SEQF1881.1|JH591130.1	CCTyper	repeat_region	45583	46128	546	+	.	ID=SEQF1881.1|JH591130.1_1;Genome_ID=SEQF1881.1;Note=Predictor:CCtyper;Start:45583;End:46128;Consensus_Repeat:GTTTACAAAAACTAACCCTGTTTAGGGGACGGAAACTT;Number_of_Repeats:8;Repeat_Length:38.0;Average_Spacer_Length:34.6;Repeat_Identity:75.3;Spacer_Identity:43.1;Spacer_Length_Sem:0.6;Trusted:True;Cas_Type_Prediction: III-A;Cas_Subtype_Prediction:III-A;Subtype_Probability:0.868;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591130.1	CCTyper	direct_repeat	45583	45620	38	+	.	ID=SEQF1881.1|JH591130.1_1_REPEAT1;Parent=SEQF1881.1|JH591130.1_1;Note=GTTTACAAAAGCTAACCCTGATAAGGGGACGGAAACAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591130.1	CCTyper	binding_site	45621	45654	34	+	.	ID=SEQF1881.1|JH591130.1_1_SPACER1;Parent=SEQF1881.1|JH591130.1_1;Note=ATTAGAAGCAATTTTTATTGCAGTTGCTGTTTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591130.1	CCTyper	direct_repeat	45655	45692	38	+	.	ID=SEQF1881.1|JH591130.1_1_REPEAT2;Parent=SEQF1881.1|JH591130.1_1;Note=GTTTACAAAAGCTAACCCCGATAAGGGGACGGAAACTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591130.1	CCTyper	binding_site	45693	45727	35	+	.	ID=SEQF1881.1|JH591130.1_1_SPACER2;Parent=SEQF1881.1|JH591130.1_1;Note=AGGATACTCATCATCTTCATTCATTGAGAAGTCAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591130.1	CCTyper	direct_repeat	45728	45765	38	+	.	ID=SEQF1881.1|JH591130.1_1_REPEAT3;Parent=SEQF1881.1|JH591130.1_1;Note=GTTTACAAAGGCTTACCCCGATAAGGGGACGGAAACCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591130.1	CCTyper	binding_site	45766	45802	37	+	.	ID=SEQF1881.1|JH591130.1_1_SPACER3;Parent=SEQF1881.1|JH591130.1_1;Note=GTCTTCTATGGTCTTTCTGATGTCGTCTTCCATCATG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591130.1	CCTyper	direct_repeat	45803	45840	38	+	.	ID=SEQF1881.1|JH591130.1_1_REPEAT4;Parent=SEQF1881.1|JH591130.1_1;Note=GTTTACAAAAACTAACCCTGTTTAGGGGACGGAAACTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591130.1	CCTyper	binding_site	45841	45875	35	+	.	ID=SEQF1881.1|JH591130.1_1_SPACER4;Parent=SEQF1881.1|JH591130.1_1;Note=CTTAGTTTCATCATATCCAGCCAGTACCTGACCTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591130.1	CCTyper	direct_repeat	45876	45913	38	+	.	ID=SEQF1881.1|JH591130.1_1_REPEAT5;Parent=SEQF1881.1|JH591130.1_1;Note=GTTTACAAAAGCTATCCCCGATAAGGGGACGGAAACTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591130.1	CCTyper	binding_site	45914	45945	32	+	.	ID=SEQF1881.1|JH591130.1_1_SPACER5;Parent=SEQF1881.1|JH591130.1_1;Note=CATAGCACAGTAATTTAGCATAGCATCTTCAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591130.1	CCTyper	direct_repeat	45946	45983	38	+	.	ID=SEQF1881.1|JH591130.1_1_REPEAT6;Parent=SEQF1881.1|JH591130.1_1;Note=GTTTACAAAAGCTAACCCCGTTTAGGGGACGAAAATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591130.1	CCTyper	binding_site	45984	46018	35	+	.	ID=SEQF1881.1|JH591130.1_1_SPACER6;Parent=SEQF1881.1|JH591130.1_1;Note=ATAAAAACTCCTCTCCACCGTTAAGGGTCGTGGTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591130.1	CCTyper	direct_repeat	46019	46056	38	+	.	ID=SEQF1881.1|JH591130.1_1_REPEAT7;Parent=SEQF1881.1|JH591130.1_1;Note=GTTTACAAAACCTTACCCCGTTAAGGGGACGGAAACTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591130.1	CCTyper	binding_site	46057	46090	34	+	.	ID=SEQF1881.1|JH591130.1_1_SPACER7;Parent=SEQF1881.1|JH591130.1_1;Note=ATCAGTTGGGATTGTAAGCATATCGTGGAATATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591130.1	CCTyper	direct_repeat	46091	46128	38	+	.	ID=SEQF1881.1|JH591130.1_1_REPEAT8;Parent=SEQF1881.1|JH591130.1_1;Note=GTTTACAAAAGCCACCCCCGTTTAGGGGACACCCCCCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591168.1	CCTyper	repeat_region	135784	136361	578	+	.	ID=SEQF1881.1|JH591168.1_2;Genome_ID=SEQF1881.1;Note=Predictor:CCtyper;Start:135784;End:136361;Consensus_Repeat:GTGTTCCCCGCGTAGGCGGGGGTGATCC;Number_of_Repeats:10;Repeat_Length:28.0;Average_Spacer_Length:33.1;Repeat_Identity:97.5;Spacer_Identity:43.8;Spacer_Length_Sem:0.1;Trusted:True;Cas_Type_Prediction: I-E;Cas_Subtype_Prediction:I-E;Subtype_Probability:0.987;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591168.1	CCTyper	direct_repeat	135784	135811	28	+	.	ID=SEQF1881.1|JH591168.1_2_REPEAT1;Parent=SEQF1881.1|JH591168.1_2;Note=GTGTTCCCCGCGTAGGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591168.1	CCTyper	binding_site	135812	135845	34	+	.	ID=SEQF1881.1|JH591168.1_2_SPACER1;Parent=SEQF1881.1|JH591168.1_2;Note=CGATACTAGAATTACAGCGTTGGAGGCAAGACCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591168.1	CCTyper	direct_repeat	135846	135873	28	+	.	ID=SEQF1881.1|JH591168.1_2_REPEAT2;Parent=SEQF1881.1|JH591168.1_2;Note=GTGTTCCCCGCGTAGGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591168.1	CCTyper	binding_site	135874	135906	33	+	.	ID=SEQF1881.1|JH591168.1_2_SPACER2;Parent=SEQF1881.1|JH591168.1_2;Note=TCAATGATACAAAGGGGGTTAAAATCTTATGAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591168.1	CCTyper	direct_repeat	135907	135934	28	+	.	ID=SEQF1881.1|JH591168.1_2_REPEAT3;Parent=SEQF1881.1|JH591168.1_2;Note=GTGTTCCCCGCGTAGGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591168.1	CCTyper	binding_site	135935	135967	33	+	.	ID=SEQF1881.1|JH591168.1_2_SPACER3;Parent=SEQF1881.1|JH591168.1_2;Note=CGCGTCAATATGCTTAAAGATAGATGTGTTCAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591168.1	CCTyper	direct_repeat	135968	135995	28	+	.	ID=SEQF1881.1|JH591168.1_2_REPEAT4;Parent=SEQF1881.1|JH591168.1_2;Note=GTGTTCCCCGCGTAGGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591168.1	CCTyper	binding_site	135996	136028	33	+	.	ID=SEQF1881.1|JH591168.1_2_SPACER4;Parent=SEQF1881.1|JH591168.1_2;Note=TAATCTCCTTGACCAGGACTGATAGAATTATAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591168.1	CCTyper	direct_repeat	136029	136056	28	+	.	ID=SEQF1881.1|JH591168.1_2_REPEAT5;Parent=SEQF1881.1|JH591168.1_2;Note=GTGTTCCCCGCGTAGGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591168.1	CCTyper	binding_site	136057	136089	33	+	.	ID=SEQF1881.1|JH591168.1_2_SPACER5;Parent=SEQF1881.1|JH591168.1_2;Note=CCATAGTGGAAAGTTCCACATAACTATCATAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591168.1	CCTyper	direct_repeat	136090	136117	28	+	.	ID=SEQF1881.1|JH591168.1_2_REPEAT6;Parent=SEQF1881.1|JH591168.1_2;Note=GTGTTCCCCGCGTAGGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591168.1	CCTyper	binding_site	136118	136150	33	+	.	ID=SEQF1881.1|JH591168.1_2_SPACER6;Parent=SEQF1881.1|JH591168.1_2;Note=TCGCAAGCGGTTCAGTTCGATGCGTTGCACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591168.1	CCTyper	direct_repeat	136151	136178	28	+	.	ID=SEQF1881.1|JH591168.1_2_REPEAT7;Parent=SEQF1881.1|JH591168.1_2;Note=GTGTTCCCCGCGTAGGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591168.1	CCTyper	binding_site	136179	136211	33	+	.	ID=SEQF1881.1|JH591168.1_2_SPACER7;Parent=SEQF1881.1|JH591168.1_2;Note=TCTCAATGAGGCGCTTGAAAAAGCAAGGTACAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591168.1	CCTyper	direct_repeat	136212	136239	28	+	.	ID=SEQF1881.1|JH591168.1_2_REPEAT8;Parent=SEQF1881.1|JH591168.1_2;Note=GTGTTCCCCGCATAGGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591168.1	CCTyper	binding_site	136240	136272	33	+	.	ID=SEQF1881.1|JH591168.1_2_SPACER8;Parent=SEQF1881.1|JH591168.1_2;Note=AATGTTTAGCCTGATAGCGCAAAAGGGCATACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591168.1	CCTyper	direct_repeat	136273	136300	28	+	.	ID=SEQF1881.1|JH591168.1_2_REPEAT9;Parent=SEQF1881.1|JH591168.1_2;Note=GTGTTCCCCGCATAGGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591168.1	CCTyper	binding_site	136301	136333	33	+	.	ID=SEQF1881.1|JH591168.1_2_SPACER9;Parent=SEQF1881.1|JH591168.1_2;Note=CTGTTCGATTTGTTTATCCCTATCTTTACATAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591168.1	CCTyper	direct_repeat	136334	136361	28	+	.	ID=SEQF1881.1|JH591168.1_2_REPEAT10;Parent=SEQF1881.1|JH591168.1_2;Note=GTGTTCCCCGCGTAGGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591168.1	CCTyper	repeat_region	136371	137130	760	+	.	ID=SEQF1881.1|JH591168.1_3;Genome_ID=SEQF1881.1;Note=Predictor:CCtyper;Start:136371;End:137130;Consensus_Repeat:GTGTTCCCCGCGTAGGCGGGGGTGATCC;Number_of_Repeats:13;Repeat_Length:28.0;Average_Spacer_Length:33.0;Repeat_Identity:92.5;Spacer_Identity:44.3;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: I-E;Cas_Subtype_Prediction:I-E;Subtype_Probability:0.987;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591168.1	CCTyper	direct_repeat	136371	136398	28	+	.	ID=SEQF1881.1|JH591168.1_3_REPEAT1;Parent=SEQF1881.1|JH591168.1_3;Note=NTGTTCCCCGCGTAGGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591168.1	CCTyper	binding_site	136399	136431	33	+	.	ID=SEQF1881.1|JH591168.1_3_SPACER1;Parent=SEQF1881.1|JH591168.1_3;Note=TCAATCACATGGAATCGGCAGTAATATCTGTAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591168.1	CCTyper	direct_repeat	136432	136459	28	+	.	ID=SEQF1881.1|JH591168.1_3_REPEAT2;Parent=SEQF1881.1|JH591168.1_3;Note=GTGTTCCCCGCGTAGGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591168.1	CCTyper	binding_site	136460	136492	33	+	.	ID=SEQF1881.1|JH591168.1_3_SPACER2;Parent=SEQF1881.1|JH591168.1_3;Note=AGGAGCAAGAGTTGATGGATTTTCTCAAATTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591168.1	CCTyper	direct_repeat	136493	136520	28	+	.	ID=SEQF1881.1|JH591168.1_3_REPEAT3;Parent=SEQF1881.1|JH591168.1_3;Note=GTGTTCCCTGCGTAGGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591168.1	CCTyper	binding_site	136521	136553	33	+	.	ID=SEQF1881.1|JH591168.1_3_SPACER3;Parent=SEQF1881.1|JH591168.1_3;Note=AGAACAGGCAAATCTGATGTCGAAAAACCTTAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591168.1	CCTyper	direct_repeat	136554	136581	28	+	.	ID=SEQF1881.1|JH591168.1_3_REPEAT4;Parent=SEQF1881.1|JH591168.1_3;Note=GTGTTCCCCGCGTAGGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591168.1	CCTyper	binding_site	136582	136614	33	+	.	ID=SEQF1881.1|JH591168.1_3_SPACER4;Parent=SEQF1881.1|JH591168.1_3;Note=CCAAAATACCGCATGGAAAGACTAATCTCTAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591168.1	CCTyper	direct_repeat	136615	136642	28	+	.	ID=SEQF1881.1|JH591168.1_3_REPEAT5;Parent=SEQF1881.1|JH591168.1_3;Note=GTGTTCCCCGCGTAGGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591168.1	CCTyper	binding_site	136643	136675	33	+	.	ID=SEQF1881.1|JH591168.1_3_SPACER5;Parent=SEQF1881.1|JH591168.1_3;Note=TTAGATATACAGCTGAGGAAAAGGCATTTTTAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591168.1	CCTyper	direct_repeat	136676	136703	28	+	.	ID=SEQF1881.1|JH591168.1_3_REPEAT6;Parent=SEQF1881.1|JH591168.1_3;Note=GTGTTCCCCGCGTAGGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591168.1	CCTyper	binding_site	136704	136736	33	+	.	ID=SEQF1881.1|JH591168.1_3_SPACER6;Parent=SEQF1881.1|JH591168.1_3;Note=TGCAAAAAGCAATGCCCAAAAGTAAGACATACG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591168.1	CCTyper	direct_repeat	136737	136764	28	+	.	ID=SEQF1881.1|JH591168.1_3_REPEAT7;Parent=SEQF1881.1|JH591168.1_3;Note=GTGTTCCCCGCGTAGGCGGAGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591168.1	CCTyper	binding_site	136765	136797	33	+	.	ID=SEQF1881.1|JH591168.1_3_SPACER7;Parent=SEQF1881.1|JH591168.1_3;Note=TGATATCGGACTGTATTCTGCAGTCTTTACGAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591168.1	CCTyper	direct_repeat	136798	136825	28	+	.	ID=SEQF1881.1|JH591168.1_3_REPEAT8;Parent=SEQF1881.1|JH591168.1_3;Note=GTGTTCCCCGCGTAGGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591168.1	CCTyper	binding_site	136826	136858	33	+	.	ID=SEQF1881.1|JH591168.1_3_SPACER8;Parent=SEQF1881.1|JH591168.1_3;Note=TAGATTTTGAGCTGCTGAAAGAATATCATGAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591168.1	CCTyper	direct_repeat	136859	136886	28	+	.	ID=SEQF1881.1|JH591168.1_3_REPEAT9;Parent=SEQF1881.1|JH591168.1_3;Note=GTGTTCCCAGCATAGGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591168.1	CCTyper	binding_site	136887	136919	33	+	.	ID=SEQF1881.1|JH591168.1_3_SPACER9;Parent=SEQF1881.1|JH591168.1_3;Note=CCAGTCGGAAATGTTGGGCAGTTGCTTAGGTAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591168.1	CCTyper	direct_repeat	136920	136947	28	+	.	ID=SEQF1881.1|JH591168.1_3_REPEAT10;Parent=SEQF1881.1|JH591168.1_3;Note=GTGTTCCTCGCGTAGGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591168.1	CCTyper	binding_site	136948	136980	33	+	.	ID=SEQF1881.1|JH591168.1_3_SPACER10;Parent=SEQF1881.1|JH591168.1_3;Note=CATTAGGGGGAACATGTAACCATAACTCAATAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591168.1	CCTyper	direct_repeat	136981	137008	28	+	.	ID=SEQF1881.1|JH591168.1_3_REPEAT11;Parent=SEQF1881.1|JH591168.1_3;Note=GTGTTCCCCGCGTAGGCGAGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591168.1	CCTyper	binding_site	137009	137041	33	+	.	ID=SEQF1881.1|JH591168.1_3_SPACER11;Parent=SEQF1881.1|JH591168.1_3;Note=TCCACGAATTTATATAATTTGTATGTCTACGAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591168.1	CCTyper	direct_repeat	137042	137069	28	+	.	ID=SEQF1881.1|JH591168.1_3_REPEAT12;Parent=SEQF1881.1|JH591168.1_3;Note=GTGTTCCCCGCGTAGGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591168.1	CCTyper	binding_site	137070	137102	33	+	.	ID=SEQF1881.1|JH591168.1_3_SPACER12;Parent=SEQF1881.1|JH591168.1_3;Note=TAAAATTGCGACTGGTCTAACAACTTAAAACCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591168.1	CCTyper	direct_repeat	137103	137130	28	+	.	ID=SEQF1881.1|JH591168.1_3_REPEAT13;Parent=SEQF1881.1|JH591168.1_3;Note=GTGTTCCCCGCGTAGTCAGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591179.1	CCTyper	repeat_region	27239	27747	509	+	.	ID=SEQF1881.1|JH591179.1_4;Genome_ID=SEQF1881.1;Note=Predictor:CCtyper;Start:27239;End:27747;Consensus_Repeat:GTAAGTACCTTACCTATAAGGAATGGAAAC;Number_of_Repeats:8;Repeat_Length:30.0;Average_Spacer_Length:38.4;Repeat_Identity:98.4;Spacer_Identity:43.0;Spacer_Length_Sem:2.0;Trusted:True;Cas_Type_Prediction: III-D;Cas_Subtype_Prediction:III-D;Subtype_Probability:0.984;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591179.1	CCTyper	direct_repeat	27239	27268	30	+	.	ID=SEQF1881.1|JH591179.1_4_REPEAT1;Parent=SEQF1881.1|JH591179.1_4;Note=GTAAGTACCTTACCTATAAGGAATGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591179.1	CCTyper	binding_site	27269	27310	42	+	.	ID=SEQF1881.1|JH591179.1_4_SPACER1;Parent=SEQF1881.1|JH591179.1_4;Note=TATCAGGTGCTGAAAGTTATTCTCGAGGGAGTAGAGTGTCTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591179.1	CCTyper	direct_repeat	27311	27340	30	+	.	ID=SEQF1881.1|JH591179.1_4_REPEAT2;Parent=SEQF1881.1|JH591179.1_4;Note=GTAAGTACCTTACCTATAAGGAATGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591179.1	CCTyper	binding_site	27341	27375	35	+	.	ID=SEQF1881.1|JH591179.1_4_SPACER2;Parent=SEQF1881.1|JH591179.1_4;Note=TATATAGAGCTTGCTGACGCCTTTGACTACAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591179.1	CCTyper	direct_repeat	27376	27405	30	+	.	ID=SEQF1881.1|JH591179.1_4_REPEAT3;Parent=SEQF1881.1|JH591179.1_4;Note=GTAAGTACCTTACCTATAAGGAATGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591179.1	CCTyper	binding_site	27406	27454	49	+	.	ID=SEQF1881.1|JH591179.1_4_SPACER3;Parent=SEQF1881.1|JH591179.1_4;Note=AATCTTCTGCCTCAAAAGACACTTGTATTTTTTTGCCAGCCAATGTACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591179.1	CCTyper	direct_repeat	27455	27484	30	+	.	ID=SEQF1881.1|JH591179.1_4_REPEAT4;Parent=SEQF1881.1|JH591179.1_4;Note=GTAAGTACCTTACCTATAAGGAATGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591179.1	CCTyper	binding_site	27485	27519	35	+	.	ID=SEQF1881.1|JH591179.1_4_SPACER4;Parent=SEQF1881.1|JH591179.1_4;Note=AAGTTTTGACTGTTTATACCTGAGATATCAACGGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591179.1	CCTyper	direct_repeat	27520	27549	30	+	.	ID=SEQF1881.1|JH591179.1_4_REPEAT5;Parent=SEQF1881.1|JH591179.1_4;Note=GTAAGTACCTTACCTATAAGGAATGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591179.1	CCTyper	binding_site	27550	27585	36	+	.	ID=SEQF1881.1|JH591179.1_4_SPACER5;Parent=SEQF1881.1|JH591179.1_4;Note=AGGCTTCCATCTGGATTATGGTAGGTCCAATAATTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591179.1	CCTyper	direct_repeat	27586	27615	30	+	.	ID=SEQF1881.1|JH591179.1_4_REPEAT6;Parent=SEQF1881.1|JH591179.1_4;Note=GTAAGTACCTTACCTATAAGGAATTGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591179.1	CCTyper	binding_site	27616	27651	36	+	.	ID=SEQF1881.1|JH591179.1_4_SPACER6;Parent=SEQF1881.1|JH591179.1_4;Note=CTGAGCTGGTTTTGAGGCCGATTCCTGGGCCGACTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591179.1	CCTyper	direct_repeat	27652	27681	30	+	.	ID=SEQF1881.1|JH591179.1_4_REPEAT7;Parent=SEQF1881.1|JH591179.1_4;Note=GTAAGTACCTTACCTATAAGGAATGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591179.1	CCTyper	binding_site	27682	27717	36	+	.	ID=SEQF1881.1|JH591179.1_4_SPACER7;Parent=SEQF1881.1|JH591179.1_4;Note=TAAAGTCTGGCTTTAAATCAATGAGCTTGTAGATAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591179.1	CCTyper	direct_repeat	27718	27747	30	+	.	ID=SEQF1881.1|JH591179.1_4_REPEAT8;Parent=SEQF1881.1|JH591179.1_4;Note=GTAAGTACCTTACCTATAAGGAATGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591179.1	CCTyper	repeat_region	30468	30708	241	+	.	ID=SEQF1881.1|JH591179.1-1_6;Genome_ID=SEQF1881.1;Note=Predictor:CCtyper;Start:30468;End:30708;Consensus_Repeat:TGTAAGTACCTTACCTATAAGGAATGGAAAC;Number_of_Repeats:4;Repeat_Length:29.2;Average_Spacer_Length:41.3;Repeat_Identity:84.8;Spacer_Identity:42.5;Spacer_Length_Sem:1.9;Trusted:True;Cas_Type_Prediction: III-D;Cas_Subtype_Prediction:III-D;Subtype_Probability:0.981;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591179.1	CCTyper	direct_repeat	30468	30498	31	+	.	ID=SEQF1881.1|JH591179.1-1_6_REPEAT1;Parent=SEQF1881.1|JH591179.1-1_6;Note=TGTAAGTACCTTACCTATAAGGAATGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591179.1	CCTyper	binding_site	30499	30537	39	+	.	ID=SEQF1881.1|JH591179.1-1_6_SPACER1;Parent=SEQF1881.1|JH591179.1-1_6;Note=CGATTGTTGGTTGCCAATTTTCTTCTTTGAATCTTATAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591179.1	CCTyper	direct_repeat	30538	30568	31	+	.	ID=SEQF1881.1|JH591179.1-1_6_REPEAT2;Parent=SEQF1881.1|JH591179.1-1_6;Note=TGTAAGTACCTTACCTATAAGGAATGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591179.1	CCTyper	binding_site	30569	30608	40	+	.	ID=SEQF1881.1|JH591179.1-1_6_SPACER2;Parent=SEQF1881.1|JH591179.1-1_6;Note=TATATTCCTCCTCAAACTTAGGGTCATTAGTTAGCTCTGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591179.1	CCTyper	direct_repeat	30609	30639	31	+	.	ID=SEQF1881.1|JH591179.1-1_6_REPEAT3;Parent=SEQF1881.1|JH591179.1-1_6;Note=TGTAAGTACCTTACCTGTAAGGAATGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591179.1	CCTyper	binding_site	30640	30684	45	+	.	ID=SEQF1881.1|JH591179.1-1_6_SPACER3;Parent=SEQF1881.1|JH591179.1-1_6;Note=AATTTCTGAAAATCATTCAAATTTCCGTCATCATAGCTATTTATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591179.1	CCTyper	direct_repeat	30685	30708	24	+	.	ID=SEQF1881.1|JH591179.1-1_6_REPEAT4;Parent=SEQF1881.1|JH591179.1-1_6;Note=GTAAGTACCTTACCTGTAAGGAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF1881.1|JH591168.1	CCTyper	OPERON	125744	135290	9547	+	.	ID=SEQF1881.1|JH591168.1@5;Genome_ID=SEQF1881.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-E;Complete_Interference=100%;Complete_Adaptation=50%;Best_type=I-E;Best_score=24.0;Genes=Cas3_0_CAS-I,Cas8e_4_CAS-I-E,Cse2gr11_5_CAS-I-E,Cas7_1_CAS-I-E,Cas5_0_IE,Cas6e_2_CAS-I-II-III-IV-V-VI,Cas6e_2_CAS-I-II-III-IV-V-VI,Cas1_0_IE,DEDDh_0_CAS-I-II-III-IV-V-VI;Positions=120,121,122,123,124,125,126,127,128;E-values=3.50e-73,1.80e-90,4.50e-66,2.10e-114,2.00e-45,1.30e-17,7.10e-22,5.00e-105,3.60e-34;CoverageSeq=0.436,0.893,0.984,0.944,0.867,0.606,0.94,0.854,0.518;CoverageHMM=0.977,0.981,0.975,0.992,0.974,0.5,0.475,0.993,0.988;Strand_Interference=1;Strand_Adaptation=1
SEQF1881.1|JH591179.1	CCTyper	OPERON	20616	43460	22845	-	.	ID=SEQF1881.1|JH591179.1@1;Genome_ID=SEQF1881.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type III-D;Complete_Interference=50%;Complete_Adaptation=NA;Best_type=III-D;Best_score=12.0;Genes=RecD_0_IVD,Cas2_2_CAS-I-II-III-IV-V-VI,Cas1_6_CAS-I-II-III-IV-V-VI,CasR_4_CAS-III-D,Csm3gr7_4_CAS-III-A-III-D,Csx19_1_CAS-III-D,Csm3gr7_2_CAS-III-A-III-D,Cas10_7_CAS-III,CasR_4_CAS-III-D,Cas6_7_CAS-I-II-III-IV-V-VI,Csx20_1_CAS-I-III;Positions=22,26,27,29,30,31,32,34,35,36,37;E-values=3.30e-94,1.20e-24,1.20e-89,8.00e-247,8.10e-67,4.60e-06,1.60e-26,4.20e-60,3.70e-297,3.90e-40,1.90e-28;CoverageSeq=0.992,0.885,0.509,0.998,0.934,0.623,0.65,0.737,0.998,0.988,0.992;CoverageHMM=0.975,0.987,1.0,0.987,0.938,0.625,0.994,0.985,1.0,0.975,0.968;Strand_Interference=-1;Strand_Adaptation=NA
SEQF1881.1|JH591179.1	CCTyper	CDS	38908	40644	579	-	.	ID=SEQF1881.1|JH591179.1_34_cas;Genome_ID=SEQF1881.1;Feature_type=CDS;Product=Cas Prediction : Cas10_7_CAS-III;coding_strand=-;E-value=4.2000000000000004e-60;Score=201.3;Coverage_Seq=0.7374784110535406;Coverage_Hmm=0.9853658536585366
SEQF1881.1|JH591168.1	CCTyper	CDS	133451	134392	314	+	.	ID=SEQF1881.1|JH591168.1_127_cas;Genome_ID=SEQF1881.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IE;coding_strand=+;E-value=5.0000000000000004e-105;Score=347.9;Coverage_Seq=0.8535031847133758;Coverage_Hmm=0.9925650557620818
SEQF1881.1|JH591179.1	CCTyper	CDS	28166	30085	640	+	.	ID=SEQF1881.1|JH591179.1_27_cas;Genome_ID=SEQF1881.1;Feature_type=CDS;Product=Cas Prediction : Cas1_6_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.2e-89;Score=298.2;Coverage_Seq=0.509375;Coverage_Hmm=1.0
SEQF1881.1|JH591179.1	CCTyper	CDS	27897	28157	87	+	.	ID=SEQF1881.1|JH591179.1_26_cas;Genome_ID=SEQF1881.1;Feature_type=CDS;Product=Cas Prediction : Cas2_2_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.2e-24;Score=83.7;Coverage_Seq=0.8850574712643678;Coverage_Hmm=0.9873417721518988
SEQF1881.1|JH591168.1	CCTyper	CDS	125744	128521	926	+	.	ID=SEQF1881.1|JH591168.1_120_cas;Genome_ID=SEQF1881.1;Feature_type=CDS;Product=Cas Prediction : Cas3_0_CAS-I;coding_strand=+;E-value=3.5000000000000004e-73;Score=244.1;Coverage_Seq=0.43628509719222464;Coverage_Hmm=0.9773371104815864
SEQF1881.1|JH591168.1	CCTyper	CDS	131901	132623	241	+	.	ID=SEQF1881.1|JH591168.1_124_cas;Genome_ID=SEQF1881.1;Feature_type=CDS;Product=Cas Prediction : Cas5_0_IE;coding_strand=+;E-value=2.0000000000000003e-45;Score=152.7;Coverage_Seq=0.8672199170124482;Coverage_Hmm=0.9739130434782609
SEQF1881.1|JH591179.1	CCTyper	CDS	42337	43077	247	-	.	ID=SEQF1881.1|JH591179.1_36_cas;Genome_ID=SEQF1881.1;Feature_type=CDS;Product=Cas Prediction : Cas6_7_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=3.9e-40;Score=135.7;Coverage_Seq=0.9878542510121457;Coverage_Hmm=0.975103734439834
SEQF1881.1|JH591168.1	CCTyper	CDS	132625	133134	170	+	.	ID=SEQF1881.1|JH591168.1_125_cas;Genome_ID=SEQF1881.1;Feature_type=CDS;Product=Cas Prediction : Cas6e_2_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.3e-17;Score=62.3;Coverage_Seq=0.6058823529411764;Coverage_Hmm=0.5
SEQF1881.1|JH591168.1	CCTyper	CDS	133155	133454	100	+	.	ID=SEQF1881.1|JH591168.1_126_cas;Genome_ID=SEQF1881.1;Feature_type=CDS;Product=Cas Prediction : Cas6e_2_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=7.100000000000001e-22;Score=76.1;Coverage_Seq=0.94;Coverage_Hmm=0.4752475247524752
SEQF1881.1|JH591168.1	CCTyper	CDS	130774	131889	372	+	.	ID=SEQF1881.1|JH591168.1_123_cas;Genome_ID=SEQF1881.1;Feature_type=CDS;Product=Cas Prediction : Cas7_1_CAS-I-E;coding_strand=+;E-value=2.1e-114;Score=380.1;Coverage_Seq=0.9435483870967742;Coverage_Hmm=0.9916434540389972
SEQF1881.1|JH591168.1	CCTyper	CDS	128508	130196	563	+	.	ID=SEQF1881.1|JH591168.1_121_cas;Genome_ID=SEQF1881.1;Feature_type=CDS;Product=Cas Prediction : Cas8e_4_CAS-I-E;coding_strand=+;E-value=1.8e-90;Score=301.6;Coverage_Seq=0.8934280639431617;Coverage_Hmm=0.9806451612903225
SEQF1881.1|JH591179.1	CCTyper	CDS	31129	32691	521	-	.	ID=SEQF1881.1|JH591179.1_29_cas;Genome_ID=SEQF1881.1;Feature_type=CDS;Product=Cas Prediction : CasR_4_CAS-III-D;coding_strand=-;E-value=8e-247;Score=817.9;Coverage_Seq=0.9980806142034548;Coverage_Hmm=0.9867924528301887
SEQF1881.1|JH591179.1	CCTyper	CDS	40673	42286	538	-	.	ID=SEQF1881.1|JH591179.1_35_cas;Genome_ID=SEQF1881.1;Feature_type=CDS;Product=Cas Prediction : CasR_4_CAS-III-D;coding_strand=-;E-value=3.7e-297;Score=984.0;Coverage_Seq=0.9981412639405205;Coverage_Hmm=1.0
SEQF1881.1|JH591168.1	CCTyper	CDS	130206	130784	193	+	.	ID=SEQF1881.1|JH591168.1_122_cas;Genome_ID=SEQF1881.1;Feature_type=CDS;Product=Cas Prediction : Cse2gr11_5_CAS-I-E;coding_strand=+;E-value=4.5000000000000003e-66;Score=219.7;Coverage_Seq=0.9844559585492227;Coverage_Hmm=0.9748743718592965
SEQF1881.1|JH591179.1	CCTyper	CDS	35138	36613	492	-	.	ID=SEQF1881.1|JH591179.1_32_cas;Genome_ID=SEQF1881.1;Feature_type=CDS;Product=Cas Prediction : Csm3gr7_2_CAS-III-A-III-D;coding_strand=-;E-value=1.6e-26;Score=91.3;Coverage_Seq=0.6504065040650406;Coverage_Hmm=0.9944444444444445
SEQF1881.1|JH591179.1	CCTyper	CDS	32727	34625	633	-	.	ID=SEQF1881.1|JH591179.1_30_cas;Genome_ID=SEQF1881.1;Feature_type=CDS;Product=Cas Prediction : Csm3gr7_4_CAS-III-A-III-D;coding_strand=-;E-value=8.1e-67;Score=224.0;Coverage_Seq=0.933649289099526;Coverage_Hmm=0.9375
SEQF1881.1|JH591179.1	CCTyper	CDS	34615	35163	183	-	.	ID=SEQF1881.1|JH591179.1_31_cas;Genome_ID=SEQF1881.1;Feature_type=CDS;Product=Cas Prediction : Csx19_1_CAS-III-D;coding_strand=-;E-value=4.6e-06;Score=23.6;Coverage_Seq=0.6229508196721312;Coverage_Hmm=0.625
SEQF1881.1|JH591179.1	CCTyper	CDS	43104	43460	119	-	.	ID=SEQF1881.1|JH591179.1_37_cas;Genome_ID=SEQF1881.1;Feature_type=CDS;Product=Cas Prediction : Csx20_1_CAS-I-III;coding_strand=-;E-value=1.9000000000000003e-28;Score=97.0;Coverage_Seq=0.9915966386554622;Coverage_Hmm=0.968
SEQF1881.1|JH591168.1	CCTyper	CDS	134394	135290	299	+	.	ID=SEQF1881.1|JH591168.1_128_cas;Genome_ID=SEQF1881.1;Feature_type=CDS;Product=Cas Prediction : DEDDh_0_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=3.6e-34;Score=115.7;Coverage_Seq=0.5183946488294314;Coverage_Hmm=0.9875
SEQF1881.1|JH591179.1	CCTyper	CDS	20616	22850	745	-	.	ID=SEQF1881.1|JH591179.1_22_cas;Genome_ID=SEQF1881.1;Feature_type=CDS;Product=Cas Prediction : RecD_0_IVD;coding_strand=-;E-value=3.3e-94;Score=313.9;Coverage_Seq=0.9919463087248322;Coverage_Hmm=0.9750982961992136