SEQF3569.1|JYGP01000001.1	CCTyper	repeat_region	163493	164651	1159	+	.	ID=SEQF3569.1|JYGP01000001.1_1;Genome_ID=SEQF3569.1;Note=Predictor:CCtyper;Start:163493;End:164651;Consensus_Repeat:GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Number_of_Repeats:18;Repeat_Length:36;Average_Spacer_Length:30.1;Repeat_Identity:97.9;Spacer_Identity:41.1;Spacer_Length_Sem:0.1;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.549;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3569.1|JYGP01000001.1	CCTyper	direct_repeat	163493	163528	36	+	.	ID=SEQF3569.1|JYGP01000001.1_1_REPEAT1;Parent=SEQF3569.1|JYGP01000001.1_1;Note=GAGTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3569.1|JYGP01000001.1	CCTyper	binding_site	163529	163558	30	+	.	ID=SEQF3569.1|JYGP01000001.1_1_SPACER1;Parent=SEQF3569.1|JYGP01000001.1_1;Note=CGCAAGCCCTCTCTCTGTTGGGTTGTCAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3569.1|JYGP01000001.1	CCTyper	direct_repeat	163559	163594	36	+	.	ID=SEQF3569.1|JYGP01000001.1_1_REPEAT2;Parent=SEQF3569.1|JYGP01000001.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3569.1|JYGP01000001.1	CCTyper	binding_site	163595	163624	30	+	.	ID=SEQF3569.1|JYGP01000001.1_1_SPACER2;Parent=SEQF3569.1|JYGP01000001.1_1;Note=ACCTCTATTTGAGGAAAAGCGGTTGACTAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3569.1|JYGP01000001.1	CCTyper	direct_repeat	163625	163660	36	+	.	ID=SEQF3569.1|JYGP01000001.1_1_REPEAT3;Parent=SEQF3569.1|JYGP01000001.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3569.1|JYGP01000001.1	CCTyper	binding_site	163661	163690	30	+	.	ID=SEQF3569.1|JYGP01000001.1_1_SPACER3;Parent=SEQF3569.1|JYGP01000001.1_1;Note=TGGAATACACCAGAAAACCACTCTCCGATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3569.1|JYGP01000001.1	CCTyper	direct_repeat	163691	163726	36	+	.	ID=SEQF3569.1|JYGP01000001.1_1_REPEAT4;Parent=SEQF3569.1|JYGP01000001.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3569.1|JYGP01000001.1	CCTyper	binding_site	163727	163756	30	+	.	ID=SEQF3569.1|JYGP01000001.1_1_SPACER4;Parent=SEQF3569.1|JYGP01000001.1_1;Note=TCTAGCTGTAACTTGCTGTACTGCTGACTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3569.1|JYGP01000001.1	CCTyper	direct_repeat	163757	163792	36	+	.	ID=SEQF3569.1|JYGP01000001.1_1_REPEAT5;Parent=SEQF3569.1|JYGP01000001.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3569.1|JYGP01000001.1	CCTyper	binding_site	163793	163822	30	+	.	ID=SEQF3569.1|JYGP01000001.1_1_SPACER5;Parent=SEQF3569.1|JYGP01000001.1_1;Note=GTTTGCTCATCCTTGAGTTCTCCTAGGATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3569.1|JYGP01000001.1	CCTyper	direct_repeat	163823	163858	36	+	.	ID=SEQF3569.1|JYGP01000001.1_1_REPEAT6;Parent=SEQF3569.1|JYGP01000001.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3569.1|JYGP01000001.1	CCTyper	binding_site	163859	163888	30	+	.	ID=SEQF3569.1|JYGP01000001.1_1_SPACER6;Parent=SEQF3569.1|JYGP01000001.1_1;Note=TTTCCTTTACCACCTTTGCCTCCGCCACCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3569.1|JYGP01000001.1	CCTyper	direct_repeat	163889	163924	36	+	.	ID=SEQF3569.1|JYGP01000001.1_1_REPEAT7;Parent=SEQF3569.1|JYGP01000001.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3569.1|JYGP01000001.1	CCTyper	binding_site	163925	163954	30	+	.	ID=SEQF3569.1|JYGP01000001.1_1_SPACER7;Parent=SEQF3569.1|JYGP01000001.1_1;Note=TTTAGACGAGGTGGAAATATCTTATCTGCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3569.1|JYGP01000001.1	CCTyper	direct_repeat	163955	163990	36	+	.	ID=SEQF3569.1|JYGP01000001.1_1_REPEAT8;Parent=SEQF3569.1|JYGP01000001.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3569.1|JYGP01000001.1	CCTyper	binding_site	163991	164020	30	+	.	ID=SEQF3569.1|JYGP01000001.1_1_SPACER8;Parent=SEQF3569.1|JYGP01000001.1_1;Note=GAGAAATTGGTAGAGCGATTTGAGAATGAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3569.1|JYGP01000001.1	CCTyper	direct_repeat	164021	164056	36	+	.	ID=SEQF3569.1|JYGP01000001.1_1_REPEAT9;Parent=SEQF3569.1|JYGP01000001.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3569.1|JYGP01000001.1	CCTyper	binding_site	164057	164086	30	+	.	ID=SEQF3569.1|JYGP01000001.1_1_SPACER9;Parent=SEQF3569.1|JYGP01000001.1_1;Note=AACCAATAACGAGGGGAACTATGGACGTCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3569.1|JYGP01000001.1	CCTyper	direct_repeat	164087	164122	36	+	.	ID=SEQF3569.1|JYGP01000001.1_1_REPEAT10;Parent=SEQF3569.1|JYGP01000001.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3569.1|JYGP01000001.1	CCTyper	binding_site	164123	164152	30	+	.	ID=SEQF3569.1|JYGP01000001.1_1_SPACER10;Parent=SEQF3569.1|JYGP01000001.1_1;Note=TATTTCTTAGGAATATTTCGTTCTACTTGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3569.1|JYGP01000001.1	CCTyper	direct_repeat	164153	164188	36	+	.	ID=SEQF3569.1|JYGP01000001.1_1_REPEAT11;Parent=SEQF3569.1|JYGP01000001.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3569.1|JYGP01000001.1	CCTyper	binding_site	164189	164218	30	+	.	ID=SEQF3569.1|JYGP01000001.1_1_SPACER11;Parent=SEQF3569.1|JYGP01000001.1_1;Note=AAAGTAACTCAACGTTCCATTCGGCAAGCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3569.1|JYGP01000001.1	CCTyper	direct_repeat	164219	164254	36	+	.	ID=SEQF3569.1|JYGP01000001.1_1_REPEAT12;Parent=SEQF3569.1|JYGP01000001.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3569.1|JYGP01000001.1	CCTyper	binding_site	164255	164284	30	+	.	ID=SEQF3569.1|JYGP01000001.1_1_SPACER12;Parent=SEQF3569.1|JYGP01000001.1_1;Note=CCATCACTAGAAACTTTGATAGAGCGGAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3569.1|JYGP01000001.1	CCTyper	direct_repeat	164285	164320	36	+	.	ID=SEQF3569.1|JYGP01000001.1_1_REPEAT13;Parent=SEQF3569.1|JYGP01000001.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3569.1|JYGP01000001.1	CCTyper	binding_site	164321	164350	30	+	.	ID=SEQF3569.1|JYGP01000001.1_1_SPACER13;Parent=SEQF3569.1|JYGP01000001.1_1;Note=TGAATCGAAACAACACGGATGTGAATTGTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3569.1|JYGP01000001.1	CCTyper	direct_repeat	164351	164386	36	+	.	ID=SEQF3569.1|JYGP01000001.1_1_REPEAT14;Parent=SEQF3569.1|JYGP01000001.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3569.1|JYGP01000001.1	CCTyper	binding_site	164387	164416	30	+	.	ID=SEQF3569.1|JYGP01000001.1_1_SPACER14;Parent=SEQF3569.1|JYGP01000001.1_1;Note=ATACACAGAGATTGACAAGAAGTGGAACTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3569.1|JYGP01000001.1	CCTyper	direct_repeat	164417	164452	36	+	.	ID=SEQF3569.1|JYGP01000001.1_1_REPEAT15;Parent=SEQF3569.1|JYGP01000001.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3569.1|JYGP01000001.1	CCTyper	binding_site	164453	164482	30	+	.	ID=SEQF3569.1|JYGP01000001.1_1_SPACER15;Parent=SEQF3569.1|JYGP01000001.1_1;Note=GACGGTAATCAGGCGCATACTAAAACAATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3569.1|JYGP01000001.1	CCTyper	direct_repeat	164483	164518	36	+	.	ID=SEQF3569.1|JYGP01000001.1_1_REPEAT16;Parent=SEQF3569.1|JYGP01000001.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3569.1|JYGP01000001.1	CCTyper	binding_site	164519	164549	31	+	.	ID=SEQF3569.1|JYGP01000001.1_1_SPACER16;Parent=SEQF3569.1|JYGP01000001.1_1;Note=GTAGAGTGTTTATCTAAAGCTTTACGCTTAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3569.1|JYGP01000001.1	CCTyper	direct_repeat	164550	164585	36	+	.	ID=SEQF3569.1|JYGP01000001.1_1_REPEAT17;Parent=SEQF3569.1|JYGP01000001.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3569.1|JYGP01000001.1	CCTyper	binding_site	164586	164615	30	+	.	ID=SEQF3569.1|JYGP01000001.1_1_SPACER17;Parent=SEQF3569.1|JYGP01000001.1_1;Note=TTGTTCTCGTATACGATGAAATCAACAACG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3569.1|JYGP01000001.1	CCTyper	direct_repeat	164616	164651	36	+	.	ID=SEQF3569.1|JYGP01000001.1_1_REPEAT18;Parent=SEQF3569.1|JYGP01000001.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3569.1|JYGP01000002.1	CCTyper	repeat_region	162193	162358	166	+	.	ID=SEQF3569.1|JYGP01000002.1_2;Genome_ID=SEQF3569.1;Note=Predictor:CCtyper;Start:162193;End:162358;Consensus_Repeat:GTTTTATCGGTCACAATTTTGGAGACTACAAAAACC;Number_of_Repeats:3;Repeat_Length:36;Average_Spacer_Length:29.0;Repeat_Identity:100.0;Spacer_Identity:41.5;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.556;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3569.1|JYGP01000002.1	CCTyper	direct_repeat	162193	162228	36	+	.	ID=SEQF3569.1|JYGP01000002.1_2_REPEAT1;Parent=SEQF3569.1|JYGP01000002.1_2;Note=GTTTTATCGGTCACAATTTTGGAGACTACAAAAACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3569.1|JYGP01000002.1	CCTyper	binding_site	162229	162257	29	+	.	ID=SEQF3569.1|JYGP01000002.1_2_SPACER1;Parent=SEQF3569.1|JYGP01000002.1_2;Note=GCATAACAGGAAGCCGTCAGCAACATGAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3569.1|JYGP01000002.1	CCTyper	direct_repeat	162258	162293	36	+	.	ID=SEQF3569.1|JYGP01000002.1_2_REPEAT2;Parent=SEQF3569.1|JYGP01000002.1_2;Note=GTTTTATCGGTCACAATTTTGGAGACTACAAAAACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3569.1|JYGP01000002.1	CCTyper	binding_site	162294	162322	29	+	.	ID=SEQF3569.1|JYGP01000002.1_2_SPACER2;Parent=SEQF3569.1|JYGP01000002.1_2;Note=GTTCCTAGCATCATGATTTTACCAACGGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3569.1|JYGP01000002.1	CCTyper	direct_repeat	162323	162358	36	+	.	ID=SEQF3569.1|JYGP01000002.1_2_REPEAT3;Parent=SEQF3569.1|JYGP01000002.1_2;Note=GTTTTATCGGTCACAATTTTGGAGACTACAAAAACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3569.1|JYGP01000001.1	CCTyper	OPERON	164742	170779	6038	-	.	ID=SEQF3569.1|JYGP01000001.1@4;Genome_ID=SEQF3569.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Csn2_1_CAS-II-A,Cas2_5_CAS-I-II-III-IV-V-VI,Cas1_4_CAS-I-II-III-IV-V-VI,Cas9_1_II;Positions=153,154,155,156;E-values=1.80e-100,8.90e-50,6.10e-103,0.00e+00;CoverageSeq=0.982,0.939,0.931,0.994;CoverageHMM=0.995,0.957,0.996,0.998;Strand_Interference=-1;Strand_Adaptation=-1
SEQF3569.1|JYGP01000001.1	CCTyper	CDS	165735	166601	289	-	.	ID=SEQF3569.1|JYGP01000001.1_155_cas;Genome_ID=SEQF3569.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=6.1e-103;Score=340.5;Coverage_Seq=0.9307958477508651;Coverage_Hmm=0.9963636363636363
SEQF3569.1|JYGP01000001.1	CCTyper	CDS	165394	165738	115	-	.	ID=SEQF3569.1|JYGP01000001.1_154_cas;Genome_ID=SEQF3569.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=8.9e-50;Score=164.6;Coverage_Seq=0.9391304347826087;Coverage_Hmm=0.9568965517241379
SEQF3569.1|JYGP01000001.1	CCTyper	CDS	166601	170779	1393	-	.	ID=SEQF3569.1|JYGP01000001.1_156_cas;Genome_ID=SEQF3569.1;Feature_type=CDS;Product=Cas Prediction : Cas9_1_II;coding_strand=-;E-value=0.0;Score=1096.3;Coverage_Seq=0.994256999282125;Coverage_Hmm=0.9982142857142857
SEQF3569.1|JYGP01000001.1	CCTyper	CDS	164742	165404	221	-	.	ID=SEQF3569.1|JYGP01000001.1_153_cas;Genome_ID=SEQF3569.1;Feature_type=CDS;Product=Cas Prediction : Csn2_1_CAS-II-A;coding_strand=-;E-value=1.8e-100;Score=331.8;Coverage_Seq=0.9819004524886877;Coverage_Hmm=0.9954128440366973