacer_Identity:44.0;Spacer_Length_Sem:0.4;Trusted:True;Cas_Type_Prediction: I-C;Cas_Subtype_Prediction:I-C;Subtype_Probability:0.977;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1364.1|CP000259.1	CCTyper	direct_repeat	1234060	1234092	33	+	.	ID=SEQF1364.1|CP000259.1_2_REPEAT1;Parent=SEQF1364.1|CP000259.1_2;Note=TCTTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1364.1|CP000259.1	CCTyper	binding_site	1234093	1234124	32	+	.	ID=SEQF1364.1|CP000259.1_2_SPACER1;Parent=SEQF1364.1|CP000259.1_2;Note=AACTAATTCCGCAAAGGCATTGTTCATATAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1364.1|CP000259.1	CCTyper	direct_repeat	1234125	1234157	33	+	.	ID=SEQF1364.1|CP000259.1_2_REPEAT2;Parent=SEQF1364.1|CP000259.1_2;Note=GATTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1364.1|CP000259.1	CCTyper	binding_site	1234158	1234191	34	+	.	ID=SEQF1364.1|CP000259.1_2_SPACER2;Parent=SEQF1364.1|CP000259.1_2;Note=TTGCAAAATTTACGTGATAACTTTAATAAAATAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1364.1|CP000259.1	CCTyper	direct_repeat	1234192	1234224	33	+	.	ID=SEQF1364.1|CP000259.1_2_REPEAT3;Parent=SEQF1364.1|CP000259.1_2;Note=TATTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1364.1|CP000259.1	CCTyper	binding_site	1234225	1234258	34	+	.	ID=SEQF1364.1|CP000259.1_2_SPACER3;Parent=SEQF1364.1|CP000259.1_2;Note=CAAACGTAGCAAATTCTACTTTTACAAAAGTTGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1364.1|CP000259.1	CCTyper	direct_repeat	1234259	1234291	33	+	.	ID=SEQF1364.1|CP000259.1_2_REPEAT4;Parent=SEQF1364.1|CP000259.1_2;Note=AATTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1364.1|CP000259.1	CCTyper	binding_site	1234292	1234325	34	+	.	ID=SEQF1364.1|CP000259.1_2_SPACER4;Parent=SEQF1364.1|CP000259.1_2;Note=GCTTTATCGATTTTTTAGAATATCTAGCCGAATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1364.1|CP000259.1	CCTyper	direct_repeat	1234326	1234358	33	+	.	ID=SEQF1364.1|CP000259.1_2_REPEAT5;Parent=SEQF1364.1|CP000259.1_2;Note=TATTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1364.1|CP000259.1	CCTyper	binding_site	1234359	1234393	35	+	.	ID=SEQF1364.1|CP000259.1_2_SPACER5;Parent=SEQF1364.1|CP000259.1_2;Note=ATTGGCCAGAATCATGTTCAATATGTCCTAGTTCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1364.1|CP000259.1	CCTyper	direct_repeat	1234394	1234426	33	+	.	ID=SEQF1364.1|CP000259.1_2_REPEAT6;Parent=SEQF1364.1|CP000259.1_2;Note=TATTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1364.1|CP000259.1	CCTyper	binding_site	1234427	1234461	35	+	.	ID=SEQF1364.1|CP000259.1_2_SPACER6;Parent=SEQF1364.1|CP000259.1_2;Note=GTAACCCTAACTGATCAAGATGCAGGAGATGAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1364.1|CP000259.1	CCTyper	direct_repeat	1234462	1234494	33	+	.	ID=SEQF1364.1|CP000259.1_2_REPEAT7;Parent=SEQF1364.1|CP000259.1_2;Note=TATTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1364.1|CP000259.1	CCTyper	binding_site	1234495	1234527	33	+	.	ID=SEQF1364.1|CP000259.1_2_SPACER7;Parent=SEQF1364.1|CP000259.1_2;Note=GAACTCTATGTTTCCTTTTATCTGCAAAATCGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1364.1|CP000259.1	CCTyper	direct_repeat	1234528	1234560	33	+	.	ID=SEQF1364.1|CP000259.1_2_REPEAT8;Parent=SEQF1364.1|CP000259.1_2;Note=TATTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1364.1|CP000259.1	CCTyper	OPERON	852508	858473	5966	+	.	ID=SEQF1364.1|CP000259.1@16;Genome_ID=SEQF1364.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Cas9_1_II,Cas1_4_CAS-I-II-III-IV-V-VI,Cas2_5_CAS-I-II-III-IV-V-VI,Csn2_1_CAS-II-A;Positions=830,831,832,833;E-values=0.00e+00,6.40e-104,1.50e-50,2.30e-108;CoverageSeq=0.996,0.928,0.99,0.982;CoverageHMM=1.0,0.996,0.905,0.995;Strand_Interference=1;Strand_Adaptation=1
SEQF1364.1|CP000259.1	CCTyper	OPERON	1234709	1242728	8020	-	.	ID=SEQF1364.1|CP000259.1@23;Genome_ID=SEQF1364.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-C;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=I-C;Best_score=21.0;Genes=Cas2_4_CAS-I-II-III-IV-V-VI,Cas1_0_IC,Cas4_0_I-II,Cas7_2_CAS-I-C,Cas8c_0_IC,Cas5_0_IC,Cas3_1_CAS-I;Positions=1199,1200,1201,1202,1203,1204,1205;E-values=3.40e-33,1.60e-148,5.30e-36,2.40e-146,7.90e-177,5.50e-101,3.80e-150;CoverageSeq=0.939,0.991,0.84,0.993,0.979,0.831,0.934;CoverageHMM=0.989,1.0,0.983,0.989,0.998,1.0,0.995;Strand_Interference=-1;Strand_Adaptation=-1
SEQF1364.1|CP000259.1	CCTyper	CDS	1235013	1236038	342	-	.	ID=SEQF1364.1|CP000259.1_1200_cas;Genome_ID=SEQF1364.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IC;coding_strand=-;E-value=1.6e-148;Score=491.0;Coverage_Seq=0.9912280701754386;Coverage_Hmm=1.0
SEQF1364.1|CP000259.1	CCTyper	CDS	856614	857483	290	+	.	ID=SEQF1364.1|CP000259.1_831_cas;Genome_ID=SEQF1364.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=6.4e-104;Score=343.6;Coverage_Seq=0.9275862068965517;Coverage_Hmm=0.9963636363636363
SEQF1364.1|CP000259.1	CCTyper	CDS	1234709	1235002	98	-	.	ID=SEQF1364.1|CP000259.1_1199_cas;Genome_ID=SEQF1364.1;Feature_type=CDS;Product=Cas Prediction : Cas2_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=3.4e-33;Score=110.6;Coverage_Seq=0.9387755102040817;Coverage_Hmm=0.9887640449438202
SEQF1364.1|CP000259.1	CCTyper	CDS	857510	857821	104	+	.	ID=SEQF1364.1|CP000259.1_832_cas;Genome_ID=SEQF1364.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.5e-50;Score=167.0;Coverage_Seq=0.9903846153846154;Coverage_Hmm=0.9051724137931034
SEQF1364.1|CP000259.1	CCTyper	CDS	1240320	1242728	803	-	.	ID=SEQF1364.1|CP000259.1_1205_cas;Genome_ID=SEQF1364.1;Feature_type=CDS;Product=Cas Prediction : Cas3_1_CAS-I;coding_strand=-;E-value=3.8e-150;Score=498.2;Coverage_Seq=0.933997509339975;Coverage_Hmm=0.9946308724832215
SEQF1364.1|CP000259.1	CCTyper	CDS	1236035	1236709	225	-	.	ID=SEQF1364.1|CP000259.1_1201_cas;Genome_ID=SEQF1364.1;Feature_type=CDS;Product=Cas Prediction : Cas4_0_I-II;coding_strand=-;E-value=5.3000000000000005e-36;Score=120.8;Coverage_Seq=0.84;Coverage_Hmm=0.9833333333333333
SEQF1364.1|CP000259.1	CCTyper	CDS	1239459	1240187	243	-	.	ID=SEQF1364.1|CP000259.1_1204_cas;Genome_ID=SEQF1364.1;Feature_type=CDS;Product=Cas Prediction : Cas5_0_IC;coding_strand=-;E-value=5.5000000000000004e-101;Score=333.5;Coverage_Seq=0.831275720164609;Coverage_Hmm=1.0
SEQF1364.1|CP000259.1	CCTyper	CDS	1236711	1237559	283	-	.	ID=SEQF1364.1|CP000259.1_1202_cas;Genome_ID=SEQF1364.1;Feature_type=CDS;Product=Cas Prediction : Cas7_2_CAS-I-C;coding_strand=-;E-value=2.4e-146;Score=483.1;Coverage_Seq=0.9929328621908127;Coverage_Hmm=0.9893992932862191
SEQF1364.1|CP000259.1	CCTyper	CDS	1237564	1239459	632	-	.	ID=SEQF1364.1|CP000259.1_1203_cas;Genome_ID=SEQF1364.1;Feature_type=CDS;Product=Cas Prediction : Cas8c_0_IC;coding_strand=-;E-value=7.9e-177;Score=585.9;Coverage_Seq=0.9794303797468354;Coverage_Hmm=0.9982993197278912
SEQF1364.1|CP000259.1	CCTyper	CDS	852508	856614	1369	+	.	ID=SEQF1364.1|CP000259.1_830_cas;Genome_ID=SEQF1364.1;Feature_type=CDS;Product=Cas Prediction : Cas9_1_II;coding_strand=+;E-value=0.0;Score=1673.5;Coverage_Seq=0.9963476990504018;Coverage_Hmm=1.0
SEQF1364.1|CP000259.1	CCTyper	CDS	857811	858473	221	+	.	ID=SEQF1364.1|CP000259.1_833_cas;Genome_ID=SEQF1364.1;Feature_type=CDS;Product=Cas Prediction : Csn2_1_CAS-II-A;coding_strand=+;E-value=2.3e-108;Score=357.5;Coverage_Seq=0.9819004524886877;Coverage_Hmm=0.9954128440366973