SEQF3441.1|QYBL01000001.1	CCTyper	repeat_region	81529	82289	761	+	.	ID=SEQF3441.1|QYBL01000001.1_1;Genome_ID=SEQF3441.1;Note=Predictor:CCtyper;Start:81529;End:82289;Consensus_Repeat:ATTTTACCCGCACGAGCGGGGGTGATCC;Number_of_Repeats:13;Repeat_Length:28;Average_Spacer_Length:33.1;Repeat_Identity:100.0;Spacer_Identity:43.1;Spacer_Length_Sem:0.1;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:I-E;Subtype_Probability:0.261;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3441.1|QYBL01000001.1	CCTyper	direct_repeat	81529	81556	28	+	.	ID=SEQF3441.1|QYBL01000001.1_1_REPEAT1;Parent=SEQF3441.1|QYBL01000001.1_1;Note=ATTTTACCCGCACGAGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3441.1|QYBL01000001.1	CCTyper	binding_site	81557	81590	34	+	.	ID=SEQF3441.1|QYBL01000001.1_1_SPACER1;Parent=SEQF3441.1|QYBL01000001.1_1;Note=GTAGGAACGGCCAGCGGTTTTGGTTATATTGATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3441.1|QYBL01000001.1	CCTyper	direct_repeat	81591	81618	28	+	.	ID=SEQF3441.1|QYBL01000001.1_1_REPEAT2;Parent=SEQF3441.1|QYBL01000001.1_1;Note=ATTTTACCCGCACGAGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3441.1|QYBL01000001.1	CCTyper	binding_site	81619	81651	33	+	.	ID=SEQF3441.1|QYBL01000001.1_1_SPACER2;Parent=SEQF3441.1|QYBL01000001.1_1;Note=TGATAGCTTCTTCTCTTGACCAATTATCAAAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3441.1|QYBL01000001.1	CCTyper	direct_repeat	81652	81679	28	+	.	ID=SEQF3441.1|QYBL01000001.1_1_REPEAT3;Parent=SEQF3441.1|QYBL01000001.1_1;Note=ATTTTACCCGCACGAGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3441.1|QYBL01000001.1	CCTyper	binding_site	81680	81712	33	+	.	ID=SEQF3441.1|QYBL01000001.1_1_SPACER3;Parent=SEQF3441.1|QYBL01000001.1_1;Note=TGAACAGCACGCGCCAATTCATCAGGTCTTTCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3441.1|QYBL01000001.1	CCTyper	direct_repeat	81713	81740	28	+	.	ID=SEQF3441.1|QYBL01000001.1_1_REPEAT4;Parent=SEQF3441.1|QYBL01000001.1_1;Note=ATTTTACCCGCACGAGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3441.1|QYBL01000001.1	CCTyper	binding_site	81741	81773	33	+	.	ID=SEQF3441.1|QYBL01000001.1_1_SPACER4;Parent=SEQF3441.1|QYBL01000001.1_1;Note=TATTTTGCATATTTTTGTTCCATCTTCTGAACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3441.1|QYBL01000001.1	CCTyper	direct_repeat	81774	81801	28	+	.	ID=SEQF3441.1|QYBL01000001.1_1_REPEAT5;Parent=SEQF3441.1|QYBL01000001.1_1;Note=ATTTTACCCGCACGAGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3441.1|QYBL01000001.1	CCTyper	binding_site	81802	81834	33	+	.	ID=SEQF3441.1|QYBL01000001.1_1_SPACER5;Parent=SEQF3441.1|QYBL01000001.1_1;Note=TACCAAGAAATATGGCCTCGTTTGGGAAGAACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3441.1|QYBL01000001.1	CCTyper	direct_repeat	81835	81862	28	+	.	ID=SEQF3441.1|QYBL01000001.1_1_REPEAT6;Parent=SEQF3441.1|QYBL01000001.1_1;Note=ATTTTACCCGCACGAGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3441.1|QYBL01000001.1	CCTyper	binding_site	81863	81895	33	+	.	ID=SEQF3441.1|QYBL01000001.1_1_SPACER6;Parent=SEQF3441.1|QYBL01000001.1_1;Note=CGCAGAACAAGCTTTAAAGTTTTTCGGGATTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3441.1|QYBL01000001.1	CCTyper	direct_repeat	81896	81923	28	+	.	ID=SEQF3441.1|QYBL01000001.1_1_REPEAT7;Parent=SEQF3441.1|QYBL01000001.1_1;Note=ATTTTACCCGCACGAGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3441.1|QYBL01000001.1	CCTyper	binding_site	81924	81956	33	+	.	ID=SEQF3441.1|QYBL01000001.1_1_SPACER7;Parent=SEQF3441.1|QYBL01000001.1_1;Note=TACCACGATACATGGGTCGATAAATTGGGGATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3441.1|QYBL01000001.1	CCTyper	direct_repeat	81957	81984	28	+	.	ID=SEQF3441.1|QYBL01000001.1_1_REPEAT8;Parent=SEQF3441.1|QYBL01000001.1_1;Note=ATTTTACCCGCACGAGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3441.1|QYBL01000001.1	CCTyper	binding_site	81985	82017	33	+	.	ID=SEQF3441.1|QYBL01000001.1_1_SPACER8;Parent=SEQF3441.1|QYBL01000001.1_1;Note=CGGTTGGATATTCTTTCAAAATCTCGTTAGATG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3441.1|QYBL01000001.1	CCTyper	direct_repeat	82018	82045	28	+	.	ID=SEQF3441.1|QYBL01000001.1_1_REPEAT9;Parent=SEQF3441.1|QYBL01000001.1_1;Note=ATTTTACCCGCACGAGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3441.1|QYBL01000001.1	CCTyper	binding_site	82046	82078	33	+	.	ID=SEQF3441.1|QYBL01000001.1_1_SPACER9;Parent=SEQF3441.1|QYBL01000001.1_1;Note=TCAGTGAAAGCACAAAAGCTATGCTGATGGAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3441.1|QYBL01000001.1	CCTyper	direct_repeat	82079	82106	28	+	.	ID=SEQF3441.1|QYBL01000001.1_1_REPEAT10;Parent=SEQF3441.1|QYBL01000001.1_1;Note=ATTTTACCCGCACGAGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3441.1|QYBL01000001.1	CCTyper	binding_site	82107	82139	33	+	.	ID=SEQF3441.1|QYBL01000001.1_1_SPACER10;Parent=SEQF3441.1|QYBL01000001.1_1;Note=TGGAAGGTCGTTAAAGTTAAAGCTGATTTGTGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3441.1|QYBL01000001.1	CCTyper	direct_repeat	82140	82167	28	+	.	ID=SEQF3441.1|QYBL01000001.1_1_REPEAT11;Parent=SEQF3441.1|QYBL01000001.1_1;Note=ATTTTACCCGCACGAGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3441.1|QYBL01000001.1	CCTyper	binding_site	82168	82200	33	+	.	ID=SEQF3441.1|QYBL01000001.1_1_SPACER11;Parent=SEQF3441.1|QYBL01000001.1_1;Note=TAAAATCTAGTTCAATTGCTAAACCGTTTATAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3441.1|QYBL01000001.1	CCTyper	direct_repeat	82201	82228	28	+	.	ID=SEQF3441.1|QYBL01000001.1_1_REPEAT12;Parent=SEQF3441.1|QYBL01000001.1_1;Note=ATTTTACCCGCACGAGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3441.1|QYBL01000001.1	CCTyper	binding_site	82229	82261	33	+	.	ID=SEQF3441.1|QYBL01000001.1_1_SPACER12;Parent=SEQF3441.1|QYBL01000001.1_1;Note=TGAGTTTCTAGAAATTCTATAGCGTCTCTCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3441.1|QYBL01000001.1	CCTyper	direct_repeat	82262	82289	28	+	.	ID=SEQF3441.1|QYBL01000001.1_1_REPEAT13;Parent=SEQF3441.1|QYBL01000001.1_1;Note=ATTTTACCCGCACGAGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3441.1|QYBL01000001.1	CCTyper	repeat_region	183856	184092	237	+	.	ID=SEQF3441.1|QYBL01000001.1_2;Genome_ID=SEQF3441.1;Note=Predictor:CCtyper;Start:183856;End:184092;Consensus_Repeat:ATGTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Number_of_Repeats:4;Repeat_Length:38;Average_Spacer_Length:28.3;Repeat_Identity:77.7;Spacer_Identity:38.2;Spacer_Length_Sem:0.3;Trusted:True;Cas_Type_Prediction: II-C;Cas_Subtype_Prediction:II-C;Subtype_Probability:0.897;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3441.1|QYBL01000001.1	CCTyper	direct_repeat	183856	183893	38	+	.	ID=SEQF3441.1|QYBL01000001.1_2_REPEAT1;Parent=SEQF3441.1|QYBL01000001.1_2;Note=AGGTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3441.1|QYBL01000001.1	CCTyper	binding_site	183894	183921	28	+	.	ID=SEQF3441.1|QYBL01000001.1_2_SPACER1;Parent=SEQF3441.1|QYBL01000001.1_2;Note=AACTACATGGGCATTGATGAATGTGTCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3441.1|QYBL01000001.1	CCTyper	direct_repeat	183922	183959	38	+	.	ID=SEQF3441.1|QYBL01000001.1_2_REPEAT2;Parent=SEQF3441.1|QYBL01000001.1_2;Note=ATGTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3441.1|QYBL01000001.1	CCTyper	binding_site	183960	183988	29	+	.	ID=SEQF3441.1|QYBL01000001.1_2_SPACER2;Parent=SEQF3441.1|QYBL01000001.1_2;Note=TTATTTGCGTCCTGAAGTACCAGCCACGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3441.1|QYBL01000001.1	CCTyper	direct_repeat	183989	184026	38	+	.	ID=SEQF3441.1|QYBL01000001.1_2_REPEAT3;Parent=SEQF3441.1|QYBL01000001.1_2;Note=TTGTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3441.1|QYBL01000001.1	CCTyper	binding_site	184027	184054	28	+	.	ID=SEQF3441.1|QYBL01000001.1_2_SPACER3;Parent=SEQF3441.1|QYBL01000001.1_2;Note=CGGCATATATAATCCGTAAAGGCGGCAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3441.1|QYBL01000001.1	CCTyper	direct_repeat	184055	184092	38	+	.	ID=SEQF3441.1|QYBL01000001.1_2_REPEAT4;Parent=SEQF3441.1|QYBL01000001.1_2;Note=ATGTTTTAGAGCCATGTTAGTTACTGATTTACTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3441.1|QYBL01000001.1	CCTyper	OPERON	177110	185668	8559	+	.	ID=SEQF3441.1|QYBL01000001.1@6;Genome_ID=SEQF3441.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Cas9_0_II,Cas1_4_CAS-I-II-III-IV-V-VI,Cas2_5_CAS-I-II-III-IV-V-VI,Csn2_1_CAS-II-A,Csa5gr11_3_CAS-I-A;Positions=161,162,163,164,168;E-values=0.00e+00,1.70e-103,1.90e-51,9.80e-107,1.70e-03;CoverageSeq=0.768,0.931,0.965,0.982,0.663;CoverageHMM=1.0,0.996,0.983,0.995,0.389;Strand_Interference=1;Strand_Adaptation=1
SEQF3441.1|QYBL01000001.1	CCTyper	OPERON	70848	81505	10658	+	.	ID=SEQF3441.1|QYBL01000001.1@3;Genome_ID=SEQF3441.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-E;Complete_Interference=100%;Complete_Adaptation=50%;Best_type=I-E;Best_score=24.0;Genes=WYL_3_CAS-I-II-III-IV-V-VI,Cas3_0_CAS-I,Cas8e_4_CAS-I-E,Cse2gr11_5_CAS-I-E,Cas7_1_CAS-I-E,Cas5_0_IE,Cas6e_2_CAS-I-II-III-IV-V-VI,Cas1_0_IE,DEDDh_0_CAS-I-II-III-IV-V-VI;Positions=66,67,68,69,70,71,72,73,74;E-values=1.20e-09,5.50e-70,1.90e-91,1.20e-67,3.00e-113,2.30e-42,1.40e-47,4.70e-108,4.70e-35;CoverageSeq=0.485,0.439,0.888,0.95,0.943,0.862,0.972,0.854,0.512;CoverageHMM=0.89,0.986,0.994,0.975,0.997,0.974,0.995,0.993,0.981;Strand_Interference=1;Strand_Adaptation=1
SEQF3441.1|QYBL01000001.1	CCTyper	CDS	79660	80601	314	+	.	ID=SEQF3441.1|QYBL01000001.1_73_cas;Genome_ID=SEQF3441.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IE;coding_strand=+;E-value=4.7e-108;Score=357.2;Coverage_Seq=0.8535031847133758;Coverage_Hmm=0.9925650557620818
SEQF3441.1|QYBL01000001.1	CCTyper	CDS	181162	182028	289	+	.	ID=SEQF3441.1|QYBL01000001.1_162_cas;Genome_ID=SEQF3441.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.7e-103;Score=342.3;Coverage_Seq=0.9307958477508651;Coverage_Hmm=0.9963636363636363
SEQF3441.1|QYBL01000001.1	CCTyper	CDS	182025	182369	115	+	.	ID=SEQF3441.1|QYBL01000001.1_163_cas;Genome_ID=SEQF3441.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.9e-51;Score=170.0;Coverage_Seq=0.9652173913043478;Coverage_Hmm=0.9827586206896551
SEQF3441.1|QYBL01000001.1	CCTyper	CDS	72021	74807	929	+	.	ID=SEQF3441.1|QYBL01000001.1_67_cas;Genome_ID=SEQF3441.1;Feature_type=CDS;Product=Cas Prediction : Cas3_0_CAS-I;coding_strand=+;E-value=5.5e-70;Score=233.0;Coverage_Seq=0.43918191603875134;Coverage_Hmm=0.9858356940509915
SEQF3441.1|QYBL01000001.1	CCTyper	CDS	78294	79010	239	+	.	ID=SEQF3441.1|QYBL01000001.1_71_cas;Genome_ID=SEQF3441.1;Feature_type=CDS;Product=Cas Prediction : Cas5_0_IE;coding_strand=+;E-value=2.3e-42;Score=142.0;Coverage_Seq=0.8619246861924686;Coverage_Hmm=0.9739130434782609
SEQF3441.1|QYBL01000001.1	CCTyper	CDS	79016	79657	214	+	.	ID=SEQF3441.1|QYBL01000001.1_72_cas;Genome_ID=SEQF3441.1;Feature_type=CDS;Product=Cas Prediction : Cas6e_2_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.4e-47;Score=159.4;Coverage_Seq=0.9719626168224299;Coverage_Hmm=0.995049504950495
SEQF3441.1|QYBL01000001.1	CCTyper	CDS	77068	78288	407	+	.	ID=SEQF3441.1|QYBL01000001.1_70_cas;Genome_ID=SEQF3441.1;Feature_type=CDS;Product=Cas Prediction : Cas7_1_CAS-I-E;coding_strand=+;E-value=3e-113;Score=375.7;Coverage_Seq=0.9434889434889435;Coverage_Hmm=0.9972144846796658
SEQF3441.1|QYBL01000001.1	CCTyper	CDS	74800	76482	561	+	.	ID=SEQF3441.1|QYBL01000001.1_68_cas;Genome_ID=SEQF3441.1;Feature_type=CDS;Product=Cas Prediction : Cas8e_4_CAS-I-E;coding_strand=+;E-value=1.9e-91;Score=304.1;Coverage_Seq=0.8877005347593583;Coverage_Hmm=0.9935483870967742
SEQF3441.1|QYBL01000001.1	CCTyper	CDS	177110	181162	1351	+	.	ID=SEQF3441.1|QYBL01000001.1_161_cas;Genome_ID=SEQF3441.1;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=+;E-value=0.0;Score=1118.9;Coverage_Seq=0.767579570688379;Coverage_Hmm=1.0
SEQF3441.1|QYBL01000001.1	CCTyper	CDS	185384	185668	95	+	.	ID=SEQF3441.1|QYBL01000001.1_168_cas;Genome_ID=SEQF3441.1;Feature_type=CDS;Product=Cas Prediction : Csa5gr11_3_CAS-I-A;coding_strand=+;E-value=0.0017;Score=15.4;Coverage_Seq=0.6631578947368421;Coverage_Hmm=0.3888888888888889
SEQF3441.1|QYBL01000001.1	CCTyper	CDS	76479	77078	200	+	.	ID=SEQF3441.1|QYBL01000001.1_69_cas;Genome_ID=SEQF3441.1;Feature_type=CDS;Product=Cas Prediction : Cse2gr11_5_CAS-I-E;coding_strand=+;E-value=1.2e-67;Score=224.2;Coverage_Seq=0.95;Coverage_Hmm=0.9748743718592965
SEQF3441.1|QYBL01000001.1	CCTyper	CDS	182359	183021	221	+	.	ID=SEQF3441.1|QYBL01000001.1_164_cas;Genome_ID=SEQF3441.1;Feature_type=CDS;Product=Cas Prediction : Csn2_1_CAS-II-A;coding_strand=+;E-value=9.8e-107;Score=352.3;Coverage_Seq=0.9819004524886877;Coverage_Hmm=0.9954128440366973
SEQF3441.1|QYBL01000001.1	CCTyper	CDS	80603	81505	301	+	.	ID=SEQF3441.1|QYBL01000001.1_74_cas;Genome_ID=SEQF3441.1;Feature_type=CDS;Product=Cas Prediction : DEDDh_0_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=4.7e-35;Score=117.9;Coverage_Seq=0.5116279069767442;Coverage_Hmm=0.98125
SEQF3441.1|QYBL01000001.1	CCTyper	CDS	70848	71831	328	+	.	ID=SEQF3441.1|QYBL01000001.1_66_cas;Genome_ID=SEQF3441.1;Feature_type=CDS;Product=Cas Prediction : WYL_3_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.2e-09;Score=35.3;Coverage_Seq=0.4847560975609756;Coverage_Hmm=0.8895348837209303