SEQF2397.1|ALJO01000006.1	CCTyper	repeat_region	159682	160245	564	+	.	ID=SEQF2397.1|ALJO01000006.1_1;Genome_ID=SEQF2397.1;Note=Predictor:CCtyper;Start:159682;End:160245;Consensus_Repeat:GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC;Number_of_Repeats:9;Repeat_Length:36;Average_Spacer_Length:30;Repeat_Identity:100.0;Spacer_Identity:39.8;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.798;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2397.1|ALJO01000006.1	CCTyper	direct_repeat	159682	159717	36	+	.	ID=SEQF2397.1|ALJO01000006.1_1_REPEAT1;Parent=SEQF2397.1|ALJO01000006.1_1;Note=GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2397.1|ALJO01000006.1	CCTyper	binding_site	159718	159747	30	+	.	ID=SEQF2397.1|ALJO01000006.1_1_SPACER1;Parent=SEQF2397.1|ALJO01000006.1_1;Note=TTTTTCATCTGTACTTTCATCATTATTTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2397.1|ALJO01000006.1	CCTyper	direct_repeat	159748	159783	36	+	.	ID=SEQF2397.1|ALJO01000006.1_1_REPEAT2;Parent=SEQF2397.1|ALJO01000006.1_1;Note=GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2397.1|ALJO01000006.1	CCTyper	binding_site	159784	159813	30	+	.	ID=SEQF2397.1|ALJO01000006.1_1_SPACER2;Parent=SEQF2397.1|ALJO01000006.1_1;Note=GCGTTCTCGCTCGGTGATGAATCAAATGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2397.1|ALJO01000006.1	CCTyper	direct_repeat	159814	159849	36	+	.	ID=SEQF2397.1|ALJO01000006.1_1_REPEAT3;Parent=SEQF2397.1|ALJO01000006.1_1;Note=GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2397.1|ALJO01000006.1	CCTyper	binding_site	159850	159879	30	+	.	ID=SEQF2397.1|ALJO01000006.1_1_SPACER3;Parent=SEQF2397.1|ALJO01000006.1_1;Note=CTGATGATAAGCGTGAGTTCAAACGTATTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2397.1|ALJO01000006.1	CCTyper	direct_repeat	159880	159915	36	+	.	ID=SEQF2397.1|ALJO01000006.1_1_REPEAT4;Parent=SEQF2397.1|ALJO01000006.1_1;Note=GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2397.1|ALJO01000006.1	CCTyper	binding_site	159916	159945	30	+	.	ID=SEQF2397.1|ALJO01000006.1_1_SPACER4;Parent=SEQF2397.1|ALJO01000006.1_1;Note=GAGATGTATAAGGGGCAAAAAAGGGGCAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2397.1|ALJO01000006.1	CCTyper	direct_repeat	159946	159981	36	+	.	ID=SEQF2397.1|ALJO01000006.1_1_REPEAT5;Parent=SEQF2397.1|ALJO01000006.1_1;Note=GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2397.1|ALJO01000006.1	CCTyper	binding_site	159982	160011	30	+	.	ID=SEQF2397.1|ALJO01000006.1_1_SPACER5;Parent=SEQF2397.1|ALJO01000006.1_1;Note=GCGCTTGTGGACATTTTGAGCGTATAAGGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2397.1|ALJO01000006.1	CCTyper	direct_repeat	160012	160047	36	+	.	ID=SEQF2397.1|ALJO01000006.1_1_REPEAT6;Parent=SEQF2397.1|ALJO01000006.1_1;Note=GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2397.1|ALJO01000006.1	CCTyper	binding_site	160048	160077	30	+	.	ID=SEQF2397.1|ALJO01000006.1_1_SPACER6;Parent=SEQF2397.1|ALJO01000006.1_1;Note=AATGCAGAAAGCCCAAAAGAAGAATAAGCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2397.1|ALJO01000006.1	CCTyper	direct_repeat	160078	160113	36	+	.	ID=SEQF2397.1|ALJO01000006.1_1_REPEAT7;Parent=SEQF2397.1|ALJO01000006.1_1;Note=GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2397.1|ALJO01000006.1	CCTyper	binding_site	160114	160143	30	+	.	ID=SEQF2397.1|ALJO01000006.1_1_SPACER7;Parent=SEQF2397.1|ALJO01000006.1_1;Note=TTCTGACTGATACAGAAAGGGGGAAACACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2397.1|ALJO01000006.1	CCTyper	direct_repeat	160144	160179	36	+	.	ID=SEQF2397.1|ALJO01000006.1_1_REPEAT8;Parent=SEQF2397.1|ALJO01000006.1_1;Note=GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2397.1|ALJO01000006.1	CCTyper	binding_site	160180	160209	30	+	.	ID=SEQF2397.1|ALJO01000006.1_1_SPACER8;Parent=SEQF2397.1|ALJO01000006.1_1;Note=GTGCAACACTGAACCACAATAAAAGCTGTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2397.1|ALJO01000006.1	CCTyper	direct_repeat	160210	160245	36	+	.	ID=SEQF2397.1|ALJO01000006.1_1_REPEAT9;Parent=SEQF2397.1|ALJO01000006.1_1;Note=GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2397.1|ALJO01000006.1	CCTyper	OPERON	153571	164674	11104	+	.	ID=SEQF2397.1|ALJO01000006.1@5;Genome_ID=SEQF2397.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Cas9_1_II,Cas1_4_CAS-I-II-III-IV-V-VI,Cas2_5_CAS-I-II-III-IV-V-VI,Csn2_1_CAS-II-A,AbiEii_0_CAS-III;Positions=167,168,169,170,174;E-values=0.00e+00,2.40e-103,4.40e-49,9.60e-100,4.20e-04;CoverageSeq=0.996,0.931,0.965,0.982,0.397;CoverageHMM=0.999,0.996,0.983,0.995,0.306;Strand_Interference=1;Strand_Adaptation=1
SEQF2397.1|ALJO01000005.1	CCTyper	OPERON	23740	24782	1043	+	.	ID=SEQF2397.1|ALJO01000005.1@1;Genome_ID=SEQF2397.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-D;Complete_Interference=100%;Complete_Adaptation=0%;Best_type=II-D;Best_score=4.0;Genes=Csx19_13_CAS-III-D,Cas9_0_II-D;Positions=19,20;E-values=9.90e-03,3.40e-12;CoverageSeq=0.414,0.645;CoverageHMM=0.426,0.137;Strand_Interference=1;Strand_Adaptation=NA
SEQF2397.1|ALJO01000006.1	CCTyper	CDS	163973	164674	234	+	.	ID=SEQF2397.1|ALJO01000006.1_174_cas;Genome_ID=SEQF2397.1;Feature_type=CDS;Product=Cas Prediction : AbiEii_0_CAS-III;coding_strand=+;E-value=0.00042;Score=16.7;Coverage_Seq=0.3974358974358974;Coverage_Hmm=0.30633802816901406
SEQF2397.1|ALJO01000006.1	CCTyper	CDS	157731	158597	289	+	.	ID=SEQF2397.1|ALJO01000006.1_168_cas;Genome_ID=SEQF2397.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=2.4e-103;Score=341.9;Coverage_Seq=0.9307958477508651;Coverage_Hmm=0.9963636363636363
SEQF2397.1|ALJO01000006.1	CCTyper	CDS	158594	158938	115	+	.	ID=SEQF2397.1|ALJO01000006.1_169_cas;Genome_ID=SEQF2397.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=4.4e-49;Score=162.4;Coverage_Seq=0.9652173913043478;Coverage_Hmm=0.9827586206896551
SEQF2397.1|ALJO01000005.1	CCTyper	CDS	24174	24782	203	+	.	ID=SEQF2397.1|ALJO01000005.1_20_cas;Genome_ID=SEQF2397.1;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II-D;coding_strand=+;E-value=3.4e-12;Score=42.4;Coverage_Seq=0.645320197044335;Coverage_Hmm=0.13716295427901523
SEQF2397.1|ALJO01000006.1	CCTyper	CDS	153571	157731	1387	+	.	ID=SEQF2397.1|ALJO01000006.1_167_cas;Genome_ID=SEQF2397.1;Feature_type=CDS;Product=Cas Prediction : Cas9_1_II;coding_strand=+;E-value=0.0;Score=1093.5;Coverage_Seq=0.9956741167988464;Coverage_Hmm=0.9991071428571429
SEQF2397.1|ALJO01000006.1	CCTyper	CDS	158928	159590	221	+	.	ID=SEQF2397.1|ALJO01000006.1_170_cas;Genome_ID=SEQF2397.1;Feature_type=CDS;Product=Cas Prediction : Csn2_1_CAS-II-A;coding_strand=+;E-value=9.6e-100;Score=329.5;Coverage_Seq=0.9819004524886877;Coverage_Hmm=0.9954128440366973
SEQF2397.1|ALJO01000005.1	CCTyper	CDS	23740	24174	145	+	.	ID=SEQF2397.1|ALJO01000005.1_19_cas;Genome_ID=SEQF2397.1;Feature_type=CDS;Product=Cas Prediction : Csx19_13_CAS-III-D;coding_strand=+;E-value=0.0099;Score=12.7;Coverage_Seq=0.41379310344827586;Coverage_Hmm=0.4264705882352941