SEQF3572.1|JWFA01000052.1	CCTyper	repeat_region	47135	47542	408	+	.	ID=SEQF3572.1|JWFA01000052.1-2_1;Genome_ID=SEQF3572.1;Note=Predictor:CCtyper;Start:47135;End:47542;Consensus_Repeat:GTAAAACGACCTATTCACCTCGAGAGGGGACGGAAAC;Number_of_Repeats:6;Repeat_Length:34.3;Average_Spacer_Length:40.4;Repeat_Identity:80.2;Spacer_Identity:39.7;Spacer_Length_Sem:3.3;Trusted:True;Cas_Type_Prediction: III-A;Cas_Subtype_Prediction:III-A;Subtype_Probability:0.906;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3572.1|JWFA01000052.1	CCTyper	direct_repeat	47135	47171	37	+	.	ID=SEQF3572.1|JWFA01000052.1-2_1_REPEAT1;Parent=SEQF3572.1|JWFA01000052.1-2_1;Note=GTAAAACGACCTATTCACCTCGAGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3572.1|JWFA01000052.1	CCTyper	binding_site	47172	47209	38	+	.	ID=SEQF3572.1|JWFA01000052.1-2_1_SPACER1;Parent=SEQF3572.1|JWFA01000052.1-2_1;Note=TTTTTCTCCTTTTTAAGCTACATACTCTTCAATTGAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3572.1|JWFA01000052.1	CCTyper	direct_repeat	47210	47246	37	+	.	ID=SEQF3572.1|JWFA01000052.1-2_1_REPEAT2;Parent=SEQF3572.1|JWFA01000052.1-2_1;Note=GTAAAACAACCTATTCACCTCGAGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3572.1|JWFA01000052.1	CCTyper	binding_site	47247	47284	38	+	.	ID=SEQF3572.1|JWFA01000052.1-2_1_SPACER2;Parent=SEQF3572.1|JWFA01000052.1-2_1;Note=AAGGTACCGTCTGCTGTTTTTAATTTCATTGTAGTTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3572.1|JWFA01000052.1	CCTyper	direct_repeat	47285	47321	37	+	.	ID=SEQF3572.1|JWFA01000052.1-2_1_REPEAT3;Parent=SEQF3572.1|JWFA01000052.1-2_1;Note=GTAAAACAACCTATTCACCTCGCGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3572.1|JWFA01000052.1	CCTyper	binding_site	47322	47355	34	+	.	ID=SEQF3572.1|JWFA01000052.1-2_1_SPACER3;Parent=SEQF3572.1|JWFA01000052.1-2_1;Note=AAAATATCACGAGCTTGACGTTTCTTTTGATTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3572.1|JWFA01000052.1	CCTyper	direct_repeat	47356	47392	37	+	.	ID=SEQF3572.1|JWFA01000052.1-2_1_REPEAT4;Parent=SEQF3572.1|JWFA01000052.1-2_1;Note=GTAAAACACCCTATTCACCTCGAGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3572.1|JWFA01000052.1	CCTyper	binding_site	47393	47431	39	+	.	ID=SEQF3572.1|JWFA01000052.1-2_1_SPACER4;Parent=SEQF3572.1|JWFA01000052.1-2_1;Note=CCGTCATGTTCAACCTCCGTCAAAAATAAAAGTTGGATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3572.1|JWFA01000052.1	CCTyper	direct_repeat	47432	47468	37	+	.	ID=SEQF3572.1|JWFA01000052.1-2_1_REPEAT5;Parent=SEQF3572.1|JWFA01000052.1-2_1;Note=GTAAAACACCCTATTCACCTCGCGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3572.1|JWFA01000052.1	CCTyper	binding_site	47469	47521	53	+	.	ID=SEQF3572.1|JWFA01000052.1-2_1_SPACER5;Parent=SEQF3572.1|JWFA01000052.1-2_1;Note=AATTCAGGTTTCGCATAAATACTCACATCTAAACCATAAAGAAGATCCTACGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3572.1|JWFA01000052.1	CCTyper	direct_repeat	47522	47542	21	+	.	ID=SEQF3572.1|JWFA01000052.1-2_1_REPEAT6;Parent=SEQF3572.1|JWFA01000052.1-2_1;Note=ACCTCGAGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3572.1|JWFA01000052.1	CCTyper	OPERON	45705	62112	16408	+	.	ID=SEQF3572.1|JWFA01000052.1@3;Genome_ID=SEQF3572.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type III-A;Complete_Interference=100%;Complete_Adaptation=NA;Best_type=III-A;Best_score=19.0;Genes=Cas1_0_CAS-I-II-III-IV-V-VI,Cas2_2_CAS-I-II-III-IV-V-VI,Cas6_0_CAS-I-II-III-IV-V-VI,Cas10_1_CAS-III,Csm2gr11_7_CAS-III-A,Csm3gr7_1_CAS-III-A-III-D,Csm4gr5_1_CAS-III-A,Csm5gr7_0_CAS-III-A-III-D,Csm6_1_CAS-III,Csm6_1_CAS-III,Csm6_3_CAS-III,AbiEii_0_CAS-III;Positions=52,53,54,55,56,57,58,59,60,61,62,66;E-values=2.30e-79,4.40e-19,1.00e-26,1.40e-170,1.30e-22,1.40e-71,2.90e-42,4.20e-30,4.30e-79,3.10e-36,8.20e-45,4.70e-04;CoverageSeq=0.946,0.619,0.779,0.912,0.921,0.9,0.987,0.751,0.827,0.749,0.963,0.396;CoverageHMM=0.994,0.873,0.907,0.998,0.982,0.963,0.984,0.729,0.894,0.464,0.497,0.331;Strand_Interference=1;Strand_Adaptation=NA
SEQF3572.1|JWFA01000052.1	CCTyper	CDS	61363	62112	250	+	.	ID=SEQF3572.1|JWFA01000052.1_66_cas;Genome_ID=SEQF3572.1;Feature_type=CDS;Product=Cas Prediction : AbiEii_0_CAS-III;coding_strand=+;E-value=0.00047;Score=16.5;Coverage_Seq=0.396;Coverage_Hmm=0.33098591549295775
SEQF3572.1|JWFA01000052.1	CCTyper	CDS	48467	50713	749	+	.	ID=SEQF3572.1|JWFA01000052.1_55_cas;Genome_ID=SEQF3572.1;Feature_type=CDS;Product=Cas Prediction : Cas10_1_CAS-III;coding_strand=+;E-value=1.4e-170;Score=565.7;Coverage_Seq=0.9118825100133512;Coverage_Hmm=0.9984709480122325
SEQF3572.1|JWFA01000052.1	CCTyper	CDS	45705	46712	336	+	.	ID=SEQF3572.1|JWFA01000052.1_52_cas;Genome_ID=SEQF3572.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=2.3e-79;Score=263.4;Coverage_Seq=0.9464285714285714;Coverage_Hmm=0.9936908517350158
SEQF3572.1|JWFA01000052.1	CCTyper	CDS	46709	47047	113	+	.	ID=SEQF3572.1|JWFA01000052.1_53_cas;Genome_ID=SEQF3572.1;Feature_type=CDS;Product=Cas Prediction : Cas2_2_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=4.4e-19;Score=65.2;Coverage_Seq=0.6194690265486725;Coverage_Hmm=0.8734177215189873
SEQF3572.1|JWFA01000052.1	CCTyper	CDS	47755	48486	244	+	.	ID=SEQF3572.1|JWFA01000052.1_54_cas;Genome_ID=SEQF3572.1;Feature_type=CDS;Product=Cas Prediction : Cas6_0_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=9.999999999999999e-27;Score=91.3;Coverage_Seq=0.7786885245901639;Coverage_Hmm=0.9072164948453608
SEQF3572.1|JWFA01000052.1	CCTyper	CDS	50717	51097	127	+	.	ID=SEQF3572.1|JWFA01000052.1_56_cas;Genome_ID=SEQF3572.1;Feature_type=CDS;Product=Cas Prediction : Csm2gr11_7_CAS-III-A;coding_strand=+;E-value=1.3e-22;Score=77.6;Coverage_Seq=0.9212598425196851;Coverage_Hmm=0.9818181818181818
SEQF3572.1|JWFA01000052.1	CCTyper	CDS	51097	51759	221	+	.	ID=SEQF3572.1|JWFA01000052.1_57_cas;Genome_ID=SEQF3572.1;Feature_type=CDS;Product=Cas Prediction : Csm3gr7_1_CAS-III-A-III-D;coding_strand=+;E-value=1.4e-71;Score=237.4;Coverage_Seq=0.9004524886877828;Coverage_Hmm=0.9627906976744186
SEQF3572.1|JWFA01000052.1	CCTyper	CDS	51761	52681	307	+	.	ID=SEQF3572.1|JWFA01000052.1_58_cas;Genome_ID=SEQF3572.1;Feature_type=CDS;Product=Cas Prediction : Csm4gr5_1_CAS-III-A;coding_strand=+;E-value=2.8999999999999996e-42;Score=141.7;Coverage_Seq=0.9869706840390879;Coverage_Hmm=0.9841269841269841
SEQF3572.1|JWFA01000052.1	CCTyper	CDS	52678	53763	362	+	.	ID=SEQF3572.1|JWFA01000052.1_59_cas;Genome_ID=SEQF3572.1;Feature_type=CDS;Product=Cas Prediction : Csm5gr7_0_CAS-III-A-III-D;coding_strand=+;E-value=4.2e-30;Score=101.9;Coverage_Seq=0.7513812154696132;Coverage_Hmm=0.7287671232876712
SEQF3572.1|JWFA01000052.1	CCTyper	CDS	53760	54920	387	+	.	ID=SEQF3572.1|JWFA01000052.1_60_cas;Genome_ID=SEQF3572.1;Feature_type=CDS;Product=Cas Prediction : Csm6_1_CAS-III;coding_strand=+;E-value=4.3e-79;Score=262.7;Coverage_Seq=0.8268733850129198;Coverage_Hmm=0.8944444444444445
SEQF3572.1|JWFA01000052.1	CCTyper	CDS	54937	55629	231	+	.	ID=SEQF3572.1|JWFA01000052.1_61_cas;Genome_ID=SEQF3572.1;Feature_type=CDS;Product=Cas Prediction : Csm6_1_CAS-III;coding_strand=+;E-value=3.1e-36;Score=121.7;Coverage_Seq=0.7489177489177489;Coverage_Hmm=0.4638888888888889
SEQF3572.1|JWFA01000052.1	CCTyper	CDS	55660	56226	189	+	.	ID=SEQF3572.1|JWFA01000052.1_62_cas;Genome_ID=SEQF3572.1;Feature_type=CDS;Product=Cas Prediction : Csm6_3_CAS-III;coding_strand=+;E-value=8.2e-45;Score=150.0;Coverage_Seq=0.9629629629629629;Coverage_Hmm=0.4973821989528796