SEQF1846.1|AEKN01000013.1	CCTyper	repeat_region	127463	127698	236	+	.	ID=SEQF1846.1|AEKN01000013.1_1;Genome_ID=SEQF1846.1;Note=Predictor:CCtyper;Start:127463;End:127698;Consensus_Repeat:CTGTTTTAGAGCTGTGTTGTTATAAAAGAGACGGTAATT;Number_of_Repeats:4;Repeat_Length:39;Average_Spacer_Length:26.7;Repeat_Identity:76.4;Spacer_Identity:42.9;Spacer_Length_Sem:0.3;Trusted:True;Cas_Type_Prediction: II-C;Cas_Subtype_Prediction:II-C;Subtype_Probability:0.949;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1846.1|AEKN01000013.1	CCTyper	direct_repeat	127463	127501	39	+	.	ID=SEQF1846.1|AEKN01000013.1_1_REPEAT1;Parent=SEQF1846.1|AEKN01000013.1_1;Note=AGGTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAACT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1846.1|AEKN01000013.1	CCTyper	binding_site	127502	127528	27	+	.	ID=SEQF1846.1|AEKN01000013.1_1_SPACER1;Parent=SEQF1846.1|AEKN01000013.1_1;Note=TGGTTGAAAATTGTAGCTATTTCTGGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1846.1|AEKN01000013.1	CCTyper	direct_repeat	127529	127567	39	+	.	ID=SEQF1846.1|AEKN01000013.1_1_REPEAT2;Parent=SEQF1846.1|AEKN01000013.1_1;Note=CTGTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1846.1|AEKN01000013.1	CCTyper	binding_site	127568	127594	27	+	.	ID=SEQF1846.1|AEKN01000013.1_1_SPACER2;Parent=SEQF1846.1|AEKN01000013.1_1;Note=AGAAAAGCCTCAATCATTGACTTGTCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1846.1|AEKN01000013.1	CCTyper	direct_repeat	127595	127633	39	+	.	ID=SEQF1846.1|AEKN01000013.1_1_REPEAT3;Parent=SEQF1846.1|AEKN01000013.1_1;Note=CTGTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAACT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1846.1|AEKN01000013.1	CCTyper	binding_site	127634	127659	26	+	.	ID=SEQF1846.1|AEKN01000013.1_1_SPACER3;Parent=SEQF1846.1|AEKN01000013.1_1;Note=TGACTTAGATAGTTTTTACCTCTTAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1846.1|AEKN01000013.1	CCTyper	direct_repeat	127660	127698	39	+	.	ID=SEQF1846.1|AEKN01000013.1_1_REPEAT4;Parent=SEQF1846.1|AEKN01000013.1_1;Note=CTGTTTTAGAGCTGTGTTGTTATAAAAGAGACGGTAATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1846.1|AEKN01000013.1	CCTyper	OPERON	117596	129520	11925	+	.	ID=SEQF1846.1|AEKN01000013.1@4;Genome_ID=SEQF1846.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-C;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-C;Best_score=8.0;Genes=Csa3_1_CAS-I-II-III-IV-V-VI,Cas9_1_CAS-II-C,Cas9_1_CAS-II-C,Cas1_4_CAS-I-II-III-IV-V-VI,Cas2_5_CAS-I-II-III-IV-V-VI,Csn2_1_CAS-II-A,CasR_1_CAS-I-II-III-IV-V-VI;Positions=116,120,121,122,123,124,126;E-values=1.20e-17,2.80e-290,2.60e-40,2.90e-100,3.30e-51,3.90e-100,8.40e-06;CoverageSeq=0.81,0.926,0.864,0.931,0.957,0.964,0.468;CoverageHMM=0.729,0.868,0.19,0.996,0.974,0.991,0.339;Strand_Interference=1;Strand_Adaptation=1
SEQF1846.1|AEKN01000013.1	CCTyper	CDS	125342	126208	289	+	.	ID=SEQF1846.1|AEKN01000013.1_122_cas;Genome_ID=SEQF1846.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=2.9000000000000003e-100;Score=331.9;Coverage_Seq=0.9307958477508651;Coverage_Hmm=0.9963636363636363
SEQF1846.1|AEKN01000013.1	CCTyper	CDS	126205	126549	115	+	.	ID=SEQF1846.1|AEKN01000013.1_123_cas;Genome_ID=SEQF1846.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=3.3e-51;Score=169.4;Coverage_Seq=0.9565217391304348;Coverage_Hmm=0.9741379310344828
SEQF1846.1|AEKN01000013.1	CCTyper	CDS	120984	123968	995	+	.	ID=SEQF1846.1|AEKN01000013.1_120_cas;Genome_ID=SEQF1846.1;Feature_type=CDS;Product=Cas Prediction : Cas9_1_CAS-II-C;coding_strand=+;E-value=2.8e-290;Score=961.0;Coverage_Seq=0.9256281407035176;Coverage_Hmm=0.8679577464788732
SEQF1846.1|AEKN01000013.1	CCTyper	CDS	124065	125342	426	+	.	ID=SEQF1846.1|AEKN01000013.1_121_cas;Genome_ID=SEQF1846.1;Feature_type=CDS;Product=Cas Prediction : Cas9_1_CAS-II-C;coding_strand=+;E-value=2.6e-40;Score=135.7;Coverage_Seq=0.863849765258216;Coverage_Hmm=0.19014084507042253
SEQF1846.1|AEKN01000013.1	CCTyper	CDS	129053	129520	156	+	.	ID=SEQF1846.1|AEKN01000013.1_126_cas;Genome_ID=SEQF1846.1;Feature_type=CDS;Product=Cas Prediction : CasR_1_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=8.4e-06;Score=22.1;Coverage_Seq=0.46794871794871795;Coverage_Hmm=0.3394495412844037
SEQF1846.1|AEKN01000013.1	CCTyper	CDS	117596	117895	100	-	.	ID=SEQF1846.1|AEKN01000013.1_116_cas;Genome_ID=SEQF1846.1;Feature_type=CDS;Product=Cas Prediction : Csa3_1_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.2e-17;Score=61.3;Coverage_Seq=0.81;Coverage_Hmm=0.7288135593220338
SEQF1846.1|AEKN01000013.1	CCTyper	CDS	126539	127210	224	+	.	ID=SEQF1846.1|AEKN01000013.1_124_cas;Genome_ID=SEQF1846.1;Feature_type=CDS;Product=Cas Prediction : Csn2_1_CAS-II-A;coding_strand=+;E-value=3.9000000000000003e-100;Score=330.9;Coverage_Seq=0.9642857142857143;Coverage_Hmm=0.9908256880733946