SEQF3604.1|PKID01000005.1	CCTyper	repeat_region	123328	123890	563	+	.	ID=SEQF3604.1|PKID01000005.1_1;Genome_ID=SEQF3604.1;Note=Predictor:CCtyper;Start:123328;End:123890;Consensus_Repeat:GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Number_of_Repeats:9;Repeat_Length:36;Average_Spacer_Length:29.9;Repeat_Identity:100.0;Spacer_Identity:39.3;Spacer_Length_Sem:0.1;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.549;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3604.1|PKID01000005.1	CCTyper	direct_repeat	123328	123363	36	+	.	ID=SEQF3604.1|PKID01000005.1_1_REPEAT1;Parent=SEQF3604.1|PKID01000005.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3604.1|PKID01000005.1	CCTyper	binding_site	123364	123393	30	+	.	ID=SEQF3604.1|PKID01000005.1_1_SPACER1;Parent=SEQF3604.1|PKID01000005.1_1;Note=GACACGGAGAAAGACCCAGACGCAAAACCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3604.1|PKID01000005.1	CCTyper	direct_repeat	123394	123429	36	+	.	ID=SEQF3604.1|PKID01000005.1_1_REPEAT2;Parent=SEQF3604.1|PKID01000005.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3604.1|PKID01000005.1	CCTyper	binding_site	123430	123459	30	+	.	ID=SEQF3604.1|PKID01000005.1_1_SPACER2;Parent=SEQF3604.1|PKID01000005.1_1;Note=TGAGCTAGAACTCCAGGAGATCGCAGTTGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3604.1|PKID01000005.1	CCTyper	direct_repeat	123460	123495	36	+	.	ID=SEQF3604.1|PKID01000005.1_1_REPEAT3;Parent=SEQF3604.1|PKID01000005.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3604.1|PKID01000005.1	CCTyper	binding_site	123496	123525	30	+	.	ID=SEQF3604.1|PKID01000005.1_1_SPACER3;Parent=SEQF3604.1|PKID01000005.1_1;Note=AGTTGAAAGTGATGGAAATACTTTCTACCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3604.1|PKID01000005.1	CCTyper	direct_repeat	123526	123561	36	+	.	ID=SEQF3604.1|PKID01000005.1_1_REPEAT4;Parent=SEQF3604.1|PKID01000005.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3604.1|PKID01000005.1	CCTyper	binding_site	123562	123591	30	+	.	ID=SEQF3604.1|PKID01000005.1_1_SPACER4;Parent=SEQF3604.1|PKID01000005.1_1;Note=TATCTTAGATGAGTTTACAAATATCCCTGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3604.1|PKID01000005.1	CCTyper	direct_repeat	123592	123627	36	+	.	ID=SEQF3604.1|PKID01000005.1_1_REPEAT5;Parent=SEQF3604.1|PKID01000005.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3604.1|PKID01000005.1	CCTyper	binding_site	123628	123656	29	+	.	ID=SEQF3604.1|PKID01000005.1_1_SPACER5;Parent=SEQF3604.1|PKID01000005.1_1;Note=CGGAACATTGAAAAGCAAAAACAAGAGGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3604.1|PKID01000005.1	CCTyper	direct_repeat	123657	123692	36	+	.	ID=SEQF3604.1|PKID01000005.1_1_REPEAT6;Parent=SEQF3604.1|PKID01000005.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3604.1|PKID01000005.1	CCTyper	binding_site	123693	123722	30	+	.	ID=SEQF3604.1|PKID01000005.1_1_SPACER6;Parent=SEQF3604.1|PKID01000005.1_1;Note=CTTTTACAGCTATGACCATGAAAAAGCAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3604.1|PKID01000005.1	CCTyper	direct_repeat	123723	123758	36	+	.	ID=SEQF3604.1|PKID01000005.1_1_REPEAT7;Parent=SEQF3604.1|PKID01000005.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3604.1|PKID01000005.1	CCTyper	binding_site	123759	123788	30	+	.	ID=SEQF3604.1|PKID01000005.1_1_SPACER7;Parent=SEQF3604.1|PKID01000005.1_1;Note=AGTGCTTTTCCTATGTTTCCAGAGAATAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3604.1|PKID01000005.1	CCTyper	direct_repeat	123789	123824	36	+	.	ID=SEQF3604.1|PKID01000005.1_1_REPEAT8;Parent=SEQF3604.1|PKID01000005.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3604.1|PKID01000005.1	CCTyper	binding_site	123825	123854	30	+	.	ID=SEQF3604.1|PKID01000005.1_1_SPACER8;Parent=SEQF3604.1|PKID01000005.1_1;Note=CCCAGGGTCAGGGCTTCCGCTTTTACCGTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3604.1|PKID01000005.1	CCTyper	direct_repeat	123855	123890	36	+	.	ID=SEQF3604.1|PKID01000005.1_1_REPEAT9;Parent=SEQF3604.1|PKID01000005.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3604.1|PKID01000009.1	CCTyper	repeat_region	49028	49192	165	+	.	ID=SEQF3604.1|PKID01000009.1_2;Genome_ID=SEQF3604.1;Note=Predictor:CCtyper;Start:49028;End:49192;Consensus_Repeat:GTTTTTGTAGTCTCCAAAATTGTGACCGATAAAAC;Number_of_Repeats:3;Repeat_Length:35;Average_Spacer_Length:30.0;Repeat_Identity:100.0;Spacer_Identity:39.5;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:VI-A;Subtype_Probability:0.443;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3604.1|PKID01000009.1	CCTyper	direct_repeat	49028	49062	35	+	.	ID=SEQF3604.1|PKID01000009.1_2_REPEAT1;Parent=SEQF3604.1|PKID01000009.1_2;Note=GTTTTTGTAGTCTCCAAAATTGTGACCGATAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3604.1|PKID01000009.1	CCTyper	binding_site	49063	49092	30	+	.	ID=SEQF3604.1|PKID01000009.1_2_SPACER1;Parent=SEQF3604.1|PKID01000009.1_2;Note=TAAGACTTTTCCAGAACAATTACGGATGTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3604.1|PKID01000009.1	CCTyper	direct_repeat	49093	49127	35	+	.	ID=SEQF3604.1|PKID01000009.1_2_REPEAT2;Parent=SEQF3604.1|PKID01000009.1_2;Note=GTTTTTGTAGTCTCCAAAATTGTGACCGATAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3604.1|PKID01000009.1	CCTyper	binding_site	49128	49157	30	+	.	ID=SEQF3604.1|PKID01000009.1_2_SPACER2;Parent=SEQF3604.1|PKID01000009.1_2;Note=ACACAATCCGCTATTAAGGTGGGTTACTCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3604.1|PKID01000009.1	CCTyper	direct_repeat	49158	49192	35	+	.	ID=SEQF3604.1|PKID01000009.1_2_REPEAT3;Parent=SEQF3604.1|PKID01000009.1_2;Note=GTTTTTGTAGTCTCCAAAATTGTGACCGATAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3604.1|PKID01000005.1	CCTyper	OPERON	123981	130018	6038	-	.	ID=SEQF3604.1|PKID01000005.1@2;Genome_ID=SEQF3604.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Csn2_1_CAS-II-A,Cas2_5_CAS-I-II-III-IV-V-VI,Cas1_4_CAS-I-II-III-IV-V-VI,Cas9_1_II;Positions=130,131,132,133;E-values=4.40e-101,5.60e-50,1.50e-102,0.00e+00;CoverageSeq=0.982,0.939,0.931,0.994;CoverageHMM=0.995,0.957,0.996,0.998;Strand_Interference=-1;Strand_Adaptation=-1
SEQF3604.1|PKID01000005.1	CCTyper	CDS	124974	125840	289	-	.	ID=SEQF3604.1|PKID01000005.1_132_cas;Genome_ID=SEQF3604.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.5e-102;Score=339.2;Coverage_Seq=0.9307958477508651;Coverage_Hmm=0.9963636363636363
SEQF3604.1|PKID01000005.1	CCTyper	CDS	124633	124977	115	-	.	ID=SEQF3604.1|PKID01000005.1_131_cas;Genome_ID=SEQF3604.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=5.6e-50;Score=165.2;Coverage_Seq=0.9391304347826087;Coverage_Hmm=0.9568965517241379
SEQF3604.1|PKID01000005.1	CCTyper	CDS	125840	130018	1393	-	.	ID=SEQF3604.1|PKID01000005.1_133_cas;Genome_ID=SEQF3604.1;Feature_type=CDS;Product=Cas Prediction : Cas9_1_II;coding_strand=-;E-value=0.0;Score=1096.2;Coverage_Seq=0.994256999282125;Coverage_Hmm=0.9982142857142857
SEQF3604.1|PKID01000005.1	CCTyper	CDS	123981	124643	221	-	.	ID=SEQF3604.1|PKID01000005.1_130_cas;Genome_ID=SEQF3604.1;Feature_type=CDS;Product=Cas Prediction : Csn2_1_CAS-II-A;coding_strand=-;E-value=4.4000000000000004e-101;Score=333.8;Coverage_Seq=0.9819004524886877;Coverage_Hmm=0.9954128440366973