SEQF2280.2|AFDI01000010.1	CCTyper	repeat_region	4	215	212	+	.	ID=SEQF2280.2|AFDI01000010.1_1;Genome_ID=SEQF2280.2;Note=Predictor:CCtyper;Start:4;End:215;Consensus_Repeat:GGGATCACCCCCGCGTATGCGGGAAATAC;Number_of_Repeats:4;Repeat_Length:29;Average_Spacer_Length:32;Repeat_Identity:96.7;Spacer_Identity:49.1;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: I-E;Cas_Subtype_Prediction:I-E;Subtype_Probability:0.988;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2280.2|AFDI01000010.1	CCTyper	direct_repeat	4	32	29	+	.	ID=SEQF2280.2|AFDI01000010.1_1_REPEAT1;Parent=SEQF2280.2|AFDI01000010.1_1;Note=GGGATCACCCCCGCGTATGCGGGAAATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2280.2|AFDI01000010.1	CCTyper	binding_site	33	64	32	+	.	ID=SEQF2280.2|AFDI01000010.1_1_SPACER1;Parent=SEQF2280.2|AFDI01000010.1_1;Note=TACTGAAAGTACAATGGTTATTAATTCTTCTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2280.2|AFDI01000010.1	CCTyper	direct_repeat	65	93	29	+	.	ID=SEQF2280.2|AFDI01000010.1_1_REPEAT2;Parent=SEQF2280.2|AFDI01000010.1_1;Note=GGGATCACCCCCGCGTATGCGGGAAATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2280.2|AFDI01000010.1	CCTyper	binding_site	94	125	32	+	.	ID=SEQF2280.2|AFDI01000010.1_1_SPACER2;Parent=SEQF2280.2|AFDI01000010.1_1;Note=TATATAATGGTATTTTGTGCTCTTGATATTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2280.2|AFDI01000010.1	CCTyper	direct_repeat	126	154	29	+	.	ID=SEQF2280.2|AFDI01000010.1_1_REPEAT3;Parent=SEQF2280.2|AFDI01000010.1_1;Note=AGGATCACCCCCGCGTATGCGGGAAATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2280.2|AFDI01000010.1	CCTyper	binding_site	155	186	32	+	.	ID=SEQF2280.2|AFDI01000010.1_1_SPACER3;Parent=SEQF2280.2|AFDI01000010.1_1;Note=CTATCTTTTGTGTTTTCATAGCTTGTATTGTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2280.2|AFDI01000010.1	CCTyper	direct_repeat	187	215	29	+	.	ID=SEQF2280.2|AFDI01000010.1_1_REPEAT4;Parent=SEQF2280.2|AFDI01000010.1_1;Note=GGGATCACCCCCGCGTATGCGGGAAATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2280.2|AFDI01000008.1	CCTyper	repeat_region	426611	427121	511	+	.	ID=SEQF2280.2|AFDI01000008.1_2;Genome_ID=SEQF2280.2;Note=Predictor:CCtyper;Start:426611;End:427121;Consensus_Repeat:ACCCCCGCGTATGCGGGAAATAC;Number_of_Repeats:9;Repeat_Length:23;Average_Spacer_Length:38;Repeat_Identity:92.0;Spacer_Identity:47.0;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:IV-A1;Subtype_Probability:0.224;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2280.2|AFDI01000008.1	CCTyper	direct_repeat	426611	426633	23	+	.	ID=SEQF2280.2|AFDI01000008.1_2_REPEAT1;Parent=SEQF2280.2|AFDI01000008.1_2;Note=TATCCAGCGTATGCGGGAAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2280.2|AFDI01000008.1	CCTyper	binding_site	426634	426671	38	+	.	ID=SEQF2280.2|AFDI01000008.1_2_SPACER1;Parent=SEQF2280.2|AFDI01000008.1_2;Note=GTGGTTATACCCGCCGCGTTTTTAGGGTGCTTAGGATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2280.2|AFDI01000008.1	CCTyper	direct_repeat	426672	426694	23	+	.	ID=SEQF2280.2|AFDI01000008.1_2_REPEAT2;Parent=SEQF2280.2|AFDI01000008.1_2;Note=ACCCCCGCGTATGCGGGAAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2280.2|AFDI01000008.1	CCTyper	binding_site	426695	426732	38	+	.	ID=SEQF2280.2|AFDI01000008.1_2_SPACER2;Parent=SEQF2280.2|AFDI01000008.1_2;Note=CAAGTCGCCAGCTGGATTCGTAAAACTCCACGAGGATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2280.2|AFDI01000008.1	CCTyper	direct_repeat	426733	426755	23	+	.	ID=SEQF2280.2|AFDI01000008.1_2_REPEAT3;Parent=SEQF2280.2|AFDI01000008.1_2;Note=ACCCCCGCGTATGCGGGAAATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2280.2|AFDI01000008.1	CCTyper	binding_site	426756	426793	38	+	.	ID=SEQF2280.2|AFDI01000008.1_2_SPACER3;Parent=SEQF2280.2|AFDI01000008.1_2;Note=TATTAGCAACATTAACCAAATTATCAAGTTCAGGGATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2280.2|AFDI01000008.1	CCTyper	direct_repeat	426794	426816	23	+	.	ID=SEQF2280.2|AFDI01000008.1_2_REPEAT4;Parent=SEQF2280.2|AFDI01000008.1_2;Note=ACCCCCGCGTATGCGGGAAATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2280.2|AFDI01000008.1	CCTyper	binding_site	426817	426854	38	+	.	ID=SEQF2280.2|AFDI01000008.1_2_SPACER4;Parent=SEQF2280.2|AFDI01000008.1_2;Note=ATATACATCATCGCCAATCATTAAAGGATTTCGGGATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2280.2|AFDI01000008.1	CCTyper	direct_repeat	426855	426877	23	+	.	ID=SEQF2280.2|AFDI01000008.1_2_REPEAT5;Parent=SEQF2280.2|AFDI01000008.1_2;Note=ACCCCCGCGTATGCGGGAAATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2280.2|AFDI01000008.1	CCTyper	binding_site	426878	426915	38	+	.	ID=SEQF2280.2|AFDI01000008.1_2_SPACER5;Parent=SEQF2280.2|AFDI01000008.1_2;Note=TTACAAACACTAATAAAACATATGATACAAGCGGGATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2280.2|AFDI01000008.1	CCTyper	direct_repeat	426916	426938	23	+	.	ID=SEQF2280.2|AFDI01000008.1_2_REPEAT6;Parent=SEQF2280.2|AFDI01000008.1_2;Note=ACCCCCGCGTATGCGGGAAATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2280.2|AFDI01000008.1	CCTyper	binding_site	426939	426976	38	+	.	ID=SEQF2280.2|AFDI01000008.1_2_SPACER6;Parent=SEQF2280.2|AFDI01000008.1_2;Note=AAAACACAGCAAAAGATAATAACACTCGCACAGGGATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2280.2|AFDI01000008.1	CCTyper	direct_repeat	426977	426999	23	+	.	ID=SEQF2280.2|AFDI01000008.1_2_REPEAT7;Parent=SEQF2280.2|AFDI01000008.1_2;Note=ACCCCCGCGTATGCGGGAAATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2280.2|AFDI01000008.1	CCTyper	binding_site	427000	427037	38	+	.	ID=SEQF2280.2|AFDI01000008.1_2_SPACER7;Parent=SEQF2280.2|AFDI01000008.1_2;Note=GTGAAAAGACAAGAGAAAAGCTTTTCACATGAGGGATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2280.2|AFDI01000008.1	CCTyper	direct_repeat	427038	427060	23	+	.	ID=SEQF2280.2|AFDI01000008.1_2_REPEAT8;Parent=SEQF2280.2|AFDI01000008.1_2;Note=ACCCCCGCGTATGCGGGAAATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2280.2|AFDI01000008.1	CCTyper	binding_site	427061	427098	38	+	.	ID=SEQF2280.2|AFDI01000008.1_2_SPACER8;Parent=SEQF2280.2|AFDI01000008.1_2;Note=TTTTTGCGACAACTTTAGATAGTATGATGCTTAGGATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2280.2|AFDI01000008.1	CCTyper	direct_repeat	427099	427121	23	+	.	ID=SEQF2280.2|AFDI01000008.1_2_REPEAT9;Parent=SEQF2280.2|AFDI01000008.1_2;Note=ACCCCCGCGTATGCGGGAAATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2280.2|AFDI01000010.1	CCTyper	OPERON	322	10283	9962	-	.	ID=SEQF2280.2|AFDI01000010.1@1;Genome_ID=SEQF2280.2;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-E;Complete_Interference=100%;Complete_Adaptation=50%;Best_type=I-E;Best_score=24.0;Genes=DEDDh_0_CAS-I-II-III-IV-V-VI,Cas1_0_IE,Cas6e_2_CAS-I-II-III-IV-V-VI,Cas5_1_CAS-I-E,Cas7_1_CAS-I-E,Cse2gr11_5_CAS-I-E,Cas8e_4_CAS-I-E,Cas3_0_CAS-I;Positions=1,2,3,4,5,6,7,8;E-values=2.30e-31,2.20e-107,4.40e-51,2.20e-40,1.30e-119,5.50e-58,5.70e-104,3.80e-68;CoverageSeq=0.472,0.854,0.968,0.565,0.95,0.956,0.883,0.446;CoverageHMM=0.994,0.993,0.995,0.994,0.997,0.945,0.989,0.989;Strand_Interference=-1;Strand_Adaptation=-1
SEQF2280.2|AFDI01000010.1	CCTyper	CDS	1403	2344	314	-	.	ID=SEQF2280.2|AFDI01000010.1_2_cas;Genome_ID=SEQF2280.2;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IE;coding_strand=-;E-value=2.1999999999999998e-107;Score=354.5;Coverage_Seq=0.8535031847133758;Coverage_Hmm=0.9925650557620818
SEQF2280.2|AFDI01000010.1	CCTyper	CDS	7446	10283	946	-	.	ID=SEQF2280.2|AFDI01000010.1_8_cas;Genome_ID=SEQF2280.2;Feature_type=CDS;Product=Cas Prediction : Cas3_0_CAS-I;coding_strand=-;E-value=3.7999999999999996e-68;Score=226.4;Coverage_Seq=0.44608879492600423;Coverage_Hmm=0.9886685552407932
SEQF2280.2|AFDI01000010.1	CCTyper	CDS	3018	3893	292	-	.	ID=SEQF2280.2|AFDI01000010.1_4_cas;Genome_ID=SEQF2280.2;Feature_type=CDS;Product=Cas Prediction : Cas5_1_CAS-I-E;coding_strand=-;E-value=2.2e-40;Score=134.6;Coverage_Seq=0.565068493150685;Coverage_Hmm=0.9944444444444445
SEQF2280.2|AFDI01000010.1	CCTyper	CDS	2370	3017	216	-	.	ID=SEQF2280.2|AFDI01000010.1_3_cas;Genome_ID=SEQF2280.2;Feature_type=CDS;Product=Cas Prediction : Cas6e_2_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=4.4e-51;Score=170.3;Coverage_Seq=0.9675925925925926;Coverage_Hmm=0.995049504950495
SEQF2280.2|AFDI01000010.1	CCTyper	CDS	3952	5040	363	-	.	ID=SEQF2280.2|AFDI01000010.1_5_cas;Genome_ID=SEQF2280.2;Feature_type=CDS;Product=Cas Prediction : Cas7_1_CAS-I-E;coding_strand=-;E-value=1.3e-119;Score=396.1;Coverage_Seq=0.9504132231404959;Coverage_Hmm=0.9972144846796658
SEQF2280.2|AFDI01000010.1	CCTyper	CDS	5772	7442	557	-	.	ID=SEQF2280.2|AFDI01000010.1_7_cas;Genome_ID=SEQF2280.2;Feature_type=CDS;Product=Cas Prediction : Cas8e_4_CAS-I-E;coding_strand=-;E-value=5.7e-104;Score=344.9;Coverage_Seq=0.8833034111310593;Coverage_Hmm=0.989247311827957
SEQF2280.2|AFDI01000010.1	CCTyper	CDS	5135	5749	205	-	.	ID=SEQF2280.2|AFDI01000010.1_6_cas;Genome_ID=SEQF2280.2;Feature_type=CDS;Product=Cas Prediction : Cse2gr11_5_CAS-I-E;coding_strand=-;E-value=5.5e-58;Score=192.1;Coverage_Seq=0.9560975609756097;Coverage_Hmm=0.9447236180904522
SEQF2280.2|AFDI01000010.1	CCTyper	CDS	322	1401	360	-	.	ID=SEQF2280.2|AFDI01000010.1_1_cas;Genome_ID=SEQF2280.2;Feature_type=CDS;Product=Cas Prediction : DEDDh_0_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=2.3e-31;Score=105.4;Coverage_Seq=0.4722222222222222;Coverage_Hmm=0.99375