SEQF2406.1|JH815370.1	CCTyper	repeat_region	40627	40821	195	+	.	ID=SEQF2406.1|JH815370.1_1;Genome_ID=SEQF2406.1;Note=Predictor:CCtyper;Start:40627;End:40821;Consensus_Repeat:ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAC;Number_of_Repeats:3;Repeat_Length:36;Average_Spacer_Length:43.5;Repeat_Identity:100.0;Spacer_Identity:45.0;Spacer_Length_Sem:0.5;Trusted:True;Cas_Type_Prediction: III-A;Cas_Subtype_Prediction:III-A;Subtype_Probability:0.992;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815370.1	CCTyper	direct_repeat	40627	40662	36	+	.	ID=SEQF2406.1|JH815370.1_1_REPEAT1;Parent=SEQF2406.1|JH815370.1_1;Note=ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815370.1	CCTyper	binding_site	40663	40706	44	+	.	ID=SEQF2406.1|JH815370.1_1_SPACER1;Parent=SEQF2406.1|JH815370.1_1;Note=CTGAGCCATTTACTCTCAGATCTCCATTTATGGTCATAGGACCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815370.1	CCTyper	direct_repeat	40707	40742	36	+	.	ID=SEQF2406.1|JH815370.1_1_REPEAT2;Parent=SEQF2406.1|JH815370.1_1;Note=ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815370.1	CCTyper	binding_site	40743	40785	43	+	.	ID=SEQF2406.1|JH815370.1_1_SPACER2;Parent=SEQF2406.1|JH815370.1_1;Note=TGAACAATTAAAGGATAATGATAAAAAGGTTATTCAAGAGCTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815370.1	CCTyper	direct_repeat	40786	40821	36	+	.	ID=SEQF2406.1|JH815370.1_1_REPEAT3;Parent=SEQF2406.1|JH815370.1_1;Note=ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815420.1	CCTyper	repeat_region	1375	1863	489	+	.	ID=SEQF2406.1|JH815420.1_2;Genome_ID=SEQF2406.1;Note=Predictor:CCtyper;Start:1375;End:1863;Consensus_Repeat:GTTTCCGTCTCCTTACGGAGTATTATTCATTCTTAT;Number_of_Repeats:7;Repeat_Length:36;Average_Spacer_Length:39.5;Repeat_Identity:86.3;Spacer_Identity:46.7;Spacer_Length_Sem:1.1;Trusted:True;Cas_Type_Prediction: III-A;Cas_Subtype_Prediction:III-A;Subtype_Probability:0.919;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815420.1	CCTyper	direct_repeat	1375	1410	36	+	.	ID=SEQF2406.1|JH815420.1_2_REPEAT1;Parent=SEQF2406.1|JH815420.1_2;Note=TAATCCGTCTCCTTACAGAGTATTATTCATTCTTAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815420.1	CCTyper	binding_site	1411	1454	44	+	.	ID=SEQF2406.1|JH815420.1_2_SPACER1;Parent=SEQF2406.1|JH815420.1_2;Note=GAACTATTCTTCGCAAATCTAATACTTTTCAATTGCAAAGTCAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815420.1	CCTyper	direct_repeat	1455	1490	36	+	.	ID=SEQF2406.1|JH815420.1_2_REPEAT2;Parent=SEQF2406.1|JH815420.1_2;Note=GTTTCCGTCTCCTTACGGAGTATCATTCATTCTTAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815420.1	CCTyper	binding_site	1491	1529	39	+	.	ID=SEQF2406.1|JH815420.1_2_SPACER2;Parent=SEQF2406.1|JH815420.1_2;Note=TCAAGAAGATAAAGAAACTTTAGCAACAGCTTATGCAGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815420.1	CCTyper	direct_repeat	1530	1565	36	+	.	ID=SEQF2406.1|JH815420.1_2_REPEAT3;Parent=SEQF2406.1|JH815420.1_2;Note=GTTTCCGTCTCCTTACGGAGTATTATTCATTCTTAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815420.1	CCTyper	binding_site	1566	1606	41	+	.	ID=SEQF2406.1|JH815420.1_2_SPACER3;Parent=SEQF2406.1|JH815420.1_2;Note=TCAATGAGTACGAAAAACAATGGTGTAGTCAAGGATTTAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815420.1	CCTyper	direct_repeat	1607	1642	36	+	.	ID=SEQF2406.1|JH815420.1_2_REPEAT4;Parent=SEQF2406.1|JH815420.1_2;Note=GTTTCCGTCTCCTTACGGAGTATTATTCATTCTTAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815420.1	CCTyper	binding_site	1643	1680	38	+	.	ID=SEQF2406.1|JH815420.1_2_SPACER4;Parent=SEQF2406.1|JH815420.1_2;Note=AAAAAATAGGGGTGATTATATGGGAGTATTATTAAATG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815420.1	CCTyper	direct_repeat	1681	1716	36	+	.	ID=SEQF2406.1|JH815420.1_2_REPEAT5;Parent=SEQF2406.1|JH815420.1_2;Note=GTTTTCGTCTCCTTACGGAGTATTATTCATTCTTAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815420.1	CCTyper	binding_site	1717	1754	38	+	.	ID=SEQF2406.1|JH815420.1_2_SPACER5;Parent=SEQF2406.1|JH815420.1_2;Note=TAAAGAAATAATAATAGATGACAATGCTGTTGTTTATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815420.1	CCTyper	direct_repeat	1755	1790	36	+	.	ID=SEQF2406.1|JH815420.1_2_REPEAT6;Parent=SEQF2406.1|JH815420.1_2;Note=GTTTCCGTCTCCTTACGGAGTATTATTCATTCTTAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815420.1	CCTyper	binding_site	1791	1827	37	+	.	ID=SEQF2406.1|JH815420.1_2_SPACER6;Parent=SEQF2406.1|JH815420.1_2;Note=TAGAAAAAATATTTGGAGTAAACTATAAAGAATATCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815420.1	CCTyper	direct_repeat	1828	1863	36	+	.	ID=SEQF2406.1|JH815420.1_2_REPEAT7;Parent=SEQF2406.1|JH815420.1_2;Note=GTTTCCATCTCCTTATGAAGTTATATTCACTTTTAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	repeat_region	1789	2548	760	+	.	ID=SEQF2406.1|JH815434.1_3;Genome_ID=SEQF2406.1;Note=Predictor:CCtyper;Start:1789;End:2548;Consensus_Repeat:ATTTAAATTCCAATATGATAATACTTTAAGT;Number_of_Repeats:12;Repeat_Length:31;Average_Spacer_Length:35.3;Repeat_Identity:92.3;Spacer_Identity:45.1;Spacer_Length_Sem:0.3;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:V-F1;Subtype_Probability:0.598;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	direct_repeat	1789	1819	31	+	.	ID=SEQF2406.1|JH815434.1_3_REPEAT1;Parent=SEQF2406.1|JH815434.1_3;Note=ATTTTAAACCTAATATGCTAATACTTAAATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	binding_site	1820	1855	36	+	.	ID=SEQF2406.1|JH815434.1_3_SPACER1;Parent=SEQF2406.1|JH815434.1_3;Note=TAATCAAGCTGTTAGAAAATACTTAGGGCTAAATTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	direct_repeat	1856	1886	31	+	.	ID=SEQF2406.1|JH815434.1_3_REPEAT2;Parent=SEQF2406.1|JH815434.1_3;Note=ATTTAAATTCCAATATGATAATACTTAAAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	binding_site	1887	1920	34	+	.	ID=SEQF2406.1|JH815434.1_3_SPACER2;Parent=SEQF2406.1|JH815434.1_3;Note=TTAAGAAACTTAGCATATTTAGATAATAATTGAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	direct_repeat	1921	1951	31	+	.	ID=SEQF2406.1|JH815434.1_3_REPEAT3;Parent=SEQF2406.1|JH815434.1_3;Note=ATTTAAATTCCAATATGATAATACTTTAAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	binding_site	1952	1986	35	+	.	ID=SEQF2406.1|JH815434.1_3_SPACER3;Parent=SEQF2406.1|JH815434.1_3;Note=AGAAAGTCCAAACAAAGTTTTTATCCCTGCACTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	direct_repeat	1987	2017	31	+	.	ID=SEQF2406.1|JH815434.1_3_REPEAT4;Parent=SEQF2406.1|JH815434.1_3;Note=ATTTAAATTCCAATATGATAATACTTTAAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	binding_site	2018	2052	35	+	.	ID=SEQF2406.1|JH815434.1_3_SPACER4;Parent=SEQF2406.1|JH815434.1_3;Note=AAACAAATTATTAACAGTGGAAACACTGAAAAAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	direct_repeat	2053	2083	31	+	.	ID=SEQF2406.1|JH815434.1_3_REPEAT5;Parent=SEQF2406.1|JH815434.1_3;Note=ATTTAAATTCCAATATGATAATACTTTAAGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	binding_site	2084	2117	34	+	.	ID=SEQF2406.1|JH815434.1_3_SPACER5;Parent=SEQF2406.1|JH815434.1_3;Note=ATCCAAATAATCAGATGTATAAATTACTACTAGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	direct_repeat	2118	2148	31	+	.	ID=SEQF2406.1|JH815434.1_3_REPEAT6;Parent=SEQF2406.1|JH815434.1_3;Note=ATTTAAATTCCAATATGATAATACTTTAAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	binding_site	2149	2183	35	+	.	ID=SEQF2406.1|JH815434.1_3_SPACER6;Parent=SEQF2406.1|JH815434.1_3;Note=TATCAAAAAACTGAGTATTTTTTAAGTAATTATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	direct_repeat	2184	2214	31	+	.	ID=SEQF2406.1|JH815434.1_3_REPEAT7;Parent=SEQF2406.1|JH815434.1_3;Note=ATTTAAATTCCAATATGATAATACTTTAAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	binding_site	2215	2250	36	+	.	ID=SEQF2406.1|JH815434.1_3_SPACER7;Parent=SEQF2406.1|JH815434.1_3;Note=CAAAAGATTGTCTGATACCTTTTCATTAGAAAGAGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	direct_repeat	2251	2281	31	+	.	ID=SEQF2406.1|JH815434.1_3_REPEAT8;Parent=SEQF2406.1|JH815434.1_3;Note=ATTTAAATTCCAATATGATAATACTTTAAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	binding_site	2282	2316	35	+	.	ID=SEQF2406.1|JH815434.1_3_SPACER8;Parent=SEQF2406.1|JH815434.1_3;Note=TAGCTAAAATTAGATTAAATTTAATGGTAACAAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	direct_repeat	2317	2347	31	+	.	ID=SEQF2406.1|JH815434.1_3_REPEAT9;Parent=SEQF2406.1|JH815434.1_3;Note=ATTTAAATTCCAATATGATAATACTTTAAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	binding_site	2348	2382	35	+	.	ID=SEQF2406.1|JH815434.1_3_SPACER9;Parent=SEQF2406.1|JH815434.1_3;Note=CTAAAAAACAAAACTACTCTTGTGCAGATTCAAGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	direct_repeat	2383	2413	31	+	.	ID=SEQF2406.1|JH815434.1_3_REPEAT10;Parent=SEQF2406.1|JH815434.1_3;Note=ATTTAAATTCCAATATGATAATACTTTAAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	binding_site	2414	2449	36	+	.	ID=SEQF2406.1|JH815434.1_3_SPACER10;Parent=SEQF2406.1|JH815434.1_3;Note=AAAGTTATACAGTATCAAAGCTGTATGGCGAAAGTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	direct_repeat	2450	2480	31	+	.	ID=SEQF2406.1|JH815434.1_3_REPEAT11;Parent=SEQF2406.1|JH815434.1_3;Note=ATTTAAATTCCAATATGATAATACTTTAAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	binding_site	2481	2517	37	+	.	ID=SEQF2406.1|JH815434.1_3_SPACER11;Parent=SEQF2406.1|JH815434.1_3;Note=GCATCTCAAATTGCCCATTTACTTTTATCTTTTTAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	direct_repeat	2518	2548	31	+	.	ID=SEQF2406.1|JH815434.1_3_REPEAT12;Parent=SEQF2406.1|JH815434.1_3;Note=ATTTAAATTCCAATATGATAATACTTTAAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	repeat_region	3194	4412	1219	+	.	ID=SEQF2406.1|JH815434.1_4;Genome_ID=SEQF2406.1;Note=Predictor:CCtyper;Start:3194;End:4412;Consensus_Repeat:ATTTAAATTCCAATATGATAATACTTTAAG;Number_of_Repeats:19;Repeat_Length:30;Average_Spacer_Length:36.1;Repeat_Identity:100.0;Spacer_Identity:44.3;Spacer_Length_Sem:0.2;Trusted:True;Cas_Type_Prediction: I-B;Cas_Subtype_Prediction:I-B;Subtype_Probability:0.935;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	direct_repeat	3194	3223	30	+	.	ID=SEQF2406.1|JH815434.1_4_REPEAT1;Parent=SEQF2406.1|JH815434.1_4;Note=ATTTAAATTCCAATATGATAATACTTTAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	binding_site	3224	3259	36	+	.	ID=SEQF2406.1|JH815434.1_4_SPACER1;Parent=SEQF2406.1|JH815434.1_4;Note=AAGGGATCTGCATATCATAGGAGCAAGACCAGGAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	direct_repeat	3260	3289	30	+	.	ID=SEQF2406.1|JH815434.1_4_REPEAT2;Parent=SEQF2406.1|JH815434.1_4;Note=ATTTAAATTCCAATATGATAATACTTTAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	binding_site	3290	3324	35	+	.	ID=SEQF2406.1|JH815434.1_4_SPACER2;Parent=SEQF2406.1|JH815434.1_4;Note=CCAATTCTGTTTTTTGCTGATGTGATCTTACCCTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	direct_repeat	3325	3354	30	+	.	ID=SEQF2406.1|JH815434.1_4_REPEAT3;Parent=SEQF2406.1|JH815434.1_4;Note=ATTTAAATTCCAATATGATAATACTTTAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	binding_site	3355	3388	34	+	.	ID=SEQF2406.1|JH815434.1_4_SPACER3;Parent=SEQF2406.1|JH815434.1_4;Note=TAGAGGCTCTACTATAAAAAGCCTCTGCTAAATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	direct_repeat	3389	3418	30	+	.	ID=SEQF2406.1|JH815434.1_4_REPEAT4;Parent=SEQF2406.1|JH815434.1_4;Note=ATTTAAATTCCAATATGATAATACTTTAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	binding_site	3419	3456	38	+	.	ID=SEQF2406.1|JH815434.1_4_SPACER4;Parent=SEQF2406.1|JH815434.1_4;Note=TTTAAAGCTTCTTGCTCTGTTATATTCCATTCTGAGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	direct_repeat	3457	3486	30	+	.	ID=SEQF2406.1|JH815434.1_4_REPEAT5;Parent=SEQF2406.1|JH815434.1_4;Note=ATTTAAATTCCAATATGATAATACTTTAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	binding_site	3487	3522	36	+	.	ID=SEQF2406.1|JH815434.1_4_SPACER5;Parent=SEQF2406.1|JH815434.1_4;Note=TATTCCCTTGTTTTTGTAAGAAAGTTTTTACTTCTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	direct_repeat	3523	3552	30	+	.	ID=SEQF2406.1|JH815434.1_4_REPEAT6;Parent=SEQF2406.1|JH815434.1_4;Note=ATTTAAATTCCAATATGATAATACTTTAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	binding_site	3553	3587	35	+	.	ID=SEQF2406.1|JH815434.1_4_SPACER6;Parent=SEQF2406.1|JH815434.1_4;Note=TAATTGGTTATAGAAATGATCCAAAACAATCAATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	direct_repeat	3588	3617	30	+	.	ID=SEQF2406.1|JH815434.1_4_REPEAT7;Parent=SEQF2406.1|JH815434.1_4;Note=ATTTAAATTCCAATATGATAATACTTTAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	binding_site	3618	3652	35	+	.	ID=SEQF2406.1|JH815434.1_4_SPACER7;Parent=SEQF2406.1|JH815434.1_4;Note=TAATTGGTTATAGAAATGATCCAAAACAATCAATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	direct_repeat	3653	3682	30	+	.	ID=SEQF2406.1|JH815434.1_4_REPEAT8;Parent=SEQF2406.1|JH815434.1_4;Note=ATTTAAATTCCAATATGATAATACTTTAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	binding_site	3683	3719	37	+	.	ID=SEQF2406.1|JH815434.1_4_SPACER8;Parent=SEQF2406.1|JH815434.1_4;Note=ATAAATCTAGATGGATTTCTGCTGATGAAGTTTTACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	direct_repeat	3720	3749	30	+	.	ID=SEQF2406.1|JH815434.1_4_REPEAT9;Parent=SEQF2406.1|JH815434.1_4;Note=ATTTAAATTCCAATATGATAATACTTTAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	binding_site	3750	3786	37	+	.	ID=SEQF2406.1|JH815434.1_4_SPACER9;Parent=SEQF2406.1|JH815434.1_4;Note=TAAAAAGAGACTGTCCATATGTAACTATAGATAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	direct_repeat	3787	3816	30	+	.	ID=SEQF2406.1|JH815434.1_4_REPEAT10;Parent=SEQF2406.1|JH815434.1_4;Note=ATTTAAATTCCAATATGATAATACTTTAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	binding_site	3817	3851	35	+	.	ID=SEQF2406.1|JH815434.1_4_SPACER10;Parent=SEQF2406.1|JH815434.1_4;Note=GTTTTTTAATTTAGTTAATGTTTCAACACAGCCAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	direct_repeat	3852	3881	30	+	.	ID=SEQF2406.1|JH815434.1_4_REPEAT11;Parent=SEQF2406.1|JH815434.1_4;Note=ATTTAAATTCCAATATGATAATACTTTAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	binding_site	3882	3917	36	+	.	ID=SEQF2406.1|JH815434.1_4_SPACER11;Parent=SEQF2406.1|JH815434.1_4;Note=AATAACTCTTTGTACTCCTCTTTAACTTTTCCTAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	direct_repeat	3918	3947	30	+	.	ID=SEQF2406.1|JH815434.1_4_REPEAT12;Parent=SEQF2406.1|JH815434.1_4;Note=ATTTAAATTCCAATATGATAATACTTTAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	binding_site	3948	3985	38	+	.	ID=SEQF2406.1|JH815434.1_4_SPACER12;Parent=SEQF2406.1|JH815434.1_4;Note=AAAAACTATATAAATGAACTAAAAAGAAATTATATGAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	direct_repeat	3986	4015	30	+	.	ID=SEQF2406.1|JH815434.1_4_REPEAT13;Parent=SEQF2406.1|JH815434.1_4;Note=ATTTAAATTCCAATATGATAATACTTTAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	binding_site	4016	4051	36	+	.	ID=SEQF2406.1|JH815434.1_4_SPACER13;Parent=SEQF2406.1|JH815434.1_4;Note=GGTAATAACAAAAGTTCAAAATAATCCTAAAATGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	direct_repeat	4052	4081	30	+	.	ID=SEQF2406.1|JH815434.1_4_REPEAT14;Parent=SEQF2406.1|JH815434.1_4;Note=ATTTAAATTCCAATATGATAATACTTTAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	binding_site	4082	4118	37	+	.	ID=SEQF2406.1|JH815434.1_4_SPACER14;Parent=SEQF2406.1|JH815434.1_4;Note=TATGCTTTCTCACAATTAGAGTTAGAAAAACTTAGAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	direct_repeat	4119	4148	30	+	.	ID=SEQF2406.1|JH815434.1_4_REPEAT15;Parent=SEQF2406.1|JH815434.1_4;Note=ATTTAAATTCCAATATGATAATACTTTAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	binding_site	4149	4184	36	+	.	ID=SEQF2406.1|JH815434.1_4_SPACER15;Parent=SEQF2406.1|JH815434.1_4;Note=GGCACTTGCAATAGGTGAAATTTCAGGTACTATGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	direct_repeat	4185	4214	30	+	.	ID=SEQF2406.1|JH815434.1_4_REPEAT16;Parent=SEQF2406.1|JH815434.1_4;Note=ATTTAAATTCCAATATGATAATACTTTAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	binding_site	4215	4250	36	+	.	ID=SEQF2406.1|JH815434.1_4_SPACER16;Parent=SEQF2406.1|JH815434.1_4;Note=CTCAAGTGAACGGTTAATAGCTCTTGAAATGCAACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	direct_repeat	4251	4280	30	+	.	ID=SEQF2406.1|JH815434.1_4_REPEAT17;Parent=SEQF2406.1|JH815434.1_4;Note=ATTTAAATTCCAATATGATAATACTTTAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	binding_site	4281	4316	36	+	.	ID=SEQF2406.1|JH815434.1_4_SPACER17;Parent=SEQF2406.1|JH815434.1_4;Note=TATTTTCTCATTTTGAGTAAACAATCTTGCTGCAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	direct_repeat	4317	4346	30	+	.	ID=SEQF2406.1|JH815434.1_4_REPEAT18;Parent=SEQF2406.1|JH815434.1_4;Note=ATTTAAATTCCAATATGATAATACTTTAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	binding_site	4347	4382	36	+	.	ID=SEQF2406.1|JH815434.1_4_SPACER18;Parent=SEQF2406.1|JH815434.1_4;Note=TGTGCTAAGTTGGTATATGAATTATTTATTATCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815434.1	CCTyper	direct_repeat	4383	4412	30	+	.	ID=SEQF2406.1|JH815434.1_4_REPEAT19;Parent=SEQF2406.1|JH815434.1_4;Note=ATTTAAATTCCAATATGATAATACTTTAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815448.1	CCTyper	repeat_region	7	819	813	+	.	ID=SEQF2406.1|JH815448.1_5;Genome_ID=SEQF2406.1;Note=Predictor:CCtyper;Start:7;End:819;Consensus_Repeat:ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAC;Number_of_Repeats:11;Repeat_Length:36;Average_Spacer_Length:41.7;Repeat_Identity:100.0;Spacer_Identity:43.7;Spacer_Length_Sem:0.9;Trusted:True;Cas_Type_Prediction: III-A;Cas_Subtype_Prediction:III-A;Subtype_Probability:0.992;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815448.1	CCTyper	direct_repeat	7	42	36	+	.	ID=SEQF2406.1|JH815448.1_5_REPEAT1;Parent=SEQF2406.1|JH815448.1_5;Note=ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815448.1	CCTyper	binding_site	43	86	44	+	.	ID=SEQF2406.1|JH815448.1_5_SPACER1;Parent=SEQF2406.1|JH815448.1_5;Note=CGGAAAGCTAGTAAAAAGATGATAAGTAATTCACTTCCTGTCAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815448.1	CCTyper	direct_repeat	87	122	36	+	.	ID=SEQF2406.1|JH815448.1_5_REPEAT2;Parent=SEQF2406.1|JH815448.1_5;Note=ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815448.1	CCTyper	binding_site	123	166	44	+	.	ID=SEQF2406.1|JH815448.1_5_SPACER2;Parent=SEQF2406.1|JH815448.1_5;Note=TTACTGTAAAAACAGCATATGATTTAATGGAGTATGCAGAAATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815448.1	CCTyper	direct_repeat	167	202	36	+	.	ID=SEQF2406.1|JH815448.1_5_REPEAT3;Parent=SEQF2406.1|JH815448.1_5;Note=ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815448.1	CCTyper	binding_site	203	244	42	+	.	ID=SEQF2406.1|JH815448.1_5_SPACER3;Parent=SEQF2406.1|JH815448.1_5;Note=TTGGAACTTTGTACCTTTTGTAAACTTTTCTGGTATTCTTAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815448.1	CCTyper	direct_repeat	245	280	36	+	.	ID=SEQF2406.1|JH815448.1_5_REPEAT4;Parent=SEQF2406.1|JH815448.1_5;Note=ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815448.1	CCTyper	binding_site	281	319	39	+	.	ID=SEQF2406.1|JH815448.1_5_SPACER4;Parent=SEQF2406.1|JH815448.1_5;Note=AGTTGGGGGATGAGGTAGGTTTAGGGGTGAAAAGCCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815448.1	CCTyper	direct_repeat	320	355	36	+	.	ID=SEQF2406.1|JH815448.1_5_REPEAT5;Parent=SEQF2406.1|JH815448.1_5;Note=ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815448.1	CCTyper	binding_site	356	392	37	+	.	ID=SEQF2406.1|JH815448.1_5_SPACER5;Parent=SEQF2406.1|JH815448.1_5;Note=ATTAATATCATCTATCCATTCTTTTCTTTTCTTTAGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815448.1	CCTyper	direct_repeat	393	428	36	+	.	ID=SEQF2406.1|JH815448.1_5_REPEAT6;Parent=SEQF2406.1|JH815448.1_5;Note=ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815448.1	CCTyper	binding_site	429	471	43	+	.	ID=SEQF2406.1|JH815448.1_5_SPACER6;Parent=SEQF2406.1|JH815448.1_5;Note=TTTACCACACCACATAGATTCATATTCTAGGACTTCTGGTAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815448.1	CCTyper	direct_repeat	472	507	36	+	.	ID=SEQF2406.1|JH815448.1_5_REPEAT7;Parent=SEQF2406.1|JH815448.1_5;Note=ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815448.1	CCTyper	binding_site	508	551	44	+	.	ID=SEQF2406.1|JH815448.1_5_SPACER7;Parent=SEQF2406.1|JH815448.1_5;Note=GAGTAACTCACCTTGACATTTACAATGATACTACATTTTTTTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815448.1	CCTyper	direct_repeat	552	587	36	+	.	ID=SEQF2406.1|JH815448.1_5_REPEAT8;Parent=SEQF2406.1|JH815448.1_5;Note=ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815448.1	CCTyper	binding_site	588	631	44	+	.	ID=SEQF2406.1|JH815448.1_5_SPACER8;Parent=SEQF2406.1|JH815448.1_5;Note=TAGCGAAGGTATTTACAAAGCATTATTTAGTTATAATACATTAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815448.1	CCTyper	direct_repeat	632	667	36	+	.	ID=SEQF2406.1|JH815448.1_5_REPEAT9;Parent=SEQF2406.1|JH815448.1_5;Note=ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815448.1	CCTyper	binding_site	668	704	37	+	.	ID=SEQF2406.1|JH815448.1_5_SPACER9;Parent=SEQF2406.1|JH815448.1_5;Note=TTTTTTGTTCTATTTAAGAACAAATTACGGTGTTTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815448.1	CCTyper	direct_repeat	705	740	36	+	.	ID=SEQF2406.1|JH815448.1_5_REPEAT10;Parent=SEQF2406.1|JH815448.1_5;Note=ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815448.1	CCTyper	binding_site	741	783	43	+	.	ID=SEQF2406.1|JH815448.1_5_SPACER10;Parent=SEQF2406.1|JH815448.1_5;Note=TAAATGTATACAACGTTGTATAACTCTCATAGTCAAGATTATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815448.1	CCTyper	direct_repeat	784	819	36	+	.	ID=SEQF2406.1|JH815448.1_5_REPEAT11;Parent=SEQF2406.1|JH815448.1_5;Note=ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2406.1|JH815370.1	CCTyper	OPERON	31876	40378	8503	+	.	ID=SEQF2406.1|JH815370.1@1;Genome_ID=SEQF2406.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type III-A;Complete_Interference=100%;Complete_Adaptation=NA;Best_type=III-A;Best_score=17.0;Genes=Cas10_1_CAS-III,Csm2gr11_7_CAS-III-A,Csm3gr7_1_CAS-III-A-III-D,Csm4gr5_0_CAS-III-A,Csm5gr7_1_CAS-III-A-III-D,Cas6_6_IVD,Csm6_7_CAS-III,Cas1_0_CAS-I-II-III-IV-V-VI,Cas2_2_CAS-I-II-III-IV-V-VI;Positions=34,35,36,37,38,39,40,42,43;E-values=9.00e-126,1.50e-18,3.10e-69,5.40e-43,6.50e-17,9.50e-18,3.10e-26,1.80e-98,5.50e-20;CoverageSeq=0.753,0.854,0.856,0.967,0.869,0.851,0.78,0.952,0.673;CoverageHMM=0.602,0.891,0.972,0.99,0.894,0.811,0.756,0.994,0.975;Strand_Interference=1;Strand_Adaptation=NA
SEQF2406.1|JH815424.1	CCTyper	OPERON	54531	59751	5221	+	.	ID=SEQF2406.1|JH815424.1@2;Genome_ID=SEQF2406.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-B;Complete_Interference=100%;Complete_Adaptation=0%;Best_type=I-B;Best_score=14.0;Genes=Cas6_13_CAS-I-II-III-IV-V-VI,Cas8b2_7_CAS-I-B,Cas7_0_CAS-I,Cas5_8_CAS-I-B,Cas3HD_0_CAS-I;Positions=47,48,49,50,51;E-values=1.50e-24,3.00e-248,3.20e-60,1.50e-70,4.00e-23;CoverageSeq=0.701,0.944,0.736,0.611,0.603;CoverageHMM=0.974,1.0,0.991,1.0,0.975;Strand_Interference=1;Strand_Adaptation=NA
SEQF2406.1|JH815370.1	CCTyper	CDS	31876	33645	590	+	.	ID=SEQF2406.1|JH815370.1_34_cas;Genome_ID=SEQF2406.1;Feature_type=CDS;Product=Cas Prediction : Cas10_1_CAS-III;coding_strand=+;E-value=9e-126;Score=418.2;Coverage_Seq=0.752542372881356;Coverage_Hmm=0.6024464831804281
SEQF2406.1|JH815370.1	CCTyper	CDS	39037	40044	336	+	.	ID=SEQF2406.1|JH815370.1_42_cas;Genome_ID=SEQF2406.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.8e-98;Score=326.8;Coverage_Seq=0.9523809523809523;Coverage_Hmm=0.9936908517350158
SEQF2406.1|JH815370.1	CCTyper	CDS	40049	40378	110	+	.	ID=SEQF2406.1|JH815370.1_43_cas;Genome_ID=SEQF2406.1;Feature_type=CDS;Product=Cas Prediction : Cas2_2_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=5.5e-20;Score=68.6;Coverage_Seq=0.6727272727272727;Coverage_Hmm=0.9746835443037974
SEQF2406.1|JH815424.1	CCTyper	CDS	58816	59751	312	+	.	ID=SEQF2406.1|JH815424.1_51_cas;Genome_ID=SEQF2406.1;Feature_type=CDS;Product=Cas Prediction : Cas3HD_0_CAS-I;coding_strand=+;E-value=4.0000000000000004e-23;Score=79.5;Coverage_Seq=0.6025641025641025;Coverage_Hmm=0.9753694581280788
SEQF2406.1|JH815424.1	CCTyper	CDS	57725	58804	360	+	.	ID=SEQF2406.1|JH815424.1_50_cas;Genome_ID=SEQF2406.1;Feature_type=CDS;Product=Cas Prediction : Cas5_8_CAS-I-B;coding_strand=+;E-value=1.5e-70;Score=234.5;Coverage_Seq=0.6111111111111112;Coverage_Hmm=1.0
SEQF2406.1|JH815424.1	CCTyper	CDS	54531	55283	251	+	.	ID=SEQF2406.1|JH815424.1_47_cas;Genome_ID=SEQF2406.1;Feature_type=CDS;Product=Cas Prediction : Cas6_13_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.4999999999999998e-24;Score=84.3;Coverage_Seq=0.701195219123506;Coverage_Hmm=0.9735099337748344
SEQF2406.1|JH815370.1	CCTyper	CDS	36918	37640	241	+	.	ID=SEQF2406.1|JH815370.1_39_cas;Genome_ID=SEQF2406.1;Feature_type=CDS;Product=Cas Prediction : Cas6_6_IVD;coding_strand=+;E-value=9.5e-18;Score=61.8;Coverage_Seq=0.8506224066390041;Coverage_Hmm=0.8108108108108109
SEQF2406.1|JH815424.1	CCTyper	CDS	56830	57714	295	+	.	ID=SEQF2406.1|JH815424.1_49_cas;Genome_ID=SEQF2406.1;Feature_type=CDS;Product=Cas Prediction : Cas7_0_CAS-I;coding_strand=+;E-value=3.2e-60;Score=200.5;Coverage_Seq=0.735593220338983;Coverage_Hmm=0.991304347826087
SEQF2406.1|JH815424.1	CCTyper	CDS	55273	56817	515	+	.	ID=SEQF2406.1|JH815424.1_48_cas;Genome_ID=SEQF2406.1;Feature_type=CDS;Product=Cas Prediction : Cas8b2_7_CAS-I-B;coding_strand=+;E-value=2.9999999999999997e-248;Score=821.9;Coverage_Seq=0.9436893203883495;Coverage_Hmm=1.0
SEQF2406.1|JH815370.1	CCTyper	CDS	33649	34017	123	+	.	ID=SEQF2406.1|JH815370.1_35_cas;Genome_ID=SEQF2406.1;Feature_type=CDS;Product=Cas Prediction : Csm2gr11_7_CAS-III-A;coding_strand=+;E-value=1.5e-18;Score=65.0;Coverage_Seq=0.8536585365853658;Coverage_Hmm=0.8909090909090909
SEQF2406.1|JH815370.1	CCTyper	CDS	34054	34761	236	+	.	ID=SEQF2406.1|JH815370.1_36_cas;Genome_ID=SEQF2406.1;Feature_type=CDS;Product=Cas Prediction : Csm3gr7_1_CAS-III-A-III-D;coding_strand=+;E-value=3.1e-69;Score=230.3;Coverage_Seq=0.8559322033898306;Coverage_Hmm=0.9720930232558139
SEQF2406.1|JH815370.1	CCTyper	CDS	34761	35768	336	+	.	ID=SEQF2406.1|JH815370.1_37_cas;Genome_ID=SEQF2406.1;Feature_type=CDS;Product=Cas Prediction : Csm4gr5_0_CAS-III-A;coding_strand=+;E-value=5.4e-43;Score=144.6;Coverage_Seq=0.9672619047619048;Coverage_Hmm=0.9900332225913622
SEQF2406.1|JH815370.1	CCTyper	CDS	35765	36934	390	+	.	ID=SEQF2406.1|JH815370.1_38_cas;Genome_ID=SEQF2406.1;Feature_type=CDS;Product=Cas Prediction : Csm5gr7_1_CAS-III-A-III-D;coding_strand=+;E-value=6.5e-17;Score=59.5;Coverage_Seq=0.8692307692307693;Coverage_Hmm=0.8943089430894309
SEQF2406.1|JH815370.1	CCTyper	CDS	37633	38763	377	+	.	ID=SEQF2406.1|JH815370.1_40_cas;Genome_ID=SEQF2406.1;Feature_type=CDS;Product=Cas Prediction : Csm6_7_CAS-III;coding_strand=+;E-value=3.1e-26;Score=89.3;Coverage_Seq=0.7798408488063661;Coverage_Hmm=0.7560321715817694