SEQF3461.1|QYCG01000004.1	CCTyper	repeat_region	8350	8848	499	+	.	ID=SEQF3461.1|QYCG01000004.1_1;Genome_ID=SEQF3461.1;Note=Predictor:CCtyper;Start:8350;End:8848;Consensus_Repeat:GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Number_of_Repeats:8;Repeat_Length:36;Average_Spacer_Length:30.1;Repeat_Identity:90.9;Spacer_Identity:43.6;Spacer_Length_Sem:0.1;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.549;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3461.1|QYCG01000004.1	CCTyper	direct_repeat	8350	8385	36	+	.	ID=SEQF3461.1|QYCG01000004.1_1_REPEAT1;Parent=SEQF3461.1|QYCG01000004.1_1;Note=ATTTTAGTAAATCAGTAACTAACATGGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3461.1|QYCG01000004.1	CCTyper	binding_site	8386	8415	30	+	.	ID=SEQF3461.1|QYCG01000004.1_1_SPACER1;Parent=SEQF3461.1|QYCG01000004.1_1;Note=TCAAATGTAGTAGTTACTTTCTTTTCACAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3461.1|QYCG01000004.1	CCTyper	direct_repeat	8416	8451	36	+	.	ID=SEQF3461.1|QYCG01000004.1_1_REPEAT2;Parent=SEQF3461.1|QYCG01000004.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3461.1|QYCG01000004.1	CCTyper	binding_site	8452	8481	30	+	.	ID=SEQF3461.1|QYCG01000004.1_1_SPACER2;Parent=SEQF3461.1|QYCG01000004.1_1;Note=TGATTATCAAATCATTGATAAAAATTGGGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3461.1|QYCG01000004.1	CCTyper	direct_repeat	8482	8517	36	+	.	ID=SEQF3461.1|QYCG01000004.1_1_REPEAT3;Parent=SEQF3461.1|QYCG01000004.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3461.1|QYCG01000004.1	CCTyper	binding_site	8518	8547	30	+	.	ID=SEQF3461.1|QYCG01000004.1_1_SPACER3;Parent=SEQF3461.1|QYCG01000004.1_1;Note=ACTACTATTGAACAATTCACAAATTGGCAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3461.1|QYCG01000004.1	CCTyper	direct_repeat	8548	8583	36	+	.	ID=SEQF3461.1|QYCG01000004.1_1_REPEAT4;Parent=SEQF3461.1|QYCG01000004.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3461.1|QYCG01000004.1	CCTyper	binding_site	8584	8613	30	+	.	ID=SEQF3461.1|QYCG01000004.1_1_SPACER4;Parent=SEQF3461.1|QYCG01000004.1_1;Note=ACAGTAGATTGTATTGTTGTTCTTAGACCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3461.1|QYCG01000004.1	CCTyper	direct_repeat	8614	8649	36	+	.	ID=SEQF3461.1|QYCG01000004.1_1_REPEAT5;Parent=SEQF3461.1|QYCG01000004.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3461.1|QYCG01000004.1	CCTyper	binding_site	8650	8679	30	+	.	ID=SEQF3461.1|QYCG01000004.1_1_SPACER5;Parent=SEQF3461.1|QYCG01000004.1_1;Note=AGTCGTAATCTGCTTTGATTTGTATCAAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3461.1|QYCG01000004.1	CCTyper	direct_repeat	8680	8715	36	+	.	ID=SEQF3461.1|QYCG01000004.1_1_REPEAT6;Parent=SEQF3461.1|QYCG01000004.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3461.1|QYCG01000004.1	CCTyper	binding_site	8716	8746	31	+	.	ID=SEQF3461.1|QYCG01000004.1_1_SPACER6;Parent=SEQF3461.1|QYCG01000004.1_1;Note=TACCATTAGCCAGCATTTGCGACCACTGAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3461.1|QYCG01000004.1	CCTyper	direct_repeat	8747	8782	36	+	.	ID=SEQF3461.1|QYCG01000004.1_1_REPEAT7;Parent=SEQF3461.1|QYCG01000004.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3461.1|QYCG01000004.1	CCTyper	binding_site	8783	8812	30	+	.	ID=SEQF3461.1|QYCG01000004.1_1_SPACER7;Parent=SEQF3461.1|QYCG01000004.1_1;Note=AACCTTACCTGCGGATCCACTTTGGATCCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3461.1|QYCG01000004.1	CCTyper	direct_repeat	8813	8848	36	+	.	ID=SEQF3461.1|QYCG01000004.1_1_REPEAT8;Parent=SEQF3461.1|QYCG01000004.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3461.1|QYCG01000004.1	CCTyper	OPERON	6775	15581	8807	-	.	ID=SEQF3461.1|QYCG01000004.1@1;Genome_ID=SEQF3461.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Csa5gr11_3_CAS-I-A,Csn2_1_CAS-II-A,Cas2_5_CAS-I-II-III-IV-V-VI,Cas1_4_CAS-I-II-III-IV-V-VI,Cas9_1_II;Positions=7,11,12,13,14;E-values=2.00e-04,1.40e-106,1.40e-51,3.10e-103,0.00e+00;CoverageSeq=0.663,0.982,0.965,0.931,0.996;CoverageHMM=0.389,0.995,0.983,0.996,0.999;Strand_Interference=-1;Strand_Adaptation=-1
SEQF3461.1|QYCG01000004.1	CCTyper	CDS	10678	11544	289	-	.	ID=SEQF3461.1|QYCG01000004.1_13_cas;Genome_ID=SEQF3461.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=3.1e-103;Score=341.5;Coverage_Seq=0.9307958477508651;Coverage_Hmm=0.9963636363636363
SEQF3461.1|QYCG01000004.1	CCTyper	CDS	10337	10681	115	-	.	ID=SEQF3461.1|QYCG01000004.1_12_cas;Genome_ID=SEQF3461.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.4e-51;Score=170.4;Coverage_Seq=0.9652173913043478;Coverage_Hmm=0.9827586206896551
SEQF3461.1|QYCG01000004.1	CCTyper	CDS	11544	15581	1346	-	.	ID=SEQF3461.1|QYCG01000004.1_14_cas;Genome_ID=SEQF3461.1;Feature_type=CDS;Product=Cas Prediction : Cas9_1_II;coding_strand=-;E-value=0.0;Score=1259.0;Coverage_Seq=0.9955423476968797;Coverage_Hmm=0.9991071428571429
SEQF3461.1|QYCG01000004.1	CCTyper	CDS	6775	7059	95	-	.	ID=SEQF3461.1|QYCG01000004.1_7_cas;Genome_ID=SEQF3461.1;Feature_type=CDS;Product=Cas Prediction : Csa5gr11_3_CAS-I-A;coding_strand=-;E-value=0.0002;Score=18.4;Coverage_Seq=0.6631578947368421;Coverage_Hmm=0.3888888888888889
SEQF3461.1|QYCG01000004.1	CCTyper	CDS	9685	10347	221	-	.	ID=SEQF3461.1|QYCG01000004.1_11_cas;Genome_ID=SEQF3461.1;Feature_type=CDS;Product=Cas Prediction : Csn2_1_CAS-II-A;coding_strand=-;E-value=1.4e-106;Score=351.8;Coverage_Seq=0.9819004524886877;Coverage_Hmm=0.9954128440366973
