SEQF1736.1|GG668756.1	CCTyper	repeat_region	344413	345042	630	+	.	ID=SEQF1736.1|GG668756.1_1;Genome_ID=SEQF1736.1;Note=Predictor:CCtyper;Start:344413;End:345042;Consensus_Repeat:GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC;Number_of_Repeats:10;Repeat_Length:36;Average_Spacer_Length:30;Repeat_Identity:94.3;Spacer_Identity:42.0;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.999;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1736.1|GG668756.1	CCTyper	direct_repeat	344413	344448	36	+	.	ID=SEQF1736.1|GG668756.1_1_REPEAT1;Parent=SEQF1736.1|GG668756.1_1;Note=GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1736.1|GG668756.1	CCTyper	binding_site	344449	344478	30	+	.	ID=SEQF1736.1|GG668756.1_1_SPACER1;Parent=SEQF1736.1|GG668756.1_1;Note=ATCCCTCTGTACATATCAGAATATGGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1736.1|GG668756.1	CCTyper	direct_repeat	344479	344514	36	+	.	ID=SEQF1736.1|GG668756.1_1_REPEAT2;Parent=SEQF1736.1|GG668756.1_1;Note=GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1736.1|GG668756.1	CCTyper	binding_site	344515	344544	30	+	.	ID=SEQF1736.1|GG668756.1_1_SPACER2;Parent=SEQF1736.1|GG668756.1_1;Note=TGCAGACTTTGGTGGTGCTGGTCGAAGCAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1736.1|GG668756.1	CCTyper	direct_repeat	344545	344580	36	+	.	ID=SEQF1736.1|GG668756.1_1_REPEAT3;Parent=SEQF1736.1|GG668756.1_1;Note=GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1736.1|GG668756.1	CCTyper	binding_site	344581	344610	30	+	.	ID=SEQF1736.1|GG668756.1_1_SPACER3;Parent=SEQF1736.1|GG668756.1_1;Note=CGAAGCACGATTGATATTAGCGCAACTATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1736.1|GG668756.1	CCTyper	direct_repeat	344611	344646	36	+	.	ID=SEQF1736.1|GG668756.1_1_REPEAT4;Parent=SEQF1736.1|GG668756.1_1;Note=GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1736.1|GG668756.1	CCTyper	binding_site	344647	344676	30	+	.	ID=SEQF1736.1|GG668756.1_1_SPACER4;Parent=SEQF1736.1|GG668756.1_1;Note=TGGCTTGTTGTTACGTGTATTACAGACGGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1736.1|GG668756.1	CCTyper	direct_repeat	344677	344712	36	+	.	ID=SEQF1736.1|GG668756.1_1_REPEAT5;Parent=SEQF1736.1|GG668756.1_1;Note=GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1736.1|GG668756.1	CCTyper	binding_site	344713	344742	30	+	.	ID=SEQF1736.1|GG668756.1_1_SPACER5;Parent=SEQF1736.1|GG668756.1_1;Note=GCACACACACGCTACTCACAGGCATTATAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1736.1|GG668756.1	CCTyper	direct_repeat	344743	344778	36	+	.	ID=SEQF1736.1|GG668756.1_1_REPEAT6;Parent=SEQF1736.1|GG668756.1_1;Note=GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1736.1|GG668756.1	CCTyper	binding_site	344779	344808	30	+	.	ID=SEQF1736.1|GG668756.1_1_SPACER6;Parent=SEQF1736.1|GG668756.1_1;Note=GTGCAACAAAAGAATATTGTTGTCAATGGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1736.1|GG668756.1	CCTyper	direct_repeat	344809	344844	36	+	.	ID=SEQF1736.1|GG668756.1_1_REPEAT7;Parent=SEQF1736.1|GG668756.1_1;Note=GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1736.1|GG668756.1	CCTyper	binding_site	344845	344874	30	+	.	ID=SEQF1736.1|GG668756.1_1_SPACER7;Parent=SEQF1736.1|GG668756.1_1;Note=ATCAGTTGTCGGGAAATTGCCGGAGCGTGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1736.1|GG668756.1	CCTyper	direct_repeat	344875	344910	36	+	.	ID=SEQF1736.1|GG668756.1_1_REPEAT8;Parent=SEQF1736.1|GG668756.1_1;Note=GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1736.1|GG668756.1	CCTyper	binding_site	344911	344940	30	+	.	ID=SEQF1736.1|GG668756.1_1_SPACER8;Parent=SEQF1736.1|GG668756.1_1;Note=TCATAGCAGACCAACCTGCTCCATCGCTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1736.1|GG668756.1	CCTyper	direct_repeat	344941	344976	36	+	.	ID=SEQF1736.1|GG668756.1_1_REPEAT9;Parent=SEQF1736.1|GG668756.1_1;Note=GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1736.1|GG668756.1	CCTyper	binding_site	344977	345006	30	+	.	ID=SEQF1736.1|GG668756.1_1_SPACER9;Parent=SEQF1736.1|GG668756.1_1;Note=CAATGTAAATGCTCATTATGATTTACATAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1736.1|GG668756.1	CCTyper	direct_repeat	345007	345042	36	+	.	ID=SEQF1736.1|GG668756.1_1_REPEAT10;Parent=SEQF1736.1|GG668756.1_1;Note=GTTTTAGAGTCATGTTGTTTAGTTTTCGCAGATACG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1736.1|GG668755.1	CCTyper	repeat_region	606813	607048	236	+	.	ID=SEQF1736.1|GG668755.1_2;Genome_ID=SEQF1736.1;Note=Predictor:CCtyper;Start:606813;End:607048;Consensus_Repeat:GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACTG;Number_of_Repeats:4;Repeat_Length:38;Average_Spacer_Length:28;Repeat_Identity:94.9;Spacer_Identity:34.6;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.984;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1736.1|GG668755.1	CCTyper	direct_repeat	606813	606850	38	+	.	ID=SEQF1736.1|GG668755.1_2_REPEAT1;Parent=SEQF1736.1|GG668755.1_2;Note=GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1736.1|GG668755.1	CCTyper	binding_site	606851	606878	28	+	.	ID=SEQF1736.1|GG668755.1_2_SPACER1;Parent=SEQF1736.1|GG668755.1_2;Note=CACCGTCAACGTATGTTGGGAGCTCGTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1736.1|GG668755.1	CCTyper	direct_repeat	606879	606916	38	+	.	ID=SEQF1736.1|GG668755.1_2_REPEAT2;Parent=SEQF1736.1|GG668755.1_2;Note=GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1736.1|GG668755.1	CCTyper	binding_site	606917	606944	28	+	.	ID=SEQF1736.1|GG668755.1_2_SPACER2;Parent=SEQF1736.1|GG668755.1_2;Note=CAAAAGAAGAAAAGAAAACAAAAGTTGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1736.1|GG668755.1	CCTyper	direct_repeat	606945	606982	38	+	.	ID=SEQF1736.1|GG668755.1_2_REPEAT3;Parent=SEQF1736.1|GG668755.1_2;Note=GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1736.1|GG668755.1	CCTyper	binding_site	606983	607010	28	+	.	ID=SEQF1736.1|GG668755.1_2_SPACER3;Parent=SEQF1736.1|GG668755.1_2;Note=GGTTGACTAAAGAGCCGTCAAAAGTTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1736.1|GG668755.1	CCTyper	direct_repeat	607011	607048	38	+	.	ID=SEQF1736.1|GG668755.1_2_REPEAT4;Parent=SEQF1736.1|GG668755.1_2;Note=GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1736.1|GG668756.1	CCTyper	OPERON	338454	347626	9173	+	.	ID=SEQF1736.1|GG668756.1@5;Genome_ID=SEQF1736.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Cas9_1_II,Cas1_4_CAS-I-II-III-IV-V-VI,Cas2_5_CAS-I-II-III-IV-V-VI,Csn2_1_CAS-II-A,AbiEii_0_CAS-III;Positions=342,343,344,345,347;E-values=0.00e+00,1.70e-97,2.30e-47,4.10e-107,2.30e-04;CoverageSeq=0.998,0.931,0.982,0.991,0.406;CoverageHMM=0.998,0.996,0.957,1.0,0.447;Strand_Interference=1;Strand_Adaptation=1
SEQF1736.1|GG668756.1	CCTyper	CDS	346673	347626	318	+	.	ID=SEQF1736.1|GG668756.1_347_cas;Genome_ID=SEQF1736.1;Feature_type=CDS;Product=Cas Prediction : AbiEii_0_CAS-III;coding_strand=+;E-value=0.00023;Score=18.1;Coverage_Seq=0.4056603773584906;Coverage_Hmm=0.4471830985915493
SEQF1736.1|GG668756.1	CCTyper	CDS	342468	343334	289	+	.	ID=SEQF1736.1|GG668756.1_343_cas;Genome_ID=SEQF1736.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.7e-97;Score=323.2;Coverage_Seq=0.9307958477508651;Coverage_Hmm=0.9963636363636363
SEQF1736.1|GG668756.1	CCTyper	CDS	343331	343660	110	+	.	ID=SEQF1736.1|GG668756.1_344_cas;Genome_ID=SEQF1736.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=2.3e-47;Score=157.4;Coverage_Seq=0.9818181818181818;Coverage_Hmm=0.9568965517241379
SEQF1736.1|GG668756.1	CCTyper	CDS	338454	342467	1338	+	.	ID=SEQF1736.1|GG668756.1_342_cas;Genome_ID=SEQF1736.1;Feature_type=CDS;Product=Cas Prediction : Cas9_1_II;coding_strand=+;E-value=0.0;Score=1132.0;Coverage_Seq=0.9977578475336323;Coverage_Hmm=0.9982142857142857
SEQF1736.1|GG668756.1	CCTyper	CDS	343661	344320	220	+	.	ID=SEQF1736.1|GG668756.1_345_cas;Genome_ID=SEQF1736.1;Feature_type=CDS;Product=Cas Prediction : Csn2_1_CAS-II-A;coding_strand=+;E-value=4.1e-107;Score=354.1;Coverage_Seq=0.990909090909091;Coverage_Hmm=1.0