SEQF3374.1|ALYR01000053.1	CCTyper	repeat_region	24304	24467	164	+	.	ID=SEQF3374.1|ALYR01000053.1-1_1;Genome_ID=SEQF3374.1;Note=Predictor:CCtyper;Start:24304;End:24467;Consensus_Repeat:GTTTTGGAACCATTCGAAACAACACAGCTCTA;Number_of_Repeats:3;Repeat_Length:35.7;Average_Spacer_Length:28.5;Repeat_Identity:86.1;Spacer_Identity:35.7;Spacer_Length_Sem:0.5;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:II-C;Subtype_Probability:0.453;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3374.1|ALYR01000053.1	CCTyper	direct_repeat	24304	24340	37	+	.	ID=SEQF3374.1|ALYR01000053.1-1_1_REPEAT1;Parent=SEQF3374.1|ALYR01000053.1-1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3374.1|ALYR01000053.1	CCTyper	binding_site	24341	24369	29	+	.	ID=SEQF3374.1|ALYR01000053.1-1_1_SPACER1;Parent=SEQF3374.1|ALYR01000053.1-1_1;Note=GTTGCTTCAAAATCTTTCTGGATGCGGTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3374.1|ALYR01000053.1	CCTyper	direct_repeat	24370	24407	38	+	.	ID=SEQF3374.1|ALYR01000053.1-1_1_REPEAT2;Parent=SEQF3374.1|ALYR01000053.1-1_1;Note=GTTTTGGAACCATTTGAAACAACACAGCTCTAAAACCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3374.1|ALYR01000053.1	CCTyper	binding_site	24408	24435	28	+	.	ID=SEQF3374.1|ALYR01000053.1-1_1_SPACER2;Parent=SEQF3374.1|ALYR01000053.1-1_1;Note=ACGATAACACGTAATATATCAGTTGTAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3374.1|ALYR01000053.1	CCTyper	direct_repeat	24436	24467	32	+	.	ID=SEQF3374.1|ALYR01000053.1-1_1_REPEAT3;Parent=SEQF3374.1|ALYR01000053.1-1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3374.1|ALYR01000029.1	CCTyper	OPERON	874	6770	5897	-	.	ID=SEQF3374.1|ALYR01000029.1@1;Genome_ID=SEQF3374.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Csn2_1_CAS-II-A,Cas2_5_CAS-I-II-III-IV-V-VI,Cas1_4_CAS-I-II-III-IV-V-VI,Cas9_1_II;Positions=3,4,5,6;E-values=1.00e-106,1.40e-51,2.60e-95,0.00e+00;CoverageSeq=0.982,0.965,0.933,0.98;CoverageHMM=0.995,0.983,0.931,0.999;Strand_Interference=-1;Strand_Adaptation=-1
SEQF3374.1|ALYR01000029.1	CCTyper	CDS	1867	2673	269	-	.	ID=SEQF3374.1|ALYR01000029.1_5_cas;Genome_ID=SEQF3374.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=2.6e-95;Score=315.5;Coverage_Seq=0.9330855018587361;Coverage_Hmm=0.9309090909090909
SEQF3374.1|ALYR01000029.1	CCTyper	CDS	1526	1870	115	-	.	ID=SEQF3374.1|ALYR01000029.1_4_cas;Genome_ID=SEQF3374.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.4e-51;Score=170.4;Coverage_Seq=0.9652173913043478;Coverage_Hmm=0.9827586206896551
SEQF3374.1|ALYR01000029.1	CCTyper	CDS	2670	6770	1367	-	.	ID=SEQF3374.1|ALYR01000029.1_6_cas;Genome_ID=SEQF3374.1;Feature_type=CDS;Product=Cas Prediction : Cas9_1_II;coding_strand=-;E-value=0.0;Score=1273.1;Coverage_Seq=0.9802487198244331;Coverage_Hmm=0.9991071428571429
SEQF3374.1|ALYR01000029.1	CCTyper	CDS	874	1536	221	-	.	ID=SEQF3374.1|ALYR01000029.1_3_cas;Genome_ID=SEQF3374.1;Feature_type=CDS;Product=Cas Prediction : Csn2_1_CAS-II-A;coding_strand=-;E-value=1e-106;Score=352.3;Coverage_Seq=0.9819004524886877;Coverage_Hmm=0.9954128440366973