SEQF2019.1|GL622241.1	CCTyper	repeat_region	1990944	1991624	681	+	.	ID=SEQF2019.1|GL622241.1_1;Genome_ID=SEQF2019.1;Note=Predictor:CCtyper;Start:1990944;End:1991624;Consensus_Repeat:GTTCTCGTCCCCTCTTATACGGGGTGGGTTCCGATT;Number_of_Repeats:10;Repeat_Length:36;Average_Spacer_Length:35.7;Repeat_Identity:96.0;Spacer_Identity:42.5;Spacer_Length_Sem:0.5;Trusted:True;Cas_Type_Prediction: III-A;Cas_Subtype_Prediction:III-A;Subtype_Probability:0.998;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	direct_repeat	1990944	1990979	36	+	.	ID=SEQF2019.1|GL622241.1_1_REPEAT1;Parent=SEQF2019.1|GL622241.1_1;Note=CCATTTGGCCCCTCTTATACGGGGTGGGTTCCGATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	binding_site	1990980	1991015	36	+	.	ID=SEQF2019.1|GL622241.1_1_SPACER1;Parent=SEQF2019.1|GL622241.1_1;Note=TCTGATGACAAATGAAAAAAAGGCTATAAGCGAGAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	direct_repeat	1991016	1991051	36	+	.	ID=SEQF2019.1|GL622241.1_1_REPEAT2;Parent=SEQF2019.1|GL622241.1_1;Note=GTTCTCGTCCCCTCTTATACGGGGTGGGTTCCGATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	binding_site	1991052	1991087	36	+	.	ID=SEQF2019.1|GL622241.1_1_SPACER2;Parent=SEQF2019.1|GL622241.1_1;Note=TCGTGAATTTGTGGATGGAGATATGATTTACTTAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	direct_repeat	1991088	1991123	36	+	.	ID=SEQF2019.1|GL622241.1_1_REPEAT3;Parent=SEQF2019.1|GL622241.1_1;Note=GTTCTCGTCCCCTCTTATACGGGGTGGGTTCCGATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	binding_site	1991124	1991159	36	+	.	ID=SEQF2019.1|GL622241.1_1_SPACER3;Parent=SEQF2019.1|GL622241.1_1;Note=CAAAGCACCACCTTAATTTGAATAAGTGAGTGATAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	direct_repeat	1991160	1991195	36	+	.	ID=SEQF2019.1|GL622241.1_1_REPEAT4;Parent=SEQF2019.1|GL622241.1_1;Note=GTTCTCGTCCCCTCTTATACGGGGTGGGTTCCGATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	binding_site	1991196	1991230	35	+	.	ID=SEQF2019.1|GL622241.1_1_SPACER4;Parent=SEQF2019.1|GL622241.1_1;Note=TACACATACCGTGCACCATATTTTGTTGTTCGTGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	direct_repeat	1991231	1991266	36	+	.	ID=SEQF2019.1|GL622241.1_1_REPEAT5;Parent=SEQF2019.1|GL622241.1_1;Note=GTTCTCGTCCCCTCTTATACGGGGTGGGTTCCGATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	binding_site	1991267	1991300	34	+	.	ID=SEQF2019.1|GL622241.1_1_SPACER5;Parent=SEQF2019.1|GL622241.1_1;Note=TAATGCTTCACTTGTCAATTCTTTTAAATTTTCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	direct_repeat	1991301	1991336	36	+	.	ID=SEQF2019.1|GL622241.1_1_REPEAT6;Parent=SEQF2019.1|GL622241.1_1;Note=GTTCTCGTCCCCTCTTATACGGGGTGGGTTCCGATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	binding_site	1991337	1991374	38	+	.	ID=SEQF2019.1|GL622241.1_1_SPACER6;Parent=SEQF2019.1|GL622241.1_1;Note=ACTAAGCGAATGACACCACTTGAAGCATACAAGTTGCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	direct_repeat	1991375	1991410	36	+	.	ID=SEQF2019.1|GL622241.1_1_REPEAT7;Parent=SEQF2019.1|GL622241.1_1;Note=GTTCTCGTCCCCTCTTATACGGGGTGGGTTCCGATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	binding_site	1991411	1991443	33	+	.	ID=SEQF2019.1|GL622241.1_1_SPACER7;Parent=SEQF2019.1|GL622241.1_1;Note=ACTTTTACAGGAGATAAGAGAAAAATATGATCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	direct_repeat	1991444	1991479	36	+	.	ID=SEQF2019.1|GL622241.1_1_REPEAT8;Parent=SEQF2019.1|GL622241.1_1;Note=GTTCTCGTCCCCTCTTATACGGGGTGGGTTCCGATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	binding_site	1991480	1991515	36	+	.	ID=SEQF2019.1|GL622241.1_1_SPACER8;Parent=SEQF2019.1|GL622241.1_1;Note=TTGATGATGAATGGTGGGCAGTGGCGAAGGATGTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	direct_repeat	1991516	1991551	36	+	.	ID=SEQF2019.1|GL622241.1_1_REPEAT9;Parent=SEQF2019.1|GL622241.1_1;Note=GTTCTCGTCCCCTCTTATACGGGGTGGGTTCCGATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	binding_site	1991552	1991588	37	+	.	ID=SEQF2019.1|GL622241.1_1_SPACER9;Parent=SEQF2019.1|GL622241.1_1;Note=GGGTAAGGATAGTGAAATAGATGCAGTGGAAGCATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	direct_repeat	1991589	1991624	36	+	.	ID=SEQF2019.1|GL622241.1_1_REPEAT10;Parent=SEQF2019.1|GL622241.1_1;Note=GTTCTCGTCCCCTCTTATACGGGGTGGGTTCCGATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	repeat_region	2000414	2001586	1173	+	.	ID=SEQF2019.1|GL622241.1_2;Genome_ID=SEQF2019.1;Note=Predictor:CCtyper;Start:2000414;End:2001586;Consensus_Repeat:GTTCTCGTCCCCTCTTATACGGGGTGGGTTCCGATT;Number_of_Repeats:17;Repeat_Length:36;Average_Spacer_Length:35.1;Repeat_Identity:100.0;Spacer_Identity:44.3;Spacer_Length_Sem:0.3;Trusted:True;Cas_Type_Prediction: III-A;Cas_Subtype_Prediction:III-A;Subtype_Probability:0.998;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	direct_repeat	2000414	2000449	36	+	.	ID=SEQF2019.1|GL622241.1_2_REPEAT1;Parent=SEQF2019.1|GL622241.1_2;Note=ATAAGTGTCCCCTCTTATACGGGGTGGGTTCCGATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	binding_site	2000450	2000485	36	+	.	ID=SEQF2019.1|GL622241.1_2_SPACER1;Parent=SEQF2019.1|GL622241.1_2;Note=GCAAGAACGATTGTAGATAGCGATGCATTTCTAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	direct_repeat	2000486	2000521	36	+	.	ID=SEQF2019.1|GL622241.1_2_REPEAT2;Parent=SEQF2019.1|GL622241.1_2;Note=GTTCTCGTCCCCTCTTATACGGGGTGGGTTCCGATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	binding_site	2000522	2000557	36	+	.	ID=SEQF2019.1|GL622241.1_2_SPACER2;Parent=SEQF2019.1|GL622241.1_2;Note=AGGAATCATTAAAGTGAAAAATATCAAAAAAGCAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	direct_repeat	2000558	2000593	36	+	.	ID=SEQF2019.1|GL622241.1_2_REPEAT3;Parent=SEQF2019.1|GL622241.1_2;Note=GTTCTCGTCCCCTCTTATACGGGGTGGGTTCCGATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	binding_site	2000594	2000627	34	+	.	ID=SEQF2019.1|GL622241.1_2_SPACER3;Parent=SEQF2019.1|GL622241.1_2;Note=CGTGAACCAAGAAAATGAATTGTACGTAATGAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	direct_repeat	2000628	2000663	36	+	.	ID=SEQF2019.1|GL622241.1_2_REPEAT4;Parent=SEQF2019.1|GL622241.1_2;Note=GTTCTCGTCCCCTCTTATACGGGGTGGGTTCCGATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	binding_site	2000664	2000699	36	+	.	ID=SEQF2019.1|GL622241.1_2_SPACER4;Parent=SEQF2019.1|GL622241.1_2;Note=AGATCATTGGGAAAACAGCAATGGCTTAACATCGGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	direct_repeat	2000700	2000735	36	+	.	ID=SEQF2019.1|GL622241.1_2_REPEAT5;Parent=SEQF2019.1|GL622241.1_2;Note=GTTCTCGTCCCCTCTTATACGGGGTGGGTTCCGATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	binding_site	2000736	2000771	36	+	.	ID=SEQF2019.1|GL622241.1_2_SPACER5;Parent=SEQF2019.1|GL622241.1_2;Note=CAAAAATGCCAATCTGATTTATCCTGGTCAAGTCCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	direct_repeat	2000772	2000807	36	+	.	ID=SEQF2019.1|GL622241.1_2_REPEAT6;Parent=SEQF2019.1|GL622241.1_2;Note=GTTCTCGTCCCCTCTTATACGGGGTGGGTTCCGATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	binding_site	2000808	2000842	35	+	.	ID=SEQF2019.1|GL622241.1_2_SPACER6;Parent=SEQF2019.1|GL622241.1_2;Note=GAATACTTACAACAATATGACGATGAAGCATTTGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	direct_repeat	2000843	2000878	36	+	.	ID=SEQF2019.1|GL622241.1_2_REPEAT7;Parent=SEQF2019.1|GL622241.1_2;Note=GTTCTCGTCCCCTCTTATACGGGGTGGGTTCCGATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	binding_site	2000879	2000913	35	+	.	ID=SEQF2019.1|GL622241.1_2_SPACER7;Parent=SEQF2019.1|GL622241.1_2;Note=ACTTTGACTGGTGAAGATGAAATTAGATACTAAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	direct_repeat	2000914	2000949	36	+	.	ID=SEQF2019.1|GL622241.1_2_REPEAT8;Parent=SEQF2019.1|GL622241.1_2;Note=GTTCTCGTCCCCTCTTATACGGGGTGGGTTCCGATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	binding_site	2000950	2000985	36	+	.	ID=SEQF2019.1|GL622241.1_2_SPACER8;Parent=SEQF2019.1|GL622241.1_2;Note=CTCTTTGTCAATTTCTTTTAACGTTTTCAGTGCTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	direct_repeat	2000986	2001021	36	+	.	ID=SEQF2019.1|GL622241.1_2_REPEAT9;Parent=SEQF2019.1|GL622241.1_2;Note=GTTCTCGTCCCCTCTTATACGGGGTGGGTTCCGATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	binding_site	2001022	2001054	33	+	.	ID=SEQF2019.1|GL622241.1_2_SPACER9;Parent=SEQF2019.1|GL622241.1_2;Note=TTTACGCATATCAAACATATTGCTATTAGTATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	direct_repeat	2001055	2001090	36	+	.	ID=SEQF2019.1|GL622241.1_2_REPEAT10;Parent=SEQF2019.1|GL622241.1_2;Note=GTTCTCGTCCCCTCTTATACGGGGTGGGTTCCGATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	binding_site	2001091	2001125	35	+	.	ID=SEQF2019.1|GL622241.1_2_SPACER10;Parent=SEQF2019.1|GL622241.1_2;Note=AACAGCAAAGCACAAACGGAATCATGGCACAAGCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	direct_repeat	2001126	2001161	36	+	.	ID=SEQF2019.1|GL622241.1_2_REPEAT11;Parent=SEQF2019.1|GL622241.1_2;Note=GTTCTCGTCCCCTCTTATACGGGGTGGGTTCCGATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	binding_site	2001162	2001198	37	+	.	ID=SEQF2019.1|GL622241.1_2_SPACER11;Parent=SEQF2019.1|GL622241.1_2;Note=AACATCATTGCAAGAATCATGGTAGAACGTGGATTGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	direct_repeat	2001199	2001234	36	+	.	ID=SEQF2019.1|GL622241.1_2_REPEAT12;Parent=SEQF2019.1|GL622241.1_2;Note=GTTCTCGTCCCCTCTTATACGGGGTGGGTTCCGATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	binding_site	2001235	2001269	35	+	.	ID=SEQF2019.1|GL622241.1_2_SPACER12;Parent=SEQF2019.1|GL622241.1_2;Note=AAAACTTACCAAAATGCTAAGATTTCTGTGACGAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	direct_repeat	2001270	2001305	36	+	.	ID=SEQF2019.1|GL622241.1_2_REPEAT13;Parent=SEQF2019.1|GL622241.1_2;Note=GTTCTCGTCCCCTCTTATACGGGGTGGGTTCCGATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	binding_site	2001306	2001338	33	+	.	ID=SEQF2019.1|GL622241.1_2_SPACER13;Parent=SEQF2019.1|GL622241.1_2;Note=AACAACTTGAAAACTTAATAGCTTTCATAAGTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	direct_repeat	2001339	2001374	36	+	.	ID=SEQF2019.1|GL622241.1_2_REPEAT14;Parent=SEQF2019.1|GL622241.1_2;Note=GTTCTCGTCCCCTCTTATACGGGGTGGGTTCCGATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	binding_site	2001375	2001409	35	+	.	ID=SEQF2019.1|GL622241.1_2_SPACER14;Parent=SEQF2019.1|GL622241.1_2;Note=AGGAAATAAAAATGACAAACGAAAAAGTAAGAGGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	direct_repeat	2001410	2001445	36	+	.	ID=SEQF2019.1|GL622241.1_2_REPEAT15;Parent=SEQF2019.1|GL622241.1_2;Note=GTTCTCGTCCCCTCTTATACGGGGTGGGTTCCGATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	binding_site	2001446	2001479	34	+	.	ID=SEQF2019.1|GL622241.1_2_SPACER15;Parent=SEQF2019.1|GL622241.1_2;Note=ATACAGACAAAGCAATAGATAATTACAACTATTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	direct_repeat	2001480	2001515	36	+	.	ID=SEQF2019.1|GL622241.1_2_REPEAT16;Parent=SEQF2019.1|GL622241.1_2;Note=GTTCTCGTCCCCTCTTATACGGGGTGGGTTCCGATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	binding_site	2001516	2001550	35	+	.	ID=SEQF2019.1|GL622241.1_2_SPACER16;Parent=SEQF2019.1|GL622241.1_2;Note=ACATACTTTAAAGATAAAGAGTTTGGATACGCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	direct_repeat	2001551	2001586	36	+	.	ID=SEQF2019.1|GL622241.1_2_REPEAT17;Parent=SEQF2019.1|GL622241.1_2;Note=GTTCTCGTCCCCTCTTATACGGGGTGGGTTCCGATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	repeat_region	2036680	2038236	1557	+	.	ID=SEQF2019.1|GL622241.1_3;Genome_ID=SEQF2019.1;Note=Predictor:CCtyper;Start:2036680;End:2038236;Consensus_Repeat:GTTTTGGAAGCATTCGATTCAACATAGCTCTAAAAC;Number_of_Repeats:24;Repeat_Length:36;Average_Spacer_Length:30.1;Repeat_Identity:100.0;Spacer_Identity:42.2;Spacer_Length_Sem:0.1;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.982;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	direct_repeat	2036680	2036715	36	+	.	ID=SEQF2019.1|GL622241.1_3_REPEAT1;Parent=SEQF2019.1|GL622241.1_3;Note=TAGAAAACACTATTCGAATCAACATAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	binding_site	2036716	2036745	30	+	.	ID=SEQF2019.1|GL622241.1_3_SPACER1;Parent=SEQF2019.1|GL622241.1_3;Note=GACCAACGTGTGCAACTGGAAGAAGCATTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	direct_repeat	2036746	2036781	36	+	.	ID=SEQF2019.1|GL622241.1_3_REPEAT2;Parent=SEQF2019.1|GL622241.1_3;Note=GTTTTGGAAGCATTCGATTCAACATAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	binding_site	2036782	2036811	30	+	.	ID=SEQF2019.1|GL622241.1_3_SPACER2;Parent=SEQF2019.1|GL622241.1_3;Note=AGTAAAACTCGTCATAGTAAGCACACAATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	direct_repeat	2036812	2036847	36	+	.	ID=SEQF2019.1|GL622241.1_3_REPEAT3;Parent=SEQF2019.1|GL622241.1_3;Note=GTTTTGGAAGCATTCGATTCAACATAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	binding_site	2036848	2036877	30	+	.	ID=SEQF2019.1|GL622241.1_3_SPACER3;Parent=SEQF2019.1|GL622241.1_3;Note=GTATCAAAGCCCATCTTGAAAATACTTCCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	direct_repeat	2036878	2036913	36	+	.	ID=SEQF2019.1|GL622241.1_3_REPEAT4;Parent=SEQF2019.1|GL622241.1_3;Note=GTTTTGGAAGCATTCGATTCAACATAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	binding_site	2036914	2036943	30	+	.	ID=SEQF2019.1|GL622241.1_3_SPACER4;Parent=SEQF2019.1|GL622241.1_3;Note=TTGCAAGTCTTTCTGCTCTCTCTACAATCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	direct_repeat	2036944	2036979	36	+	.	ID=SEQF2019.1|GL622241.1_3_REPEAT5;Parent=SEQF2019.1|GL622241.1_3;Note=GTTTTGGAAGCATTCGATTCAACATAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	binding_site	2036980	2037009	30	+	.	ID=SEQF2019.1|GL622241.1_3_SPACER5;Parent=SEQF2019.1|GL622241.1_3;Note=AACTCACTATGGATGGCGGCTTATCCAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	direct_repeat	2037010	2037045	36	+	.	ID=SEQF2019.1|GL622241.1_3_REPEAT6;Parent=SEQF2019.1|GL622241.1_3;Note=GTTTTGGAAGCATTCGATTCAACATAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	binding_site	2037046	2037075	30	+	.	ID=SEQF2019.1|GL622241.1_3_SPACER6;Parent=SEQF2019.1|GL622241.1_3;Note=TATTTTCGAGGATGATTCTTGCTTTTTCTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	direct_repeat	2037076	2037111	36	+	.	ID=SEQF2019.1|GL622241.1_3_REPEAT7;Parent=SEQF2019.1|GL622241.1_3;Note=GTTTTGGAAGCATTCGATTCAACATAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	binding_site	2037112	2037141	30	+	.	ID=SEQF2019.1|GL622241.1_3_SPACER7;Parent=SEQF2019.1|GL622241.1_3;Note=ATTTTTATGTACAAACAGGCACACAAAACG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	direct_repeat	2037142	2037177	36	+	.	ID=SEQF2019.1|GL622241.1_3_REPEAT8;Parent=SEQF2019.1|GL622241.1_3;Note=GTTTTGGAAGCATTCGATTCAACATAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	binding_site	2037178	2037208	31	+	.	ID=SEQF2019.1|GL622241.1_3_SPACER8;Parent=SEQF2019.1|GL622241.1_3;Note=CGGCGTGACAACCGGCAACAATTTTTCGCCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	direct_repeat	2037209	2037244	36	+	.	ID=SEQF2019.1|GL622241.1_3_REPEAT9;Parent=SEQF2019.1|GL622241.1_3;Note=GTTTTGGAAGCATTCGATTCAACATAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	binding_site	2037245	2037274	30	+	.	ID=SEQF2019.1|GL622241.1_3_SPACER9;Parent=SEQF2019.1|GL622241.1_3;Note=TGGCATATTGTGCGTAAAAAGCGTAAATTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	direct_repeat	2037275	2037310	36	+	.	ID=SEQF2019.1|GL622241.1_3_REPEAT10;Parent=SEQF2019.1|GL622241.1_3;Note=GTTTTGGAAGCATTCGATTCAACATAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	binding_site	2037311	2037340	30	+	.	ID=SEQF2019.1|GL622241.1_3_SPACER10;Parent=SEQF2019.1|GL622241.1_3;Note=CAGGTCTATATGAAGCGTTTAAAAACGTGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	direct_repeat	2037341	2037376	36	+	.	ID=SEQF2019.1|GL622241.1_3_REPEAT11;Parent=SEQF2019.1|GL622241.1_3;Note=GTTTTGGAAGCATTCGATTCAACATAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	binding_site	2037377	2037406	30	+	.	ID=SEQF2019.1|GL622241.1_3_SPACER11;Parent=SEQF2019.1|GL622241.1_3;Note=ACTATCAGTGTCGTGGATATCCTTTACAGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	direct_repeat	2037407	2037442	36	+	.	ID=SEQF2019.1|GL622241.1_3_REPEAT12;Parent=SEQF2019.1|GL622241.1_3;Note=GTTTTGGAAGCATTCGATTCAACATAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	binding_site	2037443	2037472	30	+	.	ID=SEQF2019.1|GL622241.1_3_SPACER12;Parent=SEQF2019.1|GL622241.1_3;Note=ATCTTAAAATTAGATCTCTTTGCTTTATCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	direct_repeat	2037473	2037508	36	+	.	ID=SEQF2019.1|GL622241.1_3_REPEAT13;Parent=SEQF2019.1|GL622241.1_3;Note=GTTTTGGAAGCATTCGATTCAACATAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	binding_site	2037509	2037538	30	+	.	ID=SEQF2019.1|GL622241.1_3_SPACER13;Parent=SEQF2019.1|GL622241.1_3;Note=CCGTTTTCGGAAGGAAAAATCAACTCGTCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	direct_repeat	2037539	2037574	36	+	.	ID=SEQF2019.1|GL622241.1_3_REPEAT14;Parent=SEQF2019.1|GL622241.1_3;Note=GTTTTGGAAGCATTCGATTCAACATAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	binding_site	2037575	2037604	30	+	.	ID=SEQF2019.1|GL622241.1_3_SPACER14;Parent=SEQF2019.1|GL622241.1_3;Note=AATACGATATGGATATTCTCACTAGCTATG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	direct_repeat	2037605	2037640	36	+	.	ID=SEQF2019.1|GL622241.1_3_REPEAT15;Parent=SEQF2019.1|GL622241.1_3;Note=GTTTTGGAAGCATTCGATTCAACATAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	binding_site	2037641	2037670	30	+	.	ID=SEQF2019.1|GL622241.1_3_SPACER15;Parent=SEQF2019.1|GL622241.1_3;Note=AATTGTACGGCGTAACTCCTGACACCGTAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	direct_repeat	2037671	2037706	36	+	.	ID=SEQF2019.1|GL622241.1_3_REPEAT16;Parent=SEQF2019.1|GL622241.1_3;Note=GTTTTGGAAGCATTCGATTCAACATAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	binding_site	2037707	2037738	32	+	.	ID=SEQF2019.1|GL622241.1_3_SPACER16;Parent=SEQF2019.1|GL622241.1_3;Note=GATATATCACCATTTTTGAACAAGGGTATAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	direct_repeat	2037739	2037774	36	+	.	ID=SEQF2019.1|GL622241.1_3_REPEAT17;Parent=SEQF2019.1|GL622241.1_3;Note=GTTTTGGAAGCATTCGATTCAACATAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	binding_site	2037775	2037804	30	+	.	ID=SEQF2019.1|GL622241.1_3_SPACER17;Parent=SEQF2019.1|GL622241.1_3;Note=ACGAAAGGTAAAGGATTTGTCATGCTGGGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	direct_repeat	2037805	2037840	36	+	.	ID=SEQF2019.1|GL622241.1_3_REPEAT18;Parent=SEQF2019.1|GL622241.1_3;Note=GTTTTGGAAGCATTCGATTCAACATAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	binding_site	2037841	2037870	30	+	.	ID=SEQF2019.1|GL622241.1_3_SPACER18;Parent=SEQF2019.1|GL622241.1_3;Note=GTACTTACGACCTTCAACATAGATCAAATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	direct_repeat	2037871	2037906	36	+	.	ID=SEQF2019.1|GL622241.1_3_REPEAT19;Parent=SEQF2019.1|GL622241.1_3;Note=GTTTTGGAAGCATTCGATTCAACATAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	binding_site	2037907	2037936	30	+	.	ID=SEQF2019.1|GL622241.1_3_SPACER19;Parent=SEQF2019.1|GL622241.1_3;Note=TGACTATTGTAAATTCTTTTTTTGCAGTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	direct_repeat	2037937	2037972	36	+	.	ID=SEQF2019.1|GL622241.1_3_REPEAT20;Parent=SEQF2019.1|GL622241.1_3;Note=GTTTTGGAAGCATTCGATTCAACATAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	binding_site	2037973	2038002	30	+	.	ID=SEQF2019.1|GL622241.1_3_SPACER20;Parent=SEQF2019.1|GL622241.1_3;Note=AACCCTAGCGCCATAAGCACGCTATTTAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	direct_repeat	2038003	2038038	36	+	.	ID=SEQF2019.1|GL622241.1_3_REPEAT21;Parent=SEQF2019.1|GL622241.1_3;Note=GTTTTGGAAGCATTCGATTCAACATAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	binding_site	2038039	2038068	30	+	.	ID=SEQF2019.1|GL622241.1_3_SPACER21;Parent=SEQF2019.1|GL622241.1_3;Note=TGGGACACTGGTTGGCTATCAAACAACATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	direct_repeat	2038069	2038104	36	+	.	ID=SEQF2019.1|GL622241.1_3_REPEAT22;Parent=SEQF2019.1|GL622241.1_3;Note=GTTTTGGAAGCATTCGATTCAACATAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	binding_site	2038105	2038134	30	+	.	ID=SEQF2019.1|GL622241.1_3_SPACER22;Parent=SEQF2019.1|GL622241.1_3;Note=AAGGTGTGCGAAACACAATACAAGAAATAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	direct_repeat	2038135	2038170	36	+	.	ID=SEQF2019.1|GL622241.1_3_REPEAT23;Parent=SEQF2019.1|GL622241.1_3;Note=GTTTTGGAAGCATTCGATTCAACATAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	binding_site	2038171	2038200	30	+	.	ID=SEQF2019.1|GL622241.1_3_SPACER23;Parent=SEQF2019.1|GL622241.1_3;Note=AAGGTCAAAGTCATCAAAAAAAGGAGTGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	direct_repeat	2038201	2038236	36	+	.	ID=SEQF2019.1|GL622241.1_3_REPEAT24;Parent=SEQF2019.1|GL622241.1_3;Note=GTTTTGGAAGCATTCGATTCAACATAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2019.1|GL622241.1	CCTyper	OPERON	1991736	2000335	8600	-	.	ID=SEQF2019.1|GL622241.1@49;Genome_ID=SEQF2019.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type III-A;Complete_Interference=100%;Complete_Adaptation=NA;Best_type=III-A;Best_score=20.0;Genes=Cas6_0_CAS-I-II-III-IV-V-VI,Csm6_0_IIIA,Csm5gr7_0_CAS-III-A-III-D,Csm4gr5_1_CAS-III-A,Csm3gr7_1_CAS-III-A-III-D,Csm2gr11_7_CAS-III-A,Cas10_1_CAS-III,Cas2_0_I-II-III,Cas1_0_II;Positions=1890,1891,1892,1893,1894,1895,1896,1897,1898;E-values=4.10e-21,1.20e-90,7.00e-28,2.90e-51,1.50e-74,4.20e-21,1.40e-211,6.80e-24,1.00e-87;CoverageSeq=0.8,0.856,0.766,0.984,0.926,0.695,0.845,0.892,0.921;CoverageHMM=0.912,1.0,0.622,0.975,0.963,0.836,1.0,0.927,0.996;Strand_Interference=-1;Strand_Adaptation=NA
SEQF2019.1|GL622241.1	CCTyper	OPERON	2038355	2044203	5849	-	.	ID=SEQF2019.1|GL622241.1@50;Genome_ID=SEQF2019.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Csn2_1_CAS-II-A,Cas2_5_CAS-I-II-III-IV-V-VI,Cas1_4_CAS-I-II-III-IV-V-VI,Cas9_1_II;Positions=1933,1934,1935,1936;E-values=5.40e-103,4.60e-47,1.40e-98,0.00e+00;CoverageSeq=0.982,0.957,0.931,0.997;CoverageHMM=0.991,0.974,0.996,0.998;Strand_Interference=-1;Strand_Adaptation=-1
SEQF2019.1|GL622241.1	CCTyper	CDS	1996798	1999065	756	-	.	ID=SEQF2019.1|GL622241.1_1896_cas;Genome_ID=SEQF2019.1;Feature_type=CDS;Product=Cas Prediction : Cas10_1_CAS-III;coding_strand=-;E-value=1.4000000000000001e-211;Score=701.6;Coverage_Seq=0.8452380952380952;Coverage_Hmm=1.0
SEQF2019.1|GL622241.1	CCTyper	CDS	1999427	2000335	303	-	.	ID=SEQF2019.1|GL622241.1_1898_cas;Genome_ID=SEQF2019.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_II;coding_strand=-;E-value=1e-87;Score=291.0;Coverage_Seq=0.9207920792079208;Coverage_Hmm=0.9964028776978417
SEQF2019.1|GL622241.1	CCTyper	CDS	2039342	2040208	289	-	.	ID=SEQF2019.1|GL622241.1_1935_cas;Genome_ID=SEQF2019.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.4000000000000001e-98;Score=326.6;Coverage_Seq=0.9307958477508651;Coverage_Hmm=0.9963636363636363
SEQF2019.1|GL622241.1	CCTyper	CDS	1999122	1999427	102	-	.	ID=SEQF2019.1|GL622241.1_1897_cas;Genome_ID=SEQF2019.1;Feature_type=CDS;Product=Cas Prediction : Cas2_0_I-II-III;coding_strand=-;E-value=6.8e-24;Score=81.1;Coverage_Seq=0.8921568627450981;Coverage_Hmm=0.9270833333333334
SEQF2019.1|GL622241.1	CCTyper	CDS	2039001	2039345	115	-	.	ID=SEQF2019.1|GL622241.1_1934_cas;Genome_ID=SEQF2019.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=4.6e-47;Score=156.2;Coverage_Seq=0.9565217391304348;Coverage_Hmm=0.9741379310344828
SEQF2019.1|GL622241.1	CCTyper	CDS	1991736	1992470	245	-	.	ID=SEQF2019.1|GL622241.1_1890_cas;Genome_ID=SEQF2019.1;Feature_type=CDS;Product=Cas Prediction : Cas6_0_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=4.1e-21;Score=73.3;Coverage_Seq=0.8;Coverage_Hmm=0.9123711340206185
SEQF2019.1|GL622241.1	CCTyper	CDS	2040211	2044203	1331	-	.	ID=SEQF2019.1|GL622241.1_1936_cas;Genome_ID=SEQF2019.1;Feature_type=CDS;Product=Cas Prediction : Cas9_1_II;coding_strand=-;E-value=0.0;Score=1053.9;Coverage_Seq=0.9969947407963937;Coverage_Hmm=0.9982142857142857
SEQF2019.1|GL622241.1	CCTyper	CDS	1996376	1996798	141	-	.	ID=SEQF2019.1|GL622241.1_1895_cas;Genome_ID=SEQF2019.1;Feature_type=CDS;Product=Cas Prediction : Csm2gr11_7_CAS-III-A;coding_strand=-;E-value=4.2e-21;Score=73.1;Coverage_Seq=0.6950354609929078;Coverage_Hmm=0.8363636363636363
SEQF2019.1|GL622241.1	CCTyper	CDS	1995730	1996374	215	-	.	ID=SEQF2019.1|GL622241.1_1894_cas;Genome_ID=SEQF2019.1;Feature_type=CDS;Product=Cas Prediction : Csm3gr7_1_CAS-III-A-III-D;coding_strand=-;E-value=1.5e-74;Score=247.5;Coverage_Seq=0.9255813953488372;Coverage_Hmm=0.9627906976744186
SEQF2019.1|GL622241.1	CCTyper	CDS	1994806	1995720	305	-	.	ID=SEQF2019.1|GL622241.1_1893_cas;Genome_ID=SEQF2019.1;Feature_type=CDS;Product=Cas Prediction : Csm4gr5_1_CAS-III-A;coding_strand=-;E-value=2.9e-51;Score=171.7;Coverage_Seq=0.9836065573770492;Coverage_Hmm=0.9746031746031746
SEQF2019.1|GL622241.1	CCTyper	CDS	1993760	1994809	350	-	.	ID=SEQF2019.1|GL622241.1_1892_cas;Genome_ID=SEQF2019.1;Feature_type=CDS;Product=Cas Prediction : Csm5gr7_0_CAS-III-A-III-D;coding_strand=-;E-value=7e-28;Score=95.0;Coverage_Seq=0.7657142857142857;Coverage_Hmm=0.6219178082191781
SEQF2019.1|GL622241.1	CCTyper	CDS	1992467	1993759	431	-	.	ID=SEQF2019.1|GL622241.1_1891_cas;Genome_ID=SEQF2019.1;Feature_type=CDS;Product=Cas Prediction : Csm6_0_IIIA;coding_strand=-;E-value=1.1999999999999999e-90;Score=301.1;Coverage_Seq=0.8561484918793504;Coverage_Hmm=1.0
SEQF2019.1|GL622241.1	CCTyper	CDS	2038355	2039014	220	-	.	ID=SEQF2019.1|GL622241.1_1933_cas;Genome_ID=SEQF2019.1;Feature_type=CDS;Product=Cas Prediction : Csn2_1_CAS-II-A;coding_strand=-;E-value=5.4e-103;Score=340.4;Coverage_Seq=0.9818181818181818;Coverage_Hmm=0.9908256880733946