SEQF1494.1|CP000829.1	CCTyper	repeat_region	827278	827578	301	+	.	ID=SEQF1494.1|CP000829.1_1;Genome_ID=SEQF1494.1;Note=Predictor:CCtyper;Start:827278;End:827578;Consensus_Repeat:GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC;Number_of_Repeats:5;Repeat_Length:36;Average_Spacer_Length:30.2;Repeat_Identity:88.4;Spacer_Identity:44.8;Spacer_Length_Sem:0.2;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.998;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1494.1|CP000829.1	CCTyper	direct_repeat	827278	827313	36	+	.	ID=SEQF1494.1|CP000829.1_1_REPEAT1;Parent=SEQF1494.1|CP000829.1_1;Note=GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1494.1|CP000829.1	CCTyper	binding_site	827314	827343	30	+	.	ID=SEQF1494.1|CP000829.1_1_SPACER1;Parent=SEQF1494.1|CP000829.1_1;Note=AGCTGCATCGCTGTAGTATTTACCAATATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1494.1|CP000829.1	CCTyper	direct_repeat	827344	827379	36	+	.	ID=SEQF1494.1|CP000829.1_1_REPEAT2;Parent=SEQF1494.1|CP000829.1_1;Note=GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1494.1|CP000829.1	CCTyper	binding_site	827380	827410	31	+	.	ID=SEQF1494.1|CP000829.1_1_SPACER2;Parent=SEQF1494.1|CP000829.1_1;Note=ACTGGGAAATTGATAAAATCGGCAATGCCCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1494.1|CP000829.1	CCTyper	direct_repeat	827411	827446	36	+	.	ID=SEQF1494.1|CP000829.1_1_REPEAT3;Parent=SEQF1494.1|CP000829.1_1;Note=GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1494.1|CP000829.1	CCTyper	binding_site	827447	827476	30	+	.	ID=SEQF1494.1|CP000829.1_1_SPACER3;Parent=SEQF1494.1|CP000829.1_1;Note=CAAGTTGTTTAATCGAAGAATTTCCCGTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1494.1|CP000829.1	CCTyper	direct_repeat	827477	827512	36	+	.	ID=SEQF1494.1|CP000829.1_1_REPEAT4;Parent=SEQF1494.1|CP000829.1_1;Note=GTTTTAGAGTTATGCTGTTTTGAATGGTCCCAAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1494.1|CP000829.1	CCTyper	binding_site	827513	827542	30	+	.	ID=SEQF1494.1|CP000829.1_1_SPACER4;Parent=SEQF1494.1|CP000829.1_1;Note=GTGCCTGTGGAGGAATTGATGAACATGCCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1494.1|CP000829.1	CCTyper	direct_repeat	827543	827578	36	+	.	ID=SEQF1494.1|CP000829.1_1_REPEAT5;Parent=SEQF1494.1|CP000829.1_1;Note=GTTTTAGAGCTATGCTGTCTTGAATGGTCTCCATTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1494.1|CP000829.1	CCTyper	repeat_region	1201584	1201948	365	+	.	ID=SEQF1494.1|CP000829.1_2;Genome_ID=SEQF1494.1;Note=Predictor:CCtyper;Start:1201584;End:1201948;Consensus_Repeat:ATTTCAATCCACTCACCCATGAAGGGTGAGAC;Number_of_Repeats:6;Repeat_Length:32;Average_Spacer_Length:34.6;Repeat_Identity:96.0;Spacer_Identity:41.9;Spacer_Length_Sem:0.4;Trusted:True;Cas_Type_Prediction: I-C;Cas_Subtype_Prediction:I-C;Subtype_Probability:0.995;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1494.1|CP000829.1	CCTyper	direct_repeat	1201584	1201615	32	+	.	ID=SEQF1494.1|CP000829.1_2_REPEAT1;Parent=SEQF1494.1|CP000829.1_2;Note=CTTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1494.1|CP000829.1	CCTyper	binding_site	1201616	1201650	35	+	.	ID=SEQF1494.1|CP000829.1_2_SPACER1;Parent=SEQF1494.1|CP000829.1_2;Note=AAGATGACACTGGTACTGCACATGTCGATTTAAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1494.1|CP000829.1	CCTyper	direct_repeat	1201651	1201682	32	+	.	ID=SEQF1494.1|CP000829.1_2_REPEAT2;Parent=SEQF1494.1|CP000829.1_2;Note=ATTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1494.1|CP000829.1	CCTyper	binding_site	1201683	1201717	35	+	.	ID=SEQF1494.1|CP000829.1_2_SPACER2;Parent=SEQF1494.1|CP000829.1_2;Note=AGATCTTAAAATGGATTCTTCTTCAGATATTTTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1494.1|CP000829.1	CCTyper	direct_repeat	1201718	1201749	32	+	.	ID=SEQF1494.1|CP000829.1_2_REPEAT3;Parent=SEQF1494.1|CP000829.1_2;Note=ATTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1494.1|CP000829.1	CCTyper	binding_site	1201750	1201784	35	+	.	ID=SEQF1494.1|CP000829.1_2_SPACER3;Parent=SEQF1494.1|CP000829.1_2;Note=GATAACAGTTGCTTTAGTCGATAAGTCGATTAGCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1494.1|CP000829.1	CCTyper	direct_repeat	1201785	1201816	32	+	.	ID=SEQF1494.1|CP000829.1_2_REPEAT4;Parent=SEQF1494.1|CP000829.1_2;Note=ATTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1494.1|CP000829.1	CCTyper	binding_site	1201817	1201851	35	+	.	ID=SEQF1494.1|CP000829.1_2_SPACER4;Parent=SEQF1494.1|CP000829.1_2;Note=ATTATGTTTTGCCACATGAGAAAGTAAAAAATGGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1494.1|CP000829.1	CCTyper	direct_repeat	1201852	1201883	32	+	.	ID=SEQF1494.1|CP000829.1_2_REPEAT5;Parent=SEQF1494.1|CP000829.1_2;Note=ATTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1494.1|CP000829.1	CCTyper	binding_site	1201884	1201916	33	+	.	ID=SEQF1494.1|CP000829.1_2_SPACER5;Parent=SEQF1494.1|CP000829.1_2;Note=TCCCTTATAATCGACAAAAAGCGCCGATTGATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1494.1|CP000829.1	CCTyper	direct_repeat	1201917	1201948	32	+	.	ID=SEQF1494.1|CP000829.1_2_REPEAT6;Parent=SEQF1494.1|CP000829.1_2;Note=ATTTCAATCCACTCACCCACGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1494.1|CP000829.1	CCTyper	OPERON	821210	827175	5966	+	.	ID=SEQF1494.1|CP000829.1@16;Genome_ID=SEQF1494.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Cas9_1_II,Cas1_4_CAS-I-II-III-IV-V-VI,Cas2_5_CAS-I-II-III-IV-V-VI,Csn2_1_CAS-II-A;Positions=787,788,789,790;E-values=0.00e+00,2.30e-103,1.50e-50,2.30e-108;CoverageSeq=0.996,0.928,0.99,0.982;CoverageHMM=1.0,0.996,0.905,0.995;Strand_Interference=1;Strand_Adaptation=1
SEQF1494.1|CP000829.1	CCTyper	OPERON	1202097	1210116	8020	-	.	ID=SEQF1494.1|CP000829.1@23;Genome_ID=SEQF1494.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-C;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=I-C;Best_score=21.0;Genes=Cas2_4_CAS-I-II-III-IV-V-VI,Cas1_0_IC,Cas4_0_I-II,Cas7_2_CAS-I-C,Cas8c_0_IC,Cas5_0_IC,Cas3_1_CAS-I;Positions=1152,1153,1154,1155,1156,1157,1158;E-values=3.40e-33,5.20e-148,5.20e-36,1.60e-148,1.60e-177,1.80e-101,2.20e-150;CoverageSeq=0.939,0.991,0.84,0.993,0.979,0.831,0.934;CoverageHMM=0.989,1.0,0.983,0.989,0.998,1.0,0.995;Strand_Interference=-1;Strand_Adaptation=-1
SEQF1494.1|CP000829.1	CCTyper	CDS	1202401	1203426	342	-	.	ID=SEQF1494.1|CP000829.1_1153_cas;Genome_ID=SEQF1494.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IC;coding_strand=-;E-value=5.1999999999999995e-148;Score=489.3;Coverage_Seq=0.9912280701754386;Coverage_Hmm=1.0
SEQF1494.1|CP000829.1	CCTyper	CDS	825316	826185	290	+	.	ID=SEQF1494.1|CP000829.1_788_cas;Genome_ID=SEQF1494.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=2.3e-103;Score=341.8;Coverage_Seq=0.9275862068965517;Coverage_Hmm=0.9963636363636363
SEQF1494.1|CP000829.1	CCTyper	CDS	1202097	1202390	98	-	.	ID=SEQF1494.1|CP000829.1_1152_cas;Genome_ID=SEQF1494.1;Feature_type=CDS;Product=Cas Prediction : Cas2_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=3.4e-33;Score=110.6;Coverage_Seq=0.9387755102040817;Coverage_Hmm=0.9887640449438202
SEQF1494.1|CP000829.1	CCTyper	CDS	826212	826523	104	+	.	ID=SEQF1494.1|CP000829.1_789_cas;Genome_ID=SEQF1494.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.5e-50;Score=167.0;Coverage_Seq=0.9903846153846154;Coverage_Hmm=0.9051724137931034
SEQF1494.1|CP000829.1	CCTyper	CDS	1207708	1210116	803	-	.	ID=SEQF1494.1|CP000829.1_1158_cas;Genome_ID=SEQF1494.1;Feature_type=CDS;Product=Cas Prediction : Cas3_1_CAS-I;coding_strand=-;E-value=2.2e-150;Score=499.0;Coverage_Seq=0.933997509339975;Coverage_Hmm=0.9946308724832215
SEQF1494.1|CP000829.1	CCTyper	CDS	1203423	1204097	225	-	.	ID=SEQF1494.1|CP000829.1_1154_cas;Genome_ID=SEQF1494.1;Feature_type=CDS;Product=Cas Prediction : Cas4_0_I-II;coding_strand=-;E-value=5.2e-36;Score=120.8;Coverage_Seq=0.84;Coverage_Hmm=0.9833333333333333
SEQF1494.1|CP000829.1	CCTyper	CDS	1206847	1207575	243	-	.	ID=SEQF1494.1|CP000829.1_1157_cas;Genome_ID=SEQF1494.1;Feature_type=CDS;Product=Cas Prediction : Cas5_0_IC;coding_strand=-;E-value=1.8e-101;Score=335.1;Coverage_Seq=0.831275720164609;Coverage_Hmm=1.0
SEQF1494.1|CP000829.1	CCTyper	CDS	1204099	1204947	283	-	.	ID=SEQF1494.1|CP000829.1_1155_cas;Genome_ID=SEQF1494.1;Feature_type=CDS;Product=Cas Prediction : Cas7_2_CAS-I-C;coding_strand=-;E-value=1.6e-148;Score=490.2;Coverage_Seq=0.9929328621908127;Coverage_Hmm=0.9893992932862191
SEQF1494.1|CP000829.1	CCTyper	CDS	1204952	1206847	632	-	.	ID=SEQF1494.1|CP000829.1_1156_cas;Genome_ID=SEQF1494.1;Feature_type=CDS;Product=Cas Prediction : Cas8c_0_IC;coding_strand=-;E-value=1.6e-177;Score=588.2;Coverage_Seq=0.9794303797468354;Coverage_Hmm=0.9982993197278912
SEQF1494.1|CP000829.1	CCTyper	CDS	821210	825316	1369	+	.	ID=SEQF1494.1|CP000829.1_787_cas;Genome_ID=SEQF1494.1;Feature_type=CDS;Product=Cas Prediction : Cas9_1_II;coding_strand=+;E-value=0.0;Score=1662.2;Coverage_Seq=0.9963476990504018;Coverage_Hmm=1.0
SEQF1494.1|CP000829.1	CCTyper	CDS	826513	827175	221	+	.	ID=SEQF1494.1|CP000829.1_790_cas;Genome_ID=SEQF1494.1;Feature_type=CDS;Product=Cas Prediction : Csn2_1_CAS-II-A;coding_strand=+;E-value=2.3e-108;Score=357.5;Coverage_Seq=0.9819004524886877;Coverage_Hmm=0.9954128440366973