SEQF2558.2|KL402718.1	CCTyper	repeat_region	1260975	1261932	958	+	.	ID=SEQF2558.2|KL402718.1_1;Genome_ID=SEQF2558.2;Note=Predictor:CCtyper;Start:1260975;End:1261932;Consensus_Repeat:GATCTAAGCCTTATTGATCTAACAACCATCTAAAAC;Number_of_Repeats:15;Repeat_Length:36;Average_Spacer_Length:29.9;Repeat_Identity:95.1;Spacer_Identity:47.2;Spacer_Length_Sem:0.1;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.94;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2558.2|KL402718.1	CCTyper	direct_repeat	1260975	1261010	36	+	.	ID=SEQF2558.2|KL402718.1_1_REPEAT1;Parent=SEQF2558.2|KL402718.1_1;Note=ACTAATAACTTTATTGATCTAACAACCATCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2558.2|KL402718.1	CCTyper	binding_site	1261011	1261040	30	+	.	ID=SEQF2558.2|KL402718.1_1_SPACER1;Parent=SEQF2558.2|KL402718.1_1;Note=CGCCTTTTTGTCCGCCTTCTTTGATTAACT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2558.2|KL402718.1	CCTyper	direct_repeat	1261041	1261076	36	+	.	ID=SEQF2558.2|KL402718.1_1_REPEAT2;Parent=SEQF2558.2|KL402718.1_1;Note=GATCTAAACCTTATTGATCTAACAACCATCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2558.2|KL402718.1	CCTyper	binding_site	1261077	1261106	30	+	.	ID=SEQF2558.2|KL402718.1_1_SPACER2;Parent=SEQF2558.2|KL402718.1_1;Note=TGTTGTCGCTGATTTCATTAATTATGCAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2558.2|KL402718.1	CCTyper	direct_repeat	1261107	1261142	36	+	.	ID=SEQF2558.2|KL402718.1_1_REPEAT3;Parent=SEQF2558.2|KL402718.1_1;Note=GATCTAAGCCTTATTGATCTAACAACCATCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2558.2|KL402718.1	CCTyper	binding_site	1261143	1261172	30	+	.	ID=SEQF2558.2|KL402718.1_1_SPACER3;Parent=SEQF2558.2|KL402718.1_1;Note=TATTCAGCATTACAACTCGTACCGACGATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2558.2|KL402718.1	CCTyper	direct_repeat	1261173	1261208	36	+	.	ID=SEQF2558.2|KL402718.1_1_REPEAT4;Parent=SEQF2558.2|KL402718.1_1;Note=GATCTAAGCCTTATTGATCTAACAACCATCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2558.2|KL402718.1	CCTyper	binding_site	1261209	1261238	30	+	.	ID=SEQF2558.2|KL402718.1_1_SPACER4;Parent=SEQF2558.2|KL402718.1_1;Note=ACGGGTATGGATACGATGAATAATGCGATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2558.2|KL402718.1	CCTyper	direct_repeat	1261239	1261274	36	+	.	ID=SEQF2558.2|KL402718.1_1_REPEAT5;Parent=SEQF2558.2|KL402718.1_1;Note=GATCTAAGCCTTATTGATCTAACAACCATCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2558.2|KL402718.1	CCTyper	binding_site	1261275	1261304	30	+	.	ID=SEQF2558.2|KL402718.1_1_SPACER5;Parent=SEQF2558.2|KL402718.1_1;Note=ACGGGTATGGATACGATGAATAATGCGATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2558.2|KL402718.1	CCTyper	direct_repeat	1261305	1261340	36	+	.	ID=SEQF2558.2|KL402718.1_1_REPEAT6;Parent=SEQF2558.2|KL402718.1_1;Note=GATCTAAGCCTTATTGATCTAACAACCATCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2558.2|KL402718.1	CCTyper	binding_site	1261341	1261370	30	+	.	ID=SEQF2558.2|KL402718.1_1_SPACER6;Parent=SEQF2558.2|KL402718.1_1;Note=ACGGGTATGGATACGATGAATAATGCGATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2558.2|KL402718.1	CCTyper	direct_repeat	1261371	1261406	36	+	.	ID=SEQF2558.2|KL402718.1_1_REPEAT7;Parent=SEQF2558.2|KL402718.1_1;Note=GATCTAAGCCTTATTGATCTAACAACCATCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2558.2|KL402718.1	CCTyper	binding_site	1261407	1261435	29	+	.	ID=SEQF2558.2|KL402718.1_1_SPACER7;Parent=SEQF2558.2|KL402718.1_1;Note=CTAATCACCTACTATCTGTTTAATCTTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2558.2|KL402718.1	CCTyper	direct_repeat	1261436	1261471	36	+	.	ID=SEQF2558.2|KL402718.1_1_REPEAT8;Parent=SEQF2558.2|KL402718.1_1;Note=GATCTAAGCCTTATTGATCTAACAACCATCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2558.2|KL402718.1	CCTyper	binding_site	1261472	1261500	29	+	.	ID=SEQF2558.2|KL402718.1_1_SPACER8;Parent=SEQF2558.2|KL402718.1_1;Note=TTGCCAGTACACTTGATGAAAGATTTTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2558.2|KL402718.1	CCTyper	direct_repeat	1261501	1261536	36	+	.	ID=SEQF2558.2|KL402718.1_1_REPEAT9;Parent=SEQF2558.2|KL402718.1_1;Note=GATCTAAGCCTTATTGATCTAACAACCATCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2558.2|KL402718.1	CCTyper	binding_site	1261537	1261566	30	+	.	ID=SEQF2558.2|KL402718.1_1_SPACER9;Parent=SEQF2558.2|KL402718.1_1;Note=CGTGCGATCAACCACTTTATTTAAGAGCTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2558.2|KL402718.1	CCTyper	direct_repeat	1261567	1261602	36	+	.	ID=SEQF2558.2|KL402718.1_1_REPEAT10;Parent=SEQF2558.2|KL402718.1_1;Note=GATCTAAGCCTTATTGATCTAACAACCATCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2558.2|KL402718.1	CCTyper	binding_site	1261603	1261632	30	+	.	ID=SEQF2558.2|KL402718.1_1_SPACER10;Parent=SEQF2558.2|KL402718.1_1;Note=TACGCTTTATTCAAGGGTTAGGTGCTTCGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2558.2|KL402718.1	CCTyper	direct_repeat	1261633	1261668	36	+	.	ID=SEQF2558.2|KL402718.1_1_REPEAT11;Parent=SEQF2558.2|KL402718.1_1;Note=GATCTAAGCCTTATTGATCTAACAACCATCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2558.2|KL402718.1	CCTyper	binding_site	1261669	1261698	30	+	.	ID=SEQF2558.2|KL402718.1_1_SPACER11;Parent=SEQF2558.2|KL402718.1_1;Note=TGTCATCTTCACTCCATATCTTATTCATTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2558.2|KL402718.1	CCTyper	direct_repeat	1261699	1261734	36	+	.	ID=SEQF2558.2|KL402718.1_1_REPEAT12;Parent=SEQF2558.2|KL402718.1_1;Note=GATCTAAGCCTTATTGATCTAACAACCATCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2558.2|KL402718.1	CCTyper	binding_site	1261735	1261764	30	+	.	ID=SEQF2558.2|KL402718.1_1_SPACER12;Parent=SEQF2558.2|KL402718.1_1;Note=TCTTGCCTAATTCCATTTGATATTCAGCTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2558.2|KL402718.1	CCTyper	direct_repeat	1261765	1261800	36	+	.	ID=SEQF2558.2|KL402718.1_1_REPEAT13;Parent=SEQF2558.2|KL402718.1_1;Note=GATCTAAGCCTTATTGATCTAACAACCATCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2558.2|KL402718.1	CCTyper	binding_site	1261801	1261830	30	+	.	ID=SEQF2558.2|KL402718.1_1_SPACER13;Parent=SEQF2558.2|KL402718.1_1;Note=TTAAATCTAAATCAACCGCATCCGCTGGGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2558.2|KL402718.1	CCTyper	direct_repeat	1261831	1261866	36	+	.	ID=SEQF2558.2|KL402718.1_1_REPEAT14;Parent=SEQF2558.2|KL402718.1_1;Note=GATCTAAGCCTTATTGATCTAACAACCATCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2558.2|KL402718.1	CCTyper	binding_site	1261867	1261896	30	+	.	ID=SEQF2558.2|KL402718.1_1_SPACER14;Parent=SEQF2558.2|KL402718.1_1;Note=TAGTTGGAGTAACAACAGGGCTTTCACTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2558.2|KL402718.1	CCTyper	direct_repeat	1261897	1261932	36	+	.	ID=SEQF2558.2|KL402718.1_1_REPEAT15;Parent=SEQF2558.2|KL402718.1_1;Note=GATCTAAGCCTTATTGATCTAACAACCATCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2558.2|KL402718.1	CCTyper	OPERON	1258893	1268187	9295	-	.	ID=SEQF2558.2|KL402718.1@26;Genome_ID=SEQF2558.2;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=htpX_0_CAS-III-B,Csn2_3_CAS-II-A,Cas2_9_CAS-I-II-III-IV-V-VI,Cas1_4_CAS-I-II-III-IV-V-VI,Cas9_0_II;Positions=1273,1276,1277,1278,1279;E-values=5.70e-18,3.60e-65,1.50e-55,6.60e-89,2.20e-169;CoverageSeq=0.892,0.982,0.944,0.884,0.924;CoverageHMM=0.86,0.995,1.0,0.993,0.998;Strand_Interference=-1;Strand_Adaptation=-1
SEQF2558.2|KL402718.1	CCTyper	CDS	1262913	1263821	303	-	.	ID=SEQF2558.2|KL402718.1_1278_cas;Genome_ID=SEQF2558.2;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=6.600000000000001e-89;Score=294.6;Coverage_Seq=0.8844884488448845;Coverage_Hmm=0.9927272727272727
SEQF2558.2|KL402718.1	CCTyper	CDS	1262630	1262950	107	-	.	ID=SEQF2558.2|KL402718.1_1277_cas;Genome_ID=SEQF2558.2;Feature_type=CDS;Product=Cas Prediction : Cas2_9_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.4999999999999999e-55;Score=182.5;Coverage_Seq=0.9439252336448598;Coverage_Hmm=1.0
SEQF2558.2|KL402718.1	CCTyper	CDS	1264027	1268187	1387	-	.	ID=SEQF2558.2|KL402718.1_1279_cas;Genome_ID=SEQF2558.2;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=-;E-value=2.1999999999999998e-169;Score=562.3;Coverage_Seq=0.923576063446287;Coverage_Hmm=0.9975903614457832
SEQF2558.2|KL402718.1	CCTyper	CDS	1261965	1262633	223	-	.	ID=SEQF2558.2|KL402718.1_1276_cas;Genome_ID=SEQF2558.2;Feature_type=CDS;Product=Cas Prediction : Csn2_3_CAS-II-A;coding_strand=-;E-value=3.6000000000000002e-65;Score=216.5;Coverage_Seq=0.9820627802690582;Coverage_Hmm=0.9954337899543378
SEQF2558.2|KL402718.1	CCTyper	CDS	1258893	1259810	306	-	.	ID=SEQF2558.2|KL402718.1_1273_cas;Genome_ID=SEQF2558.2;Feature_type=CDS;Product=Cas Prediction : htpX_0_CAS-III-B;coding_strand=-;E-value=5.7e-18;Score=62.0;Coverage_Seq=0.8921568627450981;Coverage_Hmm=0.8600583090379009