SEQF3405.1|NBFE01000021.1	CCTyper	repeat_region	1290	1783	494	+	.	ID=SEQF3405.1|NBFE01000021.1_1;Genome_ID=SEQF3405.1;Note=Predictor:CCtyper;Start:1290;End:1783;Consensus_Repeat:ATTTCAATCCACGCACCCGTGAAGGGTGCGAC;Number_of_Repeats:8;Repeat_Length:32;Average_Spacer_Length:34;Repeat_Identity:88.1;Spacer_Identity:42.2;Spacer_Length_Sem:0.4;Trusted:True;Cas_Type_Prediction: I-C;Cas_Subtype_Prediction:I-C;Subtype_Probability:0.991;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3405.1|NBFE01000021.1	CCTyper	direct_repeat	1290	1321	32	+	.	ID=SEQF3405.1|NBFE01000021.1_1_REPEAT1;Parent=SEQF3405.1|NBFE01000021.1_1;Note=AAAAAACAAACCCAACCTTTAAAGGGTGCGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3405.1|NBFE01000021.1	CCTyper	binding_site	1322	1356	35	+	.	ID=SEQF3405.1|NBFE01000021.1_1_SPACER1;Parent=SEQF3405.1|NBFE01000021.1_1;Note=AAAAACCAGAAGTGTTTATTTCAGGATTTTTTGAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3405.1|NBFE01000021.1	CCTyper	direct_repeat	1357	1388	32	+	.	ID=SEQF3405.1|NBFE01000021.1_1_REPEAT2;Parent=SEQF3405.1|NBFE01000021.1_1;Note=ATTTCAATCCACGCACCCGTGAAGGGTGCGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3405.1|NBFE01000021.1	CCTyper	binding_site	1389	1421	33	+	.	ID=SEQF3405.1|NBFE01000021.1_1_SPACER2;Parent=SEQF3405.1|NBFE01000021.1_1;Note=CTTTCTACCTCTCCTTCATATTCCAGCCATCTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3405.1|NBFE01000021.1	CCTyper	direct_repeat	1422	1453	32	+	.	ID=SEQF3405.1|NBFE01000021.1_1_REPEAT3;Parent=SEQF3405.1|NBFE01000021.1_1;Note=ATTTCAATCCACGCACCCGTGAAGGGTGCGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3405.1|NBFE01000021.1	CCTyper	binding_site	1454	1486	33	+	.	ID=SEQF3405.1|NBFE01000021.1_1_SPACER3;Parent=SEQF3405.1|NBFE01000021.1_1;Note=TCAATGATTACTGCTTGGTAATTCTTTTTCAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3405.1|NBFE01000021.1	CCTyper	direct_repeat	1487	1518	32	+	.	ID=SEQF3405.1|NBFE01000021.1_1_REPEAT4;Parent=SEQF3405.1|NBFE01000021.1_1;Note=ATTTCAATCCACGCACCCGTGAAGGGTGCGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3405.1|NBFE01000021.1	CCTyper	binding_site	1519	1553	35	+	.	ID=SEQF3405.1|NBFE01000021.1_1_SPACER4;Parent=SEQF3405.1|NBFE01000021.1_1;Note=TTGTTGTTGGGTTAGTTATGCTCTTTTCGAGCTCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3405.1|NBFE01000021.1	CCTyper	direct_repeat	1554	1585	32	+	.	ID=SEQF3405.1|NBFE01000021.1_1_REPEAT5;Parent=SEQF3405.1|NBFE01000021.1_1;Note=ATTTCAATCCACGCACCCGTGAAGGGTGCGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3405.1|NBFE01000021.1	CCTyper	binding_site	1586	1618	33	+	.	ID=SEQF3405.1|NBFE01000021.1_1_SPACER5;Parent=SEQF3405.1|NBFE01000021.1_1;Note=TTAGTGTTTATTACTGCAGTCAGTCGCACTGTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3405.1|NBFE01000021.1	CCTyper	direct_repeat	1619	1650	32	+	.	ID=SEQF3405.1|NBFE01000021.1_1_REPEAT6;Parent=SEQF3405.1|NBFE01000021.1_1;Note=ATTTCAATCCACGCACCCGTGAAGGGTGCGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3405.1|NBFE01000021.1	CCTyper	binding_site	1651	1685	35	+	.	ID=SEQF3405.1|NBFE01000021.1_1_SPACER6;Parent=SEQF3405.1|NBFE01000021.1_1;Note=TGATAAATCTTCTGATTGGATAGACATTTCAAATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3405.1|NBFE01000021.1	CCTyper	direct_repeat	1686	1717	32	+	.	ID=SEQF3405.1|NBFE01000021.1_1_REPEAT7;Parent=SEQF3405.1|NBFE01000021.1_1;Note=ATTTCAATCCACGCACCCGTGAAGGGTGCGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3405.1|NBFE01000021.1	CCTyper	binding_site	1718	1751	34	+	.	ID=SEQF3405.1|NBFE01000021.1_1_SPACER7;Parent=SEQF3405.1|NBFE01000021.1_1;Note=TGGGACAGGTCGAGATAATCAACTAACAAATGCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3405.1|NBFE01000021.1	CCTyper	direct_repeat	1752	1783	32	+	.	ID=SEQF3405.1|NBFE01000021.1_1_REPEAT8;Parent=SEQF3405.1|NBFE01000021.1_1;Note=ATTTCAATCCACGCACCCGTGAAGGGTGCGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3405.1|NBFE01000004.1	CCTyper	repeat_region	23019	23251	233	+	.	ID=SEQF3405.1|NBFE01000004.1_2;Genome_ID=SEQF3405.1;Note=Predictor:CCtyper;Start:23019;End:23251;Consensus_Repeat:TTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Number_of_Repeats:4;Repeat_Length:35;Average_Spacer_Length:31;Repeat_Identity:83.3;Spacer_Identity:43.1;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:II-C;Subtype_Probability:0.732;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3405.1|NBFE01000004.1	CCTyper	direct_repeat	23019	23053	35	+	.	ID=SEQF3405.1|NBFE01000004.1_2_REPEAT1;Parent=SEQF3405.1|NBFE01000004.1_2;Note=TTTTAGTAAATCAGTAACTAACATGGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3405.1|NBFE01000004.1	CCTyper	binding_site	23054	23084	31	+	.	ID=SEQF3405.1|NBFE01000004.1_2_SPACER1;Parent=SEQF3405.1|NBFE01000004.1_2;Note=ATGTGCCGCCTTTACGGATTATATATGCCGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3405.1|NBFE01000004.1	CCTyper	direct_repeat	23085	23119	35	+	.	ID=SEQF3405.1|NBFE01000004.1_2_REPEAT2;Parent=SEQF3405.1|NBFE01000004.1_2;Note=TTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3405.1|NBFE01000004.1	CCTyper	binding_site	23120	23150	31	+	.	ID=SEQF3405.1|NBFE01000004.1_2_SPACER2;Parent=SEQF3405.1|NBFE01000004.1_2;Note=AGCCTGTGTTACATGAGTTTGAATTAACAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3405.1|NBFE01000004.1	CCTyper	direct_repeat	23151	23185	35	+	.	ID=SEQF3405.1|NBFE01000004.1_2_REPEAT3;Parent=SEQF3405.1|NBFE01000004.1_2;Note=TTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3405.1|NBFE01000004.1	CCTyper	binding_site	23186	23216	31	+	.	ID=SEQF3405.1|NBFE01000004.1_2_SPACER3;Parent=SEQF3405.1|NBFE01000004.1_2;Note=CTCAAGATTATCGTCTTGAGCTGGCTTTTCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3405.1|NBFE01000004.1	CCTyper	direct_repeat	23217	23251	35	+	.	ID=SEQF3405.1|NBFE01000004.1_2_REPEAT4;Parent=SEQF3405.1|NBFE01000004.1_2;Note=TTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3405.1|NBFE01000004.1	CCTyper	OPERON	24088	29984	5897	-	.	ID=SEQF3405.1|NBFE01000004.1@2;Genome_ID=SEQF3405.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Csn2_1_CAS-II-A,Cas2_5_CAS-I-II-III-IV-V-VI,Cas1_4_CAS-I-II-III-IV-V-VI,Cas9_1_II;Positions=26,27,28,29;E-values=9.90e-107,1.40e-51,6.70e-103,0.00e+00;CoverageSeq=0.982,0.965,0.931,0.996;CoverageHMM=0.995,0.983,0.996,0.999;Strand_Interference=-1;Strand_Adaptation=-1
SEQF3405.1|NBFE01000021.1	CCTyper	OPERON	1931	11209	9279	-	.	ID=SEQF3405.1|NBFE01000021.1@1;Genome_ID=SEQF3405.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-C;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=I-C;Best_score=21.0;Genes=Cas2_4_CAS-I-II-III-IV-V-VI,Cas1_0_IC,Cas4_0_I-II,Cas7_0_IC,Cas8c_0_CAS-I-C,Cas5_0_IC,Cas3_1_CAS-I,WYL_3_CAS-I-II-III-IV-V-VI;Positions=1,2,4,5,6,7,8,9;E-values=2.00e-30,1.00e-109,2.00e-31,4.70e-124,1.90e-107,7.20e-92,3.40e-103,4.70e-14;CoverageSeq=0.929,0.955,0.844,0.969,0.933,0.81,0.895,0.517;CoverageHMM=0.978,0.747,0.983,0.996,0.96,0.995,0.958,0.884;Strand_Interference=-1;Strand_Adaptation=-1
SEQF3405.1|NBFE01000021.1	CCTyper	CDS	2235	3029	265	-	.	ID=SEQF3405.1|NBFE01000021.1_2_cas;Genome_ID=SEQF3405.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IC;coding_strand=-;E-value=1e-109;Score=363.5;Coverage_Seq=0.9547169811320755;Coverage_Hmm=0.7470588235294118
SEQF3405.1|NBFE01000004.1	CCTyper	CDS	25081	25947	289	-	.	ID=SEQF3405.1|NBFE01000004.1_28_cas;Genome_ID=SEQF3405.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=6.7e-103;Score=340.4;Coverage_Seq=0.9307958477508651;Coverage_Hmm=0.9963636363636363
SEQF3405.1|NBFE01000021.1	CCTyper	CDS	1931	2224	98	-	.	ID=SEQF3405.1|NBFE01000021.1_1_cas;Genome_ID=SEQF3405.1;Feature_type=CDS;Product=Cas Prediction : Cas2_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.9999999999999998e-30;Score=101.8;Coverage_Seq=0.9285714285714286;Coverage_Hmm=0.9775280898876404
SEQF3405.1|NBFE01000004.1	CCTyper	CDS	24740	25084	115	-	.	ID=SEQF3405.1|NBFE01000004.1_27_cas;Genome_ID=SEQF3405.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.4e-51;Score=170.4;Coverage_Seq=0.9652173913043478;Coverage_Hmm=0.9827586206896551
SEQF3405.1|NBFE01000021.1	CCTyper	CDS	7582	9984	801	-	.	ID=SEQF3405.1|NBFE01000021.1_8_cas;Genome_ID=SEQF3405.1;Feature_type=CDS;Product=Cas Prediction : Cas3_1_CAS-I;coding_strand=-;E-value=3.4e-103;Score=343.1;Coverage_Seq=0.8951310861423221;Coverage_Hmm=0.9583892617449664
SEQF3405.1|NBFE01000021.1	CCTyper	CDS	3255	3926	224	-	.	ID=SEQF3405.1|NBFE01000021.1_4_cas;Genome_ID=SEQF3405.1;Feature_type=CDS;Product=Cas Prediction : Cas4_0_I-II;coding_strand=-;E-value=2e-31;Score=105.9;Coverage_Seq=0.84375;Coverage_Hmm=0.9833333333333333
SEQF3405.1|NBFE01000021.1	CCTyper	CDS	6738	7481	248	-	.	ID=SEQF3405.1|NBFE01000021.1_7_cas;Genome_ID=SEQF3405.1;Feature_type=CDS;Product=Cas Prediction : Cas5_0_IC;coding_strand=-;E-value=7.2e-92;Score=303.8;Coverage_Seq=0.8104838709677419;Coverage_Hmm=0.9950738916256158
SEQF3405.1|NBFE01000021.1	CCTyper	CDS	3928	4803	292	-	.	ID=SEQF3405.1|NBFE01000021.1_5_cas;Genome_ID=SEQF3405.1;Feature_type=CDS;Product=Cas Prediction : Cas7_0_IC;coding_strand=-;E-value=4.7e-124;Score=410.1;Coverage_Seq=0.9691780821917808;Coverage_Hmm=0.9964788732394366
SEQF3405.1|NBFE01000021.1	CCTyper	CDS	4807	6738	644	-	.	ID=SEQF3405.1|NBFE01000021.1_6_cas;Genome_ID=SEQF3405.1;Feature_type=CDS;Product=Cas Prediction : Cas8c_0_CAS-I-C;coding_strand=-;E-value=1.8999999999999998e-107;Score=357.0;Coverage_Seq=0.9332298136645962;Coverage_Hmm=0.9600694444444444
SEQF3405.1|NBFE01000004.1	CCTyper	CDS	25947	29984	1346	-	.	ID=SEQF3405.1|NBFE01000004.1_29_cas;Genome_ID=SEQF3405.1;Feature_type=CDS;Product=Cas Prediction : Cas9_1_II;coding_strand=-;E-value=0.0;Score=1275.0;Coverage_Seq=0.9955423476968797;Coverage_Hmm=0.9991071428571429
SEQF3405.1|NBFE01000004.1	CCTyper	CDS	24088	24750	221	-	.	ID=SEQF3405.1|NBFE01000004.1_26_cas;Genome_ID=SEQF3405.1;Feature_type=CDS;Product=Cas Prediction : Csn2_1_CAS-II-A;coding_strand=-;E-value=9.9e-107;Score=352.3;Coverage_Seq=0.9819004524886877;Coverage_Hmm=0.9954128440366973
SEQF3405.1|NBFE01000021.1	CCTyper	CDS	10235	11209	325	-	.	ID=SEQF3405.1|NBFE01000021.1_9_cas;Genome_ID=SEQF3405.1;Feature_type=CDS;Product=Cas Prediction : WYL_3_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=4.7e-14;Score=49.6;Coverage_Seq=0.5169230769230769;Coverage_Hmm=0.8837209302325582