SEQF1618.1|KI271421.1	CCTyper	repeat_region	63701	64006	306	+	.	ID=SEQF1618.1|KI271421.1_1;Genome_ID=SEQF1618.1;Note=Predictor:CCtyper;Start:63701;End:64006;Consensus_Repeat:AAGTTTTAGTCCCCTTCGTTTTTGGGGTAGTCTAAATC;Number_of_Repeats:5;Repeat_Length:38.0;Average_Spacer_Length:29.0;Repeat_Identity:72.4;Spacer_Identity:39.7;Spacer_Length_Sem:0.4;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:VI-A;Subtype_Probability:0.479;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1618.1|KI271421.1	CCTyper	direct_repeat	63701	63738	38	+	.	ID=SEQF1618.1|KI271421.1_1_REPEAT1;Parent=SEQF1618.1|KI271421.1_1;Note=TATATTTCAGTACTTTTCATTTTTAGGTAGTCTAAATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1618.1|KI271421.1	CCTyper	binding_site	63739	63767	29	+	.	ID=SEQF1618.1|KI271421.1_1_SPACER1;Parent=SEQF1618.1|KI271421.1_1;Note=AGAAATGGTTTTGTCTAAATGATGTATGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1618.1|KI271421.1	CCTyper	direct_repeat	63768	63805	38	+	.	ID=SEQF1618.1|KI271421.1_1_REPEAT2;Parent=SEQF1618.1|KI271421.1_1;Note=AAGTTTTAGTCCCCTTCGTTTTTGGGGTAGTCTAAATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1618.1|KI271421.1	CCTyper	binding_site	63806	63835	30	+	.	ID=SEQF1618.1|KI271421.1_1_SPACER2;Parent=SEQF1618.1|KI271421.1_1;Note=CTGGTAAACCAATCCACATCGAAGAAAAGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1618.1|KI271421.1	CCTyper	direct_repeat	63836	63873	38	+	.	ID=SEQF1618.1|KI271421.1_1_REPEAT3;Parent=SEQF1618.1|KI271421.1_1;Note=AAGTTTTAGTCCCCTTCGTTTTTGGGGTAGTCTAAATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1618.1|KI271421.1	CCTyper	binding_site	63874	63901	28	+	.	ID=SEQF1618.1|KI271421.1_1_SPACER3;Parent=SEQF1618.1|KI271421.1_1;Note=ATGTAGAAGAAGTTATTGTATCTATTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1618.1|KI271421.1	CCTyper	direct_repeat	63902	63939	38	+	.	ID=SEQF1618.1|KI271421.1_1_REPEAT4;Parent=SEQF1618.1|KI271421.1_1;Note=ACGTTTTAGTCCCCTTCGTTTTTGGGGTAGTCTAAATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1618.1|KI271421.1	CCTyper	binding_site	63940	63968	29	+	.	ID=SEQF1618.1|KI271421.1_1_SPACER4;Parent=SEQF1618.1|KI271421.1_1;Note=TTTATATCAATTCTTGCATCAAGCTCCAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1618.1|KI271421.1	CCTyper	direct_repeat	63969	64006	38	+	.	ID=SEQF1618.1|KI271421.1_1_REPEAT5;Parent=SEQF1618.1|KI271421.1_1;Note=AAGTTTTAGTCCCCTTCGTTTTTAGGGTAGTNNNNNNN;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1618.1|KI271421.1	CCTyper	repeat_region	64094	64331	238	+	.	ID=SEQF1618.1|KI271421.1_2;Genome_ID=SEQF1618.1;Note=Predictor:CCtyper;Start:64094;End:64331;Consensus_Repeat:GTTTTAGTCCCCTTCGTTTTTAGGGTAGTCTAAATC;Number_of_Repeats:4;Repeat_Length:36.0;Average_Spacer_Length:31.3;Repeat_Identity:70.8;Spacer_Identity:40.5;Spacer_Length_Sem:0.3;Trusted:True;Cas_Type_Prediction: VI-A;Cas_Subtype_Prediction:VI-A;Subtype_Probability:0.938;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1618.1|KI271421.1	CCTyper	direct_repeat	64094	64129	36	+	.	ID=SEQF1618.1|KI271421.1_2_REPEAT1;Parent=SEQF1618.1|KI271421.1_2;Note=NNNNNNGTCCCCTTCGTTTTTAGGGTAGTCTAAATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1618.1|KI271421.1	CCTyper	binding_site	64130	64160	31	+	.	ID=SEQF1618.1|KI271421.1_2_SPACER1;Parent=SEQF1618.1|KI271421.1_2;Note=AATCTCTTTCAATCTAAATGAATTATATCAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1618.1|KI271421.1	CCTyper	direct_repeat	64161	64196	36	+	.	ID=SEQF1618.1|KI271421.1_2_REPEAT2;Parent=SEQF1618.1|KI271421.1_2;Note=GTTTTAGTCCCCTTCGTTTTTAGGGTAGTCTAAATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1618.1|KI271421.1	CCTyper	binding_site	64197	64227	31	+	.	ID=SEQF1618.1|KI271421.1_2_SPACER2;Parent=SEQF1618.1|KI271421.1_2;Note=TATTTTAAGCGTATCTAGGCTTACTCTTTCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1618.1|KI271421.1	CCTyper	direct_repeat	64228	64263	36	+	.	ID=SEQF1618.1|KI271421.1_2_REPEAT3;Parent=SEQF1618.1|KI271421.1_2;Note=GTTTTAGTCCCCTTCGTTTTTAGGGTAGTCTAAATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1618.1|KI271421.1	CCTyper	binding_site	64264	64295	32	+	.	ID=SEQF1618.1|KI271421.1_2_SPACER3;Parent=SEQF1618.1|KI271421.1_2;Note=AACCTAGAAGATGCAGAACAATGGGCTGTAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1618.1|KI271421.1	CCTyper	direct_repeat	64296	64331	36	+	.	ID=SEQF1618.1|KI271421.1_2_REPEAT4;Parent=SEQF1618.1|KI271421.1_2;Note=GTTTTAGTCCCCTTCGTTTTTAGGGTAGTNNNNNNN;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1618.1|KI271395.1	CCTyper	repeat_region	24602	24774	173	+	.	ID=SEQF1618.1|KI271395.1-1_3;Genome_ID=SEQF1618.1;Note=Predictor:CCtyper;Start:24602;End:24774;Consensus_Repeat:AGTTTTAGTCCCCTTCGATATTGGGGTGGTCTATATC;Number_of_Repeats:3;Repeat_Length:37.7;Average_Spacer_Length:30.0;Repeat_Identity:78.9;Spacer_Identity:36.4;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: VI-A;Cas_Subtype_Prediction:VI-A;Subtype_Probability:0.999;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1618.1|KI271395.1	CCTyper	direct_repeat	24602	24639	38	+	.	ID=SEQF1618.1|KI271395.1-1_3_REPEAT1;Parent=SEQF1618.1|KI271395.1-1_3;Note=ATTAAATATCACTTTTCGATATCGGGGTGGTCTATATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1618.1|KI271395.1	CCTyper	binding_site	24640	24669	30	+	.	ID=SEQF1618.1|KI271395.1-1_3_SPACER1;Parent=SEQF1618.1|KI271395.1-1_3;Note=CAAGATAATACAACATTAGGACTTTATTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1618.1|KI271395.1	CCTyper	direct_repeat	24670	24707	38	+	.	ID=SEQF1618.1|KI271395.1-1_3_REPEAT2;Parent=SEQF1618.1|KI271395.1-1_3;Note=AGTTTTAGTCCCCTTCGATATTGGGGTGGTCTATATCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1618.1|KI271395.1	CCTyper	binding_site	24708	24737	30	+	.	ID=SEQF1618.1|KI271395.1-1_3_SPACER2;Parent=SEQF1618.1|KI271395.1-1_3;Note=TAAAAAGCTTTTCTTCTAACAGGGGGGAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1618.1|KI271395.1	CCTyper	direct_repeat	24738	24774	37	+	.	ID=SEQF1618.1|KI271395.1-1_3_REPEAT3;Parent=SEQF1618.1|KI271395.1-1_3;Note=AGTTTTAGTCCCCTTCGATATTGGGGTGGTCTATATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1618.1|KI271424.1	CCTyper	OPERON	222711	227554	4844	-	.	ID=SEQF1618.1|KI271424.1@6;Genome_ID=SEQF1618.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type VI-A;Complete_Interference=100%;Complete_Adaptation=NA;Best_type=VI-A;Best_score=5.0;Genes=Cas2_9_CAS-I-II-III-IV-V-VI,Cas1_0_II,Cas13a_0_CAS-VI-A;Positions=210,211,212;E-values=1.00e-23,1.40e-75,6.20e-40;CoverageSeq=0.787,0.908,0.368;CoverageHMM=0.842,0.986,1.0;Strand_Interference=-1;Strand_Adaptation=NA
SEQF1618.1|KI271395.1	CCTyper	OPERON	24883	29661	4779	-	.	ID=SEQF1618.1|KI271395.1@1;Genome_ID=SEQF1618.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type VI-A;Complete_Interference=100%;Complete_Adaptation=NA;Best_type=VI-A;Best_score=5.0;Genes=Cas2_9_CAS-I-II-III-IV-V-VI,Cas1_0_II,Cas13a_0_VIA;Positions=25,26,27;E-values=1.80e-22,4.10e-76,5.20e-44;CoverageSeq=0.84,0.915,0.465;CoverageHMM=0.881,0.989,1.0;Strand_Interference=-1;Strand_Adaptation=NA
SEQF1618.1|KI271421.1	CCTyper	OPERON	64576	69272	4697	-	.	ID=SEQF1618.1|KI271421.1@2;Genome_ID=SEQF1618.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type VI-A;Complete_Interference=100%;Complete_Adaptation=NA;Best_type=VI-A;Best_score=5.0;Genes=Cas2_5_CAS-I-II-III-IV-V-VI,Cas1_0_II,Cas13a_0_CAS-VI-A;Positions=53,54,55;E-values=2.10e-23,6.80e-75,2.60e-43;CoverageSeq=0.898,0.908,0.363;CoverageHMM=0.836,0.986,1.0;Strand_Interference=-1;Strand_Adaptation=NA
SEQF1618.1|KI271421.1	CCTyper	CDS	65814	69272	1153	-	.	ID=SEQF1618.1|KI271421.1_55_cas;Genome_ID=SEQF1618.1;Feature_type=CDS;Product=Cas Prediction : Cas13a_0_CAS-VI-A;coding_strand=-;E-value=2.5999999999999996e-43;Score=145.1;Coverage_Seq=0.3633998265394623;Coverage_Hmm=1.0
SEQF1618.1|KI271424.1	CCTyper	CDS	223961	227554	1198	-	.	ID=SEQF1618.1|KI271424.1_212_cas;Genome_ID=SEQF1618.1;Feature_type=CDS;Product=Cas Prediction : Cas13a_0_CAS-VI-A;coding_strand=-;E-value=6.2e-40;Score=134.1;Coverage_Seq=0.36811352253756263;Coverage_Hmm=1.0
SEQF1618.1|KI271395.1	CCTyper	CDS	26119	29661	1181	-	.	ID=SEQF1618.1|KI271395.1_27_cas;Genome_ID=SEQF1618.1;Feature_type=CDS;Product=Cas Prediction : Cas13a_0_VIA;coding_strand=-;E-value=5.200000000000001e-44;Score=147.5;Coverage_Seq=0.46486028789161726;Coverage_Hmm=1.0
SEQF1618.1|KI271395.1	CCTyper	CDS	25190	26104	305	-	.	ID=SEQF1618.1|KI271395.1_26_cas;Genome_ID=SEQF1618.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_II;coding_strand=-;E-value=4.1e-76;Score=252.9;Coverage_Seq=0.9147540983606557;Coverage_Hmm=0.9892086330935251
SEQF1618.1|KI271421.1	CCTyper	CDS	64889	65800	304	-	.	ID=SEQF1618.1|KI271421.1_54_cas;Genome_ID=SEQF1618.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_II;coding_strand=-;E-value=6.799999999999999e-75;Score=248.9;Coverage_Seq=0.9078947368421053;Coverage_Hmm=0.9856115107913669
SEQF1618.1|KI271424.1	CCTyper	CDS	223024	223941	306	-	.	ID=SEQF1618.1|KI271424.1_211_cas;Genome_ID=SEQF1618.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_II;coding_strand=-;E-value=1.4e-75;Score=251.1;Coverage_Seq=0.9084967320261438;Coverage_Hmm=0.9856115107913669
SEQF1618.1|KI271421.1	CCTyper	CDS	64576	64899	108	-	.	ID=SEQF1618.1|KI271421.1_53_cas;Genome_ID=SEQF1618.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=2.1e-23;Score=79.8;Coverage_Seq=0.8981481481481481;Coverage_Hmm=0.8362068965517241
SEQF1618.1|KI271395.1	CCTyper	CDS	24883	25200	106	-	.	ID=SEQF1618.1|KI271395.1_25_cas;Genome_ID=SEQF1618.1;Feature_type=CDS;Product=Cas Prediction : Cas2_9_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.8000000000000001e-22;Score=76.5;Coverage_Seq=0.839622641509434;Coverage_Hmm=0.8811881188118812
SEQF1618.1|KI271424.1	CCTyper	CDS	222711	223034	108	-	.	ID=SEQF1618.1|KI271424.1_210_cas;Genome_ID=SEQF1618.1;Feature_type=CDS;Product=Cas Prediction : Cas2_9_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.0000000000000001e-23;Score=80.5;Coverage_Seq=0.7870370370370371;Coverage_Hmm=0.8415841584158416