SEQF1859.2|AFUJ01000037.1	CCTyper	repeat_region	2089	2652	564	+	.	ID=SEQF1859.2|AFUJ01000037.1_1;Genome_ID=SEQF1859.2;Note=Predictor:CCtyper;Start:2089;End:2652;Consensus_Repeat:TTTCCGTCCCCGTATTGGGGATTATTTTTTTATC;Number_of_Repeats:8;Repeat_Length:34;Average_Spacer_Length:41.7;Repeat_Identity:85.7;Spacer_Identity:44.6;Spacer_Length_Sem:0.8;Trusted:True;Cas_Type_Prediction: III-A;Cas_Subtype_Prediction:III-A;Subtype_Probability:0.999;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000037.1	CCTyper	direct_repeat	2089	2122	34	+	.	ID=SEQF1859.2|AFUJ01000037.1_1_REPEAT1;Parent=SEQF1859.2|AFUJ01000037.1_1;Note=GTTCCGTCCCCATATTGGGGATTATTTTTTTATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000037.1	CCTyper	binding_site	2123	2168	46	+	.	ID=SEQF1859.2|AFUJ01000037.1_1_SPACER1;Parent=SEQF1859.2|AFUJ01000037.1_1;Note=GCATTGCTTGTGAGCGTATACACCGAGGGCGTGTGGGATTTATACG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000037.1	CCTyper	direct_repeat	2169	2202	34	+	.	ID=SEQF1859.2|AFUJ01000037.1_1_REPEAT2;Parent=SEQF1859.2|AFUJ01000037.1_1;Note=TTTCCGTCCCCGTATTGGGGATTATTTTTTTATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000037.1	CCTyper	binding_site	2203	2241	39	+	.	ID=SEQF1859.2|AFUJ01000037.1_1_SPACER2;Parent=SEQF1859.2|AFUJ01000037.1_1;Note=CAGATAGGTCGCTTGTTTTATCAAGCGGTACTTGAAAGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000037.1	CCTyper	direct_repeat	2242	2275	34	+	.	ID=SEQF1859.2|AFUJ01000037.1_1_REPEAT3;Parent=SEQF1859.2|AFUJ01000037.1_1;Note=TTTCCGTCCCCGTATTGGGGATTATTTTTTTATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000037.1	CCTyper	binding_site	2276	2317	42	+	.	ID=SEQF1859.2|AFUJ01000037.1_1_SPACER3;Parent=SEQF1859.2|AFUJ01000037.1_1;Note=GGTATTGGAAAACACTAACAACGGGAATTTAATTCACATTCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000037.1	CCTyper	direct_repeat	2318	2351	34	+	.	ID=SEQF1859.2|AFUJ01000037.1_1_REPEAT4;Parent=SEQF1859.2|AFUJ01000037.1_1;Note=TTTCTGTCCCTATATTGGGGATTGTTTTTATCGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000037.1	CCTyper	binding_site	2352	2392	41	+	.	ID=SEQF1859.2|AFUJ01000037.1_1_SPACER4;Parent=SEQF1859.2|AFUJ01000037.1_1;Note=AAGTTTTCCAACTAAAGTATATCACATTATTAAACCGAAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000037.1	CCTyper	direct_repeat	2393	2426	34	+	.	ID=SEQF1859.2|AFUJ01000037.1_1_REPEAT5;Parent=SEQF1859.2|AFUJ01000037.1_1;Note=TTTCCGTCCCCATATTGGGGATTATTTTTTTATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000037.1	CCTyper	binding_site	2427	2468	42	+	.	ID=SEQF1859.2|AFUJ01000037.1_1_SPACER5;Parent=SEQF1859.2|AFUJ01000037.1_1;Note=ACACCGTGGTTGAAGCATGAAAGATGGTGATAGGTTGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000037.1	CCTyper	direct_repeat	2469	2502	34	+	.	ID=SEQF1859.2|AFUJ01000037.1_1_REPEAT6;Parent=SEQF1859.2|AFUJ01000037.1_1;Note=TTTCCGTCCCCATATTGAGGATTATTTTTTTATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000037.1	CCTyper	binding_site	2503	2542	40	+	.	ID=SEQF1859.2|AFUJ01000037.1_1_SPACER6;Parent=SEQF1859.2|AFUJ01000037.1_1;Note=TATTATAAAGGCTGAAATTGAGGAAATTGAGGAGGTTATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000037.1	CCTyper	direct_repeat	2543	2576	34	+	.	ID=SEQF1859.2|AFUJ01000037.1_1_REPEAT7;Parent=SEQF1859.2|AFUJ01000037.1_1;Note=TTTCCGTCCCCATTTTGGGGATTATTTTTTTATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000037.1	CCTyper	binding_site	2577	2618	42	+	.	ID=SEQF1859.2|AFUJ01000037.1_1_SPACER7;Parent=SEQF1859.2|AFUJ01000037.1_1;Note=ATGAAACATAACATGGTGGTATGTGATTTATGTGGAGTTACG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000037.1	CCTyper	direct_repeat	2619	2652	34	+	.	ID=SEQF1859.2|AFUJ01000037.1_1_REPEAT8;Parent=SEQF1859.2|AFUJ01000037.1_1;Note=TTTCCGTCCCCGTATTGGGGATTGTTTTTTTATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000037.1	CCTyper	repeat_region	2896	4225	1330	+	.	ID=SEQF1859.2|AFUJ01000037.1_2;Genome_ID=SEQF1859.2;Note=Predictor:CCtyper;Start:2896;End:4225;Consensus_Repeat:GTTTCCGTCCCCATATTGGGGATTATTTTTTTATC;Number_of_Repeats:18;Repeat_Length:35;Average_Spacer_Length:41.2;Repeat_Identity:89.5;Spacer_Identity:43.1;Spacer_Length_Sem:0.4;Trusted:True;Cas_Type_Prediction: III-A;Cas_Subtype_Prediction:III-A;Subtype_Probability:0.999;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000037.1	CCTyper	direct_repeat	2896	2930	35	+	.	ID=SEQF1859.2|AFUJ01000037.1_2_REPEAT1;Parent=SEQF1859.2|AFUJ01000037.1_2;Note=AGTTCCATCCCCATATTGGGGATTAATTTTTTATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000037.1	CCTyper	binding_site	2931	2974	44	+	.	ID=SEQF1859.2|AFUJ01000037.1_2_SPACER1;Parent=SEQF1859.2|AFUJ01000037.1_2;Note=CAATTATTAGAAACAAACCCTAACGGCTTATTTATTACAGATTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000037.1	CCTyper	direct_repeat	2975	3009	35	+	.	ID=SEQF1859.2|AFUJ01000037.1_2_REPEAT2;Parent=SEQF1859.2|AFUJ01000037.1_2;Note=GTTTCCGTCCCCATGTTGGGGATTATTTTTTATCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000037.1	CCTyper	binding_site	3010	3050	41	+	.	ID=SEQF1859.2|AFUJ01000037.1_2_SPACER2;Parent=SEQF1859.2|AFUJ01000037.1_2;Note=AGGATATCACCTCAATTTGTTCGATGCGGTTTACGTGCCAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000037.1	CCTyper	direct_repeat	3051	3085	35	+	.	ID=SEQF1859.2|AFUJ01000037.1_2_REPEAT3;Parent=SEQF1859.2|AFUJ01000037.1_2;Note=GTTTCCGTCCCCGTACTGGAGATTATTTTTTTATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000037.1	CCTyper	binding_site	3086	3127	42	+	.	ID=SEQF1859.2|AFUJ01000037.1_2_SPACER3;Parent=SEQF1859.2|AFUJ01000037.1_2;Note=AAGCCACATTGGATATATCATTCAGCAATTAGGTTTCCCTAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000037.1	CCTyper	direct_repeat	3128	3162	35	+	.	ID=SEQF1859.2|AFUJ01000037.1_2_REPEAT4;Parent=SEQF1859.2|AFUJ01000037.1_2;Note=GTTTCCGTCCCCGTATTGGGGATTATTTTTTTATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000037.1	CCTyper	binding_site	3163	3202	40	+	.	ID=SEQF1859.2|AFUJ01000037.1_2_SPACER4;Parent=SEQF1859.2|AFUJ01000037.1_2;Note=AAGGGTTCACATTTCAAAAAGGTTGGTGGGGTGAGTTCTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000037.1	CCTyper	direct_repeat	3203	3237	35	+	.	ID=SEQF1859.2|AFUJ01000037.1_2_REPEAT5;Parent=SEQF1859.2|AFUJ01000037.1_2;Note=TTTTCCGTCCCCGTATTGGAGATTATTTTTTATCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000037.1	CCTyper	binding_site	3238	3277	40	+	.	ID=SEQF1859.2|AFUJ01000037.1_2_SPACER5;Parent=SEQF1859.2|AFUJ01000037.1_2;Note=AGGGAGAATTATTGTGAGTAAAGAATACATCTAGAATGAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000037.1	CCTyper	direct_repeat	3278	3312	35	+	.	ID=SEQF1859.2|AFUJ01000037.1_2_REPEAT6;Parent=SEQF1859.2|AFUJ01000037.1_2;Note=GTTTCCGTCCCCATATTGGGGATTATTTTTTATCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000037.1	CCTyper	binding_site	3313	3353	41	+	.	ID=SEQF1859.2|AFUJ01000037.1_2_SPACER6;Parent=SEQF1859.2|AFUJ01000037.1_2;Note=TACAATAGACTTTGATAGCTTGAACCGTGAAGAATCTAACG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000037.1	CCTyper	direct_repeat	3354	3388	35	+	.	ID=SEQF1859.2|AFUJ01000037.1_2_REPEAT7;Parent=SEQF1859.2|AFUJ01000037.1_2;Note=GTTTCCGTCCCCATATTGGGGATTATTTTTTTATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000037.1	CCTyper	binding_site	3389	3430	42	+	.	ID=SEQF1859.2|AFUJ01000037.1_2_SPACER7;Parent=SEQF1859.2|AFUJ01000037.1_2;Note=TGGTACTAAAACAACGACTAAAACAAGCAAAAAGGCATTGAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000037.1	CCTyper	direct_repeat	3431	3465	35	+	.	ID=SEQF1859.2|AFUJ01000037.1_2_REPEAT8;Parent=SEQF1859.2|AFUJ01000037.1_2;Note=GTTTCCGTCCCCATATTGGGGATTATTTTTTTATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000037.1	CCTyper	binding_site	3466	3506	41	+	.	ID=SEQF1859.2|AFUJ01000037.1_2_SPACER8;Parent=SEQF1859.2|AFUJ01000037.1_2;Note=TTTGCCACGTAGATAGTGTTCGTGACGCCTATGACGACAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000037.1	CCTyper	direct_repeat	3507	3541	35	+	.	ID=SEQF1859.2|AFUJ01000037.1_2_REPEAT9;Parent=SEQF1859.2|AFUJ01000037.1_2;Note=GTTTCCGTCCCCATATTGGGGATTATTTTTTTATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000037.1	CCTyper	binding_site	3542	3584	43	+	.	ID=SEQF1859.2|AFUJ01000037.1_2_SPACER9;Parent=SEQF1859.2|AFUJ01000037.1_2;Note=AATGAAAAGAATTTACTTACATTGGCAATCGGTGCAAAACTGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000037.1	CCTyper	direct_repeat	3585	3619	35	+	.	ID=SEQF1859.2|AFUJ01000037.1_2_REPEAT10;Parent=SEQF1859.2|AFUJ01000037.1_2;Note=GTTTCCGTCCCCATATTGGGGATTATTTTTTTATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000037.1	CCTyper	binding_site	3620	3659	40	+	.	ID=SEQF1859.2|AFUJ01000037.1_2_SPACER10;Parent=SEQF1859.2|AFUJ01000037.1_2;Note=AAGGATTTGAAAAAGTCGATTGTAAAGACTATGAGTCTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000037.1	CCTyper	direct_repeat	3660	3694	35	+	.	ID=SEQF1859.2|AFUJ01000037.1_2_REPEAT11;Parent=SEQF1859.2|AFUJ01000037.1_2;Note=GTTTCCGTCCCCATATTGGGGATTATTTTTTTATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000037.1	CCTyper	binding_site	3695	3733	39	+	.	ID=SEQF1859.2|AFUJ01000037.1_2_SPACER11;Parent=SEQF1859.2|AFUJ01000037.1_2;Note=GCTTAGAAAAAAAATTATTATTATACACTTTTATTTAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000037.1	CCTyper	direct_repeat	3734	3768	35	+	.	ID=SEQF1859.2|AFUJ01000037.1_2_REPEAT12;Parent=SEQF1859.2|AFUJ01000037.1_2;Note=GTTTCCGTCCCCATATTGGGGATTATTTTTTTATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000037.1	CCTyper	binding_site	3769	3811	43	+	.	ID=SEQF1859.2|AFUJ01000037.1_2_SPACER12;Parent=SEQF1859.2|AFUJ01000037.1_2;Note=TTATAAGATTTGATTATATTAGTATATGGTTGCATACGTTCGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000037.1	CCTyper	direct_repeat	3812	3846	35	+	.	ID=SEQF1859.2|AFUJ01000037.1_2_REPEAT13;Parent=SEQF1859.2|AFUJ01000037.1_2;Note=GTTTCCGTCCCCATATTGGGGATTATTTTTTTATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000037.1	CCTyper	binding_site	3847	3887	41	+	.	ID=SEQF1859.2|AFUJ01000037.1_2_SPACER13;Parent=SEQF1859.2|AFUJ01000037.1_2;Note=TCTTTGACAATGAAAAAAGTAAACTTTGACGATTTAAACAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000037.1	CCTyper	direct_repeat	3888	3922	35	+	.	ID=SEQF1859.2|AFUJ01000037.1_2_REPEAT14;Parent=SEQF1859.2|AFUJ01000037.1_2;Note=GTTTCCGTCCCCATATTGGGGATTATTTTTTTATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000037.1	CCTyper	binding_site	3923	3961	39	+	.	ID=SEQF1859.2|AFUJ01000037.1_2_SPACER14;Parent=SEQF1859.2|AFUJ01000037.1_2;Note=GTGAAGTATGCTAAGCCTATTTATAATATATTTACGTAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000037.1	CCTyper	direct_repeat	3962	3996	35	+	.	ID=SEQF1859.2|AFUJ01000037.1_2_REPEAT15;Parent=SEQF1859.2|AFUJ01000037.1_2;Note=GTTTCCGTCCCCATATTGGGGATTATTTTTTTATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000037.1	CCTyper	binding_site	3997	4041	45	+	.	ID=SEQF1859.2|AFUJ01000037.1_2_SPACER15;Parent=SEQF1859.2|AFUJ01000037.1_2;Note=TTTTTGGCAGTATCGAGACGCAAAGCTTGATTATTTTTGGTGTGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000037.1	CCTyper	direct_repeat	4042	4076	35	+	.	ID=SEQF1859.2|AFUJ01000037.1_2_REPEAT16;Parent=SEQF1859.2|AFUJ01000037.1_2;Note=GTTTCCGTCCCCATATTGGGGATTATTTTTTTATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000037.1	CCTyper	binding_site	4077	4114	38	+	.	ID=SEQF1859.2|AFUJ01000037.1_2_SPACER16;Parent=SEQF1859.2|AFUJ01000037.1_2;Note=GAACGGCTTTTTTAGCATCAGAGGCTTTTTCGGCTTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000037.1	CCTyper	direct_repeat	4115	4149	35	+	.	ID=SEQF1859.2|AFUJ01000037.1_2_REPEAT17;Parent=SEQF1859.2|AFUJ01000037.1_2;Note=GTTTCCGTCCCCATATTGGGGATTATTTTTTATCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000037.1	CCTyper	binding_site	4150	4190	41	+	.	ID=SEQF1859.2|AFUJ01000037.1_2_SPACER17;Parent=SEQF1859.2|AFUJ01000037.1_2;Note=CTTTGATGAAATTACACCATACGGTCGAGAGTGTTTAGAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000037.1	CCTyper	direct_repeat	4191	4225	35	+	.	ID=SEQF1859.2|AFUJ01000037.1_2_REPEAT18;Parent=SEQF1859.2|AFUJ01000037.1_2;Note=GTTTCCGTCCCCATATTGGGGATTATTTTTTTATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000012.1	CCTyper	repeat_region	14884	15711	828	+	.	ID=SEQF1859.2|AFUJ01000012.1_3;Genome_ID=SEQF1859.2;Note=Predictor:CCtyper;Start:14884;End:15711;Consensus_Repeat:GTTTGAGAGTAGTGTGATTCTGTAAATGTCTCAAAC;Number_of_Repeats:13;Repeat_Length:36;Average_Spacer_Length:30.0;Repeat_Identity:94.9;Spacer_Identity:43.3;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.993;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000012.1	CCTyper	direct_repeat	14884	14919	36	+	.	ID=SEQF1859.2|AFUJ01000012.1_3_REPEAT1;Parent=SEQF1859.2|AFUJ01000012.1_3;Note=GTTTGAGAGTAGTGTGATTCTGTAAATGTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000012.1	CCTyper	binding_site	14920	14949	30	+	.	ID=SEQF1859.2|AFUJ01000012.1_3_SPACER1;Parent=SEQF1859.2|AFUJ01000012.1_3;Note=TAAAACAACCAGTTAGAATTACGGAACACT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000012.1	CCTyper	direct_repeat	14950	14985	36	+	.	ID=SEQF1859.2|AFUJ01000012.1_3_REPEAT2;Parent=SEQF1859.2|AFUJ01000012.1_3;Note=GTTTGAGAGTAGTGTGATTCTGTAAATGTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000012.1	CCTyper	binding_site	14986	15015	30	+	.	ID=SEQF1859.2|AFUJ01000012.1_3_SPACER2;Parent=SEQF1859.2|AFUJ01000012.1_3;Note=AGGATGCCGTAGGTGAAACGGAAGACGTAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000012.1	CCTyper	direct_repeat	15016	15051	36	+	.	ID=SEQF1859.2|AFUJ01000012.1_3_REPEAT3;Parent=SEQF1859.2|AFUJ01000012.1_3;Note=GTTTGAGAGTAGTGTGATTCTGTAAATGTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000012.1	CCTyper	binding_site	15052	15081	30	+	.	ID=SEQF1859.2|AFUJ01000012.1_3_SPACER3;Parent=SEQF1859.2|AFUJ01000012.1_3;Note=ATTCCAATTAGAATGCACACCCACGTTATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000012.1	CCTyper	direct_repeat	15082	15117	36	+	.	ID=SEQF1859.2|AFUJ01000012.1_3_REPEAT4;Parent=SEQF1859.2|AFUJ01000012.1_3;Note=GTTTGAGAGTAGTGTGATTCTGTAAATGTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000012.1	CCTyper	binding_site	15118	15147	30	+	.	ID=SEQF1859.2|AFUJ01000012.1_3_SPACER4;Parent=SEQF1859.2|AFUJ01000012.1_3;Note=TTGCGTGCAAAATGTATTGTTAGATGCATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000012.1	CCTyper	direct_repeat	15148	15183	36	+	.	ID=SEQF1859.2|AFUJ01000012.1_3_REPEAT5;Parent=SEQF1859.2|AFUJ01000012.1_3;Note=GTTTGAGAGTAGTGTGATTCTGTAAATGTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000012.1	CCTyper	binding_site	15184	15213	30	+	.	ID=SEQF1859.2|AFUJ01000012.1_3_SPACER5;Parent=SEQF1859.2|AFUJ01000012.1_3;Note=TACATCGGCTAAGACTAAATCAGGTATCCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000012.1	CCTyper	direct_repeat	15214	15249	36	+	.	ID=SEQF1859.2|AFUJ01000012.1_3_REPEAT6;Parent=SEQF1859.2|AFUJ01000012.1_3;Note=GTTTGAGAGTAGTGTGATTCTGTAAATGTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000012.1	CCTyper	binding_site	15250	15279	30	+	.	ID=SEQF1859.2|AFUJ01000012.1_3_SPACER6;Parent=SEQF1859.2|AFUJ01000012.1_3;Note=TGCTGCTGGGTTTGAGAACCCGTACTACAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000012.1	CCTyper	direct_repeat	15280	15315	36	+	.	ID=SEQF1859.2|AFUJ01000012.1_3_REPEAT7;Parent=SEQF1859.2|AFUJ01000012.1_3;Note=GTTTGAGAGTAGTGTGATTCTGTAAATGTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000012.1	CCTyper	binding_site	15316	15345	30	+	.	ID=SEQF1859.2|AFUJ01000012.1_3_SPACER7;Parent=SEQF1859.2|AFUJ01000012.1_3;Note=AGGAGGTGAAACCGTTGAAACGGTATAGGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000012.1	CCTyper	direct_repeat	15346	15381	36	+	.	ID=SEQF1859.2|AFUJ01000012.1_3_REPEAT8;Parent=SEQF1859.2|AFUJ01000012.1_3;Note=GTTTGATAGTAGTGTGATTCTGTAAATGTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000012.1	CCTyper	binding_site	15382	15411	30	+	.	ID=SEQF1859.2|AFUJ01000012.1_3_SPACER8;Parent=SEQF1859.2|AFUJ01000012.1_3;Note=AATTGTATAAGAGAAGAAACAATGCATGCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000012.1	CCTyper	direct_repeat	15412	15447	36	+	.	ID=SEQF1859.2|AFUJ01000012.1_3_REPEAT9;Parent=SEQF1859.2|AFUJ01000012.1_3;Note=GTTTGAGAGTAGTGTGATTCTGTAAATGTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000012.1	CCTyper	binding_site	15448	15477	30	+	.	ID=SEQF1859.2|AFUJ01000012.1_3_SPACER9;Parent=SEQF1859.2|AFUJ01000012.1_3;Note=TAACGCCTTTTTTCCCATGGCATACAAGTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000012.1	CCTyper	direct_repeat	15478	15513	36	+	.	ID=SEQF1859.2|AFUJ01000012.1_3_REPEAT10;Parent=SEQF1859.2|AFUJ01000012.1_3;Note=GTTTGAGAGTAGTGTGATTCTGTAAATGTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000012.1	CCTyper	binding_site	15514	15543	30	+	.	ID=SEQF1859.2|AFUJ01000012.1_3_SPACER10;Parent=SEQF1859.2|AFUJ01000012.1_3;Note=TTAGATGAACAGATAAAGGCTCTAAAAACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000012.1	CCTyper	direct_repeat	15544	15579	36	+	.	ID=SEQF1859.2|AFUJ01000012.1_3_REPEAT11;Parent=SEQF1859.2|AFUJ01000012.1_3;Note=GTTTGAGAGTAGTGTGATTCTGTAAATGTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000012.1	CCTyper	binding_site	15580	15609	30	+	.	ID=SEQF1859.2|AFUJ01000012.1_3_SPACER11;Parent=SEQF1859.2|AFUJ01000012.1_3;Note=ATCACTTAATGATTATACATACGCTTATAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000012.1	CCTyper	direct_repeat	15610	15645	36	+	.	ID=SEQF1859.2|AFUJ01000012.1_3_REPEAT12;Parent=SEQF1859.2|AFUJ01000012.1_3;Note=GTTTGAGAGTAGTGTGATTCTGTAAATGTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000012.1	CCTyper	binding_site	15646	15675	30	+	.	ID=SEQF1859.2|AFUJ01000012.1_3_SPACER12;Parent=SEQF1859.2|AFUJ01000012.1_3;Note=GGAAGAAGATTTAAATAATCCAGAGTTATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000012.1	CCTyper	direct_repeat	15676	15711	36	+	.	ID=SEQF1859.2|AFUJ01000012.1_3_REPEAT13;Parent=SEQF1859.2|AFUJ01000012.1_3;Note=GTTTGAGAGTAGTGTGATTCTATAAATTTTTCAAGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1859.2|AFUJ01000011.1	CCTyper	OPERON	9871	13843	3973	-	.	ID=SEQF1859.2|AFUJ01000011.1@2;Genome_ID=SEQF1859.2;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type III-A;Complete_Interference=40%;Complete_Adaptation=NA;Best_type=III-A;Best_score=10.0;Genes=Csm6_7_CAS-III,Cas6_8_CAS-I-II-III-IV-V-VI,Csm5_0_IIIA,Csm4_0_IIIA;Positions=11,12,13,14;E-values=1.80e-45,8.50e-20,4.10e-22,5.20e-21;CoverageSeq=0.836,0.911,0.915,0.931;CoverageHMM=0.987,0.858,0.967,0.646;Strand_Interference=-1;Strand_Adaptation=NA
SEQF1859.2|AFUJ01000075.1	CCTyper	OPERON	1	3315	3315	+	.	ID=SEQF1859.2|AFUJ01000075.1@1;Genome_ID=SEQF1859.2;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type III-A;Complete_Interference=60%;Complete_Adaptation=NA;Best_type=III-A;Best_score=8.0;Genes=Cas10_1_CAS-III,Cas10_1_CAS-III,Csm2gr11_7_CAS-III-A,Csm3gr7_1_CAS-III-A-III-D;Positions=1,2,3,4;E-values=8.60e-101,3.00e-53,3.00e-19,1.20e-69;CoverageSeq=0.957,0.697,0.893,0.872;CoverageHMM=0.557,0.307,0.973,0.958;Strand_Interference=1;Strand_Adaptation=NA
SEQF1859.2|AFUJ01000012.1	CCTyper	OPERON	8821	14817	5997	+	.	ID=SEQF1859.2|AFUJ01000012.1@1;Genome_ID=SEQF1859.2;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Cas9_0_II,Cas9_0_II,Cas1_4_CAS-I-II-III-IV-V-VI,Cas2_9_CAS-I-II-III-IV-V-VI,Csn2_0_CAS-II-A;Positions=11,12,13,14,15;E-values=4.30e-42,7.10e-132,4.60e-89,9.50e-36,1.10e-69;CoverageSeq=0.684,0.721,0.922,0.99,0.996;CoverageHMM=0.181,0.805,0.996,1.0,1.0;Strand_Interference=1;Strand_Adaptation=1
SEQF1859.2|AFUJ01000075.1	CCTyper	CDS	1	1185	395	+	.	ID=SEQF1859.2|AFUJ01000075.1_1_cas;Genome_ID=SEQF1859.2;Feature_type=CDS;Product=Cas Prediction : Cas10_1_CAS-III;coding_strand=+;E-value=8.600000000000001e-101;Score=335.0;Coverage_Seq=0.9569620253164557;Coverage_Hmm=0.5565749235474006
SEQF1859.2|AFUJ01000075.1	CCTyper	CDS	1245	2174	310	+	.	ID=SEQF1859.2|AFUJ01000075.1_2_cas;Genome_ID=SEQF1859.2;Feature_type=CDS;Product=Cas Prediction : Cas10_1_CAS-III;coding_strand=+;E-value=3e-53;Score=177.9;Coverage_Seq=0.6967741935483871;Coverage_Hmm=0.3073394495412844
SEQF1859.2|AFUJ01000012.1	CCTyper	CDS	12958	13836	293	+	.	ID=SEQF1859.2|AFUJ01000012.1_13_cas;Genome_ID=SEQF1859.2;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=4.6e-89;Score=294.8;Coverage_Seq=0.9215017064846417;Coverage_Hmm=0.9963636363636363
SEQF1859.2|AFUJ01000012.1	CCTyper	CDS	13841	14146	102	+	.	ID=SEQF1859.2|AFUJ01000012.1_14_cas;Genome_ID=SEQF1859.2;Feature_type=CDS;Product=Cas Prediction : Cas2_9_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=9.5e-36;Score=118.7;Coverage_Seq=0.9901960784313726;Coverage_Hmm=1.0
SEQF1859.2|AFUJ01000011.1	CCTyper	CDS	11223	11999	259	-	.	ID=SEQF1859.2|AFUJ01000011.1_12_cas;Genome_ID=SEQF1859.2;Feature_type=CDS;Product=Cas Prediction : Cas6_8_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=8.5e-20;Score=67.8;Coverage_Seq=0.9111969111969112;Coverage_Hmm=0.8581818181818182
SEQF1859.2|AFUJ01000012.1	CCTyper	CDS	8821	9552	244	+	.	ID=SEQF1859.2|AFUJ01000012.1_11_cas;Genome_ID=SEQF1859.2;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=+;E-value=4.3e-42;Score=141.0;Coverage_Seq=0.6844262295081968;Coverage_Hmm=0.18072289156626506
SEQF1859.2|AFUJ01000012.1	CCTyper	CDS	9587	12949	1121	+	.	ID=SEQF1859.2|AFUJ01000012.1_12_cas;Genome_ID=SEQF1859.2;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=+;E-value=7.1e-132;Score=438.0;Coverage_Seq=0.72078501338091;Coverage_Hmm=0.8048192771084337
SEQF1859.2|AFUJ01000075.1	CCTyper	CDS	2186	2632	149	+	.	ID=SEQF1859.2|AFUJ01000075.1_3_cas;Genome_ID=SEQF1859.2;Feature_type=CDS;Product=Cas Prediction : Csm2gr11_7_CAS-III-A;coding_strand=+;E-value=3e-19;Score=66.7;Coverage_Seq=0.8926174496644296;Coverage_Hmm=0.9727272727272728
SEQF1859.2|AFUJ01000075.1	CCTyper	CDS	2635	3315	227	+	.	ID=SEQF1859.2|AFUJ01000075.1_4_cas;Genome_ID=SEQF1859.2;Feature_type=CDS;Product=Cas Prediction : Csm3gr7_1_CAS-III-A-III-D;coding_strand=+;E-value=1.1999999999999998e-69;Score=231.0;Coverage_Seq=0.8722466960352423;Coverage_Hmm=0.958139534883721
SEQF1859.2|AFUJ01000011.1	CCTyper	CDS	13148	13843	232	-	.	ID=SEQF1859.2|AFUJ01000011.1_14_cas;Genome_ID=SEQF1859.2;Feature_type=CDS;Product=Cas Prediction : Csm4_0_IIIA;coding_strand=-;E-value=5.2e-21;Score=71.7;Coverage_Seq=0.9310344827586207;Coverage_Hmm=0.6456953642384106
SEQF1859.2|AFUJ01000011.1	CCTyper	CDS	11986	13155	390	-	.	ID=SEQF1859.2|AFUJ01000011.1_13_cas;Genome_ID=SEQF1859.2;Feature_type=CDS;Product=Cas Prediction : Csm5_0_IIIA;coding_strand=-;E-value=4.1000000000000004e-22;Score=75.6;Coverage_Seq=0.9153846153846154;Coverage_Hmm=0.967032967032967
SEQF1859.2|AFUJ01000011.1	CCTyper	CDS	9871	11220	450	-	.	ID=SEQF1859.2|AFUJ01000011.1_11_cas;Genome_ID=SEQF1859.2;Feature_type=CDS;Product=Cas Prediction : Csm6_7_CAS-III;coding_strand=-;E-value=1.8e-45;Score=151.9;Coverage_Seq=0.8355555555555556;Coverage_Hmm=0.9865951742627346
SEQF1859.2|AFUJ01000012.1	CCTyper	CDS	14143	14817	225	+	.	ID=SEQF1859.2|AFUJ01000012.1_15_cas;Genome_ID=SEQF1859.2;Feature_type=CDS;Product=Cas Prediction : Csn2_0_CAS-II-A;coding_strand=+;E-value=1.0999999999999999e-69;Score=230.8;Coverage_Seq=0.9955555555555555;Coverage_Hmm=1.0