SEQF2346.1|AJFW01000007.1	CCTyper	repeat_region	15253	15402	150	+	.	ID=SEQF2346.1|AJFW01000007.1_1;Genome_ID=SEQF2346.1;Note=Predictor:CCtyper;Start:15253;End:15402;Consensus_Repeat:GGATCACCCCCGCGTGTGCGGGAAAAAC;Number_of_Repeats:3;Repeat_Length:28;Average_Spacer_Length:33.0;Repeat_Identity:100.0;Spacer_Identity:40.4;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: I-E;Cas_Subtype_Prediction:I-E;Subtype_Probability:0.994;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2346.1|AJFW01000007.1	CCTyper	direct_repeat	15253	15280	28	+	.	ID=SEQF2346.1|AJFW01000007.1_1_REPEAT1;Parent=SEQF2346.1|AJFW01000007.1_1;Note=GGATCACCCCCGCGTGTGCGGGAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2346.1|AJFW01000007.1	CCTyper	binding_site	15281	15313	33	+	.	ID=SEQF2346.1|AJFW01000007.1_1_SPACER1;Parent=SEQF2346.1|AJFW01000007.1_1;Note=GATTGGAGGTGTGTCCTCTATCTCATAATTGCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2346.1|AJFW01000007.1	CCTyper	direct_repeat	15314	15341	28	+	.	ID=SEQF2346.1|AJFW01000007.1_1_REPEAT2;Parent=SEQF2346.1|AJFW01000007.1_1;Note=GGATCACCCCCGCGTGTGCGGGAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2346.1|AJFW01000007.1	CCTyper	binding_site	15342	15374	33	+	.	ID=SEQF2346.1|AJFW01000007.1_1_SPACER2;Parent=SEQF2346.1|AJFW01000007.1_1;Note=ATGTATGTATCTAGGAATATTGTTCCCTGACCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2346.1|AJFW01000007.1	CCTyper	direct_repeat	15375	15402	28	+	.	ID=SEQF2346.1|AJFW01000007.1_1_REPEAT3;Parent=SEQF2346.1|AJFW01000007.1_1;Note=GGATCACCCCCGCGTGTGCGGGAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2346.1|AJFW01000036.1	CCTyper	repeat_region	42	340	299	+	.	ID=SEQF2346.1|AJFW01000036.1_2;Genome_ID=SEQF2346.1;Note=Predictor:CCtyper;Start:42;End:340;Consensus_Repeat:GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Number_of_Repeats:5;Repeat_Length:36;Average_Spacer_Length:29.8;Repeat_Identity:95.8;Spacer_Identity:40.2;Spacer_Length_Sem:0.2;Trusted:True;Cas_Type_Prediction: II-C;Cas_Subtype_Prediction:II-C;Subtype_Probability:0.946;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2346.1|AJFW01000036.1	CCTyper	direct_repeat	42	77	36	+	.	ID=SEQF2346.1|AJFW01000036.1_2_REPEAT1;Parent=SEQF2346.1|AJFW01000036.1_2;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2346.1|AJFW01000036.1	CCTyper	binding_site	78	106	29	+	.	ID=SEQF2346.1|AJFW01000036.1_2_SPACER1;Parent=SEQF2346.1|AJFW01000036.1_2;Note=AAAATCCCAGACGATATCCCAGTGAATGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2346.1|AJFW01000036.1	CCTyper	direct_repeat	107	142	36	+	.	ID=SEQF2346.1|AJFW01000036.1_2_REPEAT2;Parent=SEQF2346.1|AJFW01000036.1_2;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2346.1|AJFW01000036.1	CCTyper	binding_site	143	172	30	+	.	ID=SEQF2346.1|AJFW01000036.1_2_SPACER2;Parent=SEQF2346.1|AJFW01000036.1_2;Note=TTTTCGTGGAATCTTCACGTTTGCGATTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2346.1|AJFW01000036.1	CCTyper	direct_repeat	173	208	36	+	.	ID=SEQF2346.1|AJFW01000036.1_2_REPEAT3;Parent=SEQF2346.1|AJFW01000036.1_2;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2346.1|AJFW01000036.1	CCTyper	binding_site	209	238	30	+	.	ID=SEQF2346.1|AJFW01000036.1_2_SPACER3;Parent=SEQF2346.1|AJFW01000036.1_2;Note=CCATATCAATCATGGTTTGATTCTTCTTCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2346.1|AJFW01000036.1	CCTyper	direct_repeat	239	274	36	+	.	ID=SEQF2346.1|AJFW01000036.1_2_REPEAT4;Parent=SEQF2346.1|AJFW01000036.1_2;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2346.1|AJFW01000036.1	CCTyper	binding_site	275	304	30	+	.	ID=SEQF2346.1|AJFW01000036.1_2_SPACER4;Parent=SEQF2346.1|AJFW01000036.1_2;Note=TTGTCCTTGGTACACAATCGGTTGCTGATG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2346.1|AJFW01000036.1	CCTyper	direct_repeat	305	340	36	+	.	ID=SEQF2346.1|AJFW01000036.1_2_REPEAT5;Parent=SEQF2346.1|AJFW01000036.1_2;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2346.1|AJFW01000044.1	CCTyper	repeat_region	44	375	332	+	.	ID=SEQF2346.1|AJFW01000044.1_3;Genome_ID=SEQF2346.1;Note=Predictor:CCtyper;Start:44;End:375;Consensus_Repeat:GTTTTTCCCGCACACGCGGGGGTGATCC;Number_of_Repeats:6;Repeat_Length:28;Average_Spacer_Length:32.8;Repeat_Identity:93.2;Spacer_Identity:44.3;Spacer_Length_Sem:0.2;Trusted:True;Cas_Type_Prediction: I-E;Cas_Subtype_Prediction:I-E;Subtype_Probability:0.994;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2346.1|AJFW01000044.1	CCTyper	direct_repeat	44	71	28	+	.	ID=SEQF2346.1|AJFW01000044.1_3_REPEAT1;Parent=SEQF2346.1|AJFW01000044.1_3;Note=GTTTTTCCCGCACACGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2346.1|AJFW01000044.1	CCTyper	binding_site	72	104	33	+	.	ID=SEQF2346.1|AJFW01000044.1_3_SPACER1;Parent=SEQF2346.1|AJFW01000044.1_3;Note=CAATCAAGCTCAGTGAAGAATAGCAACGATTGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2346.1|AJFW01000044.1	CCTyper	direct_repeat	105	132	28	+	.	ID=SEQF2346.1|AJFW01000044.1_3_REPEAT2;Parent=SEQF2346.1|AJFW01000044.1_3;Note=GTTTTTCCCGCACACGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2346.1|AJFW01000044.1	CCTyper	binding_site	133	165	33	+	.	ID=SEQF2346.1|AJFW01000044.1_3_SPACER2;Parent=SEQF2346.1|AJFW01000044.1_3;Note=CGAGATACACCTAGACCAGTTGCAATATTTGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2346.1|AJFW01000044.1	CCTyper	direct_repeat	166	193	28	+	.	ID=SEQF2346.1|AJFW01000044.1_3_REPEAT3;Parent=SEQF2346.1|AJFW01000044.1_3;Note=GTTTTTCCCGCACACGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2346.1|AJFW01000044.1	CCTyper	binding_site	194	226	33	+	.	ID=SEQF2346.1|AJFW01000044.1_3_SPACER3;Parent=SEQF2346.1|AJFW01000044.1_3;Note=CAGCATAGTCCTTCACTTTTGATAAGTGGTCAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2346.1|AJFW01000044.1	CCTyper	direct_repeat	227	254	28	+	.	ID=SEQF2346.1|AJFW01000044.1_3_REPEAT4;Parent=SEQF2346.1|AJFW01000044.1_3;Note=GTTTTTCTCGCACACGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2346.1|AJFW01000044.1	CCTyper	binding_site	255	287	33	+	.	ID=SEQF2346.1|AJFW01000044.1_3_SPACER4;Parent=SEQF2346.1|AJFW01000044.1_3;Note=TAAGGAGGGTTGAAATAGTTTGTTACTGTATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2346.1|AJFW01000044.1	CCTyper	direct_repeat	288	315	28	+	.	ID=SEQF2346.1|AJFW01000044.1_3_REPEAT5;Parent=SEQF2346.1|AJFW01000044.1_3;Note=ATTTTTCCCGCACACGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2346.1|AJFW01000044.1	CCTyper	binding_site	316	347	32	+	.	ID=SEQF2346.1|AJFW01000044.1_3_SPACER5;Parent=SEQF2346.1|AJFW01000044.1_3;Note=TAAGACTGGAACAGCAAATAGTGCAATAACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2346.1|AJFW01000044.1	CCTyper	direct_repeat	348	375	28	+	.	ID=SEQF2346.1|AJFW01000044.1_3_REPEAT6;Parent=SEQF2346.1|AJFW01000044.1_3;Note=GGTTTTTCCCGCACACGCGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2346.1|AJFW01000046.1	CCTyper	repeat_region	2	170	169	+	.	ID=SEQF2346.1|AJFW01000046.1_4;Genome_ID=SEQF2346.1;Note=Predictor:CCtyper;Start:2;End:170;Consensus_Repeat:AGTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Number_of_Repeats:3;Repeat_Length:37;Average_Spacer_Length:29.0;Repeat_Identity:100.0;Spacer_Identity:45.0;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: II-C;Cas_Subtype_Prediction:II-C;Subtype_Probability:0.988;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2346.1|AJFW01000046.1	CCTyper	direct_repeat	2	38	37	+	.	ID=SEQF2346.1|AJFW01000046.1_4_REPEAT1;Parent=SEQF2346.1|AJFW01000046.1_4;Note=AGTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2346.1|AJFW01000046.1	CCTyper	binding_site	39	67	29	+	.	ID=SEQF2346.1|AJFW01000046.1_4_SPACER1;Parent=SEQF2346.1|AJFW01000046.1_4;Note=TCATATATCCTGCTTCTTCTAAGATTTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2346.1|AJFW01000046.1	CCTyper	direct_repeat	68	104	37	+	.	ID=SEQF2346.1|AJFW01000046.1_4_REPEAT2;Parent=SEQF2346.1|AJFW01000046.1_4;Note=AGTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2346.1|AJFW01000046.1	CCTyper	binding_site	105	133	29	+	.	ID=SEQF2346.1|AJFW01000046.1_4_SPACER2;Parent=SEQF2346.1|AJFW01000046.1_4;Note=TTACACTTCCTAAAGAGGTTACCTTCCAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2346.1|AJFW01000046.1	CCTyper	direct_repeat	134	170	37	+	.	ID=SEQF2346.1|AJFW01000046.1_4_REPEAT3;Parent=SEQF2346.1|AJFW01000046.1_4;Note=AGTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2346.1|AJFW01000007.1	CCTyper	OPERON	15423	24751	9329	-	.	ID=SEQF2346.1|AJFW01000007.1@1;Genome_ID=SEQF2346.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-E;Complete_Interference=100%;Complete_Adaptation=50%;Best_type=I-E;Best_score=24.0;Genes=DEDDh_0_CAS-I-II-III-IV-V-VI,Cas1_0_IE,Cas6e_2_CAS-I-II-III-IV-V-VI,Cas5_0_IE,Cas7_1_CAS-I-E,Cse2gr11_5_CAS-I-E,Cas8e_4_CAS-I-E,Cas3_1_CAS-I;Positions=16,17,18,19,20,21,22,23;E-values=1.40e-35,3.10e-109,7.60e-49,1.70e-42,5.40e-117,1.10e-68,8.70e-93,7.60e-74;CoverageSeq=0.51,0.854,0.977,0.847,0.941,0.96,0.895,0.625;CoverageHMM=0.981,0.993,1.0,0.974,0.992,0.975,0.989,0.717;Strand_Interference=-1;Strand_Adaptation=-1
SEQF2346.1|AJFW01000046.1	CCTyper	OPERON	234	6103	5870	-	.	ID=SEQF2346.1|AJFW01000046.1@1;Genome_ID=SEQF2346.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-C;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-C;Best_score=9.0;Genes=Csn2_0_CAS-II-C,Cas2_5_CAS-I-II-III-IV-V-VI,Cas1_4_CAS-I-II-III-IV-V-VI,Cas9_0_II;Positions=1,2,3,4;E-values=7.40e-141,2.20e-32,2.60e-103,1.10e-190;CoverageSeq=0.989,0.954,0.908,0.688;CoverageHMM=0.997,0.888,0.996,0.976;Strand_Interference=-1;Strand_Adaptation=-1
SEQF2346.1|AJFW01000007.1	CCTyper	CDS	16330	17271	314	-	.	ID=SEQF2346.1|AJFW01000007.1_17_cas;Genome_ID=SEQF2346.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IE;coding_strand=-;E-value=3.1e-109;Score=361.1;Coverage_Seq=0.8535031847133758;Coverage_Hmm=0.9925650557620818
SEQF2346.1|AJFW01000046.1	CCTyper	CDS	1608	2519	304	-	.	ID=SEQF2346.1|AJFW01000046.1_3_cas;Genome_ID=SEQF2346.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=2.6e-103;Score=341.8;Coverage_Seq=0.9078947368421053;Coverage_Hmm=0.9963636363636363
SEQF2346.1|AJFW01000046.1	CCTyper	CDS	1283	1606	108	-	.	ID=SEQF2346.1|AJFW01000046.1_2_cas;Genome_ID=SEQF2346.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=2.2e-32;Score=108.6;Coverage_Seq=0.9537037037037037;Coverage_Hmm=0.8879310344827587
SEQF2346.1|AJFW01000007.1	CCTyper	CDS	21971	24751	927	-	.	ID=SEQF2346.1|AJFW01000007.1_23_cas;Genome_ID=SEQF2346.1;Feature_type=CDS;Product=Cas Prediction : Cas3_1_CAS-I;coding_strand=-;E-value=7.600000000000001e-74;Score=246.1;Coverage_Seq=0.6245954692556634;Coverage_Hmm=0.7167785234899329
SEQF2346.1|AJFW01000007.1	CCTyper	CDS	17900	18643	248	-	.	ID=SEQF2346.1|AJFW01000007.1_19_cas;Genome_ID=SEQF2346.1;Feature_type=CDS;Product=Cas Prediction : Cas5_0_IE;coding_strand=-;E-value=1.7e-42;Score=142.5;Coverage_Seq=0.8467741935483871;Coverage_Hmm=0.9739130434782609
SEQF2346.1|AJFW01000007.1	CCTyper	CDS	17275	17913	213	-	.	ID=SEQF2346.1|AJFW01000007.1_18_cas;Genome_ID=SEQF2346.1;Feature_type=CDS;Product=Cas Prediction : Cas6e_2_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=7.6e-49;Score=163.6;Coverage_Seq=0.9765258215962441;Coverage_Hmm=1.0
SEQF2346.1|AJFW01000007.1	CCTyper	CDS	18658	19725	356	-	.	ID=SEQF2346.1|AJFW01000007.1_20_cas;Genome_ID=SEQF2346.1;Feature_type=CDS;Product=Cas Prediction : Cas7_1_CAS-I-E;coding_strand=-;E-value=5.4e-117;Score=388.0;Coverage_Seq=0.9410112359550562;Coverage_Hmm=0.9916434540389972
SEQF2346.1|AJFW01000007.1	CCTyper	CDS	20323	21984	554	-	.	ID=SEQF2346.1|AJFW01000007.1_22_cas;Genome_ID=SEQF2346.1;Feature_type=CDS;Product=Cas Prediction : Cas8e_4_CAS-I-E;coding_strand=-;E-value=8.7e-93;Score=308.6;Coverage_Seq=0.8953068592057761;Coverage_Hmm=0.989247311827957
SEQF2346.1|AJFW01000046.1	CCTyper	CDS	2696	6103	1136	-	.	ID=SEQF2346.1|AJFW01000046.1_4_cas;Genome_ID=SEQF2346.1;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=-;E-value=1.0999999999999999e-190;Score=632.8;Coverage_Seq=0.6883802816901409;Coverage_Hmm=0.9759036144578314
SEQF2346.1|AJFW01000007.1	CCTyper	CDS	19715	20308	198	-	.	ID=SEQF2346.1|AJFW01000007.1_21_cas;Genome_ID=SEQF2346.1;Feature_type=CDS;Product=Cas Prediction : Cse2gr11_5_CAS-I-E;coding_strand=-;E-value=1.1e-68;Score=227.7;Coverage_Seq=0.9595959595959596;Coverage_Hmm=0.9748743718592965
SEQF2346.1|AJFW01000046.1	CCTyper	CDS	234	1286	351	-	.	ID=SEQF2346.1|AJFW01000046.1_1_cas;Genome_ID=SEQF2346.1;Feature_type=CDS;Product=Cas Prediction : Csn2_0_CAS-II-C;coding_strand=-;E-value=7.4e-141;Score=465.9;Coverage_Seq=0.9886039886039886;Coverage_Hmm=0.9969512195121951
SEQF2346.1|AJFW01000007.1	CCTyper	CDS	15423	16328	302	-	.	ID=SEQF2346.1|AJFW01000007.1_16_cas;Genome_ID=SEQF2346.1;Feature_type=CDS;Product=Cas Prediction : DEDDh_0_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.4e-35;Score=119.7;Coverage_Seq=0.5099337748344371;Coverage_Hmm=0.98125