SEQF3623.1|RJNS01000001.1	CCTyper	repeat_region	16	1635	1620	+	.	ID=SEQF3623.1|RJNS01000001.1_1;Genome_ID=SEQF3623.1;Note=Predictor:CCtyper;Start:16;End:1635;Consensus_Repeat:GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Number_of_Repeats:25;Repeat_Length:36;Average_Spacer_Length:30.0;Repeat_Identity:100.0;Spacer_Identity:42.7;Spacer_Length_Sem:0.1;Trusted:True;Cas_Type_Prediction: II-C;Cas_Subtype_Prediction:II-C;Subtype_Probability:0.946;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000001.1	CCTyper	direct_repeat	16	51	36	+	.	ID=SEQF3623.1|RJNS01000001.1_1_REPEAT1;Parent=SEQF3623.1|RJNS01000001.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000001.1	CCTyper	binding_site	52	81	30	+	.	ID=SEQF3623.1|RJNS01000001.1_1_SPACER1;Parent=SEQF3623.1|RJNS01000001.1_1;Note=ATTCTGGGTCAAAGACTGCACCCCCTTGTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000001.1	CCTyper	direct_repeat	82	117	36	+	.	ID=SEQF3623.1|RJNS01000001.1_1_REPEAT2;Parent=SEQF3623.1|RJNS01000001.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000001.1	CCTyper	binding_site	118	147	30	+	.	ID=SEQF3623.1|RJNS01000001.1_1_SPACER2;Parent=SEQF3623.1|RJNS01000001.1_1;Note=TCCCTAGTCCGATAGTCAATCACATCCTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000001.1	CCTyper	direct_repeat	148	183	36	+	.	ID=SEQF3623.1|RJNS01000001.1_1_REPEAT3;Parent=SEQF3623.1|RJNS01000001.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000001.1	CCTyper	binding_site	184	213	30	+	.	ID=SEQF3623.1|RJNS01000001.1_1_SPACER3;Parent=SEQF3623.1|RJNS01000001.1_1;Note=CGACTAATGGAATGATCCAAATGCAGACTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000001.1	CCTyper	direct_repeat	214	249	36	+	.	ID=SEQF3623.1|RJNS01000001.1_1_REPEAT4;Parent=SEQF3623.1|RJNS01000001.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000001.1	CCTyper	binding_site	250	279	30	+	.	ID=SEQF3623.1|RJNS01000001.1_1_SPACER4;Parent=SEQF3623.1|RJNS01000001.1_1;Note=GCTTCGCATTTAAAAAGGTAACTTCTCCGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000001.1	CCTyper	direct_repeat	280	315	36	+	.	ID=SEQF3623.1|RJNS01000001.1_1_REPEAT5;Parent=SEQF3623.1|RJNS01000001.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000001.1	CCTyper	binding_site	316	345	30	+	.	ID=SEQF3623.1|RJNS01000001.1_1_SPACER5;Parent=SEQF3623.1|RJNS01000001.1_1;Note=TTGATTGAGAGTTTAAAGCATTTCCAGTCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000001.1	CCTyper	direct_repeat	346	381	36	+	.	ID=SEQF3623.1|RJNS01000001.1_1_REPEAT6;Parent=SEQF3623.1|RJNS01000001.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000001.1	CCTyper	binding_site	382	412	31	+	.	ID=SEQF3623.1|RJNS01000001.1_1_SPACER6;Parent=SEQF3623.1|RJNS01000001.1_1;Note=CTTGTTATTGGGGCAACCTTTGAGGGTAAGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000001.1	CCTyper	direct_repeat	413	448	36	+	.	ID=SEQF3623.1|RJNS01000001.1_1_REPEAT7;Parent=SEQF3623.1|RJNS01000001.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000001.1	CCTyper	binding_site	449	478	30	+	.	ID=SEQF3623.1|RJNS01000001.1_1_SPACER7;Parent=SEQF3623.1|RJNS01000001.1_1;Note=CACCATAATTTTTTATGTATTCGTTAGCGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000001.1	CCTyper	direct_repeat	479	514	36	+	.	ID=SEQF3623.1|RJNS01000001.1_1_REPEAT8;Parent=SEQF3623.1|RJNS01000001.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000001.1	CCTyper	binding_site	515	544	30	+	.	ID=SEQF3623.1|RJNS01000001.1_1_SPACER8;Parent=SEQF3623.1|RJNS01000001.1_1;Note=CTTAAACCGCCCCTCTGGACTCTTCCAACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000001.1	CCTyper	direct_repeat	545	580	36	+	.	ID=SEQF3623.1|RJNS01000001.1_1_REPEAT9;Parent=SEQF3623.1|RJNS01000001.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000001.1	CCTyper	binding_site	581	610	30	+	.	ID=SEQF3623.1|RJNS01000001.1_1_SPACER9;Parent=SEQF3623.1|RJNS01000001.1_1;Note=ATGAGAAACACAATGGTTATACATTGTTAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000001.1	CCTyper	direct_repeat	611	646	36	+	.	ID=SEQF3623.1|RJNS01000001.1_1_REPEAT10;Parent=SEQF3623.1|RJNS01000001.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000001.1	CCTyper	binding_site	647	676	30	+	.	ID=SEQF3623.1|RJNS01000001.1_1_SPACER10;Parent=SEQF3623.1|RJNS01000001.1_1;Note=TAGATAAAATAGTGTATAATACATTATAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000001.1	CCTyper	direct_repeat	677	712	36	+	.	ID=SEQF3623.1|RJNS01000001.1_1_REPEAT11;Parent=SEQF3623.1|RJNS01000001.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000001.1	CCTyper	binding_site	713	742	30	+	.	ID=SEQF3623.1|RJNS01000001.1_1_SPACER11;Parent=SEQF3623.1|RJNS01000001.1_1;Note=TGTAAACCCTCCTCTCAATTGTGTCTTCCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000001.1	CCTyper	direct_repeat	743	778	36	+	.	ID=SEQF3623.1|RJNS01000001.1_1_REPEAT12;Parent=SEQF3623.1|RJNS01000001.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000001.1	CCTyper	binding_site	779	808	30	+	.	ID=SEQF3623.1|RJNS01000001.1_1_SPACER12;Parent=SEQF3623.1|RJNS01000001.1_1;Note=GCTCTGATTGTTGGTGCGATGCCGTCTGTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000001.1	CCTyper	direct_repeat	809	844	36	+	.	ID=SEQF3623.1|RJNS01000001.1_1_REPEAT13;Parent=SEQF3623.1|RJNS01000001.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000001.1	CCTyper	binding_site	845	874	30	+	.	ID=SEQF3623.1|RJNS01000001.1_1_SPACER13;Parent=SEQF3623.1|RJNS01000001.1_1;Note=TTCAATGAAATATCGTGAGGGCTACGAACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000001.1	CCTyper	direct_repeat	875	910	36	+	.	ID=SEQF3623.1|RJNS01000001.1_1_REPEAT14;Parent=SEQF3623.1|RJNS01000001.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000001.1	CCTyper	binding_site	911	940	30	+	.	ID=SEQF3623.1|RJNS01000001.1_1_SPACER14;Parent=SEQF3623.1|RJNS01000001.1_1;Note=AGATGATAAATGTAAACCTTGGAAACCTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000001.1	CCTyper	direct_repeat	941	976	36	+	.	ID=SEQF3623.1|RJNS01000001.1_1_REPEAT15;Parent=SEQF3623.1|RJNS01000001.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000001.1	CCTyper	binding_site	977	1006	30	+	.	ID=SEQF3623.1|RJNS01000001.1_1_SPACER15;Parent=SEQF3623.1|RJNS01000001.1_1;Note=AGAACTTCTTTTAAAGAATACTGACATTAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000001.1	CCTyper	direct_repeat	1007	1042	36	+	.	ID=SEQF3623.1|RJNS01000001.1_1_REPEAT16;Parent=SEQF3623.1|RJNS01000001.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000001.1	CCTyper	binding_site	1043	1071	29	+	.	ID=SEQF3623.1|RJNS01000001.1_1_SPACER16;Parent=SEQF3623.1|RJNS01000001.1_1;Note=TTTTCATATCCAGCCAGAGAAAAAGAGTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000001.1	CCTyper	direct_repeat	1072	1107	36	+	.	ID=SEQF3623.1|RJNS01000001.1_1_REPEAT17;Parent=SEQF3623.1|RJNS01000001.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000001.1	CCTyper	binding_site	1108	1137	30	+	.	ID=SEQF3623.1|RJNS01000001.1_1_SPACER17;Parent=SEQF3623.1|RJNS01000001.1_1;Note=TCCAAACCGATTTCCCTGTTGTAAAAGTGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000001.1	CCTyper	direct_repeat	1138	1173	36	+	.	ID=SEQF3623.1|RJNS01000001.1_1_REPEAT18;Parent=SEQF3623.1|RJNS01000001.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000001.1	CCTyper	binding_site	1174	1203	30	+	.	ID=SEQF3623.1|RJNS01000001.1_1_SPACER18;Parent=SEQF3623.1|RJNS01000001.1_1;Note=TAGAAGGTTTATATGAAGCTCTATAGCCTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000001.1	CCTyper	direct_repeat	1204	1239	36	+	.	ID=SEQF3623.1|RJNS01000001.1_1_REPEAT19;Parent=SEQF3623.1|RJNS01000001.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000001.1	CCTyper	binding_site	1240	1269	30	+	.	ID=SEQF3623.1|RJNS01000001.1_1_SPACER19;Parent=SEQF3623.1|RJNS01000001.1_1;Note=ATGTTTCAAACTAGTTCAGAAAAGTTTTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000001.1	CCTyper	direct_repeat	1270	1305	36	+	.	ID=SEQF3623.1|RJNS01000001.1_1_REPEAT20;Parent=SEQF3623.1|RJNS01000001.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000001.1	CCTyper	binding_site	1306	1335	30	+	.	ID=SEQF3623.1|RJNS01000001.1_1_SPACER20;Parent=SEQF3623.1|RJNS01000001.1_1;Note=AACTCTTTGCCATGAAATATGAAATCGTCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000001.1	CCTyper	direct_repeat	1336	1371	36	+	.	ID=SEQF3623.1|RJNS01000001.1_1_REPEAT21;Parent=SEQF3623.1|RJNS01000001.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000001.1	CCTyper	binding_site	1372	1401	30	+	.	ID=SEQF3623.1|RJNS01000001.1_1_SPACER21;Parent=SEQF3623.1|RJNS01000001.1_1;Note=AGATAAAATATAACAAAGTGGACATCTCCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000001.1	CCTyper	direct_repeat	1402	1437	36	+	.	ID=SEQF3623.1|RJNS01000001.1_1_REPEAT22;Parent=SEQF3623.1|RJNS01000001.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000001.1	CCTyper	binding_site	1438	1467	30	+	.	ID=SEQF3623.1|RJNS01000001.1_1_SPACER22;Parent=SEQF3623.1|RJNS01000001.1_1;Note=AATCTTCACAGTAGAGTCATACTTGTCTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000001.1	CCTyper	direct_repeat	1468	1503	36	+	.	ID=SEQF3623.1|RJNS01000001.1_1_REPEAT23;Parent=SEQF3623.1|RJNS01000001.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000001.1	CCTyper	binding_site	1504	1533	30	+	.	ID=SEQF3623.1|RJNS01000001.1_1_SPACER23;Parent=SEQF3623.1|RJNS01000001.1_1;Note=AGCCTCACCTTCATTGTATATTAGACCTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000001.1	CCTyper	direct_repeat	1534	1569	36	+	.	ID=SEQF3623.1|RJNS01000001.1_1_REPEAT24;Parent=SEQF3623.1|RJNS01000001.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000001.1	CCTyper	binding_site	1570	1599	30	+	.	ID=SEQF3623.1|RJNS01000001.1_1_SPACER24;Parent=SEQF3623.1|RJNS01000001.1_1;Note=CGTTTGCAACATCCAAAATATCTCTAGAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000001.1	CCTyper	direct_repeat	1600	1635	36	+	.	ID=SEQF3623.1|RJNS01000001.1_1_REPEAT25;Parent=SEQF3623.1|RJNS01000001.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000003.1	CCTyper	repeat_region	16	710	695	+	.	ID=SEQF3623.1|RJNS01000003.1_2;Genome_ID=SEQF3623.1;Note=Predictor:CCtyper;Start:16;End:710;Consensus_Repeat:GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Number_of_Repeats:11;Repeat_Length:36;Average_Spacer_Length:29.9;Repeat_Identity:100.0;Spacer_Identity:41.8;Spacer_Length_Sem:0.1;Trusted:True;Cas_Type_Prediction: II-C;Cas_Subtype_Prediction:II-C;Subtype_Probability:0.946;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000003.1	CCTyper	direct_repeat	16	51	36	+	.	ID=SEQF3623.1|RJNS01000003.1_2_REPEAT1;Parent=SEQF3623.1|RJNS01000003.1_2;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000003.1	CCTyper	binding_site	52	81	30	+	.	ID=SEQF3623.1|RJNS01000003.1_2_SPACER1;Parent=SEQF3623.1|RJNS01000003.1_2;Note=AAGTAAGGGAGAGATATTAAAATGGAATTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000003.1	CCTyper	direct_repeat	82	117	36	+	.	ID=SEQF3623.1|RJNS01000003.1_2_REPEAT2;Parent=SEQF3623.1|RJNS01000003.1_2;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000003.1	CCTyper	binding_site	118	147	30	+	.	ID=SEQF3623.1|RJNS01000003.1_2_SPACER2;Parent=SEQF3623.1|RJNS01000003.1_2;Note=CATGACCTGATTACCATCGAAGATCCTGAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000003.1	CCTyper	direct_repeat	148	183	36	+	.	ID=SEQF3623.1|RJNS01000003.1_2_REPEAT3;Parent=SEQF3623.1|RJNS01000003.1_2;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000003.1	CCTyper	binding_site	184	213	30	+	.	ID=SEQF3623.1|RJNS01000003.1_2_SPACER3;Parent=SEQF3623.1|RJNS01000003.1_2;Note=TGTTGAAGCTTTTAGTTGTGTTTTCTCATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000003.1	CCTyper	direct_repeat	214	249	36	+	.	ID=SEQF3623.1|RJNS01000003.1_2_REPEAT4;Parent=SEQF3623.1|RJNS01000003.1_2;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000003.1	CCTyper	binding_site	250	279	30	+	.	ID=SEQF3623.1|RJNS01000003.1_2_SPACER4;Parent=SEQF3623.1|RJNS01000003.1_2;Note=TCAGCTAACAATGAATTATACCGTCGCTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000003.1	CCTyper	direct_repeat	280	315	36	+	.	ID=SEQF3623.1|RJNS01000003.1_2_REPEAT5;Parent=SEQF3623.1|RJNS01000003.1_2;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000003.1	CCTyper	binding_site	316	345	30	+	.	ID=SEQF3623.1|RJNS01000003.1_2_SPACER5;Parent=SEQF3623.1|RJNS01000003.1_2;Note=TATTGAGCTCTTTCTTGAGTGACGCTAACT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000003.1	CCTyper	direct_repeat	346	381	36	+	.	ID=SEQF3623.1|RJNS01000003.1_2_REPEAT6;Parent=SEQF3623.1|RJNS01000003.1_2;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000003.1	CCTyper	binding_site	382	411	30	+	.	ID=SEQF3623.1|RJNS01000003.1_2_SPACER6;Parent=SEQF3623.1|RJNS01000003.1_2;Note=TGAGTATGGTGGTTTTATCACTACTGGTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000003.1	CCTyper	direct_repeat	412	447	36	+	.	ID=SEQF3623.1|RJNS01000003.1_2_REPEAT7;Parent=SEQF3623.1|RJNS01000003.1_2;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000003.1	CCTyper	binding_site	448	477	30	+	.	ID=SEQF3623.1|RJNS01000003.1_2_SPACER7;Parent=SEQF3623.1|RJNS01000003.1_2;Note=AAGTAGAAGCGCTGAAGAAACTAAATGACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000003.1	CCTyper	direct_repeat	478	513	36	+	.	ID=SEQF3623.1|RJNS01000003.1_2_REPEAT8;Parent=SEQF3623.1|RJNS01000003.1_2;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000003.1	CCTyper	binding_site	514	543	30	+	.	ID=SEQF3623.1|RJNS01000003.1_2_SPACER8;Parent=SEQF3623.1|RJNS01000003.1_2;Note=AACAAATTATCTGGGCAGGCGACATTGATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000003.1	CCTyper	direct_repeat	544	579	36	+	.	ID=SEQF3623.1|RJNS01000003.1_2_REPEAT9;Parent=SEQF3623.1|RJNS01000003.1_2;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000003.1	CCTyper	binding_site	580	608	29	+	.	ID=SEQF3623.1|RJNS01000003.1_2_SPACER9;Parent=SEQF3623.1|RJNS01000003.1_2;Note=AAGAACGAACTACCTCACCTGTAGACTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000003.1	CCTyper	direct_repeat	609	644	36	+	.	ID=SEQF3623.1|RJNS01000003.1_2_REPEAT10;Parent=SEQF3623.1|RJNS01000003.1_2;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000003.1	CCTyper	binding_site	645	674	30	+	.	ID=SEQF3623.1|RJNS01000003.1_2_SPACER10;Parent=SEQF3623.1|RJNS01000003.1_2;Note=ATAATCGGATTTTGGATTTTTCGCAGTTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000003.1	CCTyper	direct_repeat	675	710	36	+	.	ID=SEQF3623.1|RJNS01000003.1_2_REPEAT11;Parent=SEQF3623.1|RJNS01000003.1_2;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000018.1	CCTyper	repeat_region	16	513	498	+	.	ID=SEQF3623.1|RJNS01000018.1_3;Genome_ID=SEQF3623.1;Note=Predictor:CCtyper;Start:16;End:513;Consensus_Repeat:GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Number_of_Repeats:8;Repeat_Length:36;Average_Spacer_Length:30.0;Repeat_Identity:100.0;Spacer_Identity:43.0;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: II-C;Cas_Subtype_Prediction:II-C;Subtype_Probability:0.946;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000018.1	CCTyper	direct_repeat	16	51	36	+	.	ID=SEQF3623.1|RJNS01000018.1_3_REPEAT1;Parent=SEQF3623.1|RJNS01000018.1_3;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000018.1	CCTyper	binding_site	52	81	30	+	.	ID=SEQF3623.1|RJNS01000018.1_3_SPACER1;Parent=SEQF3623.1|RJNS01000018.1_3;Note=ATTCTGGGTCAAAGACTGCACCCCCTTGTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000018.1	CCTyper	direct_repeat	82	117	36	+	.	ID=SEQF3623.1|RJNS01000018.1_3_REPEAT2;Parent=SEQF3623.1|RJNS01000018.1_3;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000018.1	CCTyper	binding_site	118	147	30	+	.	ID=SEQF3623.1|RJNS01000018.1_3_SPACER2;Parent=SEQF3623.1|RJNS01000018.1_3;Note=TCCCTAGTCCGATAGTCAATCACATCCTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000018.1	CCTyper	direct_repeat	148	183	36	+	.	ID=SEQF3623.1|RJNS01000018.1_3_REPEAT3;Parent=SEQF3623.1|RJNS01000018.1_3;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000018.1	CCTyper	binding_site	184	213	30	+	.	ID=SEQF3623.1|RJNS01000018.1_3_SPACER3;Parent=SEQF3623.1|RJNS01000018.1_3;Note=CGACTAATGGAATGATCCAAATGCAGACTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000018.1	CCTyper	direct_repeat	214	249	36	+	.	ID=SEQF3623.1|RJNS01000018.1_3_REPEAT4;Parent=SEQF3623.1|RJNS01000018.1_3;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000018.1	CCTyper	binding_site	250	279	30	+	.	ID=SEQF3623.1|RJNS01000018.1_3_SPACER4;Parent=SEQF3623.1|RJNS01000018.1_3;Note=TATTAAGTAAGTCTAGTATCCACGACAGCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000018.1	CCTyper	direct_repeat	280	315	36	+	.	ID=SEQF3623.1|RJNS01000018.1_3_REPEAT5;Parent=SEQF3623.1|RJNS01000018.1_3;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000018.1	CCTyper	binding_site	316	345	30	+	.	ID=SEQF3623.1|RJNS01000018.1_3_SPACER5;Parent=SEQF3623.1|RJNS01000018.1_3;Note=TATGAGAAAACACAACTAAAAGCTTCAACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000018.1	CCTyper	direct_repeat	346	381	36	+	.	ID=SEQF3623.1|RJNS01000018.1_3_REPEAT6;Parent=SEQF3623.1|RJNS01000018.1_3;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000018.1	CCTyper	binding_site	382	411	30	+	.	ID=SEQF3623.1|RJNS01000018.1_3_SPACER6;Parent=SEQF3623.1|RJNS01000018.1_3;Note=TTCAGGATCTTCGATGGTAATCAGGTCATG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000018.1	CCTyper	direct_repeat	412	447	36	+	.	ID=SEQF3623.1|RJNS01000018.1_3_REPEAT7;Parent=SEQF3623.1|RJNS01000018.1_3;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000018.1	CCTyper	binding_site	448	477	30	+	.	ID=SEQF3623.1|RJNS01000018.1_3_SPACER7;Parent=SEQF3623.1|RJNS01000018.1_3;Note=TAATTCCATTTTAATATCTCTCCCTTACTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000018.1	CCTyper	direct_repeat	478	513	36	+	.	ID=SEQF3623.1|RJNS01000018.1_3_REPEAT8;Parent=SEQF3623.1|RJNS01000018.1_3;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3623.1|RJNS01000003.1	CCTyper	OPERON	781	8360	7580	-	.	ID=SEQF3623.1|RJNS01000003.1@1;Genome_ID=SEQF3623.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Csn2_2_CAS-II-A,Cas2_5_CAS-I-II-III-IV-V-VI,Cas1_4_CAS-I-II-III-IV-V-VI,Cas9_0_II,Csm2_0_IIIA;Positions=1,2,3,4,8;E-values=2.80e-142,1.10e-31,7.00e-99,2.60e-224,1.90e-04;CoverageSeq=0.994,0.954,0.911,0.753,0.663;CoverageHMM=1.0,0.888,0.996,0.976,0.5;Strand_Interference=-1;Strand_Adaptation=-1
SEQF3623.1|RJNS01000003.1	CCTyper	CDS	2149	3057	303	-	.	ID=SEQF3623.1|RJNS01000003.1_3_cas;Genome_ID=SEQF3623.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=7.0000000000000005e-99;Score=327.2;Coverage_Seq=0.9108910891089109;Coverage_Hmm=0.9963636363636363
SEQF3623.1|RJNS01000003.1	CCTyper	CDS	1821	2144	108	-	.	ID=SEQF3623.1|RJNS01000003.1_2_cas;Genome_ID=SEQF3623.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.1e-31;Score=106.2;Coverage_Seq=0.9537037037037037;Coverage_Hmm=0.8879310344827587
SEQF3623.1|RJNS01000003.1	CCTyper	CDS	3235	6600	1122	-	.	ID=SEQF3623.1|RJNS01000003.1_4_cas;Genome_ID=SEQF3623.1;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=-;E-value=2.6e-224;Score=743.9;Coverage_Seq=0.7531194295900179;Coverage_Hmm=0.9759036144578314
SEQF3623.1|RJNS01000003.1	CCTyper	CDS	8094	8360	89	-	.	ID=SEQF3623.1|RJNS01000003.1_8_cas;Genome_ID=SEQF3623.1;Feature_type=CDS;Product=Cas Prediction : Csm2_0_IIIA;coding_strand=-;E-value=0.00019;Score=19.0;Coverage_Seq=0.6629213483146067;Coverage_Hmm=0.5
SEQF3623.1|RJNS01000003.1	CCTyper	CDS	781	1824	348	-	.	ID=SEQF3623.1|RJNS01000003.1_1_cas;Genome_ID=SEQF3623.1;Feature_type=CDS;Product=Cas Prediction : Csn2_2_CAS-II-A;coding_strand=-;E-value=2.8e-142;Score=470.4;Coverage_Seq=0.9942528735632183;Coverage_Hmm=1.0