SEQF3554.1|AQTU01000003.1	CCTyper	repeat_region	80566	81268	703	+	.	ID=SEQF3554.1|AQTU01000003.1_1;Genome_ID=SEQF3554.1;Note=Predictor:CCtyper;Start:80566;End:81268;Consensus_Repeat:GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAA;Number_of_Repeats:11;Repeat_Length:35;Average_Spacer_Length:31.8;Repeat_Identity:100.0;Spacer_Identity:43.7;Spacer_Length_Sem:0.8;Trusted:True;Cas_Type_Prediction: II-C;Cas_Subtype_Prediction:II-C;Subtype_Probability:0.987;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3554.1|AQTU01000003.1	CCTyper	direct_repeat	80566	80600	35	+	.	ID=SEQF3554.1|AQTU01000003.1_1_REPEAT1;Parent=SEQF3554.1|AQTU01000003.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3554.1|AQTU01000003.1	CCTyper	binding_site	80601	80631	31	+	.	ID=SEQF3554.1|AQTU01000003.1_1_SPACER1;Parent=SEQF3554.1|AQTU01000003.1_1;Note=ATGTTGAATTTGATACTCGTAGCGTTACGGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3554.1|AQTU01000003.1	CCTyper	direct_repeat	80632	80666	35	+	.	ID=SEQF3554.1|AQTU01000003.1_1_REPEAT2;Parent=SEQF3554.1|AQTU01000003.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3554.1|AQTU01000003.1	CCTyper	binding_site	80667	80697	31	+	.	ID=SEQF3554.1|AQTU01000003.1_1_SPACER2;Parent=SEQF3554.1|AQTU01000003.1_1;Note=ATAGTACCCTGTTAAAAATGTACCGTCACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3554.1|AQTU01000003.1	CCTyper	direct_repeat	80698	80732	35	+	.	ID=SEQF3554.1|AQTU01000003.1_1_REPEAT3;Parent=SEQF3554.1|AQTU01000003.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3554.1|AQTU01000003.1	CCTyper	binding_site	80733	80763	31	+	.	ID=SEQF3554.1|AQTU01000003.1_1_SPACER3;Parent=SEQF3554.1|AQTU01000003.1_1;Note=ACTAAAGGCGCTTAACGTGATTGGGCAAGTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3554.1|AQTU01000003.1	CCTyper	direct_repeat	80764	80798	35	+	.	ID=SEQF3554.1|AQTU01000003.1_1_REPEAT4;Parent=SEQF3554.1|AQTU01000003.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3554.1|AQTU01000003.1	CCTyper	binding_site	80799	80830	32	+	.	ID=SEQF3554.1|AQTU01000003.1_1_SPACER4;Parent=SEQF3554.1|AQTU01000003.1_1;Note=ACTTTCAAATTGTTGAATAATTGTACCATGAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3554.1|AQTU01000003.1	CCTyper	direct_repeat	80831	80865	35	+	.	ID=SEQF3554.1|AQTU01000003.1_1_REPEAT5;Parent=SEQF3554.1|AQTU01000003.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3554.1|AQTU01000003.1	CCTyper	binding_site	80866	80896	31	+	.	ID=SEQF3554.1|AQTU01000003.1_1_SPACER5;Parent=SEQF3554.1|AQTU01000003.1_1;Note=ACATGTTTTAAAAATCCTTTCTATTCAATTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3554.1|AQTU01000003.1	CCTyper	direct_repeat	80897	80931	35	+	.	ID=SEQF3554.1|AQTU01000003.1_1_REPEAT6;Parent=SEQF3554.1|AQTU01000003.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3554.1|AQTU01000003.1	CCTyper	binding_site	80932	80970	39	+	.	ID=SEQF3554.1|AQTU01000003.1_1_SPACER6;Parent=SEQF3554.1|AQTU01000003.1_1;Note=CTCAACCGTTCACTCCATCTGCACCAATTGATTTAATTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3554.1|AQTU01000003.1	CCTyper	direct_repeat	80971	81005	35	+	.	ID=SEQF3554.1|AQTU01000003.1_1_REPEAT7;Parent=SEQF3554.1|AQTU01000003.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3554.1|AQTU01000003.1	CCTyper	binding_site	81006	81036	31	+	.	ID=SEQF3554.1|AQTU01000003.1_1_SPACER7;Parent=SEQF3554.1|AQTU01000003.1_1;Note=CACAACGCCTTAAACTCGCAATCAAATGCCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3554.1|AQTU01000003.1	CCTyper	direct_repeat	81037	81071	35	+	.	ID=SEQF3554.1|AQTU01000003.1_1_REPEAT8;Parent=SEQF3554.1|AQTU01000003.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3554.1|AQTU01000003.1	CCTyper	binding_site	81072	81102	31	+	.	ID=SEQF3554.1|AQTU01000003.1_1_SPACER8;Parent=SEQF3554.1|AQTU01000003.1_1;Note=CAGTCGTTTTCTGCCTTCGTGAAATCATTGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3554.1|AQTU01000003.1	CCTyper	direct_repeat	81103	81137	35	+	.	ID=SEQF3554.1|AQTU01000003.1_1_REPEAT9;Parent=SEQF3554.1|AQTU01000003.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3554.1|AQTU01000003.1	CCTyper	binding_site	81138	81167	30	+	.	ID=SEQF3554.1|AQTU01000003.1_1_SPACER9;Parent=SEQF3554.1|AQTU01000003.1_1;Note=CCTTGCAGAAGTCTCTTATACAGACCTTAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3554.1|AQTU01000003.1	CCTyper	direct_repeat	81168	81202	35	+	.	ID=SEQF3554.1|AQTU01000003.1_1_REPEAT10;Parent=SEQF3554.1|AQTU01000003.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3554.1|AQTU01000003.1	CCTyper	binding_site	81203	81233	31	+	.	ID=SEQF3554.1|AQTU01000003.1_1_SPACER10;Parent=SEQF3554.1|AQTU01000003.1_1;Note=CATTTACCATCAGAATGTTTCAACCAGCGTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3554.1|AQTU01000003.1	CCTyper	direct_repeat	81234	81268	35	+	.	ID=SEQF3554.1|AQTU01000003.1_1_REPEAT11;Parent=SEQF3554.1|AQTU01000003.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3554.1|AQTU01000011.1	CCTyper	repeat_region	65611	65776	166	+	.	ID=SEQF3554.1|AQTU01000011.1_2;Genome_ID=SEQF3554.1;Note=Predictor:CCtyper;Start:65611;End:65776;Consensus_Repeat:TGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Number_of_Repeats:3;Repeat_Length:34;Average_Spacer_Length:32.0;Repeat_Identity:100.0;Spacer_Identity:52.4;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: II-C;Cas_Subtype_Prediction:II-C;Subtype_Probability:0.988;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3554.1|AQTU01000011.1	CCTyper	direct_repeat	65611	65644	34	+	.	ID=SEQF3554.1|AQTU01000011.1_2_REPEAT1;Parent=SEQF3554.1|AQTU01000011.1_2;Note=TGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3554.1|AQTU01000011.1	CCTyper	binding_site	65645	65676	32	+	.	ID=SEQF3554.1|AQTU01000011.1_2_SPACER1;Parent=SEQF3554.1|AQTU01000011.1_2;Note=ATGCAAGCGATCCTATGATTTTAAGATTAGGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3554.1|AQTU01000011.1	CCTyper	direct_repeat	65677	65710	34	+	.	ID=SEQF3554.1|AQTU01000011.1_2_REPEAT2;Parent=SEQF3554.1|AQTU01000011.1_2;Note=TGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3554.1|AQTU01000011.1	CCTyper	binding_site	65711	65742	32	+	.	ID=SEQF3554.1|AQTU01000011.1_2_SPACER2;Parent=SEQF3554.1|AQTU01000011.1_2;Note=AACGTGTCCTGATATCCTTGATATCCTTAGGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3554.1|AQTU01000011.1	CCTyper	direct_repeat	65743	65776	34	+	.	ID=SEQF3554.1|AQTU01000011.1_2_REPEAT3;Parent=SEQF3554.1|AQTU01000011.1_2;Note=TGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3554.1|AQTU01000003.1	CCTyper	OPERON	74677	80496	5820	+	.	ID=SEQF3554.1|AQTU01000003.1@5;Genome_ID=SEQF3554.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Cas9_0_II,Cas1_4_CAS-I-II-III-IV-V-VI,Cas2_5_CAS-I-II-III-IV-V-VI,Csn2_2_CAS-II-A;Positions=78,79,80,81;E-values=4.50e-218,1.60e-98,1.30e-31,4.30e-141;CoverageSeq=0.717,0.911,0.954,0.991;CoverageHMM=0.986,0.996,0.888,0.997;Strand_Interference=1;Strand_Adaptation=1
SEQF3554.1|AQTU01000003.1	CCTyper	CDS	78220	79128	303	+	.	ID=SEQF3554.1|AQTU01000003.1_79_cas;Genome_ID=SEQF3554.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.6e-98;Score=326.3;Coverage_Seq=0.9108910891089109;Coverage_Hmm=0.9963636363636363
SEQF3554.1|AQTU01000003.1	CCTyper	CDS	79133	79456	108	+	.	ID=SEQF3554.1|AQTU01000003.1_80_cas;Genome_ID=SEQF3554.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.3e-31;Score=106.2;Coverage_Seq=0.9537037037037037;Coverage_Hmm=0.8879310344827587
SEQF3554.1|AQTU01000003.1	CCTyper	CDS	74677	78042	1122	+	.	ID=SEQF3554.1|AQTU01000003.1_78_cas;Genome_ID=SEQF3554.1;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=+;E-value=4.5000000000000003e-218;Score=723.5;Coverage_Seq=0.7165775401069518;Coverage_Hmm=0.9855421686746988
SEQF3554.1|AQTU01000003.1	CCTyper	CDS	79453	80496	348	+	.	ID=SEQF3554.1|AQTU01000003.1_81_cas;Genome_ID=SEQF3554.1;Feature_type=CDS;Product=Cas Prediction : Csn2_2_CAS-II-A;coding_strand=+;E-value=4.3e-141;Score=466.8;Coverage_Seq=0.9913793103448276;Coverage_Hmm=0.9970845481049563