SEQF3078.1|JYGJ01000001.1	CCTyper	repeat_region	62614	63447	834	+	.	ID=SEQF3078.1|JYGJ01000001.1_1;Genome_ID=SEQF3078.1;Note=Predictor:CCtyper;Start:62614;End:63447;Consensus_Repeat:GGTTAGAACCCACTAATCCTCGCGAGGGGACGGAAAC;Number_of_Repeats:12;Repeat_Length:37;Average_Spacer_Length:35.5;Repeat_Identity:79.2;Spacer_Identity:45.6;Spacer_Length_Sem:0.3;Trusted:True;Cas_Type_Prediction: III-A;Cas_Subtype_Prediction:III-A;Subtype_Probability:0.969;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3078.1|JYGJ01000001.1	CCTyper	direct_repeat	62614	62650	37	+	.	ID=SEQF3078.1|JYGJ01000001.1_1_REPEAT1;Parent=SEQF3078.1|JYGJ01000001.1_1;Note=GTTAGACCCCCCCTAAACCTCGAGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3078.1|JYGJ01000001.1	CCTyper	binding_site	62651	62687	37	+	.	ID=SEQF3078.1|JYGJ01000001.1_1_SPACER1;Parent=SEQF3078.1|JYGJ01000001.1_1;Note=TTCCTGTTCTACCGTCAATCCAGCCGCTTTCGCTTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3078.1|JYGJ01000001.1	CCTyper	direct_repeat	62688	62724	37	+	.	ID=SEQF3078.1|JYGJ01000001.1_1_REPEAT2;Parent=SEQF3078.1|JYGJ01000001.1_1;Note=GTTAGCCCCCCCCTAAACCTCGCGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3078.1|JYGJ01000001.1	CCTyper	binding_site	62725	62760	36	+	.	ID=SEQF3078.1|JYGJ01000001.1_1_SPACER2;Parent=SEQF3078.1|JYGJ01000001.1_1;Note=AATCATCTTTGTAATGCTAAAGTGAAATTCCTTATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3078.1|JYGJ01000001.1	CCTyper	direct_repeat	62761	62797	37	+	.	ID=SEQF3078.1|JYGJ01000001.1_1_REPEAT3;Parent=SEQF3078.1|JYGJ01000001.1_1;Note=GGTTAGAACCCACTAATCCTCGCGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3078.1|JYGJ01000001.1	CCTyper	binding_site	62798	62832	35	+	.	ID=SEQF3078.1|JYGJ01000001.1_1_SPACER3;Parent=SEQF3078.1|JYGJ01000001.1_1;Note=CCAGCCTCGTCAGTTTGACCGATGGCCATGTAATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3078.1|JYGJ01000001.1	CCTyper	direct_repeat	62833	62869	37	+	.	ID=SEQF3078.1|JYGJ01000001.1_1_REPEAT4;Parent=SEQF3078.1|JYGJ01000001.1_1;Note=GGTTAGAACCCCCTAATCCTCGAGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3078.1|JYGJ01000001.1	CCTyper	binding_site	62870	62904	35	+	.	ID=SEQF3078.1|JYGJ01000001.1_1_SPACER4;Parent=SEQF3078.1|JYGJ01000001.1_1;Note=TCATTAAGCCTGTTAATCTTGATGATTGCTGCCAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3078.1|JYGJ01000001.1	CCTyper	direct_repeat	62905	62941	37	+	.	ID=SEQF3078.1|JYGJ01000001.1_1_REPEAT5;Parent=SEQF3078.1|JYGJ01000001.1_1;Note=CGTTAGAACCCCCTAATCCTCGAGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3078.1|JYGJ01000001.1	CCTyper	binding_site	62942	62975	34	+	.	ID=SEQF3078.1|JYGJ01000001.1_1_SPACER5;Parent=SEQF3078.1|JYGJ01000001.1_1;Note=GAAACGTATAGTCTCGCACAGATACCATTTCAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3078.1|JYGJ01000001.1	CCTyper	direct_repeat	62976	63012	37	+	.	ID=SEQF3078.1|JYGJ01000001.1_1_REPEAT6;Parent=SEQF3078.1|JYGJ01000001.1_1;Note=CGTTAGACCCCCCTAATCCTCGCGAGGGTACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3078.1|JYGJ01000001.1	CCTyper	binding_site	63013	63046	34	+	.	ID=SEQF3078.1|JYGJ01000001.1_1_SPACER6;Parent=SEQF3078.1|JYGJ01000001.1_1;Note=GGAGCACGGCGGACATTGATAGCATCCACAGTCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3078.1|JYGJ01000001.1	CCTyper	direct_repeat	63047	63083	37	+	.	ID=SEQF3078.1|JYGJ01000001.1_1_REPEAT7;Parent=SEQF3078.1|JYGJ01000001.1_1;Note=GGTTAGACCCCCCTAAACCTCGCGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3078.1|JYGJ01000001.1	CCTyper	binding_site	63084	63119	36	+	.	ID=SEQF3078.1|JYGJ01000001.1_1_SPACER7;Parent=SEQF3078.1|JYGJ01000001.1_1;Note=AATCATCTTTGTAATGCTAAAGTGAAATTCCTTATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3078.1|JYGJ01000001.1	CCTyper	direct_repeat	63120	63156	37	+	.	ID=SEQF3078.1|JYGJ01000001.1_1_REPEAT8;Parent=SEQF3078.1|JYGJ01000001.1_1;Note=GGTTAGAACCCACTAATCCTCGCGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3078.1|JYGJ01000001.1	CCTyper	binding_site	63157	63193	37	+	.	ID=SEQF3078.1|JYGJ01000001.1_1_SPACER8;Parent=SEQF3078.1|JYGJ01000001.1_1;Note=AAATTGACGACGACCATTGATGATGACAGGGCGCTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3078.1|JYGJ01000001.1	CCTyper	direct_repeat	63194	63230	37	+	.	ID=SEQF3078.1|JYGJ01000001.1_1_REPEAT9;Parent=SEQF3078.1|JYGJ01000001.1_1;Note=GTTAGAACCCCCCTAATCCTCGCGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3078.1|JYGJ01000001.1	CCTyper	binding_site	63231	63265	35	+	.	ID=SEQF3078.1|JYGJ01000001.1_1_SPACER9;Parent=SEQF3078.1|JYGJ01000001.1_1;Note=TCAACTGCTCTAGAGTGAGTATCATTGTAGTAAGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3078.1|JYGJ01000001.1	CCTyper	direct_repeat	63266	63302	37	+	.	ID=SEQF3078.1|JYGJ01000001.1_1_REPEAT10;Parent=SEQF3078.1|JYGJ01000001.1_1;Note=GTTAGAACCCTCCATATCCTCGAGAGGGAACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3078.1|JYGJ01000001.1	CCTyper	binding_site	63303	63338	36	+	.	ID=SEQF3078.1|JYGJ01000001.1_1_SPACER10;Parent=SEQF3078.1|JYGJ01000001.1_1;Note=GGATTTGCTGATTTTGCTTGTCGATAGTCTGCATGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3078.1|JYGJ01000001.1	CCTyper	direct_repeat	63339	63375	37	+	.	ID=SEQF3078.1|JYGJ01000001.1_1_REPEAT11;Parent=SEQF3078.1|JYGJ01000001.1_1;Note=TGTTAGATCCCCCAAACCCTCGCGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3078.1|JYGJ01000001.1	CCTyper	binding_site	63376	63410	35	+	.	ID=SEQF3078.1|JYGJ01000001.1_1_SPACER11;Parent=SEQF3078.1|JYGJ01000001.1_1;Note=TCATTTTGGTAATCGGTCATTGGTTTACCGATTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3078.1|JYGJ01000001.1	CCTyper	direct_repeat	63411	63447	37	+	.	ID=SEQF3078.1|JYGJ01000001.1_1_REPEAT12;Parent=SEQF3078.1|JYGJ01000001.1_1;Note=GTTAGCCCCCTCCTAAACCTCGAGAGGGGACAGAGTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3078.1|JYGJ01000001.1	CCTyper	repeat_region	169225	170049	825	+	.	ID=SEQF3078.1|JYGJ01000001.1_2;Genome_ID=SEQF3078.1;Note=Predictor:CCtyper;Start:169225;End:170049;Consensus_Repeat:GTTATACCTTACCTATAAGGAATTGAGAC;Number_of_Repeats:12;Repeat_Length:29;Average_Spacer_Length:43.4;Repeat_Identity:94.9;Spacer_Identity:44.6;Spacer_Length_Sem:0.9;Trusted:True;Cas_Type_Prediction: III-B;Cas_Subtype_Prediction:III-B;Subtype_Probability:0.991;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3078.1|JYGJ01000001.1	CCTyper	direct_repeat	169225	169253	29	+	.	ID=SEQF3078.1|JYGJ01000001.1_2_REPEAT1;Parent=SEQF3078.1|JYGJ01000001.1_2;Note=GTTATACCTTACCTATAAGGAATTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3078.1|JYGJ01000001.1	CCTyper	binding_site	169254	169296	43	+	.	ID=SEQF3078.1|JYGJ01000001.1_2_SPACER1;Parent=SEQF3078.1|JYGJ01000001.1_2;Note=TAGTAAAACACCACCTTTTTAATAATACTTGTCTAATAAGACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3078.1|JYGJ01000001.1	CCTyper	direct_repeat	169297	169325	29	+	.	ID=SEQF3078.1|JYGJ01000001.1_2_REPEAT2;Parent=SEQF3078.1|JYGJ01000001.1_2;Note=GTTATACCTTACCTATAAGGAATTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3078.1|JYGJ01000001.1	CCTyper	binding_site	169326	169372	47	+	.	ID=SEQF3078.1|JYGJ01000001.1_2_SPACER2;Parent=SEQF3078.1|JYGJ01000001.1_2;Note=AAATTACTATAGCCATTATAATCACCTTCTTTCTATGTTTTGGCTAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3078.1|JYGJ01000001.1	CCTyper	direct_repeat	169373	169401	29	+	.	ID=SEQF3078.1|JYGJ01000001.1_2_REPEAT3;Parent=SEQF3078.1|JYGJ01000001.1_2;Note=GTTATACCTTACCTATAAGGAATTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3078.1|JYGJ01000001.1	CCTyper	binding_site	169402	169440	39	+	.	ID=SEQF3078.1|JYGJ01000001.1_2_SPACER3;Parent=SEQF3078.1|JYGJ01000001.1_2;Note=GAAAAGTACTGGCATATTAGCCACCTTCTTTCTTAATTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3078.1|JYGJ01000001.1	CCTyper	direct_repeat	169441	169469	29	+	.	ID=SEQF3078.1|JYGJ01000001.1_2_REPEAT4;Parent=SEQF3078.1|JYGJ01000001.1_2;Note=GTTATACCTTACCTATAAGGAATTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3078.1|JYGJ01000001.1	CCTyper	binding_site	169470	169511	42	+	.	ID=SEQF3078.1|JYGJ01000001.1_2_SPACER4;Parent=SEQF3078.1|JYGJ01000001.1_2;Note=AGATTCCAAGGCGCAATATGGTAGATAGGTAAACCTTCTACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3078.1|JYGJ01000001.1	CCTyper	direct_repeat	169512	169540	29	+	.	ID=SEQF3078.1|JYGJ01000001.1_2_REPEAT5;Parent=SEQF3078.1|JYGJ01000001.1_2;Note=GTTATACCTTACCTATAAGGAATTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3078.1|JYGJ01000001.1	CCTyper	binding_site	169541	169581	41	+	.	ID=SEQF3078.1|JYGJ01000001.1_2_SPACER5;Parent=SEQF3078.1|JYGJ01000001.1_2;Note=GTAAAATTGGTATAAAAGTCGCAGTAAAAGACCCTCATACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3078.1|JYGJ01000001.1	CCTyper	direct_repeat	169582	169610	29	+	.	ID=SEQF3078.1|JYGJ01000001.1_2_REPEAT6;Parent=SEQF3078.1|JYGJ01000001.1_2;Note=GTTATACCTTACCTATAAGGAATTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3078.1|JYGJ01000001.1	CCTyper	binding_site	169611	169654	44	+	.	ID=SEQF3078.1|JYGJ01000001.1_2_SPACER6;Parent=SEQF3078.1|JYGJ01000001.1_2;Note=TTAAATTCGTGCGTTCTCTCCTCATGATAGGTATGCAAGTTACT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3078.1|JYGJ01000001.1	CCTyper	direct_repeat	169655	169683	29	+	.	ID=SEQF3078.1|JYGJ01000001.1_2_REPEAT7;Parent=SEQF3078.1|JYGJ01000001.1_2;Note=GTTATACCTTACCTATAAGGAATTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3078.1|JYGJ01000001.1	CCTyper	binding_site	169684	169729	46	+	.	ID=SEQF3078.1|JYGJ01000001.1_2_SPACER7;Parent=SEQF3078.1|JYGJ01000001.1_2;Note=AATATTGAATATATCGGTTTATTAGTTTGTACAATTAATACTCTAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3078.1|JYGJ01000001.1	CCTyper	direct_repeat	169730	169758	29	+	.	ID=SEQF3078.1|JYGJ01000001.1_2_REPEAT8;Parent=SEQF3078.1|JYGJ01000001.1_2;Note=GTTATGCCTTACCTATAAGGAATTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3078.1|JYGJ01000001.1	CCTyper	binding_site	169759	169805	47	+	.	ID=SEQF3078.1|JYGJ01000001.1_2_SPACER8;Parent=SEQF3078.1|JYGJ01000001.1_2;Note=ATTTTTTCAATTTTATACCGATAATCATCTTCTAGGTAAGCTACAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3078.1|JYGJ01000001.1	CCTyper	direct_repeat	169806	169834	29	+	.	ID=SEQF3078.1|JYGJ01000001.1_2_REPEAT9;Parent=SEQF3078.1|JYGJ01000001.1_2;Note=GTTATACCTTACCTATAAGGAATTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3078.1|JYGJ01000001.1	CCTyper	binding_site	169835	169873	39	+	.	ID=SEQF3078.1|JYGJ01000001.1_2_SPACER9;Parent=SEQF3078.1|JYGJ01000001.1_2;Note=GAAATTCCAGTTGGTTTTTCACCATTTAAAATTTCGAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3078.1|JYGJ01000001.1	CCTyper	direct_repeat	169874	169902	29	+	.	ID=SEQF3078.1|JYGJ01000001.1_2_REPEAT10;Parent=SEQF3078.1|JYGJ01000001.1_2;Note=GTTATACCTTACCTATAAGGAATTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3078.1|JYGJ01000001.1	CCTyper	binding_site	169903	169947	45	+	.	ID=SEQF3078.1|JYGJ01000001.1_2_SPACER10;Parent=SEQF3078.1|JYGJ01000001.1_2;Note=TCATATATTGACCTCATTTCTAAAAGAACTATTTATAAAAAATAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3078.1|JYGJ01000001.1	CCTyper	direct_repeat	169948	169976	29	+	.	ID=SEQF3078.1|JYGJ01000001.1_2_REPEAT11;Parent=SEQF3078.1|JYGJ01000001.1_2;Note=GTTATACCTTACCTATAAGGAATTGGGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3078.1|JYGJ01000001.1	CCTyper	binding_site	169977	170020	44	+	.	ID=SEQF3078.1|JYGJ01000001.1_2_SPACER11;Parent=SEQF3078.1|JYGJ01000001.1_2;Note=TTGAGTACGTTCATCAAAAATCCGCCAGAATTTTTCAAAATTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3078.1|JYGJ01000001.1	CCTyper	direct_repeat	170021	170049	29	+	.	ID=SEQF3078.1|JYGJ01000001.1_2_REPEAT12;Parent=SEQF3078.1|JYGJ01000001.1_2;Note=GTTATACCTTACCTATAAGGAATTGTTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3078.1|JYGJ01000001.1	CCTyper	OPERON	340459	356291	15833	+	.	ID=SEQF3078.1|JYGJ01000001.1@8;Genome_ID=SEQF3078.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type III-D;Complete_Interference=50%;Complete_Adaptation=NA;Best_type=III-D;Best_score=9.0;Genes=AbiEii_0_CAS-III,Csx1_7_CAS-III,Cas10_7_CAS-III,Csm3gr7_12_CAS-III-A-III-D,Csx19_1_CAS-III-D,Csm3gr7_4_CAS-III-A-III-D;Positions=314,318,320,322,323,324;E-values=3.60e-05,6.20e-34,3.90e-82,4.10e-29,1.40e-18,6.00e-72;CoverageSeq=0.354,0.817,0.804,0.809,0.659,0.839;CoverageHMM=0.335,0.99,0.973,0.995,0.66,0.808;Strand_Interference=1;Strand_Adaptation=NA
SEQF3078.1|JYGJ01000001.1	CCTyper	CDS	340459	341262	268	+	.	ID=SEQF3078.1|JYGJ01000001.1_314_cas;Genome_ID=SEQF3078.1;Feature_type=CDS;Product=Cas Prediction : AbiEii_0_CAS-III;coding_strand=+;E-value=3.6e-05;Score=20.3;Coverage_Seq=0.35447761194029853;Coverage_Hmm=0.3345070422535211
SEQF3078.1|JYGJ01000001.1	CCTyper	CDS	348948	350525	526	+	.	ID=SEQF3078.1|JYGJ01000001.1_320_cas;Genome_ID=SEQF3078.1;Feature_type=CDS;Product=Cas Prediction : Cas10_7_CAS-III;coding_strand=+;E-value=3.9e-82;Score=273.2;Coverage_Seq=0.8041825095057035;Coverage_Hmm=0.973170731707317
SEQF3078.1|JYGJ01000001.1	CCTyper	CDS	352624	353988	455	+	.	ID=SEQF3078.1|JYGJ01000001.1_322_cas;Genome_ID=SEQF3078.1;Feature_type=CDS;Product=Cas Prediction : Csm3gr7_12_CAS-III-A-III-D;coding_strand=+;E-value=4.1e-29;Score=99.1;Coverage_Seq=0.8087912087912088;Coverage_Hmm=0.9949748743718593
SEQF3078.1|JYGJ01000001.1	CCTyper	CDS	354498	356291	598	+	.	ID=SEQF3078.1|JYGJ01000001.1_324_cas;Genome_ID=SEQF3078.1;Feature_type=CDS;Product=Cas Prediction : Csm3gr7_4_CAS-III-A-III-D;coding_strand=+;E-value=6e-72;Score=240.3;Coverage_Seq=0.8394648829431438;Coverage_Hmm=0.8078125
SEQF3078.1|JYGJ01000001.1	CCTyper	CDS	353960	354505	182	+	.	ID=SEQF3078.1|JYGJ01000001.1_323_cas;Genome_ID=SEQF3078.1;Feature_type=CDS;Product=Cas Prediction : Csx19_1_CAS-III-D;coding_strand=+;E-value=1.4e-18;Score=63.9;Coverage_Seq=0.6593406593406593;Coverage_Hmm=0.66
SEQF3078.1|JYGJ01000001.1	CCTyper	CDS	346214	347737	508	+	.	ID=SEQF3078.1|JYGJ01000001.1_318_cas;Genome_ID=SEQF3078.1;Feature_type=CDS;Product=Cas Prediction : Csx1_7_CAS-III;coding_strand=+;E-value=6.2000000000000004e-34;Score=114.7;Coverage_Seq=0.8169291338582677;Coverage_Hmm=0.9902912621359223