SEQF1782.1|GG693223.1	CCTyper	repeat_region	291615	292456	842	+	.	ID=SEQF1782.1|GG693223.1_1;Genome_ID=SEQF1782.1;Note=Predictor:CCtyper;Start:291615;End:292456;Consensus_Repeat:AATAAGAACATATCTCCGAATGAAGGAGACGAAAAC;Number_of_Repeats:12;Repeat_Length:36;Average_Spacer_Length:37.3;Repeat_Identity:92.1;Spacer_Identity:44.0;Spacer_Length_Sem:0.5;Trusted:True;Cas_Type_Prediction: III-A;Cas_Subtype_Prediction:III-A;Subtype_Probability:0.915;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1782.1|GG693223.1	CCTyper	direct_repeat	291615	291650	36	+	.	ID=SEQF1782.1|GG693223.1_1_REPEAT1;Parent=SEQF1782.1|GG693223.1_1;Note=AATAAGAACATATCTCCGAATGAAGGAGACGAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1782.1|GG693223.1	CCTyper	binding_site	291651	291686	36	+	.	ID=SEQF1782.1|GG693223.1_1_SPACER1;Parent=SEQF1782.1|GG693223.1_1;Note=CTGCTTAAACGTTTACTTAGCTGGATCGTCTGGTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1782.1|GG693223.1	CCTyper	direct_repeat	291687	291722	36	+	.	ID=SEQF1782.1|GG693223.1_1_REPEAT2;Parent=SEQF1782.1|GG693223.1_1;Note=AATAAGAACATATCTCCGAATGAAGGAGACGAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1782.1|GG693223.1	CCTyper	binding_site	291723	291757	35	+	.	ID=SEQF1782.1|GG693223.1_1_SPACER2;Parent=SEQF1782.1|GG693223.1_1;Note=TCAGTTACCTTGACAATGTCGCAACCATCTGATGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1782.1|GG693223.1	CCTyper	direct_repeat	291758	291793	36	+	.	ID=SEQF1782.1|GG693223.1_1_REPEAT3;Parent=SEQF1782.1|GG693223.1_1;Note=AATAAGAACATATCTCCGAATGAAGGAGACGAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1782.1|GG693223.1	CCTyper	binding_site	291794	291831	38	+	.	ID=SEQF1782.1|GG693223.1_1_SPACER3;Parent=SEQF1782.1|GG693223.1_1;Note=AAAGTTGATTGTAGACCTTGTGCGATAATTTCATCGCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1782.1|GG693223.1	CCTyper	direct_repeat	291832	291867	36	+	.	ID=SEQF1782.1|GG693223.1_1_REPEAT4;Parent=SEQF1782.1|GG693223.1_1;Note=AATAAGAACATATCTCCGAATGAAGGAGACGAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1782.1|GG693223.1	CCTyper	binding_site	291868	291905	38	+	.	ID=SEQF1782.1|GG693223.1_1_SPACER4;Parent=SEQF1782.1|GG693223.1_1;Note=CATAATCACCGCCTAATTCATATCTTTCTTTTTCTTAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1782.1|GG693223.1	CCTyper	direct_repeat	291906	291941	36	+	.	ID=SEQF1782.1|GG693223.1_1_REPEAT5;Parent=SEQF1782.1|GG693223.1_1;Note=AATAAGAACATATCTCCGAATGAAGGAGACGAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1782.1|GG693223.1	CCTyper	binding_site	291942	291979	38	+	.	ID=SEQF1782.1|GG693223.1_1_SPACER5;Parent=SEQF1782.1|GG693223.1_1;Note=TCTTTCATCTAGTGATAATTCCATGTAGTCTATCATAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1782.1|GG693223.1	CCTyper	direct_repeat	291980	292015	36	+	.	ID=SEQF1782.1|GG693223.1_1_REPEAT6;Parent=SEQF1782.1|GG693223.1_1;Note=AATAAGAACATATCTCCGAATGAAGGAGACGAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1782.1|GG693223.1	CCTyper	binding_site	292016	292053	38	+	.	ID=SEQF1782.1|GG693223.1_1_SPACER6;Parent=SEQF1782.1|GG693223.1_1;Note=TCAAGCGCTTCGGACGATGTTATTTTTTTGAGTTGTCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1782.1|GG693223.1	CCTyper	direct_repeat	292054	292089	36	+	.	ID=SEQF1782.1|GG693223.1_1_REPEAT7;Parent=SEQF1782.1|GG693223.1_1;Note=AATAAGAACATATCTCCGAATGAAGGAGACGAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1782.1|GG693223.1	CCTyper	binding_site	292090	292126	37	+	.	ID=SEQF1782.1|GG693223.1_1_SPACER7;Parent=SEQF1782.1|GG693223.1_1;Note=TTGCAATTCTTCCAACGAACCAGCAAAGTGCATAACG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1782.1|GG693223.1	CCTyper	direct_repeat	292127	292162	36	+	.	ID=SEQF1782.1|GG693223.1_1_REPEAT8;Parent=SEQF1782.1|GG693223.1_1;Note=AATAAGAACATATCTCCGAATGAAGGAGACGAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1782.1|GG693223.1	CCTyper	binding_site	292163	292200	38	+	.	ID=SEQF1782.1|GG693223.1_1_SPACER8;Parent=SEQF1782.1|GG693223.1_1;Note=AATAGTTAATGTTTTCATTGCAACACTCCTTTATTCCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1782.1|GG693223.1	CCTyper	direct_repeat	292201	292236	36	+	.	ID=SEQF1782.1|GG693223.1_1_REPEAT9;Parent=SEQF1782.1|GG693223.1_1;Note=GATAAGAACATATCTCCGAATAAAGGAGACGAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1782.1|GG693223.1	CCTyper	binding_site	292237	292277	41	+	.	ID=SEQF1782.1|GG693223.1_1_SPACER9;Parent=SEQF1782.1|GG693223.1_1;Note=TCTTCGTGTCGTGTGATTGCATTGTATTTATAACCATCAGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1782.1|GG693223.1	CCTyper	direct_repeat	292278	292313	36	+	.	ID=SEQF1782.1|GG693223.1_1_REPEAT10;Parent=SEQF1782.1|GG693223.1_1;Note=AGTAAGAACATATCTCCGAATAAAGGAGACGAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1782.1|GG693223.1	CCTyper	binding_site	292314	292349	36	+	.	ID=SEQF1782.1|GG693223.1_1_SPACER10;Parent=SEQF1782.1|GG693223.1_1;Note=TGATTAGCACCCTCCATACTGTCTATGTTGTCATAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1782.1|GG693223.1	CCTyper	direct_repeat	292350	292385	36	+	.	ID=SEQF1782.1|GG693223.1_1_REPEAT11;Parent=SEQF1782.1|GG693223.1_1;Note=AGTAAGAACATATCTCCGAATAAAGGAGACGAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1782.1|GG693223.1	CCTyper	binding_site	292386	292420	35	+	.	ID=SEQF1782.1|GG693223.1_1_SPACER11;Parent=SEQF1782.1|GG693223.1_1;Note=TTTTTTGTTATGCAAATATTTCTTCTTTTTGTGTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1782.1|GG693223.1	CCTyper	direct_repeat	292421	292456	36	+	.	ID=SEQF1782.1|GG693223.1_1_REPEAT12;Parent=SEQF1782.1|GG693223.1_1;Note=AGTAAGAACATATCTCCGAATAAAGGAGACTGAATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1782.1|GG693223.1	CCTyper	OPERON	284103	297742	13640	+	.	ID=SEQF1782.1|GG693223.1@10;Genome_ID=SEQF1782.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type III-A;Complete_Interference=100%;Complete_Adaptation=NA;Best_type=III-A;Best_score=18.0;Genes=Cas6_0_CAS-I-II-III-IV-V-VI,Cas10_1_CAS-III,Csm2gr11_7_CAS-III-A,Csm3gr7_1_CAS-III-A-III-D,Csm4gr5_1_CAS-III-A,Csm5gr7_0_CAS-III-A-III-D,Cas1_0_II,Cas2_0_CAS-I-II-III-IV-V-VI,Csm6_1_CAS-III,TPR_0_CAS-III-B,RecD_0_IVD;Positions=286,287,288,289,290,291,292,293,294,296,297;E-values=4.30e-24,2.20e-178,1.10e-21,1.30e-79,9.70e-35,1.10e-25,3.40e-85,1.30e-21,2.40e-63,3.50e-06,2.90e-76;CoverageSeq=0.763,0.829,0.752,0.932,0.964,0.804,0.917,0.873,0.826,0.883,0.855;CoverageHMM=0.871,0.998,0.973,0.981,0.971,0.715,0.993,0.944,0.944,0.432,0.937;Strand_Interference=1;Strand_Adaptation=NA
SEQF1782.1|GG693223.1	CCTyper	CDS	284858	287152	765	+	.	ID=SEQF1782.1|GG693223.1_287_cas;Genome_ID=SEQF1782.1;Feature_type=CDS;Product=Cas Prediction : Cas10_1_CAS-III;coding_strand=+;E-value=2.2e-178;Score=591.7;Coverage_Seq=0.8287581699346406;Coverage_Hmm=0.9984709480122325
SEQF1782.1|GG693223.1	CCTyper	CDS	290250	291158	303	+	.	ID=SEQF1782.1|GG693223.1_292_cas;Genome_ID=SEQF1782.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_II;coding_strand=+;E-value=3.4e-85;Score=282.5;Coverage_Seq=0.9174917491749175;Coverage_Hmm=0.9928057553956835
SEQF1782.1|GG693223.1	CCTyper	CDS	291161	291466	102	+	.	ID=SEQF1782.1|GG693223.1_293_cas;Genome_ID=SEQF1782.1;Feature_type=CDS;Product=Cas Prediction : Cas2_0_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.3e-21;Score=73.6;Coverage_Seq=0.8725490196078431;Coverage_Hmm=0.9444444444444444
SEQF1782.1|GG693223.1	CCTyper	CDS	284103	284837	245	+	.	ID=SEQF1782.1|GG693223.1_286_cas;Genome_ID=SEQF1782.1;Feature_type=CDS;Product=Cas Prediction : Cas6_0_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=4.2999999999999996e-24;Score=82.8;Coverage_Seq=0.763265306122449;Coverage_Hmm=0.8711340206185567
SEQF1782.1|GG693223.1	CCTyper	CDS	287154	287636	161	+	.	ID=SEQF1782.1|GG693223.1_288_cas;Genome_ID=SEQF1782.1;Feature_type=CDS;Product=Cas Prediction : Csm2gr11_7_CAS-III-A;coding_strand=+;E-value=1.1e-21;Score=74.7;Coverage_Seq=0.7515527950310559;Coverage_Hmm=0.9727272727272728
SEQF1782.1|GG693223.1	CCTyper	CDS	287656	288321	222	+	.	ID=SEQF1782.1|GG693223.1_289_cas;Genome_ID=SEQF1782.1;Feature_type=CDS;Product=Cas Prediction : Csm3gr7_1_CAS-III-A-III-D;coding_strand=+;E-value=1.3e-79;Score=263.8;Coverage_Seq=0.9324324324324325;Coverage_Hmm=0.9813953488372092
SEQF1782.1|GG693223.1	CCTyper	CDS	288325	289242	306	+	.	ID=SEQF1782.1|GG693223.1_290_cas;Genome_ID=SEQF1782.1;Feature_type=CDS;Product=Cas Prediction : Csm4gr5_1_CAS-III-A;coding_strand=+;E-value=9.699999999999999e-35;Score=117.1;Coverage_Seq=0.9640522875816994;Coverage_Hmm=0.9714285714285714
SEQF1782.1|GG693223.1	CCTyper	CDS	289245	290225	327	+	.	ID=SEQF1782.1|GG693223.1_291_cas;Genome_ID=SEQF1782.1;Feature_type=CDS;Product=Cas Prediction : Csm5gr7_0_CAS-III-A-III-D;coding_strand=+;E-value=1.0999999999999999e-25;Score=87.5;Coverage_Seq=0.8042813455657493;Coverage_Hmm=0.7150684931506849
SEQF1782.1|GG693223.1	CCTyper	CDS	292542	293780	413	+	.	ID=SEQF1782.1|GG693223.1_294_cas;Genome_ID=SEQF1782.1;Feature_type=CDS;Product=Cas Prediction : Csm6_1_CAS-III;coding_strand=+;E-value=2.4e-63;Score=211.0;Coverage_Seq=0.8256658595641646;Coverage_Hmm=0.9444444444444444
SEQF1782.1|GG693223.1	CCTyper	CDS	295268	297742	825	+	.	ID=SEQF1782.1|GG693223.1_297_cas;Genome_ID=SEQF1782.1;Feature_type=CDS;Product=Cas Prediction : RecD_0_IVD;coding_strand=+;E-value=2.9e-76;Score=253.9;Coverage_Seq=0.8545454545454545;Coverage_Hmm=0.9370904325032765
SEQF1782.1|GG693223.1	CCTyper	CDS	294607	295275	223	+	.	ID=SEQF1782.1|GG693223.1_296_cas;Genome_ID=SEQF1782.1;Feature_type=CDS;Product=Cas Prediction : TPR_0_CAS-III-B;coding_strand=+;E-value=3.5e-06;Score=22.8;Coverage_Seq=0.8834080717488789;Coverage_Hmm=0.4323770491803279