SEQF2100.2|AEHR01000017.1	CCTyper	repeat_region	116495	116728	234	+	.	ID=SEQF2100.2|AEHR01000017.1_1;Genome_ID=SEQF2100.2;Note=Predictor:CCtyper;Start:116495;End:116728;Consensus_Repeat:GTTTTACCTAGTGCATAAATTACATAACTCTCAAAC;Number_of_Repeats:4;Repeat_Length:36;Average_Spacer_Length:30;Repeat_Identity:97.3;Spacer_Identity:42.9;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.522;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2100.2|AEHR01000017.1	CCTyper	direct_repeat	116495	116530	36	+	.	ID=SEQF2100.2|AEHR01000017.1_1_REPEAT1;Parent=SEQF2100.2|AEHR01000017.1_1;Note=GTTTTACCTGGTGCATAAATTACATAACTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2100.2|AEHR01000017.1	CCTyper	binding_site	116531	116560	30	+	.	ID=SEQF2100.2|AEHR01000017.1_1_SPACER1;Parent=SEQF2100.2|AEHR01000017.1_1;Note=TCAGTAGCAGATCGATCTAGCCTTTTTGGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2100.2|AEHR01000017.1	CCTyper	direct_repeat	116561	116596	36	+	.	ID=SEQF2100.2|AEHR01000017.1_1_REPEAT2;Parent=SEQF2100.2|AEHR01000017.1_1;Note=GTTTTACCTAGTGCATAAATTACATAACTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2100.2|AEHR01000017.1	CCTyper	binding_site	116597	116626	30	+	.	ID=SEQF2100.2|AEHR01000017.1_1_SPACER2;Parent=SEQF2100.2|AEHR01000017.1_1;Note=TACAAGCTAATATTTTGAAAAATGTATATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2100.2|AEHR01000017.1	CCTyper	direct_repeat	116627	116662	36	+	.	ID=SEQF2100.2|AEHR01000017.1_1_REPEAT3;Parent=SEQF2100.2|AEHR01000017.1_1;Note=GTTTTACCTAGTGCATAAATTACATAACTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2100.2|AEHR01000017.1	CCTyper	binding_site	116663	116692	30	+	.	ID=SEQF2100.2|AEHR01000017.1_1_SPACER3;Parent=SEQF2100.2|AEHR01000017.1_1;Note=GTCATCATGGCAGACGCATCACATAAAAGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2100.2|AEHR01000017.1	CCTyper	direct_repeat	116693	116728	36	+	.	ID=SEQF2100.2|AEHR01000017.1_1_REPEAT4;Parent=SEQF2100.2|AEHR01000017.1_1;Note=GTTTTACCTAGTGCATAAATTACATAACTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2100.2|AEHR01000017.1	CCTyper	OPERON	116770	122724	5955	-	.	ID=SEQF2100.2|AEHR01000017.1@7;Genome_ID=SEQF2100.2;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Csn2_0_CAS-II-A,Cas2_9_CAS-I-II-III-IV-V-VI,Cas1_4_CAS-I-II-III-IV-V-VI,Cas9_0_II,Cas9_0_II,Cas9_1_CAS-II-C,Cas9_0_II;Positions=126,127,128,129,130,131,132;E-values=9.70e-65,1.10e-31,8.60e-89,7.00e-77,3.10e-26,5.70e-15,2.30e-36;CoverageSeq=0.995,0.98,0.925,0.599,0.865,0.653,0.944;CoverageHMM=1.0,0.97,1.0,0.482,0.18,0.305,0.143;Strand_Interference=-1;Strand_Adaptation=-1
SEQF2100.2|AEHR01000017.1	CCTyper	CDS	117743	118621	293	-	.	ID=SEQF2100.2|AEHR01000017.1_128_cas;Genome_ID=SEQF2100.2;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=8.6e-89;Score=293.6;Coverage_Seq=0.9249146757679181;Coverage_Hmm=1.0
SEQF2100.2|AEHR01000017.1	CCTyper	CDS	117432	117728	99	-	.	ID=SEQF2100.2|AEHR01000017.1_127_cas;Genome_ID=SEQF2100.2;Feature_type=CDS;Product=Cas Prediction : Cas2_9_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.1e-31;Score=105.3;Coverage_Seq=0.9797979797979798;Coverage_Hmm=0.9702970297029703
SEQF2100.2|AEHR01000017.1	CCTyper	CDS	118618	120621	668	-	.	ID=SEQF2100.2|AEHR01000017.1_129_cas;Genome_ID=SEQF2100.2;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=-;E-value=7e-77;Score=255.7;Coverage_Seq=0.5988023952095808;Coverage_Hmm=0.4819277108433735
SEQF2100.2|AEHR01000017.1	CCTyper	CDS	120834	121388	185	-	.	ID=SEQF2100.2|AEHR01000017.1_130_cas;Genome_ID=SEQF2100.2;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=-;E-value=3.1e-26;Score=88.2;Coverage_Seq=0.8648648648648649;Coverage_Hmm=0.17951807228915662
SEQF2100.2|AEHR01000017.1	CCTyper	CDS	122296	122724	143	-	.	ID=SEQF2100.2|AEHR01000017.1_132_cas;Genome_ID=SEQF2100.2;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=-;E-value=2.3e-36;Score=121.7;Coverage_Seq=0.9440559440559441;Coverage_Hmm=0.14337349397590363
SEQF2100.2|AEHR01000017.1	CCTyper	CDS	121382	122194	271	-	.	ID=SEQF2100.2|AEHR01000017.1_131_cas;Genome_ID=SEQF2100.2;Feature_type=CDS;Product=Cas Prediction : Cas9_1_CAS-II-C;coding_strand=-;E-value=5.7e-15;Score=51.3;Coverage_Seq=0.6531365313653137;Coverage_Hmm=0.3045774647887324
SEQF2100.2|AEHR01000017.1	CCTyper	CDS	116770	117435	222	-	.	ID=SEQF2100.2|AEHR01000017.1_126_cas;Genome_ID=SEQF2100.2;Feature_type=CDS;Product=Cas Prediction : Csn2_0_CAS-II-A;coding_strand=-;E-value=9.7e-65;Score=214.4;Coverage_Seq=0.9954954954954955;Coverage_Hmm=1.0