SEQF2421.1|JH932288.1	CCTyper	repeat_region	290273	290545	273	+	.	ID=SEQF2421.1|JH932288.1_1;Genome_ID=SEQF2421.1;Note=Predictor:CCtyper;Start:290273;End:290545;Consensus_Repeat:GTATTCTCCACACATGTGGAGGTGATCC;Number_of_Repeats:5;Repeat_Length:28;Average_Spacer_Length:33.2;Repeat_Identity:82.3;Spacer_Identity:46.2;Spacer_Length_Sem:0.2;Trusted:True;Cas_Type_Prediction: I-E;Cas_Subtype_Prediction:I-E;Subtype_Probability:0.794;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2421.1|JH932288.1	CCTyper	direct_repeat	290273	290300	28	+	.	ID=SEQF2421.1|JH932288.1_1_REPEAT1;Parent=SEQF2421.1|JH932288.1_1;Note=GTATTCTCCACGAGTGTGGAGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2421.1|JH932288.1	CCTyper	binding_site	290301	290333	33	+	.	ID=SEQF2421.1|JH932288.1_1_SPACER1;Parent=SEQF2421.1|JH932288.1_1;Note=TATCATCTTGAAGGGCACGGGAGACAAGGCAGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2421.1|JH932288.1	CCTyper	direct_repeat	290334	290361	28	+	.	ID=SEQF2421.1|JH932288.1_1_REPEAT2;Parent=SEQF2421.1|JH932288.1_1;Note=GTATTCTCCACACATGTGGAGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2421.1|JH932288.1	CCTyper	binding_site	290362	290395	34	+	.	ID=SEQF2421.1|JH932288.1_1_SPACER2;Parent=SEQF2421.1|JH932288.1_1;Note=TACTGTTAACGGTGATGACTGGTATCCAGTTAGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2421.1|JH932288.1	CCTyper	direct_repeat	290396	290423	28	+	.	ID=SEQF2421.1|JH932288.1_1_REPEAT3;Parent=SEQF2421.1|JH932288.1_1;Note=GTATTCTCCACGTGTGTGGAGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2421.1|JH932288.1	CCTyper	binding_site	290424	290456	33	+	.	ID=SEQF2421.1|JH932288.1_1_SPACER3;Parent=SEQF2421.1|JH932288.1_1;Note=TACTTTGAGCTGTGTCAACGCCACAGCCGTTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2421.1|JH932288.1	CCTyper	direct_repeat	290457	290484	28	+	.	ID=SEQF2421.1|JH932288.1_1_REPEAT4;Parent=SEQF2421.1|JH932288.1_1;Note=GTATTCTCCACACATGTGGAGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2421.1|JH932288.1	CCTyper	binding_site	290485	290517	33	+	.	ID=SEQF2421.1|JH932288.1_1_SPACER4;Parent=SEQF2421.1|JH932288.1_1;Note=AAGTCGTTACATCAGCCAAAAGATGAGGCTTAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2421.1|JH932288.1	CCTyper	direct_repeat	290518	290545	28	+	.	ID=SEQF2421.1|JH932288.1_1_REPEAT5;Parent=SEQF2421.1|JH932288.1_1;Note=GTATTCTCCACACATGTGGAGGCTAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2421.1|JH932288.1	CCTyper	repeat_region	304557	304856	300	+	.	ID=SEQF2421.1|JH932288.1_2;Genome_ID=SEQF2421.1;Note=Predictor:CCtyper;Start:304557;End:304856;Consensus_Repeat:GTTTTAGATGATTGTTAGATCAATGAGGTTTAGATC;Number_of_Repeats:5;Repeat_Length:36;Average_Spacer_Length:30.0;Repeat_Identity:97.8;Spacer_Identity:39.6;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.993;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2421.1|JH932288.1	CCTyper	direct_repeat	304557	304592	36	+	.	ID=SEQF2421.1|JH932288.1_2_REPEAT1;Parent=SEQF2421.1|JH932288.1_2;Note=GTTTTAGATGATTGTTAGATCAATGAGGTTTAGATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2421.1|JH932288.1	CCTyper	binding_site	304593	304622	30	+	.	ID=SEQF2421.1|JH932288.1_2_SPACER1;Parent=SEQF2421.1|JH932288.1_2;Note=AGTAGTCTCCAATTCAAAAGGTGCTTACGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2421.1|JH932288.1	CCTyper	direct_repeat	304623	304658	36	+	.	ID=SEQF2421.1|JH932288.1_2_REPEAT2;Parent=SEQF2421.1|JH932288.1_2;Note=GTTTTAGATGATTGTTAGATCAATGAGGTTTAGATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2421.1|JH932288.1	CCTyper	binding_site	304659	304688	30	+	.	ID=SEQF2421.1|JH932288.1_2_SPACER2;Parent=SEQF2421.1|JH932288.1_2;Note=AAGCACTTGAATCTTGTCCCTGCTAGGAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2421.1|JH932288.1	CCTyper	direct_repeat	304689	304724	36	+	.	ID=SEQF2421.1|JH932288.1_2_REPEAT3;Parent=SEQF2421.1|JH932288.1_2;Note=GTTTTAGATGATTGTTAGATCAATGAGGTTTAGATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2421.1|JH932288.1	CCTyper	binding_site	304725	304754	30	+	.	ID=SEQF2421.1|JH932288.1_2_SPACER3;Parent=SEQF2421.1|JH932288.1_2;Note=TCGAATTTAGAAAAATCAACATTAACGCGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2421.1|JH932288.1	CCTyper	direct_repeat	304755	304790	36	+	.	ID=SEQF2421.1|JH932288.1_2_REPEAT4;Parent=SEQF2421.1|JH932288.1_2;Note=GTTTTAGATGATTGTTAGATCAATGAGGTTTAGATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2421.1|JH932288.1	CCTyper	binding_site	304791	304820	30	+	.	ID=SEQF2421.1|JH932288.1_2_SPACER4;Parent=SEQF2421.1|JH932288.1_2;Note=CCGTGAAAACGGCGTTTACATGCGTAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2421.1|JH932288.1	CCTyper	direct_repeat	304821	304856	36	+	.	ID=SEQF2421.1|JH932288.1_2_REPEAT5;Parent=SEQF2421.1|JH932288.1_2;Note=GTTTTAGATGGTTGTTAGATCAATGAGGTTTAGATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2421.1|JH932288.1	CCTyper	OPERON	294142	304524	10383	+	.	ID=SEQF2421.1|JH932288.1@5;Genome_ID=SEQF2421.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Cas9_0_II,Cas9_0_II,Cas1_4_CAS-I-II-III-IV-V-VI,Cas2_9_CAS-I-II-III-IV-V-VI,Csn2_3_CAS-II-A,Csn2_3_CAS-II-A;Positions=305,307,309,310,311,313;E-values=6.50e-109,1.00e-53,6.80e-89,1.30e-54,5.10e-34,1.20e-27;CoverageSeq=0.962,0.976,0.888,0.981,0.952,0.952;CoverageHMM=0.708,0.249,0.996,1.0,0.63,0.361;Strand_Interference=1;Strand_Adaptation=1
SEQF2421.1|JH932288.1	CCTyper	CDS	300499	301407	303	+	.	ID=SEQF2421.1|JH932288.1_309_cas;Genome_ID=SEQF2421.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=6.8e-89;Score=294.8;Coverage_Seq=0.8877887788778878;Coverage_Hmm=0.9963636363636363
SEQF2421.1|JH932288.1	CCTyper	CDS	301382	301690	103	+	.	ID=SEQF2421.1|JH932288.1_310_cas;Genome_ID=SEQF2421.1;Feature_type=CDS;Product=Cas Prediction : Cas2_9_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.3e-54;Score=179.8;Coverage_Seq=0.9805825242718447;Coverage_Hmm=1.0
SEQF2421.1|JH932288.1	CCTyper	CDS	294142	296715	858	+	.	ID=SEQF2421.1|JH932288.1_305_cas;Genome_ID=SEQF2421.1;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=+;E-value=6.5e-109;Score=362.6;Coverage_Seq=0.9615384615384616;Coverage_Hmm=0.708433734939759
SEQF2421.1|JH932288.1	CCTyper	CDS	298678	299298	207	+	.	ID=SEQF2421.1|JH932288.1_307_cas;Genome_ID=SEQF2421.1;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=+;E-value=1e-53;Score=180.0;Coverage_Seq=0.9758454106280193;Coverage_Hmm=0.2493975903614458
SEQF2421.1|JH932288.1	CCTyper	CDS	301687	302121	145	+	.	ID=SEQF2421.1|JH932288.1_311_cas;Genome_ID=SEQF2421.1;Feature_type=CDS;Product=Cas Prediction : Csn2_3_CAS-II-A;coding_strand=+;E-value=5.1e-34;Score=115.0;Coverage_Seq=0.9517241379310345;Coverage_Hmm=0.6301369863013698
SEQF2421.1|JH932288.1	CCTyper	CDS	304276	304524	83	+	.	ID=SEQF2421.1|JH932288.1_313_cas;Genome_ID=SEQF2421.1;Feature_type=CDS;Product=Cas Prediction : Csn2_3_CAS-II-A;coding_strand=+;E-value=1.2e-27;Score=94.2;Coverage_Seq=0.9518072289156626;Coverage_Hmm=0.3607305936073059