SEQF3459.1|QYCE01000002.1	CCTyper	repeat_region	23110	23410	301	+	.	ID=SEQF3459.1|QYCE01000002.1_1;Genome_ID=SEQF3459.1;Note=Predictor:CCtyper;Start:23110;End:23410;Consensus_Repeat:AGTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Number_of_Repeats:5;Repeat_Length:37;Average_Spacer_Length:29;Repeat_Identity:97.9;Spacer_Identity:42.1;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: II-C;Cas_Subtype_Prediction:II-C;Subtype_Probability:0.988;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3459.1|QYCE01000002.1	CCTyper	direct_repeat	23110	23146	37	+	.	ID=SEQF3459.1|QYCE01000002.1_1_REPEAT1;Parent=SEQF3459.1|QYCE01000002.1_1;Note=TGTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3459.1|QYCE01000002.1	CCTyper	binding_site	23147	23175	29	+	.	ID=SEQF3459.1|QYCE01000002.1_1_SPACER1;Parent=SEQF3459.1|QYCE01000002.1_1;Note=GAACAGAGAAGTTAATCGAAGGTCTGTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3459.1|QYCE01000002.1	CCTyper	direct_repeat	23176	23212	37	+	.	ID=SEQF3459.1|QYCE01000002.1_1_REPEAT2;Parent=SEQF3459.1|QYCE01000002.1_1;Note=AGTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3459.1|QYCE01000002.1	CCTyper	binding_site	23213	23241	29	+	.	ID=SEQF3459.1|QYCE01000002.1_1_SPACER2;Parent=SEQF3459.1|QYCE01000002.1_1;Note=AGATCGGAAACTTTATGGAAATGGAATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3459.1|QYCE01000002.1	CCTyper	direct_repeat	23242	23278	37	+	.	ID=SEQF3459.1|QYCE01000002.1_1_REPEAT3;Parent=SEQF3459.1|QYCE01000002.1_1;Note=AGTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3459.1|QYCE01000002.1	CCTyper	binding_site	23279	23307	29	+	.	ID=SEQF3459.1|QYCE01000002.1_1_SPACER3;Parent=SEQF3459.1|QYCE01000002.1_1;Note=ATTTGACGACGCAAGAGCGTTTAGCTCCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3459.1|QYCE01000002.1	CCTyper	direct_repeat	23308	23344	37	+	.	ID=SEQF3459.1|QYCE01000002.1_1_REPEAT4;Parent=SEQF3459.1|QYCE01000002.1_1;Note=AGTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3459.1|QYCE01000002.1	CCTyper	binding_site	23345	23373	29	+	.	ID=SEQF3459.1|QYCE01000002.1_1_SPACER4;Parent=SEQF3459.1|QYCE01000002.1_1;Note=TAAAAAAGCTGTATCGCTTTGTTTAATCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3459.1|QYCE01000002.1	CCTyper	direct_repeat	23374	23410	37	+	.	ID=SEQF3459.1|QYCE01000002.1_1_REPEAT5;Parent=SEQF3459.1|QYCE01000002.1_1;Note=AGTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3459.1|QYCE01000002.1	CCTyper	OPERON	21470	29312	7843	-	.	ID=SEQF3459.1|QYCE01000002.1@1;Genome_ID=SEQF3459.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Csa5gr11_3_CAS-I-A,Csn2_2_CAS-II-A,Cas2_5_CAS-I-II-III-IV-V-VI,Cas1_4_CAS-I-II-III-IV-V-VI,Cas9_0_II;Positions=22,24,25,26,27;E-values=1.00e-04,1.40e-125,2.40e-31,1.60e-98,1.20e-199;CoverageSeq=0.851,0.989,0.963,0.911,0.743;CoverageHMM=0.389,1.0,0.897,0.996,0.976;Strand_Interference=-1;Strand_Adaptation=-1
SEQF3459.1|QYCE01000002.1	CCTyper	CDS	24834	25742	303	-	.	ID=SEQF3459.1|QYCE01000002.1_26_cas;Genome_ID=SEQF3459.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.6e-98;Score=326.1;Coverage_Seq=0.9108910891089109;Coverage_Hmm=0.9963636363636363
SEQF3459.1|QYCE01000002.1	CCTyper	CDS	24508	24831	108	-	.	ID=SEQF3459.1|QYCE01000002.1_25_cas;Genome_ID=SEQF3459.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=2.4e-31;Score=105.2;Coverage_Seq=0.9629629629629629;Coverage_Hmm=0.896551724137931
SEQF3459.1|QYCE01000002.1	CCTyper	CDS	25908	29312	1135	-	.	ID=SEQF3459.1|QYCE01000002.1_27_cas;Genome_ID=SEQF3459.1;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=-;E-value=1.2e-199;Score=662.4;Coverage_Seq=0.7427312775330397;Coverage_Hmm=0.9759036144578314
SEQF3459.1|QYCE01000002.1	CCTyper	CDS	21470	21691	74	-	.	ID=SEQF3459.1|QYCE01000002.1_22_cas;Genome_ID=SEQF3459.1;Feature_type=CDS;Product=Cas Prediction : Csa5gr11_3_CAS-I-A;coding_strand=-;E-value=0.0001;Score=19.4;Coverage_Seq=0.8513513513513513;Coverage_Hmm=0.3888888888888889
SEQF3459.1|QYCE01000002.1	CCTyper	CDS	23462	24511	350	-	.	ID=SEQF3459.1|QYCE01000002.1_24_cas;Genome_ID=SEQF3459.1;Feature_type=CDS;Product=Cas Prediction : Csn2_2_CAS-II-A;coding_strand=-;E-value=1.4e-125;Score=415.6;Coverage_Seq=0.9885714285714285;Coverage_Hmm=1.0