SEQF3615.1|RJOC01000007.1	CCTyper	repeat_region	82990	83818	829	+	.	ID=SEQF3615.1|RJOC01000007.1_1;Genome_ID=SEQF3615.1;Note=Predictor:CCtyper;Start:82990;End:83818;Consensus_Repeat:GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Number_of_Repeats:13;Repeat_Length:36;Average_Spacer_Length:30.1;Repeat_Identity:97.9;Spacer_Identity:41.8;Spacer_Length_Sem:0.1;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.549;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3615.1|RJOC01000007.1	CCTyper	direct_repeat	82990	83025	36	+	.	ID=SEQF3615.1|RJOC01000007.1_1_REPEAT1;Parent=SEQF3615.1|RJOC01000007.1_1;Note=GAGTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3615.1|RJOC01000007.1	CCTyper	binding_site	83026	83055	30	+	.	ID=SEQF3615.1|RJOC01000007.1_1_SPACER1;Parent=SEQF3615.1|RJOC01000007.1_1;Note=TCCGTTTGAAAAATGGATTTATAAGATTCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3615.1|RJOC01000007.1	CCTyper	direct_repeat	83056	83091	36	+	.	ID=SEQF3615.1|RJOC01000007.1_1_REPEAT2;Parent=SEQF3615.1|RJOC01000007.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3615.1|RJOC01000007.1	CCTyper	binding_site	83092	83121	30	+	.	ID=SEQF3615.1|RJOC01000007.1_1_SPACER2;Parent=SEQF3615.1|RJOC01000007.1_1;Note=ATGGCAAAGGGACAAAAACGGGCAAAGAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3615.1|RJOC01000007.1	CCTyper	direct_repeat	83122	83157	36	+	.	ID=SEQF3615.1|RJOC01000007.1_1_REPEAT3;Parent=SEQF3615.1|RJOC01000007.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3615.1|RJOC01000007.1	CCTyper	binding_site	83158	83187	30	+	.	ID=SEQF3615.1|RJOC01000007.1_1_SPACER3;Parent=SEQF3615.1|RJOC01000007.1_1;Note=ATGTATATGGACAACTTGATTTGACTCTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3615.1|RJOC01000007.1	CCTyper	direct_repeat	83188	83223	36	+	.	ID=SEQF3615.1|RJOC01000007.1_1_REPEAT4;Parent=SEQF3615.1|RJOC01000007.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3615.1|RJOC01000007.1	CCTyper	binding_site	83224	83253	30	+	.	ID=SEQF3615.1|RJOC01000007.1_1_SPACER4;Parent=SEQF3615.1|RJOC01000007.1_1;Note=TTGAAGGCCTCCGAATTGATAAGTAACAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3615.1|RJOC01000007.1	CCTyper	direct_repeat	83254	83289	36	+	.	ID=SEQF3615.1|RJOC01000007.1_1_REPEAT5;Parent=SEQF3615.1|RJOC01000007.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3615.1|RJOC01000007.1	CCTyper	binding_site	83290	83319	30	+	.	ID=SEQF3615.1|RJOC01000007.1_1_SPACER5;Parent=SEQF3615.1|RJOC01000007.1_1;Note=TAAACAAAGTATATAAATTTGCCGAAGTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3615.1|RJOC01000007.1	CCTyper	direct_repeat	83320	83355	36	+	.	ID=SEQF3615.1|RJOC01000007.1_1_REPEAT6;Parent=SEQF3615.1|RJOC01000007.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3615.1|RJOC01000007.1	CCTyper	binding_site	83356	83385	30	+	.	ID=SEQF3615.1|RJOC01000007.1_1_SPACER6;Parent=SEQF3615.1|RJOC01000007.1_1;Note=CTGCTATTATGTCTTACAAATCCAGGTCCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3615.1|RJOC01000007.1	CCTyper	direct_repeat	83386	83421	36	+	.	ID=SEQF3615.1|RJOC01000007.1_1_REPEAT7;Parent=SEQF3615.1|RJOC01000007.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3615.1|RJOC01000007.1	CCTyper	binding_site	83422	83451	30	+	.	ID=SEQF3615.1|RJOC01000007.1_1_SPACER7;Parent=SEQF3615.1|RJOC01000007.1_1;Note=TAAGAATCTTGCAATTCTTTATCGTTAAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3615.1|RJOC01000007.1	CCTyper	direct_repeat	83452	83487	36	+	.	ID=SEQF3615.1|RJOC01000007.1_1_REPEAT8;Parent=SEQF3615.1|RJOC01000007.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3615.1|RJOC01000007.1	CCTyper	binding_site	83488	83517	30	+	.	ID=SEQF3615.1|RJOC01000007.1_1_SPACER8;Parent=SEQF3615.1|RJOC01000007.1_1;Note=TGTTACGATGAGGATGCGCCTTGATCGTGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3615.1|RJOC01000007.1	CCTyper	direct_repeat	83518	83553	36	+	.	ID=SEQF3615.1|RJOC01000007.1_1_REPEAT9;Parent=SEQF3615.1|RJOC01000007.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3615.1|RJOC01000007.1	CCTyper	binding_site	83554	83584	31	+	.	ID=SEQF3615.1|RJOC01000007.1_1_SPACER9;Parent=SEQF3615.1|RJOC01000007.1_1;Note=CCCAATGATCCGTATAAACACCGACAGGTGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3615.1|RJOC01000007.1	CCTyper	direct_repeat	83585	83620	36	+	.	ID=SEQF3615.1|RJOC01000007.1_1_REPEAT10;Parent=SEQF3615.1|RJOC01000007.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3615.1|RJOC01000007.1	CCTyper	binding_site	83621	83650	30	+	.	ID=SEQF3615.1|RJOC01000007.1_1_SPACER10;Parent=SEQF3615.1|RJOC01000007.1_1;Note=TGTTTTCCATGAGCACTTGCCCAAAATTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3615.1|RJOC01000007.1	CCTyper	direct_repeat	83651	83686	36	+	.	ID=SEQF3615.1|RJOC01000007.1_1_REPEAT11;Parent=SEQF3615.1|RJOC01000007.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3615.1|RJOC01000007.1	CCTyper	binding_site	83687	83716	30	+	.	ID=SEQF3615.1|RJOC01000007.1_1_SPACER11;Parent=SEQF3615.1|RJOC01000007.1_1;Note=TCAAATACGAATCAGTTCCACTCTAGCACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3615.1|RJOC01000007.1	CCTyper	direct_repeat	83717	83752	36	+	.	ID=SEQF3615.1|RJOC01000007.1_1_REPEAT12;Parent=SEQF3615.1|RJOC01000007.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3615.1|RJOC01000007.1	CCTyper	binding_site	83753	83782	30	+	.	ID=SEQF3615.1|RJOC01000007.1_1_SPACER12;Parent=SEQF3615.1|RJOC01000007.1_1;Note=AGATTATCAGCAAGTCCTCCTGCTGAATCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3615.1|RJOC01000007.1	CCTyper	direct_repeat	83783	83818	36	+	.	ID=SEQF3615.1|RJOC01000007.1_1_REPEAT13;Parent=SEQF3615.1|RJOC01000007.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3615.1|RJOC01000007.1	CCTyper	OPERON	83909	89946	6038	-	.	ID=SEQF3615.1|RJOC01000007.1@2;Genome_ID=SEQF3615.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Csn2_1_CAS-II-A,Cas2_5_CAS-I-II-III-IV-V-VI,Cas1_4_CAS-I-II-III-IV-V-VI,Cas9_1_II;Positions=85,86,87,88;E-values=3.70e-100,2.70e-50,2.90e-103,0.00e+00;CoverageSeq=0.982,0.948,0.931,0.994;CoverageHMM=0.995,0.966,0.996,0.998;Strand_Interference=-1;Strand_Adaptation=-1
SEQF3615.1|RJOC01000007.1	CCTyper	CDS	84902	85768	289	-	.	ID=SEQF3615.1|RJOC01000007.1_87_cas;Genome_ID=SEQF3615.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=2.9e-103;Score=341.5;Coverage_Seq=0.9307958477508651;Coverage_Hmm=0.9963636363636363
SEQF3615.1|RJOC01000007.1	CCTyper	CDS	84561	84905	115	-	.	ID=SEQF3615.1|RJOC01000007.1_86_cas;Genome_ID=SEQF3615.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=2.7e-50;Score=166.2;Coverage_Seq=0.9478260869565217;Coverage_Hmm=0.9655172413793104
SEQF3615.1|RJOC01000007.1	CCTyper	CDS	85768	89946	1393	-	.	ID=SEQF3615.1|RJOC01000007.1_88_cas;Genome_ID=SEQF3615.1;Feature_type=CDS;Product=Cas Prediction : Cas9_1_II;coding_strand=-;E-value=0.0;Score=1101.8;Coverage_Seq=0.994256999282125;Coverage_Hmm=0.9982142857142857
SEQF3615.1|RJOC01000007.1	CCTyper	CDS	83909	84571	221	-	.	ID=SEQF3615.1|RJOC01000007.1_85_cas;Genome_ID=SEQF3615.1;Feature_type=CDS;Product=Cas Prediction : Csn2_1_CAS-II-A;coding_strand=-;E-value=3.7e-100;Score=330.7;Coverage_Seq=0.9819004524886877;Coverage_Hmm=0.9954128440366973