SEQF3395.1|CP013237.1	CCTyper	repeat_region	292186	292552	367	+	.	ID=SEQF3395.1|CP013237.1_1;Genome_ID=SEQF3395.1;Note=Predictor:CCtyper;Start:292186;End:292552;Consensus_Repeat:GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Number_of_Repeats:6;Repeat_Length:36;Average_Spacer_Length:30.2;Repeat_Identity:89.1;Spacer_Identity:42.3;Spacer_Length_Sem:0.2;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.549;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3395.1|CP013237.1	CCTyper	direct_repeat	292186	292221	36	+	.	ID=SEQF3395.1|CP013237.1_1_REPEAT1;Parent=SEQF3395.1|CP013237.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3395.1|CP013237.1	CCTyper	binding_site	292222	292251	30	+	.	ID=SEQF3395.1|CP013237.1_1_SPACER1;Parent=SEQF3395.1|CP013237.1_1;Note=AAGCTCCGTCTGTCTTGCTCTTCGCATTCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3395.1|CP013237.1	CCTyper	direct_repeat	292252	292287	36	+	.	ID=SEQF3395.1|CP013237.1_1_REPEAT2;Parent=SEQF3395.1|CP013237.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3395.1|CP013237.1	CCTyper	binding_site	292288	292317	30	+	.	ID=SEQF3395.1|CP013237.1_1_SPACER2;Parent=SEQF3395.1|CP013237.1_1;Note=CTTTGTAACTCAATGTTACTAACTGAAGGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3395.1|CP013237.1	CCTyper	direct_repeat	292318	292353	36	+	.	ID=SEQF3395.1|CP013237.1_1_REPEAT3;Parent=SEQF3395.1|CP013237.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3395.1|CP013237.1	CCTyper	binding_site	292354	292384	31	+	.	ID=SEQF3395.1|CP013237.1_1_SPACER3;Parent=SEQF3395.1|CP013237.1_1;Note=CAATTTTATCGGTTCCACCTAGACAACCAGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3395.1|CP013237.1	CCTyper	direct_repeat	292385	292420	36	+	.	ID=SEQF3395.1|CP013237.1_1_REPEAT4;Parent=SEQF3395.1|CP013237.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3395.1|CP013237.1	CCTyper	binding_site	292421	292450	30	+	.	ID=SEQF3395.1|CP013237.1_1_SPACER4;Parent=SEQF3395.1|CP013237.1_1;Note=ATCTGAGATTTAACAAAATCATCTTATCAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3395.1|CP013237.1	CCTyper	direct_repeat	292451	292486	36	+	.	ID=SEQF3395.1|CP013237.1_1_REPEAT5;Parent=SEQF3395.1|CP013237.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3395.1|CP013237.1	CCTyper	binding_site	292487	292516	30	+	.	ID=SEQF3395.1|CP013237.1_1_SPACER5;Parent=SEQF3395.1|CP013237.1_1;Note=ACTAGCAACACAGCACCTTTCAGCGCAAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3395.1|CP013237.1	CCTyper	direct_repeat	292517	292552	36	+	.	ID=SEQF3395.1|CP013237.1_1_REPEAT6;Parent=SEQF3395.1|CP013237.1_1;Note=GTTTTAGAGCCATGTTAGTTACTGATTTACTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3395.1|CP013237.1	CCTyper	OPERON	285453	294136	8684	+	.	ID=SEQF3395.1|CP013237.1@8;Genome_ID=SEQF3395.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Cas9_1_II,Cas1_4_CAS-I-II-III-IV-V-VI,Cas2_5_CAS-I-II-III-IV-V-VI,Csn2_1_CAS-II-A,Csa5gr11_3_CAS-I-A;Positions=283,284,285,286,290;E-values=0.00e+00,1.40e-103,1.40e-51,2.80e-106,2.00e-04;CoverageSeq=0.996,0.931,0.965,0.982,0.663;CoverageHMM=0.999,0.996,0.983,0.995,0.389;Strand_Interference=1;Strand_Adaptation=1
SEQF3395.1|CP013237.1	CCTyper	CDS	289490	290356	289	+	.	ID=SEQF3395.1|CP013237.1_284_cas;Genome_ID=SEQF3395.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.4e-103;Score=342.6;Coverage_Seq=0.9307958477508651;Coverage_Hmm=0.9963636363636363
SEQF3395.1|CP013237.1	CCTyper	CDS	290353	290697	115	+	.	ID=SEQF3395.1|CP013237.1_285_cas;Genome_ID=SEQF3395.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.4e-51;Score=170.4;Coverage_Seq=0.9652173913043478;Coverage_Hmm=0.9827586206896551
SEQF3395.1|CP013237.1	CCTyper	CDS	285453	289490	1346	+	.	ID=SEQF3395.1|CP013237.1_283_cas;Genome_ID=SEQF3395.1;Feature_type=CDS;Product=Cas Prediction : Cas9_1_II;coding_strand=+;E-value=0.0;Score=1271.6;Coverage_Seq=0.9955423476968797;Coverage_Hmm=0.9991071428571429
SEQF3395.1|CP013237.1	CCTyper	CDS	293852	294136	95	+	.	ID=SEQF3395.1|CP013237.1_290_cas;Genome_ID=SEQF3395.1;Feature_type=CDS;Product=Cas Prediction : Csa5gr11_3_CAS-I-A;coding_strand=+;E-value=0.0002;Score=18.4;Coverage_Seq=0.6631578947368421;Coverage_Hmm=0.3888888888888889
SEQF3395.1|CP013237.1	CCTyper	CDS	290687	291349	221	+	.	ID=SEQF3395.1|CP013237.1_286_cas;Genome_ID=SEQF3395.1;Feature_type=CDS;Product=Cas Prediction : Csn2_1_CAS-II-A;coding_strand=+;E-value=2.8e-106;Score=350.8;Coverage_Seq=0.9819004524886877;Coverage_Hmm=0.9954128440366973