SEQF2563.1|ATWK01000024.1	CCTyper	repeat_region	2	175	174	+	.	ID=SEQF2563.1|ATWK01000024.1_1;Genome_ID=SEQF2563.1;Note=Predictor:CCtyper;Start:2;End:175;Consensus_Repeat:CTCAATGAGTATCTTCCATTAAAA;Number_of_Repeats:3;Repeat_Length:24;Average_Spacer_Length:51;Repeat_Identity:100.0;Spacer_Identity:56.9;Spacer_Length_Sem:3.0;Trusted:False;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:III-B;Subtype_Probability:0.274;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2563.1|ATWK01000024.1	CCTyper	direct_repeat	2	25	24	+	.	ID=SEQF2563.1|ATWK01000024.1_1_REPEAT1;Parent=SEQF2563.1|ATWK01000024.1_1;Note=CTCAATGAGTATCTTCCATTAAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2563.1|ATWK01000024.1	CCTyper	binding_site	26	73	48	+	.	ID=SEQF2563.1|ATWK01000024.1_1_SPACER1;Parent=SEQF2563.1|ATWK01000024.1_1;Note=CAAGGATTAAGATACATCTTGCTGTGTCGGAAACATAGCTACCACGCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2563.1|ATWK01000024.1	CCTyper	direct_repeat	74	97	24	+	.	ID=SEQF2563.1|ATWK01000024.1_1_REPEAT2;Parent=SEQF2563.1|ATWK01000024.1_1;Note=CTCAATGAGTATCTTCCATTAAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2563.1|ATWK01000024.1	CCTyper	binding_site	98	151	54	+	.	ID=SEQF2563.1|ATWK01000024.1_1_SPACER2;Parent=SEQF2563.1|ATWK01000024.1_1;Note=CAAGGATTAAGACTCTGCGCATCGAGCGTCAGATAATTGCCGATACATAATGGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2563.1|ATWK01000024.1	CCTyper	direct_repeat	152	175	24	+	.	ID=SEQF2563.1|ATWK01000024.1_1_REPEAT3;Parent=SEQF2563.1|ATWK01000024.1_1;Note=CTCAATGAGTATCTTCCATTAAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF2563.1|ATWK01000011.1	CCTyper	OPERON	271	13773	13503	-	.	ID=SEQF2563.1|ATWK01000011.1@1;Genome_ID=SEQF2563.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type III-D;Complete_Interference=67%;Complete_Adaptation=NA;Best_type=III-D;Best_score=16.0;Genes=Cas2_4_CAS-I-II-III-IV-V-VI,PrimPol_1_CAS-I-II-III-IV-V-VI,Cas1_8_CAS-I-II-III-IV-V-VI,Csx20_1_CAS-I-III,Csx1_7_CAS-III,Can2_Card1_17_CAS-III,Csm3gr7_4_CAS-III-A-III-D,Csx19_13_CAS-III-D,Csm3gr7_2_CAS-III-A-III-D,Csx10gr5_2_CAS-III-D,Csm3gr7_11_CAS-III-A-III-D,Cas10_7_CAS-III,Cas6_5_CAS-I-II-III-IV-V-VI;Positions=1,2,3,4,5,6,7,8,9,10,11,12,13;E-values=1.40e-15,2.90e-29,2.30e-72,3.00e-40,1.70e-63,2.00e-30,5.50e-75,1.20e-58,1.60e-32,0.00e+00,1.30e-21,3.00e-113,6.00e-39;CoverageSeq=0.535,0.466,0.87,0.992,0.789,0.877,0.825,0.985,0.708,0.998,0.957,0.789,0.969;CoverageHMM=0.921,1.0,0.996,0.976,0.984,0.761,0.805,0.971,1.0,1.0,0.884,1.0,0.991;Strand_Interference=-1;Strand_Adaptation=NA
SEQF2563.1|ATWK01000011.1	CCTyper	CDS	4913	5911	333	-	.	ID=SEQF2563.1|ATWK01000011.1_6_cas;Genome_ID=SEQF2563.1;Feature_type=CDS;Product=Cas Prediction : Can2_Card1_17_CAS-III;coding_strand=-;E-value=1.9999999999999998e-30;Score=102.9;Coverage_Seq=0.8768768768768769;Coverage_Hmm=0.7605263157894737
SEQF2563.1|ATWK01000011.1	CCTyper	CDS	11617	13092	492	-	.	ID=SEQF2563.1|ATWK01000011.1_12_cas;Genome_ID=SEQF2563.1;Feature_type=CDS;Product=Cas Prediction : Cas10_7_CAS-III;coding_strand=-;E-value=3e-113;Score=376.0;Coverage_Seq=0.7886178861788617;Coverage_Hmm=1.0
SEQF2563.1|ATWK01000011.1	CCTyper	CDS	2185	3177	331	-	.	ID=SEQF2563.1|ATWK01000011.1_3_cas;Genome_ID=SEQF2563.1;Feature_type=CDS;Product=Cas Prediction : Cas1_8_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=2.3e-72;Score=240.7;Coverage_Seq=0.8700906344410876;Coverage_Hmm=0.9964664310954063
SEQF2563.1|ATWK01000011.1	CCTyper	CDS	271	741	157	-	.	ID=SEQF2563.1|ATWK01000011.1_1_cas;Genome_ID=SEQF2563.1;Feature_type=CDS;Product=Cas Prediction : Cas2_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.4e-15;Score=54.6;Coverage_Seq=0.535031847133758;Coverage_Hmm=0.9213483146067416
SEQF2563.1|ATWK01000011.1	CCTyper	CDS	13096	13773	226	-	.	ID=SEQF2563.1|ATWK01000011.1_13_cas;Genome_ID=SEQF2563.1;Feature_type=CDS;Product=Cas Prediction : Cas6_5_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=6e-39;Score=131.0;Coverage_Seq=0.9690265486725663;Coverage_Hmm=0.9908675799086758
SEQF2563.1|ATWK01000011.1	CCTyper	CDS	11069	11620	184	-	.	ID=SEQF2563.1|ATWK01000011.1_11_cas;Genome_ID=SEQF2563.1;Feature_type=CDS;Product=Cas Prediction : Csm3gr7_11_CAS-III-A-III-D;coding_strand=-;E-value=1.3e-21;Score=74.2;Coverage_Seq=0.9565217391304348;Coverage_Hmm=0.8842592592592593
SEQF2563.1|ATWK01000011.1	CCTyper	CDS	8216	9601	462	-	.	ID=SEQF2563.1|ATWK01000011.1_9_cas;Genome_ID=SEQF2563.1;Feature_type=CDS;Product=Cas Prediction : Csm3gr7_2_CAS-III-A-III-D;coding_strand=-;E-value=1.6e-32;Score=110.6;Coverage_Seq=0.7077922077922078;Coverage_Hmm=1.0
SEQF2563.1|ATWK01000011.1	CCTyper	CDS	6124	7821	566	-	.	ID=SEQF2563.1|ATWK01000011.1_7_cas;Genome_ID=SEQF2563.1;Feature_type=CDS;Product=Cas Prediction : Csm3gr7_4_CAS-III-A-III-D;coding_strand=-;E-value=5.499999999999999e-75;Score=250.7;Coverage_Seq=0.8250883392226148;Coverage_Hmm=0.8046875
SEQF2563.1|ATWK01000011.1	CCTyper	CDS	9616	11064	483	-	.	ID=SEQF2563.1|ATWK01000011.1_10_cas;Genome_ID=SEQF2563.1;Feature_type=CDS;Product=Cas Prediction : Csx10gr5_2_CAS-III-D;coding_strand=-;E-value=0.0;Score=1168.0;Coverage_Seq=0.9979296066252588;Coverage_Hmm=1.0
SEQF2563.1|ATWK01000011.1	CCTyper	CDS	7825	8235	137	-	.	ID=SEQF2563.1|ATWK01000011.1_8_cas;Genome_ID=SEQF2563.1;Feature_type=CDS;Product=Cas Prediction : Csx19_13_CAS-III-D;coding_strand=-;E-value=1.2e-58;Score=194.1;Coverage_Seq=0.9854014598540146;Coverage_Hmm=0.9705882352941176
SEQF2563.1|ATWK01000011.1	CCTyper	CDS	3619	4911	431	-	.	ID=SEQF2563.1|ATWK01000011.1_5_cas;Genome_ID=SEQF2563.1;Feature_type=CDS;Product=Cas Prediction : Csx1_7_CAS-III;coding_strand=-;E-value=1.7e-63;Score=212.2;Coverage_Seq=0.7888631090487239;Coverage_Hmm=0.9838187702265372
SEQF2563.1|ATWK01000011.1	CCTyper	CDS	3282	3638	119	-	.	ID=SEQF2563.1|ATWK01000011.1_4_cas;Genome_ID=SEQF2563.1;Feature_type=CDS;Product=Cas Prediction : Csx20_1_CAS-I-III;coding_strand=-;E-value=2.9999999999999998e-40;Score=134.8;Coverage_Seq=0.9915966386554622;Coverage_Hmm=0.976
SEQF2563.1|ATWK01000011.1	CCTyper	CDS	1064	2080	339	-	.	ID=SEQF2563.1|ATWK01000011.1_2_cas;Genome_ID=SEQF2563.1;Feature_type=CDS;Product=Cas Prediction : PrimPol_1_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=2.8999999999999997e-29;Score=99.0;Coverage_Seq=0.46607669616519176;Coverage_Hmm=1.0