SEQF3560.1|JPFV01000012.1	CCTyper	repeat_region	147712	149593	1882	+	.	ID=SEQF3560.1|JPFV01000012.1_1;Genome_ID=SEQF3560.1;Note=Predictor:CCtyper;Start:147712;End:149593;Consensus_Repeat:GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Number_of_Repeats:29;Repeat_Length:36.0;Average_Spacer_Length:29.9;Repeat_Identity:97.9;Spacer_Identity:40.7;Spacer_Length_Sem:0.1;Trusted:True;Cas_Type_Prediction: II-C;Cas_Subtype_Prediction:II-C;Subtype_Probability:0.946;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	direct_repeat	147712	147747	36	+	.	ID=SEQF3560.1|JPFV01000012.1_1_REPEAT1;Parent=SEQF3560.1|JPFV01000012.1_1;Note=AATGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	binding_site	147748	147777	30	+	.	ID=SEQF3560.1|JPFV01000012.1_1_SPACER1;Parent=SEQF3560.1|JPFV01000012.1_1;Note=CTACCAGCACACGTTCCACCAGGCTTGTAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	direct_repeat	147778	147813	36	+	.	ID=SEQF3560.1|JPFV01000012.1_1_REPEAT2;Parent=SEQF3560.1|JPFV01000012.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	binding_site	147814	147843	30	+	.	ID=SEQF3560.1|JPFV01000012.1_1_SPACER2;Parent=SEQF3560.1|JPFV01000012.1_1;Note=GGTTCTCGGCACGTTGATTTTGTCGCTAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	direct_repeat	147844	147879	36	+	.	ID=SEQF3560.1|JPFV01000012.1_1_REPEAT3;Parent=SEQF3560.1|JPFV01000012.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	binding_site	147880	147908	29	+	.	ID=SEQF3560.1|JPFV01000012.1_1_SPACER3;Parent=SEQF3560.1|JPFV01000012.1_1;Note=CTCAACACTATACCACACGGTTGGGATAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	direct_repeat	147909	147944	36	+	.	ID=SEQF3560.1|JPFV01000012.1_1_REPEAT4;Parent=SEQF3560.1|JPFV01000012.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	binding_site	147945	147974	30	+	.	ID=SEQF3560.1|JPFV01000012.1_1_SPACER4;Parent=SEQF3560.1|JPFV01000012.1_1;Note=AGATTTCCAAAACAGAATCAGGCACACTCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	direct_repeat	147975	148010	36	+	.	ID=SEQF3560.1|JPFV01000012.1_1_REPEAT5;Parent=SEQF3560.1|JPFV01000012.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	binding_site	148011	148040	30	+	.	ID=SEQF3560.1|JPFV01000012.1_1_SPACER5;Parent=SEQF3560.1|JPFV01000012.1_1;Note=GGGGTGCAAGAAAGACAGATGGCAGCCTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	direct_repeat	148041	148076	36	+	.	ID=SEQF3560.1|JPFV01000012.1_1_REPEAT6;Parent=SEQF3560.1|JPFV01000012.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	binding_site	148077	148105	29	+	.	ID=SEQF3560.1|JPFV01000012.1_1_SPACER6;Parent=SEQF3560.1|JPFV01000012.1_1;Note=TGCCCGTTGTAAATGAAATAGAGTTCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	direct_repeat	148106	148141	36	+	.	ID=SEQF3560.1|JPFV01000012.1_1_REPEAT7;Parent=SEQF3560.1|JPFV01000012.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	binding_site	148142	148171	30	+	.	ID=SEQF3560.1|JPFV01000012.1_1_SPACER7;Parent=SEQF3560.1|JPFV01000012.1_1;Note=TCTCGGTGGTTTAGATAAAGCAGTAAGCCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	direct_repeat	148172	148207	36	+	.	ID=SEQF3560.1|JPFV01000012.1_1_REPEAT8;Parent=SEQF3560.1|JPFV01000012.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	binding_site	148208	148237	30	+	.	ID=SEQF3560.1|JPFV01000012.1_1_SPACER8;Parent=SEQF3560.1|JPFV01000012.1_1;Note=CGGGCGTTTTATCCAGCTTGCAGGGGTCAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	direct_repeat	148238	148273	36	+	.	ID=SEQF3560.1|JPFV01000012.1_1_REPEAT9;Parent=SEQF3560.1|JPFV01000012.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	binding_site	148274	148303	30	+	.	ID=SEQF3560.1|JPFV01000012.1_1_SPACER9;Parent=SEQF3560.1|JPFV01000012.1_1;Note=CTAACATAATTTTTAAAGGAGCGCCACAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	direct_repeat	148304	148339	36	+	.	ID=SEQF3560.1|JPFV01000012.1_1_REPEAT10;Parent=SEQF3560.1|JPFV01000012.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	binding_site	148340	148369	30	+	.	ID=SEQF3560.1|JPFV01000012.1_1_SPACER10;Parent=SEQF3560.1|JPFV01000012.1_1;Note=CGTGATTATCGCCGTGGATGATGTTTGTGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	direct_repeat	148370	148405	36	+	.	ID=SEQF3560.1|JPFV01000012.1_1_REPEAT11;Parent=SEQF3560.1|JPFV01000012.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	binding_site	148406	148435	30	+	.	ID=SEQF3560.1|JPFV01000012.1_1_SPACER11;Parent=SEQF3560.1|JPFV01000012.1_1;Note=TATAATATCATTCACGGTGCGTTTATCGTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	direct_repeat	148436	148471	36	+	.	ID=SEQF3560.1|JPFV01000012.1_1_REPEAT12;Parent=SEQF3560.1|JPFV01000012.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	binding_site	148472	148501	30	+	.	ID=SEQF3560.1|JPFV01000012.1_1_SPACER12;Parent=SEQF3560.1|JPFV01000012.1_1;Note=TACCATTGTTGACTCTTCACAAAAAGAAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	direct_repeat	148502	148537	36	+	.	ID=SEQF3560.1|JPFV01000012.1_1_REPEAT13;Parent=SEQF3560.1|JPFV01000012.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	binding_site	148538	148567	30	+	.	ID=SEQF3560.1|JPFV01000012.1_1_SPACER13;Parent=SEQF3560.1|JPFV01000012.1_1;Note=TGTTTTGGTCAGTAGTGGCAGAATTAGAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	direct_repeat	148568	148603	36	+	.	ID=SEQF3560.1|JPFV01000012.1_1_REPEAT14;Parent=SEQF3560.1|JPFV01000012.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	binding_site	148604	148633	30	+	.	ID=SEQF3560.1|JPFV01000012.1_1_SPACER14;Parent=SEQF3560.1|JPFV01000012.1_1;Note=TTTCTGTAACTCGTCTTGTATAGTAGATAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	direct_repeat	148634	148669	36	+	.	ID=SEQF3560.1|JPFV01000012.1_1_REPEAT15;Parent=SEQF3560.1|JPFV01000012.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	binding_site	148670	148699	30	+	.	ID=SEQF3560.1|JPFV01000012.1_1_SPACER15;Parent=SEQF3560.1|JPFV01000012.1_1;Note=AGTTGCTTATCCCCTGTGTTTCCCGTGATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	direct_repeat	148700	148735	36	+	.	ID=SEQF3560.1|JPFV01000012.1_1_REPEAT16;Parent=SEQF3560.1|JPFV01000012.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	binding_site	148736	148765	30	+	.	ID=SEQF3560.1|JPFV01000012.1_1_SPACER16;Parent=SEQF3560.1|JPFV01000012.1_1;Note=TTGTTAGTGATGCGAAAATGAAAGAAGCTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	direct_repeat	148766	148801	36	+	.	ID=SEQF3560.1|JPFV01000012.1_1_REPEAT17;Parent=SEQF3560.1|JPFV01000012.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	binding_site	148802	148830	29	+	.	ID=SEQF3560.1|JPFV01000012.1_1_SPACER17;Parent=SEQF3560.1|JPFV01000012.1_1;Note=CTACTCCTTGACGCTTCCGCTTGGATCAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	direct_repeat	148831	148866	36	+	.	ID=SEQF3560.1|JPFV01000012.1_1_REPEAT18;Parent=SEQF3560.1|JPFV01000012.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	binding_site	148867	148896	30	+	.	ID=SEQF3560.1|JPFV01000012.1_1_SPACER18;Parent=SEQF3560.1|JPFV01000012.1_1;Note=TAAGAACTCAGAAAACTATATACCACAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	direct_repeat	148897	148932	36	+	.	ID=SEQF3560.1|JPFV01000012.1_1_REPEAT19;Parent=SEQF3560.1|JPFV01000012.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	binding_site	148933	148962	30	+	.	ID=SEQF3560.1|JPFV01000012.1_1_SPACER19;Parent=SEQF3560.1|JPFV01000012.1_1;Note=ATACAACAAAAATAAAAAATAAAAATTATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	direct_repeat	148963	148998	36	+	.	ID=SEQF3560.1|JPFV01000012.1_1_REPEAT20;Parent=SEQF3560.1|JPFV01000012.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	binding_site	148999	149028	30	+	.	ID=SEQF3560.1|JPFV01000012.1_1_SPACER20;Parent=SEQF3560.1|JPFV01000012.1_1;Note=GGTAGCGGCACCATTAGTATTAAAAAATGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	direct_repeat	149029	149064	36	+	.	ID=SEQF3560.1|JPFV01000012.1_1_REPEAT21;Parent=SEQF3560.1|JPFV01000012.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	binding_site	149065	149094	30	+	.	ID=SEQF3560.1|JPFV01000012.1_1_SPACER21;Parent=SEQF3560.1|JPFV01000012.1_1;Note=ACGAACTCATCGCCAAGATAAATATGACCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	direct_repeat	149095	149130	36	+	.	ID=SEQF3560.1|JPFV01000012.1_1_REPEAT22;Parent=SEQF3560.1|JPFV01000012.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	binding_site	149131	149160	30	+	.	ID=SEQF3560.1|JPFV01000012.1_1_SPACER22;Parent=SEQF3560.1|JPFV01000012.1_1;Note=AATCTATCTTTTTACTCAATTTTGCGTCAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	direct_repeat	149161	149196	36	+	.	ID=SEQF3560.1|JPFV01000012.1_1_REPEAT23;Parent=SEQF3560.1|JPFV01000012.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	binding_site	149197	149227	31	+	.	ID=SEQF3560.1|JPFV01000012.1_1_SPACER23;Parent=SEQF3560.1|JPFV01000012.1_1;Note=CAGTAAAAGAATTGTTGGAGAAAGTAGAAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	direct_repeat	149228	149263	36	+	.	ID=SEQF3560.1|JPFV01000012.1_1_REPEAT24;Parent=SEQF3560.1|JPFV01000012.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	binding_site	149264	149293	30	+	.	ID=SEQF3560.1|JPFV01000012.1_1_SPACER24;Parent=SEQF3560.1|JPFV01000012.1_1;Note=AGACCTGAGTCTTTAAATTTGAAATCTGAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	direct_repeat	149294	149329	36	+	.	ID=SEQF3560.1|JPFV01000012.1_1_REPEAT25;Parent=SEQF3560.1|JPFV01000012.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	binding_site	149330	149360	31	+	.	ID=SEQF3560.1|JPFV01000012.1_1_SPACER25;Parent=SEQF3560.1|JPFV01000012.1_1;Note=CAGTAAAAGAATTGTTGGAGAAAGTAGAAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	direct_repeat	149361	149396	36	+	.	ID=SEQF3560.1|JPFV01000012.1_1_REPEAT26;Parent=SEQF3560.1|JPFV01000012.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	binding_site	149397	149426	30	+	.	ID=SEQF3560.1|JPFV01000012.1_1_SPACER26;Parent=SEQF3560.1|JPFV01000012.1_1;Note=CAAGTGGCAATATCAACAATCCAGGCTCTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	direct_repeat	149427	149462	36	+	.	ID=SEQF3560.1|JPFV01000012.1_1_REPEAT27;Parent=SEQF3560.1|JPFV01000012.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	binding_site	149463	149492	30	+	.	ID=SEQF3560.1|JPFV01000012.1_1_SPACER27;Parent=SEQF3560.1|JPFV01000012.1_1;Note=GCTCTTCCTAGGGTATCAGATAAGACTTAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	direct_repeat	149493	149528	36	+	.	ID=SEQF3560.1|JPFV01000012.1_1_REPEAT28;Parent=SEQF3560.1|JPFV01000012.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	binding_site	149529	149557	29	+	.	ID=SEQF3560.1|JPFV01000012.1_1_SPACER28;Parent=SEQF3560.1|JPFV01000012.1_1;Note=CACCCTCATAATCTACCTCAGCTCCATCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	direct_repeat	149558	149593	36	+	.	ID=SEQF3560.1|JPFV01000012.1_1_REPEAT29;Parent=SEQF3560.1|JPFV01000012.1_1;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000011.1	CCTyper	repeat_region	24741	25000	260	+	.	ID=SEQF3560.1|JPFV01000011.1-1_3;Genome_ID=SEQF3560.1;Note=Predictor:CCtyper;Start:24741;End:25000;Consensus_Repeat:GTATAAGAACCTATCTGCCTCGAGAGGGGACGGAAAC;Number_of_Repeats:4;Repeat_Length:31.0;Average_Spacer_Length:45.3;Repeat_Identity:70.3;Spacer_Identity:44.5;Spacer_Length_Sem:4.7;Trusted:True;Cas_Type_Prediction: III-A;Cas_Subtype_Prediction:III-A;Subtype_Probability:0.988;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000011.1	CCTyper	direct_repeat	24741	24777	37	+	.	ID=SEQF3560.1|JPFV01000011.1-1_3_REPEAT1;Parent=SEQF3560.1|JPFV01000011.1-1_3;Note=GTATAAGAACCTATCTACCTCGAGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000011.1	CCTyper	binding_site	24778	24813	36	+	.	ID=SEQF3560.1|JPFV01000011.1-1_3_SPACER1;Parent=SEQF3560.1|JPFV01000011.1-1_3;Note=TAGTTTCTTCAAATTGAGAAACAAACAATTCTTTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000011.1	CCTyper	direct_repeat	24814	24850	37	+	.	ID=SEQF3560.1|JPFV01000011.1-1_3_REPEAT2;Parent=SEQF3560.1|JPFV01000011.1-1_3;Note=GTATAAGAACCTATCTGCCTCGAGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000011.1	CCTyper	binding_site	24851	24900	50	+	.	ID=SEQF3560.1|JPFV01000011.1-1_3_SPACER2;Parent=SEQF3560.1|JPFV01000011.1-1_3;Note=TCCATCTCCTCGATCAACCAATCAAGGTTCTTGCGTGTAGAACACCCTAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000011.1	CCTyper	direct_repeat	24901	24923	23	+	.	ID=SEQF3560.1|JPFV01000011.1-1_3_REPEAT3;Parent=SEQF3560.1|JPFV01000011.1-1_3;Note=TCACCTCGGTAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000011.1	CCTyper	binding_site	24924	24973	50	+	.	ID=SEQF3560.1|JPFV01000011.1-1_3_SPACER3;Parent=SEQF3560.1|JPFV01000011.1-1_3;Note=TTTTATACCTTTCCTAGATTGTAATGAAAGAGCAGGTCTGGTAGAACATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000011.1	CCTyper	direct_repeat	24974	25000	27	+	.	ID=SEQF3560.1|JPFV01000011.1-1_3_REPEAT4;Parent=SEQF3560.1|JPFV01000011.1-1_3;Note=CTATTCACCTCGAGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000011.1	CCTyper	repeat_region	25130	25666	537	+	.	ID=SEQF3560.1|JPFV01000011.1-1_4;Genome_ID=SEQF3560.1;Note=Predictor:CCtyper;Start:25130;End:25666;Consensus_Repeat:TCACCTCGGTAGGGGACGGAAAC;Number_of_Repeats:8;Repeat_Length:30.4;Average_Spacer_Length:42.0;Repeat_Identity:67.7;Spacer_Identity:41.6;Spacer_Length_Sem:2.5;Trusted:True;Cas_Type_Prediction: III-A;Cas_Subtype_Prediction:III-A;Subtype_Probability:0.992;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000011.1	CCTyper	direct_repeat	25130	25152	23	+	.	ID=SEQF3560.1|JPFV01000011.1-1_4_REPEAT1;Parent=SEQF3560.1|JPFV01000011.1-1_4;Note=TCACCTCGGCAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000011.1	CCTyper	binding_site	25153	25188	36	+	.	ID=SEQF3560.1|JPFV01000011.1-1_4_SPACER1;Parent=SEQF3560.1|JPFV01000011.1-1_4;Note=CCTTTAACTGATTCTTCATGATTTTCATGATGTCCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000011.1	CCTyper	direct_repeat	25189	25223	35	+	.	ID=SEQF3560.1|JPFV01000011.1-1_4_REPEAT2;Parent=SEQF3560.1|JPFV01000011.1-1_4;Note=GTATAAGAACTTATCTACCTCGAGAGTGGACGGAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000011.1	CCTyper	binding_site	25224	25273	50	+	.	ID=SEQF3560.1|JPFV01000011.1-1_4_SPACER2;Parent=SEQF3560.1|JPFV01000011.1-1_4;Note=CTAGTGCAGCAGTTGATAATAGAAGTTTTTTGTGCGTAAAACATCCACTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000011.1	CCTyper	direct_repeat	25274	25295	22	+	.	ID=SEQF3560.1|JPFV01000011.1-1_4_REPEAT3;Parent=SEQF3560.1|JPFV01000011.1-1_4;Note=TACCTCGCAAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000011.1	CCTyper	binding_site	25296	25333	38	+	.	ID=SEQF3560.1|JPFV01000011.1-1_4_SPACER3;Parent=SEQF3560.1|JPFV01000011.1-1_4;Note=GTTTTATTTACTCCACAACAATCAATTTTCTACAATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000011.1	CCTyper	direct_repeat	25334	25370	37	+	.	ID=SEQF3560.1|JPFV01000011.1-1_4_REPEAT4;Parent=SEQF3560.1|JPFV01000011.1-1_4;Note=GTATAAGAACCTATCTACCTCGAGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000011.1	CCTyper	binding_site	25371	25407	37	+	.	ID=SEQF3560.1|JPFV01000011.1-1_4_SPACER4;Parent=SEQF3560.1|JPFV01000011.1-1_4;Note=CTGGTGAACCTGTACCACGGATTTCATGCCCTACAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000011.1	CCTyper	direct_repeat	25408	25444	37	+	.	ID=SEQF3560.1|JPFV01000011.1-1_4_REPEAT5;Parent=SEQF3560.1|JPFV01000011.1-1_4;Note=GTAAGACAACCTATTCACCTCGAGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000011.1	CCTyper	binding_site	25445	25496	52	+	.	ID=SEQF3560.1|JPFV01000011.1-1_4_SPACER5;Parent=SEQF3560.1|JPFV01000011.1-1_4;Note=GATTTTTCTTGTTCCTGCTTAGCAGTATCAATTTATTGGTAGACCACCCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000011.1	CCTyper	direct_repeat	25497	25519	23	+	.	ID=SEQF3560.1|JPFV01000011.1-1_4_REPEAT6;Parent=SEQF3560.1|JPFV01000011.1-1_4;Note=TCACCTCGGTAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000011.1	CCTyper	binding_site	25520	25563	44	+	.	ID=SEQF3560.1|JPFV01000011.1-1_4_SPACER6;Parent=SEQF3560.1|JPFV01000011.1-1_4;Note=GAATCTGAATAGGGATGATCAGTGATTAAACAATCAGTAGAACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000011.1	CCTyper	direct_repeat	25564	25592	29	+	.	ID=SEQF3560.1|JPFV01000011.1-1_4_REPEAT7;Parent=SEQF3560.1|JPFV01000011.1-1_4;Note=ACCTATCCACCTCGAGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000011.1	CCTyper	binding_site	25593	25629	37	+	.	ID=SEQF3560.1|JPFV01000011.1-1_4_SPACER7;Parent=SEQF3560.1|JPFV01000011.1-1_4;Note=CCAAAAACTTCATAAAGTTCCATAATTTTCCTTCTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000011.1	CCTyper	direct_repeat	25630	25666	37	+	.	ID=SEQF3560.1|JPFV01000011.1-1_4_REPEAT8;Parent=SEQF3560.1|JPFV01000011.1-1_4;Note=GTATAAGAACCTATGCACCTCGCGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3560.1|JPFV01000012.1	CCTyper	OPERON	145517	155482	9966	-	.	ID=SEQF3560.1|JPFV01000012.1@5;Genome_ID=SEQF3560.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Cas3HD_0_CAS-I,Csn2_2_CAS-II-A,Cas2_5_CAS-I-II-III-IV-V-VI,Cas1_4_CAS-I-II-III-IV-V-VI,Cas9_0_II;Positions=143,146,147,148,150;E-values=2.20e-03,4.90e-144,1.20e-31,7.70e-91,9.00e-219;CoverageSeq=0.306,0.994,0.954,0.903,0.848;CoverageHMM=0.433,1.0,0.888,0.905,0.984;Strand_Interference=-1;Strand_Adaptation=-1
SEQF3560.1|JPFV01000011.1	CCTyper	OPERON	23539	34248	10710	+	.	ID=SEQF3560.1|JPFV01000011.1@2;Genome_ID=SEQF3560.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type III-A;Complete_Interference=100%;Complete_Adaptation=NA;Best_type=III-A;Best_score=18.0;Genes=Cas1_0_CAS-I-II-III-IV-V-VI,Cas2_2_CAS-I-II-III-IV-V-VI,Cas6_0_CAS-I-II-III-IV-V-VI,Cas10_1_CAS-III,Csm2gr11_7_CAS-III-A,Csm3gr7_1_CAS-III-A-III-D,Csm4gr5_1_CAS-III-A,Csm5gr7_0_CAS-III-A-III-D,Csm6_1_CAS-III,Csm6_1_CAS-III;Positions=28,29,30,31,32,33,34,35,36,37;E-values=1.60e-61,7.40e-19,1.00e-27,1.50e-171,1.80e-23,1.20e-72,4.60e-42,4.40e-31,2.80e-78,1.30e-86;CoverageSeq=0.892,0.545,0.783,0.83,0.921,0.9,0.987,0.789,0.829,0.858;CoverageHMM=0.726,0.835,0.912,1.0,0.982,0.963,0.984,0.773,0.897,0.983;Strand_Interference=1;Strand_Adaptation=NA
SEQF3560.1|JPFV01000011.1	CCTyper	CDS	26520	28760	747	+	.	ID=SEQF3560.1|JPFV01000011.1_31_cas;Genome_ID=SEQF3560.1;Feature_type=CDS;Product=Cas Prediction : Cas10_1_CAS-III;coding_strand=+;E-value=1.5e-171;Score=569.0;Coverage_Seq=0.8299866131191432;Coverage_Hmm=1.0
SEQF3560.1|JPFV01000011.1	CCTyper	CDS	23539	24318	260	+	.	ID=SEQF3560.1|JPFV01000011.1_28_cas;Genome_ID=SEQF3560.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.6e-61;Score=204.9;Coverage_Seq=0.8923076923076924;Coverage_Hmm=0.7255520504731862
SEQF3560.1|JPFV01000012.1	CCTyper	CDS	151032	151865	278	-	.	ID=SEQF3560.1|JPFV01000012.1_148_cas;Genome_ID=SEQF3560.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=7.7e-91;Score=300.9;Coverage_Seq=0.9028776978417267;Coverage_Hmm=0.9054545454545454
SEQF3560.1|JPFV01000011.1	CCTyper	CDS	24318	24680	121	+	.	ID=SEQF3560.1|JPFV01000011.1_29_cas;Genome_ID=SEQF3560.1;Feature_type=CDS;Product=Cas Prediction : Cas2_2_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=7.4e-19;Score=64.6;Coverage_Seq=0.5454545454545454;Coverage_Hmm=0.8354430379746836
SEQF3560.1|JPFV01000012.1	CCTyper	CDS	150704	151027	108	-	.	ID=SEQF3560.1|JPFV01000012.1_147_cas;Genome_ID=SEQF3560.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.2e-31;Score=106.2;Coverage_Seq=0.9537037037037037;Coverage_Hmm=0.8879310344827587
SEQF3560.1|JPFV01000012.1	CCTyper	CDS	145517	146821	435	+	.	ID=SEQF3560.1|JPFV01000012.1_143_cas;Genome_ID=SEQF3560.1;Feature_type=CDS;Product=Cas Prediction : Cas3HD_0_CAS-I;coding_strand=+;E-value=0.0022;Score=14.7;Coverage_Seq=0.3057471264367816;Coverage_Hmm=0.43349753694581283
SEQF3560.1|JPFV01000011.1	CCTyper	CDS	25808	26539	244	+	.	ID=SEQF3560.1|JPFV01000011.1_30_cas;Genome_ID=SEQF3560.1;Feature_type=CDS;Product=Cas Prediction : Cas6_0_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1e-27;Score=94.7;Coverage_Seq=0.7827868852459017;Coverage_Hmm=0.9123711340206185
SEQF3560.1|JPFV01000012.1	CCTyper	CDS	152117	155482	1122	-	.	ID=SEQF3560.1|JPFV01000012.1_150_cas;Genome_ID=SEQF3560.1;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=-;E-value=9e-219;Score=725.7;Coverage_Seq=0.8475935828877005;Coverage_Hmm=0.9843373493975903
SEQF3560.1|JPFV01000011.1	CCTyper	CDS	28764	29144	127	+	.	ID=SEQF3560.1|JPFV01000011.1_32_cas;Genome_ID=SEQF3560.1;Feature_type=CDS;Product=Cas Prediction : Csm2gr11_7_CAS-III-A;coding_strand=+;E-value=1.8e-23;Score=80.5;Coverage_Seq=0.9212598425196851;Coverage_Hmm=0.9818181818181818
SEQF3560.1|JPFV01000011.1	CCTyper	CDS	29144	29806	221	+	.	ID=SEQF3560.1|JPFV01000011.1_33_cas;Genome_ID=SEQF3560.1;Feature_type=CDS;Product=Cas Prediction : Csm3gr7_1_CAS-III-A-III-D;coding_strand=+;E-value=1.2e-72;Score=241.0;Coverage_Seq=0.9004524886877828;Coverage_Hmm=0.9627906976744186
SEQF3560.1|JPFV01000011.1	CCTyper	CDS	29808	30713	302	+	.	ID=SEQF3560.1|JPFV01000011.1_34_cas;Genome_ID=SEQF3560.1;Feature_type=CDS;Product=Cas Prediction : Csm4gr5_1_CAS-III-A;coding_strand=+;E-value=4.6e-42;Score=141.2;Coverage_Seq=0.9867549668874173;Coverage_Hmm=0.9841269841269841
SEQF3560.1|JPFV01000011.1	CCTyper	CDS	30710	31789	360	+	.	ID=SEQF3560.1|JPFV01000011.1_35_cas;Genome_ID=SEQF3560.1;Feature_type=CDS;Product=Cas Prediction : Csm5gr7_0_CAS-III-A-III-D;coding_strand=+;E-value=4.4e-31;Score=105.3;Coverage_Seq=0.7888888888888889;Coverage_Hmm=0.7726027397260274
SEQF3560.1|JPFV01000011.1	CCTyper	CDS	31786	32946	387	+	.	ID=SEQF3560.1|JPFV01000011.1_36_cas;Genome_ID=SEQF3560.1;Feature_type=CDS;Product=Cas Prediction : Csm6_1_CAS-III;coding_strand=+;E-value=2.8e-78;Score=260.2;Coverage_Seq=0.8294573643410853;Coverage_Hmm=0.8972222222222223
SEQF3560.1|JPFV01000011.1	CCTyper	CDS	32959	34248	430	+	.	ID=SEQF3560.1|JPFV01000011.1_37_cas;Genome_ID=SEQF3560.1;Feature_type=CDS;Product=Cas Prediction : Csm6_1_CAS-III;coding_strand=+;E-value=1.3e-86;Score=287.6;Coverage_Seq=0.858139534883721;Coverage_Hmm=0.9833333333333333
SEQF3560.1|JPFV01000012.1	CCTyper	CDS	149664	150707	348	-	.	ID=SEQF3560.1|JPFV01000012.1_146_cas;Genome_ID=SEQF3560.1;Feature_type=CDS;Product=Cas Prediction : Csn2_2_CAS-II-A;coding_strand=-;E-value=4.9e-144;Score=476.3;Coverage_Seq=0.9942528735632183;Coverage_Hmm=1.0