SEQF3606.1|RJNH01000012.1	CCTyper	repeat_region	12386	14712	2327	+	.	ID=SEQF3606.1|RJNH01000012.1_1;Genome_ID=SEQF3606.1;Note=Predictor:CCtyper;Start:12386;End:14712;Consensus_Repeat:GTATAAGAACCTATCTACCTCGAGAGGGGACGGAAAC;Number_of_Repeats:32;Repeat_Length:37;Average_Spacer_Length:36.9;Repeat_Identity:83.0;Spacer_Identity:43.3;Spacer_Length_Sem:0.6;Trusted:True;Cas_Type_Prediction: III-A;Cas_Subtype_Prediction:III-A;Subtype_Probability:0.995;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	direct_repeat	12386	12422	37	+	.	ID=SEQF3606.1|RJNH01000012.1_1_REPEAT1;Parent=SEQF3606.1|RJNH01000012.1_1;Note=GTATAAGAACCTATCCACCTCGAGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	binding_site	12423	12455	33	+	.	ID=SEQF3606.1|RJNH01000012.1_1_SPACER1;Parent=SEQF3606.1|RJNH01000012.1_1;Note=CCAATTCTACCACTTTGCAAGTTGTAGTTAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	direct_repeat	12456	12492	37	+	.	ID=SEQF3606.1|RJNH01000012.1_1_REPEAT2;Parent=SEQF3606.1|RJNH01000012.1_1;Note=GTATAAGAACCTATCCACCTCGAAAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	binding_site	12493	12533	41	+	.	ID=SEQF3606.1|RJNH01000012.1_1_SPACER2;Parent=SEQF3606.1|RJNH01000012.1_1;Note=TGAGTCGGAGAGTTACTTTCTTCAAATCCAGGGATCGAACG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	direct_repeat	12534	12570	37	+	.	ID=SEQF3606.1|RJNH01000012.1_1_REPEAT3;Parent=SEQF3606.1|RJNH01000012.1_1;Note=GTATAAGAACCTATCTACCTCGAGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	binding_site	12571	12604	34	+	.	ID=SEQF3606.1|RJNH01000012.1_1_SPACER3;Parent=SEQF3606.1|RJNH01000012.1_1;Note=CCATTGCTTGCCATTCTGCGAGTTGTTCTTCAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	direct_repeat	12605	12641	37	+	.	ID=SEQF3606.1|RJNH01000012.1_1_REPEAT4;Parent=SEQF3606.1|RJNH01000012.1_1;Note=GTATAAGAACCTATCTACCTCGAGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	binding_site	12642	12686	45	+	.	ID=SEQF3606.1|RJNH01000012.1_1_SPACER4;Parent=SEQF3606.1|RJNH01000012.1_1;Note=ATTCGTTCCATACTAATTTTGTCAATACTCATTTAAGATACCTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	direct_repeat	12687	12723	37	+	.	ID=SEQF3606.1|RJNH01000012.1_1_REPEAT5;Parent=SEQF3606.1|RJNH01000012.1_1;Note=GTAAGACAACCTATCCACCTCGCGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	binding_site	12724	12758	35	+	.	ID=SEQF3606.1|RJNH01000012.1_1_SPACER5;Parent=SEQF3606.1|RJNH01000012.1_1;Note=CCAGTAACCCAAGAACTTTCCTCCGCAGACTTCAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	direct_repeat	12759	12795	37	+	.	ID=SEQF3606.1|RJNH01000012.1_1_REPEAT6;Parent=SEQF3606.1|RJNH01000012.1_1;Note=GTAAAACAACCTATTCACCTCGCGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	binding_site	12796	12830	35	+	.	ID=SEQF3606.1|RJNH01000012.1_1_SPACER6;Parent=SEQF3606.1|RJNH01000012.1_1;Note=CATTTACATAATAAATGGGACGATCAAATACATCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	direct_repeat	12831	12867	37	+	.	ID=SEQF3606.1|RJNH01000012.1_1_REPEAT7;Parent=SEQF3606.1|RJNH01000012.1_1;Note=GTAAAACAATCTATTCACCTCGAGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	binding_site	12868	12903	36	+	.	ID=SEQF3606.1|RJNH01000012.1_1_SPACER7;Parent=SEQF3606.1|RJNH01000012.1_1;Note=TTCCCAATCAAGTCTTTTAGTTCCGCCATTCTATCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	direct_repeat	12904	12940	37	+	.	ID=SEQF3606.1|RJNH01000012.1_1_REPEAT8;Parent=SEQF3606.1|RJNH01000012.1_1;Note=GTTTAAGAACCTATCTACCTTGAGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	binding_site	12941	12973	33	+	.	ID=SEQF3606.1|RJNH01000012.1_1_SPACER8;Parent=SEQF3606.1|RJNH01000012.1_1;Note=TATAGTGCATGATTTGTCCTCCTAGGGCAGATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	direct_repeat	12974	13010	37	+	.	ID=SEQF3606.1|RJNH01000012.1_1_REPEAT9;Parent=SEQF3606.1|RJNH01000012.1_1;Note=GTATAGCCACCTATCTACCTCGAGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	binding_site	13011	13048	38	+	.	ID=SEQF3606.1|RJNH01000012.1_1_SPACER9;Parent=SEQF3606.1|RJNH01000012.1_1;Note=CACATAGTCTACTGCTTCTTTTGAACGTTCATTGCTGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	direct_repeat	13049	13085	37	+	.	ID=SEQF3606.1|RJNH01000012.1_1_REPEAT10;Parent=SEQF3606.1|RJNH01000012.1_1;Note=GTATAAGAACCTATCTACCTCTCTAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	binding_site	13086	13118	33	+	.	ID=SEQF3606.1|RJNH01000012.1_1_SPACER10;Parent=SEQF3606.1|RJNH01000012.1_1;Note=AATATTGTTCCTCCTATAATTTTATTTCATTAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	direct_repeat	13119	13155	37	+	.	ID=SEQF3606.1|RJNH01000012.1_1_REPEAT11;Parent=SEQF3606.1|RJNH01000012.1_1;Note=GTATAAGAACCTATCTACCTCGCTAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	binding_site	13156	13192	37	+	.	ID=SEQF3606.1|RJNH01000012.1_1_SPACER11;Parent=SEQF3606.1|RJNH01000012.1_1;Note=TTACATGAGCCATCAAAGGCCCAATAATCTTGTTCAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	direct_repeat	13193	13229	37	+	.	ID=SEQF3606.1|RJNH01000012.1_1_REPEAT12;Parent=SEQF3606.1|RJNH01000012.1_1;Note=GTATAAGAATCTATCCACCTCGCTAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	binding_site	13230	13267	38	+	.	ID=SEQF3606.1|RJNH01000012.1_1_SPACER12;Parent=SEQF3606.1|RJNH01000012.1_1;Note=ATAAATTTACCAGTTGTGATTTCTTTTACTTCACCTGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	direct_repeat	13268	13304	37	+	.	ID=SEQF3606.1|RJNH01000012.1_1_REPEAT13;Parent=SEQF3606.1|RJNH01000012.1_1;Note=GTATAAGAACCTATCTACCTCGAGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	binding_site	13305	13341	37	+	.	ID=SEQF3606.1|RJNH01000012.1_1_SPACER13;Parent=SEQF3606.1|RJNH01000012.1_1;Note=GTCTCAAGTTCAAATTCTACTTTAAAGAAATTTTTGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	direct_repeat	13342	13378	37	+	.	ID=SEQF3606.1|RJNH01000012.1_1_REPEAT14;Parent=SEQF3606.1|RJNH01000012.1_1;Note=GTATAAGAACCTATCTACCTCGAGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	binding_site	13379	13417	39	+	.	ID=SEQF3606.1|RJNH01000012.1_1_SPACER14;Parent=SEQF3606.1|RJNH01000012.1_1;Note=TAGACCTAGCGATAGCATCATCAATGGATGCCGGGGATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	direct_repeat	13418	13454	37	+	.	ID=SEQF3606.1|RJNH01000012.1_1_REPEAT15;Parent=SEQF3606.1|RJNH01000012.1_1;Note=GTATAAGAACCTATCCACCTCGAGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	binding_site	13455	13502	48	+	.	ID=SEQF3606.1|RJNH01000012.1_1_SPACER15;Parent=SEQF3606.1|RJNH01000012.1_1;Note=ACCATTTAATTTTGTTGTATTAAAATCCATCTTCATTTTCATGTATAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	direct_repeat	13503	13539	37	+	.	ID=SEQF3606.1|RJNH01000012.1_1_REPEAT16;Parent=SEQF3606.1|RJNH01000012.1_1;Note=GTATAAGAACCTATCTACCTCGAGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	binding_site	13540	13577	38	+	.	ID=SEQF3606.1|RJNH01000012.1_1_SPACER16;Parent=SEQF3606.1|RJNH01000012.1_1;Note=GTTTTATTTACTCCACAACAATCAATTTTCTACAATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	direct_repeat	13578	13614	37	+	.	ID=SEQF3606.1|RJNH01000012.1_1_REPEAT17;Parent=SEQF3606.1|RJNH01000012.1_1;Note=GTATAAGAACCTATCTACCTCGAGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	binding_site	13615	13652	38	+	.	ID=SEQF3606.1|RJNH01000012.1_1_SPACER17;Parent=SEQF3606.1|RJNH01000012.1_1;Note=GAAAATTCTTCGTTAGGTTCTAAAAAATTCAATAGTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	direct_repeat	13653	13689	37	+	.	ID=SEQF3606.1|RJNH01000012.1_1_REPEAT18;Parent=SEQF3606.1|RJNH01000012.1_1;Note=GTAAAACAACCTATTCACCTCGAGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	binding_site	13690	13725	36	+	.	ID=SEQF3606.1|RJNH01000012.1_1_SPACER18;Parent=SEQF3606.1|RJNH01000012.1_1;Note=TCCGGAGAAGCACCTTTTGACTATTCATTTAAGTCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	direct_repeat	13726	13762	37	+	.	ID=SEQF3606.1|RJNH01000012.1_1_REPEAT19;Parent=SEQF3606.1|RJNH01000012.1_1;Note=GTATAAGAACCTATCCACCTCGCGAGGGGCCGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	binding_site	13763	13794	32	+	.	ID=SEQF3606.1|RJNH01000012.1_1_SPACER19;Parent=SEQF3606.1|RJNH01000012.1_1;Note=AGAGGGTGGAAAATATATGGGTCTCCATTTCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	direct_repeat	13795	13831	37	+	.	ID=SEQF3606.1|RJNH01000012.1_1_REPEAT20;Parent=SEQF3606.1|RJNH01000012.1_1;Note=ATAGAACAACCTATTTACCTCGAGAGGGGCCGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	binding_site	13832	13867	36	+	.	ID=SEQF3606.1|RJNH01000012.1_1_SPACER20;Parent=SEQF3606.1|RJNH01000012.1_1;Note=ACCCAGCCGAATCCAGCTTGTTCTAGTTCTTTGCGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	direct_repeat	13868	13904	37	+	.	ID=SEQF3606.1|RJNH01000012.1_1_REPEAT21;Parent=SEQF3606.1|RJNH01000012.1_1;Note=GAATAGGTACTTATCAACCTCGGTAGGGGCCGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	binding_site	13905	13941	37	+	.	ID=SEQF3606.1|RJNH01000012.1_1_SPACER21;Parent=SEQF3606.1|RJNH01000012.1_1;Note=CAGTTCCAGTATACACGTTGATTTTTTGAGTACGCTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	direct_repeat	13942	13978	37	+	.	ID=SEQF3606.1|RJNH01000012.1_1_REPEAT22;Parent=SEQF3606.1|RJNH01000012.1_1;Note=GTATAGCTACCTATCTACCTCGCGAGGGGCCGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	binding_site	13979	14014	36	+	.	ID=SEQF3606.1|RJNH01000012.1_1_SPACER22;Parent=SEQF3606.1|RJNH01000012.1_1;Note=TTGCAGACCGACGCCTTAGCCATTCAGCCAATCCGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	direct_repeat	14015	14051	37	+	.	ID=SEQF3606.1|RJNH01000012.1_1_REPEAT23;Parent=SEQF3606.1|RJNH01000012.1_1;Note=GTAAAACACCCTATTACCCCCTCGAGGGGCCGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	binding_site	14052	14087	36	+	.	ID=SEQF3606.1|RJNH01000012.1_1_SPACER23;Parent=SEQF3606.1|RJNH01000012.1_1;Note=AGGCTTCCTTATGCTTTTTTACAAAGTCATTGATGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	direct_repeat	14088	14124	37	+	.	ID=SEQF3606.1|RJNH01000012.1_1_REPEAT24;Parent=SEQF3606.1|RJNH01000012.1_1;Note=GTATAGCTACCTATCTACCTCGCGAGGGGCCGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	binding_site	14125	14157	33	+	.	ID=SEQF3606.1|RJNH01000012.1_1_SPACER24;Parent=SEQF3606.1|RJNH01000012.1_1;Note=TGATTGTATGTGCAATACTGATGTGTCTTGATG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	direct_repeat	14158	14194	37	+	.	ID=SEQF3606.1|RJNH01000012.1_1_REPEAT25;Parent=SEQF3606.1|RJNH01000012.1_1;Note=GTATAGAACCCTATTTACCTCGCGAGAGGCCGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	binding_site	14195	14228	34	+	.	ID=SEQF3606.1|RJNH01000012.1_1_SPACER25;Parent=SEQF3606.1|RJNH01000012.1_1;Note=CTTCCCTGTTGCCGTTTTAAAGCTAGGGTTATCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	direct_repeat	14229	14265	37	+	.	ID=SEQF3606.1|RJNH01000012.1_1_REPEAT26;Parent=SEQF3606.1|RJNH01000012.1_1;Note=GTATAGCTACCTATCTACCTCGCGAGGGGCCGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	binding_site	14266	14299	34	+	.	ID=SEQF3606.1|RJNH01000012.1_1_SPACER26;Parent=SEQF3606.1|RJNH01000012.1_1;Note=CACGCTCTAAATTTTGGAATCATCCCAAATCCTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	direct_repeat	14300	14336	37	+	.	ID=SEQF3606.1|RJNH01000012.1_1_REPEAT27;Parent=SEQF3606.1|RJNH01000012.1_1;Note=GTATAGCTACCTATCAACCTCGAGAGGGGCCGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	binding_site	14337	14375	39	+	.	ID=SEQF3606.1|RJNH01000012.1_1_SPACER27;Parent=SEQF3606.1|RJNH01000012.1_1;Note=CGTGTAATTCTTTCTGAAGTTGTTTGATTTTTTTGATTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	direct_repeat	14376	14412	37	+	.	ID=SEQF3606.1|RJNH01000012.1_1_REPEAT28;Parent=SEQF3606.1|RJNH01000012.1_1;Note=GTATAGATACCTACCTACCTCGCGAGGGGCCGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	binding_site	14413	14447	35	+	.	ID=SEQF3606.1|RJNH01000012.1_1_SPACER28;Parent=SEQF3606.1|RJNH01000012.1_1;Note=ATAGATGGGAAGTATTCAAAATCAGCGTTTCCATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	direct_repeat	14448	14484	37	+	.	ID=SEQF3606.1|RJNH01000012.1_1_REPEAT29;Parent=SEQF3606.1|RJNH01000012.1_1;Note=GTATAGATATCTATCTACCTCGAAAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	binding_site	14485	14521	37	+	.	ID=SEQF3606.1|RJNH01000012.1_1_SPACER29;Parent=SEQF3606.1|RJNH01000012.1_1;Note=AGAATTGCTAAAAGGGTCATAATGTAAGACGTAATAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	direct_repeat	14522	14558	37	+	.	ID=SEQF3606.1|RJNH01000012.1_1_REPEAT30;Parent=SEQF3606.1|RJNH01000012.1_1;Note=GTATAGATACCTATCTACCTCGAGACGGGATGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	binding_site	14559	14597	39	+	.	ID=SEQF3606.1|RJNH01000012.1_1_SPACER30;Parent=SEQF3606.1|RJNH01000012.1_1;Note=TTTATTACCGCAGCAGTAAGGGATGTCAAACCTGTAACG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	direct_repeat	14598	14634	37	+	.	ID=SEQF3606.1|RJNH01000012.1_1_REPEAT31;Parent=SEQF3606.1|RJNH01000012.1_1;Note=GTATAGACACCTATCTACCTCGAGAGGGGTCGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	binding_site	14635	14675	41	+	.	ID=SEQF3606.1|RJNH01000012.1_1_SPACER31;Parent=SEQF3606.1|RJNH01000012.1_1;Note=TGTCCATTGACAATATTGACAAAAGTATTCTCAACTTCTCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	direct_repeat	14676	14712	37	+	.	ID=SEQF3606.1|RJNH01000012.1_1_REPEAT32;Parent=SEQF3606.1|RJNH01000012.1_1;Note=GTATAGCTACCTATCTACCTCGAGAGGGGACAGTTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3606.1|RJNH01000012.1	CCTyper	OPERON	6936	23235	16300	+	.	ID=SEQF3606.1|RJNH01000012.1@1;Genome_ID=SEQF3606.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type III-A;Complete_Interference=100%;Complete_Adaptation=NA;Best_type=III-A;Best_score=19.0;Genes=AbiEii_0_CAS-III,Cas1_0_CAS-I-II-III-IV-V-VI,Cas2_2_CAS-I-II-III-IV-V-VI,Cas6_0_CAS-I-II-III-IV-V-VI,Cas10_1_CAS-III,Csm2gr11_7_CAS-III-A,Csm3gr7_1_CAS-III-A-III-D,Csm4gr5_1_CAS-III-A,Csm5gr7_0_CAS-III-A-III-D,Csm6_1_CAS-III,Csm6_1_CAS-III;Positions=9,13,15,16,17,18,19,20,21,22,23;E-values=1.10e-04,1.80e-31,6.90e-20,4.70e-28,3.20e-161,2.40e-23,3.80e-73,2.20e-40,2.30e-31,6.40e-72,1.20e-84;CoverageSeq=0.316,0.866,0.627,0.791,0.866,0.921,0.919,0.987,0.786,0.832,0.858;CoverageHMM=0.415,0.508,0.861,0.912,1.0,0.982,0.981,0.984,0.77,0.9,0.983;Strand_Interference=1;Strand_Adaptation=NA
SEQF3606.1|RJNH01000012.1	CCTyper	CDS	6936	8093	386	+	.	ID=SEQF3606.1|RJNH01000012.1_9_cas;Genome_ID=SEQF3606.1;Feature_type=CDS;Product=Cas Prediction : AbiEii_0_CAS-III;coding_strand=+;E-value=0.00011;Score=18.8;Coverage_Seq=0.3160621761658031;Coverage_Hmm=0.4154929577464789
SEQF3606.1|RJNH01000012.1	CCTyper	CDS	15507	17750	748	+	.	ID=SEQF3606.1|RJNH01000012.1_17_cas;Genome_ID=SEQF3606.1;Feature_type=CDS;Product=Cas Prediction : Cas10_1_CAS-III;coding_strand=+;E-value=3.2000000000000002e-161;Score=535.1;Coverage_Seq=0.8663101604278075;Coverage_Hmm=1.0
SEQF3606.1|RJNH01000012.1	CCTyper	CDS	10850	11410	187	+	.	ID=SEQF3606.1|RJNH01000012.1_13_cas;Genome_ID=SEQF3606.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.7999999999999998e-31;Score=106.3;Coverage_Seq=0.8663101604278075;Coverage_Hmm=0.5078864353312302
SEQF3606.1|RJNH01000012.1	CCTyper	CDS	11963	12292	110	+	.	ID=SEQF3606.1|RJNH01000012.1_15_cas;Genome_ID=SEQF3606.1;Feature_type=CDS;Product=Cas Prediction : Cas2_2_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=6.9e-20;Score=68.1;Coverage_Seq=0.6272727272727273;Coverage_Hmm=0.8607594936708861
SEQF3606.1|RJNH01000012.1	CCTyper	CDS	14795	15526	244	+	.	ID=SEQF3606.1|RJNH01000012.1_16_cas;Genome_ID=SEQF3606.1;Feature_type=CDS;Product=Cas Prediction : Cas6_0_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=4.7000000000000005e-28;Score=95.9;Coverage_Seq=0.7909836065573771;Coverage_Hmm=0.9123711340206185
SEQF3606.1|RJNH01000012.1	CCTyper	CDS	17751	18131	127	+	.	ID=SEQF3606.1|RJNH01000012.1_18_cas;Genome_ID=SEQF3606.1;Feature_type=CDS;Product=Cas Prediction : Csm2gr11_7_CAS-III-A;coding_strand=+;E-value=2.4e-23;Score=80.3;Coverage_Seq=0.9212598425196851;Coverage_Hmm=0.9818181818181818
SEQF3606.1|RJNH01000012.1	CCTyper	CDS	18131	18793	221	+	.	ID=SEQF3606.1|RJNH01000012.1_19_cas;Genome_ID=SEQF3606.1;Feature_type=CDS;Product=Cas Prediction : Csm3gr7_1_CAS-III-A-III-D;coding_strand=+;E-value=3.8e-73;Score=242.8;Coverage_Seq=0.918552036199095;Coverage_Hmm=0.9813953488372092
SEQF3606.1|RJNH01000012.1	CCTyper	CDS	18795	19700	302	+	.	ID=SEQF3606.1|RJNH01000012.1_20_cas;Genome_ID=SEQF3606.1;Feature_type=CDS;Product=Cas Prediction : Csm4gr5_1_CAS-III-A;coding_strand=+;E-value=2.2e-40;Score=135.8;Coverage_Seq=0.9867549668874173;Coverage_Hmm=0.9841269841269841
SEQF3606.1|RJNH01000012.1	CCTyper	CDS	19697	20776	360	+	.	ID=SEQF3606.1|RJNH01000012.1_21_cas;Genome_ID=SEQF3606.1;Feature_type=CDS;Product=Cas Prediction : Csm5gr7_0_CAS-III-A-III-D;coding_strand=+;E-value=2.3e-31;Score=106.3;Coverage_Seq=0.7861111111111111;Coverage_Hmm=0.7698630136986301
SEQF3606.1|RJNH01000012.1	CCTyper	CDS	20773	21933	387	+	.	ID=SEQF3606.1|RJNH01000012.1_22_cas;Genome_ID=SEQF3606.1;Feature_type=CDS;Product=Cas Prediction : Csm6_1_CAS-III;coding_strand=+;E-value=6.4e-72;Score=239.4;Coverage_Seq=0.8320413436692506;Coverage_Hmm=0.9
SEQF3606.1|RJNH01000012.1	CCTyper	CDS	21946	23235	430	+	.	ID=SEQF3606.1|RJNH01000012.1_23_cas;Genome_ID=SEQF3606.1;Feature_type=CDS;Product=Cas Prediction : Csm6_1_CAS-III;coding_strand=+;E-value=1.2e-84;Score=281.3;Coverage_Seq=0.858139534883721;Coverage_Hmm=0.9833333333333333