SEQF3421.1|CP044221.1	CCTyper	repeat_region	1990202	1991294	1093	+	.	ID=SEQF3421.1|CP044221.1_1;Genome_ID=SEQF3421.1;Note=Predictor:CCtyper;Start:1990202;End:1991294;Consensus_Repeat:GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Number_of_Repeats:17;Repeat_Length:36;Average_Spacer_Length:30.1;Repeat_Identity:100.0;Spacer_Identity:43.1;Spacer_Length_Sem:0.1;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.549;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3421.1|CP044221.1	CCTyper	direct_repeat	1990202	1990237	36	+	.	ID=SEQF3421.1|CP044221.1_1_REPEAT1;Parent=SEQF3421.1|CP044221.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3421.1|CP044221.1	CCTyper	binding_site	1990238	1990267	30	+	.	ID=SEQF3421.1|CP044221.1_1_SPACER1;Parent=SEQF3421.1|CP044221.1_1;Note=GTCGGCCATAAACAGTATCTAATGCATATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3421.1|CP044221.1	CCTyper	direct_repeat	1990268	1990303	36	+	.	ID=SEQF3421.1|CP044221.1_1_REPEAT2;Parent=SEQF3421.1|CP044221.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3421.1|CP044221.1	CCTyper	binding_site	1990304	1990333	30	+	.	ID=SEQF3421.1|CP044221.1_1_SPACER2;Parent=SEQF3421.1|CP044221.1_1;Note=ATCAACGCTTGCAAAAGTTTCTTGCTGCAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3421.1|CP044221.1	CCTyper	direct_repeat	1990334	1990369	36	+	.	ID=SEQF3421.1|CP044221.1_1_REPEAT3;Parent=SEQF3421.1|CP044221.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3421.1|CP044221.1	CCTyper	binding_site	1990370	1990399	30	+	.	ID=SEQF3421.1|CP044221.1_1_SPACER3;Parent=SEQF3421.1|CP044221.1_1;Note=CAGCGTATGATTTTGATTTTAGCTAACTGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3421.1|CP044221.1	CCTyper	direct_repeat	1990400	1990435	36	+	.	ID=SEQF3421.1|CP044221.1_1_REPEAT4;Parent=SEQF3421.1|CP044221.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3421.1|CP044221.1	CCTyper	binding_site	1990436	1990465	30	+	.	ID=SEQF3421.1|CP044221.1_1_SPACER4;Parent=SEQF3421.1|CP044221.1_1;Note=GTGTCTGATAACAACAACCCCGCTTTCAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3421.1|CP044221.1	CCTyper	direct_repeat	1990466	1990501	36	+	.	ID=SEQF3421.1|CP044221.1_1_REPEAT5;Parent=SEQF3421.1|CP044221.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3421.1|CP044221.1	CCTyper	binding_site	1990502	1990531	30	+	.	ID=SEQF3421.1|CP044221.1_1_SPACER5;Parent=SEQF3421.1|CP044221.1_1;Note=TCCTGCTTATGTAGTCGAAGACCGTTTGGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3421.1|CP044221.1	CCTyper	direct_repeat	1990532	1990567	36	+	.	ID=SEQF3421.1|CP044221.1_1_REPEAT6;Parent=SEQF3421.1|CP044221.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3421.1|CP044221.1	CCTyper	binding_site	1990568	1990597	30	+	.	ID=SEQF3421.1|CP044221.1_1_SPACER6;Parent=SEQF3421.1|CP044221.1_1;Note=AAGTGATATTAAAAAAGAATTAGAAGGATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3421.1|CP044221.1	CCTyper	direct_repeat	1990598	1990633	36	+	.	ID=SEQF3421.1|CP044221.1_1_REPEAT7;Parent=SEQF3421.1|CP044221.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3421.1|CP044221.1	CCTyper	binding_site	1990634	1990664	31	+	.	ID=SEQF3421.1|CP044221.1_1_SPACER7;Parent=SEQF3421.1|CP044221.1_1;Note=CAAGCCTTCATCATCCGCTCCCATGGATAGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3421.1|CP044221.1	CCTyper	direct_repeat	1990665	1990700	36	+	.	ID=SEQF3421.1|CP044221.1_1_REPEAT8;Parent=SEQF3421.1|CP044221.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3421.1|CP044221.1	CCTyper	binding_site	1990701	1990730	30	+	.	ID=SEQF3421.1|CP044221.1_1_SPACER8;Parent=SEQF3421.1|CP044221.1_1;Note=GTGTTTTCTTAAGCGGAGTCAAGAAGTCGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3421.1|CP044221.1	CCTyper	direct_repeat	1990731	1990766	36	+	.	ID=SEQF3421.1|CP044221.1_1_REPEAT9;Parent=SEQF3421.1|CP044221.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3421.1|CP044221.1	CCTyper	binding_site	1990767	1990796	30	+	.	ID=SEQF3421.1|CP044221.1_1_SPACER9;Parent=SEQF3421.1|CP044221.1_1;Note=CTATATATTACAGTTATAGACCATTTACGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3421.1|CP044221.1	CCTyper	direct_repeat	1990797	1990832	36	+	.	ID=SEQF3421.1|CP044221.1_1_REPEAT10;Parent=SEQF3421.1|CP044221.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3421.1|CP044221.1	CCTyper	binding_site	1990833	1990862	30	+	.	ID=SEQF3421.1|CP044221.1_1_SPACER10;Parent=SEQF3421.1|CP044221.1_1;Note=CATCTTGATAAATCGTTCTTTGAAAACGGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3421.1|CP044221.1	CCTyper	direct_repeat	1990863	1990898	36	+	.	ID=SEQF3421.1|CP044221.1_1_REPEAT11;Parent=SEQF3421.1|CP044221.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3421.1|CP044221.1	CCTyper	binding_site	1990899	1990928	30	+	.	ID=SEQF3421.1|CP044221.1_1_SPACER11;Parent=SEQF3421.1|CP044221.1_1;Note=TGTCTTATCGGTATTTTCTTGAATTTCTCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3421.1|CP044221.1	CCTyper	direct_repeat	1990929	1990964	36	+	.	ID=SEQF3421.1|CP044221.1_1_REPEAT12;Parent=SEQF3421.1|CP044221.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3421.1|CP044221.1	CCTyper	binding_site	1990965	1990994	30	+	.	ID=SEQF3421.1|CP044221.1_1_SPACER12;Parent=SEQF3421.1|CP044221.1_1;Note=CAGACCGTGTCAACTGCGAACAGTTGCCGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3421.1|CP044221.1	CCTyper	direct_repeat	1990995	1991030	36	+	.	ID=SEQF3421.1|CP044221.1_1_REPEAT13;Parent=SEQF3421.1|CP044221.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3421.1|CP044221.1	CCTyper	binding_site	1991031	1991060	30	+	.	ID=SEQF3421.1|CP044221.1_1_SPACER13;Parent=SEQF3421.1|CP044221.1_1;Note=AAACACCTGAATCAGAAGATGCCGAATAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3421.1|CP044221.1	CCTyper	direct_repeat	1991061	1991096	36	+	.	ID=SEQF3421.1|CP044221.1_1_REPEAT14;Parent=SEQF3421.1|CP044221.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3421.1|CP044221.1	CCTyper	binding_site	1991097	1991126	30	+	.	ID=SEQF3421.1|CP044221.1_1_SPACER14;Parent=SEQF3421.1|CP044221.1_1;Note=GGAACAGTTTACGGCTATTTCAAGCGCGGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3421.1|CP044221.1	CCTyper	direct_repeat	1991127	1991162	36	+	.	ID=SEQF3421.1|CP044221.1_1_REPEAT15;Parent=SEQF3421.1|CP044221.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3421.1|CP044221.1	CCTyper	binding_site	1991163	1991192	30	+	.	ID=SEQF3421.1|CP044221.1_1_SPACER15;Parent=SEQF3421.1|CP044221.1_1;Note=GCAGCGCCCCATTGATTACCATTTCCTAGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3421.1|CP044221.1	CCTyper	direct_repeat	1991193	1991228	36	+	.	ID=SEQF3421.1|CP044221.1_1_REPEAT16;Parent=SEQF3421.1|CP044221.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3421.1|CP044221.1	CCTyper	binding_site	1991229	1991258	30	+	.	ID=SEQF3421.1|CP044221.1_1_SPACER16;Parent=SEQF3421.1|CP044221.1_1;Note=ACTAGCAACACAGCACCTTTCAGCGCAAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3421.1|CP044221.1	CCTyper	direct_repeat	1991259	1991294	36	+	.	ID=SEQF3421.1|CP044221.1_1_REPEAT17;Parent=SEQF3421.1|CP044221.1_1;Note=GTTTTAGAGCCATGTTAGTTACTGATTTACTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3421.1|CP044221.1	CCTyper	OPERON	1983469	1992878	9410	+	.	ID=SEQF3421.1|CP044221.1@53;Genome_ID=SEQF3421.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Cas9_1_II,Cas1_4_CAS-I-II-III-IV-V-VI,Cas2_5_CAS-I-II-III-IV-V-VI,Csn2_1_CAS-II-A,Csa5gr11_3_CAS-I-A;Positions=1846,1847,1848,1849,1853;E-values=0.00e+00,1.50e-103,1.40e-51,2.90e-106,2.10e-04;CoverageSeq=0.996,0.931,0.965,0.982,0.663;CoverageHMM=0.999,0.996,0.983,0.995,0.389;Strand_Interference=1;Strand_Adaptation=1
SEQF3421.1|CP044221.1	CCTyper	CDS	1987506	1988372	289	+	.	ID=SEQF3421.1|CP044221.1_1847_cas;Genome_ID=SEQF3421.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.5e-103;Score=342.6;Coverage_Seq=0.9307958477508651;Coverage_Hmm=0.9963636363636363
SEQF3421.1|CP044221.1	CCTyper	CDS	1988369	1988713	115	+	.	ID=SEQF3421.1|CP044221.1_1848_cas;Genome_ID=SEQF3421.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.4e-51;Score=170.4;Coverage_Seq=0.9652173913043478;Coverage_Hmm=0.9827586206896551
SEQF3421.1|CP044221.1	CCTyper	CDS	1983469	1987506	1346	+	.	ID=SEQF3421.1|CP044221.1_1846_cas;Genome_ID=SEQF3421.1;Feature_type=CDS;Product=Cas Prediction : Cas9_1_II;coding_strand=+;E-value=0.0;Score=1276.2;Coverage_Seq=0.9955423476968797;Coverage_Hmm=0.9991071428571429
SEQF3421.1|CP044221.1	CCTyper	CDS	1992594	1992878	95	+	.	ID=SEQF3421.1|CP044221.1_1853_cas;Genome_ID=SEQF3421.1;Feature_type=CDS;Product=Cas Prediction : Csa5gr11_3_CAS-I-A;coding_strand=+;E-value=0.00021;Score=18.4;Coverage_Seq=0.6631578947368421;Coverage_Hmm=0.3888888888888889
SEQF3421.1|CP044221.1	CCTyper	CDS	1988703	1989365	221	+	.	ID=SEQF3421.1|CP044221.1_1849_cas;Genome_ID=SEQF3421.1;Feature_type=CDS;Product=Cas Prediction : Csn2_1_CAS-II-A;coding_strand=+;E-value=2.9e-106;Score=350.8;Coverage_Seq=0.9819004524886877;Coverage_Hmm=0.9954128440366973