SEQF2220.2|AFNM01000049.1	CCTyper	repeat_region	4145	5235	1091	+	.	ID=SEQF2220.2|AFNM01000049.1_1;Genome_ID=SEQF2220.2;Note=Predictor:CCtyper;Start:4145;End:5235;Consensus_Repeat:GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Number_of_Repeats:17;Repeat_Length:36;Average_Spacer_Length:29.9;Repeat_Identity:100.0;Spacer_Identity:39.9;Spacer_Length_Sem:0.1;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.549;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2220.2|AFNM01000049.1	CCTyper	direct_repeat	4145	4180	36	+	.	ID=SEQF2220.2|AFNM01000049.1_1_REPEAT1;Parent=SEQF2220.2|AFNM01000049.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2220.2|AFNM01000049.1	CCTyper	binding_site	4181	4210	30	+	.	ID=SEQF2220.2|AFNM01000049.1_1_SPACER1;Parent=SEQF2220.2|AFNM01000049.1_1;Note=AAAATCTAATTATTATTAGGTACATAAATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2220.2|AFNM01000049.1	CCTyper	direct_repeat	4211	4246	36	+	.	ID=SEQF2220.2|AFNM01000049.1_1_REPEAT2;Parent=SEQF2220.2|AFNM01000049.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2220.2|AFNM01000049.1	CCTyper	binding_site	4247	4276	30	+	.	ID=SEQF2220.2|AFNM01000049.1_1_SPACER2;Parent=SEQF2220.2|AFNM01000049.1_1;Note=TCCATGACGAATACGAAAAAGGCAAGTACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2220.2|AFNM01000049.1	CCTyper	direct_repeat	4277	4312	36	+	.	ID=SEQF2220.2|AFNM01000049.1_1_REPEAT3;Parent=SEQF2220.2|AFNM01000049.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2220.2|AFNM01000049.1	CCTyper	binding_site	4313	4342	30	+	.	ID=SEQF2220.2|AFNM01000049.1_1_SPACER3;Parent=SEQF2220.2|AFNM01000049.1_1;Note=GTCACCGCTACCGCTGAAGCCTCCAGATTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2220.2|AFNM01000049.1	CCTyper	direct_repeat	4343	4378	36	+	.	ID=SEQF2220.2|AFNM01000049.1_1_REPEAT4;Parent=SEQF2220.2|AFNM01000049.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2220.2|AFNM01000049.1	CCTyper	binding_site	4379	4408	30	+	.	ID=SEQF2220.2|AFNM01000049.1_1_SPACER4;Parent=SEQF2220.2|AFNM01000049.1_1;Note=GCTCGAACACATCACCGCTCGTATCAAGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2220.2|AFNM01000049.1	CCTyper	direct_repeat	4409	4444	36	+	.	ID=SEQF2220.2|AFNM01000049.1_1_REPEAT5;Parent=SEQF2220.2|AFNM01000049.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2220.2|AFNM01000049.1	CCTyper	binding_site	4445	4474	30	+	.	ID=SEQF2220.2|AFNM01000049.1_1_SPACER5;Parent=SEQF2220.2|AFNM01000049.1_1;Note=CAAATTTCAGCCTGTTGTTCAGTATTTCTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2220.2|AFNM01000049.1	CCTyper	direct_repeat	4475	4510	36	+	.	ID=SEQF2220.2|AFNM01000049.1_1_REPEAT6;Parent=SEQF2220.2|AFNM01000049.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2220.2|AFNM01000049.1	CCTyper	binding_site	4511	4540	30	+	.	ID=SEQF2220.2|AFNM01000049.1_1_SPACER6;Parent=SEQF2220.2|AFNM01000049.1_1;Note=CTACTCCTGCGATATTTCTATTAAAGCTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2220.2|AFNM01000049.1	CCTyper	direct_repeat	4541	4576	36	+	.	ID=SEQF2220.2|AFNM01000049.1_1_REPEAT7;Parent=SEQF2220.2|AFNM01000049.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2220.2|AFNM01000049.1	CCTyper	binding_site	4577	4606	30	+	.	ID=SEQF2220.2|AFNM01000049.1_1_SPACER7;Parent=SEQF2220.2|AFNM01000049.1_1;Note=TTAAAGAATCTGAGTATAGACGAATCTTAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2220.2|AFNM01000049.1	CCTyper	direct_repeat	4607	4642	36	+	.	ID=SEQF2220.2|AFNM01000049.1_1_REPEAT8;Parent=SEQF2220.2|AFNM01000049.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2220.2|AFNM01000049.1	CCTyper	binding_site	4643	4672	30	+	.	ID=SEQF2220.2|AFNM01000049.1_1_SPACER8;Parent=SEQF2220.2|AFNM01000049.1_1;Note=CAGCCCCTTGAAAATAAACTGTGCGCCGTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2220.2|AFNM01000049.1	CCTyper	direct_repeat	4673	4708	36	+	.	ID=SEQF2220.2|AFNM01000049.1_1_REPEAT9;Parent=SEQF2220.2|AFNM01000049.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2220.2|AFNM01000049.1	CCTyper	binding_site	4709	4737	29	+	.	ID=SEQF2220.2|AFNM01000049.1_1_SPACER9;Parent=SEQF2220.2|AFNM01000049.1_1;Note=CAATAAAAAAGGAGAAAAACATGATTAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2220.2|AFNM01000049.1	CCTyper	direct_repeat	4738	4773	36	+	.	ID=SEQF2220.2|AFNM01000049.1_1_REPEAT10;Parent=SEQF2220.2|AFNM01000049.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2220.2|AFNM01000049.1	CCTyper	binding_site	4774	4803	30	+	.	ID=SEQF2220.2|AFNM01000049.1_1_SPACER10;Parent=SEQF2220.2|AFNM01000049.1_1;Note=TGCAGGTTTTGGCTGGGTGTTTGATTGTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2220.2|AFNM01000049.1	CCTyper	direct_repeat	4804	4839	36	+	.	ID=SEQF2220.2|AFNM01000049.1_1_REPEAT11;Parent=SEQF2220.2|AFNM01000049.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2220.2|AFNM01000049.1	CCTyper	binding_site	4840	4869	30	+	.	ID=SEQF2220.2|AFNM01000049.1_1_SPACER11;Parent=SEQF2220.2|AFNM01000049.1_1;Note=GGGAATGATTGTGATTTCGTCGTTAGTAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2220.2|AFNM01000049.1	CCTyper	direct_repeat	4870	4905	36	+	.	ID=SEQF2220.2|AFNM01000049.1_1_REPEAT12;Parent=SEQF2220.2|AFNM01000049.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2220.2|AFNM01000049.1	CCTyper	binding_site	4906	4935	30	+	.	ID=SEQF2220.2|AFNM01000049.1_1_SPACER12;Parent=SEQF2220.2|AFNM01000049.1_1;Note=TGAGTTGAAAGAGACAAGTCCGAAACGGTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2220.2|AFNM01000049.1	CCTyper	direct_repeat	4936	4971	36	+	.	ID=SEQF2220.2|AFNM01000049.1_1_REPEAT13;Parent=SEQF2220.2|AFNM01000049.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2220.2|AFNM01000049.1	CCTyper	binding_site	4972	5001	30	+	.	ID=SEQF2220.2|AFNM01000049.1_1_SPACER13;Parent=SEQF2220.2|AFNM01000049.1_1;Note=AGTTACTTTTGAGAACATTGGGGTTGTTGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2220.2|AFNM01000049.1	CCTyper	direct_repeat	5002	5037	36	+	.	ID=SEQF2220.2|AFNM01000049.1_1_REPEAT14;Parent=SEQF2220.2|AFNM01000049.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2220.2|AFNM01000049.1	CCTyper	binding_site	5038	5067	30	+	.	ID=SEQF2220.2|AFNM01000049.1_1_SPACER14;Parent=SEQF2220.2|AFNM01000049.1_1;Note=GAGTTTATCAAGTCGGCTGCTTCAGCGACT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2220.2|AFNM01000049.1	CCTyper	direct_repeat	5068	5103	36	+	.	ID=SEQF2220.2|AFNM01000049.1_1_REPEAT15;Parent=SEQF2220.2|AFNM01000049.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2220.2|AFNM01000049.1	CCTyper	binding_site	5104	5133	30	+	.	ID=SEQF2220.2|AFNM01000049.1_1_SPACER15;Parent=SEQF2220.2|AFNM01000049.1_1;Note=CAAGTCGAATGTTACACGGCGAAGAACTGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2220.2|AFNM01000049.1	CCTyper	direct_repeat	5134	5169	36	+	.	ID=SEQF2220.2|AFNM01000049.1_1_REPEAT16;Parent=SEQF2220.2|AFNM01000049.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2220.2|AFNM01000049.1	CCTyper	binding_site	5170	5199	30	+	.	ID=SEQF2220.2|AFNM01000049.1_1_SPACER16;Parent=SEQF2220.2|AFNM01000049.1_1;Note=CTATTATATACATGTAACAAGTAAGCACCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2220.2|AFNM01000049.1	CCTyper	direct_repeat	5200	5235	36	+	.	ID=SEQF2220.2|AFNM01000049.1_1_REPEAT17;Parent=SEQF2220.2|AFNM01000049.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2220.2|AFNM01000020.1	CCTyper	repeat_region	54744	55233	490	+	.	ID=SEQF2220.2|AFNM01000020.1_2;Genome_ID=SEQF2220.2;Note=Predictor:CCtyper;Start:54744;End:55233;Consensus_Repeat:GTTTTTGTAGTCTCCAAAATTGTGACCGATAAAAC;Number_of_Repeats:8;Repeat_Length:35;Average_Spacer_Length:30.0;Repeat_Identity:100.0;Spacer_Identity:40.7;Spacer_Length_Sem:0.2;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:VI-A;Subtype_Probability:0.443;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2220.2|AFNM01000020.1	CCTyper	direct_repeat	54744	54778	35	+	.	ID=SEQF2220.2|AFNM01000020.1_2_REPEAT1;Parent=SEQF2220.2|AFNM01000020.1_2;Note=GTTTTTGTAGTCTCCAAAATTGTGACCGATAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2220.2|AFNM01000020.1	CCTyper	binding_site	54779	54808	30	+	.	ID=SEQF2220.2|AFNM01000020.1_2_SPACER1;Parent=SEQF2220.2|AFNM01000020.1_2;Note=TGGATGTCTTTCATTTGTTTGAACACCTAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2220.2|AFNM01000020.1	CCTyper	direct_repeat	54809	54843	35	+	.	ID=SEQF2220.2|AFNM01000020.1_2_REPEAT2;Parent=SEQF2220.2|AFNM01000020.1_2;Note=GTTTTTGTAGTCTCCAAAATTGTGACCGATAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2220.2|AFNM01000020.1	CCTyper	binding_site	54844	54873	30	+	.	ID=SEQF2220.2|AFNM01000020.1_2_SPACER2;Parent=SEQF2220.2|AFNM01000020.1_2;Note=TTGATGAACAGTATGTAGCTGAGGGACTAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2220.2|AFNM01000020.1	CCTyper	direct_repeat	54874	54908	35	+	.	ID=SEQF2220.2|AFNM01000020.1_2_REPEAT3;Parent=SEQF2220.2|AFNM01000020.1_2;Note=GTTTTTGTAGTCTCCAAAATTGTGACCGATAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2220.2|AFNM01000020.1	CCTyper	binding_site	54909	54939	31	+	.	ID=SEQF2220.2|AFNM01000020.1_2_SPACER3;Parent=SEQF2220.2|AFNM01000020.1_2;Note=TTCAAGATGGCCAAGAGGTAGGGAGTACAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2220.2|AFNM01000020.1	CCTyper	direct_repeat	54940	54974	35	+	.	ID=SEQF2220.2|AFNM01000020.1_2_REPEAT4;Parent=SEQF2220.2|AFNM01000020.1_2;Note=GTTTTTGTAGTCTCCAAAATTGTGACCGATAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2220.2|AFNM01000020.1	CCTyper	binding_site	54975	55004	30	+	.	ID=SEQF2220.2|AFNM01000020.1_2_SPACER4;Parent=SEQF2220.2|AFNM01000020.1_2;Note=TCTAACAGCTCGTTATAGGGCTTGTGATCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2220.2|AFNM01000020.1	CCTyper	direct_repeat	55005	55039	35	+	.	ID=SEQF2220.2|AFNM01000020.1_2_REPEAT5;Parent=SEQF2220.2|AFNM01000020.1_2;Note=GTTTTTGTAGTCTCCAAAATTGTGACCGATAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2220.2|AFNM01000020.1	CCTyper	binding_site	55040	55069	30	+	.	ID=SEQF2220.2|AFNM01000020.1_2_SPACER5;Parent=SEQF2220.2|AFNM01000020.1_2;Note=TGGAAAACGTGGAGCTTGTTTGGTTTTAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2220.2|AFNM01000020.1	CCTyper	direct_repeat	55070	55104	35	+	.	ID=SEQF2220.2|AFNM01000020.1_2_REPEAT6;Parent=SEQF2220.2|AFNM01000020.1_2;Note=GTTTTTGTAGTCTCCAAAATTGTGACCGATAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2220.2|AFNM01000020.1	CCTyper	binding_site	55105	55133	29	+	.	ID=SEQF2220.2|AFNM01000020.1_2_SPACER6;Parent=SEQF2220.2|AFNM01000020.1_2;Note=CTGCCTGTCGCTCCCTCGAAAATGCGACT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2220.2|AFNM01000020.1	CCTyper	direct_repeat	55134	55168	35	+	.	ID=SEQF2220.2|AFNM01000020.1_2_REPEAT7;Parent=SEQF2220.2|AFNM01000020.1_2;Note=GTTTTTGTAGTCTCCAAAATTGTGACCGATAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2220.2|AFNM01000020.1	CCTyper	binding_site	55169	55198	30	+	.	ID=SEQF2220.2|AFNM01000020.1_2_SPACER7;Parent=SEQF2220.2|AFNM01000020.1_2;Note=AACATCAGGTGGAGGAGGCCCTTCGTATCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2220.2|AFNM01000020.1	CCTyper	direct_repeat	55199	55233	35	+	.	ID=SEQF2220.2|AFNM01000020.1_2_REPEAT8;Parent=SEQF2220.2|AFNM01000020.1_2;Note=GTTTTTGTAGTCTCCAAAATTGTGACCGATAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2220.2|AFNM01000049.1	CCTyper	OPERON	3	4054	4052	+	.	ID=SEQF2220.2|AFNM01000049.1@1;Genome_ID=SEQF2220.2;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Cas9_0_II,Cas9_1_II,Cas1_4_CAS-I-II-III-IV-V-VI,Cas2_5_CAS-I-II-III-IV-V-VI,Csn2_1_CAS-II-A;Positions=1,2,3,4,5;E-values=1.20e-35,4.20e-74,2.00e-93,1.20e-47,1.00e-100;CoverageSeq=0.951,0.958,0.987,0.936,0.982;CoverageHMM=0.163,0.454,0.829,0.905,0.995;Strand_Interference=1;Strand_Adaptation=1
SEQF2220.2|AFNM01000049.1	CCTyper	CDS	2197	2886	230	+	.	ID=SEQF2220.2|AFNM01000049.1_3_cas;Genome_ID=SEQF2220.2;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=2e-93;Score=309.4;Coverage_Seq=0.9869565217391304;Coverage_Hmm=0.8290909090909091
SEQF2220.2|AFNM01000049.1	CCTyper	CDS	3073	3402	110	+	.	ID=SEQF2220.2|AFNM01000049.1_4_cas;Genome_ID=SEQF2220.2;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.2e-47;Score=157.9;Coverage_Seq=0.9363636363636364;Coverage_Hmm=0.9051724137931034
SEQF2220.2|AFNM01000049.1	CCTyper	CDS	3	428	142	+	.	ID=SEQF2220.2|AFNM01000049.1_1_cas;Genome_ID=SEQF2220.2;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=+;E-value=1.1999999999999999e-35;Score=120.0;Coverage_Seq=0.9507042253521126;Coverage_Hmm=0.16265060240963855
SEQF2220.2|AFNM01000049.1	CCTyper	CDS	545	2197	551	+	.	ID=SEQF2220.2|AFNM01000049.1_2_cas;Genome_ID=SEQF2220.2;Feature_type=CDS;Product=Cas Prediction : Cas9_1_II;coding_strand=+;E-value=4.2e-74;Score=247.2;Coverage_Seq=0.9582577132486388;Coverage_Hmm=0.4544642857142857
SEQF2220.2|AFNM01000049.1	CCTyper	CDS	3392	4054	221	+	.	ID=SEQF2220.2|AFNM01000049.1_5_cas;Genome_ID=SEQF2220.2;Feature_type=CDS;Product=Cas Prediction : Csn2_1_CAS-II-A;coding_strand=+;E-value=1e-100;Score=332.8;Coverage_Seq=0.9819004524886877;Coverage_Hmm=0.9954128440366973