SEQF3617.1|RJOE01000001.1	CCTyper	repeat_region	87814	88044	231	+	.	ID=SEQF3617.1|RJOE01000001.1_1;Genome_ID=SEQF3617.1;Note=Predictor:CCtyper;Start:87814;End:88044;Consensus_Repeat:GTTTTATCGGTCATAATTTTGGAGACTACAAAAAC;Number_of_Repeats:4;Repeat_Length:35;Average_Spacer_Length:30.3;Repeat_Identity:97.2;Spacer_Identity:42.3;Spacer_Length_Sem:0.3;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.904;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000001.1	CCTyper	direct_repeat	87814	87848	35	+	.	ID=SEQF3617.1|RJOE01000001.1_1_REPEAT1;Parent=SEQF3617.1|RJOE01000001.1_1;Note=GTTTTATCGGTCACAATTTTGGAGACTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000001.1	CCTyper	binding_site	87849	87878	30	+	.	ID=SEQF3617.1|RJOE01000001.1_1_SPACER1;Parent=SEQF3617.1|RJOE01000001.1_1;Note=CAAGCCGTCAGGGTATGTCTTAATCATTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000001.1	CCTyper	direct_repeat	87879	87913	35	+	.	ID=SEQF3617.1|RJOE01000001.1_1_REPEAT2;Parent=SEQF3617.1|RJOE01000001.1_1;Note=GTTTTATCGGTCATAATTTTGGAGACTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000001.1	CCTyper	binding_site	87914	87943	30	+	.	ID=SEQF3617.1|RJOE01000001.1_1_SPACER2;Parent=SEQF3617.1|RJOE01000001.1_1;Note=TATCGCCAGCTGCGCCGAAAAACTAGGACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000001.1	CCTyper	direct_repeat	87944	87978	35	+	.	ID=SEQF3617.1|RJOE01000001.1_1_REPEAT3;Parent=SEQF3617.1|RJOE01000001.1_1;Note=GTTTTATCGGTCATAATTTTGGAGACTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000001.1	CCTyper	binding_site	87979	88009	31	+	.	ID=SEQF3617.1|RJOE01000001.1_1_SPACER3;Parent=SEQF3617.1|RJOE01000001.1_1;Note=TCTTTATCAGCGAGCAAGACAATCTCGCTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000001.1	CCTyper	direct_repeat	88010	88044	35	+	.	ID=SEQF3617.1|RJOE01000001.1_1_REPEAT4;Parent=SEQF3617.1|RJOE01000001.1_1;Note=GTTTTATCGGTCATAATTTTGGAGACTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000012.1	CCTyper	repeat_region	8954	9891	938	+	.	ID=SEQF3617.1|RJOE01000012.1_2;Genome_ID=SEQF3617.1;Note=Predictor:CCtyper;Start:8954;End:9891;Consensus_Repeat:GTTATACCTTACCTATAAGGAATTGAGAC;Number_of_Repeats:13;Repeat_Length:29;Average_Spacer_Length:46.8;Repeat_Identity:89.0;Spacer_Identity:42.9;Spacer_Length_Sem:2.1;Trusted:True;Cas_Type_Prediction: III-B;Cas_Subtype_Prediction:III-B;Subtype_Probability:0.991;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000012.1	CCTyper	direct_repeat	8954	8982	29	+	.	ID=SEQF3617.1|RJOE01000012.1_2_REPEAT1;Parent=SEQF3617.1|RJOE01000012.1_2;Note=GTTATACCTTACCTATAAGGAATTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000012.1	CCTyper	binding_site	8983	9025	43	+	.	ID=SEQF3617.1|RJOE01000012.1_2_SPACER1;Parent=SEQF3617.1|RJOE01000012.1_2;Note=GTTGCTTCCTACAACAAAAGCCAGAACCTCAATTCGTGATTCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000012.1	CCTyper	direct_repeat	9026	9054	29	+	.	ID=SEQF3617.1|RJOE01000012.1_2_REPEAT2;Parent=SEQF3617.1|RJOE01000012.1_2;Note=GTTATACCTTACCTATAAGGAATTGAGAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000012.1	CCTyper	binding_site	9055	9101	47	+	.	ID=SEQF3617.1|RJOE01000012.1_2_SPACER2;Parent=SEQF3617.1|RJOE01000012.1_2;Note=TTGACTGTCTCCTATGAGACTTTTTAATTTCTCCCAGCAGCTCTTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000012.1	CCTyper	direct_repeat	9102	9130	29	+	.	ID=SEQF3617.1|RJOE01000012.1_2_REPEAT3;Parent=SEQF3617.1|RJOE01000012.1_2;Note=GTTATACCTTACCTATAAGGAATTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000012.1	CCTyper	binding_site	9131	9173	43	+	.	ID=SEQF3617.1|RJOE01000012.1_2_SPACER3;Parent=SEQF3617.1|RJOE01000012.1_2;Note=AATGTGGGTCTAGGTAATGTGGCTTCTCAACCTGACGTGAATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000012.1	CCTyper	direct_repeat	9174	9202	29	+	.	ID=SEQF3617.1|RJOE01000012.1_2_REPEAT4;Parent=SEQF3617.1|RJOE01000012.1_2;Note=GTTCTACCTTACCTATAAGGAATTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000012.1	CCTyper	binding_site	9203	9237	35	+	.	ID=SEQF3617.1|RJOE01000012.1_2_SPACER4;Parent=SEQF3617.1|RJOE01000012.1_2;Note=TCTATCTCCCACGTTAGGATATGATGAAGCAAATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000012.1	CCTyper	direct_repeat	9238	9266	29	+	.	ID=SEQF3617.1|RJOE01000012.1_2_REPEAT5;Parent=SEQF3617.1|RJOE01000012.1_2;Note=GTTATACCTTACCTATAAGGAATTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000012.1	CCTyper	binding_site	9267	9327	61	+	.	ID=SEQF3617.1|RJOE01000012.1_2_SPACER5;Parent=SEQF3617.1|RJOE01000012.1_2;Note=ATTATCTTTGGGCGACGATCTGAAGTGTCCCAGTGAGTGACTTGAACACTATAAGTTGGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000012.1	CCTyper	direct_repeat	9328	9356	29	+	.	ID=SEQF3617.1|RJOE01000012.1_2_REPEAT6;Parent=SEQF3617.1|RJOE01000012.1_2;Note=GTTATACCTTACCTATAAGGAATTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000012.1	CCTyper	binding_site	9357	9399	43	+	.	ID=SEQF3617.1|RJOE01000012.1_2_SPACER6;Parent=SEQF3617.1|RJOE01000012.1_2;Note=GCTTGTCCCCAGAGTCCGTTAGTCTCTGCGTCGAATGAGAAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000012.1	CCTyper	direct_repeat	9400	9428	29	+	.	ID=SEQF3617.1|RJOE01000012.1_2_REPEAT7;Parent=SEQF3617.1|RJOE01000012.1_2;Note=GTTCTACCTTACCTATAAGGAATTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000012.1	CCTyper	binding_site	9429	9477	49	+	.	ID=SEQF3617.1|RJOE01000012.1_2_SPACER7;Parent=SEQF3617.1|RJOE01000012.1_2;Note=TTCAGAACCCACATATAGAACTCACCTTTCGGTGACAATCCTGCTTCTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000012.1	CCTyper	direct_repeat	9478	9506	29	+	.	ID=SEQF3617.1|RJOE01000012.1_2_REPEAT8;Parent=SEQF3617.1|RJOE01000012.1_2;Note=GTTCTACCTTGCCTATAAGGAATTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000012.1	CCTyper	binding_site	9507	9552	46	+	.	ID=SEQF3617.1|RJOE01000012.1_2_SPACER8;Parent=SEQF3617.1|RJOE01000012.1_2;Note=TCACCATCGACCTTATAGTCGATGACCTGAAAATCTTCTTTTGGAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000012.1	CCTyper	direct_repeat	9553	9581	29	+	.	ID=SEQF3617.1|RJOE01000012.1_2_REPEAT9;Parent=SEQF3617.1|RJOE01000012.1_2;Note=GTTCTACCTTACCTATAAGGAATTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000012.1	CCTyper	binding_site	9582	9635	54	+	.	ID=SEQF3617.1|RJOE01000012.1_2_SPACER9;Parent=SEQF3617.1|RJOE01000012.1_2;Note=TTGCATTGTTGACAACCCGGCTGACCGTAAATTACTATATCCATTTTAAGTTCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000012.1	CCTyper	direct_repeat	9636	9664	29	+	.	ID=SEQF3617.1|RJOE01000012.1_2_REPEAT10;Parent=SEQF3617.1|RJOE01000012.1_2;Note=ACCTTACCTTACCTATAAGGAATTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000012.1	CCTyper	binding_site	9665	9708	44	+	.	ID=SEQF3617.1|RJOE01000012.1_2_SPACER10;Parent=SEQF3617.1|RJOE01000012.1_2;Note=CTCTTTGCCTTGGTTCATTTTATTTGCAATGCGATGAGCTTTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000012.1	CCTyper	direct_repeat	9709	9737	29	+	.	ID=SEQF3617.1|RJOE01000012.1_2_REPEAT11;Parent=SEQF3617.1|RJOE01000012.1_2;Note=GTTATACCTTACCTATAAGGAATTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000012.1	CCTyper	binding_site	9738	9777	40	+	.	ID=SEQF3617.1|RJOE01000012.1_2_SPACER11;Parent=SEQF3617.1|RJOE01000012.1_2;Note=AAACCAGATGGACATATAAATCCATGGTCGGCCAGCACAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000012.1	CCTyper	direct_repeat	9778	9806	29	+	.	ID=SEQF3617.1|RJOE01000012.1_2_REPEAT12;Parent=SEQF3617.1|RJOE01000012.1_2;Note=GTTATACCTTACCTATAAGGAATTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000012.1	CCTyper	binding_site	9807	9862	56	+	.	ID=SEQF3617.1|RJOE01000012.1_2_SPACER12;Parent=SEQF3617.1|RJOE01000012.1_2;Note=GAATGTTTAACTATAGAGGGATTAAATATTAAATATTGTGTTTCTAGTTTGAATTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000012.1	CCTyper	direct_repeat	9863	9891	29	+	.	ID=SEQF3617.1|RJOE01000012.1_2_REPEAT13;Parent=SEQF3617.1|RJOE01000012.1_2;Note=GTTATACCTTACCTATAAGGAATTGGTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000012.1	CCTyper	repeat_region	11964	12951	988	+	.	ID=SEQF3617.1|RJOE01000012.1_3;Genome_ID=SEQF3617.1;Note=Predictor:CCtyper;Start:11964;End:12951;Consensus_Repeat:TACCTTACCTATAAGGAATTGAGAC;Number_of_Repeats:14;Repeat_Length:25;Average_Spacer_Length:49.1;Repeat_Identity:88.4;Spacer_Identity:45.7;Spacer_Length_Sem:0.8;Trusted:True;Cas_Type_Prediction: III-B;Cas_Subtype_Prediction:III-B;Subtype_Probability:0.944;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000012.1	CCTyper	direct_repeat	11964	11988	25	+	.	ID=SEQF3617.1|RJOE01000012.1_3_REPEAT1;Parent=SEQF3617.1|RJOE01000012.1_3;Note=TACCTTACCTATAAGGAATTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000012.1	CCTyper	binding_site	11989	12038	50	+	.	ID=SEQF3617.1|RJOE01000012.1_3_SPACER1;Parent=SEQF3617.1|RJOE01000012.1_3;Note=ATCATCTCATAGACTTTTGTACGTTTTGCACCGAGAATATCGTAAAGTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000012.1	CCTyper	direct_repeat	12039	12063	25	+	.	ID=SEQF3617.1|RJOE01000012.1_3_REPEAT2;Parent=SEQF3617.1|RJOE01000012.1_3;Note=TACCTTACCTATGAGGAATTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000012.1	CCTyper	binding_site	12064	12110	47	+	.	ID=SEQF3617.1|RJOE01000012.1_3_SPACER2;Parent=SEQF3617.1|RJOE01000012.1_3;Note=GAAGCGTGAGAACTGCTATAGATCCCGCTCAAATAATTGAATTGTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000012.1	CCTyper	direct_repeat	12111	12135	25	+	.	ID=SEQF3617.1|RJOE01000012.1_3_REPEAT3;Parent=SEQF3617.1|RJOE01000012.1_3;Note=TACCTTACCTATAAGGAATTTGAGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000012.1	CCTyper	binding_site	12136	12190	55	+	.	ID=SEQF3617.1|RJOE01000012.1_3_SPACER3;Parent=SEQF3617.1|RJOE01000012.1_3;Note=CGCTGCAGATGCACCCGCTGAACCTGACGCAACTTTACGTGGTTTAGCTTCGTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000012.1	CCTyper	direct_repeat	12191	12215	25	+	.	ID=SEQF3617.1|RJOE01000012.1_3_REPEAT4;Parent=SEQF3617.1|RJOE01000012.1_3;Note=TATCTTACCTATAAGGAATTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000012.1	CCTyper	binding_site	12216	12267	52	+	.	ID=SEQF3617.1|RJOE01000012.1_3_SPACER4;Parent=SEQF3617.1|RJOE01000012.1_3;Note=TTGCTTTCGCTCGGTTTTGAAGGCTCTCCTGGCTTGTCAGGTTTTCCTGTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000012.1	CCTyper	direct_repeat	12268	12292	25	+	.	ID=SEQF3617.1|RJOE01000012.1_3_REPEAT5;Parent=SEQF3617.1|RJOE01000012.1_3;Note=TACCTTACCTATAAGGAATTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000012.1	CCTyper	binding_site	12293	12340	48	+	.	ID=SEQF3617.1|RJOE01000012.1_3_SPACER5;Parent=SEQF3617.1|RJOE01000012.1_3;Note=GTTTACCTCAATTTTTCTAAGCAATAATAAAGCATTATTTAGCAGTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000012.1	CCTyper	direct_repeat	12341	12365	25	+	.	ID=SEQF3617.1|RJOE01000012.1_3_REPEAT6;Parent=SEQF3617.1|RJOE01000012.1_3;Note=TACCTTACCTATAAGGAATTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000012.1	CCTyper	binding_site	12366	12409	44	+	.	ID=SEQF3617.1|RJOE01000012.1_3_SPACER6;Parent=SEQF3617.1|RJOE01000012.1_3;Note=GTCATATAGGGTACCTCCGTTTTAAGTCACATGGACTGATGTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000012.1	CCTyper	direct_repeat	12410	12434	25	+	.	ID=SEQF3617.1|RJOE01000012.1_3_REPEAT7;Parent=SEQF3617.1|RJOE01000012.1_3;Note=TACCTTACCTATAAGGAATTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000012.1	CCTyper	binding_site	12435	12481	47	+	.	ID=SEQF3617.1|RJOE01000012.1_3_SPACER7;Parent=SEQF3617.1|RJOE01000012.1_3;Note=ATAATAAGAGGCATAGTCACCCAATGGTAAAATTAACTTAATTGTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000012.1	CCTyper	direct_repeat	12482	12506	25	+	.	ID=SEQF3617.1|RJOE01000012.1_3_REPEAT8;Parent=SEQF3617.1|RJOE01000012.1_3;Note=TACCTTACCTATAAGGAATTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000012.1	CCTyper	binding_site	12507	12558	52	+	.	ID=SEQF3617.1|RJOE01000012.1_3_SPACER8;Parent=SEQF3617.1|RJOE01000012.1_3;Note=CTGTAGTAGACCAGCTCTCTACTTCCCTCTGTGGATTTAAACAGAAATGTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000012.1	CCTyper	direct_repeat	12559	12583	25	+	.	ID=SEQF3617.1|RJOE01000012.1_3_REPEAT9;Parent=SEQF3617.1|RJOE01000012.1_3;Note=TACCTTACCTATAAGGAATTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000012.1	CCTyper	binding_site	12584	12631	48	+	.	ID=SEQF3617.1|RJOE01000012.1_3_SPACER9;Parent=SEQF3617.1|RJOE01000012.1_3;Note=TTGATAGACTGAGTTATTTTAAGACTTCTTTCGAAGCACAAACCGTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000012.1	CCTyper	direct_repeat	12632	12656	25	+	.	ID=SEQF3617.1|RJOE01000012.1_3_REPEAT10;Parent=SEQF3617.1|RJOE01000012.1_3;Note=TACCTTACCTATAAGGAATTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000012.1	CCTyper	binding_site	12657	12706	50	+	.	ID=SEQF3617.1|RJOE01000012.1_3_SPACER10;Parent=SEQF3617.1|RJOE01000012.1_3;Note=ACTGTCTTTATTGAAAAGAGCTTCTTGTAACAACATTTTTATTACCGTAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000012.1	CCTyper	direct_repeat	12707	12731	25	+	.	ID=SEQF3617.1|RJOE01000012.1_3_REPEAT11;Parent=SEQF3617.1|RJOE01000012.1_3;Note=TACCTTACCTATAAGGAATTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000012.1	CCTyper	binding_site	12732	12781	50	+	.	ID=SEQF3617.1|RJOE01000012.1_3_SPACER11;Parent=SEQF3617.1|RJOE01000012.1_3;Note=TTTTTCAATATTTGTATTTGACATATCATAAAATTGACTAATGTATGTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000012.1	CCTyper	direct_repeat	12782	12806	25	+	.	ID=SEQF3617.1|RJOE01000012.1_3_REPEAT12;Parent=SEQF3617.1|RJOE01000012.1_3;Note=TACCTTACCTATAAGGAATTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000012.1	CCTyper	binding_site	12807	12854	48	+	.	ID=SEQF3617.1|RJOE01000012.1_3_SPACER12;Parent=SEQF3617.1|RJOE01000012.1_3;Note=GTTTCAAACTTAGGAATGTTGTTTACTACAGTTATAGTTACTTCGTAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000012.1	CCTyper	direct_repeat	12855	12879	25	+	.	ID=SEQF3617.1|RJOE01000012.1_3_REPEAT13;Parent=SEQF3617.1|RJOE01000012.1_3;Note=TACCTTACCTATAAGGAATTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000012.1	CCTyper	binding_site	12880	12926	47	+	.	ID=SEQF3617.1|RJOE01000012.1_3_SPACER13;Parent=SEQF3617.1|RJOE01000012.1_3;Note=ACTGTCTTCCATTTTAAATTATGTGGGTTTGGATGGTTTTTAAGTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000012.1	CCTyper	direct_repeat	12927	12951	25	+	.	ID=SEQF3617.1|RJOE01000012.1_3_REPEAT14;Parent=SEQF3617.1|RJOE01000012.1_3;Note=TAGATTACCTATAAAATATTGTCTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3617.1|RJOE01000012.1	CCTyper	OPERON	1	11715	11715	+	.	ID=SEQF3617.1|RJOE01000012.1@1;Genome_ID=SEQF3617.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type III-B;Complete_Interference=100%;Complete_Adaptation=NA;Best_type=III-B;Best_score=17.0;Genes=Cmr1gr7_5_CAS-III-B-III-C,Cas10_0_CAS-III,Cmr3gr5_1_CAS-III-B-III-C,Cmr4gr7_0_CAS-III-B-III-C,Cmr5gr11_1_CAS-III-B,Cmr6gr7_1_CAS-III-B-III-C,Cas1_6_CAS-I-II-III-IV-V-VI,CorA_0_CAS-III-B-III-D,Cas2_2_CAS-I-II-III-IV-V-VI;Positions=1,2,3,4,5,6,9,11,12;E-values=1.30e-26,8.00e-37,1.30e-24,2.10e-39,7.20e-35,4.50e-38,1.20e-28,2.50e-59,8.30e-27;CoverageSeq=0.658,0.758,0.51,0.675,0.949,0.755,0.932,0.909,0.862;CoverageHMM=0.3,0.777,0.654,0.61,0.985,0.904,0.388,0.837,0.962;Strand_Interference=1;Strand_Adaptation=NA
SEQF3617.1|RJOE01000012.1	CCTyper	CDS	470	2107	546	+	.	ID=SEQF3617.1|RJOE01000012.1_2_cas;Genome_ID=SEQF3617.1;Feature_type=CDS;Product=Cas Prediction : Cas10_0_CAS-III;coding_strand=+;E-value=8e-37;Score=123.9;Coverage_Seq=0.7582417582417582;Coverage_Hmm=0.776908023483366
SEQF3617.1|RJOE01000012.1	CCTyper	CDS	8391	8789	133	+	.	ID=SEQF3617.1|RJOE01000012.1_9_cas;Genome_ID=SEQF3617.1;Feature_type=CDS;Product=Cas Prediction : Cas1_6_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.2e-28;Score=97.0;Coverage_Seq=0.9323308270676691;Coverage_Hmm=0.3875
SEQF3617.1|RJOE01000012.1	CCTyper	CDS	11455	11715	87	+	.	ID=SEQF3617.1|RJOE01000012.1_12_cas;Genome_ID=SEQF3617.1;Feature_type=CDS;Product=Cas Prediction : Cas2_2_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=8.300000000000001e-27;Score=90.0;Coverage_Seq=0.8620689655172413;Coverage_Hmm=0.9620253164556962
SEQF3617.1|RJOE01000012.1	CCTyper	CDS	1	465	155	+	.	ID=SEQF3617.1|RJOE01000012.1_1_cas;Genome_ID=SEQF3617.1;Feature_type=CDS;Product=Cas Prediction : Cmr1gr7_5_CAS-III-B-III-C;coding_strand=+;E-value=1.3e-26;Score=90.7;Coverage_Seq=0.6580645161290323;Coverage_Hmm=0.3
SEQF3617.1|RJOE01000012.1	CCTyper	CDS	2107	3399	431	+	.	ID=SEQF3617.1|RJOE01000012.1_3_cas;Genome_ID=SEQF3617.1;Feature_type=CDS;Product=Cas Prediction : Cmr3gr5_1_CAS-III-B-III-C;coding_strand=+;E-value=1.2999999999999998e-24;Score=84.3;Coverage_Seq=0.5104408352668214;Coverage_Hmm=0.654320987654321
SEQF3617.1|RJOE01000012.1	CCTyper	CDS	3403	4104	234	+	.	ID=SEQF3617.1|RJOE01000012.1_4_cas;Genome_ID=SEQF3617.1;Feature_type=CDS;Product=Cas Prediction : Cmr4gr7_0_CAS-III-B-III-C;coding_strand=+;E-value=2.1e-39;Score=132.6;Coverage_Seq=0.6752136752136753;Coverage_Hmm=0.6099290780141844
SEQF3617.1|RJOE01000012.1	CCTyper	CDS	4097	4510	138	+	.	ID=SEQF3617.1|RJOE01000012.1_5_cas;Genome_ID=SEQF3617.1;Feature_type=CDS;Product=Cas Prediction : Cmr5gr11_1_CAS-III-B;coding_strand=+;E-value=7.199999999999999e-35;Score=116.5;Coverage_Seq=0.9492753623188406;Coverage_Hmm=0.9854014598540146
SEQF3617.1|RJOE01000012.1	CCTyper	CDS	4516	5322	269	+	.	ID=SEQF3617.1|RJOE01000012.1_6_cas;Genome_ID=SEQF3617.1;Feature_type=CDS;Product=Cas Prediction : Cmr6gr7_1_CAS-III-B-III-C;coding_strand=+;E-value=4.5e-38;Score=127.8;Coverage_Seq=0.7546468401486989;Coverage_Hmm=0.9036697247706422
SEQF3617.1|RJOE01000012.1	CCTyper	CDS	9979	11454	492	+	.	ID=SEQF3617.1|RJOE01000012.1_11_cas;Genome_ID=SEQF3617.1;Feature_type=CDS;Product=Cas Prediction : CorA_0_CAS-III-B-III-D;coding_strand=+;E-value=2.5e-59;Score=198.2;Coverage_Seq=0.9085365853658537;Coverage_Hmm=0.8366606170598911