SEQF3407.1|NBFI01000006.1	CCTyper	repeat_region	23866	24165	300	+	.	ID=SEQF3407.1|NBFI01000006.1_1;Genome_ID=SEQF3407.1;Note=Predictor:CCtyper;Start:23866;End:24165;Consensus_Repeat:GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Number_of_Repeats:5;Repeat_Length:36;Average_Spacer_Length:30;Repeat_Identity:87.0;Spacer_Identity:42.5;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.549;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3407.1|NBFI01000006.1	CCTyper	direct_repeat	23866	23901	36	+	.	ID=SEQF3407.1|NBFI01000006.1_1_REPEAT1;Parent=SEQF3407.1|NBFI01000006.1_1;Note=GTTTTAGTAAATCAGTAACTAACATGGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3407.1|NBFI01000006.1	CCTyper	binding_site	23902	23931	30	+	.	ID=SEQF3407.1|NBFI01000006.1_1_SPACER1;Parent=SEQF3407.1|NBFI01000006.1_1;Note=ACTTGCGCTGAAAGGTGCTGTGTTGCTAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3407.1|NBFI01000006.1	CCTyper	direct_repeat	23932	23967	36	+	.	ID=SEQF3407.1|NBFI01000006.1_1_REPEAT2;Parent=SEQF3407.1|NBFI01000006.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3407.1|NBFI01000006.1	CCTyper	binding_site	23968	23997	30	+	.	ID=SEQF3407.1|NBFI01000006.1_1_SPACER2;Parent=SEQF3407.1|NBFI01000006.1_1;Note=AGCATTTACTTCTTGAGTTCCAGATACTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3407.1|NBFI01000006.1	CCTyper	direct_repeat	23998	24033	36	+	.	ID=SEQF3407.1|NBFI01000006.1_1_REPEAT3;Parent=SEQF3407.1|NBFI01000006.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3407.1|NBFI01000006.1	CCTyper	binding_site	24034	24063	30	+	.	ID=SEQF3407.1|NBFI01000006.1_1_SPACER3;Parent=SEQF3407.1|NBFI01000006.1_1;Note=TCGAGCTTTTGCAAATCTGTTAAGTAATTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3407.1|NBFI01000006.1	CCTyper	direct_repeat	24064	24099	36	+	.	ID=SEQF3407.1|NBFI01000006.1_1_REPEAT4;Parent=SEQF3407.1|NBFI01000006.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3407.1|NBFI01000006.1	CCTyper	binding_site	24100	24129	30	+	.	ID=SEQF3407.1|NBFI01000006.1_1_SPACER4;Parent=SEQF3407.1|NBFI01000006.1_1;Note=AGTACATTTCTTCCAAGAAAAAACTTAAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3407.1|NBFI01000006.1	CCTyper	direct_repeat	24130	24165	36	+	.	ID=SEQF3407.1|NBFI01000006.1_1_REPEAT5;Parent=SEQF3407.1|NBFI01000006.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3407.1|NBFI01000006.1	CCTyper	repeat_region	24247	25404	1158	+	.	ID=SEQF3407.1|NBFI01000006.1_2;Genome_ID=SEQF3407.1;Note=Predictor:CCtyper;Start:24247;End:25404;Consensus_Repeat:GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Number_of_Repeats:18;Repeat_Length:36;Average_Spacer_Length:30;Repeat_Identity:100.0;Spacer_Identity:42.0;Spacer_Length_Sem:0.1;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.549;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3407.1|NBFI01000006.1	CCTyper	direct_repeat	24247	24282	36	+	.	ID=SEQF3407.1|NBFI01000006.1_2_REPEAT1;Parent=SEQF3407.1|NBFI01000006.1_2;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3407.1|NBFI01000006.1	CCTyper	binding_site	24283	24312	30	+	.	ID=SEQF3407.1|NBFI01000006.1_2_SPACER1;Parent=SEQF3407.1|NBFI01000006.1_2;Note=ATTTCAGTATCAATTAAGAATTGCTTGTGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3407.1|NBFI01000006.1	CCTyper	direct_repeat	24313	24348	36	+	.	ID=SEQF3407.1|NBFI01000006.1_2_REPEAT2;Parent=SEQF3407.1|NBFI01000006.1_2;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3407.1|NBFI01000006.1	CCTyper	binding_site	24349	24378	30	+	.	ID=SEQF3407.1|NBFI01000006.1_2_SPACER2;Parent=SEQF3407.1|NBFI01000006.1_2;Note=TTATCTTTAGCCATTTGAGTGATGGTTGCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3407.1|NBFI01000006.1	CCTyper	direct_repeat	24379	24414	36	+	.	ID=SEQF3407.1|NBFI01000006.1_2_REPEAT3;Parent=SEQF3407.1|NBFI01000006.1_2;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3407.1|NBFI01000006.1	CCTyper	binding_site	24415	24445	31	+	.	ID=SEQF3407.1|NBFI01000006.1_2_SPACER3;Parent=SEQF3407.1|NBFI01000006.1_2;Note=CTGTATGGTCAATATTCCCAAGTATTGACGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3407.1|NBFI01000006.1	CCTyper	direct_repeat	24446	24481	36	+	.	ID=SEQF3407.1|NBFI01000006.1_2_REPEAT4;Parent=SEQF3407.1|NBFI01000006.1_2;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3407.1|NBFI01000006.1	CCTyper	binding_site	24482	24511	30	+	.	ID=SEQF3407.1|NBFI01000006.1_2_SPACER4;Parent=SEQF3407.1|NBFI01000006.1_2;Note=GGACGCGCGCGTTTTTGATAGCAAGCTAGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3407.1|NBFI01000006.1	CCTyper	direct_repeat	24512	24547	36	+	.	ID=SEQF3407.1|NBFI01000006.1_2_REPEAT5;Parent=SEQF3407.1|NBFI01000006.1_2;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3407.1|NBFI01000006.1	CCTyper	binding_site	24548	24577	30	+	.	ID=SEQF3407.1|NBFI01000006.1_2_SPACER5;Parent=SEQF3407.1|NBFI01000006.1_2;Note=TGAGCATTCAGCACGCCAAATTTTCATTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3407.1|NBFI01000006.1	CCTyper	direct_repeat	24578	24613	36	+	.	ID=SEQF3407.1|NBFI01000006.1_2_REPEAT6;Parent=SEQF3407.1|NBFI01000006.1_2;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3407.1|NBFI01000006.1	CCTyper	binding_site	24614	24643	30	+	.	ID=SEQF3407.1|NBFI01000006.1_2_SPACER6;Parent=SEQF3407.1|NBFI01000006.1_2;Note=CAATCTTGACACAGACGACTATCAGCGTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3407.1|NBFI01000006.1	CCTyper	direct_repeat	24644	24679	36	+	.	ID=SEQF3407.1|NBFI01000006.1_2_REPEAT7;Parent=SEQF3407.1|NBFI01000006.1_2;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3407.1|NBFI01000006.1	CCTyper	binding_site	24680	24709	30	+	.	ID=SEQF3407.1|NBFI01000006.1_2_SPACER7;Parent=SEQF3407.1|NBFI01000006.1_2;Note=ACCTCTGCATTGACCAAAGCCTTTTTTAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3407.1|NBFI01000006.1	CCTyper	direct_repeat	24710	24745	36	+	.	ID=SEQF3407.1|NBFI01000006.1_2_REPEAT8;Parent=SEQF3407.1|NBFI01000006.1_2;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3407.1|NBFI01000006.1	CCTyper	binding_site	24746	24774	29	+	.	ID=SEQF3407.1|NBFI01000006.1_2_SPACER8;Parent=SEQF3407.1|NBFI01000006.1_2;Note=GGGGGTCTCAAAATATTTTTTAAAAAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3407.1|NBFI01000006.1	CCTyper	direct_repeat	24775	24810	36	+	.	ID=SEQF3407.1|NBFI01000006.1_2_REPEAT9;Parent=SEQF3407.1|NBFI01000006.1_2;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3407.1|NBFI01000006.1	CCTyper	binding_site	24811	24840	30	+	.	ID=SEQF3407.1|NBFI01000006.1_2_SPACER9;Parent=SEQF3407.1|NBFI01000006.1_2;Note=CTTTCAACTTAAAACTTAATTCATCTGCTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3407.1|NBFI01000006.1	CCTyper	direct_repeat	24841	24876	36	+	.	ID=SEQF3407.1|NBFI01000006.1_2_REPEAT10;Parent=SEQF3407.1|NBFI01000006.1_2;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3407.1|NBFI01000006.1	CCTyper	binding_site	24877	24906	30	+	.	ID=SEQF3407.1|NBFI01000006.1_2_SPACER10;Parent=SEQF3407.1|NBFI01000006.1_2;Note=GAAAAAGTTGATGATTTGAGGCATGTTTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3407.1|NBFI01000006.1	CCTyper	direct_repeat	24907	24942	36	+	.	ID=SEQF3407.1|NBFI01000006.1_2_REPEAT11;Parent=SEQF3407.1|NBFI01000006.1_2;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3407.1|NBFI01000006.1	CCTyper	binding_site	24943	24972	30	+	.	ID=SEQF3407.1|NBFI01000006.1_2_SPACER11;Parent=SEQF3407.1|NBFI01000006.1_2;Note=ATTTCTGCGTCGTTTAATAGCCACTTGTAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3407.1|NBFI01000006.1	CCTyper	direct_repeat	24973	25008	36	+	.	ID=SEQF3407.1|NBFI01000006.1_2_REPEAT12;Parent=SEQF3407.1|NBFI01000006.1_2;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3407.1|NBFI01000006.1	CCTyper	binding_site	25009	25038	30	+	.	ID=SEQF3407.1|NBFI01000006.1_2_SPACER12;Parent=SEQF3407.1|NBFI01000006.1_2;Note=GTGTTAGAGTTAGTGTTATCACTGGATAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3407.1|NBFI01000006.1	CCTyper	direct_repeat	25039	25074	36	+	.	ID=SEQF3407.1|NBFI01000006.1_2_REPEAT13;Parent=SEQF3407.1|NBFI01000006.1_2;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3407.1|NBFI01000006.1	CCTyper	binding_site	25075	25104	30	+	.	ID=SEQF3407.1|NBFI01000006.1_2_SPACER13;Parent=SEQF3407.1|NBFI01000006.1_2;Note=GAAGCATATGGCATAGCTTGACCAAACAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3407.1|NBFI01000006.1	CCTyper	direct_repeat	25105	25140	36	+	.	ID=SEQF3407.1|NBFI01000006.1_2_REPEAT14;Parent=SEQF3407.1|NBFI01000006.1_2;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3407.1|NBFI01000006.1	CCTyper	binding_site	25141	25170	30	+	.	ID=SEQF3407.1|NBFI01000006.1_2_SPACER14;Parent=SEQF3407.1|NBFI01000006.1_2;Note=TGGAACAGCCAAAACTGCACGCGCTAAGAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3407.1|NBFI01000006.1	CCTyper	direct_repeat	25171	25206	36	+	.	ID=SEQF3407.1|NBFI01000006.1_2_REPEAT15;Parent=SEQF3407.1|NBFI01000006.1_2;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3407.1|NBFI01000006.1	CCTyper	binding_site	25207	25236	30	+	.	ID=SEQF3407.1|NBFI01000006.1_2_SPACER15;Parent=SEQF3407.1|NBFI01000006.1_2;Note=ACGGCTTGCAAAGTCTCTTTATGTTTACTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3407.1|NBFI01000006.1	CCTyper	direct_repeat	25237	25272	36	+	.	ID=SEQF3407.1|NBFI01000006.1_2_REPEAT16;Parent=SEQF3407.1|NBFI01000006.1_2;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3407.1|NBFI01000006.1	CCTyper	binding_site	25273	25302	30	+	.	ID=SEQF3407.1|NBFI01000006.1_2_SPACER16;Parent=SEQF3407.1|NBFI01000006.1_2;Note=ACAACTATTACAGTTGTTATTGTTAATGTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3407.1|NBFI01000006.1	CCTyper	direct_repeat	25303	25338	36	+	.	ID=SEQF3407.1|NBFI01000006.1_2_REPEAT17;Parent=SEQF3407.1|NBFI01000006.1_2;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3407.1|NBFI01000006.1	CCTyper	binding_site	25339	25368	30	+	.	ID=SEQF3407.1|NBFI01000006.1_2_SPACER17;Parent=SEQF3407.1|NBFI01000006.1_2;Note=CGGAACATATAGAGAAGATATCCTTTTTAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3407.1|NBFI01000006.1	CCTyper	direct_repeat	25369	25404	36	+	.	ID=SEQF3407.1|NBFI01000006.1_2_REPEAT18;Parent=SEQF3407.1|NBFI01000006.1_2;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3407.1|NBFI01000006.1	CCTyper	OPERON	22282	32137	9856	-	.	ID=SEQF3407.1|NBFI01000006.1@1;Genome_ID=SEQF3407.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Csa5gr11_3_CAS-I-A,Csn2_1_CAS-II-A,Cas2_5_CAS-I-II-III-IV-V-VI,Cas1_4_CAS-I-II-III-IV-V-VI,Cas9_1_II;Positions=22,26,27,28,29;E-values=2.10e-04,2.90e-106,1.40e-51,1.50e-103,0.00e+00;CoverageSeq=0.663,0.982,0.965,0.931,0.996;CoverageHMM=0.389,0.995,0.983,0.996,0.999;Strand_Interference=-1;Strand_Adaptation=-1
SEQF3407.1|NBFI01000006.1	CCTyper	CDS	27234	28100	289	-	.	ID=SEQF3407.1|NBFI01000006.1_28_cas;Genome_ID=SEQF3407.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.5e-103;Score=342.6;Coverage_Seq=0.9307958477508651;Coverage_Hmm=0.9963636363636363
SEQF3407.1|NBFI01000006.1	CCTyper	CDS	26893	27237	115	-	.	ID=SEQF3407.1|NBFI01000006.1_27_cas;Genome_ID=SEQF3407.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.4e-51;Score=170.4;Coverage_Seq=0.9652173913043478;Coverage_Hmm=0.9827586206896551
SEQF3407.1|NBFI01000006.1	CCTyper	CDS	28100	32137	1346	-	.	ID=SEQF3407.1|NBFI01000006.1_29_cas;Genome_ID=SEQF3407.1;Feature_type=CDS;Product=Cas Prediction : Cas9_1_II;coding_strand=-;E-value=0.0;Score=1276.2;Coverage_Seq=0.9955423476968797;Coverage_Hmm=0.9991071428571429
SEQF3407.1|NBFI01000006.1	CCTyper	CDS	22282	22566	95	-	.	ID=SEQF3407.1|NBFI01000006.1_22_cas;Genome_ID=SEQF3407.1;Feature_type=CDS;Product=Cas Prediction : Csa5gr11_3_CAS-I-A;coding_strand=-;E-value=0.00021;Score=18.4;Coverage_Seq=0.6631578947368421;Coverage_Hmm=0.3888888888888889
SEQF3407.1|NBFI01000006.1	CCTyper	CDS	26241	26903	221	-	.	ID=SEQF3407.1|NBFI01000006.1_26_cas;Genome_ID=SEQF3407.1;Feature_type=CDS;Product=Cas Prediction : Csn2_1_CAS-II-A;coding_strand=-;E-value=2.9e-106;Score=350.8;Coverage_Seq=0.9819004524886877;Coverage_Hmm=0.9954128440366973