SEQF3140.1|CP040010.1	CCTyper	repeat_region	263458	264285	828	+	.	ID=SEQF3140.1|CP040010.1_1;Genome_ID=SEQF3140.1;Note=Predictor:CCtyper;Start:263458;End:264285;Consensus_Repeat:GTTTCAGTACCATTCAATATAACACTACTGTAAAAC;Number_of_Repeats:13;Repeat_Length:36;Average_Spacer_Length:30;Repeat_Identity:100.0;Spacer_Identity:44.6;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.97;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3140.1|CP040010.1	CCTyper	direct_repeat	263458	263493	36	+	.	ID=SEQF3140.1|CP040010.1_1_REPEAT1;Parent=SEQF3140.1|CP040010.1_1;Note=GTTTCAGTACCATTCAATATAACACTACTGTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3140.1|CP040010.1	CCTyper	binding_site	263494	263523	30	+	.	ID=SEQF3140.1|CP040010.1_1_SPACER1;Parent=SEQF3140.1|CP040010.1_1;Note=CGAAGAAGCCAGCATCCTTTGCAATAAACT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3140.1|CP040010.1	CCTyper	direct_repeat	263524	263559	36	+	.	ID=SEQF3140.1|CP040010.1_1_REPEAT2;Parent=SEQF3140.1|CP040010.1_1;Note=GTTTCAGTACCATTCAATATAACACTACTGTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3140.1|CP040010.1	CCTyper	binding_site	263560	263589	30	+	.	ID=SEQF3140.1|CP040010.1_1_SPACER2;Parent=SEQF3140.1|CP040010.1_1;Note=GGTGACTACAGGCGAGCCTTTTATTCGCAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3140.1|CP040010.1	CCTyper	direct_repeat	263590	263625	36	+	.	ID=SEQF3140.1|CP040010.1_1_REPEAT3;Parent=SEQF3140.1|CP040010.1_1;Note=GTTTCAGTACCATTCAATATAACACTACTGTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3140.1|CP040010.1	CCTyper	binding_site	263626	263655	30	+	.	ID=SEQF3140.1|CP040010.1_1_SPACER3;Parent=SEQF3140.1|CP040010.1_1;Note=CCTCTGCGATAAGTGTATAAGTGTCTCTAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3140.1|CP040010.1	CCTyper	direct_repeat	263656	263691	36	+	.	ID=SEQF3140.1|CP040010.1_1_REPEAT4;Parent=SEQF3140.1|CP040010.1_1;Note=GTTTCAGTACCATTCAATATAACACTACTGTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3140.1|CP040010.1	CCTyper	binding_site	263692	263721	30	+	.	ID=SEQF3140.1|CP040010.1_1_SPACER4;Parent=SEQF3140.1|CP040010.1_1;Note=ACGTGGTCTGAGGGTAAGTATCCCTGCACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3140.1|CP040010.1	CCTyper	direct_repeat	263722	263757	36	+	.	ID=SEQF3140.1|CP040010.1_1_REPEAT5;Parent=SEQF3140.1|CP040010.1_1;Note=GTTTCAGTACCATTCAATATAACACTACTGTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3140.1|CP040010.1	CCTyper	binding_site	263758	263787	30	+	.	ID=SEQF3140.1|CP040010.1_1_SPACER5;Parent=SEQF3140.1|CP040010.1_1;Note=CACCACCAAATGACATCATGAGATTATGGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3140.1|CP040010.1	CCTyper	direct_repeat	263788	263823	36	+	.	ID=SEQF3140.1|CP040010.1_1_REPEAT6;Parent=SEQF3140.1|CP040010.1_1;Note=GTTTCAGTACCATTCAATATAACACTACTGTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3140.1|CP040010.1	CCTyper	binding_site	263824	263853	30	+	.	ID=SEQF3140.1|CP040010.1_1_SPACER6;Parent=SEQF3140.1|CP040010.1_1;Note=TACCCGACAACTTGATATCACGCTTCAGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3140.1|CP040010.1	CCTyper	direct_repeat	263854	263889	36	+	.	ID=SEQF3140.1|CP040010.1_1_REPEAT7;Parent=SEQF3140.1|CP040010.1_1;Note=GTTTCAGTACCATTCAATATAACACTACTGTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3140.1|CP040010.1	CCTyper	binding_site	263890	263919	30	+	.	ID=SEQF3140.1|CP040010.1_1_SPACER7;Parent=SEQF3140.1|CP040010.1_1;Note=ACTGATCACGGGCGTTTTCACGCTTTTCAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3140.1|CP040010.1	CCTyper	direct_repeat	263920	263955	36	+	.	ID=SEQF3140.1|CP040010.1_1_REPEAT8;Parent=SEQF3140.1|CP040010.1_1;Note=GTTTCAGTACCATTCAATATAACACTACTGTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3140.1|CP040010.1	CCTyper	binding_site	263956	263985	30	+	.	ID=SEQF3140.1|CP040010.1_1_SPACER8;Parent=SEQF3140.1|CP040010.1_1;Note=TGCTACTTTTATTTCTCAAAACTTTACTAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3140.1|CP040010.1	CCTyper	direct_repeat	263986	264021	36	+	.	ID=SEQF3140.1|CP040010.1_1_REPEAT9;Parent=SEQF3140.1|CP040010.1_1;Note=GTTTCAGTACCATTCAATATAACACTACTGTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3140.1|CP040010.1	CCTyper	binding_site	264022	264051	30	+	.	ID=SEQF3140.1|CP040010.1_1_SPACER9;Parent=SEQF3140.1|CP040010.1_1;Note=AAACCGGTCAGTGTATACTTACTGTCAATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3140.1|CP040010.1	CCTyper	direct_repeat	264052	264087	36	+	.	ID=SEQF3140.1|CP040010.1_1_REPEAT10;Parent=SEQF3140.1|CP040010.1_1;Note=GTTTCAGTACCATTCAATATAACACTACTGTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3140.1|CP040010.1	CCTyper	binding_site	264088	264117	30	+	.	ID=SEQF3140.1|CP040010.1_1_SPACER10;Parent=SEQF3140.1|CP040010.1_1;Note=TCCGTTTTCAGTCGATGATGATTACGACAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3140.1|CP040010.1	CCTyper	direct_repeat	264118	264153	36	+	.	ID=SEQF3140.1|CP040010.1_1_REPEAT11;Parent=SEQF3140.1|CP040010.1_1;Note=GTTTCAGTACCATTCAATATAACACTACTGTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3140.1|CP040010.1	CCTyper	binding_site	264154	264183	30	+	.	ID=SEQF3140.1|CP040010.1_1_SPACER11;Parent=SEQF3140.1|CP040010.1_1;Note=ACGTGGTCTGAGGGTAAGTATCCCTGCACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3140.1|CP040010.1	CCTyper	direct_repeat	264184	264219	36	+	.	ID=SEQF3140.1|CP040010.1_1_REPEAT12;Parent=SEQF3140.1|CP040010.1_1;Note=GTTTCAGTACCATTCAATATAACACTACTGTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3140.1|CP040010.1	CCTyper	binding_site	264220	264249	30	+	.	ID=SEQF3140.1|CP040010.1_1_SPACER12;Parent=SEQF3140.1|CP040010.1_1;Note=ACTCCTCCTTGATTACTTTCTTGATAAACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3140.1|CP040010.1	CCTyper	direct_repeat	264250	264285	36	+	.	ID=SEQF3140.1|CP040010.1_1_REPEAT13;Parent=SEQF3140.1|CP040010.1_1;Note=GTTTCAGTACCATTCAATATAACACTACTGTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3140.1|CP040010.1	CCTyper	OPERON	264340	270252	5913	-	.	ID=SEQF3140.1|CP040010.1@6;Genome_ID=SEQF3140.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=8.0;Genes=Csn2_0_CAS-II-A,Cas2_5_CAS-I-II-III-IV-V-VI,Cas1_0_II,Cas9_0_II,Cas9_0_II;Positions=259,260,261,262,263;E-values=3.80e-32,5.20e-32,1.10e-93,3.00e-127,1.10e-52;CoverageSeq=0.965,0.97,0.928,0.603,0.96;CoverageHMM=0.987,0.853,0.996,0.651,0.26;Strand_Interference=-1;Strand_Adaptation=-1
SEQF3140.1|CP040010.1	CCTyper	CDS	265349	266227	293	-	.	ID=SEQF3140.1|CP040010.1_261_cas;Genome_ID=SEQF3140.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_II;coding_strand=-;E-value=1.1e-93;Score=309.1;Coverage_Seq=0.9283276450511946;Coverage_Hmm=0.9964028776978417
SEQF3140.1|CP040010.1	CCTyper	CDS	265026	265325	100	-	.	ID=SEQF3140.1|CP040010.1_260_cas;Genome_ID=SEQF3140.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=5.200000000000001e-32;Score=106.2;Coverage_Seq=0.97;Coverage_Hmm=0.853448275862069
SEQF3140.1|CP040010.1	CCTyper	CDS	266231	268804	858	-	.	ID=SEQF3140.1|CP040010.1_262_cas;Genome_ID=SEQF3140.1;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=-;E-value=3e-127;Score=421.7;Coverage_Seq=0.6025641025641025;Coverage_Hmm=0.6506024096385542
SEQF3140.1|CP040010.1	CCTyper	CDS	268984	270252	423	-	.	ID=SEQF3140.1|CP040010.1_263_cas;Genome_ID=SEQF3140.1;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=-;E-value=1.1e-52;Score=175.0;Coverage_Seq=0.9598108747044918;Coverage_Hmm=0.26024096385542167
SEQF3140.1|CP040010.1	CCTyper	CDS	264340	265029	230	-	.	ID=SEQF3140.1|CP040010.1_259_cas;Genome_ID=SEQF3140.1;Feature_type=CDS;Product=Cas Prediction : Csn2_0_CAS-II-A;coding_strand=-;E-value=3.8e-32;Score=107.2;Coverage_Seq=0.9652173913043478;Coverage_Hmm=0.9865470852017937