SEQF2486.1|APBO01000208.1	CCTyper	repeat_region	12	500	489	+	.	ID=SEQF2486.1|APBO01000208.1_1;Genome_ID=SEQF2486.1;Note=Predictor:CCtyper;Start:12;End:500;Consensus_Repeat:GTTTGATATGACCTGACTTGATAAGGGATTACGAC;Number_of_Repeats:7;Repeat_Length:35;Average_Spacer_Length:40.7;Repeat_Identity:100.0;Spacer_Identity:43.0;Spacer_Length_Sem:0.8;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:III-C;Subtype_Probability:0.309;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2486.1|APBO01000208.1	CCTyper	direct_repeat	12	46	35	+	.	ID=SEQF2486.1|APBO01000208.1_1_REPEAT1;Parent=SEQF2486.1|APBO01000208.1_1;Note=GTTTGATATGACCTGACTTGATAAGGGATTACGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2486.1|APBO01000208.1	CCTyper	binding_site	47	88	42	+	.	ID=SEQF2486.1|APBO01000208.1_1_SPACER1;Parent=SEQF2486.1|APBO01000208.1_1;Note=GCCCCAATACCTGGGGCTCATTGGGTGCCCCAATCCTTGGGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2486.1|APBO01000208.1	CCTyper	direct_repeat	89	123	35	+	.	ID=SEQF2486.1|APBO01000208.1_1_REPEAT2;Parent=SEQF2486.1|APBO01000208.1_1;Note=GTTTGATATGACCTGACTTGATAAGGGATTACGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2486.1|APBO01000208.1	CCTyper	binding_site	124	162	39	+	.	ID=SEQF2486.1|APBO01000208.1_1_SPACER2;Parent=SEQF2486.1|APBO01000208.1_1;Note=GGCCATTAACATCACATATTTCTCTGGGCAGTAAGCCCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2486.1|APBO01000208.1	CCTyper	direct_repeat	163	197	35	+	.	ID=SEQF2486.1|APBO01000208.1_1_REPEAT3;Parent=SEQF2486.1|APBO01000208.1_1;Note=GTTTGATATGACCTGACTTGATAAGGGATTACGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2486.1|APBO01000208.1	CCTyper	binding_site	198	237	40	+	.	ID=SEQF2486.1|APBO01000208.1_1_SPACER3;Parent=SEQF2486.1|APBO01000208.1_1;Note=CGGCGTCAAAAAATTGGGAATTCCCGTGGTCTTCAACCAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2486.1|APBO01000208.1	CCTyper	direct_repeat	238	272	35	+	.	ID=SEQF2486.1|APBO01000208.1_1_REPEAT4;Parent=SEQF2486.1|APBO01000208.1_1;Note=GTTTGATATGACCTGACTTGATAAGGGATTACGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2486.1|APBO01000208.1	CCTyper	binding_site	273	311	39	+	.	ID=SEQF2486.1|APBO01000208.1_1_SPACER4;Parent=SEQF2486.1|APBO01000208.1_1;Note=CAGCCTTGCCATTAACATCCCGTATCTCTCTGGGCAGCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2486.1|APBO01000208.1	CCTyper	direct_repeat	312	346	35	+	.	ID=SEQF2486.1|APBO01000208.1_1_REPEAT5;Parent=SEQF2486.1|APBO01000208.1_1;Note=GTTTGATATGACCTGACTTGATAAGGGATTACGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2486.1|APBO01000208.1	CCTyper	binding_site	347	390	44	+	.	ID=SEQF2486.1|APBO01000208.1_1_SPACER5;Parent=SEQF2486.1|APBO01000208.1_1;Note=TTGCCAGCGGCGCGACCGCGCTCTTTGGCGAGAAGTACGGCGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2486.1|APBO01000208.1	CCTyper	direct_repeat	391	425	35	+	.	ID=SEQF2486.1|APBO01000208.1_1_REPEAT6;Parent=SEQF2486.1|APBO01000208.1_1;Note=GTTTGATATGACCTGACTTGATAAGGGATTACGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2486.1|APBO01000208.1	CCTyper	binding_site	426	465	40	+	.	ID=SEQF2486.1|APBO01000208.1_1_SPACER6;Parent=SEQF2486.1|APBO01000208.1_1;Note=ACGCGCCGGTGTTGTTCCGCACCACCGCCCGGCTTGCCCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2486.1|APBO01000208.1	CCTyper	direct_repeat	466	500	35	+	.	ID=SEQF2486.1|APBO01000208.1_1_REPEAT7;Parent=SEQF2486.1|APBO01000208.1_1;Note=GTTTGATATGACCTGACTTGATAAGGGATTACGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2486.1|APBO01000003.1	CCTyper	OPERON	2574	7578	5005	+	.	ID=SEQF2486.1|APBO01000003.1@1;Genome_ID=SEQF2486.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-E;Complete_Interference=50%;Complete_Adaptation=0%;Best_type=I-E;Best_score=10.0;Genes=Cas3_1_CAS-I,Cas8e_1_CAS-I-E,Cse2gr11_1_CAS-I-E;Positions=8,9,10;E-values=1.30e-58,6.10e-98,8.70e-15;CoverageSeq=0.417,0.887,0.826;CoverageHMM=0.44,0.983,0.972;Strand_Interference=1;Strand_Adaptation=NA
SEQF2486.1|APBO01000012.1	CCTyper	OPERON	454	12101	11648	-	.	ID=SEQF2486.1|APBO01000012.1@1;Genome_ID=SEQF2486.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type III-A;Complete_Interference=100%;Complete_Adaptation=NA;Best_type=III-A;Best_score=14.0;Genes=Can2_Card1_17_CAS-III,Csx20_0_CAS-I-III,Csm5gr7_0_CAS-III-A-III-D,Csm4gr5_0_CAS-III-A-III-D,Csm3gr7_1_CAS-III-A-III-D,Csm2gr11_7_CAS-III-A,Cas10_1_CAS-III;Positions=1,4,7,8,9,10,11;E-values=2.30e-61,1.60e-42,1.60e-18,3.90e-83,6.10e-62,3.50e-21,2.20e-127;CoverageSeq=0.982,0.976,0.348,0.988,0.914,0.833,0.827;CoverageHMM=0.987,0.954,0.493,0.987,0.94,0.955,0.904;Strand_Interference=-1;Strand_Adaptation=NA
SEQF2486.1|APBO01000026.1	CCTyper	OPERON	92	4801	4710	+	.	ID=SEQF2486.1|APBO01000026.1@1;Genome_ID=SEQF2486.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-C;Complete_Interference=25%;Complete_Adaptation=100%;Best_type=I-C;Best_score=11.0;Genes=Cas8c_3_CAS-I-C,Cas2_2_CAS-I-II-III-IV-V-VI,Cas1_0_IC,Cas4_0_I-II;Positions=1,2,3,4;E-values=2.30e-122,2.00e-25,1.20e-153,1.10e-41;CoverageSeq=0.954,0.856,0.983,0.858;CoverageHMM=0.998,0.987,0.994,0.994;Strand_Interference=1;Strand_Adaptation=-1
SEQF2486.1|APBO01000012.1	CCTyper	CDS	454	1596	381	-	.	ID=SEQF2486.1|APBO01000012.1_1_cas;Genome_ID=SEQF2486.1;Feature_type=CDS;Product=Cas Prediction : Can2_Card1_17_CAS-III;coding_strand=-;E-value=2.3e-61;Score=203.1;Coverage_Seq=0.9816272965879265;Coverage_Hmm=0.9868421052631579
SEQF2486.1|APBO01000012.1	CCTyper	CDS	9744	12101	786	-	.	ID=SEQF2486.1|APBO01000012.1_11_cas;Genome_ID=SEQF2486.1;Feature_type=CDS;Product=Cas Prediction : Cas10_1_CAS-III;coding_strand=-;E-value=2.1999999999999997e-127;Score=421.9;Coverage_Seq=0.8269720101781171;Coverage_Hmm=0.9036697247706422
SEQF2486.1|APBO01000026.1	CCTyper	CDS	3138	4169	344	-	.	ID=SEQF2486.1|APBO01000026.1_3_cas;Genome_ID=SEQF2486.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IC;coding_strand=-;E-value=1.1999999999999998e-153;Score=506.8;Coverage_Seq=0.9825581395348837;Coverage_Hmm=0.9941176470588236
SEQF2486.1|APBO01000026.1	CCTyper	CDS	2844	3134	97	-	.	ID=SEQF2486.1|APBO01000026.1_2_cas;Genome_ID=SEQF2486.1;Feature_type=CDS;Product=Cas Prediction : Cas2_2_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.9999999999999998e-25;Score=84.5;Coverage_Seq=0.8556701030927835;Coverage_Hmm=0.9873417721518988
SEQF2486.1|APBO01000003.1	CCTyper	CDS	2574	5270	899	+	.	ID=SEQF2486.1|APBO01000003.1_8_cas;Genome_ID=SEQF2486.1;Feature_type=CDS;Product=Cas Prediction : Cas3_1_CAS-I;coding_strand=+;E-value=1.3e-58;Score=194.6;Coverage_Seq=0.41713014460511677;Coverage_Hmm=0.44026845637583895
SEQF2486.1|APBO01000026.1	CCTyper	CDS	4166	4801	212	-	.	ID=SEQF2486.1|APBO01000026.1_4_cas;Genome_ID=SEQF2486.1;Feature_type=CDS;Product=Cas Prediction : Cas4_0_I-II;coding_strand=-;E-value=1.1e-41;Score=138.2;Coverage_Seq=0.8584905660377359;Coverage_Hmm=0.9944444444444445
SEQF2486.1|APBO01000026.1	CCTyper	CDS	92	1918	609	+	.	ID=SEQF2486.1|APBO01000026.1_1_cas;Genome_ID=SEQF2486.1;Feature_type=CDS;Product=Cas Prediction : Cas8c_3_CAS-I-C;coding_strand=+;E-value=2.3e-122;Score=405.0;Coverage_Seq=0.9540229885057471;Coverage_Hmm=0.998211091234347
SEQF2486.1|APBO01000003.1	CCTyper	CDS	5513	7099	529	+	.	ID=SEQF2486.1|APBO01000003.1_9_cas;Genome_ID=SEQF2486.1;Feature_type=CDS;Product=Cas Prediction : Cas8e_1_CAS-I-E;coding_strand=+;E-value=6.1e-98;Score=324.5;Coverage_Seq=0.8865784499054821;Coverage_Hmm=0.9831223628691983
SEQF2486.1|APBO01000003.1	CCTyper	CDS	7096	7578	161	+	.	ID=SEQF2486.1|APBO01000003.1_10_cas;Genome_ID=SEQF2486.1;Feature_type=CDS;Product=Cas Prediction : Cse2gr11_1_CAS-I-E;coding_strand=+;E-value=8.7e-15;Score=50.8;Coverage_Seq=0.8260869565217391;Coverage_Hmm=0.972027972027972
SEQF2486.1|APBO01000012.1	CCTyper	CDS	9305	9718	138	-	.	ID=SEQF2486.1|APBO01000012.1_10_cas;Genome_ID=SEQF2486.1;Feature_type=CDS;Product=Cas Prediction : Csm2gr11_7_CAS-III-A;coding_strand=-;E-value=3.5e-21;Score=71.9;Coverage_Seq=0.8333333333333334;Coverage_Hmm=0.9545454545454546
SEQF2486.1|APBO01000012.1	CCTyper	CDS	8557	9252	232	-	.	ID=SEQF2486.1|APBO01000012.1_9_cas;Genome_ID=SEQF2486.1;Feature_type=CDS;Product=Cas Prediction : Csm3gr7_1_CAS-III-A-III-D;coding_strand=-;E-value=6.1e-62;Score=204.8;Coverage_Seq=0.9137931034482759;Coverage_Hmm=0.9395348837209302
SEQF2486.1|APBO01000012.1	CCTyper	CDS	7533	8540	336	-	.	ID=SEQF2486.1|APBO01000012.1_8_cas;Genome_ID=SEQF2486.1;Feature_type=CDS;Product=Cas Prediction : Csm4gr5_0_CAS-III-A-III-D;coding_strand=-;E-value=3.8999999999999996e-83;Score=274.9;Coverage_Seq=0.9880952380952381;Coverage_Hmm=0.9873817034700315
SEQF2486.1|APBO01000012.1	CCTyper	CDS	5811	7532	574	-	.	ID=SEQF2486.1|APBO01000012.1_7_cas;Genome_ID=SEQF2486.1;Feature_type=CDS;Product=Cas Prediction : Csm5gr7_0_CAS-III-A-III-D;coding_strand=-;E-value=1.6e-18;Score=62.7;Coverage_Seq=0.34843205574912894;Coverage_Hmm=0.4931506849315068
SEQF2486.1|APBO01000012.1	CCTyper	CDS	4246	4626	127	-	.	ID=SEQF2486.1|APBO01000012.1_4_cas;Genome_ID=SEQF2486.1;Feature_type=CDS;Product=Cas Prediction : Csx20_0_CAS-I-III;coding_strand=-;E-value=1.6e-42;Score=140.4;Coverage_Seq=0.9763779527559056;Coverage_Hmm=0.9541984732824428