SEQF1607.1|GG668534.1	CCTyper	repeat_region	5906	7324	1419	+	.	ID=SEQF1607.1|GG668534.1_1;Genome_ID=SEQF1607.1;Note=Predictor:CCtyper;Start:5906;End:7324;Consensus_Repeat:GTTTTACTCTCTTCTGAATTAACAAAGCTCTCAAAC;Number_of_Repeats:22;Repeat_Length:36;Average_Spacer_Length:29.9;Repeat_Identity:97.9;Spacer_Identity:39.5;Spacer_Length_Sem:0.1;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.997;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1607.1|GG668534.1	CCTyper	direct_repeat	5906	5941	36	+	.	ID=SEQF1607.1|GG668534.1_1_REPEAT1;Parent=SEQF1607.1|GG668534.1_1;Note=ATTTTACATTCTTCTGAATTAACAAAGCTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1607.1|GG668534.1	CCTyper	binding_site	5942	5971	30	+	.	ID=SEQF1607.1|GG668534.1_1_SPACER1;Parent=SEQF1607.1|GG668534.1_1;Note=GACAAGCTTGATTTATCTATCAACGAGTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1607.1|GG668534.1	CCTyper	direct_repeat	5972	6007	36	+	.	ID=SEQF1607.1|GG668534.1_1_REPEAT2;Parent=SEQF1607.1|GG668534.1_1;Note=GTTTTACTCTCTTCTGAATTAACAAAGCTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1607.1|GG668534.1	CCTyper	binding_site	6008	6037	30	+	.	ID=SEQF1607.1|GG668534.1_1_SPACER2;Parent=SEQF1607.1|GG668534.1_1;Note=ATAAACCCACATTTCAGTTTCAACTTCCTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1607.1|GG668534.1	CCTyper	direct_repeat	6038	6073	36	+	.	ID=SEQF1607.1|GG668534.1_1_REPEAT3;Parent=SEQF1607.1|GG668534.1_1;Note=GTTTTACTCTCTTCTGAATTAACAAAGCTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1607.1|GG668534.1	CCTyper	binding_site	6074	6103	30	+	.	ID=SEQF1607.1|GG668534.1_1_SPACER3;Parent=SEQF1607.1|GG668534.1_1;Note=GCAGCGTTGCAAGGAACTTGAGCAGCGGAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1607.1|GG668534.1	CCTyper	direct_repeat	6104	6139	36	+	.	ID=SEQF1607.1|GG668534.1_1_REPEAT4;Parent=SEQF1607.1|GG668534.1_1;Note=GTTTTACTCTCTTCTGAATTAACAAAGCTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1607.1|GG668534.1	CCTyper	binding_site	6140	6169	30	+	.	ID=SEQF1607.1|GG668534.1_1_SPACER4;Parent=SEQF1607.1|GG668534.1_1;Note=CTGGAAGAGGCTGGGGGTAGAGGGGGCAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1607.1|GG668534.1	CCTyper	direct_repeat	6170	6205	36	+	.	ID=SEQF1607.1|GG668534.1_1_REPEAT5;Parent=SEQF1607.1|GG668534.1_1;Note=GTTTTACTCTCTTCTGAATTAACAAAGCTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1607.1|GG668534.1	CCTyper	binding_site	6206	6235	30	+	.	ID=SEQF1607.1|GG668534.1_1_SPACER5;Parent=SEQF1607.1|GG668534.1_1;Note=ATAAAGGAGACCATGAGAGACTAGCCGGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1607.1|GG668534.1	CCTyper	direct_repeat	6236	6271	36	+	.	ID=SEQF1607.1|GG668534.1_1_REPEAT6;Parent=SEQF1607.1|GG668534.1_1;Note=GTTTTACTCTCTTCTGAATTAACAAAGCTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1607.1|GG668534.1	CCTyper	binding_site	6272	6300	29	+	.	ID=SEQF1607.1|GG668534.1_1_SPACER6;Parent=SEQF1607.1|GG668534.1_1;Note=CATCGCACATACCACAGTTTTTTATCTCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1607.1|GG668534.1	CCTyper	direct_repeat	6301	6336	36	+	.	ID=SEQF1607.1|GG668534.1_1_REPEAT7;Parent=SEQF1607.1|GG668534.1_1;Note=GTTTTACTCTCTTCTGAATTAACAAAGCTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1607.1|GG668534.1	CCTyper	binding_site	6337	6365	29	+	.	ID=SEQF1607.1|GG668534.1_1_SPACER7;Parent=SEQF1607.1|GG668534.1_1;Note=CTGCAAATTATTTACTAGCCCCTTAAATG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1607.1|GG668534.1	CCTyper	direct_repeat	6366	6401	36	+	.	ID=SEQF1607.1|GG668534.1_1_REPEAT8;Parent=SEQF1607.1|GG668534.1_1;Note=GTTTTACTCTCTTCTGAATTAACAAAGCTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1607.1|GG668534.1	CCTyper	binding_site	6402	6431	30	+	.	ID=SEQF1607.1|GG668534.1_1_SPACER8;Parent=SEQF1607.1|GG668534.1_1;Note=AATGCCGGAGTCATCTCTAAACAAATCTCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1607.1|GG668534.1	CCTyper	direct_repeat	6432	6467	36	+	.	ID=SEQF1607.1|GG668534.1_1_REPEAT9;Parent=SEQF1607.1|GG668534.1_1;Note=GTTTTACTCTCTTCTGAATTAACAAAGCTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1607.1|GG668534.1	CCTyper	binding_site	6468	6497	30	+	.	ID=SEQF1607.1|GG668534.1_1_SPACER9;Parent=SEQF1607.1|GG668534.1_1;Note=GAAACTTGTAGAGATTTCGATATGGTTGTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1607.1|GG668534.1	CCTyper	direct_repeat	6498	6533	36	+	.	ID=SEQF1607.1|GG668534.1_1_REPEAT10;Parent=SEQF1607.1|GG668534.1_1;Note=GTTTTACTCTCTTCTGAATTAACAAAGCTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1607.1|GG668534.1	CCTyper	binding_site	6534	6563	30	+	.	ID=SEQF1607.1|GG668534.1_1_SPACER10;Parent=SEQF1607.1|GG668534.1_1;Note=CATTATCAACTCTTTGTCCTTTAAAAACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1607.1|GG668534.1	CCTyper	direct_repeat	6564	6599	36	+	.	ID=SEQF1607.1|GG668534.1_1_REPEAT11;Parent=SEQF1607.1|GG668534.1_1;Note=GTTTTACTCTCTTCTGAATTAACAAAGCTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1607.1|GG668534.1	CCTyper	binding_site	6600	6629	30	+	.	ID=SEQF1607.1|GG668534.1_1_SPACER11;Parent=SEQF1607.1|GG668534.1_1;Note=CCTTCATGGAAGCGGATATTGCTAGGGAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1607.1|GG668534.1	CCTyper	direct_repeat	6630	6665	36	+	.	ID=SEQF1607.1|GG668534.1_1_REPEAT12;Parent=SEQF1607.1|GG668534.1_1;Note=GTTTTACTCTCTTCTGAATTAACAAAGCTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1607.1|GG668534.1	CCTyper	binding_site	6666	6694	29	+	.	ID=SEQF1607.1|GG668534.1_1_SPACER12;Parent=SEQF1607.1|GG668534.1_1;Note=ACCCCCTCCCAATATCACGCCTTTGCTCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1607.1|GG668534.1	CCTyper	direct_repeat	6695	6730	36	+	.	ID=SEQF1607.1|GG668534.1_1_REPEAT13;Parent=SEQF1607.1|GG668534.1_1;Note=GTTTTACTCTCTTCTGAATTAACAAAGCTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1607.1|GG668534.1	CCTyper	binding_site	6731	6760	30	+	.	ID=SEQF1607.1|GG668534.1_1_SPACER13;Parent=SEQF1607.1|GG668534.1_1;Note=TCCGTGATGGAGAGCCATTAGGAGGAGTAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1607.1|GG668534.1	CCTyper	direct_repeat	6761	6796	36	+	.	ID=SEQF1607.1|GG668534.1_1_REPEAT14;Parent=SEQF1607.1|GG668534.1_1;Note=GTTTTACTCTCTTCTGAATTAACAAAGCTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1607.1|GG668534.1	CCTyper	binding_site	6797	6827	31	+	.	ID=SEQF1607.1|GG668534.1_1_SPACER14;Parent=SEQF1607.1|GG668534.1_1;Note=AATAATTATGCTGAACAGAGTATCGGTGCTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1607.1|GG668534.1	CCTyper	direct_repeat	6828	6863	36	+	.	ID=SEQF1607.1|GG668534.1_1_REPEAT15;Parent=SEQF1607.1|GG668534.1_1;Note=GTTTTACTCTCTTCTGAATTAACAAAGCTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1607.1|GG668534.1	CCTyper	binding_site	6864	6893	30	+	.	ID=SEQF1607.1|GG668534.1_1_SPACER15;Parent=SEQF1607.1|GG668534.1_1;Note=GCCCACAAGAAGGGCAAAAATCGAACATAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1607.1|GG668534.1	CCTyper	direct_repeat	6894	6929	36	+	.	ID=SEQF1607.1|GG668534.1_1_REPEAT16;Parent=SEQF1607.1|GG668534.1_1;Note=GTTTTACTCTCTTCTGAATTAACAAAGCTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1607.1|GG668534.1	CCTyper	binding_site	6930	6959	30	+	.	ID=SEQF1607.1|GG668534.1_1_SPACER16;Parent=SEQF1607.1|GG668534.1_1;Note=CAAGAATGGCATCAAAGTTATTGAGTTTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1607.1|GG668534.1	CCTyper	direct_repeat	6960	6995	36	+	.	ID=SEQF1607.1|GG668534.1_1_REPEAT17;Parent=SEQF1607.1|GG668534.1_1;Note=GTTTTACTCTCTTCTGAATTAACAAAGTTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1607.1|GG668534.1	CCTyper	binding_site	6996	7026	31	+	.	ID=SEQF1607.1|GG668534.1_1_SPACER17;Parent=SEQF1607.1|GG668534.1_1;Note=TCTTTCGTGTGTTTTTAATTACCTTAATGCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1607.1|GG668534.1	CCTyper	direct_repeat	7027	7062	36	+	.	ID=SEQF1607.1|GG668534.1_1_REPEAT18;Parent=SEQF1607.1|GG668534.1_1;Note=GTTTTACTCTCTTCTGAATTAACAAAGCTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1607.1|GG668534.1	CCTyper	binding_site	7063	7092	30	+	.	ID=SEQF1607.1|GG668534.1_1_SPACER18;Parent=SEQF1607.1|GG668534.1_1;Note=CAAAGGCCGCGAGGGATGCCGTTGCACTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1607.1|GG668534.1	CCTyper	direct_repeat	7093	7128	36	+	.	ID=SEQF1607.1|GG668534.1_1_REPEAT19;Parent=SEQF1607.1|GG668534.1_1;Note=GTTTTACTCTCTTCTGAATTAACAAAGCTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1607.1|GG668534.1	CCTyper	binding_site	7129	7157	29	+	.	ID=SEQF1607.1|GG668534.1_1_SPACER19;Parent=SEQF1607.1|GG668534.1_1;Note=ACTTGCCTATGCCCACCCTCTGATGCTGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1607.1|GG668534.1	CCTyper	direct_repeat	7158	7193	36	+	.	ID=SEQF1607.1|GG668534.1_1_REPEAT20;Parent=SEQF1607.1|GG668534.1_1;Note=GTTTTACTCTCTTCTGAATTAACAAAGCTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1607.1|GG668534.1	CCTyper	binding_site	7194	7222	29	+	.	ID=SEQF1607.1|GG668534.1_1_SPACER20;Parent=SEQF1607.1|GG668534.1_1;Note=CTTTTGTTAAAAAAGCAATCTTTTTATAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1607.1|GG668534.1	CCTyper	direct_repeat	7223	7258	36	+	.	ID=SEQF1607.1|GG668534.1_1_REPEAT21;Parent=SEQF1607.1|GG668534.1_1;Note=GTTTTACTCTCTTCTGAATTAACAAAGCTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1607.1|GG668534.1	CCTyper	binding_site	7259	7288	30	+	.	ID=SEQF1607.1|GG668534.1_1_SPACER21;Parent=SEQF1607.1|GG668534.1_1;Note=CTCGATAGTGTCAATATAATTTTCGTCAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1607.1|GG668534.1	CCTyper	direct_repeat	7289	7324	36	+	.	ID=SEQF1607.1|GG668534.1_1_REPEAT22;Parent=SEQF1607.1|GG668534.1_1;Note=GTTTTACTCTCTTCTGAATTAACAAAGCTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1607.1|GG668534.1	CCTyper	OPERON	7383	13171	5789	-	.	ID=SEQF1607.1|GG668534.1@2;Genome_ID=SEQF1607.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Csn2_0_CAS-II-A,Csn2_0_CAS-II-A,Cas2_9_CAS-I-II-III-IV-V-VI,Cas1_4_CAS-I-II-III-IV-V-VI,Cas1_4_CAS-I-II-III-IV-V-VI,Cas9_0_II,Cas9_0_II;Positions=9,10,11,12,13,14,15;E-values=5.30e-23,1.20e-27,7.50e-36,5.20e-51,1.80e-34,7.00e-75,4.50e-90;CoverageSeq=0.931,0.991,0.99,0.865,0.92,0.476,0.922;CoverageHMM=0.426,0.511,1.0,0.527,0.422,0.366,0.542;Strand_Interference=-1;Strand_Adaptation=-1
SEQF1607.1|GG668534.1	CCTyper	CDS	8364	8852	163	-	.	ID=SEQF1607.1|GG668534.1_12_cas;Genome_ID=SEQF1607.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=5.2e-51;Score=170.6;Coverage_Seq=0.8650306748466258;Coverage_Hmm=0.5272727272727272
SEQF1607.1|GG668534.1	CCTyper	CDS	8863	9237	125	-	.	ID=SEQF1607.1|GG668534.1_13_cas;Genome_ID=SEQF1607.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.8e-34;Score=116.3;Coverage_Seq=0.92;Coverage_Hmm=0.4218181818181818
SEQF1607.1|GG668534.1	CCTyper	CDS	8054	8359	102	-	.	ID=SEQF1607.1|GG668534.1_11_cas;Genome_ID=SEQF1607.1;Feature_type=CDS;Product=Cas Prediction : Cas2_9_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=7.5e-36;Score=119.6;Coverage_Seq=0.9901960784313726;Coverage_Hmm=1.0
SEQF1607.1|GG668534.1	CCTyper	CDS	9249	11144	632	-	.	ID=SEQF1607.1|GG668534.1_14_cas;Genome_ID=SEQF1607.1;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=-;E-value=7.000000000000001e-75;Score=250.0;Coverage_Seq=0.4762658227848101;Coverage_Hmm=0.36626506024096384
SEQF1607.1|GG668534.1	CCTyper	CDS	11141	13171	677	-	.	ID=SEQF1607.1|GG668534.1_15_cas;Genome_ID=SEQF1607.1;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=-;E-value=4.499999999999999e-90;Score=300.3;Coverage_Seq=0.9217134416543574;Coverage_Hmm=0.5421686746987951
SEQF1607.1|GG668534.1	CCTyper	CDS	7716	8057	114	-	.	ID=SEQF1607.1|GG668534.1_10_cas;Genome_ID=SEQF1607.1;Feature_type=CDS;Product=Cas Prediction : Csn2_0_CAS-II-A;coding_strand=-;E-value=1.2e-27;Score=94.0;Coverage_Seq=0.9912280701754386;Coverage_Hmm=0.5112107623318386
SEQF1607.1|GG668534.1	CCTyper	CDS	7383	7685	101	-	.	ID=SEQF1607.1|GG668534.1_9_cas;Genome_ID=SEQF1607.1;Feature_type=CDS;Product=Cas Prediction : Csn2_0_CAS-II-A;coding_strand=-;E-value=5.3e-23;Score=78.8;Coverage_Seq=0.9306930693069307;Coverage_Hmm=0.4260089686098655